BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 004814
         (729 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  984 bits (2545), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 475/724 (65%), Positives = 583/724 (80%), Gaps = 10/724 (1%)

Query: 1   MTLCIRASKALSAHSYHYFYLKKVRFFFPFCFSVHTYPSISESNNKDSVLNPESESYYKE 60
           MTLC+RASKA  + + +     KVR  FP  FS H     S SN+      P SE+++++
Sbjct: 1   MTLCLRASKA--SATINPTRSIKVRLLFPCSFSFHD----STSNHSAP---PFSETHFQD 51

Query: 61  LIISTVEEKPWAFCNNRWVSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGV 120
           +I  ++ EKP  F N  W+S  F  V+ DP+L VRVL+  R  PR+ALR FRW E+QPG 
Sbjct: 52  VISKSIREKPSNFSNYYWLSHQFGPVIVDPDLFVRVLSSFRTSPRMALRLFRWAESQPGF 111

Query: 121 KRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLL 180
           +R EFVFC ILEIL ++ L+RSAYWV+E V+  NMH I+DVLIGG +SS VS+KILDLL+
Sbjct: 112 RRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVLIGGCVSSEVSVKILDLLI 171

Query: 181 LIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIK 240
            +Y+KKSMVEQCL VF+KM+++ L PDVKNCNRI+++LRD     KA EVYR MGEFGIK
Sbjct: 172 WVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIK 231

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P+IVTYNT+LDS+CK G++Q+ L+LL EMQ RGC+PN VTYNVLI G S+ GE EQA+GL
Sbjct: 232 PTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGL 291

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           I +MLK GLKVSA++YNP+I GY  KG+L EAL+L+EEMV +G +PT+ATYN  IYGLCK
Sbjct: 292 IGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCK 351

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            GR+SDA  +  +ML  N++PD++SYNTL+YGYCR GN+ +AFLLFDELRS  L PT+VT
Sbjct: 352 LGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVT 411

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YNTL+DGLCR G+LEVAQQLK  MIN+GI PD++TYTI+VNGSCKMG+LSMA+EFF+EML
Sbjct: 412 YNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEML 471

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            +GL+ D +AY T+I GELKLGDTS A+ LQEEMLAKGFPPDLI YNV+V GLCKLG+LE
Sbjct: 472 HEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLE 531

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA+ELL+KMV DG IPD++TYTSIIHA LE G LR+GR++F  ML KGL+P++VTYTVLI
Sbjct: 532 EASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLI 591

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
           H HA +GRLE AF+YFSEMQ KGI PNVITYN+LINGLC++RR+DQAY  F +M E+GI 
Sbjct: 592 HGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIF 651

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
           PNKY+YTILINENCN GNWQEAL LYK+MLDR ++PD CTHSA LLKQL KD K+ AV  
Sbjct: 652 PNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSA-LLKQLGKDCKLQAVRQ 710

Query: 721 LESL 724
           LESL
Sbjct: 711 LESL 714



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 70/147 (47%)

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
           +F+ M++  LSP +     ++     +  +  A   +  M   GI+P ++TYN L++  C
Sbjct: 186 VFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYC 245

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
           +  ++ Q   L  +M+  G  PN  TY +LIN     G +++A  L  EML   ++    
Sbjct: 246 KGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAY 305

Query: 700 THSALLLKQLDKDYKVHAVEYLESLTL 726
           T++ L+    +K     A+   E + L
Sbjct: 306 TYNPLIYGYFNKGMLAEALSLQEEMVL 332


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  979 bits (2531), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/718 (65%), Positives = 579/718 (80%), Gaps = 10/718 (1%)

Query: 1   MTLCIRASKALSAHSYHYFYLKKVRFFFPFCFSVHTYPSISESNNKDSVLNPESESYYKE 60
           MTLC+RASKA  + + +     KVR  FP  FS H     S SN+      P SE+++++
Sbjct: 1   MTLCLRASKA--SATINPTRSIKVRLLFPCSFSFHD----STSNHSAP---PFSETHFQD 51

Query: 61  LIISTVEEKPWAFCNNRWVSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGV 120
           +I  ++ EKP  F N  W+S  F  V+ DP+L VRVL+  R  PR+ALR FRW E+QPG 
Sbjct: 52  VISKSIREKPSNFSNYYWLSHQFGPVIVDPDLFVRVLSSFRTSPRMALRLFRWAESQPGF 111

Query: 121 KRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLL 180
           +R EFVFC ILEIL ++ L+RSAYWV+E V+  NMH I+DVLIGG +SS VS+KILDLL+
Sbjct: 112 RRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVLIGGCVSSEVSVKILDLLI 171

Query: 181 LIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIK 240
            +Y+KKSMVEQCL VF+KM+++ L PDVKNCNRI+++LRD     KA EVYR MGEFGIK
Sbjct: 172 WVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIK 231

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P+IVTYNT+LDS+CK G++Q+ L+LL EMQ RGC+PN VTYNVLI G S+ GE EQA+GL
Sbjct: 232 PTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGL 291

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           I +MLK GLKVSA++YNP+I GY  KG+L EAL+L+EEMV +G +PT+ATYN  IYGLCK
Sbjct: 292 IGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCK 351

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            GR+SDA  +  +ML  N++PD++SYNTL+YGYCR GN+ +AFLLFDELRS  L PT+VT
Sbjct: 352 LGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVT 411

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YNTL+DGLCR G+LEVAQQLK  MIN+GI PD++TYTI+VNGSCKMG+LSMA+EFF+EML
Sbjct: 412 YNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEML 471

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            +GL+ D +AY T+I GELKLGDTS A+ LQEEMLAKGFPPDLI YNV+V GLCKLG+LE
Sbjct: 472 HEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLE 531

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA+ELL+KMV DG IPD++TYTSIIHA LE G LR+GR++F  ML KGL+P++VTYTVLI
Sbjct: 532 EASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLI 591

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
           H HA +GRLE AF+YFSEMQ KGI PNVITYN+LINGLC++RR+DQAY  F +M E+GI 
Sbjct: 592 HGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIF 651

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAV 718
           PNKY+YTILINENCN GNWQEAL LYK+MLDR ++PD CTHSA LLKQL KD K+ AV
Sbjct: 652 PNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSA-LLKQLGKDCKLQAV 708



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 70/147 (47%)

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
           +F+ M++  LSP +     ++     +  +  A   +  M   GI+P ++TYN L++  C
Sbjct: 186 VFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYC 245

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
           +  ++ Q   L  +M+  G  PN  TY +LIN     G +++A  L  EML   ++    
Sbjct: 246 KGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAY 305

Query: 700 THSALLLKQLDKDYKVHAVEYLESLTL 726
           T++ L+    +K     A+   E + L
Sbjct: 306 TYNPLIYGYFNKGMLAEALSLQEEMVL 332


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  941 bits (2432), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 454/744 (61%), Positives = 574/744 (77%), Gaps = 37/744 (4%)

Query: 1   MTLCIRASKALSAHSYHYFYLK-----------KVRFFFPFCFSV-HTY-PSISESNNK- 46
           MTL +RASKAL   S                  +VRF FP   S+ H Y PSI+ S +  
Sbjct: 1   MTLSLRASKALWISSSSSSCYFYYYSFTNANTLEVRFLFPSSVSLFHNYSPSIASSKHTT 60

Query: 47  -DSVLNPESESYYKELIISTVEEKPWAFCNNRWVSDHFQAVVSDPELLVRVLNRIREKPR 105
            +S +   + + YK+LI +T++EKPWAFCN  WVSD F +V++DP+LL+RVL  IREKP 
Sbjct: 61  VESTIQSIAVAPYKDLIFNTIQEKPWAFCNQNWVSDKFNSVITDPQLLIRVLYSIREKPT 120

Query: 106 IALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGG 165
           IALRFF+ V TQPG K  E+ FC IL+IL+++ L++SAYWV+E ++   M+GI+DVLIGG
Sbjct: 121 IALRFFKCVLTQPGFKTSEYAFCAILQILVDNCLMKSAYWVMERIISFEMYGIVDVLIGG 180

Query: 166 GLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSV 225
            L+                      QCLLVF KM+RN  LPDVKNCNRI+K+LRD    V
Sbjct: 181 YLNY---------------------QCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLV 219

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           KA EVYRMMGE+GI+P++ TYNTML SFCK GE+Q AL+L+ +MQ RGC P+ VT+NVLI
Sbjct: 220 KALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLI 279

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            G S+ GEL+QA+GLI++M K GL+VS ++YNP+ICGY +KGLLVEAL L EEMVTRGV+
Sbjct: 280 NGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVS 339

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           PT+A++N ++YG CK G++SDAR +  +ML+KN++PDIISYNTL+YG+CR GNIGEAF+L
Sbjct: 340 PTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFIL 399

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
            DELR RNL   +VTYNTLIDGLCR GDLE A +LKE+MIN+GI PDV+TYT++VNG+CK
Sbjct: 400 LDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACK 459

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
           +GN+ MA+EFF+EML  GL PD+FAYT +I GELKLGDT++A++LQEEML KGFPPD+IT
Sbjct: 460 LGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVIT 519

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           YNV V+GLCKLG+LEEA ELL+KM+ DG +PDH+TYTS +HA +E G LR GR++F +ML
Sbjct: 520 YNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDML 579

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
            +G +PT+VTYTVLIHAHA  GRL+ A  YF EMQ KG+ PNVITYN LING C++R++D
Sbjct: 580 SRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMD 639

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           QA   FI+M+E+GI PNKYTYTILINENCN G WQEALRLY +ML + I PD CTH A L
Sbjct: 640 QACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGA-L 698

Query: 706 LKQLDKDYKVHAVEYLESLTLGAE 729
           LK+LDKDYKV AV+++ESL L  +
Sbjct: 699 LKKLDKDYKVQAVQFIESLILDGD 722


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  900 bits (2327), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/729 (59%), Positives = 548/729 (75%), Gaps = 31/729 (4%)

Query: 1   MTLCIRASKALSAHSYHYFYLKKVRFFFPFCFSVHTYPSISESNNKDSVLNPESESYYKE 60
           +  C+RASKA+  ++  Y +  KVR  FPF   +H+       NN  + L   SE++Y++
Sbjct: 3   LCFCVRASKAIVTNAAIYPFCFKVRRLFPFSSFLHS----CTLNNAIATL---SETHYRD 55

Query: 61  LIISTVEEKPWAFCNNRWVSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGV 120
           LI  T++EKPWAFC N WVSD F AV++DP L +RVL+ +R +PR+ALRFFRWV  QP  
Sbjct: 56  LIFDTIKEKPWAFCKNNWVSDQFGAVITDPHLFIRVLHSMRIRPRVALRFFRWVMAQPDF 115

Query: 121 KRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLL 180
           K  EFVFC IL+IL+ + L+ +AYWV+E VV   MHG++DVLI G +             
Sbjct: 116 KESEFVFCAILDILVGNDLMHAAYWVMERVVSFEMHGVVDVLIAGHVX------------ 163

Query: 181 LIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIK 240
                      CLLVF+KM+RNGLLPDVKNCNRI++VLRD     KA+ VY MM +FGIK
Sbjct: 164 -----------CLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIK 212

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P++VTYNTMLDS+CKEG + +ALELL EMQ RGC PN VTYNVL+ G S+ GELEQA+GL
Sbjct: 213 PTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGL 272

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           I +ML  GL VSA++YNP+I G+ +KGL VEA +L EEMV R   PTL+TYN L+YGLCK
Sbjct: 273 IEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCK 332

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
           W +V+  R RF +ML+    PDI+S+N+LLYGYCR+G I EAFLLFDEL+ R+LVPTV+T
Sbjct: 333 WVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVIT 392

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YNTLI GLC +G L+ A +LK+ M +QG+ PD+ TYTI+VNG  K+G +SMAR FFNEML
Sbjct: 393 YNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEML 452

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            KGL+PDRFAY T+I GE+K+ DTS A+ +QEEMLA GFPPD+ITYNV VH LC+ G+ E
Sbjct: 453 SKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFE 512

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA +LL  MV DG IPDH+TYTSII+  ++ G LR+ R++FN ML KG++P++VTYTVLI
Sbjct: 513 EACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLI 572

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
           HAHAA+  L+LAFMYFS+M  K +  NVITYNA+INGLC  RR+D+AY  F +MEE+GIL
Sbjct: 573 HAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGIL 632

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
           PNK++YTILINE+CN G W+EALRLY+EMLDR+I+PD  THS + LK L +DY+VHAV+ 
Sbjct: 633 PNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHS-VFLKNLHRDYQVHAVQC 691

Query: 721 LESLTLGAE 729
           +ESL    E
Sbjct: 692 VESLIQNVE 700


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  900 bits (2326), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/729 (59%), Positives = 548/729 (75%), Gaps = 31/729 (4%)

Query: 1   MTLCIRASKALSAHSYHYFYLKKVRFFFPFCFSVHTYPSISESNNKDSVLNPESESYYKE 60
           +  C+RASKA+  ++  Y +  KVR  FPF   +H+       NN  + L   SE++Y++
Sbjct: 3   LCFCVRASKAIVTNAAIYPFCFKVRRLFPFSSFLHS----CTLNNAIATL---SETHYRD 55

Query: 61  LIISTVEEKPWAFCNNRWVSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGV 120
           LI  T++EKPWAFC N WVSD F AV++DP L +RVL+ +R +PR+ALRFFRWV  QP  
Sbjct: 56  LIFDTIKEKPWAFCKNNWVSDQFGAVITDPHLFIRVLHSMRIRPRVALRFFRWVMAQPDF 115

Query: 121 KRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLL 180
           K  EFVFC IL+IL+ + L+ +AYWV+E VV   MHG++DVLI G +             
Sbjct: 116 KESEFVFCAILDILVGNDLMHAAYWVMERVVSFEMHGVVDVLIAGHVX------------ 163

Query: 181 LIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIK 240
                      CLLVF+KM+RNGLLPDVKNCNRI++VLRD     KA+ VY MM +FGIK
Sbjct: 164 -----------CLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIK 212

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P++VTYNTMLDS+CKEG + +ALELL EMQ RGC PN VTYNVL+ G S+ GELEQA+GL
Sbjct: 213 PTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGL 272

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           I +ML  GL VSA++YNP+I G+ +KGL VEA +L EEMV R   PTL+TYN L+YGLCK
Sbjct: 273 IEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCK 332

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
           W +V+  R RF +ML+    PDI+S+N+LLYGYCR+G I EAFLLFDEL+ R+LVPTV+T
Sbjct: 333 WVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVIT 392

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YNTLI GLC +G L+ A +LK+ M +QG+ PD+ TYTI+VNG  K+G +SMAR FFNEML
Sbjct: 393 YNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEML 452

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            KGL+PDRFAY T+I GE+K+ DTS A+ +QEEMLA GFPPD+ITYNV VH LC+ G+ E
Sbjct: 453 SKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFE 512

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA +LL  MV DG IPDH+TYTSII+  ++ G LR+ R++FN ML KG++P++VTYTVLI
Sbjct: 513 EACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLI 572

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
           HAHAA+  L+LAFMYFS+M  K +  NVITYNA+INGLC  RR+D+AY  F +MEE+GIL
Sbjct: 573 HAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGIL 632

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
           PNK++YTILINE+CN G W+EALRLY+EMLDR+I+PD  THS + LK L +DY+VHAV+ 
Sbjct: 633 PNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHS-VFLKNLHRDYQVHAVQC 691

Query: 721 LESLTLGAE 729
           +ESL    E
Sbjct: 692 VESLIQNVE 700


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  855 bits (2210), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 412/657 (62%), Positives = 522/657 (79%), Gaps = 6/657 (0%)

Query: 75  NNRWVSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEIL 134
           NN+++   F A V++P+LLVRVLN +R +P +ALRFFRW E Q G KR E  +  IL+IL
Sbjct: 35  NNKFL---FHAAVAEPKLLVRVLNTVRNRPVVALRFFRWAERQTGFKRSEISYSVILDIL 91

Query: 135 IESGLLRSAYWVVETVVCVNM-HGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCL 193
             +GL+RSAY V+E VV V M +G++DV+    +S      ILDLLL IY KKS++E+CL
Sbjct: 92  ARNGLMRSAYCVMEKVVSVKMENGVIDVVSSSEVSMPSVKLILDLLLWIYVKKSLLEKCL 151

Query: 194 LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK-AREVYRMMGEFGIKPSIVTYNTMLDS 252
           LVF KM+  GLLPDVKNCNR++++LRD   ++  AREVY +M E GI P++VTYNTMLDS
Sbjct: 152 LVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYNTMLDS 211

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
           FCK+G +QEAL+LL++MQ  GCSPN VTYNVL+ G S +GE+EQA+ LI+DML+LGL+VS
Sbjct: 212 FCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVS 271

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
            ++Y+P+I GY EKG + EA  L EEM++RG  PT+ TYN ++YGLCKWGRVSDAR    
Sbjct: 272 VYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLD 331

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
            M+ KN++PD++SYNTL+YGY R GNIGEAFLLF ELR R+L P+VVTYNTLIDGLCR G
Sbjct: 332 VMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLG 391

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
           DL+VA +LK+ MI  G  PDV T+T  V G CKMGNL MA+E F+EML +GLQPDRFAY 
Sbjct: 392 DLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYI 451

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
           T+I GELKLGD S+A+ +QEEMLA+GFPPDLITYNV + GL KLG+L+EA+EL++KM+ +
Sbjct: 452 TRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYN 511

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
           G +PDH+TYTSIIHA L  G LR+ R LF  ML KG+ P++VTYTVLIH++A RGRL+LA
Sbjct: 512 GLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLA 571

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
            ++F EM  KG+ PNVITYNALINGLC++R++DQAY  F +M+ +GI PNKYTYTILINE
Sbjct: 572 ILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINE 631

Query: 673 NCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLGAE 729
           NCN G+WQEALRLYK+MLDREI+PD CTH + LLK L+KDYK+H V +LE++    E
Sbjct: 632 NCNLGHWQEALRLYKDMLDREIQPDSCTHRS-LLKHLNKDYKLHVVRHLENVIAAGE 687


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  841 bits (2172), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/648 (63%), Positives = 514/648 (79%), Gaps = 13/648 (2%)

Query: 83  FQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRS 142
           F A V++P+LLVRVLN +R +P +ALRFFRW E Q G KR E  +  IL+IL  +GL+RS
Sbjct: 40  FHAAVAEPQLLVRVLNTVRHRPAVALRFFRWAERQTGFKRSELTYAVILDILARNGLMRS 99

Query: 143 AYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRN 202
           AY V+E VV V M            +  V + ILDLLL IY KKSM+E+CLLVF KM+  
Sbjct: 100 AYCVMEKVVSVKME-----------NGVVDVLILDLLLWIYAKKSMLEKCLLVFYKMVSK 148

Query: 203 GLLPDVKNCNRIIKVLRDNGFSVK-AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQE 261
           G+LPD+KNCNR++++LRD   S+  AREVY +M E GI+P++VTYNTMLDSFCK+G++QE
Sbjct: 149 GMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQE 208

Query: 262 ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC 321
           AL+LL +MQ  GC PN VTYNVL+ G S +GELEQA+ LI++ML+LGL+VSA++Y+P+I 
Sbjct: 209 ALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIR 268

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           GY EKG L EA  L EEM++RG  PTL TYN ++YGLCKWGRVSDAR     M+ KN++P
Sbjct: 269 GYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMP 328

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           D++SYNTL+YGY R GNIGEAFLLF ELR R LVP+VVTYNTLIDGLCR GDL+VA +LK
Sbjct: 329 DLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLK 388

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
           + MI  G  PDV T+TI+V G CK+GNL MA+E F+EML +GLQPDRFAY T+I GELKL
Sbjct: 389 DEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKL 448

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
           GD S+A+ +QEEMLA+GFPPDLITYNV + GL KLG+L+EA+EL++KM+ +G +PDH+TY
Sbjct: 449 GDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTY 508

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
           TSIIHA L  G LR+ R +F  ML KG+ P++VTYTVLIH++A RGRL+LA ++F EM  
Sbjct: 509 TSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHE 568

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
           KG+ PNVITYNALINGLC++R++DQAY  F +M+ +GI PNKYTYTILINENCN G+WQE
Sbjct: 569 KGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQE 628

Query: 682 ALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLGAE 729
           ALRLYK+MLDREI+PD CTHSA LLK L+KDYK H V +LE++    E
Sbjct: 629 ALRLYKDMLDREIQPDSCTHSA-LLKHLNKDYKSHVVRHLENVIAAGE 675


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  784 bits (2024), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/687 (55%), Positives = 515/687 (74%), Gaps = 14/687 (2%)

Query: 52  PESESYYKELIISTVEEKP----WAFCNNRWVSD----HFQAVVSDPELLVRVLNRIREK 103
           P S +++ + I  T+  KP    + F  N  + +    HF + V+ PE L+RVLN ++ +
Sbjct: 7   PSSTTFFSKTI--TLFLKPHFRFYPFSTNPQIDNSVNPHFHSAVTQPEFLLRVLNSVKHR 64

Query: 104 PRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHG-ILDVL 162
           P  ALRFFRWVE QP   R E  F  IL+IL ++G ++ AYWV+E  + V + G +LDVL
Sbjct: 65  PLTALRFFRWVEKQPNFHRSETAFVAILDILAKNGFMKPAYWVMEKAIEVKVDGGVLDVL 124

Query: 163 --IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRD 220
             IG G +S VS+K+LDLL+ ++ KK ++E+CL+VF KM+ NGLLPDV+NCNR++K+L+D
Sbjct: 125 VGIGCGRNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKD 184

Query: 221 NGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVT 280
                +  EVY +M +  I+P+IVT+NTM+DS CKEGE+  A+E+L  M+  GC PN V+
Sbjct: 185 KSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVS 244

Query: 281 YNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV 340
           YNVL+ G S  GE ++A+ LI  M  LGLKVSAH+YNP+I G+ +K +  EA +L  EM+
Sbjct: 245 YNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREML 304

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
            RG  PT+ TYN ++Y LC+ GRVSDAR     M+ ++++PD++SYNTL+YGY R GN  
Sbjct: 305 GRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFA 364

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           EA LLF ELRS+NLVP+VVTYNTLIDG CR G+L++A+ +K++MI  G+ PDV+T+TI+V
Sbjct: 365 EALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILV 424

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
            G C+MGNL MA+E F+EML +GL+PD  AYTT+I GELKLG+ S+A+ ++EEM A+GFP
Sbjct: 425 RGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFP 484

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           PDLITYNVL++GLCKLG+ ++ANEL++KM  +G +PDH+TYTSIIHA L  G LR+  ++
Sbjct: 485 PDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEV 544

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
           F++ML+KG+ P++VTYTVLIH++A RGRL+ A  YF EMQ KG+ PNVITYNALI GLC+
Sbjct: 545 FSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCK 604

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
              +D AY LF +ME +G+ PNKYTYTILINEN N   WQ+AL+LYK+MLDREI+PD CT
Sbjct: 605 ENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCT 664

Query: 701 HSALLLKQLDKDYKVHAVEYLESLTLG 727
           HSA L+K L KDYK+ AV  LE+L L 
Sbjct: 665 HSA-LMKHLSKDYKLLAVLRLENLPLA 690


>gi|147819071|emb|CAN69810.1| hypothetical protein VITISV_043106 [Vitis vinifera]
          Length = 847

 Score =  703 bits (1814), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/510 (65%), Positives = 416/510 (81%), Gaps = 1/510 (0%)

Query: 40  ISESNNKDSVLNPE-SESYYKELIISTVEEKPWAFCNNRWVSDHFQAVVSDPELLVRVLN 98
           +SE   K +V  P  SE++++++I  ++ EKP  F N  W+S  F  V+ DP+L VRVL+
Sbjct: 336 VSEEKVKVAVCTPPFSETHFQDVISKSIREKPSNFSNYYWLSHQFGPVIVDPDLFVRVLS 395

Query: 99  RIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGI 158
             R  PR+ALR FRW E+QPG +R EFVFC ILEIL ++ L+RSAYWV+E V+  NMH I
Sbjct: 396 SFRTSPRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRI 455

Query: 159 LDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL 218
           +DVLIGG +SS VS+KILDLL+ +Y+KKSMVEQCL VF+KM+++ L PDVKNCNRI+++L
Sbjct: 456 VDVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRIL 515

Query: 219 RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNG 278
           RD     KA EVYR MGEFGIKP+IVTYNT+LDS+CK G++Q+ L+LL EMQ RGC+PN 
Sbjct: 516 RDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPND 575

Query: 279 VTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
           VTYNVLI G S+ GE EQA+GLI +MLK GLKVSA++YNP+I GY  KGLL EAL+L+EE
Sbjct: 576 VTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEE 635

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
           MV +G +PT+ATYN  IYGLCK GR+SDA  +  +ML  N++PD++SYNTL+YGYCR GN
Sbjct: 636 MVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGN 695

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           + +AFLLFDELRS  L PT+VTYNTL+DGLCR G+LEVAQQLK  MIN+GI PD++TYTI
Sbjct: 696 LMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTI 755

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           +VNGSCKMG+LSMA+EFF+EML +GL+ D +AY T+I GELKLGDTS A+ LQEEMLAKG
Sbjct: 756 LVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKG 815

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRK 548
           FPPDLI YNV+V GLCKLG+LEEA+ELL+K
Sbjct: 816 FPPDLIIYNVVVDGLCKLGNLEEASELLQK 845



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/382 (32%), Positives = 197/382 (51%), Gaps = 3/382 (0%)

Query: 273 GCSPNGVTYNVL---ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLL 329
           GC  + V+  +L   I  +S+   +EQ   +   M+K  L     + N I+    +K L+
Sbjct: 462 GCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLM 521

Query: 330 VEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTL 389
            +A+ +   M   G+ PT+ TYN L+   CK G+V        EM R+   P+ ++YN L
Sbjct: 522 SKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVL 581

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
           + G  + G   +A  L  E+    L  +  TYN LI G    G L  A  L+E M+ +G 
Sbjct: 582 INGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGA 641

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
            P V TY   + G CK+G +S A +  ++ML   L PD  +Y T I G  +LG+  +A+ 
Sbjct: 642 SPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFL 701

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           L +E+ +    P ++TYN L+ GLC+ G LE A +L  +M+ +G  PD +TYT +++ S 
Sbjct: 702 LFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSC 761

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
           +MG L   ++ F+ ML +GL      Y   I      G    AF    EM  KG  P++I
Sbjct: 762 KMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLI 821

Query: 630 TYNALINGLCRLRRIDQAYGLF 651
            YN +++GLC+L  +++A  L 
Sbjct: 822 IYNVVVDGLCKLGNLEEASELL 843



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 110/346 (31%), Positives = 180/346 (52%)

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           ++LI+   K   V      F +M++  + PD+ + N +L        + +A  ++  +  
Sbjct: 474 DLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGE 533

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
             + PT+VTYNTL+D  C+ G ++    L   M  +G  P+ +TY +++NG  K G    
Sbjct: 534 FGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQ 593

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A+    EML+ GL+   + Y   I G    G  +EA  LQEEM+ KG  P + TYN  ++
Sbjct: 594 AKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIY 653

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           GLCKLG + +A + L  M+ +  +PD ++Y ++I+    +G+L +   LF+ +    L P
Sbjct: 654 GLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFP 713

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
           T+VTY  L+     +G LE+A     EM  +GI P+++TY  L+NG C++  +  A   F
Sbjct: 714 TIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFF 773

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
            +M  EG+  + Y Y   I      G+   A  L +EML +   PD
Sbjct: 774 DEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPD 819



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 181/376 (48%), Gaps = 4/376 (1%)

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDAR-HRFFEMLRKNVIPDIISY---NTLLYGY 393
           E V   +   LA  N++        RV +A  HR  ++L    +   +S    + L++ Y
Sbjct: 421 EFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVLIGGCVSSEVSVKILDLLIWVY 480

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
            +   + +   +FD++    L P V   N ++  L     +  A ++   M   GI P +
Sbjct: 481 SKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTI 540

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
           +TY  +++  CK G +    +  +EM R+G  P+   Y   I G  K G+  +A  L  E
Sbjct: 541 VTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGE 600

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           ML  G      TYN L++G    G L EA  L  +MV  G  P   TY S I+   ++G 
Sbjct: 601 MLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGR 660

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
           +       ++ML   L P +V+Y  LI+ +   G L  AF+ F E++   + P ++TYN 
Sbjct: 661 MSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNT 720

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
           L++GLCR   ++ A  L ++M  EGI P+  TYTIL+N +C  G+   A   + EML   
Sbjct: 721 LLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEG 780

Query: 694 IEPDYCTHSALLLKQL 709
           +E D   ++  ++ +L
Sbjct: 781 LELDSYAYATRIVGEL 796



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 70/147 (47%)

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
           +F+ M++  LSP +     ++     +  +  A   +  M   GI+P ++TYN L++  C
Sbjct: 492 VFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYC 551

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
           +  ++ Q   L  +M+  G  PN  TY +LIN     G +++A  L  EML   ++    
Sbjct: 552 KGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAY 611

Query: 700 THSALLLKQLDKDYKVHAVEYLESLTL 726
           T++ L+    +K     A+   E + L
Sbjct: 612 TYNPLIYGYFNKGLLAEALSLQEEMVL 638


>gi|15219974|ref|NP_173709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806406|sp|P0C7Q9.1|PPR56_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g22960, mitochondrial; Flags: Precursor
 gi|332192194|gb|AEE30315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 718

 Score =  677 bits (1748), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/730 (48%), Positives = 491/730 (67%), Gaps = 19/730 (2%)

Query: 1   MTLCIRASKALSAHSYHYFYLKKVRFFFPFCFSVHTYPSISESNNKDSVLNPESESYYKE 60
           + LC+RAS++  + S         RF F F     T P  + S+   S  +   ESYY  
Sbjct: 5   LRLCLRASRSFFSISTTNNNNNLSRFLFRFS----TLPHCAASS---SSSSSNLESYYAN 57

Query: 61  LIISTVEE--KPWAFCNNRWVSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQP 118
           LI+S+  +  KP    N +W S  F+ +++DP LL+RVLN IR KP IA RFF W++ Q 
Sbjct: 58  LILSSHGDSNKP----NRKWSSHQFRLLLTDPNLLIRVLNMIRVKPEIAFRFFNWIQRQS 113

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
            VK+    F  +LEIL E+ L+  AY V E  + + MH I D+LI G     +++K+LDL
Sbjct: 114 DVKQSRQAFAAMLEILAENDLMSEAYLVAERSIDLGMHEIDDLLIDGSFDKLIALKLLDL 173

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL +YTKKSM E+ LL F KM+R G LP V+NCN ++KVLRD+    KA  VY  M E G
Sbjct: 174 LLWVYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHG 233

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           I P+++T+NTMLDS  K G+++   ++  EM+ R    + VTYN+LI GFS+NG++E+AR
Sbjct: 234 IMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEAR 293

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
               DM + G  V+ +S+NP+I GY ++GL  +A  + +EM+  G+ PT +TYNI I  L
Sbjct: 294 RFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICAL 353

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C +GR+ DAR    E+L     PD++SYNTL++GY + G   EA LLFD+LR+ ++ P++
Sbjct: 354 CDFGRIDDAR----ELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSI 409

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           VTYNTLIDGLC  G+LE AQ+LKE M  Q I PDVITYT +V G  K GNLSMA E ++E
Sbjct: 410 VTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDE 469

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG-FPPDLITYNVLVHGLCKLG 537
           MLRKG++PD +AYTT+  GEL+LGD+ +A+RL EEM+A     PDL  YNV + GLCK+G
Sbjct: 470 MLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVG 529

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
           +L +A E  RK+   G +PDH+TYT++I   LE G  +  R+L++ MLRK L P+++TY 
Sbjct: 530 NLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYF 589

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           VLI+ HA  GRLE AF Y +EM+ +G+RPNV+T+NAL+ G+C+   ID+AY     MEEE
Sbjct: 590 VLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEE 649

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHA 717
           GI PNKY+YT+LI++NC+   W+E ++LYKEMLD+EIEPD  TH A L K L+KD++   
Sbjct: 650 GIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRA-LFKHLEKDHESRE 708

Query: 718 VEYLESLTLG 727
           VE+LE L L 
Sbjct: 709 VEFLERLLLS 718


>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1147

 Score =  674 bits (1738), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/667 (50%), Positives = 472/667 (70%), Gaps = 11/667 (1%)

Query: 55  ESYYKELIISTV-EEKPWAFCNNRWVSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRW 113
           ESYY  LI+S+  + +P    N +W S  F+ +++DP+LL+RVLN IR KP IA RFF W
Sbjct: 89  ESYYANLILSSHGDNQP----NRKWSSHQFRLLLTDPDLLIRVLNMIRVKPEIAFRFFNW 144

Query: 114 VETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSI 173
           ++ Q  VK+    F  +LEIL E+ L+  AY V E  + + MH I D+LI G     V++
Sbjct: 145 IQRQSDVKQSRQAFAAMLEILAENDLMSEAYLVAERSINLGMHEIDDLLIDGNFDKLVAL 204

Query: 174 KILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRM 233
           K+LDLLL +YTKKSM E+CLL F KM+R G LP V+NCN +++VLRD+    KA+EVY  
Sbjct: 205 KLLDLLLWVYTKKSMAEKCLLSFEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYET 264

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M   GI P+++T+NTMLDS  K G+++   ++  EM+ R    + VTYN+LI GFS++G+
Sbjct: 265 MVMHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGK 324

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           +E+AR    DM + G  V+ +S+NP+I GY ++GL  EA  + +EM+  G+ PT +TYNI
Sbjct: 325 MEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNI 384

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
            I  LC++GR+ DAR    E+L     PD++SYNTL++GY +     EA LLFD+L++ N
Sbjct: 385 YIRALCEFGRIDDAR----ELLSSMAAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGN 440

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           + P++VTYNTLIDGLC  G+LE AQ+LKE M +Q I PDVITYT ++ G  K GNLSMA 
Sbjct: 441 INPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMAT 500

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG-FPPDLITYNVLVHG 532
           E ++EMLRKG++PD +AYTT+  GEL+LGD+ +A+RL EEM+A+    PDL  YNV + G
Sbjct: 501 EIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDG 560

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           LCK+G+LE+A E  RK+   G +PDH+TYT++I   LE G  +  RDL++ ML K LSP+
Sbjct: 561 LCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPS 620

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
           ++TY VLIH HA  GRLE AF Y +EM+ +G+RPNV+T+NAL++G+C+   ID+AY    
Sbjct: 621 VITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLC 680

Query: 653 DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
            MEEEGI PNKY+YTILI+++C+   W+E ++LYKEMLD+EIEPD  TH A L K L+KD
Sbjct: 681 KMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYTHRA-LFKHLEKD 739

Query: 713 YKVHAVE 719
           ++  A++
Sbjct: 740 HESMALD 746


>gi|2462828|gb|AAB72163.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1152

 Score =  665 bits (1717), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/668 (50%), Positives = 465/668 (69%), Gaps = 12/668 (1%)

Query: 55  ESYYKELIISTVEE--KPWAFCNNRWVSDHFQAVVSDPELLVRVLNRIREKPRIALRFFR 112
           ESYY  LI+S+  +  KP    N +W S  F+ +++DP LL+RVLN IR KP IA RFF 
Sbjct: 89  ESYYANLILSSHGDSNKP----NRKWSSHQFRLLLTDPNLLIRVLNMIRVKPEIAFRFFN 144

Query: 113 WVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVS 172
           W++ Q  VK+    F  +LEIL E+ L+  AY V E  + + MH I D+LI G     ++
Sbjct: 145 WIQRQSDVKQSRQAFAAMLEILAENDLMSEAYLVAERSIDLGMHEIDDLLIDGSFDKLIA 204

Query: 173 IKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR 232
           +K+LDLLL +YTKKSM E+ LL F KM+R G LP V+NCN ++KVLRD+    KA  VY 
Sbjct: 205 LKLLDLLLWVYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYE 264

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
            M E GI P+++T+NTMLDS  K G+++   ++  EM+ R    + VTYN+LI GFS+NG
Sbjct: 265 TMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNG 324

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
           ++E+AR    DM + G  V+ +S+NP+I GY ++GL  +A  + +EM+  G+ PT +TYN
Sbjct: 325 KMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYN 384

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
           I I  LC +GR+ DAR    E+L     PD++SYNTL++GY + G   EA LLFD+LR+ 
Sbjct: 385 IYICALCDFGRIDDAR----ELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAG 440

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
           ++ P++VTYNTLIDGLC  G+LE AQ+LKE M  Q I PDVITYT +V G  K GNLSMA
Sbjct: 441 DIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMA 500

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG-FPPDLITYNVLVH 531
            E ++EMLRKG++PD +AYTT+  GEL+LGD+ +A+RL EEM+A     PDL  YNV + 
Sbjct: 501 TEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRID 560

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           GLCK+G+L +A E  RK+   G +PDH+TYT++I   LE G  +  R+L++ MLRK L P
Sbjct: 561 GLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYP 620

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
           +++TY VLI+ HA  GRLE AF Y +EM+ +G+RPNV+T+NAL+ G+C+   ID+AY   
Sbjct: 621 SVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYL 680

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDK 711
             MEEEGI PNKY+YT+LI++NC+   W+E ++LYKEMLD+EIEPD  TH A L K L+K
Sbjct: 681 CKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRA-LFKHLEK 739

Query: 712 DYKVHAVE 719
           D++  A++
Sbjct: 740 DHESMALD 747



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 81/180 (45%)

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
             KM+  GF+P       ++    +   + +   ++  M+  G+ PT++T+  ++ +   
Sbjct: 228 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 287

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
            G LE     + EM+ + I  + +TYN LING  +  ++++A     DM   G     Y+
Sbjct: 288 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 347

Query: 666 YTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
           +  LI   C  G + +A  +  EML+  I P   T++  +    D      A E L S+ 
Sbjct: 348 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA 407


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  566 bits (1458), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 302/658 (45%), Positives = 421/658 (63%), Gaps = 21/658 (3%)

Query: 90  PELLVRVLNR------IREKPRIALRFFRWVETQP-GVKRDEFVFCTILEILIESGLLRS 142
           PE L  VL        +R  P +A + FRW E  P G  R    +  +L  L E+  L +
Sbjct: 61  PEALREVLAAGDVHAALRGLPGLARQLFRWAEATPRGFPRCASAYAAVLVPLAEAKHLHA 120

Query: 143 AYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTK----------KSMVEQC 192
           A+ V    + + +   L  L+    ++     +L+LLL + TK           +    C
Sbjct: 121 AHPVSVRAIHLGLLLPLVSLLLSFPTTVSLHYLLNLLLRLSTKFNTRARNPAPSTCSTLC 180

Query: 193 LLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDS 252
           L  F +M  +G+ P +K CN +++ LRD       R VY  M + GI+PSIVTYNT+LDS
Sbjct: 181 LAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDS 240

Query: 253 FCKEGEMQEALELLWEMQGR--GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
           F +EG + +A +LL EM+ R  GC P+ VTYNV+I G +R GELE+A  L+ D +++  K
Sbjct: 241 FFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLV-DRMRMSKK 299

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
            SA ++NP+I GY  +G + +A  L+ EM   G+ PT+ TYN +I+G+ + G V  AR +
Sbjct: 300 ASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMK 359

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
           F EM    ++PD+I+YN+L+ GYC++GN+ EA  LF +L+   L P+V+TYN L+DG CR
Sbjct: 360 FVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCR 419

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
            GDLE A++ K+ M+ QG  PDV TYTI++NGS K+ NL+M REFF+EML KGLQPD FA
Sbjct: 420 LGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFA 479

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           Y T+I+ EL LG TSEA++L E M+++G   D +TYN+ + GLCK G+L++A  L  KMV
Sbjct: 480 YNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMV 539

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
            DG  PD ITYT +IHA  E G LR  RD+F+ ML  GL P+ VTYTV IHA+  RG L 
Sbjct: 540 SDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLY 599

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
            A+ +F +M  +G+RPN +TYN LI+ LCR+ R + AY  F +M E G+ PNKYTYT+LI
Sbjct: 600 SAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLI 659

Query: 671 NENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLGA 728
           + NC  GNW+EA+RLY EM    I PD+CTH+A L K  D+    HA++Y+E++ LGA
Sbjct: 660 DGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNA-LFKGFDEGQSKHAIQYMENVVLGA 716


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  557 bits (1435), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 307/659 (46%), Positives = 415/659 (62%), Gaps = 23/659 (3%)

Query: 90  PELLVRVL------NRIREKPRIALRFFRWVETQP-GVKRDEFVFCTILEILIESGLLRS 142
           PE L +VL      + +R  P +A + FRW ET P G  R    F  +L  L  +  +R+
Sbjct: 65  PEPLRQVLATGDVHSALRGLPGLARQLFRWAETTPCGFPRSASAFAAVLVPLARANHIRA 124

Query: 143 AYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKS------------MVE 190
           AY V    + + +   L  L+     S     +L LLL + TK S               
Sbjct: 125 AYPVSLRALHLGLLLPLVSLLLSAPLSPAPQSLLSLLLRLSTKYSKECTDRDATPDTCST 184

Query: 191 QCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTML 250
            CL  F++M  +G+ PDVK+CNR+++VL D         V+  M + GI+PSIVTYNT+L
Sbjct: 185 LCLSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLL 244

Query: 251 DSFCKEGEMQEALELLWEMQ--GRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           DSF KEG   +   LL EM+  G GC PN VT+NV+ITG +R G+LE+A  ++  M +L 
Sbjct: 245 DSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGM-RLS 303

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            K S+ +YNP+I G   KG + +A +L+ EM   G+ PT+ TYN +I+GL + G+V  A+
Sbjct: 304 KKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQ 363

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
            +F EM    + PD+I+YN+LL GYC++G++ EA LLF +LR   L PTV+TYN LIDG 
Sbjct: 364 VKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGY 423

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           CR GDLE A++LKE M+ QG LPDV TYTI++ GS    +L+MAREFF+EML KGLQPD 
Sbjct: 424 CRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDC 483

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
           FAY T+I  EL LG  ++A+RL+E M+ +G   D +TYN+L+ GLCK G+L +A +L  K
Sbjct: 484 FAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMK 543

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           MV +G  PD ITYT +IHA  E G LR  R  F +M+  GL+P+ VTYTV IHA+  RG 
Sbjct: 544 MVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGN 603

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           L  A+ +F +M  +G+ PN ITYN LI+ LCR  R   AY  F +M E G++PNKYTYT+
Sbjct: 604 LYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTL 663

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLG 727
           LI+ NC  GNW++A+R Y EM    I PDY TH A L K  D+ +  HA+EYLE+  LG
Sbjct: 664 LIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKA-LFKGFDEGHMNHAIEYLENAVLG 721


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  557 bits (1435), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 305/666 (45%), Positives = 420/666 (63%), Gaps = 26/666 (3%)

Query: 86  VVSDPEL---LVRVLNR------IREKPRIALRFFRWVETQP-GVKRDEFVFCTILEILI 135
           + SDP L   L RVL        +R  P +A + FRW E  P G  R    F  +L  L 
Sbjct: 50  LTSDPPLPDPLRRVLATGDVHVALRGLPGLARQLFRWAEGTPHGFPRSASAFAAVLFPLA 109

Query: 136 ESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTK---------- 185
           E+G  R+ Y V    + + +   L  LI     S  S ++L+ LL + TK          
Sbjct: 110 EAGHNRAVYPVSLRALHLGLLLPLVSLILTYPLSPTSHQLLNSLLRMSTKFSAECQAQKS 169

Query: 186 --KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
              S   QCL  F +M R+G+ P VK CN +++VLRD       R VY  M + G++PSI
Sbjct: 170 VPASCSTQCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSI 229

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGR--GCSPNGVTYNVLITGFSRNGELEQARGLI 301
            TYNT+LDSFCK G M +A+ LL +M+ R  GC PN VTYNV+I G +R GELE+A  L+
Sbjct: 230 FTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLV 289

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
            D+++L  K SA +YNP+I G   +  + +A  L  EM   G+ PT+ TYN LI GL K 
Sbjct: 290 -DIMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKT 348

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           G    A+ +F EM  K ++PD+I+YN+L+ GYC++GN+ +A  LF +L+   L PTV+TY
Sbjct: 349 GNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTY 408

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           N LIDG CR GDLE A++LKE M  +  LPDV TYTI++NGSC + NL+M R FF+EML 
Sbjct: 409 NILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLS 468

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
           KGL+PD FAY T+I+ EL +G  + A++L+EEM+ +G   D +TYNVL+ GLCK GSL++
Sbjct: 469 KGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKD 528

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A  L  KMV DG   D +TYT +IHA  E G L   +++F+ M+  GLSP++VTYT+ IH
Sbjct: 529 AYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIH 588

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
            +  RG L LA+ +F +M  +G+ PN +TYN L++ LCR+ R + AY  F +M E G++P
Sbjct: 589 TYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVP 648

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYL 721
           NKYTYT+LI+ +C  GNW  A+RLY EM  + I PD+CTH+A L K   + +   AV+YL
Sbjct: 649 NKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNA-LFKGFGEGHMYDAVQYL 707

Query: 722 ESLTLG 727
           E++ LG
Sbjct: 708 ENVVLG 713


>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
          Length = 1603

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 307/658 (46%), Positives = 417/658 (63%), Gaps = 23/658 (3%)

Query: 90   PELLVRVL------NRIREKPRIALRFFRWVETQP-GVKRDEFVFCTILEILIESGLLRS 142
            PE L +VL      + +R  P +A + FRW ET P G  R    F  +L  L  +  +R+
Sbjct: 948  PEPLRQVLATGDVHSALRGLPGLARQLFRWAETTPCGFPRSASAFAAVLIPLARANHIRA 1007

Query: 143  AYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLI--YTKKSMVEQ--------- 191
            AY V    + +++   L  L+   LS+     +  LL L   Y+K+              
Sbjct: 1008 AYPVSLRALHLDLLLPLVSLLSAPLSTAPRSLLSLLLRLSTKYSKECKARDATLDTCSTL 1067

Query: 192  CLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLD 251
            CL  F +M  +G+ PDVK+CNR+++VLRD         V+  M E GI+PSIVTYNT+LD
Sbjct: 1068 CLSAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLD 1127

Query: 252  SFCKEGEMQEALELLWEMQ--GRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
            SF KEG   +   LL EM+  G GC PN VTYNV+ITG +R G+LE+A  L+  M +L  
Sbjct: 1128 SFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGM-RLSK 1186

Query: 310  KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
            K S+ +YNP+I G   +G + +  +L+ EM   G+ PT+ TYN +I+GL + G V  A+ 
Sbjct: 1187 KASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQV 1246

Query: 370  RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
            +F EM    ++PD+I+YN+LL GYC++GN+ EA LLF +LR   L PTV+TYN LIDG C
Sbjct: 1247 KFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYC 1306

Query: 430  RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
            R GDLE A+ LKE M  QG LP+V TYTI++ GS  + +L+MAREFF+EML KGLQPD F
Sbjct: 1307 RLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCF 1366

Query: 490  AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
            AY T+I  EL LGD + A+ L+E ++ +G   D +TYN+L+HGLCK G+L++A EL  KM
Sbjct: 1367 AYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKM 1426

Query: 550  VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRL 609
            V +G  PD ITYT +IHA  E G LR  R +FNNM+  GL P+ VT+TV+IHA+  RG L
Sbjct: 1427 VSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNL 1486

Query: 610  ELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL 669
              A+ +F +M  +G+ PN ITYN LI+ LCR+ R   A   F +M E G++ NKYTYT+L
Sbjct: 1487 YSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLL 1546

Query: 670  INENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLG 727
            I+ NC  GNW++A+R Y EM    I PDY TH A LLK  D  +  H +EYL+++ LG
Sbjct: 1547 IDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKA-LLKGFDG-HVHHTIEYLDNVILG 1602


>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
 gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
          Length = 727

 Score =  553 bits (1426), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 312/661 (47%), Positives = 410/661 (62%), Gaps = 23/661 (3%)

Query: 88  SDPELLVRVLNR------IREKPRIALRFFRWVETQP-GVKRDEFVFCTILEILIESGLL 140
           + PE L +VL        +R  P +A + FRW E  P G  R    F  +L  L  +  +
Sbjct: 69  APPEPLRQVLATGDVHAALRGLPGLARQLFRWAEATPRGFPRSASAFAAVLLPLAHANHI 128

Query: 141 RSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQ--------- 191
           R+AY V    + + +   +  L+     S     +L LLL +  K S   Q         
Sbjct: 129 RAAYPVSLRALHLGLLLPVLSLLLAAPLSPALRSLLSLLLRLSAKFSAESQARDATPAAC 188

Query: 192 ---CLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
              CL  F  +  +G+ PDV++CN +++VLRD       R VYR M +  I+P+IVTYNT
Sbjct: 189 STLCLAAFRVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNT 248

Query: 249 MLDSFCKEGEMQEALELLWEM--QGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
           +LDSF KEG   EA  LL EM  QG GC  N VTYNV+I+  +R G LE A  L+ D ++
Sbjct: 249 LLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLV-DSMR 307

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
           L  K S+ +YNP+I    E+G + +   L+ EM   G+ PTL TYN +I+GL K  +V  
Sbjct: 308 LSKKASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEA 367

Query: 367 ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
           A+ +F EM    ++PD+I+YN++L GYC++GN+ EA  L  +LR   L PTV+TYNTLID
Sbjct: 368 AQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLID 427

Query: 427 GLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
           G CR G LE A++LKE M+ QG  PDV TYTI++NGS K+ NL MAREFF+EML KGLQP
Sbjct: 428 GYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQP 487

Query: 487 DRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
           D FAY T+I  EL LGDT +A++L+E M+ KG  PD +TYNV++ GLCK G+L++A +L 
Sbjct: 488 DCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLK 547

Query: 547 RKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAAR 606
            KMV DG  PD ITYT +IHA  E G L   R L N M+  GL P++VTYT+LIH    R
Sbjct: 548 MKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRR 607

Query: 607 GRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
           G L  A+ +F +M   GI PN ITYN LI+ LCR  R   AY  F +M E G+ PNKYTY
Sbjct: 608 GNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTY 667

Query: 667 TILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
           T+LI+ NC  GNW +A+RLY EM    I PDYCTH+A L K  DK +  HA+EYLE++ L
Sbjct: 668 TLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNA-LFKGFDKGHMYHAIEYLENIVL 726

Query: 727 G 727
           G
Sbjct: 727 G 727


>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
          Length = 688

 Score =  541 bits (1395), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 297/642 (46%), Positives = 404/642 (62%), Gaps = 17/642 (2%)

Query: 100 IREKPRIALRFFRWVETQP-GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGI 158
           +R  P +A + FRW ET P G  R    F  +L  L  +  +R+AY V    + +++   
Sbjct: 49  LRGLPGLARQLFRWAETTPCGFPRSASAFAAVLIPLARANHIRAAYPVSLRALHLDLLLP 108

Query: 159 LDVLIGGGLSSCVSIKILDLLLLI--YTKKSMVEQ---------CLLVFNKMLRNGLLPD 207
           L  L+   LS+     +  LL L   Y+K+              CL  F +M  +G+ PD
Sbjct: 109 LVSLLSAPLSTAPRSLLSLLLRLSTKYSKECKARDATLDTCSTLCLSAFREMASHGVAPD 168

Query: 208 VKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLW 267
           VK+CN +++ LRD         V+  M + GI+PSIVTYNT+LDSF KEG   +   LL 
Sbjct: 169 VKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLKEGRKDKVAMLLK 228

Query: 268 EMQ--GRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           EM+  G GC PN VTYNV+ITG +R G+LE+A  L+  M +L  K S+ +YNP+I G   
Sbjct: 229 EMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGM-RLSKKASSFTYNPLITGLLA 287

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
           +G + +  +L+ EM   G+ PT+ TYN +I+GL + G V  A+ +F EM    ++PD+I+
Sbjct: 288 RGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVIT 347

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           YN+LL GYC++GN+ EA LLF +LR   L PTV+TYN  IDG CR GDLE A+ LKE M 
Sbjct: 348 YNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMG 407

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
            QG LP+V TYTI++ GS  + +L+MAREFF+EML KGLQPD FAY T+I  EL LGD +
Sbjct: 408 EQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIA 467

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
            A  L+E ++ +G   D +TYN+L+HGLCK G+L++A EL  KMV +G  PD ITYT +I
Sbjct: 468 RALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLI 527

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
           HA  E G LR  R +FNNM+  GL P+ VT+TV+IHA+  RG L  A+ +F +M  +G+ 
Sbjct: 528 HAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVE 587

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           PN ITYN LI+ LCR+ R   A   F +M E G++ NKYTYT+LI+ NC  GNW++A+R 
Sbjct: 588 PNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRF 647

Query: 686 YKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLG 727
           Y EM    I PDY TH A L+K  D     H +EYL+ + LG
Sbjct: 648 YFEMHQNGIHPDYLTHKA-LVKGFDGHVH-HTIEYLDIVILG 687


>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
          Length = 721

 Score =  535 bits (1379), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 305/682 (44%), Positives = 410/682 (60%), Gaps = 31/682 (4%)

Query: 67  EEKPWAFCNNRWVSDHFQAVVSDPELLVRVLNR------IREKPRIALRFFRWVETQP-G 119
           EE P+A            +V   PE L +VL        +R  P +A + FRW E  P G
Sbjct: 50  EESPFAAL--------LASVPPPPEPLRQVLATGDVHAALRGLPGLARQLFRWAEATPRG 101

Query: 120 VKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLL 179
                  F  +L  L  +  +R+AY V    + + +   +  L+     S     ++ LL
Sbjct: 102 FPSSASAFAAVLVPLAHANHIRTAYPVSLRALRLGLLLPVLSLLLSTPLSSALRSLVSLL 161

Query: 180 LLIYTKKSMVEQ------------CLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKA 227
           L + T  S                CL  F  +  +G+ PDV++CNR+++VLRD       
Sbjct: 162 LRLSTNFSTERDTRHATPAACSTLCLAAFRLVTCHGVAPDVRDCNRVLRVLRDAARWDDV 221

Query: 228 REVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM--QGRGCSPNGVTYNVLI 285
           R VY  M +  ++P+IVTYNT+LDSF KEG   EA  LL EM  QG G S N VT+NV+I
Sbjct: 222 RAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVI 281

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
           +  +R G LE A  L+ D ++L  K S+ +YNP+I    E+G + +A  L+ EM   G+ 
Sbjct: 282 SFLAREGHLENAVKLV-DSMRLSKKASSFTYNPLITALLERGFVRKAEALQMEMENEGIM 340

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           PT+ TYN +I+GL K  +   A+ +F EM    ++PD+I+YN+LL  YC++GN+ EA  L
Sbjct: 341 PTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWL 400

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
             +LR   L PTV+TYNTLIDG CR GDL  A++LKE M+ QG  PDV TYTI++NGS K
Sbjct: 401 LGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRK 460

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
           + NL+MAREFF+EML KGLQPD FAY T+I  EL L  T  A++L+E M+ KG  PD +T
Sbjct: 461 VRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVT 520

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           YNV++ GLCK G+L++A  L  KMV DG  PD ITYT +IHA  E G LR  R L N M+
Sbjct: 521 YNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMV 580

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
             GL P++VTYT+L+H    RG L  A+ +F +M   GI PN ITYN LI+ LC   R  
Sbjct: 581 SDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTP 640

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            A+  F +M E G+ PNKYTYT+LI+ NC  GNW +A+RLY EM    I PDYCTH+A L
Sbjct: 641 LAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNA-L 699

Query: 706 LKQLDKDYKVHAVEYLESLTLG 727
            K  D+ +  HA+EY+E++ LG
Sbjct: 700 FKGFDEGHMYHAIEYMENIVLG 721


>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
          Length = 663

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 274/603 (45%), Positives = 386/603 (64%), Gaps = 22/603 (3%)

Query: 90  PELLVRVL------NRIREKPRIALRFFRWVETQP-GVKRDEFVFCTILEILIESGLLRS 142
           PE L +VL      + +R  P +A + FRW ET P G  R    F  +L  L  +  +R 
Sbjct: 59  PEPLRQVLATGDVHSALRGLPGLAHQLFRWAETTPCGFPRSASAFAAVLVPLARANHIRV 118

Query: 143 AYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQ----------- 191
           AY V    + + +   L  L+  G  +   + +L+LLL + TK S   +           
Sbjct: 119 AYPVSLRALHLGLLLPLVSLLLSGPLAPAPLSLLNLLLSLSTKYSKECKARDATPDTCST 178

Query: 192 -CLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTML 250
            CL  F +M  +G+ PDVK+CN++++VLRD         V+  M + GI+PSIVTYNT+L
Sbjct: 179 LCLSAFREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLL 238

Query: 251 DSFCKEGEMQEALELLWEMQGRG--CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           DSF KEG   +   LL EM+ RG  C PN VTYNV+I G +R G LE+A  L+ +M +L 
Sbjct: 239 DSFSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEM-RLS 297

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            K S+ +YNP+I G   +G + +  +L+ EM   G+ PT+ TYN +I+GL + G++  A+
Sbjct: 298 KKASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQ 357

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
            +F EM    ++PD+I+YN+LL GYC++GN  EA LLF +LR   L PTV+TYN LIDG 
Sbjct: 358 AKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGY 417

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           CR GDLE A++LKE M+ QG LPDV TYTI++ GS  + +L+M REFF+EML KGL+PD 
Sbjct: 418 CRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDC 477

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
           FAY T+I  E+ LGD S++++L+E ++ +G   D +TYN+L+ GLCK G+L++A EL+ +
Sbjct: 478 FAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQ 537

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M+ +G  PD ITYT +IHA  E G LR  R  FN+M+  GL P+ VTYTV+IHA+  RG 
Sbjct: 538 MISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGN 597

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           L  A+ +F +M  +G+ PN ITYN LI+ LCR+ R   AY  F +M E G++PNKYTYT+
Sbjct: 598 LYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPNKYTYTL 657

Query: 669 LIN 671
           LI+
Sbjct: 658 LID 660



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/358 (36%), Positives = 198/358 (55%)

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
           N +I  L   GF  K  ++   M   GI P++VTYN M+    + G+++ A     EM+ 
Sbjct: 306 NPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRA 365

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
            G  P+ +TYN L+ G+ + G  ++A  L  D+ + GL  +  +YN +I GY   G L E
Sbjct: 366 MGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEE 425

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
           A  L+EEMV +G  P + TY IL+ G      ++  R  F EML K + PD  +YNT + 
Sbjct: 426 ARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRIC 485

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
                G+I ++F L + +    +    VTYN LIDGLC+ G+L+ A++L   MI+ G+ P
Sbjct: 486 AEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQP 545

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           D ITYT +++  C+ G L  AR+FFN+M+  GL P    YT  I    + G+   AY   
Sbjct: 546 DCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWF 605

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
            +ML +G  P+ ITYNVL+H LC++G  + A     +M+  G +P+  TYT +I   L
Sbjct: 606 RKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPNKYTYTLLIDGKL 663



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 168/315 (53%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           +   +E     F +M   GLLPDV   N ++      G   +A  ++  +   G+ P+++
Sbjct: 349 QSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVL 408

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TYN ++D +C+ G+++EA  L  EM  +GC P+  TY +L+ G      L   R    +M
Sbjct: 409 TYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEM 468

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           L  GL+    +YN  IC     G + ++  L E ++  G++    TYNILI GLCK G +
Sbjct: 469 LSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNL 528

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            DA     +M+   + PD I+Y  L++ +C  G + EA   F+++ S  L P+ VTY  +
Sbjct: 529 KDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVI 588

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           I   CR G+L  A      M+ +G+ P+ ITY ++++  C+MG   +A   F EML +GL
Sbjct: 589 IHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGL 648

Query: 485 QPDRFAYTTQIAGEL 499
            P+++ YT  I G+L
Sbjct: 649 VPNKYTYTLLIDGKL 663



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 125/405 (30%), Positives = 185/405 (45%), Gaps = 38/405 (9%)

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
           EM + GVAP +   N ++  L    R  D      EML+  + P I++YNTLL  + + G
Sbjct: 186 EMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSKEG 245

Query: 398 NIGEAFLLFDELRSR--NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
              +  +L  E+ +R  + +P  VTYN +I GL R G LE A +L E M          T
Sbjct: 246 RKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEM-RLSKKASSFT 304

Query: 456 YTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML 515
           Y  ++ G    G +    +   EM  +G+ P    Y   I G L+ G    A     EM 
Sbjct: 305 YNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMR 364

Query: 516 AKGFPPDLITYNVLVHGLCK-----------------------------------LGSLE 540
           A G  PD+ITYN L++G CK                                   LG LE
Sbjct: 365 AMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLE 424

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA  L  +MV  G +PD  TYT ++  S  +  L   R+ F+ ML KGL P    Y   I
Sbjct: 425 EARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRI 484

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
            A    G +  +F     + ++GI  + +TYN LI+GLC+   +  A  L + M   G+ 
Sbjct: 485 CAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQ 544

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           P+  TYT LI+ +C  G  +EA + + +M+   + P   T++ ++
Sbjct: 545 PDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVII 589


>gi|414882131|tpg|DAA59262.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
          Length = 1604

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 221/484 (45%), Positives = 303/484 (62%), Gaps = 22/484 (4%)

Query: 90   PELLVRVL------NRIREKPRIALRFFRWVETQP-GVKRDEFVFCTILEILIESGLLRS 142
            PE L +VL      + +R  P +A + FRW ET P G  R    F  +L  L  +  +R+
Sbjct: 948  PEPLRQVLATGDVHSALRGLPGLARQLFRWAETTPCGFPRSASAFAAVLIPLARANHIRA 1007

Query: 143  AYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLI--YTKKSMVEQ--------- 191
            AY V    + +++   L  L+   LS+     +  LL L   Y+K+              
Sbjct: 1008 AYPVSLRALHLDLLLPLVSLLSAPLSTAPRSLLSLLLRLSTKYSKECKARDATLDTCSTL 1067

Query: 192  CLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLD 251
            CL  F +M  +G+ PDVK+CNR+++VLRD         V+  M E GI+PSIVTYNT+LD
Sbjct: 1068 CLSAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLD 1127

Query: 252  SFCKEGEMQEALELLWEMQ--GRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
            SF KEG   +   LL EM+  G GC PN VTYNV+ITG +R G+LE+A  L+  M +L  
Sbjct: 1128 SFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGM-RLSK 1186

Query: 310  KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
            K S+ +YNP+I G   +G + +  +L+ EM   G+ PT+ TYN +I+GL + G V  A+ 
Sbjct: 1187 KASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQV 1246

Query: 370  RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
            +F EM    ++PD+I+YN+LL GYC++GN+ EA LLF +LR   L PTV+TYN LIDG C
Sbjct: 1247 KFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYC 1306

Query: 430  RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
            R GDLE A+ LKE M  QG LP+V TYTI++ GS  + +L+MAREFF+EML KGLQPD F
Sbjct: 1307 RLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCF 1366

Query: 490  AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
            AY T+I  EL LGD + A+ L+E ++ +G   D +TYN+L+HGLCK G+L++A EL  KM
Sbjct: 1367 AYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKM 1426

Query: 550  V-GD 552
            V GD
Sbjct: 1427 VRGD 1430



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/355 (32%), Positives = 177/355 (49%), Gaps = 3/355 (0%)

Query: 302  RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
            R+M   G+       N ++    +     +   + EEM+  G+ P++ TYN L+    K 
Sbjct: 1073 REMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKE 1132

Query: 362  GRVSDARHRFFEMLRKN--VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
            GR         EM  +    +P+ ++YN ++ G  R G++ EA  L + +R      +  
Sbjct: 1133 GRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSF- 1191

Query: 420  TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
            TYN LI GL   G ++    L+  M N+GI+P V+TY  M++G  + G +  A+  F EM
Sbjct: 1192 TYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEM 1251

Query: 480  LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
               GL PD   Y + + G  K G+  EA  L  ++   G  P ++TYN+L+ G C+LG L
Sbjct: 1252 RAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDL 1311

Query: 540  EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
            EEA  L  +M   G +P+  TYT ++  SL +  L   R+ F+ ML KGL P    Y   
Sbjct: 1312 EEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTR 1371

Query: 600  IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
            I A    G +  AF     + ++GI  + +TYN LI+GLC+   +  A  L + M
Sbjct: 1372 ICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKM 1426



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 123/373 (32%), Positives = 176/373 (47%), Gaps = 3/373 (0%)

Query: 338  EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
            EM + GVAP +   N ++  L    R  D      EML   + P I++YNTLL  + + G
Sbjct: 1074 EMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKEG 1133

Query: 398  NIGEAFLLFDELRSRN--LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
               +  +L  E+ +R    +P  VTYN +I GL R GDLE A +L E M          T
Sbjct: 1134 RKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGM-RLSKKASSFT 1192

Query: 456  YTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML 515
            Y  ++ G    G +    +   EM  +G+ P    Y   I G L+ G    A     EM 
Sbjct: 1193 YNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMR 1252

Query: 516  AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLR 575
            A G  PD+ITYN L++G CK G+L+EA  L   +   G  P  +TY  +I     +GDL 
Sbjct: 1253 AMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLE 1312

Query: 576  RGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALI 635
              R L   M  +G  P + TYT+L+        L +A  +F EM  KG++P+   YN  I
Sbjct: 1313 EARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRI 1372

Query: 636  NGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIE 695
                 L  I +A+ L   +  EGI  +  TY ILI+  C  GN ++A  L  +M+  +  
Sbjct: 1373 CAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVRGDRW 1432

Query: 696  PDYCTHSALLLKQ 708
              +  H  L  K+
Sbjct: 1433 SSWALHFKLETKR 1445



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 169/337 (50%), Gaps = 3/337 (0%)

Query: 371  FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
            F EM    V PD+   N +L     +    +   + +E+    + P++VTYNTL+D   +
Sbjct: 1072 FREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLK 1131

Query: 431  YGDLE-VAQQLKE-NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
             G  + VA  LKE      G LP+ +TY +++ G  + G+L  A E   E +R   +   
Sbjct: 1132 EGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELV-EGMRLSKKASS 1190

Query: 489  FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
            F Y   I G L  G   + Y LQ EM  +G  P ++TYN ++HGL + G +E A     +
Sbjct: 1191 FTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAE 1250

Query: 549  MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
            M   G +PD ITY S+++   + G+L+    LF ++ R GL+PT++TY +LI  +   G 
Sbjct: 1251 MRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGD 1310

Query: 609  LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
            LE A +   EM  +G  PNV TY  L+ G   +R +  A   F +M  +G+ P+ + Y  
Sbjct: 1311 LEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNT 1370

Query: 669  LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             I      G+   A  L + ++   I  D  T++ L+
Sbjct: 1371 RICAELILGDIARAFELREVLMLEGISSDTVTYNILI 1407



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/328 (30%), Positives = 164/328 (50%), Gaps = 10/328 (3%)

Query: 406  FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
            F E+ S  + P V   N ++  L      +    + E M+  GI P ++TY  +++   K
Sbjct: 1072 FREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLK 1131

Query: 466  MGNLSMAREFFNEMLRKGLQ--PDRFAYTTQIAGELKLGDTSEAYRLQEEM-LAKGFPPD 522
             G          EM  +G    P+   Y   I G  + GD  EA  L E M L+K     
Sbjct: 1132 EGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASS- 1190

Query: 523  LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
              TYN L+ GL   G +++  +L  +M  +G +P  +TY ++IH  L+ G +   +  F 
Sbjct: 1191 -FTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFA 1249

Query: 583  NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
             M   GL P ++TY  L++ +   G L+ A + F +++  G+ P V+TYN LI+G CRL 
Sbjct: 1250 EMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLG 1309

Query: 643  RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD---YC 699
             +++A  L  +M E+G LPN  TYTIL+  + N  +   A   + EML + ++PD   Y 
Sbjct: 1310 DLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYN 1369

Query: 700  TH--SALLLKQLDKDYKVHAVEYLESLT 725
            T   + L+L  + + +++  V  LE ++
Sbjct: 1370 TRICAELILGDIARAFELREVLMLEGIS 1397


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 183/538 (34%), Positives = 303/538 (56%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           + DLL+  Y +   + +    F  +   G L  +  CN ++  L    +   A EV+R +
Sbjct: 50  VFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREV 109

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
              GI+ ++ T N M+++ CK+G+  +    L EM+G G   + VTYN LI  + R G L
Sbjct: 110 VRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLL 169

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           E+A  ++  M   GLK S  +YN II G  +KG    A  +  EM+  G++P   TYN L
Sbjct: 170 EEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTL 229

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           +   C+    S+A+  F EMLR+ V+PD++S+++L+  + R+ ++ +A + F +++   L
Sbjct: 230 LVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGL 289

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
           VP  V Y  L+ G CR G++  A ++++ M+ QG + DVI Y  ++NG CK   L+ A +
Sbjct: 290 VPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADK 349

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
            F+EM+ +G  PD + +TT I G  + G+ ++A  L   M  +   PD++ YN L+ G C
Sbjct: 350 LFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFC 409

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           K+G +E+A+EL   M+     P+HITY  +I+A   +G +     L++ M+ KG+ PTLV
Sbjct: 410 KVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLV 469

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           T   +I  +   G    A  +   M  KG+ P+ I+YN LING  R   +D+A+     M
Sbjct: 470 TCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKM 529

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
           E+EG+LP+  TY +++N  C  G  QEA  + ++M+++ I PD  T++AL+   + +D
Sbjct: 530 EKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQD 587



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 140/445 (31%), Positives = 237/445 (53%)

Query: 261 EALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII 320
           E +E L       C  N + +++LI  + +  +L +     R +   G  VS ++ N ++
Sbjct: 31  EVVEALVSSMCGNCGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLL 90

Query: 321 CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
            G  +   +  A  +  E+V  G+   + T NI++  LCK G+  D +    EM    + 
Sbjct: 91  GGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIY 150

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
            D+++YNTL+  YCR G + EAF + + +  + L P++ TYN +I+GLC+ G    A+ +
Sbjct: 151 ADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGI 210

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
              M+N G+ PD  TY  ++  SC+  N S A+E F EMLR+G+ PD  ++++ IA   +
Sbjct: 211 LIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSR 270

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
                +A     +M   G  PD + Y VL+HG C+ G++ EA ++  +M+  G + D I 
Sbjct: 271 NRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIA 330

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           Y +I++   +   L     LF+ M+ +G  P   T+T LIH H   G +  A   F  M 
Sbjct: 331 YNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMT 390

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
            + I+P+++ YN LI+G C++  +++A  L+  M    I PN  TY ILIN  C+ G+  
Sbjct: 391 QRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVS 450

Query: 681 EALRLYKEMLDREIEPDYCTHSALL 705
           EA RL+  M+++ I+P   T + ++
Sbjct: 451 EAFRLWDVMIEKGIKPTLVTCNTVI 475



 Score =  225 bits (573), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 127/403 (31%), Positives = 211/403 (52%), Gaps = 2/403 (0%)

Query: 157 GILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK 216
           GIL  ++  GLS        + LL+   ++    +   +F +MLR G++PD+ + + +I 
Sbjct: 209 GILIEMLNIGLSP--DTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIA 266

Query: 217 VLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSP 276
           V   N    +A   +R M +FG+ P  V Y  ++  +C+ G M EAL++  EM  +GC  
Sbjct: 267 VFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVL 326

Query: 277 NGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLE 336
           + + YN ++ G  +   L  A  L  +M++ G     +++  +I G+ + G + +AL+L 
Sbjct: 327 DVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLF 386

Query: 337 EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS 396
             M  R + P +  YN LI G CK G +  A   +  M+ + + P+ I+Y  L+  YC  
Sbjct: 387 GTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSV 446

Query: 397 GNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
           G++ EAF L+D +  + + PT+VT NT+I G CR GD   A +    MI +G+ PD I+Y
Sbjct: 447 GHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISY 506

Query: 457 TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA 516
             ++NG  +  N+  A  + N+M ++GL PD   Y   + G  + G   EA  +  +M+ 
Sbjct: 507 NTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIE 566

Query: 517 KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           KG  PD  TY  L++G     +L EA     +M+  GF PD +
Sbjct: 567 KGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDDV 609


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 184/567 (32%), Positives = 313/567 (55%)

Query: 158 ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
           I++ LI    +  V   + DLL+  Y +   + +    F  + R G L  +  CN ++  
Sbjct: 100 IVESLISMSSTCGVDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGG 159

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
           L   G+   A EVY  +   GI+ ++ T N M+++ CK+ ++ +    L +M+ +G   +
Sbjct: 160 LVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFAD 219

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
            VTYN LI  + R G L +A  ++  M   GLK +  +YN +I G  +KG  V A  +  
Sbjct: 220 IVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFN 279

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
           EM++ G++P   TYN L+   C+     +A+  F +ML + V PD+IS+++L+    R+G
Sbjct: 280 EMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNG 339

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
           ++ +A + F ++++  LVP  V Y  LI+G CR G +  A ++++ M+ QG   DV+ Y 
Sbjct: 340 HLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYN 399

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
            ++NG CK   L+ A   F+EM+ +G+ PD   +TT I G  K G+  +A  L   M  K
Sbjct: 400 TILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQK 459

Query: 518 GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
              PD++TYN+L+ G CK   +E+ANEL  +M+     P+HI+Y  +++    +G +   
Sbjct: 460 NIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEA 519

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
             L++ M+RKG+ PTLVT   +I  +   G L  A  +  +M  +G+ P+ ITYN LING
Sbjct: 520 FRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLING 579

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
             +   +D+A+ L   ME +G+ P+  TY +++N  C  G  QEA  + ++M++R I+PD
Sbjct: 580 FVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPD 639

Query: 698 YCTHSALLLKQLDKDYKVHAVEYLESL 724
             T++ L+   + +D    A  + + +
Sbjct: 640 RSTYTTLINGYVSQDNLKEAFRFHDEM 666



 Score = 40.4 bits (93), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 28/132 (21%), Positives = 60/132 (45%)

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
           + + +LI ++    +L      F  ++ KG   ++   N+L+ GL ++  +D A+ ++ +
Sbjct: 116 LVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNE 175

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDY 713
           +   GI  N YT  I++N  C      +      +M  + I  D  T++ L+     +  
Sbjct: 176 IARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGL 235

Query: 714 KVHAVEYLESLT 725
              A E + S++
Sbjct: 236 LGEAFEVMNSMS 247


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 200/616 (32%), Positives = 309/616 (50%), Gaps = 23/616 (3%)

Query: 106 IALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCV----NMHGILDV 161
           + L+F  W    P    D    C  L IL    L ++A  + + +       +   I   
Sbjct: 73  LTLKFLTWARNHPFF--DSHCKCLSLHILTRFKLYKTAQTLAQELALSASDPSGSSIFQC 130

Query: 162 LIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDN 221
           L         S  + DL++  Y+  +M++Q +   N    +G +P V + N ++  +  +
Sbjct: 131 LKDSYHVYNSSSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRS 190

Query: 222 GFSVK--AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGV 279
             SVK  A EVYR M    + P++ TYN ++  FC  GE+Q+ L    EM+  GC PN V
Sbjct: 191 RGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVV 250

Query: 280 TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
           TYN LI  + + G +++A GL++ M   G++ +  SYN II G   +G + EA  + EEM
Sbjct: 251 TYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEM 310

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
             +G  P   TYN L+ G CK G    A     EM+R  V P +++Y  L+   C++ N+
Sbjct: 311 GYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNL 370

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
             A   FD++R R L P   TY TLIDG  R G L  A ++   M   G  P V+TY   
Sbjct: 371 NRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAF 430

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           ++G C +  +  A     EM+ KGL PD  +Y+T I+G  + G+   A+++++EM+ KG 
Sbjct: 431 IHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGV 490

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
            PD +TY+ L+ GLC++  L EA +L ++M+  G  PD  TYT++I+A    GDL +   
Sbjct: 491 SPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALH 550

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN------- 632
           L + M+ KG  P  VTY+VLI+    + R   A     ++  +   P+ +TY+       
Sbjct: 551 LHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCS 610

Query: 633 --------ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
                   ALI G C    + +A  +F  M E    P +  Y ++I+ +C  GN  +A  
Sbjct: 611 NIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFN 670

Query: 685 LYKEMLDREIEPDYCT 700
           LYKEM+     P   T
Sbjct: 671 LYKEMIHSGFVPHTVT 686



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 150/501 (29%), Positives = 233/501 (46%), Gaps = 50/501 (9%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           + L+  Y K   +++   +   M   G+ P++ + N II  L   G   +A E+   MG 
Sbjct: 253 NTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGY 312

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G  P  VTYNT+L+ +CKEG   +AL +  EM   G SP+ VTY  LI    +   L +
Sbjct: 313 KGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNR 372

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A      M   GL+ +  +Y  +I G+S +GLL EA  +  EM   G +P++ TYN  I+
Sbjct: 373 AMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIH 432

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           G C   R+ +A     EM+ K + PD++SY+T++ G+CR G +  AF +  E+  + + P
Sbjct: 433 GHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSP 492

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
             VTY++LI GLC    L  A  L + M++ G+ PD  TYT ++N  C  G+L+ A    
Sbjct: 493 DAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLH 552

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ------------------------- 511
           +EM+ KG  PD   Y+  I G  K   T EA RL                          
Sbjct: 553 DEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNI 612

Query: 512 -------------------------EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
                                    E M+ +   P    YNV++HG C+ G+L +A  L 
Sbjct: 613 EFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLY 672

Query: 547 RKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAAR 606
           ++M+  GF+P  +T  ++I A  + G      ++  + LR           VL+  +   
Sbjct: 673 KEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKE 732

Query: 607 GRLELAFMYFSEMQVKGIRPN 627
           G +E      ++M   G+ PN
Sbjct: 733 GNMEAVLNVLTDMAKDGLLPN 753



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 112/192 (58%), Gaps = 2/192 (1%)

Query: 516 AKGFPPDLITYNVLVHGLCKL-GSLE-EANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           + GF P +++YN ++  + +  GS++  A E+ R+M+     P+  TY  +I     +G+
Sbjct: 170 SSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGE 229

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
           L++G   F  M R G  P +VTY  LI A+   GR++ AF     M  KG++PN+I+YN 
Sbjct: 230 LQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNV 289

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
           +INGLCR   + +A+ +  +M  +G  P++ TY  L+N  C  GN+ +AL ++ EM+   
Sbjct: 290 IINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNG 349

Query: 694 IEPDYCTHSALL 705
           + P   T++AL+
Sbjct: 350 VSPSVVTYTALI 361


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 204/639 (31%), Positives = 335/639 (52%), Gaps = 13/639 (2%)

Query: 89  DPELLVRVLNRIREKPRIALRFFRWVETQ-PGVKRDEFVFCTILEILIESGLLRSAYWVV 147
           D  ++V VL + RE  ++  RF   + +  P  K     F  ++ IL+ S  L  A  V+
Sbjct: 200 DSVVVVDVLYKCRENLQLGQRFIDSITSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVI 259

Query: 148 ETVVCVNMHGILDVLIGGGL----SSCVSIK-ILDLLLLIYTKKSMVEQCLLVFNKMLRN 202
             +  V   G+  V I   L     +C S   + DLL+  Y +   + +    F  +   
Sbjct: 260 --LRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSK 317

Query: 203 GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           GL   +  CN ++  L   G+   A E+Y+ +   G++ ++ T N M+++ CK  +++  
Sbjct: 318 GLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENT 377

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
              L +M+ +G  P+ VTYN LI  + R G LE+A  L+  M   GLK    +YN II G
Sbjct: 378 KSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIING 437

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
             + G  + A  + +EM+  G++P  ATYNIL+   C+   + DA   F EM  + V+PD
Sbjct: 438 LCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPD 497

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
           ++S++ L+    ++G + +A   F ++++  L P  V Y  LI G CR G +  A ++++
Sbjct: 498 LVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRD 557

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            M+ QG   DV+TY  ++NG CK   LS A E F EM  +G+ PD + +TT I G  K G
Sbjct: 558 EMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDG 617

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
           + ++A  L E M+ +   PD++TYN L+ G CK   +E+ NEL   M+     P+HI+Y 
Sbjct: 618 NMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYG 677

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
            +I+    MG +     L++ M+ KG   T++T   ++  +   G    A  + S M +K
Sbjct: 678 ILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLK 737

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
           GI P+ ITYN LING  +   +D+A+ L   ME  G+LP+  TY +++N     G  QEA
Sbjct: 738 GIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEA 797

Query: 683 LRLYKEMLDREIEPDYCTHSALL-----LKQLDKDYKVH 716
             +  +M++R + PD  T+++L+        L + ++VH
Sbjct: 798 ELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVH 836



 Score =  318 bits (816), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 178/537 (33%), Positives = 296/537 (55%), Gaps = 2/537 (0%)

Query: 161 VLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRD 220
           VL   GL  CVSI   + LL    K   V+    ++ +++R+G+  +V   N +I  L  
Sbjct: 313 VLKSKGL--CVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCK 370

Query: 221 NGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVT 280
           N      +     M E G+ P +VTYNT+++++C++G ++EA EL+  M G+G  P   T
Sbjct: 371 NQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFT 430

Query: 281 YNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV 340
           YN +I G  + G+  +A+G++ +MLK+G+     +YN ++        +++A  + +EM 
Sbjct: 431 YNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMP 490

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
           ++GV P L +++ LI  L K G +  A   F +M    + PD + Y  L+ G+CR+G + 
Sbjct: 491 SQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMS 550

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           EA  + DE+  +     VVTYNT+++GLC+   L  A +L   M  +G+ PD  T+T ++
Sbjct: 551 EALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLI 610

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
           NG  K GN++ A   F  M+++ L+PD   Y T I G  K  +  +   L  +M+++   
Sbjct: 611 NGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIY 670

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           P+ I+Y +L++G C +G + EA  L  +MV  GF    IT  +I+      G+  +  + 
Sbjct: 671 PNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEF 730

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
            +NML KG+ P  +TY  LI+       ++ AF   ++M+  G+ P+VITYN ++NG  R
Sbjct: 731 LSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSR 790

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
             R+ +A  + + M E G+ P++ TYT LIN +    N +EA R++ EML R   PD
Sbjct: 791 QGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 847



 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 141/453 (31%), Positives = 238/453 (52%)

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
           C  N + +++L+  + +  +L +     R +   GL VS ++ N ++ G  + G +  A 
Sbjct: 284 CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAW 343

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
            + +E+V  GV   + T NI+I  LCK  ++ + +    +M  K V PD+++YNTL+  Y
Sbjct: 344 EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY 403

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
           CR G + EAF L D +  + L P V TYN +I+GLC+ G    A+ + + M+  G+ PD 
Sbjct: 404 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 463

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
            TY I++   C+  N+  A   F+EM  +G+ PD  +++  I    K G   +A +   +
Sbjct: 464 ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRD 523

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           M   G  PD + Y +L+ G C+ G + EA ++  +M+  G   D +TY +I++   +   
Sbjct: 524 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKM 583

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
           L    +LF  M  +G+ P   T+T LI+ +   G +  A   F  M  + ++P+V+TYN 
Sbjct: 584 LSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNT 643

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
           LI+G C+   +++   L+ DM    I PN  +Y ILIN  CN G   EA RL+ EM+++ 
Sbjct: 644 LIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKG 703

Query: 694 IEPDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
            E    T + ++         V A E+L ++ L
Sbjct: 704 FEATIITCNTIVKGYCRAGNAVKADEFLSNMLL 736


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 204/639 (31%), Positives = 336/639 (52%), Gaps = 13/639 (2%)

Query: 89  DPELLVRVLNRIREKPRIALRFFRWVETQ-PGVKRDEFVFCTILEILIESGLLRSAYWVV 147
           D  ++V VL + RE  ++  RF   + +  P  K     F  ++ IL+ S  L  A  V+
Sbjct: 96  DSVVVVDVLYKCRENLQLGQRFIDSITSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVI 155

Query: 148 ETVVCVNMHGILDVLIGGGL----SSCVSIK-ILDLLLLIYTKKSMVEQCLLVFNKMLRN 202
             +  V   G+  V I   L     +C S   + DLL+  Y +   + +    F  +   
Sbjct: 156 --LRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSK 213

Query: 203 GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           GL   +  CN ++  L   G+   A E+Y+ +   G++ ++ T N M+++ CK  +++  
Sbjct: 214 GLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENT 273

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
              L +M+ +G  P+ VTYN LI  + R G LE+A  L+  M   GLK    +YN II G
Sbjct: 274 KSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIING 333

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
             + G  + A  + +EM+  G++P  ATYNIL+   C+   + DA   F EM  + V+PD
Sbjct: 334 LCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPD 393

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
           ++S++ L+    ++G + +A   F ++++  L P  V Y  LI G CR G +  A ++++
Sbjct: 394 LVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRD 453

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            M+ QG + DV+TY  ++NG CK   LS A E F EM  +G+ PD + +TT I G  K G
Sbjct: 454 EMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDG 513

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
           + ++A  L E M+ +   PD++TYN L+ G CK   +E+ NEL   M+     P+HI+Y 
Sbjct: 514 NMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYG 573

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
            +I+    MG +     L++ M+ KG   T++T   ++  +   G    A  + S M +K
Sbjct: 574 ILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLK 633

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
           GI P+ ITYN LING  +   +D+A+ L   ME  G+LP+  TY +++N     G  QEA
Sbjct: 634 GIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEA 693

Query: 683 LRLYKEMLDREIEPDYCTHSALL-----LKQLDKDYKVH 716
             +  +M++R + PD  T+++L+        L + ++VH
Sbjct: 694 ELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVH 732



 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 179/537 (33%), Positives = 297/537 (55%), Gaps = 2/537 (0%)

Query: 161 VLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRD 220
           VL   GL  CVSI   + LL    K   V+    ++ +++R+G+  +V   N +I  L  
Sbjct: 209 VLKSKGL--CVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCK 266

Query: 221 NGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVT 280
           N      +     M E G+ P +VTYNT+++++C++G ++EA EL+  M G+G  P   T
Sbjct: 267 NQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFT 326

Query: 281 YNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV 340
           YN +I G  + G+  +A+G++ +MLK+G+     +YN ++        +++A  + +EM 
Sbjct: 327 YNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMP 386

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
           ++GV P L +++ LI  L K G +  A   F +M    + PD + Y  L+ G+CR+G + 
Sbjct: 387 SQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMS 446

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           EA  + DE+  +  V  VVTYNT+++GLC+   L  A +L   M  +G+ PD  T+T ++
Sbjct: 447 EALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLI 506

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
           NG  K GN++ A   F  M+++ L+PD   Y T I G  K  +  +   L  +M+++   
Sbjct: 507 NGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIY 566

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           P+ I+Y +L++G C +G + EA  L  +MV  GF    IT  +I+      G+  +  + 
Sbjct: 567 PNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEF 626

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
            +NML KG+ P  +TY  LI+       ++ AF   ++M+  G+ P+VITYN ++NG  R
Sbjct: 627 LSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSR 686

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
             R+ +A  + + M E G+ P++ TYT LIN +    N +EA R++ EML R   PD
Sbjct: 687 QGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 743



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 141/453 (31%), Positives = 240/453 (52%)

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
           C  N + +++L+  + +  +L +     R +   GL VS ++ N ++ G  + G +  A 
Sbjct: 180 CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAW 239

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
            + +E+V  GV   + T NI+I  LCK  ++ + +    +M  K V PD+++YNTL+  Y
Sbjct: 240 EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY 299

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
           CR G + EAF L D +  + L P V TYN +I+GLC+ G    A+ + + M+  G+ PD 
Sbjct: 300 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 359

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
            TY I++   C+  N+  A   F+EM  +G+ PD  +++  I    K G   +A +   +
Sbjct: 360 ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRD 419

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           M   G  PD + Y +L+ G C+ G + EA ++  +M+  G + D +TY +I++   +   
Sbjct: 420 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKM 479

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
           L    +LF  M  +G+ P   T+T LI+ ++  G +  A   F  M  + ++P+V+TYN 
Sbjct: 480 LSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNT 539

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
           LI+G C+   +++   L+ DM    I PN  +Y ILIN  CN G   EA RL+ EM+++ 
Sbjct: 540 LIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKG 599

Query: 694 IEPDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
            E    T + ++         V A E+L ++ L
Sbjct: 600 FEATIITCNTIVKGYCRAGNAVKADEFLSNMLL 632


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 214/706 (30%), Positives = 333/706 (47%), Gaps = 94/706 (13%)

Query: 90  PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVET 149
           P+++  V+ +    P+  L FF WV+ Q G  +    F  +  IL  S L   A  VV  
Sbjct: 67  PDVVHSVITKQVNDPKRLLDFFNWVQFQMGFSQKLQSFSILALILCNSRLFSRADSVVNQ 126

Query: 150 VVCVNMHG---ILDVLIGGGLSSCVSIK-----------------ILDLLLLIYTKKSMV 189
           ++ ++  G   ILD LI     SC                     + +LL+  Y KK + 
Sbjct: 127 MIMMSSGGYSEILDSLI----KSCKEFDLNNVNGNENSNNNDRGVVFELLIDGYKKKGLF 182

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIK-VLRDNGFSV----------------------- 225
           ++ +  F    RNG +  +  CN ++  +L+ N   +                       
Sbjct: 183 DEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGMLEANVLHDVYTYTHL 242

Query: 226 --------KAREVYRM---MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGC 274
                    A+E  R+   M E G  PS+VTYN ++   C+ GE+ EA EL   M  +G 
Sbjct: 243 INAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGL 302

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
             +  TY++LI GF +     +A+ ++ +M   GLK    +Y  +I G+  +G   EA  
Sbjct: 303 VADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFR 362

Query: 335 LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
           ++EEM+ RGV   L TYN L+ G+CK+G +  A     EM+   + PD  +YN ++ GY 
Sbjct: 363 VKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYL 422

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
           +  N      L  E++  NLVPT  T   +I+GLCR+G +E A ++ E M++ G+ P+ +
Sbjct: 423 KEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAV 482

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
            YT ++ G  + G    A      M +KG+QPD   Y + I G  K     EA     EM
Sbjct: 483 IYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEM 542

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI--------------- 559
           + +G  P++ TY  L+HG CK G ++ A+   ++M+G G  P+ +               
Sbjct: 543 IERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGST 602

Query: 560 --------------------TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
                               TY+++IH  L  G L+   +L +  L KGL P + TY  +
Sbjct: 603 TEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSI 662

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           I     +G +  AF     M  KGI PN+ITYNALINGLC+   I++A  LF  +  +G+
Sbjct: 663 ISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGL 722

Query: 660 LPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             N  TY  +I+  C +GN  +A RL+ EM  + + PD   +SAL+
Sbjct: 723 AHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALI 768



 Score =  291 bits (745), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 167/541 (30%), Positives = 277/541 (51%), Gaps = 34/541 (6%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           M + GL+ DV   + +I          +A+ +   M   G+KP  V Y  ++D F ++G+
Sbjct: 297 MDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGD 356

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
             EA  +  EM  RG   N  TYN L+ G  + G++E+A  L+ +M+ +G+K    +YN 
Sbjct: 357 SGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNN 416

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           +I GY ++       +L  EM    + PT  T  ++I GLC+ G + DA   F  M+   
Sbjct: 417 MIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLG 476

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
           V P+ + Y TL+ G+ + G   EA  +   +  + + P V+ YN++I GLC+   +E A+
Sbjct: 477 VKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAK 536

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
                MI +G+ P+V TY  +++G CK G + +A  +F EML  G+ P+    T  I G 
Sbjct: 537 DYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGY 596

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
            K G T+EA  +   ML +   PD+ TY+ L+HGL + G L+ A ELL + +  G +PD 
Sbjct: 597 CKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDV 656

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
            TY SII    + G + +   L   M +KG+SP ++TY  LI+     G +E A   F  
Sbjct: 657 FTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDG 716

Query: 619 MQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGN 678
           +  KG+  N +TY  +I+G C+   + +A+ LF +M  +G+ P+ + Y+ LI+     GN
Sbjct: 717 IPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGN 776

Query: 679 WQEALRLY----------------------------------KEMLDREIEPDYCTHSAL 704
            ++AL L+                                  ++M+D+ ++PD+ T++ L
Sbjct: 777 TEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTIL 836

Query: 705 L 705
           +
Sbjct: 837 I 837



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 166/547 (30%), Positives = 270/547 (49%), Gaps = 9/547 (1%)

Query: 183  YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
            + ++   ++ + +   M + G+ PDV   N +I  L  +    +A++    M E G+KP+
Sbjct: 491  HVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPN 550

Query: 243  IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            + TY  ++  +CK GEMQ A     EM G G +PN V    LI G+ + G   +A  + R
Sbjct: 551  VYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFR 610

Query: 303  DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
             ML   +     +Y+ +I G    G L  A+ L  E + +G+ P + TYN +I G CK G
Sbjct: 611  CMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQG 670

Query: 363  RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
             +  A      M +K + P+II+YN L+ G C++G I  A  LFD +  + L    VTY 
Sbjct: 671  GIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYA 730

Query: 423  TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            T+IDG C+ G+L  A +L + M  +G+ PD   Y+ +++G  K GN   A   F E ++K
Sbjct: 731  TIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQK 790

Query: 483  GLQPDRFAYTTQI----AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
            G     FA T+ +     G  K G   EA +L E+M+ K   PD +TY +L+   CK G 
Sbjct: 791  G-----FASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGF 845

Query: 539  LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
            L+EA +    M     +P+ +TYT+++      G       LF+ M+ K + P  VT++V
Sbjct: 846  LKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSV 905

Query: 599  LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
            +I AH   G          +M  KG   +    + LI+ LCR   + +   +   +EE+G
Sbjct: 906  MIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQG 965

Query: 659  ILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAV 718
            +  +  T + L+     AG    A R+ K M+  +  PD    + L+  + D     +A 
Sbjct: 966  LNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLINVEQDSTDSENAG 1025

Query: 719  EYLESLT 725
            ++L+ + 
Sbjct: 1026 DFLKQMA 1032



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 178/376 (47%), Gaps = 7/376 (1%)

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           + +LI G  K G   +A   F    R   +  ++  N LL    ++  +   +  ++ + 
Sbjct: 169 FELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGML 228

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
             N++  V TY  LI+   R G+ +  ++L   M  +G  P ++TY +++ G C+ G + 
Sbjct: 229 EANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVD 288

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            A E    M +KGL  D F Y+  I G  K    +EA  + EEM +KG  P  + Y  L+
Sbjct: 289 EAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALI 348

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
            G  + G   EA  +  +M+  G   +  TY +++    + GD+ +   L N M+  G+ 
Sbjct: 349 DGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIK 408

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           P   TY  +I  +             SEM+   + P   T   +INGLCR   I+ A  +
Sbjct: 409 PDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRV 468

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL---- 706
           F  M   G+ PN   YT LI  +   G +QEA+R+ K M  + ++PD   ++++++    
Sbjct: 469 FEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCK 528

Query: 707 -KQLD--KDYKVHAVE 719
            ++++  KDY V  +E
Sbjct: 529 SRKMEEAKDYLVEMIE 544



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 161/339 (47%)

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
           + +  L+ GY + G   EA   F   +    V  ++  N L+  L +   LE+  +    
Sbjct: 167 VVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNG 226

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           M+   +L DV TYT ++N   + GN    +    EM  KG  P    Y   I G  + G+
Sbjct: 227 MLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGE 286

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
             EA+ L++ M  KG   D+ TY++L+ G  K     EA  +L +M   G  P H+ YT+
Sbjct: 287 VDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTA 346

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           +I   +  GD      +   ML +G+   L TY  L+      G +E A    +EM + G
Sbjct: 347 LIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVG 406

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
           I+P+  TYN +I G  + +   +   L  +M++  ++P  YT  ++IN  C  G+ ++A 
Sbjct: 407 IKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDAS 466

Query: 684 RLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLE 722
           R+++ M+   ++P+   ++ L+   + +     AV  L+
Sbjct: 467 RVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILK 505


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  328 bits (842), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 196/636 (30%), Positives = 331/636 (52%), Gaps = 8/636 (1%)

Query: 95  RVLNRIREKPRIALRFFRWVETQ-PGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCV 153
           +VL R R    + L+F   V    P  K        ++  L+    L  A   +  +  V
Sbjct: 105 QVLFRCRGDLHLGLKFIGLVSYHFPNFKHSSLSLSAMVHFLVRGRRLSEAQACI--LRMV 162

Query: 154 NMHGILDV-LIGGGLSSCVSIK----ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDV 208
              G+  V ++   +S+C        I DLL+  Y +   + +    F  + R G+   +
Sbjct: 163 RKSGVSRVKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSI 222

Query: 209 KNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWE 268
             CN+++  L   G+   A E+Y  +   GI+ ++ T N M+++ CK+ + +  +  L +
Sbjct: 223 NACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSD 282

Query: 269 MQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
           M+G+G   + VTYN LI  + R G +E+A  L+      G++    +YN I+ G  + G 
Sbjct: 283 MEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGK 342

Query: 329 LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNT 388
              A ++  EM+  G+ P  ATYN L+  +C+   + +A+  F EM R+ V+PD++S+++
Sbjct: 343 YDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSS 402

Query: 389 LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
           L+    R+G++ +A + F E+    +VP  V Y  LIDG CR G L  A ++++ M+ +G
Sbjct: 403 LIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARG 462

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
              DV+TY   +NG CK    + A   FNEM+ +G+ PD + +TT I G  K G+  +A 
Sbjct: 463 CFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKAL 522

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
            L E M+     PD +TYN L+ G CK G +  A EL   M+    IPDHI+Y ++++  
Sbjct: 523 NLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGF 582

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
              G L    +L + ML KG+ P LVT   LI  +   G +  A+ Y S+M   GI P+ 
Sbjct: 583 CSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDS 642

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
            +YN LI+G  +   +++A+ L  +ME+ G+  N  TY +++N  C  G  QEA ++ ++
Sbjct: 643 FSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRK 702

Query: 689 MLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           M++  I PD  T+S+L+   + +D    A  + + +
Sbjct: 703 MIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEM 738



 Score =  316 bits (809), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 175/528 (33%), Positives = 293/528 (55%), Gaps = 2/528 (0%)

Query: 171 VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL-RDNGFSVKARE 229
           VSI   + LL    +   V+    ++ +++R G+  +V   N ++  L +D  F      
Sbjct: 220 VSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFF 279

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           +  M G+ G+   IVTYNT+++++C+EG ++EA +LL     RG  P  +TYN ++ G  
Sbjct: 280 LSDMEGK-GVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLC 338

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           + G+ ++A+ ++ +ML+LGL  +A +YN ++     +  ++EA  + +EM  RGV P L 
Sbjct: 339 KIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLV 398

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           +++ LI  L + G +  A   F EM R  ++PD + Y  L+ G+CR+G + +A  + DE+
Sbjct: 399 SFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEM 458

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
            +R     VVTYNT ++GLC+      A  L   M+ +G++PD  T+T ++ G CK GN+
Sbjct: 459 LARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNM 518

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A   F  M+R  L+PD+  Y T I G  K G+   A  L ++M+ K   PD I+Y  +
Sbjct: 519 DKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTV 578

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           ++G C  G L EA  L  +M+  G  P+ +T  ++I      GD+ +  +  + M+  G+
Sbjct: 579 LNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGI 638

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
            P   +Y  LI  +     LE AF+  +EM+ +G++ N+ITYN ++NG C   ++ +A  
Sbjct: 639 IPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQ 698

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           +   M E GI P+  TY+ LIN + +  N +EA R + EML R + PD
Sbjct: 699 VLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/202 (21%), Positives = 94/202 (46%)

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
           + Y++LV    +   L E +E  + +   G          ++   +  G +    +++  
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           ++R G+   + T  ++++A     + E    + S+M+ KG+  +++TYN LIN  CR   
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGL 307

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSA 703
           +++A+ L       G+ P   TY  ++   C  G +  A  +  EML   + P+  T++ 
Sbjct: 308 VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367

Query: 704 LLLKQLDKDYKVHAVEYLESLT 725
           LL++   +D  + A E  + ++
Sbjct: 368 LLVEICRRDNILEAQEIFDEMS 389


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  328 bits (842), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 171/488 (35%), Positives = 263/488 (53%)

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M E  + P   +Y  ++D   K G++ +A +L  ++   G +P+ V Y  LI G      
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
            + AR L  DM + G   S  +YN II    ++G+L EA +L ++M+  G  P + TYN 
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           ++ GLCK GRV +A   F EM R    P+  S+NT++ G C+   I +A  +F E+ +R+
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           + P   +Y  LIDGL + G L  A +L   M++ GI P  +TY ++++G C    L  A 
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
           E F  M  KG +P RF +   I    K G   EA+RL + M   G  PD++TY+ L+ GL
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
           C +  +++A  LL  MV     P  +T  ++IH   + G ++  R++ + M+  G SP +
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
           VTY  L+H H   G+ E A    S+M  +G+ PNV+TY AL++GLC+  R+ +A G+F  
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 420

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDY 713
           M+  G  PN +TYT LI   C+AG     L+L+ EM+   I PD+  +  L  +      
Sbjct: 421 MKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGR 480

Query: 714 KVHAVEYL 721
              A+E L
Sbjct: 481 SARALEIL 488



 Score =  307 bits (786), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 164/483 (33%), Positives = 255/483 (52%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           PD  +   +I  L   G    AR++++ +   G+ PS V Y +++   C      +A EL
Sbjct: 8   PDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
             +M  RGC P+ VTYNV+I    + G LE+A  LI+ M++ G      +YN ++ G  +
Sbjct: 68  FADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 127

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
            G + EAL L  EM   G  P   ++N +I GLC+  ++  A   F EM  +++ PD  S
Sbjct: 128 SGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWS 187

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           Y  L+ G  ++G + EA+ LF  +    + P+ VTYN +I G+C    L+ A +L ++M 
Sbjct: 188 YGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMR 247

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
           ++G  P   T+ I+++  CK G +  A      M   G  PD   Y+T I+G   +    
Sbjct: 248 SKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVD 307

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           +A  L E+M+ +   P ++T N L+HGLCK G ++EA E+L  MV  G  PD +TY +++
Sbjct: 308 DARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLV 367

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
           H     G   R R+L ++M+ +GL+P +VTYT L+       RL  A   F++M+  G  
Sbjct: 368 HGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCA 427

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           PN+ TY ALI G C   ++D    LF +M   GI P+   Y  L  E C +G    AL +
Sbjct: 428 PNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEI 487

Query: 686 YKE 688
            +E
Sbjct: 488 LRE 490



 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 162/500 (32%), Positives = 248/500 (49%), Gaps = 4/500 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F  M R G  P     N II      G   +A ++ + M E G  P +VTYNT++D  C
Sbjct: 67  LFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLC 126

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K G ++EAL L  EM+  GC+PN  ++N +I G  +  +++QA  +  +M    +   + 
Sbjct: 127 KSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSW 186

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           SY  +I G ++ G L EA  L   M+  G+ P+  TYN++I+G+C    + +A   F  M
Sbjct: 187 SYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSM 246

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
             K   P   ++N L+  +C+ G + EAF L   +     VP VVTY+TLI GLC    +
Sbjct: 247 RSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARV 306

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A+ L E+M+ +   P V+T   +++G CK G +  ARE  + M+  G  PD   Y T 
Sbjct: 307 DDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTL 366

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           + G  + G T  A  L  +M+A+G  P+++TY  LV GLCK   L EA  +  +M   G 
Sbjct: 367 VHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGC 426

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            P+  TYT++I      G +  G  LF  M+  G+SP  V Y  L       GR   A  
Sbjct: 427 APNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALE 486

Query: 615 YFSEMQVKGIRPNVI---TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
              E + + +R        Y   ++GL    +++ A G   DM   G LP       L+ 
Sbjct: 487 ILREGR-ESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVA 545

Query: 672 ENCNAGNWQEALRLYKEMLD 691
             C +G   EA  + +E++D
Sbjct: 546 GLCKSGQGGEARAVLEEIMD 565



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 144/462 (31%), Positives = 243/462 (52%), Gaps = 10/462 (2%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K+ M+E+   +  KM+ +G +PDV   N ++  L  +G   +A  ++  M   G  P+  
Sbjct: 92  KRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRR 151

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           ++NT++   C++ ++ +A ++  EM+ R   P+  +Y +LI G ++ G+L +A  L R M
Sbjct: 152 SHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRM 211

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           L  G+  SA +YN +I G      L EAL L + M ++G  P+  T+NILI   CK G++
Sbjct: 212 LDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKM 271

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            +A      M     +PD+++Y+TL+ G C    + +A  L +++  R   PTVVT NTL
Sbjct: 272 DEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTL 331

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           I GLC+ G ++ A+++ + M++ G  PDV+TY  +V+G C+ G    ARE  ++M+ +GL
Sbjct: 332 IHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGL 391

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            P+   YT  ++G  K     EA  +  +M + G  P+L TY  L+ G C  G ++   +
Sbjct: 392 APNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLK 451

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV------TYTV 598
           L  +MV  G  PDH+ Y ++     + G  R  R L   +LR+G             Y  
Sbjct: 452 LFGEMVCAGISPDHVVYGTLAAELCKSG--RSARAL--EILREGRESLRSEAWGDEVYRF 507

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
            +      G++E+A  +  +M   G  P      +L+ GLC+
Sbjct: 508 AVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCK 549



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 136/449 (30%), Positives = 223/449 (49%), Gaps = 21/449 (4%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           ++L   ++S ++Q   VF++M    + PD  +   +I  L   G   +A +++R M + G
Sbjct: 156 IILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSG 215

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           I PS VTYN ++   C    + EALEL   M+ +GC P+  T+N+LI    + G++++A 
Sbjct: 216 ITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAF 275

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L++ M   G      +Y+ +I G      + +A +L E+MV R   PT+ T N LI+GL
Sbjct: 276 RLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGL 335

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           CK GR+ +AR     M+     PD+++YNTL++G+CR+G    A  L  ++ +R L P V
Sbjct: 336 CKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNV 395

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           VTY  L+ GLC+   L  A  +   M + G  P++ TYT ++ G C  G +    + F E
Sbjct: 396 VTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGE 455

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL----QEEMLAKGFPPDLITYNVLVHGLC 534
           M+  G+ PD   Y T  A   K G ++ A  +    +E + ++ +  ++  Y   V GL 
Sbjct: 456 MVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEV--YRFAVDGLL 513

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
             G +E A   +R MV  G +P      S++    + G     R +   ++         
Sbjct: 514 DAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMD-------- 565

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKG 623
               L +   ARG+   A  +  EM  KG
Sbjct: 566 ----LAYGGKARGK---AAKFVEEMVGKG 587



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 163/346 (47%), Gaps = 17/346 (4%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
            ++L+  + K+  +++   +  +M  +G +PDV   + +I  L        AR +   M 
Sbjct: 258 FNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMV 317

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
           +   KP++VT NT++   CK G ++EA E+L  M   G SP+ VTYN L+ G  R G+ E
Sbjct: 318 KRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTE 377

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
           +AR L+ DM+  GL  +  +Y  ++ G  +   L EA  +  +M + G AP L TY  LI
Sbjct: 378 RARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALI 437

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS--RN 413
            G C  G+V      F EM+   + PD + Y TL    C+SG    A  +  E R   R+
Sbjct: 438 LGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRS 497

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
                  Y   +DGL   G +E+A     +M+  G LP       +V G CK G    AR
Sbjct: 498 EAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEAR 557

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
               E++         AY  +  G        +A +  EEM+ KG+
Sbjct: 558 AVLEEIM-------DLAYGGKARG--------KAAKFVEEMVGKGY 588


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  328 bits (840), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 196/636 (30%), Positives = 331/636 (52%), Gaps = 8/636 (1%)

Query: 95  RVLNRIREKPRIALRFFRWVETQ-PGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCV 153
           +VL R R    + L+F   V    P  K        ++  L+    L  A   +  +  V
Sbjct: 105 QVLFRCRGDLHLGLKFIGLVSYHFPNFKHSSXSLSAMVHFLVRGRRLSEAQACI--LRMV 162

Query: 154 NMHGILDV-LIGGGLSSCVSIK----ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDV 208
              G+  V ++   +S+C        I DLL+  Y +   + +    F  + R G+   +
Sbjct: 163 RKSGVSRVKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSI 222

Query: 209 KNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWE 268
             CN+++  L   G+   A E+Y  +   GI+ ++ T N M+++ CK+ + +  +  L +
Sbjct: 223 NACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSD 282

Query: 269 MQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
           M+G+G   + VTYN LI  + R G +E+A  L+      G++    +YN I+ G  + G 
Sbjct: 283 MEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGK 342

Query: 329 LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNT 388
              A ++  EM+  G+ P  ATYN L+  +C+   + +A+  F EM R+ V+PD++S+++
Sbjct: 343 YDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSS 402

Query: 389 LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
           L+    R+G++ +A + F E+    +VP  V Y  LIDG CR G L  A ++++ M+ +G
Sbjct: 403 LIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARG 462

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
              DV+TY   +NG CK    + A   FNEM+ +G+ PD + +TT I G  K G+  +A 
Sbjct: 463 CFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKAL 522

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
            L E M+     PD +TYN L+ G CK G +  A EL   M+    IPDHI+Y ++++  
Sbjct: 523 NLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGF 582

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
              G L    +L + ML KG+ P LVT   LI  +   G +  A+ Y S+M   GI P+ 
Sbjct: 583 CSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDS 642

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
            +YN LI+G  +   +++A+ L  +ME+ G+  N  TY +++N  C  G  QEA ++ ++
Sbjct: 643 FSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRK 702

Query: 689 MLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           M++  I PD  T+S+L+   + +D    A  + + +
Sbjct: 703 MIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEM 738



 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 175/528 (33%), Positives = 293/528 (55%), Gaps = 2/528 (0%)

Query: 171 VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL-RDNGFSVKARE 229
           VSI   + LL    +   V+    ++ +++R G+  +V   N ++  L +D  F      
Sbjct: 220 VSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFF 279

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           +  M G+ G+   IVTYNT+++++C+EG ++EA +LL     RG  P  +TYN ++ G  
Sbjct: 280 LSDMEGK-GVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLC 338

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           + G+ ++A+ ++ +ML+LGL  +A +YN ++     +  ++EA  + +EM  RGV P L 
Sbjct: 339 KIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLV 398

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           +++ LI  L + G +  A   F EM R  ++PD + Y  L+ G+CR+G + +A  + DE+
Sbjct: 399 SFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEM 458

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
            +R     VVTYNT ++GLC+      A  L   M+ +G++PD  T+T ++ G CK GN+
Sbjct: 459 LARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNM 518

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A   F  M+R  L+PD+  Y T I G  K G+   A  L ++M+ K   PD I+Y  +
Sbjct: 519 DKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTV 578

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           ++G C  G L EA  L  +M+  G  P+ +T  ++I      GD+ +  +  + M+  G+
Sbjct: 579 LNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGI 638

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
            P   +Y  LI  +     LE AF+  +EM+ +G++ N+ITYN ++NG C   ++ +A  
Sbjct: 639 IPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQ 698

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           +   M E GI P+  TY+ LIN + +  N +EA R + EML R + PD
Sbjct: 699 VLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/202 (21%), Positives = 94/202 (46%)

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
           + Y++LV    +   L E +E  + +   G          ++   +  G +    +++  
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           ++R G+   + T  ++++A     + E    + S+M+ KG+  +++TYN LIN  CR   
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGL 307

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSA 703
           +++A+ L       G+ P   TY  ++   C  G +  A  +  EML   + P+  T++ 
Sbjct: 308 VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367

Query: 704 LLLKQLDKDYKVHAVEYLESLT 725
           LL++   +D  + A E  + ++
Sbjct: 368 LLVEICRRDNILEAQEIFDEMS 389


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  328 bits (840), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 199/626 (31%), Positives = 329/626 (52%), Gaps = 49/626 (7%)

Query: 90  PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFV--FCTILEILIESGLLRSAYWVV 147
           P+ L+ VL  IR+  ++ L FF W      ++RD  +   C +++I + S  LR A+ +V
Sbjct: 93  PDHLIWVLMSIRDDYKLVLDFFDWAR----LRRDPSLESLCIVVQIAVASKDLRMAHRLV 148

Query: 148 -------ETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKML 200
                     V  +     + LI           + D+   +  +  ++ +   +F+K+L
Sbjct: 149 FEFWEKPHLDVGNSFDRFTERLIYTYKDWGAHPLVFDVFFQVLVEAGLLLEAGKLFDKLL 208

Query: 201 RNGLLPDVKNCNRIIKVLRDNGFSVK-AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEM 259
             G+L  V +CN  +  L ++   ++ A  V+R   E G+  + V+YN +L   C+ G++
Sbjct: 209 NYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKV 268

Query: 260 QEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI 319
           +EA  LL +M+ RG  P+ V+Y+V                                   I
Sbjct: 269 KEAHSLLIQMEFRGNVPDVVSYSV-----------------------------------I 293

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           + GY +   L + L L EE+  +G+ P   TYN +I  LCK GRV +A      M  + +
Sbjct: 294 VDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRI 353

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
            PD + Y TL+ G+ +SGN+   + LFDE++ + +VP  VTY ++I GLC+ G +  A++
Sbjct: 354 FPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARK 413

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           L   M+++G+ PD +TYT +++G CK G +  A    N+M+ KGL P+   YT  + G  
Sbjct: 414 LFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLC 473

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           K G+   A  L  EM  KG  P++ TYN L++GLCK+G++E+A +L+ +M   GF PD I
Sbjct: 474 KCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTI 533

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
           TYT+I+ A  +MG++ +  +L   ML KGL PT+VT+ VL++     G LE        M
Sbjct: 534 TYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWM 593

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
             KGI PN  T+N+L+   C    +     ++  M  +G++P+  TY ILI  +C A N 
Sbjct: 594 LDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNM 653

Query: 680 QEALRLYKEMLDREIEPDYCTHSALL 705
           +EA  L+KEM+++       ++++L+
Sbjct: 654 KEAWFLHKEMVEKGFSLTAASYNSLI 679



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 149/520 (28%), Positives = 243/520 (46%), Gaps = 50/520 (9%)

Query: 105 RIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIG 164
           R A R FR   ++ GV  +   +  IL +L + G ++ A+ +           ++ +   
Sbjct: 234 RTAFRVFREY-SEVGVCWNTVSYNIILHLLCQLGKVKEAHSL-----------LIQMEFR 281

Query: 165 GGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS 224
           G +   VS  ++   +  Y +   + + L +  ++ R GL P+    N II  L   G  
Sbjct: 282 GNVPDVVSYSVI---VDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRV 338

Query: 225 VKAREVYRMMGE----------------FG-------------------IKPSIVTYNTM 249
           V+A +V R+M                  FG                   I P  VTY +M
Sbjct: 339 VEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSM 398

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           +   C+ G++ EA +L  EM  +G  P+ VTY  LI G+ + GE+++A  L   M++ GL
Sbjct: 399 IHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGL 458

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
             +  +Y  ++ G  + G +  A  L  EM  +G+ P + TYN LI GLCK G +  A  
Sbjct: 459 TPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVK 518

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
              EM      PD I+Y T++  YC+ G + +A  L   +  + L PT+VT+N L++G C
Sbjct: 519 LMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFC 578

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
             G LE  ++L + M+++GI+P+  T+  ++   C   N+    E +  M  +G+ PD  
Sbjct: 579 MSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTN 638

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
            Y   I G  K  +  EA+ L +EM+ KGF     +YN L+ G  K    EEA +L  +M
Sbjct: 639 TYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEM 698

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
              GFI +   Y   +  + E G+     +L +  + K L
Sbjct: 699 RTHGFIAEKEIYDIFVDVNYEEGNWENTLELCDEAIEKCL 738



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 144/320 (45%), Gaps = 25/320 (7%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAY----WVVETVVCVNMHGILDVLIGGGLSSCVSIK 174
           G+K DE  +  +++   ++G ++ A+     +VE  +  N+  +    +  GL  C  + 
Sbjct: 422 GLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNV--VTYTALVDGLCKCGEVD 479

Query: 175 ILDLLLLIYTKKSM-------------------VEQCLLVFNKMLRNGLLPDVKNCNRII 215
           I + LL   ++K +                   +EQ + +  +M   G  PD      I+
Sbjct: 480 IANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIM 539

Query: 216 KVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCS 275
                 G   KA E+ R+M + G++P+IVT+N +++ FC  G +++   L+  M  +G  
Sbjct: 540 DAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIM 599

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           PN  T+N L+  +     +     + + M   G+    ++YN +I G+ +   + EA  L
Sbjct: 600 PNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFL 659

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
            +EMV +G + T A+YN LI G  K  +  +AR  F EM     I +   Y+  +     
Sbjct: 660 HKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYE 719

Query: 396 SGNIGEAFLLFDELRSRNLV 415
            GN      L DE   + LV
Sbjct: 720 EGNWENTLELCDEAIEKCLV 739


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  328 bits (840), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 180/547 (32%), Positives = 298/547 (54%), Gaps = 5/547 (0%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           + DLL+  Y +   + +    F  +   GL   +  CN ++  L   G+   A E+Y+ +
Sbjct: 29  VFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEV 88

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
              G++ ++ T N M+++ CK  +++     L +M+ +G  P+ VTYN LI  + R G L
Sbjct: 89  VRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLL 148

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           E+A  L+  M   GLK    +YN II G  + G  + A  + +EM+  G++P  ATYNIL
Sbjct: 149 EEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNIL 208

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           +   C+   + DA   F EM  + V+PD++S++ L+    ++G + +A   F ++++  L
Sbjct: 209 LVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGL 268

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P  V Y  LI G CR G +  A ++++ M+ QG + DV+TY  ++NG CK   LS A E
Sbjct: 269 APDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADE 328

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
            F EM  +G+ PD + +TT I G  K G+ ++A  L E M+ +   PD++TYN L+ G C
Sbjct: 329 LFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFC 388

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           K   +E+ NEL   M+     P+HI+Y  +I+    MG +     L++ M+ KG   T++
Sbjct: 389 KGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATII 448

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           T   ++  +   G    A  + S M +KGI P+ ITYN LING  +   +D+A+ L   M
Sbjct: 449 TCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKM 508

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL-----LKQL 709
           E  G+LP+  TY +++N     G  QEA  +  +M++R + PD  T+++L+        L
Sbjct: 509 ENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNL 568

Query: 710 DKDYKVH 716
            + ++VH
Sbjct: 569 KEAFRVH 575



 Score =  320 bits (819), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 175/528 (33%), Positives = 293/528 (55%)

Query: 170 CVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE 229
           CVSI   + LL    K   V+    ++ +++R+G+  +V   N +I  L  N      + 
Sbjct: 59  CVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKS 118

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
               M E G+ P +VTYNT+++++C++G ++EA EL+  M G+G  P   TYN +I G  
Sbjct: 119 FLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLC 178

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           + G+  +A+G++ +MLK+G+     +YN ++        +++A  + +EM ++GV P L 
Sbjct: 179 KTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLV 238

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           +++ LI  L K G +  A   F +M    + PD + Y  L+ G+CR+G + EA  + DE+
Sbjct: 239 SFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEM 298

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
             +  V  VVTYNT+++GLC+   L  A +L   M  +G+ PD  T+T ++NG  K GN+
Sbjct: 299 LEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNM 358

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
           + A   F  M+++ L+PD   Y T I G  K  +  +   L  +M+++   P+ I+Y +L
Sbjct: 359 NKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGIL 418

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           ++G C +G + EA  L  +MV  GF    IT  +I+      G+  +  +  +NML KG+
Sbjct: 419 INGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGI 478

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
            P  +TY  LI+       ++ AF   ++M+  G+ P+VITYN ++NG  R  R+ +A  
Sbjct: 479 VPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAEL 538

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           + + M E G+ P++ TYT LIN +    N +EA R++ EML R   PD
Sbjct: 539 IMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 586



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 141/453 (31%), Positives = 240/453 (52%)

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
           C  N + +++L+  + +  +L +     R +   GL VS ++ N ++ G  + G +  A 
Sbjct: 23  CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAW 82

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
            + +E+V  GV   + T NI+I  LCK  ++ + +    +M  K V PD+++YNTL+  Y
Sbjct: 83  EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY 142

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
           CR G + EAF L D +  + L P V TYN +I+GLC+ G    A+ + + M+  G+ PD 
Sbjct: 143 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 202

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
            TY I++   C+  N+  A   F+EM  +G+ PD  +++  I    K G   +A +   +
Sbjct: 203 ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRD 262

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           M   G  PD + Y +L+ G C+ G + EA ++  +M+  G + D +TY +I++   +   
Sbjct: 263 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKM 322

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
           L    +LF  M  +G+ P   T+T LI+ ++  G +  A   F  M  + ++P+V+TYN 
Sbjct: 323 LSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNT 382

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
           LI+G C+   +++   L+ DM    I PN  +Y ILIN  CN G   EA RL+ EM+++ 
Sbjct: 383 LIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKG 442

Query: 694 IEPDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
            E    T + ++         V A E+L ++ L
Sbjct: 443 FEATIITCNTIVKGYCRAGNAVKADEFLSNMLL 475


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  327 bits (838), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 185/560 (33%), Positives = 297/560 (53%), Gaps = 18/560 (3%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           +++++   K + V+  L +   M    +     + + ++  L D+G   +A +VYR   E
Sbjct: 149 NIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYR---E 205

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
              +P +VT N +L+ FC  G++ +A ELL  M    C+P+ V+Y  ++ G  + G +E+
Sbjct: 206 NRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEE 265

Query: 297 A------RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
           A      R L           S   YN +I G  +   + EA+ + E+M  R V+P   +
Sbjct: 266 AVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWS 325

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           Y ILI GL K G+++DAR+ F ++L   V P  ++Y +L++G C + +  +A  LF ++ 
Sbjct: 326 YGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMN 385

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
            R   P+ VTYN +ID  C+ G LE A  L + MI  G +PDV+TY  +++G CK   + 
Sbjct: 386 RRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVE 445

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAG---------ELKLGDTSEAYRLQEEMLAKGFPP 521
            A   FNEM R G  P+R ++ T I G           + G   EA+RL + M   G  P
Sbjct: 446 EALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVP 505

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           D++TY+ L+ GLC +  +++A  LL  MV     P  +T  ++IH   + G ++  R++ 
Sbjct: 506 DVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVL 565

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
           + M+  G SP +VTY  L+H H   G+ E A    S+M  +G+ PNV+TY AL++GLC+ 
Sbjct: 566 DAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKA 625

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
            R+ +A G+F  M+  G  PN +TYT LI   C+AG     L+L+ EM+   I PD+  +
Sbjct: 626 NRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVY 685

Query: 702 SALLLKQLDKDYKVHAVEYL 721
             L  +         A+E L
Sbjct: 686 GTLAAELCKSGRSARALEIL 705



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 161/555 (29%), Positives = 272/555 (49%), Gaps = 33/555 (5%)

Query: 102 EKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDV 161
           +K R  LR     E  P    DE  +CT+L+ L ++G +  A         V + G  ++
Sbjct: 229 DKARELLRAMPDEECAP----DEVSYCTVLDGLCKAGRVEEA---------VRLFGDREL 275

Query: 162 LIGGGLSSCVS-IKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRD 220
                 SS    ++  ++++L   +   +++ + +F KM    + PD  +   +I  L  
Sbjct: 276 PSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAK 335

Query: 221 NGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVT 280
            G    AR +++ +   G+ PS V Y +++   C      +A EL  +M  RGC P+ VT
Sbjct: 336 AGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVT 395

Query: 281 YNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV 340
           YNV+I    + G LE+A  LI+ M++ G      +YN ++ G  +   + EAL L  EM 
Sbjct: 396 YNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEME 455

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHR-----FFEMLRKNV----IPDIISYNTLLY 391
             G  P   ++N +I GLC+  ++  A  R      F +L++      +PD+++Y+TL+ 
Sbjct: 456 RLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLIS 515

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
           G C    + +A  L +++  R   PTVVT NTLI GLC+ G ++ A+++ + M++ G  P
Sbjct: 516 GLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSP 575

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           DV+TY  +V+G C+ G    ARE  ++M+ +GL P+   YT  ++G  K     EA  + 
Sbjct: 576 DVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVF 635

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
            +M + G  P+L TY  L+ G C  G ++   +L  +MV  G  PDH+ Y ++     + 
Sbjct: 636 AQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKS 695

Query: 572 GDLRRGRDLFNNMLRKGLSPTLV------TYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
           G  R  R L   +LR+G             Y   +      G++E+A  +  +M   G  
Sbjct: 696 G--RSARAL--EILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQL 751

Query: 626 PNVITYNALINGLCR 640
           P      +L+ GLC+
Sbjct: 752 PAPERCASLVAGLCK 766



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 156/519 (30%), Positives = 246/519 (47%), Gaps = 52/519 (10%)

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGC-SPNGVTYNVLITGFSRNG 292
           M + GI P+ + + +++  +C  G   EA+++   M+   C SP    YNVLI   S+  
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEE--CHSPYPDVYNVLIDSLSKRQ 58

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT-- 350
           E E  + +++ M+  G    + ++  I+CG  + G + EA  + +EM +R + P  AT  
Sbjct: 59  ETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSS 118

Query: 351 -----------------------------YNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
                                        YNI++  LCK  RV DA      M  K +  
Sbjct: 119 FLAHELCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPL 178

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
              S +++L G   SG I EA  ++ E R     P +VT N L++G C  G ++ A++L 
Sbjct: 179 AAGSLDSVLVGLMDSGRIDEALQVYRENRRE---PCLVTLNVLLEGFCSRGQVDKARELL 235

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMA------REFFNEMLRKGLQPDRFAYTTQI 495
             M ++   PD ++Y  +++G CK G +  A      RE  +        P    Y   I
Sbjct: 236 RAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVI 295

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
            G  +     EA ++ E+M  +   PD  +Y +L+ GL K G L +A  L +K++  G  
Sbjct: 296 LGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVT 355

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           P  + YTS+IH           R+LF +M R+G  P+ VTY V+I A   RG LE A   
Sbjct: 356 PSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDL 415

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL------ 669
             +M   G  P+V+TYN +++GLC+  R+++A  LF +ME  G  PN+ ++  +      
Sbjct: 416 IKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQ 475

Query: 670 ---INENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
              I++ C  G   EA RL K M D    PD  T+S L+
Sbjct: 476 QSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLI 514



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 158/337 (46%), Gaps = 17/337 (5%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           ++  +++   +  +M  +G +PDV   + +I  L        AR +   M +   KP++V
Sbjct: 484 QRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVV 543

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           T NT++   CK G ++EA E+L  M   G SP+ VTYN L+ G  R G+ E+AR L+ DM
Sbjct: 544 TQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDM 603

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           +  GL  +  +Y  ++ G  +   L EA  +  +M + G AP L TY  LI G C  G+V
Sbjct: 604 VARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQV 663

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS--RNLVPTVVTYN 422
                 F EM+   + PD + Y TL    C+SG    A  +  E R   R+       Y 
Sbjct: 664 DGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYR 723

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
             +DGL   G +E+A     +M+  G LP       +V G CK G    AR    E++  
Sbjct: 724 FAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIM-- 781

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
                  AY  +  G        +A +  EEM+ KG+
Sbjct: 782 -----DLAYGGKARG--------KAAKFVEEMVGKGY 805


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 175/522 (33%), Positives = 293/522 (56%), Gaps = 1/522 (0%)

Query: 173 IKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR 232
           I+  + L+  Y K   +E+   +  ++ +  L  +   C  I+  L   G   +A E+++
Sbjct: 407 IQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQ 466

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
            M  +G+KP+IV Y T++    KEG  +EA+++L  M+ +G SP+   YN +I GF + G
Sbjct: 467 EMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAG 526

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
           ++E+ +  + +M+  GLK + ++Y   I GY   G +  A     EM+  G+AP      
Sbjct: 527 KMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICT 586

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
            LI G CK G  + A  +F  ML + V+PD+ +++ L++G  ++G + EA  +F EL  +
Sbjct: 587 DLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDK 646

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
            LVP V TY +LI  LC+ GDL+ A +L ++M  +GI P+++TY  ++NG CK+G ++ A
Sbjct: 647 GLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKA 706

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
           RE F+ +  KGL  +   Y+T IAG  K  + +EA++L   M   G PPD   Y  L+ G
Sbjct: 707 RELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDG 766

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
            CK G+ E+A  L   MV +G I     + ++I    ++G L     L  +M+   ++P 
Sbjct: 767 CCKAGNTEKALSLFLGMVEEG-IASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPN 825

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
            VTYT+LI  H   G ++ A   F EMQ + + PNV+TY +L++G  R+ R  + + LF 
Sbjct: 826 HVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFD 885

Query: 653 DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           +M   GI P+   ++++++ +   GNW +AL+L  +ML   +
Sbjct: 886 EMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGV 927



 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 238/772 (30%), Positives = 370/772 (47%), Gaps = 91/772 (11%)

Query: 34  VHTYPSISESNNKDSVLNPESESYYKELIISTVEEKPWAFCNNRWVSDHFQAVVSDPELL 93
            H+  S S S N D+    +S++  KE I S +++K W F      S     +  D   L
Sbjct: 24  THSIKSNSFSTNADT---NQSDNTVKE-ITSLLKQKNWQFLIES--SPLPNKLNPDVVFL 77

Query: 94  VRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCV 153
           V   N++ +  R+   FF WV ++    ++   F  +  IL  SGL  +A  V+E ++  
Sbjct: 78  VIKQNQVIDPKRLH-GFFNWVNSRTVFSQNLSTFSILSLILCNSGLFGNAANVLERMIDT 136

Query: 154 -NMH-GILDVLIG-----GGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLP 206
            N H  ILD +I       G SS  S+ + ++L+ IY KK  + + + VF     N  + 
Sbjct: 137 RNPHVKILDSIIKCYKEINGSSSSSSVVVFEILIDIYRKKGFLNEAVSVFLGAKTNEFIV 196

Query: 207 DVKNCNRIIK-VLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
            +  CN + K +L+ N   +  +    M+G   I P + TY  +++++C+ G+++E   +
Sbjct: 197 GLACCNSLSKDLLKGNRVELFWKVYKGMLG--AIVPDVYTYTNLINAYCRVGKVEEGKHV 254

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQA---------RGLIRD------------- 303
           L++M+ +GC PN VTY+V+I G  R G++++A         +GL+ D             
Sbjct: 255 LFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCR 314

Query: 304 -------------MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
                        M  +GLK    +Y  +I G+ ++  +  A  ++EEM  R +     T
Sbjct: 315 QKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFT 374

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           Y  LI+GLCK G +  A   F EM    + PDI +YN L+ GY +  N+ +A+ L  E++
Sbjct: 375 YYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIK 434

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
             NL         +++GLC  GDL  A +L + MI+ G+ P+++ YT +V G  K G   
Sbjct: 435 KENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFE 494

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            A +    M  +GL PD F Y T I G  K G   E      EM+AKG  P++ TY   +
Sbjct: 495 EAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFI 554

Query: 531 HGLCKLGSLEEAN----ELL-------------------------------RKMVGDGFI 555
           HG C+ G ++ A     E+L                               R M+  G +
Sbjct: 555 HGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVL 614

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           PD  T++ +IH   + G L+    +F+ +L KGL P + TYT LI      G L+ AF  
Sbjct: 615 PDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFEL 674

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
             +M  KGI PN++TYNALINGLC+L  I +A  LF  + E+G+  N  TY+ +I   C 
Sbjct: 675 HDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCK 734

Query: 676 AGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLG 727
           + N  EA +L+  M    + PD   + AL    +D   K    E   SL LG
Sbjct: 735 SANLTEAFQLFHGMKLVGVPPDSFVYCAL----IDGCCKAGNTEKALSLFLG 782



 Score =  306 bits (784), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 167/480 (34%), Positives = 264/480 (55%), Gaps = 1/480 (0%)

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           KA +++  M   GIKP I TYN +++ + K   M++A ELL E++    + N      ++
Sbjct: 390 KAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIV 449

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            G    G+L +A  L ++M+  GLK +   Y  I+ G  ++G   EA+ +   M  +G++
Sbjct: 450 NGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLS 509

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P +  YN +I G CK G++ + +    EM+ K + P++ +Y   ++GYCR+G +  A   
Sbjct: 510 PDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERS 569

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
           F E+    + P  V    LIDG C+ G+   A      M++QG+LPDV T++++++G  K
Sbjct: 570 FIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSK 629

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
            G L  A   F+E+L KGL PD F YT+ I+   K GD   A+ L ++M  KG  P+++T
Sbjct: 630 NGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVT 689

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           YN L++GLCKLG + +A EL   +   G   + +TY++II    +  +L     LF+ M 
Sbjct: 690 YNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMK 749

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
             G+ P    Y  LI      G  E A   F  M  +GI  +   +NALI+G  +L ++ 
Sbjct: 750 LVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGI-ASTPAFNALIDGFFKLGKLI 808

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +AY L  DM +  I PN  TYTILI  +C  GN +EA +L+ EM  R + P+  T+++LL
Sbjct: 809 EAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLL 868



 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 166/511 (32%), Positives = 268/511 (52%), Gaps = 10/511 (1%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGF-----SVKAREVYRMMGEFGIKPSI 243
           V++ L +   M   GLLPD    N I   L D GF     S + + +   M   G+KP  
Sbjct: 283 VDEALELKRSMANKGLLPD----NYIYATLID-GFCRQKRSTEGKSMLDEMYTMGLKPDH 337

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           V Y  +++ F K+ ++  A ++  EM  R    N  TY  LI G  + G+LE+A  L  +
Sbjct: 338 VAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSE 397

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M  +G+K    +YN +I GY +   + +A  L  E+    +         ++ GLC  G 
Sbjct: 398 MTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGD 457

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           ++ A   F EM+   + P+I+ Y T++ G  + G   EA  +   ++ + L P V  YNT
Sbjct: 458 LTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNT 517

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           +I G C+ G +E  +     MI +G+ P+V TY   ++G C+ G +  A   F EML  G
Sbjct: 518 VIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSG 577

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           + P+    T  I G  K G+T++A+     ML +G  PD+ T++VL+HGL K G L+EA 
Sbjct: 578 IAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAM 637

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
            +  +++  G +PD  TYTS+I    + GDL+   +L ++M +KG++P +VTY  LI+  
Sbjct: 638 GVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGL 697

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
              G +  A   F  +  KG+  N +TY+ +I G C+   + +A+ LF  M+  G+ P+ 
Sbjct: 698 CKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDS 757

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREI 694
           + Y  LI+  C AGN ++AL L+  M++  I
Sbjct: 758 FVYCALIDGCCKAGNTEKALSLFLGMVEEGI 788



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 147/535 (27%), Positives = 255/535 (47%), Gaps = 48/535 (8%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G+K +  ++ TI++ L++ G    A              IL V+   GLS    +   + 
Sbjct: 472 GLKPNIVIYTTIVKGLVKEGRFEEAI------------KILGVMKDQGLSP--DVFCYNT 517

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           +++ + K   +E+      +M+  GL P+V      I      G    A   +  M + G
Sbjct: 518 VIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSG 577

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           I P+ V    ++D +CK+G   +A      M  +G  P+  T++VLI G S+NG+L++A 
Sbjct: 578 IAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAM 637

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
           G+  ++L  GL     +Y  +I    ++G L  A  L ++M  +G+ P + TYN LI GL
Sbjct: 638 GVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGL 697

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           CK G ++ AR  F  +  K +  + ++Y+T++ GYC+S N+ EAF LF  ++   + P  
Sbjct: 698 CKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDS 757

Query: 419 VTYNTLIDGLCRYGDLEVA----------------------------------QQLKENM 444
             Y  LIDG C+ G+ E A                                   QL E+M
Sbjct: 758 FVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGKLIEAYQLVEDM 817

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
           ++  I P+ +TYTI++   C +GN+  A + F EM ++ + P+   YT+ + G  ++G  
Sbjct: 818 VDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRR 877

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
           SE + L +EM+A+G  PD + ++V+V    K G+  +A +L+  M+ +G       YT +
Sbjct: 878 SEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTIL 937

Query: 565 IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
           I A  +  +L     + + + ++G   +L T   L+      GR + A      M
Sbjct: 938 IDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESM 992



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 123/402 (30%), Positives = 193/402 (48%), Gaps = 34/402 (8%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K     +    F  ML  G+LPDV+  + +I  L  NG   +A  V+  + + G+ P 
Sbjct: 592 YCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPD 651

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           + TY +++ + CKEG+++ A EL  +M  +G +PN VTYN LI G  + GE+ +AR L  
Sbjct: 652 VFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFD 711

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            + + GL  ++ +Y+ II GY +   L EA  L   M   GV P    Y  LI G CK G
Sbjct: 712 GIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAG 771

Query: 363 RVSDARHRFF----------------------------------EMLRKNVIPDIISYNT 388
               A   F                                   +M+  ++ P+ ++Y  
Sbjct: 772 NTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTI 831

Query: 389 LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
           L+  +C  GNI EA  LF E++ RN++P V+TY +L+ G  R G       L + M+ +G
Sbjct: 832 LIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARG 891

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
           I PD + +++MV+   K GN   A +  ++ML +G+   +  YT  I    K  + SE  
Sbjct: 892 IKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVL 951

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           ++ +E+  +G    L T   LV    + G  +EA  +L  MV
Sbjct: 952 KVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESMV 993



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 166/376 (44%), Gaps = 69/376 (18%)

Query: 184  TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
            +K   +++ + VF+++L  GL+PDV     +I  L   G    A E++  M + GI P+I
Sbjct: 628  SKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNI 687

Query: 244  VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
            VTYN +++  CK GE+ +A EL   +  +G + N VTY+ +I G+ ++  L +A  L   
Sbjct: 688  VTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHG 747

Query: 304  MLKLGLK----------------------------------VSAHSYNPIICGYSEKGLL 329
            M  +G+                                    S  ++N +I G+ + G L
Sbjct: 748  MKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGKL 807

Query: 330  VEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTL 389
            +EA  L E+MV   + P   TY ILI   C  G + +A   F EM ++NV+P++++Y +L
Sbjct: 808  IEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSL 867

Query: 390  LYGYCRSGNIGEAFLLFDELRSRNLVPTVVT----------------------------- 420
            L+GY R G   E F LFDE+ +R + P  +                              
Sbjct: 868  LHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGV 927

Query: 421  ------YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
                  Y  LID LC++ +L    ++ + +  QG    + T   +V    + G    A  
Sbjct: 928  NVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALR 987

Query: 475  FFNEMLRKGLQPDRFA 490
                M+R  L    F+
Sbjct: 988  VLESMVRSFLNLLEFS 1003


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  325 bits (833), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 197/636 (30%), Positives = 321/636 (50%), Gaps = 50/636 (7%)

Query: 104 PRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLI 163
           P  ALRFF W   Q G   + + +  + E L+       A  + ET      H     ++
Sbjct: 4   PDAALRFFHWASKQQGFDHNVYTYNRLFEALLR------ARRIDETC-----H-----IL 47

Query: 164 GGGLSSCVSIKILDLLLLIY--TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDN 221
             G    ++  +    ++I    K   +++   +  +M  +G +PD    N +I  L   
Sbjct: 48  KNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKA 107

Query: 222 GFSVKAREVYR--------------------------------MMGEFGIKPSIVTYNTM 249
             + KA + +R                                 M + G  P+  TYN +
Sbjct: 108 RNTAKALDYFRSMECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVL 167

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           ++ FCK  ++  A  LL EM+  G +PN VTY+ +I GF R  +++ A  L R M++ G 
Sbjct: 168 INGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGC 227

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
             +  +YN ++ G    GL+ EA  L +EM  RG+ P   +Y+ L+ GLCK G++  A  
Sbjct: 228 MPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALK 287

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
            F +    +  PD+++Y+TL+ G C++G + EA  LF+++R  +  P VVT+  L+DGLC
Sbjct: 288 VFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLC 347

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
           +   L+ AQQ+ E M ++   P+VITY+ +++G CK G +  A+E F  M+ +G++P+  
Sbjct: 348 KGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVV 407

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
            Y + I G         A  L EEM A G  PD+ITYN L+ GLCK G   EAN L   M
Sbjct: 408 TYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDM 467

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRL 609
                 PD ITY+ +I    ++  +   R LF++ML++ + P +VT++ L+  +   G +
Sbjct: 468 KAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLV 527

Query: 610 ELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL 669
           + A     EM      P+V TY +L++G C++ R+ +A  +   M + G  PN  TYT L
Sbjct: 528 DDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTAL 587

Query: 670 INENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           I+  C AG    A RL +EM+   ++P+  T+ +L+
Sbjct: 588 IDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLI 623



 Score =  302 bits (773), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 164/525 (31%), Positives = 281/525 (53%), Gaps = 2/525 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + +++ V+    +F +M+ NG +P++   N ++  L  NG   +A E+   M E G++P 
Sbjct: 206 FCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPD 265

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             +Y+T++   CK G++  AL++  +     C P+ V Y+ LI G  + G L++A  L  
Sbjct: 266 KFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFE 325

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M +   +    ++  ++ G  +   L EA  + E M  R   P + TY+ LI GLCK G
Sbjct: 326 KMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTG 385

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           +V DA+  F  M+ + + P++++YN+L++G+C +  +  A LL +E+ +   +P ++TYN
Sbjct: 386 QVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYN 445

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           TLIDGLC+ G    A +L  +M  +   PDVITY+ ++ G CK+  + MAR  F++ML++
Sbjct: 446 TLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQ 505

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
            + PD   ++T + G    G   +A RL EEM+A    PD+ TY  LV G CK+G + EA
Sbjct: 506 AVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEA 565

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             +L++M   G  P+ +TYT++I A    G       L   M+  G+ P ++TY  LI  
Sbjct: 566 RRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGG 625

Query: 603 HAARGRLELAFMYFSEMQV-KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
               G LE A      ++  +  + ++  Y  +++GLCR  R+  A  L   +++ G  P
Sbjct: 626 FCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPP 685

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEM-LDREIEPDYCTHSALL 705
               Y  LI   C      +A+ + +EM L R+  P+   + A++
Sbjct: 686 RHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVI 730



 Score =  268 bits (686), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 174/550 (31%), Positives = 270/550 (49%), Gaps = 17/550 (3%)

Query: 103 KPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVL 162
           K   A + FR +  + G   +   + T+L  L  +GL+  AY             +LD +
Sbjct: 211 KVDTAYKLFRQM-VENGCMPNLVTYNTLLSGLCRNGLMDEAYE------------LLDEM 257

Query: 163 IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG 222
              GL         D L+    K   ++  L VF         PDV   + +I  L   G
Sbjct: 258 RERGLQP--DKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAG 315

Query: 223 FSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYN 282
              +A +++  M E   +P +VT+  ++D  CK   +QEA ++L  M+ R C+PN +TY+
Sbjct: 316 RLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYS 375

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
            LI G  + G++  A+ + + M+  G++ +  +YN +I G+     +  AL L EEM   
Sbjct: 376 SLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTAT 435

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           G  P + TYN LI GLCK GR  +A   F +M  K   PD+I+Y+ L+ G+C+   I  A
Sbjct: 436 GCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMA 495

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
             LFD++  + ++P VVT++TL++G C  G ++ A++L E M+     PDV TYT +V+G
Sbjct: 496 RTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDG 555

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            CK+G +  AR     M ++G QP+   YT  I    + G  + AYRL EEM+  G  P+
Sbjct: 556 FCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPN 615

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGD-GFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           +ITY  L+ G C  G LEEA ++L ++  D     D   Y  ++      G +    +L 
Sbjct: 616 VITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELL 675

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV-KGIRPNVITYNALINGLCR 640
             + + G  P    Y  LI        L  A     EM + +  RPN   Y A+I  L R
Sbjct: 676 EAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAR 735

Query: 641 LRRIDQAYGL 650
             R ++A  L
Sbjct: 736 EGRHEEANAL 745



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/370 (31%), Positives = 191/370 (51%), Gaps = 2/370 (0%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   V     VF +M+  G+ P+V   N +I           A  +   M   G  P I+
Sbjct: 383 KTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDII 442

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TYNT++D  CK G   EA  L  +M+ + C+P+ +TY+ LI GF +   ++ AR L  DM
Sbjct: 443 TYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDM 502

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           LK  +     +++ ++ GY   GL+ +A  L EEMV    +P + TY  L+ G CK GR+
Sbjct: 503 LKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRM 562

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            +AR     M ++   P++++Y  L+  +CR+G    A+ L +E+    + P V+TY +L
Sbjct: 563 VEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSL 622

Query: 425 IDGLCRYGDLEVAQQLKENM-INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           I G C  GDLE A+++ E +  ++    D+  Y +M++G C+ G +S A E    + + G
Sbjct: 623 IGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSG 682

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEM-LAKGFPPDLITYNVLVHGLCKLGSLEEA 542
             P    Y   I G  +  +  +A  + EEM L++   P+   Y  ++  L + G  EEA
Sbjct: 683 TPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEA 742

Query: 543 NELLRKMVGD 552
           N L  +++G+
Sbjct: 743 NALADELLGN 752



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 113/361 (31%), Positives = 174/361 (48%), Gaps = 5/361 (1%)

Query: 366 DARHRFFEMLRKNVIPD--IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           DA  RFF    K    D  + +YN L     R+  I E   +        + P V TY  
Sbjct: 5   DAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAV 64

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           +I GLC+ GDL+ A +L E M   G +PD   Y  +++  CK  N + A ++F  M    
Sbjct: 65  VIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSM---E 121

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
            + +   +T  I G  K     EA     +M  KG  P+  TYNVL++G CK+  +  A 
Sbjct: 122 CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 181

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
            LL++M   G  P+ +TY+++IH       +     LF  M+  G  P LVTY  L+   
Sbjct: 182 LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 241

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
              G ++ A+    EM+ +G++P+  +Y+ L+ GLC+  +ID A  +F D       P+ 
Sbjct: 242 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDV 301

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLES 723
             Y+ LI   C AG   EA +L+++M +   EPD  T +AL+      D    A + LE+
Sbjct: 302 VAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLET 361

Query: 724 L 724
           +
Sbjct: 362 M 362


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  325 bits (832), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 206/649 (31%), Positives = 326/649 (50%), Gaps = 33/649 (5%)

Query: 79  VSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVF---CTILEILI 135
           +S HF      P+    +L + +    + L+F  W  +Q       F F   C  L IL 
Sbjct: 41  LSSHFT-----PQASSNLLLKSQFDSSLVLKFLDWARSQ-----QFFSFQCKCLALHILT 90

Query: 136 ESGLLRSAYWVVETVV--CVNMHG--ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQ 191
              L ++A  + E VV   V+  G  +   L         S  + DL++    + +++ +
Sbjct: 91  RYKLYKTAQSLAEEVVVNTVDETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINK 150

Query: 192 CLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE-VYRMMGEFGIKPSIVTYNTML 250
            L + N     G +P V + N I+  +     SVK  E +++ M E G+ P++ TYN ++
Sbjct: 151 ALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILI 210

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
             FC  G ++  L    EM+  GC PN VTYN +I  + +  ++ +A  L+R M   GL 
Sbjct: 211 RGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLN 270

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
            +  SYN +I G   +G + E   + EEM  R   P   T+N LI G C  G    A   
Sbjct: 271 PNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVL 330

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
             EM++  + P++++Y TL+   C++GN+  A    D++R R L P   TY TLIDG  +
Sbjct: 331 HAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQ 390

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
            G L+ A Q+ + M+  G  P +ITY  ++NG C +G +  A     EM+ +G  PD  +
Sbjct: 391 QGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVS 450

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           Y+T I+G  +  +  +A++L+ EM+AKG  PD+ TY+ L+ GLCK   L E  +L ++M+
Sbjct: 451 YSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEML 510

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
             G  PD +TYTS+I+A    GDL +   L + M++KG SP +VTY VLI+    + R +
Sbjct: 511 SLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTK 570

Query: 611 LAFMYFSEMQVKGIRPNVITYNALIN---------------GLCRLRRIDQAYGLFIDME 655
            A     ++  +   PN ITYN LI+               G C    +++A  +   M 
Sbjct: 571 EAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESML 630

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
           ++G   N+  Y ++I+ +   GN ++A  LYKEML     P   T  AL
Sbjct: 631 QKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMAL 679



 Score =  286 bits (731), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 173/500 (34%), Positives = 264/500 (52%), Gaps = 23/500 (4%)

Query: 157 GILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK 216
           GI   ++  G+S   ++   ++L+  +     +E  L  F +M RNG LP+V   N II 
Sbjct: 189 GIFKEMVESGVSP--NVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIID 246

Query: 217 V---LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
               LR  G   +A ++ R+M   G+ P++++YN +++  C+EG+M+E  E+L EM  R 
Sbjct: 247 AYCKLRKIG---EAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRR 303

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
             P+ VT+N LI G+   G   QA  L  +M+K GL  +  +Y  +I    + G L  A+
Sbjct: 304 YVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAM 363

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
              ++M  RG+ P   TY  LI G  + G +  A     EM+     P II+YN L+ G+
Sbjct: 364 EFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGH 423

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
           C  G + +A  L  E+  R  +P VV+Y+T+I G CR  +LE A QLK  M+ +GI PDV
Sbjct: 424 CILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDV 483

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
            TY+ ++ G CK   L    + F EML  GL PD   YT+ I      GD  +A RL +E
Sbjct: 484 ATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDE 543

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII-------- 565
           M+ KGF PD++TYNVL++G  K    +EA  LL K++ +  +P+ ITY ++I        
Sbjct: 544 MIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEF 603

Query: 566 HASLEM-------GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
            ++L +       G +     +  +ML+KG       Y V+IH H+  G +E A+  + E
Sbjct: 604 KSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKE 663

Query: 619 MQVKGIRPNVITYNALINGL 638
           M   G  P+ +T  AL   L
Sbjct: 664 MLHSGFAPHSVTIMALAKSL 683



 Score =  281 bits (720), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 158/470 (33%), Positives = 259/470 (55%), Gaps = 1/470 (0%)

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE-LE 295
           +  K S   ++ ++ S  +   + +AL ++   +  G  P  ++YN ++    R  + ++
Sbjct: 126 YQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVK 185

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
            A G+ ++M++ G+  + ++YN +I G+   G L   L    EM   G  P + TYN +I
Sbjct: 186 IAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTII 245

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
              CK  ++ +A      M  K + P++ISYN ++ G CR G + E   + +E+  R  V
Sbjct: 246 DAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYV 305

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P  VT+NTLI+G C  G+   A  L   M+  G+ P+V+TYT ++N  CK GNL+ A EF
Sbjct: 306 PDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEF 365

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
            ++M  +GL P+   YTT I G  + G   +AY++ +EM+  GF P +ITYN L++G C 
Sbjct: 366 LDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCI 425

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
           LG +E+A+ LL++M+  GFIPD ++Y++II       +L +   L   M+ KG+SP + T
Sbjct: 426 LGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVAT 485

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           Y+ LI     + RL      F EM   G+ P+ +TY +LIN  C    +D+A  L  +M 
Sbjct: 486 YSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMI 545

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           ++G  P+  TY +LIN        +EA RL  ++L  E  P+  T++ L+
Sbjct: 546 QKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLI 595



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 128/416 (30%), Positives = 214/416 (51%), Gaps = 15/416 (3%)

Query: 191 QCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTML 250
           Q L++  +M++NGL P+V     +I  +   G   +A E    M + G+ P+  TY T++
Sbjct: 326 QALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLI 385

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
           D F ++G +++A +++ EM   G +P  +TYN LI G    G +E A GL+++M++ G  
Sbjct: 386 DGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFI 445

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
               SY+ II G+     L +A  L+ EMV +G++P +ATY+ LI GLCK  R+ +    
Sbjct: 446 PDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDL 505

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
           F EML   + PD ++Y +L+  YC  G++ +A  L DE+  +   P +VTYN LI+G  +
Sbjct: 506 FQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNK 565

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVN---------------GSCKMGNLSMAREF 475
               + A++L   ++ +  +P+ ITY  +++               G C  G ++ A   
Sbjct: 566 QSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRV 625

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
              ML+KG + +   Y   I G  K+G+  +AY L +EML  GF P  +T   L   L  
Sbjct: 626 LESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYH 685

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
            G   E N+LL   +    I +      +I  + + G++    ++  +M   GL P
Sbjct: 686 EGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMALSGLLP 741



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 115/213 (53%), Gaps = 3/213 (1%)

Query: 515 LAK--GFPPDLITYNVLVHGLCKLG-SLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
           LAK  GF P +++YN ++  + +   S++ A  + ++MV  G  P+  TY  +I      
Sbjct: 157 LAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTA 216

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
           G+L  G   F  M R G  P +VTY  +I A+    ++  AF     M +KG+ PN+I+Y
Sbjct: 217 GNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISY 276

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           N +INGLCR  ++ +   +  +M +   +P++ T+  LIN  CN GN+ +AL L+ EM+ 
Sbjct: 277 NVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVK 336

Query: 692 REIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
             + P+  T++ L+           A+E+L+ +
Sbjct: 337 NGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQM 369


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  324 bits (831), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 200/618 (32%), Positives = 319/618 (51%), Gaps = 20/618 (3%)

Query: 93  LVRVLNRIREKPRIALRFFRWVETQPGVKRDEFV--FCTILEILIESGLLRSA------Y 144
           L+ VL  I+   R+ L FF W      ++RD  +   C + +I   S  L+ A      +
Sbjct: 97  LIWVLMNIKNDYRLVLSFFEWA----CLRRDPSLEARCIVAQIATASKDLKMARKLIQDF 152

Query: 145 WVVETV-VCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNG 203
           WV   + V V+    ++ LI          ++ D+   +  +  M+++   +F+KML  G
Sbjct: 153 WVNPNLDVGVSFGHFVEQLIYTYKDWGSDPRVFDIFFQVLVEAGMLDEARKLFDKMLNYG 212

Query: 204 LLPDVKNCNRIIKVLRDNGFSVK-AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           LL  V +CN  I  L ++   +K A +V+    E G+  +  +YN +  S C+ G + EA
Sbjct: 213 LLISVDSCNLFISHLSEDLDGIKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEA 272

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
            +LL +M+ RGC P+ ++Y+ +I G+ + GEL++   LI +M   GLK + ++YN +I  
Sbjct: 273 HQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILL 332

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
             + G + EA  +  EM++ G+AP    Y  LI G CK G VS A   F EM ++ + PD
Sbjct: 333 LCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPD 392

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
            I+Y  ++ G C++G + EA  LF E+  + L P  VTY  LIDG C+ G ++ A  L  
Sbjct: 393 FITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHN 452

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            M+  G+ P+++TYT + +G CK G +  A E  +EM RKGL+ + + Y + + G  K G
Sbjct: 453 QMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAG 512

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
           +  +A +L ++M   GF PD +TY  L+   CK   +  A+ELLR+M+     P  +T+ 
Sbjct: 513 NIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFN 572

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
            +++     G L  G  L   ML KG+ P   TY  LI  +  R  +      +  M  K
Sbjct: 573 VLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAK 632

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
           G+ P+  TYN LI G C+ R + +A+ L  DM  +G      +Y  LI        + EA
Sbjct: 633 GVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEA 692

Query: 683 LRLYKEM------LDREI 694
             L+++M       DREI
Sbjct: 693 RELFEQMRREGLVADREI 710



 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 147/454 (32%), Positives = 227/454 (50%), Gaps = 6/454 (1%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y +   +++ L +  +M   GL P+    N +I +L   G   +A  V R M   GI P 
Sbjct: 298 YCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPD 357

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            V Y T++D FCK G +  A  L  EMQ R  SP+ +TY  +I G  + G + +A  L  
Sbjct: 358 GVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFH 417

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M+   L+    +Y  +I GY ++G + EA +L  +M+  G+ P + TY  L  GLCK G
Sbjct: 418 EMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCG 477

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            V  A     EM RK +  +I +YN+L+ G C++GNI +A  L  ++      P  VTY 
Sbjct: 478 EVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYT 537

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           TL+D  C+  ++  A +L   M+++ + P V+T+ +++NG C  G L    +    ML K
Sbjct: 538 TLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEK 597

Query: 483 GLQPDRFAYTT---QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
           G+ P+   Y +   Q      +  T+E YR    M AKG  PD  TYN+L+ G CK  ++
Sbjct: 598 GIMPNATTYNSLIKQYCIRNNMRATTEIYR---GMCAKGVVPDGNTYNILIKGHCKARNM 654

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           +EA  L R MVG GF     +Y ++I    +       R+LF  M R+GL      Y + 
Sbjct: 655 KEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIF 714

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
              +   G++EL      E   K +  ++ T N 
Sbjct: 715 ADINYDEGKMELTLELCDEAIEKCLVGDIQTKNT 748



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/375 (32%), Positives = 191/375 (50%), Gaps = 1/375 (0%)

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS-GNIGEAFLLFDEL 409
           ++I    L + G + +AR  F +ML   ++  + S N  +         I  A  +F E 
Sbjct: 185 FDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVEF 244

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
               +     +YN +   LC+ G +  A QL   M  +G +PDVI+Y+ ++NG C++G L
Sbjct: 245 PEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGEL 304

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
               +   EM  KGL+P+ + Y   I    K G  +EA R+  EM+++G  PD + Y  L
Sbjct: 305 QRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTL 364

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           + G CKLG++  A  L  +M      PD ITYT++I    + G +     LF+ M+ K L
Sbjct: 365 IDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRL 424

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
            P  VTYT LI  +   G+++ AF   ++M   G+ PN++TY AL +GLC+   +D A  
Sbjct: 425 EPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANE 484

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQL 709
           L  +M  +G+  N YTY  L+N  C AGN  +A++L K+M      PD  T++ L+    
Sbjct: 485 LLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYC 544

Query: 710 DKDYKVHAVEYLESL 724
                V A E L  +
Sbjct: 545 KSREMVRAHELLRQM 559



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 36/225 (16%)

Query: 517 KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG----------FIP---------- 556
           K +  D   +++    L + G L+EA +L  KM+  G          FI           
Sbjct: 176 KDWGSDPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIK 235

Query: 557 ----------------DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
                           +  +Y  I H+  ++G +     L   M  +G  P +++Y+ +I
Sbjct: 236 IALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVI 295

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
           + +   G L+       EMQ+KG++PN  TYN +I  LC+  ++ +A  +  +M  EGI 
Sbjct: 296 NGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIA 355

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           P+   YT LI+  C  GN   A RL+ EM  R+I PD+ T++A++
Sbjct: 356 PDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVI 400


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 206/649 (31%), Positives = 326/649 (50%), Gaps = 33/649 (5%)

Query: 79  VSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVF---CTILEILI 135
           +S HF      P+    +L + +    + L+F  W  +Q       F F   C  L IL 
Sbjct: 41  LSSHFT-----PQASSNLLLKSQFDSSLVLKFLDWARSQ-----QFFSFQCKCLALHILT 90

Query: 136 ESGLLRSAYWVVETVV--CVNMHG--ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQ 191
              L ++A  + E VV   V+  G  +   L         S  + DL++    + +++ +
Sbjct: 91  RYKLYKTAQSLAEEVVVNTVDETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINK 150

Query: 192 CLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE-VYRMMGEFGIKPSIVTYNTML 250
            L + N     G +P V + N I+  +     SVK  E +++ M E G+ P++ TYN ++
Sbjct: 151 ALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILI 210

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
             FC  G ++  L    EM+  GC PN VTYN +I  + +  ++ +A  L+R M   GL 
Sbjct: 211 RGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLN 270

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
            +  SYN +I G   +G + E   + EEM  R   P   T+N LI G C  G    A   
Sbjct: 271 PNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVL 330

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
             EM++  + P++++Y TL+   C++GN+  A    D++R R L P   TY TLIDG  +
Sbjct: 331 HAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQ 390

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
            G L+ A Q+ + M+  G  P +ITY  ++NG C +G +  A     EM+ +G  PD  +
Sbjct: 391 QGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVS 450

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           Y+T I+G  +  +  +A++L+ EM+AKG  PD+ TY+ L+ GLCK   L E  +L ++M+
Sbjct: 451 YSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEML 510

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
             G  PD +TYTS+I+A    GDL +   L + M++KG SP +VTY VLI+    + R +
Sbjct: 511 SLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTK 570

Query: 611 LAFMYFSEMQVKGIRPNVITYNALIN---------------GLCRLRRIDQAYGLFIDME 655
            A     ++  +   PN ITYN LI+               G C    +++A  +   M 
Sbjct: 571 EAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESML 630

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
           ++G   N+  Y ++I+ +   GN ++A  LYKEML     P   T  AL
Sbjct: 631 QKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMAL 679



 Score =  286 bits (732), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 173/500 (34%), Positives = 264/500 (52%), Gaps = 23/500 (4%)

Query: 157 GILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK 216
           GI   ++  G+S   ++   ++L+  +     +E  L  F +M RNG LP+V   N II 
Sbjct: 189 GIFKEMVESGVSP--NVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIID 246

Query: 217 V---LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
               LR  G   +A ++ R+M   G+ P++++YN +++  C+EG+M+E  E+L EM  R 
Sbjct: 247 AYCKLRKIG---EAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRR 303

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
             P+ VT+N LI G+   G   QA  L  +M+K GL  +  +Y  +I    + G L  A+
Sbjct: 304 YVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAM 363

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
              ++M  RG+ P   TY  LI G  + G +  A     EM+     P II+YN L+ G+
Sbjct: 364 EFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGH 423

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
           C  G + +A  L  E+  R  +P VV+Y+T+I G CR  +LE A QLK  M+ +GI PDV
Sbjct: 424 CILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDV 483

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
            TY+ ++ G CK   L    + F EML  GL PD   YT+ I      GD  +A RL +E
Sbjct: 484 ATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDE 543

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII-------- 565
           M+ KGF PD++TYNVL++G  K    +EA  LL K++ +  +P+ ITY ++I        
Sbjct: 544 MIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEF 603

Query: 566 HASLEM-------GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
            ++L +       G +     +  +ML+KG       Y V+IH H+  G +E A+  + E
Sbjct: 604 KSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKE 663

Query: 619 MQVKGIRPNVITYNALINGL 638
           M   G  P+ +T  AL   L
Sbjct: 664 MLHSGFAPHSVTIMALAKSL 683



 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 158/470 (33%), Positives = 259/470 (55%), Gaps = 1/470 (0%)

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE-LE 295
           +  K S   ++ ++ S  +   + +AL ++   +  G  P  ++YN ++    R  + ++
Sbjct: 126 YQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVK 185

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
            A G+ ++M++ G+  + ++YN +I G+   G L   L    EM   G  P + TYN +I
Sbjct: 186 IAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTII 245

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
              CK  ++ +A      M  K + P++ISYN ++ G CR G + E   + +E+  R  V
Sbjct: 246 DAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYV 305

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P  VT+NTLI+G C  G+   A  L   M+  G+ P+V+TYT ++N  CK GNL+ A EF
Sbjct: 306 PDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEF 365

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
            ++M  +GL P+   YTT I G  + G   +AY++ +EM+  GF P +ITYN L++G C 
Sbjct: 366 LDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCI 425

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
           LG +E+A+ LL++M+  GFIPD ++Y++II       +L +   L   M+ KG+SP + T
Sbjct: 426 LGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVAT 485

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           Y+ LI     + RL      F EM   G+ P+ +TY +LIN  C    +D+A  L  +M 
Sbjct: 486 YSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMI 545

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           ++G  P+  TY +LIN        +EA RL  ++L  E  P+  T++ L+
Sbjct: 546 QKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLI 595



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 128/416 (30%), Positives = 214/416 (51%), Gaps = 15/416 (3%)

Query: 191 QCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTML 250
           Q L++  +M++NGL P+V     +I  +   G   +A E    M + G+ P+  TY T++
Sbjct: 326 QALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLI 385

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
           D F ++G +++A +++ EM   G +P  +TYN LI G    G +E A GL+++M++ G  
Sbjct: 386 DGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFI 445

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
               SY+ II G+     L +A  L+ EMV +G++P +ATY+ LI GLCK  R+ +    
Sbjct: 446 PDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDL 505

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
           F EML   + PD ++Y +L+  YC  G++ +A  L DE+  +   P +VTYN LI+G  +
Sbjct: 506 FQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNK 565

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVN---------------GSCKMGNLSMAREF 475
               + A++L   ++ +  +P+ ITY  +++               G C  G ++ A   
Sbjct: 566 QSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRV 625

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
              ML+KG + +   Y   I G  K+G+  +AY L +EML  GF P  +T   L   L  
Sbjct: 626 LESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYH 685

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
            G   E N+LL   +    I +      +I  + + G++    ++  +M   GL P
Sbjct: 686 EGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMALSGLLP 741



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 115/213 (53%), Gaps = 3/213 (1%)

Query: 515 LAK--GFPPDLITYNVLVHGLCKLG-SLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
           LAK  GF P +++YN ++  + +   S++ A  + ++MV  G  P+  TY  +I      
Sbjct: 157 LAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTA 216

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
           G+L  G   F  M R G  P +VTY  +I A+    ++  AF     M +KG+ PN+I+Y
Sbjct: 217 GNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISY 276

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           N +INGLCR  ++ +   +  +M +   +P++ T+  LIN  CN GN+ +AL L+ EM+ 
Sbjct: 277 NVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVK 336

Query: 692 REIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
             + P+  T++ L+           A+E+L+ +
Sbjct: 337 NGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQM 369


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  323 bits (829), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 168/488 (34%), Positives = 262/488 (53%)

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M E  + P   +Y  ++D   K G++ +A  L  ++   G +P+ V Y  LI G      
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
            + AR L  DM + G   S  +YN +I    ++G+L EA +L ++M+  G  P + TYN 
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           ++ GLCK  RV +A   F EM R    P+  S+NT++ G C+   I +A  +F E+ +++
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           + P   +Y  LIDGL + G L  A +L + M++ GI P  +TY ++++G C    L  A 
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
           E F  M  KG +P RF +   I    K G   EA+RL + M   G  PD++TY+ L+ GL
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
           C +  +++A  LL  MV     P  +T  ++IH   + G ++  R++ + M+  G SP +
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
           VTY  L+H H   G+ E A    S+M  +G+ PNV+TY AL++GLC+  R+ +A G+F  
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 420

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDY 713
           M+  G  PN +TYT LI   C+AG     L+L+ EM+   I PD+  +  L  +      
Sbjct: 421 MKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGR 480

Query: 714 KVHAVEYL 721
              A+E L
Sbjct: 481 SARALEIL 488



 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 165/483 (34%), Positives = 253/483 (52%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           PD  +   +I  L   G    AR +++ +   G+ PS V Y +++   C      +A EL
Sbjct: 8   PDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
             +M  RGC P+ VTYNV+I    + G LE+A  LI+ M++ G      +YN ++ G  +
Sbjct: 68  FADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 127

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
              + EAL L  EM   G  P   ++N +I GLC+  ++  A   F EM  K++ PD  S
Sbjct: 128 SSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWS 187

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           Y  L+ G  ++G + EA+ LF  +    + P+ VTYN +I G+C    L+ A +L ++M 
Sbjct: 188 YGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMR 247

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
           ++G  P   T+ I+++  CK G L  A      M   G  PD   Y+T I+G   +    
Sbjct: 248 SKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVD 307

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           +A  L E+M+ +   P ++T N L+HGLCK G ++EA E+L  MV  G  PD +TY +++
Sbjct: 308 DARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLV 367

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
           H     G   R R+L ++M+ +GL+P +VTYT L+       RL  A   F++M+  G  
Sbjct: 368 HGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCA 427

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           PN+ TY ALI G C   ++D    LF +M   GI P+   Y  L  E C +G    AL +
Sbjct: 428 PNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEI 487

Query: 686 YKE 688
            +E
Sbjct: 488 LRE 490



 Score =  272 bits (696), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 160/500 (32%), Positives = 248/500 (49%), Gaps = 4/500 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F  M R G  P     N +I      G   +A ++ + M E G  P +VTYNT++D  C
Sbjct: 67  LFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLC 126

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K   ++EAL L  EM+  GC+PN  ++N +I G  +  +++QA  +  +M    +   + 
Sbjct: 127 KSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSW 186

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           SY  +I G ++ G L EA  L + M+  G+ P+  TYN++I+G+C    + +A   F  M
Sbjct: 187 SYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSM 246

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
             K   P   ++N L+  +C+ G + EAF L   +     VP VVTY+TLI GLC    +
Sbjct: 247 RSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARV 306

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A+ L E+M+ +   P V+T   +++G CK G +  ARE  + M+  G  PD   Y T 
Sbjct: 307 DDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTL 366

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           + G  + G T  A  L  +M+A+G  P+++TY  LV GLCK   L EA  +  +M   G 
Sbjct: 367 VHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGC 426

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            P+  TYT++I      G +  G  LF  M+  G+SP  V Y  L       GR   A  
Sbjct: 427 APNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALE 486

Query: 615 YFSEMQVKGIRPNVI---TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
              E + + +R        Y   ++GL    +++ A G   DM   G LP       L+ 
Sbjct: 487 ILREGR-ESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVA 545

Query: 672 ENCNAGNWQEALRLYKEMLD 691
             C +G   EA  + +E++D
Sbjct: 546 GLCKSGQGGEARAVLEEIMD 565



 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 141/462 (30%), Positives = 242/462 (52%), Gaps = 10/462 (2%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K+ M+E+   +  KM+ +G +PDV   N ++  L  +    +A  ++  M   G  P+  
Sbjct: 92  KRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRR 151

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           ++NT++   C++ ++ +A ++  EM+ +   P+  +Y +LI G ++ G+L +A  L + M
Sbjct: 152 SHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRM 211

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           L  G+  SA +YN +I G      L EAL L + M ++G  P+  T+NILI   CK G++
Sbjct: 212 LDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKL 271

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            +A      M     +PD+++Y+TL+ G C    + +A  L +++  R   PTVVT NTL
Sbjct: 272 DEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTL 331

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           I GLC+ G ++ A+++ + M++ G  PDV+TY  +V+G C+ G    ARE  ++M+ +GL
Sbjct: 332 IHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGL 391

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            P+   YT  ++G  K     EA  +  +M + G  P+L TY  L+ G C  G ++   +
Sbjct: 392 APNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLK 451

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV------TYTV 598
           L  +MV  G  PDH+ Y ++     + G  R  R L   +LR+G             Y  
Sbjct: 452 LFGEMVCAGISPDHVVYGTLAAELCKSG--RSARAL--EILREGRESLRSEAWGDEVYRF 507

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
            +      G++E+A  +  +M   G  P      +L+ GLC+
Sbjct: 508 AVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCK 549



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 136/449 (30%), Positives = 224/449 (49%), Gaps = 21/449 (4%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           ++L   ++S ++Q   VF++M    + PD  +   +I  L   G   +A ++++ M + G
Sbjct: 156 IILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSG 215

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           I PS VTYN ++   C    + EALEL   M+ +GC P+  T+N+LI    + G+L++A 
Sbjct: 216 ITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAF 275

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L++ M   G      +Y+ +I G      + +A +L E+MV R   PT+ T N LI+GL
Sbjct: 276 RLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGL 335

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           CK GR+ +AR     M+     PD+++YNTL++G+CR+G    A  L  ++ +R L P V
Sbjct: 336 CKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNV 395

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           VTY  L+ GLC+   L  A  +   M + G  P++ TYT ++ G C  G +    + F E
Sbjct: 396 VTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGE 455

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL----QEEMLAKGFPPDLITYNVLVHGLC 534
           M+  G+ PD   Y T  A   K G ++ A  +    +E + ++ +  ++  Y   V GL 
Sbjct: 456 MVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEV--YRFAVDGLL 513

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           + G +E A   +R MV  G +P      S++    + G     R +   ++         
Sbjct: 514 EAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMD-------- 565

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKG 623
               L +   ARG+   A  +  EM  KG
Sbjct: 566 ----LAYGGKARGK---AAKFVEEMVGKG 587



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 163/346 (47%), Gaps = 17/346 (4%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
            ++L+  + K+  +++   +  +M  +G +PDV   + +I  L        AR +   M 
Sbjct: 258 FNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMV 317

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
           +   KP++VT NT++   CK G ++EA E+L  M   G SP+ VTYN L+ G  R G+ E
Sbjct: 318 KRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTE 377

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
           +AR L+ DM+  GL  +  +Y  ++ G  +   L EA  +  +M + G AP L TY  LI
Sbjct: 378 RARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALI 437

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS--RN 413
            G C  G+V      F EM+   + PD + Y TL    C+SG    A  +  E R   R+
Sbjct: 438 LGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRS 497

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
                  Y   +DGL   G +E+A     +M+  G LP       +V G CK G    AR
Sbjct: 498 EAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEAR 557

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
               E++         AY  +  G        +A +  EEM+ KG+
Sbjct: 558 AVLEEIM-------DLAYGGKARG--------KAAKFVEEMVGKGY 588


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  322 bits (826), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 168/473 (35%), Positives = 268/473 (56%), Gaps = 2/473 (0%)

Query: 157 GILDVLIGGGLSSCVSIKIL--DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRI 214
           G +D +I      CV   ++  ++++    +   VE  + + + M+  G+ P +   N +
Sbjct: 176 GEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSV 235

Query: 215 IKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGC 274
           +K L  NG   KAREV+R M   G+ P + ++N ++  FC+ GE++EAL    EM+GR  
Sbjct: 236 LKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRV 295

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
           +P+ V+++ LI  F+R GE++ A   +R+M + GL      Y  +I G+   GL++EAL 
Sbjct: 296 TPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALR 355

Query: 335 LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
           + +EMV  G  P + TYN L+ GLCK  R+SDA     EM  + V PD+ ++ TL++GYC
Sbjct: 356 VRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYC 415

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
           R GNI +A   FD +  + L P +VTYNTLIDG+CR GDL  A +L ++M ++ I P+ +
Sbjct: 416 RDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHV 475

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
           TY+I+++  C+ G +  A  F +EM+ KG+ P+   Y + I G  + G+ S+  +   +M
Sbjct: 476 TYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKM 535

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
                 PDLITYN L+HG  K G + EA  LL+ M  +   PD +TY  II      G++
Sbjct: 536 RHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNM 595

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
           +    ++  M  +G+ P   TY  +I+ H   G  + +F    EM  KG+ P+
Sbjct: 596 QEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648



 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 151/457 (33%), Positives = 259/457 (56%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P +VT+N M+D+  + G+++ A+ L+  M  +G  P  VTYN ++ G  RNG  ++AR +
Sbjct: 192 PDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREV 251

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
            R M   G+     S+N +I G+   G L EAL   +EM  R V P + +++ LI    +
Sbjct: 252 FRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTR 311

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G +  A     EM    ++PD + Y  ++ G+CR+G + EA  + DE+ +   +P VVT
Sbjct: 312 RGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVT 371

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YNTL++GLC+   L  A++L   M  +G+ PD+ T+T +++G C+ GN+  A +FF+ + 
Sbjct: 372 YNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTIS 431

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            + L+PD   Y T I G  + GD  +A  L ++M ++   P+ +TY++L+   C+ G ++
Sbjct: 432 DQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVD 491

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
            A   L +MV  G +P+ +TY SII      G++ +G+     M    + P L+TY  LI
Sbjct: 492 NAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLI 551

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
           H +   G++  AF     M+ + ++P+ +TYN +I+G      + +A  ++  M   GI 
Sbjct: 552 HGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIE 611

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           P++YTY  +IN +  AGN +++ +L+ EML + + PD
Sbjct: 612 PDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648



 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 165/532 (31%), Positives = 281/532 (52%)

Query: 174 KILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRM 233
           ++ DLL+  YT+     +    F  +L + +       N ++  L   G+     + YR+
Sbjct: 90  QVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAALSRAGWPHLTADAYRL 149

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           +     + +  T N M+ S+CK  +  E   ++ EM+ R   P+ VT+NV++    R G+
Sbjct: 150 VLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGD 209

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           +E A  LI  M+  G+K    +YN ++ G    G   +A  +   M   GVAP + ++N+
Sbjct: 210 VEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNM 269

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           LI G C+ G + +A   + EM  + V PD++S++ L+  + R G +  A     E+R   
Sbjct: 270 LIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFG 329

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           L+P  V Y  +I G CR G +  A ++++ M+  G LPDV+TY  ++NG CK   LS A 
Sbjct: 330 LMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAE 389

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
           E  NEM  +G+ PD   +TT I G  + G+  +A +  + +  +   PD++TYN L+ G+
Sbjct: 390 ELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGM 449

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
           C+ G L +ANEL   M      P+H+TY+ +I +  E G +       + M+ KG+ P +
Sbjct: 450 CRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNI 509

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
           +TY  +I  +   G +     +  +M+   + P++ITYN LI+G  +  ++ +A+ L   
Sbjct: 510 MTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKI 569

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           ME E + P+  TY ++I+     GN QEA  +YK+M  R IEPD  T+ +++
Sbjct: 570 MENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMI 621



 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 144/495 (29%), Positives = 262/495 (52%)

Query: 168 SSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKA 227
           +S V+   L++++  Y K     +   V ++M +  + PDV   N ++      G    A
Sbjct: 154 NSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAA 213

Query: 228 REVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITG 287
             +   M   GIKP +VTYN++L    + G   +A E+   M   G +P+  ++N+LI G
Sbjct: 214 MALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGG 273

Query: 288 FSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPT 347
           F R GELE+A    ++M    +     S++ +I  ++ +G +  A     EM   G+ P 
Sbjct: 274 FCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPD 333

Query: 348 LATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFD 407
              Y ++I G C+ G + +A     EM+    +PD+++YNTLL G C+   + +A  L +
Sbjct: 334 GVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLN 393

Query: 408 ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG 467
           E++ R + P + T+ TLI G CR G++E A Q  + + +Q + PD++TY  +++G C+ G
Sbjct: 394 EMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQG 453

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
           +L  A E +++M  + + P+   Y+  I    + G    A+   +EM+ KG  P+++TYN
Sbjct: 454 DLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYN 513

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
            ++ G C+ G++ +  + L KM  D  +PD ITY ++IH  ++ G +    +L   M  +
Sbjct: 514 SIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENE 573

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
            + P  VTY ++I   +  G ++ A   + +M  +GI P+  TY ++ING        ++
Sbjct: 574 NVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKS 633

Query: 648 YGLFIDMEEEGILPN 662
           + L  +M ++G+ P+
Sbjct: 634 FQLHDEMLQKGLAPD 648


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  322 bits (825), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 192/624 (30%), Positives = 331/624 (53%), Gaps = 17/624 (2%)

Query: 86  VVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYW 145
           V SD +++  VL  +R  P  +L FF++V  Q   + +   +C ++ IL    +      
Sbjct: 65  VFSD-DIVDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRA 123

Query: 146 VVETVVCV-----NMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKML 200
            +  +V +       + I D L+G       S  + D++L +Y +K + +  L VF+ M 
Sbjct: 124 YLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMG 183

Query: 201 RNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQ 260
           + G +P +++CN ++  L  NG +  A  VY+ M   GI P +   + M+++FCK+G++ 
Sbjct: 184 KCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVD 243

Query: 261 EALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII 320
           EA   + +M+  G  PN VTY+ LI G+   G++E A+G+++ M + G+  +  +Y  +I
Sbjct: 244 EAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLI 303

Query: 321 CGYSEKGLLVEALNLEEEMVTRG------VAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
            GY ++  + EA     E V RG      + P    Y +LI G C+ G++ DA     EM
Sbjct: 304 KGYCKQCKMDEA-----EKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEM 358

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           LR  +  ++   N+L+ GYC+ G I EA  +   +   NL P   +YNTL+DG CR G  
Sbjct: 359 LRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHT 418

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
             A  L + M+ +GI P V+TY  ++ G C++G    A + ++ M+++G+ PD   Y+T 
Sbjct: 419 SEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTL 478

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           + G  K+ +   A  L +++LA+GF    IT+N ++ GLCK+G + EA E+  KM   G 
Sbjct: 479 LDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGC 538

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            PD ITY ++I    +  ++ +   +   M R+ +SP++  Y  LI       RL     
Sbjct: 539 SPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTD 598

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
             +EM ++G+ PN++TY ALI+G C+   +D+A+  + +M E G+  N    + +++   
Sbjct: 599 LLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLY 658

Query: 675 NAGNWQEALRLYKEMLDREIEPDY 698
             G   EA  L ++M+D    PD+
Sbjct: 659 RLGRIDEANLLMQKMVDHGFFPDH 682



 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 170/592 (28%), Positives = 278/592 (46%), Gaps = 67/592 (11%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y +   ++  + + ++MLR GL  ++  CN +I      G   +A  V   M ++ +KP 
Sbjct: 342 YCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPD 401

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             +YNT+LD +C+EG   EA  L  +M   G  P  +TYN L+ G  R G  + A  +  
Sbjct: 402 SYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWH 461

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M+K G+      Y+ ++ G  +      A  L ++++ RG   +  T+N +I GLCK G
Sbjct: 462 LMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMG 521

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           ++ +A   F +M      PD I+Y TL+ GYC++ N+G+AF +   +    + P++  YN
Sbjct: 522 KMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYN 581

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           +LI GL +   L     L   M  +G+ P+++TY  +++G CK G L  A   + EM   
Sbjct: 582 SLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTEN 641

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL------------------- 523
           GL  +    +T ++G  +LG   EA  L ++M+  GF PD                    
Sbjct: 642 GLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADS 701

Query: 524 -------------ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
                        I YN+ + GLCK G +++A      +   GF+PD+ TY ++IH    
Sbjct: 702 LDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSA 761

Query: 571 MGD-----------LRRG------------------------RDLFNNMLRKGLSPTLVT 595
            G+           LRRG                        + LF+ + +KGL P +VT
Sbjct: 762 AGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVT 821

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           Y  LI  +   G ++ AF    +M  +GI P+V+TY+ALINGLC+   I+++  L   M 
Sbjct: 822 YNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMI 881

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLK 707
           + G+      Y  L+     +G  Q+  +LY  M  R +     +H  + L+
Sbjct: 882 KAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIRCLSTTAISHKQVDLR 933



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 155/509 (30%), Positives = 252/509 (49%), Gaps = 40/509 (7%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL  Y ++    +   + +KML+ G+ P V   N ++K L   G    A +++ +M + G
Sbjct: 408 LLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRG 467

Query: 239 IKP-----------------------------------SIVTYNTMLDSFCKEGEMQEAL 263
           + P                                   S +T+NTM+   CK G+M EA 
Sbjct: 468 VAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAE 527

Query: 264 ELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGY 323
           E+  +M+  GCSP+G+TY  LI G+ +   + QA  +   M +  +  S   YN +I G 
Sbjct: 528 EIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGL 587

Query: 324 SEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
            +   LVE  +L  EM  RG+ P + TY  LI G CK G +  A   +FEM    +  +I
Sbjct: 588 FKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANI 647

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE-VAQQLKE 442
           I  +T++ G  R G I EA LL  ++      P    +   +    RY  ++ +A  L E
Sbjct: 648 IICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD---HECFLKSDIRYAAIQKIADSLDE 704

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
           +     +LP+ I Y I + G CK G +  AR FF+ +  KG  PD F Y T I G    G
Sbjct: 705 S-CKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAG 763

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
           +  EA+RL++EML +G  P+++TYN L++GLCK  +++ A  L  K+   G  P+ +TY 
Sbjct: 764 NVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYN 823

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
           ++I    ++G++     L + M+ +G+SP++VTY+ LI+     G +E +    ++M   
Sbjct: 824 TLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKA 883

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLF 651
           G+   +I Y  L+ G  R   + + + L+
Sbjct: 884 GVDSKLIEYCTLVQGYIRSGEMQKIHKLY 912



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/434 (24%), Positives = 199/434 (45%), Gaps = 23/434 (5%)

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           PN  +Y  L+   SR    ++ R  +  ++ L             C + ++G ++     
Sbjct: 100 PNVKSYCKLVHILSRGRMYDETRAYLNQLVDL-------------CKFKDRGNVIWD--- 143

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
           E   V R  A +   +++++    + G   +A + F  M +   IP + S N+LL    +
Sbjct: 144 ELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVK 203

Query: 396 SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
           +G    A  ++ ++    +VP V   + +++  C+ G ++ A    + M N G+ P+++T
Sbjct: 204 NGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVT 263

Query: 456 YTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR----LQ 511
           Y  ++NG   +G++  A+     M  KG+  +   YT  I G  K     EA +    +Q
Sbjct: 264 YHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQ 323

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
           EE       PD   Y VL+ G C+ G +++A  LL +M+  G   +     S+I+   + 
Sbjct: 324 EE---AALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKR 380

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
           G++     +   M+   L P   +Y  L+  +   G    AF    +M  +GI P V+TY
Sbjct: 381 GEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTY 440

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           N L+ GLCR+   D A  ++  M + G+ P++  Y+ L++      N++ A  L+K++L 
Sbjct: 441 NTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILA 500

Query: 692 REIEPDYCTHSALL 705
           R       T + ++
Sbjct: 501 RGFTKSRITFNTMI 514


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  322 bits (824), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 192/624 (30%), Positives = 331/624 (53%), Gaps = 17/624 (2%)

Query: 86  VVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYW 145
           V SD +++  VL  +R  P  +L FF++V  Q   + +   +C ++ IL    +      
Sbjct: 31  VFSD-DIVDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRA 89

Query: 146 VVETVVCV-----NMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKML 200
            +  +V +       + I D L+G       S  + D++L +Y +K + +  L VF+ M 
Sbjct: 90  YLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMG 149

Query: 201 RNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQ 260
           + G +P +++CN ++  L  NG +  A  VY+ M   GI P +   + M+++FCK+G++ 
Sbjct: 150 KCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVD 209

Query: 261 EALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII 320
           EA   + +M+  G  PN VTY+ LI G+   G++E A+G+++ M + G+  +  +Y  +I
Sbjct: 210 EAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLI 269

Query: 321 CGYSEKGLLVEALNLEEEMVTRG------VAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
            GY ++  + EA     E V RG      + P    Y +LI G C+ G++ DA     EM
Sbjct: 270 KGYCKQCKMDEA-----EKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEM 324

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           LR  +  ++   N+L+ GYC+ G I EA  +   +   NL P   +YNTL+DG CR G  
Sbjct: 325 LRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHT 384

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
             A  L + M+ +GI P V+TY  ++ G C++G    A + ++ M+++G+ PD   Y+T 
Sbjct: 385 SEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTL 444

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           + G  K+ +   A  L +++LA+GF    IT+N ++ GLCK+G + EA E+  KM   G 
Sbjct: 445 LDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGC 504

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            PD ITY ++I    +  ++ +   +   M R+ +SP++  Y  LI       RL     
Sbjct: 505 SPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTD 564

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
             +EM ++G+ PN++TY ALI+G C+   +D+A+  + +M E G+  N    + +++   
Sbjct: 565 LLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLY 624

Query: 675 NAGNWQEALRLYKEMLDREIEPDY 698
             G   EA  L ++M+D    PD+
Sbjct: 625 RLGRIDEANLLMQKMVDHGFFPDH 648



 Score =  292 bits (748), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 196/695 (28%), Positives = 321/695 (46%), Gaps = 124/695 (17%)

Query: 126 VFCTILEILIESGLLRSAYWVVETV-VCVNM------HGILDVLIGGGLSSCV------- 171
           VF  IL++ +E GL ++A +V + +  C  +      + +L+ L+  G +          
Sbjct: 124 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 183

Query: 172 -------SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS 224
                   + ++ +++  + K   V++      KM   G+ P++   + +I      G  
Sbjct: 184 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDV 243

Query: 225 VKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGC-SPNGVTYNV 283
             A+ V + M E G+  ++VTY  ++  +CK+ +M EA ++L  MQ      P+   Y V
Sbjct: 244 EAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGV 303

Query: 284 LITGFSRNGELEQARGLIRDMLKLGLKVS------------------------------- 312
           LI G+ R G+++ A  L+ +ML+LGLK +                               
Sbjct: 304 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 363

Query: 313 ----AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
               ++SYN ++ GY  +G   EA NL ++M+  G+ PT+ TYN L+ GLC+ G   DA 
Sbjct: 364 LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDAL 423

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             +  M+++ V PD + Y+TLL G  +  N   A  L+ ++ +R    + +T+NT+I GL
Sbjct: 424 QIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGL 483

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G +  A+++ + M + G  PD ITY  +++G CK  N+  A +    M R+ + P  
Sbjct: 484 CKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSI 543

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK------------- 535
             Y + I+G  K     E   L  EM  +G  P+++TY  L+ G CK             
Sbjct: 544 EMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFE 603

Query: 536 ----------------------LGSLEEANELLRKMVGDGFIPDH--------------- 558
                                 LG ++EAN L++KMV  GF PDH               
Sbjct: 604 MTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQK 663

Query: 559 -----------------ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
                            I Y   I    + G +   R  F+ +  KG  P   TY  LIH
Sbjct: 664 IADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIH 723

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
            ++A G ++ AF    EM  +G+ PN++TYNALINGLC+   +D+A  LF  + ++G+ P
Sbjct: 724 GYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFP 783

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
           N  TY  LI+  C  GN   A +L  +M++  I P
Sbjct: 784 NVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISP 818



 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 159/512 (31%), Positives = 257/512 (50%), Gaps = 32/512 (6%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y +   ++  + + ++MLR GL  ++  CN +I      G   +A  V   M ++ +KP 
Sbjct: 308 YCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPD 367

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             +YNT+LD +C+EG   EA  L  +M   G  P  +TYN L+ G  R G  + A  +  
Sbjct: 368 SYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWH 427

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M+K G+      Y+ ++ G  +      A  L ++++ RG   +  T+N +I GLCK G
Sbjct: 428 LMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMG 487

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           ++ +A   F +M      PD I+Y TL+ GYC++ N+G+AF +   +    + P++  YN
Sbjct: 488 KMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYN 547

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           +LI GL +   L     L   M  +G+ P+++TY  +++G CK G L  A   + EM   
Sbjct: 548 SLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTEN 607

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL------------------- 523
           GL  +    +T ++G  +LG   EA  L ++M+  GF PD                    
Sbjct: 608 GLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADS 667

Query: 524 -------------ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
                        I YN+ + GLCK G +++A      +   GF+PD+ TY ++IH    
Sbjct: 668 LDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSA 727

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
            G++     L + MLR+GL P +VTY  LI+       ++ A   F ++  KG+ PNV+T
Sbjct: 728 AGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVT 787

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
           YN LI+G C++  +D A+ L   M EEGI P+
Sbjct: 788 YNTLIDGYCKIGNMDAAFKLKDKMIEEGISPS 819



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 140/451 (31%), Positives = 224/451 (49%), Gaps = 40/451 (8%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL  Y ++    +   + +KML+ G+ P V   N ++K L   G    A +++ +M + G
Sbjct: 374 LLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRG 433

Query: 239 IKP-----------------------------------SIVTYNTMLDSFCKEGEMQEAL 263
           + P                                   S +T+NTM+   CK G+M EA 
Sbjct: 434 VAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAE 493

Query: 264 ELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGY 323
           E+  +M+  GCSP+G+TY  LI G+ +   + QA  +   M +  +  S   YN +I G 
Sbjct: 494 EIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGL 553

Query: 324 SEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
            +   LVE  +L  EM  RG+ P + TY  LI G CK G +  A   +FEM    +  +I
Sbjct: 554 FKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANI 613

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE-VAQQLKE 442
           I  +T++ G  R G I EA LL  ++      P    +   +    RY  ++ +A  L E
Sbjct: 614 IICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD---HECFLKSDIRYAAIQKIADSLDE 670

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
           +     +LP+ I Y I + G CK G +  AR FF+ +  KG  PD F Y T I G    G
Sbjct: 671 S-CKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAG 729

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
           +  EA+RL++EML +G  P+++TYN L++GLCK  +++ A  L  K+   G  P+ +TY 
Sbjct: 730 NVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYN 789

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
           ++I    ++G++     L + M+ +G+SP++
Sbjct: 790 TLIDGYCKIGNMDAAFKLKDKMIEEGISPSI 820



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/434 (24%), Positives = 199/434 (45%), Gaps = 23/434 (5%)

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           PN  +Y  L+   SR    ++ R  +  ++ L             C + ++G ++     
Sbjct: 66  PNVKSYCKLVHILSRGRMYDETRAYLNQLVDL-------------CKFKDRGNVIWD--- 109

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
           E   V R  A +   +++++    + G   +A + F  M +   IP + S N+LL    +
Sbjct: 110 ELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVK 169

Query: 396 SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
           +G    A  ++ ++    +VP V   + +++  C+ G ++ A    + M N G+ P+++T
Sbjct: 170 NGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVT 229

Query: 456 YTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR----LQ 511
           Y  ++NG   +G++  A+     M  KG+  +   YT  I G  K     EA +    +Q
Sbjct: 230 YHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQ 289

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
           EE       PD   Y VL+ G C+ G +++A  LL +M+  G   +     S+I+   + 
Sbjct: 290 EE---AALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKR 346

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
           G++     +   M+   L P   +Y  L+  +   G    AF    +M  +GI P V+TY
Sbjct: 347 GEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTY 406

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           N L+ GLCR+   D A  ++  M + G+ P++  Y+ L++      N++ A  L+K++L 
Sbjct: 407 NTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILA 466

Query: 692 REIEPDYCTHSALL 705
           R       T + ++
Sbjct: 467 RGFTKSRITFNTMI 480


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  321 bits (822), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 211/671 (31%), Positives = 332/671 (49%), Gaps = 63/671 (9%)

Query: 73  FCNNRW---VSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCT 129
            CN+ W    SD  + ++ + +  + VL  I       ++ +R     P           
Sbjct: 102 LCNSNWYGPASDLIKCIIRNSDSPLAVLGSI-------VKCYRSCNGSPN--------SV 146

Query: 130 ILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMV 189
           I ++L++S   R   ++VE V      G  +      L SC S+ + DLL     K + V
Sbjct: 147 IFDMLMDS--YRKMGFLVEAVNV--FLGPKNFEFRPSLLSCNSL-LGDLL-----KGNKV 196

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           E    VF+ M  + +LPDV     +I      G    A+ V   MGE G  P++VTYN +
Sbjct: 197 ELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVI 256

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           +   C+   + EA+EL   M  +G  P+  TY++LI GF       +A+ ++ +M+ +GL
Sbjct: 257 IGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGL 316

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
           K    +YN +I G+  +G + +A  +++EMV  G+   L  +N L+ G+CK G++  A  
Sbjct: 317 KPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALE 376

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
              EM+ K V PD  +Y+ L+ G+CR  N+  AF L DE++ R L PTV+TY+ +I+GLC
Sbjct: 377 IMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLC 436

Query: 430 RYGDL-----------------------------------EVAQQLKENMINQGILPDVI 454
           R G+L                                   E ++ + E M  QGILPDV 
Sbjct: 437 RCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVF 496

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
            Y  ++ G CK   +  AR +  EML + L+P+   Y   I G  K G+   A R   EM
Sbjct: 497 CYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEM 556

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
           L+ G  P++  Y  L+ G CK G++ EA  + R ++    + D  TY+ +IH     G +
Sbjct: 557 LSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKM 616

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
                +F+ +  KGL P   TY  LI     +G ++ A     EM +KGI P+++TYN L
Sbjct: 617 HEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNIL 676

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           I+GLC+   I++A  LF D+E  G+ PN  TY  +++  C + N   A +L +EML R +
Sbjct: 677 IDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGV 736

Query: 695 EPDYCTHSALL 705
            PD   ++ +L
Sbjct: 737 PPDAFIYNVIL 747



 Score =  307 bits (786), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 177/532 (33%), Positives = 290/532 (54%), Gaps = 7/532 (1%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           + ++M +  L P V   + II  L   G       + R M   G+KP+ V Y T++ +  
Sbjct: 412 LLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHA 471

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           KEG ++E+  +L  M+ +G  P+   YN LI GF +   +E+AR  + +ML+  L+ +AH
Sbjct: 472 KEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAH 531

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +Y   I GYS+ G +  A     EM++ GV P +  Y  LI G CK G V++A   F  +
Sbjct: 532 TYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFI 591

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           L + V+ D+ +Y+ L++G  R+G + EAF +F EL+ + L+P   TYN+LI G C+ G++
Sbjct: 592 LSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNV 651

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A QL E M  +GI PD++TY I+++G CK G +  A+  F+++  +GL P+   Y   
Sbjct: 652 DKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAM 711

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           + G  K  + + A++L EEML +G PPD   YNV+++  CK    E+A +L ++M+  GF
Sbjct: 712 VDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF 771

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
               +++ ++I    + G L+    L   M+ K   P  VTYT LI  +   G +  A  
Sbjct: 772 -ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKR 830

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            + EMQ + + P   TY +L++G   +  + +   LF +M  +GI P+K TY ++I+  C
Sbjct: 831 LWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYC 890

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
             GN  EA +L  E+L + +      + AL+     K+      E+ E L L
Sbjct: 891 REGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKE------EFFEVLKL 936



 Score =  295 bits (756), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 175/564 (31%), Positives = 284/564 (50%), Gaps = 36/564 (6%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           D+L+  +  +    +  L+  +M+  GL P+    N +I      G   +A  +   M  
Sbjct: 289 DILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVA 348

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            GI+ +++ +NT+L+  CK G+M++ALE++ EM  +G  P+  TY++LI G  R   + +
Sbjct: 349 CGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMAR 408

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  L+ +M K  L  +  +Y+ II G    G L     +  EMV  G+ P    Y  L+ 
Sbjct: 409 AFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMT 468

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
              K GRV ++R     M  + ++PD+  YN+L+ G+C++  + EA     E+  R L P
Sbjct: 469 AHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRP 528

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE-- 474
              TY   IDG  + G++E+A +    M++ G+LP+V  YT ++ G CK GN++ A    
Sbjct: 529 NAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVF 588

Query: 475 ---------------------------------FFNEMLRKGLQPDRFAYTTQIAGELKL 501
                                             F+E+  KGL P+ F Y + I+G  K 
Sbjct: 589 RFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQ 648

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
           G+  +A +L EEM  KG  PD++TYN+L+ GLCK G +E A  L   + G G  P+ +TY
Sbjct: 649 GNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTY 708

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
            +++    +  +      L   ML +G+ P    Y V+++      + E A   F EM  
Sbjct: 709 AAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLE 768

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
           KG   + +++N LI G C+  ++ +A  L  +M E+  +PN  TYT LI+ NC AG   E
Sbjct: 769 KGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGE 827

Query: 682 ALRLYKEMLDREIEPDYCTHSALL 705
           A RL+ EM +R + P   T+++LL
Sbjct: 828 AKRLWLEMQERNVMPTAKTYTSLL 851



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 162/576 (28%), Positives = 272/576 (47%), Gaps = 41/576 (7%)

Query: 152  CVNMHG---ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDV 208
            C N+ G   IL  ++  GL    +  +   L+  + K+  VE+  ++  +M   G+LPDV
Sbjct: 438  CGNLQGTNAILREMVMNGLKP--NAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDV 495

Query: 209  KNCNRII---------------------KVLRDNGFSVKAR-EVYRMMGEF--------- 237
               N +I                     + LR N  +  A  + Y   GE          
Sbjct: 496  FCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNE 555

Query: 238  ----GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
                G+ P++  Y  +++  CKEG + EA  +   +  R    +  TY+VLI G SRNG+
Sbjct: 556  MLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGK 615

Query: 294  LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
            + +A G+  ++ + GL  +A +YN +I G  ++G + +A  L EEM  +G+ P + TYNI
Sbjct: 616  MHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNI 675

Query: 354  LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
            LI GLCK G +  A++ F ++  + + P+ ++Y  ++ GYC+S N   AF L +E+  R 
Sbjct: 676  LIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRG 735

Query: 414  LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
            + P    YN +++  C+    E A  L + M+ +G     +++  ++ G CK G L  A 
Sbjct: 736  VPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG-FASTVSFNTLIEGYCKSGKLQEAN 794

Query: 474  EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
                EM+ K   P+   YT+ I    K G   EA RL  EM  +   P   TY  L+HG 
Sbjct: 795  HLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGY 854

Query: 534  CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
              +G++ E + L  +MV  G  PD +TY  +I A    G++     L + +L KG+  ++
Sbjct: 855  HNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSV 914

Query: 594  VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
              Y  LI A   +          +E+   G R  + T + +  G      +D+A  +   
Sbjct: 915  AAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRS 974

Query: 654  MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
            M + G + N  +   L++ N N  N +++  L K+M
Sbjct: 975  MVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 1010



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 185/363 (50%), Gaps = 2/363 (0%)

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
           +P    +++L+    K G + +A + F         P ++S N+LL G    GN  E F 
Sbjct: 142 SPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLL-GDLLKGNKVELFW 200

Query: 405 -LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
            +FD + +  ++P V TY  +I   C+ G+++ A+++   M  +G  P+++TY +++ G 
Sbjct: 201 KVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGL 260

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
           C+   L  A E    M+ KGL PD + Y   I G      + EA  +  EM+  G  P+ 
Sbjct: 261 CRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEP 320

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
           ITYN L+ G  + G +E+A  +  +MV  G   + I + ++++   + G + +  ++   
Sbjct: 321 ITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQE 380

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           M+ KG+ P   TY++LI  H     +  AF    EM+ + + P V+TY+ +INGLCR   
Sbjct: 381 MMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGN 440

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSA 703
           +     +  +M   G+ PN   YT L+  +   G  +E+  + + M ++ I PD   +++
Sbjct: 441 LQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNS 500

Query: 704 LLL 706
           L++
Sbjct: 501 LII 503



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 146/315 (46%), Gaps = 35/315 (11%)

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
           RS N  P  V ++ L+D   + G L  A  +     N    P +++   ++    K   +
Sbjct: 137 RSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKV 196

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
            +  + F+ M    + PD + YT  I+   K+G+  +A R+  EM  KG  P+L+TYNV+
Sbjct: 197 ELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVI 256

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           + GLC+   L+EA EL R                                   +M+ KGL
Sbjct: 257 IGGLCRARLLDEAIELKR-----------------------------------SMVDKGL 281

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
            P L TY +LI+      R   A +   EM   G++P  ITYNALI+G  R   I+QA+ 
Sbjct: 282 VPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFR 341

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQL 709
           +  +M   GI  N   +  L+N  C AG  ++AL + +EM+++ +EPD  T+S L+    
Sbjct: 342 IKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHC 401

Query: 710 DKDYKVHAVEYLESL 724
                  A E L+ +
Sbjct: 402 RGQNMARAFELLDEM 416


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 192/624 (30%), Positives = 330/624 (52%), Gaps = 17/624 (2%)

Query: 86  VVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYW 145
           V SD +++  VL  +R  P  +L FF++V  Q   + +   +C ++ IL    +      
Sbjct: 65  VFSD-DIVDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRA 123

Query: 146 VVETVVCV-----NMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKML 200
            +  +V +       + I D L+G       S  + D++L +Y +K + +  L VF+ M 
Sbjct: 124 YLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMG 183

Query: 201 RNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQ 260
           + G +P +++CN ++  L  NG +  A  VY+ M   GI P +   + M+++FCK+G++ 
Sbjct: 184 KCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVD 243

Query: 261 EALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII 320
           EA   + +M+  G  PN VTY+ LI G+   G++E A+G+++ M + G+  +  +Y  +I
Sbjct: 244 EAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLI 303

Query: 321 CGYSEKGLLVEALNLEEEMVTRG------VAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
            GY ++  + EA     E V RG      + P    Y +LI G C+ G++ DA     EM
Sbjct: 304 KGYCKQCKMDEA-----EKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEM 358

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           LR  +  ++   N+L+ GYC+ G I EA  +   +   NL P   +YNTL+DG CR G  
Sbjct: 359 LRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHT 418

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
             A  L + M+ +GI P V+TY  ++ G C++G    A + ++ M++ G+ PD   Y+T 
Sbjct: 419 SEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTL 478

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           + G  K+ +   A  L +++LA+GF    IT+N ++ GLCK+G + EA E+  KM   G 
Sbjct: 479 LDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGC 538

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            PD ITY ++I    +  ++ +   +   M R+ +SP++  Y  LI       RL     
Sbjct: 539 SPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTD 598

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
             +EM ++G+ PN++TY ALI+G C+   +D+A+  + +M E G+  N    + +++   
Sbjct: 599 LLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLY 658

Query: 675 NAGNWQEALRLYKEMLDREIEPDY 698
             G   EA  L ++M+D    PD+
Sbjct: 659 RLGRIDEANLLMQKMVDHGFFPDH 682



 Score =  298 bits (764), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 199/704 (28%), Positives = 325/704 (46%), Gaps = 124/704 (17%)

Query: 126 VFCTILEILIESGLLRSAYWVVETV-------VCVNMHGILDVLIGGGLSSCV------- 171
           VF  IL++ +E GL ++A +V + +          + + +L+ L+  G +          
Sbjct: 158 VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQM 217

Query: 172 -------SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS 224
                   + ++ +++  + K   V++      KM   G+ P++   + +I      G  
Sbjct: 218 IRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDV 277

Query: 225 VKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGC-SPNGVTYNV 283
             A+ V + M E G+  ++VTY  ++  +CK+ +M EA ++L  MQ      P+   Y V
Sbjct: 278 EAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGV 337

Query: 284 LITGFSRNGELEQARGLIRDMLKLGLKVS------------------------------- 312
           LI G+ R G+++ A  L+ +ML+LGLK +                               
Sbjct: 338 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 397

Query: 313 ----AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
               ++SYN ++ GY  +G   EA NL ++M+  G+ PT+ TYN L+ GLC+ G   DA 
Sbjct: 398 LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDAL 457

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             +  M++  V PD + Y+TLL G  +  N   A  L+ ++ +R    + +T+NT+I GL
Sbjct: 458 QIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGL 517

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G +  A+++ + M + G  PD ITY  +++G CK  N+  A +    M R+ + P  
Sbjct: 518 CKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSI 577

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK------------- 535
             Y + I+G  K     E   L  EM  +G  P+++TY  L+ G CK             
Sbjct: 578 EMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFE 637

Query: 536 ----------------------LGSLEEANELLRKMVGDGFIPDH--------------- 558
                                 LG ++EAN L++KMV  GF PDH               
Sbjct: 638 MTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQK 697

Query: 559 -----------------ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
                            I Y   I    + G +   R  F+ +  KG  P   TY  LIH
Sbjct: 698 IADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIH 757

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
            ++A G ++ AF    EM  +G+ PN++TYNALINGLC+   +D+A  LF  + ++G+ P
Sbjct: 758 GYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFP 817

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           N  TY  LI+  C  GN   A +L  +M++  I P   T+SAL+
Sbjct: 818 NVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALI 861



 Score =  293 bits (749), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 171/553 (30%), Positives = 280/553 (50%), Gaps = 35/553 (6%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y +   ++  + + ++MLR GL  ++  CN +I      G   +A  V   M ++ +KP 
Sbjct: 342 YCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPD 401

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             +YNT+LD +C+EG   EA  L  +M   G  P  +TYN L+ G  R G  + A  +  
Sbjct: 402 SYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWH 461

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M+K G+      Y+ ++ G  +      A  L ++++ RG   +  T+N +I GLCK G
Sbjct: 462 LMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMG 521

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           ++ +A   F +M      PD I+Y TL+ GYC++ N+G+AF +   +    + P++  YN
Sbjct: 522 KMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYN 581

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           +LI GL +   L     L   M  +G+ P+++TY  +++G CK G L  A   + EM   
Sbjct: 582 SLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTEN 641

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL------------------- 523
           GL  +    +T ++G  +LG   EA  L ++M+  GF PD                    
Sbjct: 642 GLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADS 701

Query: 524 -------------ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
                        I YN+ + GLCK G +++A      +   GF+PD+ TY ++IH    
Sbjct: 702 LDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSA 761

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
            G++     L + MLR+GL P +VTY  LI+       ++ A   F ++  KG+ PNV+T
Sbjct: 762 AGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVT 821

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           YN LI+G C++  +D A+ L   M EEGI P+  TY+ LIN  C  G+ + +++L  +M+
Sbjct: 822 YNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMI 881

Query: 691 DREIEP---DYCT 700
              ++    +YCT
Sbjct: 882 KAGVDSKLIEYCT 894



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 153/495 (30%), Positives = 246/495 (49%), Gaps = 40/495 (8%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL  Y ++    +   + +KML+ G+ P V   N ++K L   G    A +++ +M + G
Sbjct: 408 LLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXG 467

Query: 239 IKP-----------------------------------SIVTYNTMLDSFCKEGEMQEAL 263
           + P                                   S +T+NTM+   CK G+M EA 
Sbjct: 468 VAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAE 527

Query: 264 ELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGY 323
           E+  +M+  GCSP+G+TY  LI G+ +   + QA  +   M +  +  S   YN +I G 
Sbjct: 528 EIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGL 587

Query: 324 SEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
            +   LVE  +L  EM  RG+ P + TY  LI G CK G +  A   +FEM    +  +I
Sbjct: 588 FKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANI 647

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE-VAQQLKE 442
           I  +T++ G  R G I EA LL  ++      P    +   +    RY  ++ +A  L E
Sbjct: 648 IICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD---HECFLKSDIRYAAIQKIADSLDE 704

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
           +     +LP+ I Y I + G CK G +  AR FF+ +  KG  PD F Y T I G    G
Sbjct: 705 S-CKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAG 763

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
           +  EA+RL++EML +G  P+++TYN L++GLCK  +++ A  L  K+   G  P+ +TY 
Sbjct: 764 NVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYN 823

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
           ++I    ++G++     L + M+ +G+SP++VTY+ LI+     G +E +    ++M   
Sbjct: 824 TLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKA 883

Query: 623 GIRPNVITYNALING 637
           G+   +I Y  L+ G
Sbjct: 884 GVDSKLIEYCTLVQG 898



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 124/363 (34%), Positives = 197/363 (54%), Gaps = 5/363 (1%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K S V Q   V   M R  + P ++  N +I  L  +   V+  ++   MG  G+ P+
Sbjct: 552 YCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPN 611

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           IVTY  ++D +CKEG + +A    +EM   G S N +  + +++G  R G +++A  L++
Sbjct: 612 IVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQ 671

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M+  G       +      Y+    + ++L   +E     + P    YNI I GLCK G
Sbjct: 672 KMVDHGFFPDHECFLKSDIRYAAIQKIADSL---DESCKTFLLPNNIVYNIAIAGLCKTG 728

Query: 363 RVSDARHRFFEMLR-KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           +V DAR RFF ML  K  +PD  +Y TL++GY  +GN+ EAF L DE+  R LVP +VTY
Sbjct: 729 KVDDAR-RFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTY 787

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           N LI+GLC+  +++ AQ+L   +  +G+ P+V+TY  +++G CK+GN+  A +  ++M+ 
Sbjct: 788 NALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIE 847

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
           +G+ P    Y+  I G  K GD   + +L  +M+  G    LI Y  LV G  K  +  E
Sbjct: 848 EGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKTSNYNE 907

Query: 542 ANE 544
            ++
Sbjct: 908 MSK 910



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/434 (24%), Positives = 199/434 (45%), Gaps = 23/434 (5%)

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           PN  +Y  L+   SR    ++ R  +  ++ L             C + ++G ++     
Sbjct: 100 PNVKSYCKLVHILSRGRMYDETRAYLNQLVDL-------------CKFKDRGNVIWD--- 143

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
           E   V R  A +   +++++    + G   +A + F  M +   IP + S N+LL    +
Sbjct: 144 ELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVK 203

Query: 396 SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
           +G    A  ++ ++    +VP V   + +++  C+ G ++ A    + M N G+ P+++T
Sbjct: 204 NGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVT 263

Query: 456 YTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR----LQ 511
           Y  ++NG   +G++  A+     M  KG+  +   YT  I G  K     EA +    +Q
Sbjct: 264 YHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQ 323

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
           EE       PD   Y VL+ G C+ G +++A  LL +M+  G   +     S+I+   + 
Sbjct: 324 EE---AALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKR 380

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
           G++     +   M+   L P   +Y  L+  +   G    AF    +M  +GI P V+TY
Sbjct: 381 GEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTY 440

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           N L+ GLCR+   D A  ++  M + G+ P++  Y+ L++      N++ A  L+K++L 
Sbjct: 441 NTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILA 500

Query: 692 REIEPDYCTHSALL 705
           R       T + ++
Sbjct: 501 RGFTKSRITFNTMI 514


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 172/511 (33%), Positives = 283/511 (55%), Gaps = 1/511 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +  KM  +GL P+V   + +I      G   +AR +   M   G+ P I  YN ++    
Sbjct: 371 LLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLS 430

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K G+M+EA   L E+QGRG  P+ VT+   I G+S+ G++ +A     +ML  GL  +  
Sbjct: 431 KAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNP 490

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
            Y  +I G+ + G L+EAL++   +   GV P + T +  I+GL K GRV +A   F E+
Sbjct: 491 LYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL 550

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
             K ++PD+ +Y++L+ G+C+ G + +AF L DE+  + + P +  YN L+DGLC+ GD+
Sbjct: 551 KEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDI 610

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A++L + M  +G+ PD +TY+ M++G CK  N++ A   F+EM  KG+QP  F Y   
Sbjct: 611 QRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNAL 670

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           + G  K GD  +A  L  EML KGF   L ++N L+ G CK   ++EA++L ++M+    
Sbjct: 671 VHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQI 729

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
           +PDH+TYT++I    + G +     LF  M  + L    VTYT L++ +   G+    F 
Sbjct: 730 MPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFA 789

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F +M  KG++P+ +TY  +I   C+   + +A+ L  ++  +G+L     + +LI   C
Sbjct: 790 LFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALC 849

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
              +  EA +L  EM +  ++P     S L+
Sbjct: 850 KREDLTEASKLLDEMGELGLKPSLAACSTLV 880



 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 170/547 (31%), Positives = 295/547 (53%), Gaps = 1/547 (0%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           LL+  Y ++  + + L + ++M +  L+P   +   +I  L        A ++   M   
Sbjct: 319 LLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFS 378

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G+KP++V Y+T++  +  EG ++EA  LL  M   G +P+   YN +I+  S+ G++E+A
Sbjct: 379 GLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 438

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
              + ++   GLK  A ++   I GYS+ G + EA    +EM+  G+ P    Y +LI G
Sbjct: 439 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 498

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
             K G + +A   F  +    V+PD+ + +  ++G  ++G + EA  +F EL+ + LVP 
Sbjct: 499 HFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 558

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           V TY++LI G C+ G++E A +L + M  +GI P++  Y  +V+G CK G++  AR+ F+
Sbjct: 559 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 618

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            M  KGL+PD   Y+T I G  K  + +EA+ L  EM +KG  P    YN LVHG CK G
Sbjct: 619 GMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEG 678

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            +E+A  L R+M+  GF    +++ ++I    +   ++    LF  M+ K + P  VTYT
Sbjct: 679 DMEKAMNLFREMLQKGFATT-LSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYT 737

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
            +I  H   G++E A + F EMQ + +  + +TY +L+ G  +L +  + + LF  M  +
Sbjct: 738 TVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAK 797

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHA 717
           G+ P++ TY ++I  +C   N  EA +L  E++ + +      H  L+     ++    A
Sbjct: 798 GVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEA 857

Query: 718 VEYLESL 724
            + L+ +
Sbjct: 858 SKLLDEM 864



 Score =  302 bits (774), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 172/523 (32%), Positives = 283/523 (54%), Gaps = 1/523 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + ++  +++ L + + M+  G+  ++   N +I  L   G   KA E+ + M   G KP+
Sbjct: 254 FMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPN 313

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             T+  +++ +C+E  M  ALELL EM+ R   P+ V+Y  +I G     +L  A  L+ 
Sbjct: 314 SRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLE 373

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M   GLK +   Y+ +I GY+ +G + EA  L + M   GVAP +  YN +I  L K G
Sbjct: 374 KMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAG 433

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           ++ +A     E+  + + PD +++   + GY ++G + EA   FDE+    L+P    Y 
Sbjct: 434 KMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYT 493

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            LI+G  + G+L  A  +  ++   G+LPDV T +  ++G  K G +  A + F+E+  K
Sbjct: 494 VLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEK 553

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           GL PD F Y++ I+G  K G+  +A+ L +EM  KG  P++  YN LV GLCK G ++ A
Sbjct: 554 GLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRA 613

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            +L   M   G  PD +TY+++I    +  ++     LF+ M  KG+ P    Y  L+H 
Sbjct: 614 RKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHG 673

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
               G +E A   F EM  KG     +++N LI+G C+  +I +A  LF +M  + I+P+
Sbjct: 674 CCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPD 732

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             TYT +I+ +C AG  +EA  L+KEM +R +  D  T+++L+
Sbjct: 733 HVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLM 775



 Score =  297 bits (760), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 169/512 (33%), Positives = 270/512 (52%), Gaps = 1/512 (0%)

Query: 194 LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
           L F +M + GL PD   C+ +I      G   +   +  +M   GI  +++TYN ++   
Sbjct: 230 LTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGL 289

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           CK G+M++A E+L  M   GC PN  T+ +LI G+ R   + +A  L+ +M K  L  SA
Sbjct: 290 CKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSA 349

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
            SY  +I G      L  A  L E+M   G+ P +  Y+ LI G    GR+ +AR     
Sbjct: 350 VSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDG 409

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M    V PDI  YN ++    ++G + EA     E++ R L P  VT+   I G  + G 
Sbjct: 410 MSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGK 469

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           +  A +  + M++ G++P+   YT+++NG  K GNL  A   F  +   G+ PD    + 
Sbjct: 470 MTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSA 529

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            I G LK G   EA ++  E+  KG  PD+ TY+ L+ G CK G +E+A EL  +M   G
Sbjct: 530 FIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKG 589

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
             P+   Y +++    + GD++R R LF+ M  KGL P  VTY+ +I  +     +  AF
Sbjct: 590 IAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAF 649

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
             F EM  KG++P+   YNAL++G C+   +++A  LF +M ++G      ++  LI+  
Sbjct: 650 SLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG-FATTLSFNTLIDGY 708

Query: 674 CNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           C +   QEA +L++EM+ ++I PD+ T++ ++
Sbjct: 709 CKSCKIQEASQLFQEMIAKQIMPDHVTYTTVI 740



 Score =  285 bits (729), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 188/667 (28%), Positives = 322/667 (48%), Gaps = 69/667 (10%)

Query: 48  SVLNPESESY-YKELIISTVEEKPWAFCNNRWVSDHFQAVVSDPELLVRVLNRIR-EKPR 105
           S   P SE+  + + I   +++  W       VS H  + + +P+++  VL++ +   P+
Sbjct: 30  STSTPTSETLNFSQQISDFLKQNNW---KTIMVSSHIPSKL-NPDVIRAVLHQNQVGDPK 85

Query: 106 IALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCV--NMHGILDVLI 163
             L FF W ++Q GV +    F  +   L  S L   A  V+  ++    +   ILD ++
Sbjct: 86  RLLDFFYWSQSQMGVPQFLDSFSILAVQLCNSELFGLANGVLTQMIRTPYSSSSILDSVL 145

Query: 164 G-----GGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL 218
                 GG S  V     D+L+  Y +  M+++   VF     + +L  +  CN +    
Sbjct: 146 FWFRNYGGSSPVV----FDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSL---- 197

Query: 219 RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNG 278
                        R MGE                                   +G  PN 
Sbjct: 198 -------------RSMGE-----------------------------------KGLVPNT 209

Query: 279 VTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
            TY ++  G  R   + +A+    +M K GLK   ++ + +I G+  +G + E L +++ 
Sbjct: 210 YTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDV 269

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
           MV+ G+   L TYN+LI+GLCK+G++  A      M+     P+  ++  L+ GYCR  N
Sbjct: 270 MVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHN 329

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           +G A  L DE+  RNLVP+ V+Y  +I+GLC   DL +A +L E M   G+ P+V+ Y+ 
Sbjct: 330 MGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYST 389

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           ++ G    G +  AR   + M   G+ PD F Y   I+   K G   EA     E+  +G
Sbjct: 390 LIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRG 449

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
             PD +T+   + G  K G + EA +   +M+  G +P++  YT +I+   + G+L    
Sbjct: 450 LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEAL 509

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
            +F ++   G+ P + T +  IH     GR++ A   FSE++ KG+ P+V TY++LI+G 
Sbjct: 510 SIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGF 569

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
           C+   +++A+ L  +M  +GI PN + Y  L++  C +G+ Q A +L+  M ++ +EPD 
Sbjct: 570 CKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDS 629

Query: 699 CTHSALL 705
            T+S ++
Sbjct: 630 VTYSTMI 636



 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 171/529 (32%), Positives = 266/529 (50%), Gaps = 1/529 (0%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           ++ +   L++ Y  +  +E+   + + M  +G+ PD+   N II  L   G   +A    
Sbjct: 383 NVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYL 442

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             +   G+KP  VT+   +  + K G+M EA +   EM   G  PN   Y VLI G  + 
Sbjct: 443 LEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKA 502

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G L +A  + R +  LG+     + +  I G  + G + EAL +  E+  +G+ P + TY
Sbjct: 503 GNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTY 562

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           + LI G CK G V  A     EM  K + P+I  YN L+ G C+SG+I  A  LFD +  
Sbjct: 563 SSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPE 622

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           + L P  VTY+T+IDG C+  ++  A  L   M ++G+ P    Y  +V+G CK G++  
Sbjct: 623 KGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEK 682

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A   F EML+KG      ++ T I G  K     EA +L +EM+AK   PD +TY  ++ 
Sbjct: 683 AMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVID 741

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
             CK G +EEAN L ++M     I D +TYTS+++   ++G       LF  M+ KG+ P
Sbjct: 742 WHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKP 801

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
             VTY ++I+AH     L  AF    E+  KG+      ++ LI  LC+   + +A  L 
Sbjct: 802 DEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLL 861

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
            +M E G+ P+    + L+     AG   EA R+++ +    + PD  T
Sbjct: 862 DEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTT 910



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 138/413 (33%), Positives = 232/413 (56%), Gaps = 1/413 (0%)

Query: 191 QCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTML 250
           + L +F  +   G+LPDV+ C+  I  L  NG   +A +V+  + E G+ P + TY++++
Sbjct: 507 EALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLI 566

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
             FCK+GE+++A EL  EM  +G +PN   YN L+ G  ++G++++AR L   M + GL+
Sbjct: 567 SGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLE 626

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
             + +Y+ +I GY +   + EA +L  EM ++GV P    YN L++G CK G +  A + 
Sbjct: 627 PDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNL 686

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
           F EML+K      +S+NTL+ GYC+S  I EA  LF E+ ++ ++P  VTY T+ID  C+
Sbjct: 687 FREMLQKG-FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCK 745

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
            G +E A  L + M  + ++ D +TYT ++ G  K+G  S     F +M+ KG++PD   
Sbjct: 746 AGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVT 805

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           Y   I    K  +  EA++L++E++ KG       +++L+  LCK   L EA++LL +M 
Sbjct: 806 YGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMG 865

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
             G  P     ++++ +  E G +     +F  +   GL P   T   L++ +
Sbjct: 866 ELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGN 918



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 100/341 (29%), Positives = 175/341 (51%), Gaps = 17/341 (4%)

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
           + ++ L+  Y R G + EA  +F   ++ +++ +++  N+L                  +
Sbjct: 157 VVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSL-----------------RS 199

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           M  +G++P+  TYTI+  G C+   ++ A+  F EM + GL+PD  A +  I G ++ GD
Sbjct: 200 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 259

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
             E  R+++ M++ G P +LITYNVL+HGLCK G +E+A E+L+ M+  G  P+  T+  
Sbjct: 260 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 319

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           +I       ++ R  +L + M ++ L P+ V+Y  +I+       L LA     +M   G
Sbjct: 320 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 379

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
           ++PNV+ Y+ LI G     RI++A  L   M   G+ P+ + Y  +I+    AG  +EA 
Sbjct: 380 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 439

Query: 684 RLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
               E+  R ++PD  T  A +L          A +Y + +
Sbjct: 440 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEM 480


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 197/677 (29%), Positives = 329/677 (48%), Gaps = 65/677 (9%)

Query: 90  PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVET 149
           P +   +L ++     +  +F+ W    PG K   F F   L +L++SG    A  +  +
Sbjct: 77  PSVAAAILAQLDGNAELGTQFYDWAAALPGFKHTIFSFNKYLNLLVKSGSPAKAIDLFRS 136

Query: 150 VV---CVNMHGILDVLI------GGGLSSCVS-----------IKILDLLLLIYTKKSMV 189
            +   C   H     L+      GG +   +            +   +++L    +    
Sbjct: 137 RLPPRCRPNHFTYSTLLRATYKAGGDVERTLGFFRRIRSSSRSVADYNIVLQSLCRAGET 196

Query: 190 EQCLLVF-NKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
            + L +F  +M R+G+ P +   N II  L  +       E++  + E G  P +VTYNT
Sbjct: 197 ARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNT 256

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL- 307
           ++DS CK G+++EA  L  +M  R C PN VTY+VLI G  + G +++AR LI++M +  
Sbjct: 257 LIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKS 316

Query: 308 ------------------------------------GLKVSAH--SYNPIICGYSEKGLL 329
                                                L+VS    +++ +I G  + G +
Sbjct: 317 CDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQI 376

Query: 330 VEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTL 389
            EA ++ ++M+  G  P + TYN L+ GLCK  ++  A      M+ K V PD+I+Y+ L
Sbjct: 377 DEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVL 436

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM-INQG 448
           +  +C++  + EA  L   + SR   P VVT+N++IDGLC+      A Q+ ++M +  G
Sbjct: 437 VDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHG 496

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
           ++PD ITY  +++G  + G    A    + M      PD +A+   I G  KLGD S A 
Sbjct: 497 LVPDKITYCTLIDGLFRTGRAGQAEALLDAM----PDPDTYAFNCCINGLSKLGDVSRAL 552

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
           ++   ML     PD +T+N+L+ G CK G+ E+A+ L  +MV     PD +T+ ++I   
Sbjct: 553 QVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGL 612

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
            + G +   RD+ + M   G+ P +VTY  L+H     GR+E A  +  EM   G  P+ 
Sbjct: 613 CKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDS 672

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
           ITY +L+  LCR  R D A  L  +++  G  P+  TY IL++    +G  ++A+ + +E
Sbjct: 673 ITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEE 732

Query: 689 MLDREIEPDYCTHSALL 705
           M+ +   PD  T++ L+
Sbjct: 733 MVGKGHHPDVVTYNTLI 749



 Score =  319 bits (817), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 207/673 (30%), Positives = 332/673 (49%), Gaps = 36/673 (5%)

Query: 87  VSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWV 146
           V+D  ++++ L R  E  R AL  FR    + GV      + TI+  L +S  L +   +
Sbjct: 180 VADYNIVLQSLCRAGETAR-ALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMEL 238

Query: 147 VETVV-------CVNMHGILDVLIGGG-------------LSSCV-SIKILDLLLLIYTK 185
            E +V        V  + ++D L   G               SCV ++    +L+    K
Sbjct: 239 FEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCK 298

Query: 186 KSMVEQCLLVFNKMLRNG--LLPDVKNCNRIIKVLRDNGFSVKAREVYRMM--GEFGIKP 241
              +++   +  +M R    +LP++   N  +  L     + +A E+ R +  G   + P
Sbjct: 299 VGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSP 358

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
             VT++T++D  CK G++ EA  +  +M   G  PN +TYN L+ G  +  ++E+A  +I
Sbjct: 359 DTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMI 418

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
             M+  G+     +Y+ ++  + +   + EAL L   M +RG  P + T+N +I GLCK 
Sbjct: 419 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKS 478

Query: 362 GRVSDARHRFFEM-LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            R  +A   F +M L+  ++PD I+Y TL+ G  R+G  G+A  L D +      P    
Sbjct: 479 DRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPD----PDTYA 534

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           +N  I+GL + GD+  A Q+   M+   ++PD +T+ I++ G+CK GN   A   F EM+
Sbjct: 535 FNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMV 594

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            K LQPD   +   I G  K G    A  + + M   G PP+++TYN LVHGLCK G +E
Sbjct: 595 AKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIE 654

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA + L +MV  G +PD ITY S+++A            L + +   G  P  VTY +L+
Sbjct: 655 EACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILV 714

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME---EE 657
                 G+ E A     EM  KG  P+V+TYN LI+ LC+   +++A  L  DM      
Sbjct: 715 DGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSR 774

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDR--EIEPDYCTHSALLLKQLDKDYKV 715
             +PN  TY++LIN  C  G   EA  L +EM+ +  ++ P+  T+++ L     +    
Sbjct: 775 CCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMA 834

Query: 716 HAVEYLESLTLGA 728
            A E + SL  G+
Sbjct: 835 EACELMRSLRDGS 847



 Score =  318 bits (814), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 190/584 (32%), Positives = 299/584 (51%), Gaps = 47/584 (8%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   +++   VF+ M+  G +P+V   N ++  L       +A  +   M + G+ P ++
Sbjct: 372 KCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVI 431

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY+ ++D+FCK   + EALELL  M  RGC+PN VT+N +I G  ++    +A  +  DM
Sbjct: 432 TYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDM 491

Query: 305 -LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
            LK GL     +Y  +I G    G   +A  L + M      P    +N  I GL K G 
Sbjct: 492 ALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPD----PDTYAFNCCINGLSKLGD 547

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           VS A   +  ML   ++PD +++N L+ G C++GN  +A  LF+E+ ++NL P V+T+  
Sbjct: 548 VSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGA 607

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           LIDGLC+ G +E A+ + + M N G+ P+V+TY  +V+G CK G +  A +F  EM+  G
Sbjct: 608 LIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSG 667

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
             PD   Y + +    +   T +A +L  E+ + G+ PD +TYN+LV GL K G  E+A 
Sbjct: 668 CVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAI 727

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM---LRKGLSPTLVTYTVLI 600
            +L +MVG G  PD +TY ++I +  + GDL   R L  +M   + +   P +VTY+VLI
Sbjct: 728 TVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLI 787

Query: 601 HAHAARGRLELAFMYFSEMQVKG--IRPNVITYNA------------------------- 633
           +     GR++ A     EM  K   + PN+ITYN+                         
Sbjct: 788 NGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGS 847

Query: 634 ------------LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
                       LI+GLC+  + D+A  +F DM   G +PN  TY +L+N  C     + 
Sbjct: 848 LRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMER 907

Query: 682 ALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
           A  + + M+D+ + PD  T+S L+       +   A+E L  + 
Sbjct: 908 AHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMA 951



 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 179/574 (31%), Positives = 287/574 (50%), Gaps = 77/574 (13%)

Query: 206  PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
            PD    N  I  L   G   +A +VY  M E  + P  VT+N ++   CK G  ++A  L
Sbjct: 530  PDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASAL 589

Query: 266  LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
              EM  +   P+ +T+  LI G  + G++E AR ++  M  LG+  +  +YN ++ G  +
Sbjct: 590  FEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCK 649

Query: 326  KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
             G + EA    EEMV+ G  P   TY  L+Y LC+  R  DA     E+      PD ++
Sbjct: 650  SGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVT 709

Query: 386  YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM- 444
            YN L+ G  +SG   +A  + +E+  +   P VVTYNTLID LC+ GDLE A++L  +M 
Sbjct: 710  YNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMS 769

Query: 445  --INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG------------------- 483
              +++  +P+V+TY++++NG CK+G +  ARE   EM+RK                    
Sbjct: 770  SRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCK 829

Query: 484  --------------------LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
                                + PD   ++T I G  K G T EA  + ++M+A G+ P++
Sbjct: 830  QSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNV 889

Query: 524  ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
            +TYNVL++GLCK   +E A+ ++  MV  G  PD ITY+ ++ A  +   +    +L + 
Sbjct: 890  VTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHG 949

Query: 584  MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK-GIRPNVITY----------- 631
            M  +G +P +VT+  +I       +   AF  F +M +K G+ P+ ITY           
Sbjct: 950  MASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTG 1009

Query: 632  --------------------NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
                                N  INGL +L  + +A    +++E   ++P+K T+ ILI 
Sbjct: 1010 WAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLELE---LVPDKVTFNILIA 1066

Query: 672  ENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
              C AGN+++A  L++EM+ + ++PD  T  AL+
Sbjct: 1067 GACKAGNFEQASALFEEMVAKNLQPDVMTFGALI 1100



 Score =  279 bits (713), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 185/641 (28%), Positives = 300/641 (46%), Gaps = 104/641 (16%)

Query: 107  ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETV---------VCVNMHG 157
            A + F  +  + G+  D+  +CT+++ L  +G    A  +++ +          C+N   
Sbjct: 484  AFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLS 543

Query: 158  ILDVLIGGGLSSCVSI--KILDL-----------LLLIYTKKSMVEQCLLVFNKMLRNGL 204
             L     G +S  + +  ++L+L           L+    K    EQ   +F +M+   L
Sbjct: 544  KL-----GDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNL 598

Query: 205  LPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALE 264
             PDV     +I  L   G    AR++  +MG  G+ P++VTYN ++   CK G ++EA +
Sbjct: 599  QPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQ 658

Query: 265  LLWEMQGRGC-----------------------------------SPNGVTYNVLITGFS 289
             L EM   GC                                    P+ VTYN+L+ G  
Sbjct: 659  FLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLW 718

Query: 290  RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM---VTRGVAP 346
            ++G+ EQA  ++ +M+  G      +YN +I    + G L EA  L  +M   V+R   P
Sbjct: 719  KSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVP 778

Query: 347  TLATYNILIYGLCKWGRVSDARHRFFEMLRK--NVIPDIISYNTLLYGYCRSGNIGEAFL 404
             + TY++LI GLCK GR+ +AR    EM+RK  +V+P+II+YN+ L G C+   + EA  
Sbjct: 779  NVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACE 838

Query: 405  LFDELRSRNL--VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
            L   LR  +L   P  VT++TLIDGLC+ G  + A  + ++MI  G +P+V+TY +++NG
Sbjct: 839  LMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNG 898

Query: 463  SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
             CK   +  A      M+ KG+ PD   Y+  +    K     EA  L   M ++G  P+
Sbjct: 899  LCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPN 958

Query: 523  LITYNVLVHGLCKLGSLEEANELLRKM-VGDGFIPDHITYTSIIHASL------------ 569
            ++T+N ++ GLCK     EA ++   M +  G  PD ITY ++I                
Sbjct: 959  VVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLL 1018

Query: 570  -------------------EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
                               ++GD+ R     + ML   L P  VT+ +LI      G  E
Sbjct: 1019 DAMPDPDTYAFNCCINGLSKLGDVSRA---LHRMLELELVPDKVTFNILIAGACKAGNFE 1075

Query: 611  LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
             A   F EM  K ++P+V+T+ ALI+GLC+  +++  + + 
Sbjct: 1076 QASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWDIM 1116


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  320 bits (819), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 176/549 (32%), Positives = 299/549 (54%), Gaps = 5/549 (0%)

Query: 173 IKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR 232
           + + DLL+  Y +   + +    F  + + G    +  CN ++  +   G+   A +VY 
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
              + G   ++ T N M+++ CK+G++      L EM+ +G   + VTYN L+  + R G
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
            + +A GL+  M   GLK    +YN +I G  ++G    A  + +EM+  G+ P  AT+N
Sbjct: 274 LVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFN 333

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
            ++   C+   V +A   F EML++ V+PD+IS+++++  + R+G +G A   F++++  
Sbjct: 334 PMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGV 393

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
            LVP  V Y  LI+G CR  D+  A +++  M+ +G + DV+TY  ++NG C+   L  A
Sbjct: 394 GLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDA 453

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
            E F EM+ +G+ PD +  TT I G  K G+ ++A  L E M  +   PD++TYN L+ G
Sbjct: 454 DELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDG 513

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
            CK+G +E+A EL   M+     P +I+++ +I+    +G +     L++ M  KG+ PT
Sbjct: 514 FCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPT 573

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
           LVT   +I  +   G L  A  + + M  +G+ P+ ITYN LIN   +    D+A+ L  
Sbjct: 574 LVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLIN 633

Query: 653 DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
           +MEE G+LPN  TY  ++      G  QEA  +  +M+D+ I PD  T+++L+   + KD
Sbjct: 634 NMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKD 693

Query: 713 -----YKVH 716
                ++VH
Sbjct: 694 NMKEAFRVH 702



 Score =  317 bits (812), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 175/528 (33%), Positives = 290/528 (54%)

Query: 170 CVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE 229
           CVSI   + LL    K   V+    V+   +++G + +V   N ++  L  +G       
Sbjct: 186 CVSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGV 245

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
               M E G+   +VTYNT+++++C+ G + EA  L+  M G+G  P   TYN LI G  
Sbjct: 246 YLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLC 305

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           + G  E+A+ ++ +ML +GL  +A ++NP++     K  + EA  +  EM+ RGV P L 
Sbjct: 306 KEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLI 365

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           +++ ++    + G +  A   F +M    ++PD + Y  L+ GYCR+ ++  A  + +E+
Sbjct: 366 SFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEM 425

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
             R  V  VVTYNTL++GLCR   L+ A +L + M+ +G+ PD  T T +++G CK GN+
Sbjct: 426 VERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNM 485

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
           + A   F  M  + L+PD   Y T + G  K+G+  +A  L  +M+++   P  I++++L
Sbjct: 486 TKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSIL 545

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           ++G C LG + EA  L  +M   G  P  +T  +II   L  G+L +  D  N M+ +G+
Sbjct: 546 INGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGV 605

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
            P  +TY  LI++       + AF   + M+ +G+ PN++TYNA++ G  R  R+ +A  
Sbjct: 606 PPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEM 665

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           +   M ++GI P+K TYT LIN   +  N +EA R++ EML R   PD
Sbjct: 666 VLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPD 713



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 133/446 (29%), Positives = 240/446 (53%)

Query: 279 VTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
           V +++LI  + +  +L +     + + K G  VS ++ N ++    + G +  A  + E+
Sbjct: 155 VVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYED 214

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
            V  G    + T NI++  LCK G++ +      EM  K V  D+++YNTL+  YCR G 
Sbjct: 215 FVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGL 274

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           + EAF L D +  + L P + TYN LI+GLC+ G  E A+++ + M+  G+ P+  T+  
Sbjct: 275 VSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNP 334

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           M+  SC+  ++  A   FNEML++G+ PD  ++++ +    + G+   A    E+M   G
Sbjct: 335 MLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVG 394

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
             PD + Y +L++G C+   +  A ++  +MV  G + D +TY ++++       L    
Sbjct: 395 LVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDAD 454

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           +LF  M+ +G+ P   T T LIH +   G +  A   F  M ++ ++P+V+TYN L++G 
Sbjct: 455 ELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGF 514

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
           C++  +++A  L+ DM    I P+  +++ILIN  C+ G   EA RL+ EM ++ I+P  
Sbjct: 515 CKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTL 574

Query: 699 CTHSALLLKQLDKDYKVHAVEYLESL 724
            T + ++   L       A ++L ++
Sbjct: 575 VTCNTIIKGYLRAGNLSKANDFLNTM 600



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 131/400 (32%), Positives = 220/400 (55%), Gaps = 2/400 (0%)

Query: 158 ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
           +LD ++G GL  C +    + +L+   +K  V +   VFN+ML+ G++PD+ + + I+ V
Sbjct: 316 VLDEMLGVGL--CPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGV 373

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
              NG   +A   +  M   G+ P  V Y  +++ +C+  ++  AL++  EM  RGC  +
Sbjct: 374 FSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMD 433

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
            VTYN L+ G  R   L+ A  L ++M++ G+    ++   +I GY + G + +AL+L E
Sbjct: 434 VVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFE 493

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
            M  R + P + TYN L+ G CK G +  A+  +++M+ + + P  IS++ L+ G+C  G
Sbjct: 494 TMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLG 553

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
            + EAF L+DE++ + + PT+VT NT+I G  R G+L  A      MI++G+ PD ITY 
Sbjct: 554 LVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYN 613

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
            ++N   K  N   A    N M  +GL P+   Y   + G  + G   EA  +  +M+ K
Sbjct: 614 TLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDK 673

Query: 518 GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
           G  PD  TY  L++G     +++EA  +  +M+  GF+PD
Sbjct: 674 GINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPD 713


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 181/541 (33%), Positives = 290/541 (53%), Gaps = 13/541 (2%)

Query: 193 LLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDS 252
           L  F  M  +G++ D      ++  L       +A  +   M + G +P++VTYN+++D 
Sbjct: 64  LRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDG 123

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK-----L 307
            CK  E   A EL   M+   CSP+ VTYN L+ G  R G+LE+A  L ++ML      +
Sbjct: 124 LCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDM 183

Query: 308 GLKVSAH--SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
             + S +  +Y+ +I G  +   + +A+ L E M  RG +P + TY IL+ GLCK  +V+
Sbjct: 184 DDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVA 243

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
            A     EML    +P++++YN+LL+G CR+  + +A  L  ++  R   P VVTY TLI
Sbjct: 244 AAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLI 303

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           DGLC+ G ++ A  +  +MI++G  PD++ Y +++NG CK   +  +       +  G++
Sbjct: 304 DGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIK 363

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           PD   Y++ I G  +     EA RL   + ++G PPD+I Y+ L+ GLCK G ++EA +L
Sbjct: 364 PDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDL 423

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
              M GDG   D +TY+++I    + G +     L   M+R G  P+ +TY  LI     
Sbjct: 424 YEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCD 483

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE-----GIL 660
              L+ A     EM+     P+ +TYN LI+G+CR+ R+D A  L    +       G  
Sbjct: 484 LNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTA 543

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
            +   Y+ LI+  C AG   EAL  ++EM+D  + PD+ T+S +LL+ L K   +H + +
Sbjct: 544 LDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYS-ILLEGLKKSKDLHELRH 602

Query: 721 L 721
           L
Sbjct: 603 L 603



 Score =  288 bits (738), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 160/498 (32%), Positives = 264/498 (53%), Gaps = 12/498 (2%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K+  ++Q L + ++M  +G  P+V   N +I  L  N    +A+E++  M      PS+V
Sbjct: 91  KEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMV 150

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRG-------CSPNGVTYNVLITGFSRNGELEQA 297
           TYNT+LD   + G+++ A+ L  EM  R        CSPN +TY+VLI G  +   + QA
Sbjct: 151 TYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQA 210

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L+  M   G      +Y  ++ G  ++  +  A  +  EM+  G  P L TYN L++G
Sbjct: 211 VELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHG 270

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           LC+  RVSDA     +M  +   P++++Y TL+ G C+ G + +A  +  ++  +   P 
Sbjct: 271 LCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPD 330

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           ++ YN LI+GLC+   ++ +  L    ++ GI PDV+TY+ ++ G C+   L  A     
Sbjct: 331 LMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLL 390

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            +  +G  PD   Y+T I G  K G   EA+ L E M   G   D++TY+ L+ GLCK G
Sbjct: 391 YVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAG 450

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            ++EA+ LL +MV  G  P  +TY S+I    ++  L    +L   M R   +P+ VTY 
Sbjct: 451 RVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYN 510

Query: 598 VLIHAHAARGRLELAFMYFSEMQVK-----GIRPNVITYNALINGLCRLRRIDQAYGLFI 652
           +LIH      R++ A +   + + +     G   + I Y++LI+GLC+  R+ +A   F 
Sbjct: 511 ILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQ 570

Query: 653 DMEEEGILPNKYTYTILI 670
           +M + G++P+  TY+IL+
Sbjct: 571 EMIDNGVIPDHITYSILL 588



 Score =  265 bits (676), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 157/492 (31%), Positives = 251/492 (51%), Gaps = 7/492 (1%)

Query: 240 KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
           +P + TY  +L  FC+ GE+ +A     EM+ +   PN    ++LI G  +      A  
Sbjct: 6   QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
             R M   G+      Y  ++ G  ++  L +AL +  EM   G  P + TYN LI GLC
Sbjct: 66  CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL---RSRNL-- 414
           K      A+  F  M      P +++YNTLL G  R+G +  A  LF E+   RS ++  
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185

Query: 415 --VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
              P V+TY+ LIDGLC+   +  A +L E+M  +G  PDVITYTI+V+G CK   ++ A
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAA 245

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
            E   EML  G  P+   Y + + G  +    S+A  L  +M  +G  P+++TY  L+ G
Sbjct: 246 WEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDG 305

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           LCK+G +++A  +L  M+  G  PD + Y  +I+   +   +     L    +  G+ P 
Sbjct: 306 LCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPD 365

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
           +VTY+ +I+      RL+ A      ++ +G  P+VI Y+ LI+GLC+  ++D+A+ L+ 
Sbjct: 366 VVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYE 425

Query: 653 DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
            M  +G   +  TY+ LI+  C AG   EA  L   M+     P   T+++L+    D +
Sbjct: 426 VMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLN 485

Query: 713 YKVHAVEYLESL 724
           +   A+E +E +
Sbjct: 486 HLDEAIELVEEM 497



 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 149/507 (29%), Positives = 259/507 (51%), Gaps = 7/507 (1%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           PDV     +++     G   +A+  +  M    + P++   + ++D  CK     +AL  
Sbjct: 7   PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRC 66

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
              MQG G   + V Y  L++G  +   L+QA  ++ +M   G + +  +YN +I G  +
Sbjct: 67  FRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCK 126

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN------- 378
                 A  L E M +   +P++ TYN L+ GL + G++  A   F EML +        
Sbjct: 127 NNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDR 186

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
             P++I+Y+ L+ G C++  + +A  L + +++R   P V+TY  L+DGLC+   +  A 
Sbjct: 187 CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAW 246

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
           ++   M++ G +P+++TY  +++G C+   +S A     +M  +G  P+   Y T I G 
Sbjct: 247 EVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGL 306

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
            K+G   +A  +  +M+ KG  PDL+ YN+L++GLCK   ++E+  LLR+ V  G  PD 
Sbjct: 307 CKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDV 366

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
           +TY+S+I+       L     L   +  +G  P ++ Y+ LI      G+++ AF  +  
Sbjct: 367 VTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEV 426

Query: 619 MQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGN 678
           M   G   +V+TY+ LI+GLC+  R+D+A+ L   M   G  P+  TY  LI   C+  +
Sbjct: 427 MAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNH 486

Query: 679 WQEALRLYKEMLDREIEPDYCTHSALL 705
             EA+ L +EM      P   T++ L+
Sbjct: 487 LDEAIELVEEMERSNCAPSAVTYNILI 513



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 140/439 (31%), Positives = 229/439 (52%), Gaps = 7/439 (1%)

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
           C P+  TY  L+ GF R GE++QA+    +M    L  +    + +I G  +    ++AL
Sbjct: 5   CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
                M   G+      Y  L+ GL K  R+  A     EM      P++++YN+L+ G 
Sbjct: 65  RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ------ 447
           C++     A  LF+ ++S    P++VTYNTL+DGL R G LE A  L + M+++      
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMD 184

Query: 448 -GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSE 506
               P+VITY+++++G CK   +S A E    M  +G  PD   YT  + G  K    + 
Sbjct: 185 DRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAA 244

Query: 507 AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
           A+ +  EML  G  P+L+TYN L+HGLC+   + +A  L+R M   G  P+ +TY ++I 
Sbjct: 245 AWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLID 304

Query: 567 ASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRP 626
              ++G ++    +  +M+ KG +P L+ Y +LI+      +++ +          GI+P
Sbjct: 305 GLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKP 364

Query: 627 NVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLY 686
           +V+TY+++I GLCR  R+D+A  L + ++  G  P+   Y+ LI+  C AG   EA  LY
Sbjct: 365 DVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLY 424

Query: 687 KEMLDREIEPDYCTHSALL 705
           + M     + D  T+S L+
Sbjct: 425 EVMAGDGCDADVVTYSTLI 443


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 196/606 (32%), Positives = 305/606 (50%), Gaps = 76/606 (12%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK-VLRDNGFSV--KAR 228
           S  +LD+L+  Y K   V+    V   M   GL P ++ CN ++K +LR +  ++  K R
Sbjct: 46  SPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVR 105

Query: 229 EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
           E   M+G  GI P + TY+T+++++CK  E   A ++L EM+ RGC  N VTYNVLI G 
Sbjct: 106 EF--MVGA-GISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGL 162

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPII--------------------C------- 321
            R+G +E+A G  +DM   GL     +Y  +I                    C       
Sbjct: 163 CRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNV 222

Query: 322 --------GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
                   G+  +G   EA  + +EMV  GV P   TY+ L+ GLCK G++  A     +
Sbjct: 223 VVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQ 282

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M+R +  PD I+YN ++ G+ R  N  +AF L  E+ +  + P V TY+ +I GLC+ G+
Sbjct: 283 MVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGE 342

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
            E A  L E M  +G+ P+   Y  +++G C+ GN+S+A E F++M +  + PD + Y +
Sbjct: 343 PEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNS 402

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            I G  K+G   E+ +   +M  +G  P+  TY+ L+HG  K G LE A +L+++M+  G
Sbjct: 403 LIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTG 462

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
             P+ + Y  ++ +  +  D+ +    F +ML +G+      Y +LIH  ++ G +E AF
Sbjct: 463 LKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAF 522

Query: 614 MYFS-----------------------------------EMQVKGIRPNVITYNALINGL 638
              S                                   EM  KG+ PN++ YNALI+GL
Sbjct: 523 RVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGL 582

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
           C+   I  A  +F  +  +G++PN  TYT LI+ +C  G+   A  LY EML   I PD 
Sbjct: 583 CKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDA 642

Query: 699 CTHSAL 704
             +S L
Sbjct: 643 FVYSVL 648



 Score =  275 bits (703), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 156/516 (30%), Positives = 269/516 (52%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           ++L+    +   VE+       M   GL+PD      +I  L  +  S +A+ +   M  
Sbjct: 156 NVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSC 215

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
             +KP++V Y  ++D F +EG   EA +++ EM   G  PN +TY+ L+ G  + G++++
Sbjct: 216 AELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDR 275

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  L++ M++   +    +YN II G+       +A  L  EM   G++P + TY+I+I+
Sbjct: 276 ASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIH 335

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           GLC+ G    A     EM  K + P+   Y  L+ GYCR GN+  A  +FD++   N++P
Sbjct: 336 GLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLP 395

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
            +  YN+LI GL + G +E + +    M  +G+LP+  TY+ +++G  K G+L  A +  
Sbjct: 396 DLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLV 455

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
             ML  GL+P+   Y   +    K  D  +     + ML +G   D   Y +L+H L   
Sbjct: 456 QRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSS 515

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G++E A  +L ++  +G +PD   Y+S+I    +  D  +   + + M +KG+ P +V Y
Sbjct: 516 GNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCY 575

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
             LI      G +  A   F+ +  KG+ PN +TY +LI+G C++  I  A+ L+ +M  
Sbjct: 576 NALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLA 635

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
            GI P+ + Y++L     +AG+ ++A+ L +EM  R
Sbjct: 636 TGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLR 671



 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 148/529 (27%), Positives = 277/529 (52%), Gaps = 1/529 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + ++   ++   +  +M+  G+ P+    + +++ L   G   +A  + + M     +P 
Sbjct: 232 FMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPD 291

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            +TYN +++   +    ++A  LL EM+  G SPN  TY+++I G  ++GE E+A  L+ 
Sbjct: 292 TITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLE 351

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M   GLK +A  Y P+I GY  +G +  A  + ++M    V P L  YN LI+GL K G
Sbjct: 352 EMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVG 411

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           RV ++   F +M  + ++P+  +Y+ L++GY ++G++  A  L   +    L P  V Y 
Sbjct: 412 RVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYI 471

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            L++   +  D+E      ++M++QG++ D   Y I+++     GN+  A    +E+ + 
Sbjct: 472 DLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKN 531

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G  PD   Y++ I+G  K  D  +A+ + +EM  KG  P+++ YN L+ GLCK G +  A
Sbjct: 532 GSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYA 591

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             +   ++  G +P+ +TYTS+I  S ++GD+     L+N ML  G++P    Y+VL   
Sbjct: 592 RNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTG 651

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
            ++ G LE A     EM ++G   ++ ++N L++G C+  ++ +   L   +   G++PN
Sbjct: 652 CSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPN 710

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDK 711
             T   +I+    AG   E   ++ E+  +  E      S+L +  +++
Sbjct: 711 ALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQ 759



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 134/429 (31%), Positives = 214/429 (49%), Gaps = 43/429 (10%)

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE----MLRKN 378
           Y + G + +A  +   M  RG+AP++   N L+  L +    +DA    ++    M+   
Sbjct: 57  YKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLR----ADAMALLWKVREFMVGAG 112

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
           + PD+ +Y+TL+  YC+      A  +  E+R R      VTYN LI GLCR G +E A 
Sbjct: 113 ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAF 172

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
             K++M + G++PD  TY  ++NG CK    + A+   +EM    L+P+   Y   I G 
Sbjct: 173 GFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGF 232

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
           ++ G+  EA+++ +EM+A G  P+ ITY+ LV GLCK+G ++ A+ LL++MV D   PD 
Sbjct: 233 MREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDT 292

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
           ITY  II       + +    L + M   G+SP + TY+++IH     G  E A     E
Sbjct: 293 ITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEE 352

Query: 619 MQVKGIRPNVITYNALINGLCR-----------------------------------LRR 643
           M  KG++PN   Y  LI+G CR                                   + R
Sbjct: 353 MTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGR 412

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSA 703
           ++++   F  M+E G+LPN++TY+ LI+     G+ + A +L + MLD  ++P+   +  
Sbjct: 413 VEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYID 472

Query: 704 LLLKQLDKD 712
           LL      D
Sbjct: 473 LLESYFKSD 481



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 122/438 (27%), Positives = 210/438 (47%), Gaps = 24/438 (5%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+   +K   VE+    F +M   GLLP+    + +I     NG    A ++ + M + G
Sbjct: 403 LIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTG 462

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           +KP+ V Y  +L+S+ K  ++++       M  +G   +   Y +LI   S +G +E A 
Sbjct: 463 LKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAF 522

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            ++ ++ K G     H Y+ +I G  +     +A  + +EM  +GV P +  YN LI GL
Sbjct: 523 RVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGL 582

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           CK G +S AR+ F  +L K ++P+ ++Y +L+ G C+ G+I  AF L++E+ +  + P  
Sbjct: 583 CKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDA 642

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
             Y+ L  G    GDLE A  L E M  +G    + ++  +V+G CK G +    +  + 
Sbjct: 643 FVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHV 701

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAY----RLQE---------------EMLAKG- 518
           ++ +GL P+       I+G  + G  SE +     LQ+               +M+ +G 
Sbjct: 702 IMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGK 761

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
            P D++   +  H  CK G+L++A  L   +V         +Y +I+      G L    
Sbjct: 762 IPLDVVDDMIRDH--CKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEAL 819

Query: 579 DLFNNMLRKG-LSPTLVT 595
           +L   M ++G L PTLV 
Sbjct: 820 NLLKEMDKRGNLQPTLVA 837



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 161/362 (44%), Gaps = 46/362 (12%)

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           +SD+ HR   +L           + L+  Y +SG + +A  +   +R R L P++   N 
Sbjct: 39  LSDSGHRSPAVL-----------DVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNA 87

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           L+  L R   + +  +++E M+  GI                                  
Sbjct: 88  LLKDLLRADAMALLWKVREFMVGAGI---------------------------------- 113

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
             PD + Y+T I    K+ +   A ++  EM  +G   + +TYNVL+ GLC+ G++EEA 
Sbjct: 114 -SPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAF 172

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
              + M   G +PD  TY ++I+   +       + L + M    L P +V Y  LI   
Sbjct: 173 GFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGF 232

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
              G  + AF    EM   G++PN ITY+ L+ GLC++ ++D+A  L   M  +   P+ 
Sbjct: 233 MREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDT 292

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLES 723
            TY ++I  +    N ++A RL  EM +  I P+  T+S ++           A + LE 
Sbjct: 293 ITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEE 352

Query: 724 LT 725
           +T
Sbjct: 353 MT 354


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  319 bits (817), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 171/511 (33%), Positives = 283/511 (55%), Gaps = 1/511 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +  KM  +GL P+V   + +I      G   +AR +   M   G+ P I  YN ++    
Sbjct: 460 LLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLS 519

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K G+M+EA   L E+QGRG  P+ VT+   I G+S+ G++ +A     +ML  GL  +  
Sbjct: 520 KAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNP 579

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
            Y  +I G+ + G L+EAL++   +   GV P + T +  I+GL K GRV +A   F E+
Sbjct: 580 LYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL 639

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
             K ++PD+ +Y++L+ G+C+ G + +AF L DE+  + + P +  YN L+DGLC+ GD+
Sbjct: 640 KEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDI 699

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A++L + M  +G+ PD +TY+ M++G CK  N++ A   F+EM  KG+QP  F Y   
Sbjct: 700 QRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNAL 759

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           + G  K GD  +A  L  EML KGF   L ++N L+ G CK   ++EA++L ++M+    
Sbjct: 760 VHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQI 818

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
           +PDH+TYT++I    + G +     LF  M  + L    VTYT L++ +   G+    F 
Sbjct: 819 MPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFA 878

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F +M  KG++P+ +TY  +I   C+   + +A+ L  ++  +G+L     + +LI   C
Sbjct: 879 LFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALC 938

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
              +  EA +L  EM +  ++P     + L+
Sbjct: 939 KREDLTEASKLLDEMGELGLKPSLAACNTLV 969



 Score =  312 bits (799), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 199/678 (29%), Positives = 338/678 (49%), Gaps = 52/678 (7%)

Query: 75  NNRW----VSDHFQAVVSDPELLVRVLNRIR-EKPRIALRFFRWVETQPGVKRDEFVFCT 129
            N W    VS H  + + +P+++  VL++ +   P+  L FF W ++Q GV +    F  
Sbjct: 53  QNNWKTIMVSSHIPSKL-NPDVIRAVLHQNQVGDPKRLLDFFYWSQSQMGVPQFLDSFSI 111

Query: 130 ILEILIESGLLRSAYWVVETVVCV--NMHGILDVLIG-----GGLSSCVSIKILDLLLLI 182
           +   L  S L   A  V+  ++    +   ILD ++      GG S  V     D+L+  
Sbjct: 112 LAVQLCNSELFGLANGVLTQMIRTPYSSSSILDSVLFWFRNYGGSSPVV----FDILIDS 167

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL------------------RDNGFS 224
           Y +  M+++   VF     + +L  +  CN ++K L                     GF 
Sbjct: 168 YKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGMLDAKMGFD 227

Query: 225 V-----------------KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLW 267
           V                  A+ V   M E G+ P+   Y+ +++  C+ G++ EA+EL  
Sbjct: 228 VYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKR 287

Query: 268 EMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKG 327
            M  +G  PN  TY ++  G  R   + +A+    +M K GLK   ++ + +I G+  +G
Sbjct: 288 SMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREG 347

Query: 328 LLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYN 387
            + E L +++ MV+ G+   L TYN+LI+GLCK+G++  A      M+     P+  ++ 
Sbjct: 348 DIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFC 407

Query: 388 TLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
            L+ GYCR  N+G A  L DE+  RNLVP+ V+Y  +I+GLC   DL +A +L E M   
Sbjct: 408 LLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFS 467

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
           G+ P+V+ Y+I++      G +  AR   + M   G+ PD F Y   I+   K G   EA
Sbjct: 468 GLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 527

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
                E+  +G  PD +T+   + G  K G + EA +   +M+  G +P++  YT +I+ 
Sbjct: 528 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 587

Query: 568 SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
             + G+L     +F  +   G+ P + T +  IH     GR++ A   FSE++ KG+ P+
Sbjct: 588 HFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 647

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYK 687
           V TY++LI+G C+   +++A+ L  +M  +GI PN + Y  L++  C +G+ Q A +L+ 
Sbjct: 648 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 707

Query: 688 EMLDREIEPDYCTHSALL 705
            M ++ +EPD  T+S ++
Sbjct: 708 GMPEKGLEPDSVTYSTMI 725



 Score =  300 bits (769), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 169/547 (30%), Positives = 295/547 (53%), Gaps = 1/547 (0%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           LL+  Y ++  + + L + ++M +  L+P   +   +I  L        A ++   M   
Sbjct: 408 LLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFS 467

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G+KP++V Y+ ++ ++  EG ++EA  LL  M   G +P+   YN +I+  S+ G++E+A
Sbjct: 468 GLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 527

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
              + ++   GLK  A ++   I GYS+ G + EA    +EM+  G+ P    Y +LI G
Sbjct: 528 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 587

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
             K G + +A   F  +    V+PD+ + +  ++G  ++G + EA  +F EL+ + LVP 
Sbjct: 588 HFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 647

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           V TY++LI G C+ G++E A +L + M  +GI P++  Y  +V+G CK G++  AR+ F+
Sbjct: 648 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 707

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            M  KGL+PD   Y+T I G  K  + +EA+ L  EM +KG  P    YN LVHG CK G
Sbjct: 708 GMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEG 767

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            +E+A  L R+M+  GF    +++ ++I    +   ++    LF  M+ K + P  VTYT
Sbjct: 768 DMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYT 826

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
            +I  H   G++E A + F EMQ + +  + +TY +L+ G  +L +  + + LF  M  +
Sbjct: 827 TVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAK 886

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHA 717
           G+ P++ TY ++I  +C   N  EA +L  E++ + +      H  L+     ++    A
Sbjct: 887 GVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEA 946

Query: 718 VEYLESL 724
            + L+ +
Sbjct: 947 SKLLDEM 953



 Score =  299 bits (765), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 171/523 (32%), Positives = 281/523 (53%), Gaps = 1/523 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + ++  +++ L + + M+  G+  ++   N +I  L   G   KA E+ + M   G KP+
Sbjct: 343 FMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPN 402

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             T+  +++ +C+E  M  ALELL EM+ R   P+ V+Y  +I G     +L  A  L+ 
Sbjct: 403 SRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLE 462

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M   GLK +   Y+ +I  Y+ +G + EA  L + M   GVAP +  YN +I  L K G
Sbjct: 463 KMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAG 522

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           ++ +A     E+  + + PD +++   + GY ++G + EA   FDE+    L+P    Y 
Sbjct: 523 KMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYT 582

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            LI+G  + G+L  A  +   +   G+LPDV T +  ++G  K G +  A + F+E+  K
Sbjct: 583 VLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEK 642

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           GL PD F Y++ I+G  K G+  +A+ L +EM  KG  P++  YN LV GLCK G ++ A
Sbjct: 643 GLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRA 702

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            +L   M   G  PD +TY+++I    +  ++     LF+ M  KG+ P    Y  L+H 
Sbjct: 703 RKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHG 762

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
               G +E A   F EM  KG     +++N LI+G C+  +I +A  LF +M  + I+P+
Sbjct: 763 CCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPD 821

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             TYT +I+ +C AG  +EA  L+KEM +R +  D  T+++L+
Sbjct: 822 HVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLM 864



 Score =  296 bits (758), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 169/512 (33%), Positives = 270/512 (52%), Gaps = 1/512 (0%)

Query: 194 LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
           L F +M + GL PD   C+ +I      G   +   +  +M   GI  +++TYN ++   
Sbjct: 319 LTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGL 378

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           CK G+M++A E+L  M   GC PN  T+ +LI G+ R   + +A  L+ +M K  L  SA
Sbjct: 379 CKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSA 438

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
            SY  +I G      L  A  L E+M   G+ P +  Y+ILI      GR+ +AR     
Sbjct: 439 VSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDG 498

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M    V PDI  YN ++    ++G + EA     E++ R L P  VT+   I G  + G 
Sbjct: 499 MSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGK 558

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           +  A +  + M++ G++P+   YT+++NG  K GNL  A   F  +   G+ PD    + 
Sbjct: 559 MTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSA 618

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            I G LK G   EA ++  E+  KG  PD+ TY+ L+ G CK G +E+A EL  +M   G
Sbjct: 619 FIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKG 678

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
             P+   Y +++    + GD++R R LF+ M  KGL P  VTY+ +I  +     +  AF
Sbjct: 679 IAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAF 738

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
             F EM  KG++P+   YNAL++G C+   +++A  LF +M ++G      ++  LI+  
Sbjct: 739 SLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG-FATTLSFNTLIDGY 797

Query: 674 CNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           C +   QEA +L++EM+ ++I PD+ T++ ++
Sbjct: 798 CKSCKIQEASQLFQEMIAKQIMPDHVTYTTVI 829



 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 171/529 (32%), Positives = 266/529 (50%), Gaps = 1/529 (0%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           ++ +  +L++ Y  +  +E+   + + M  +G+ PD+   N II  L   G   +A    
Sbjct: 472 NVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYL 531

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             +   G+KP  VT+   +  + K G+M EA +   EM   G  PN   Y VLI G  + 
Sbjct: 532 LEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKA 591

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G L +A  + R +  LG+     + +  I G  + G + EAL +  E+  +G+ P + TY
Sbjct: 592 GNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTY 651

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           + LI G CK G V  A     EM  K + P+I  YN L+ G C+SG+I  A  LFD +  
Sbjct: 652 SSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPE 711

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           + L P  VTY+T+IDG C+  ++  A  L   M ++G+ P    Y  +V+G CK G++  
Sbjct: 712 KGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEK 771

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A   F EML+KG      ++ T I G  K     EA +L +EM+AK   PD +TY  ++ 
Sbjct: 772 AMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVID 830

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
             CK G +EEAN L ++M     I D +TYTS+++   ++G       LF  M+ KG+ P
Sbjct: 831 WHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKP 890

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
             VTY ++I+AH     L  AF    E+  KG+      ++ LI  LC+   + +A  L 
Sbjct: 891 DEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLL 950

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
            +M E G+ P+      L+     AG   EA R+++ +    + PD  T
Sbjct: 951 DEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTT 999



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 148/463 (31%), Positives = 248/463 (53%), Gaps = 9/463 (1%)

Query: 179  LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS----VKAREVYRMM 234
             +L Y+K   + +    F++ML +GL+P+    N +  VL +  F     ++A  ++R +
Sbjct: 549  FILGYSKTGKMTEAAKYFDEMLDHGLMPN----NPLYTVLINGHFKAGNLMEALSIFRRL 604

Query: 235  GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
               G+ P + T +  +    K G +QEAL++  E++ +G  P+  TY+ LI+GF + GE+
Sbjct: 605  HALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEV 664

Query: 295  EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
            E+A  L  +M   G+  +   YN ++ G  + G +  A  L + M  +G+ P   TY+ +
Sbjct: 665  EKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTM 724

Query: 355  IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
            I G CK   V++A   F EM  K V P    YN L++G C+ G++ +A  LF E+  +  
Sbjct: 725  IDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF 784

Query: 415  VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
              T +++NTLIDG C+   ++ A QL + MI + I+PD +TYT +++  CK G +  A  
Sbjct: 785  A-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANL 843

Query: 475  FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
             F EM  + L  D   YT+ + G  KLG +SE + L E+M+AKG  PD +TY ++++  C
Sbjct: 844  LFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHC 903

Query: 535  KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
            K  +L EA +L  ++VG G +     +  +I A  +  DL     L + M   GL P+L 
Sbjct: 904  KEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLA 963

Query: 595  TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
                L+ +    G+++ A   F  ++  G+ P+  T   L+NG
Sbjct: 964  ACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 1006



 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 138/413 (33%), Positives = 232/413 (56%), Gaps = 1/413 (0%)

Query: 191  QCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTML 250
            + L +F ++   G+LPDV+ C+  I  L  NG   +A +V+  + E G+ P + TY++++
Sbjct: 596  EALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLI 655

Query: 251  DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
              FCK+GE+++A EL  EM  +G +PN   YN L+ G  ++G++++AR L   M + GL+
Sbjct: 656  SGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLE 715

Query: 311  VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
              + +Y+ +I GY +   + EA +L  EM ++GV P    YN L++G CK G +  A + 
Sbjct: 716  PDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNL 775

Query: 371  FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
            F EML+K      +S+NTL+ GYC+S  I EA  LF E+ ++ ++P  VTY T+ID  C+
Sbjct: 776  FREMLQKG-FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCK 834

Query: 431  YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
             G +E A  L + M  + ++ D +TYT ++ G  K+G  S     F +M+ KG++PD   
Sbjct: 835  AGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVT 894

Query: 491  YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
            Y   I    K  +  EA++L++E++ KG       +++L+  LCK   L EA++LL +M 
Sbjct: 895  YGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMG 954

Query: 551  GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
              G  P      +++ +  E G +     +F  +   GL P   T   L++ +
Sbjct: 955  ELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGN 1007



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/409 (30%), Positives = 212/409 (51%)

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           ++ +I  Y   G+L EA N+        +  +L   N L+  L K G +      +  ML
Sbjct: 161 FDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGML 220

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
              +  D+ +Y  L+   C++G++  A  +  E+  + L P    Y+ +I+G+C+ GD++
Sbjct: 221 DAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDID 280

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            A +LK +M  +G++P+  TYTI+  G C+   ++ A+  F EM + GL+PD  A +  I
Sbjct: 281 EAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALI 340

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
            G ++ GD  E  R+++ M++ G P +LITYNVL+HGLCK G +E+A E+L+ MV  G  
Sbjct: 341 DGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCK 400

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           P+  T+  +I       ++ R  +L + M ++ L P+ V+Y  +I+       L LA   
Sbjct: 401 PNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKL 460

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
             +M   G++PNV+ Y+ LI       RI++A  L   M   G+ P+ + Y  +I+    
Sbjct: 461 LEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSK 520

Query: 676 AGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           AG  +EA     E+  R ++PD  T  A +L          A +Y + +
Sbjct: 521 AGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEM 569



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 167/323 (51%)

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
           + ++ L+  Y R G + EA  +F   ++ +++ +++  N+L+  L + G +E+  ++   
Sbjct: 159 VVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNG 218

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           M++  +  DV TYT +V   CK G+L  A+    EM  KGL P+ F Y+  I G  ++GD
Sbjct: 219 MLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGD 278

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
             EA  L+  M  KG  P+  TY ++  GLC+   + EA     +M   G  PD+   ++
Sbjct: 279 IDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSA 338

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           +I   +  GD+     + + M+  G+   L+TY VLIH     G++E A      M   G
Sbjct: 339 LIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLG 398

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
            +PN  T+  LI G CR   + +A  L  +ME+  ++P+  +Y  +IN  C+  +   A 
Sbjct: 399 CKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLAN 458

Query: 684 RLYKEMLDREIEPDYCTHSALLL 706
           +L ++M    ++P+   +S L++
Sbjct: 459 KLLEKMTFSGLKPNVVVYSILIM 481


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  318 bits (816), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 188/611 (30%), Positives = 323/611 (52%), Gaps = 15/611 (2%)

Query: 90  PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVET 149
           P+ +  V+ R +  P  AL+ F  V+T+ G K     +    + +IE   L   +  +E 
Sbjct: 7   PKHVAAVI-RYQNDPLNALKMFNQVKTEDGFKHTLETY----KCMIEKLGLHGKFEAMED 61

Query: 150 VVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVK 209
           V+      +   ++ G     V I I+      Y +K  V++ + VF +M      P V+
Sbjct: 62  VLAEMRKNVDSKMLEG-----VYIGIMR----DYGRKGKVQEAVNVFERMDFYDCEPSVQ 112

Query: 210 NCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM 269
           + N I+ +L + G+  +A +VY  M + GI P + T+   + SFC  G    AL LL  M
Sbjct: 113 SYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNM 172

Query: 270 QGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLL 329
            G+GC  N V+Y  +I+GF +     +A  L  +MLK G+     ++N +I    +KG +
Sbjct: 173 PGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNV 232

Query: 330 VEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTL 389
            E+  L  +++ RGV P L T+NI I GLC+ G + +A      ++ + + PD+ISYNTL
Sbjct: 233 QESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTL 292

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
           + G+C+   + EA     ++ +  + P   TYNT+I+G C+ G ++ A ++  + + +G 
Sbjct: 293 ICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGF 352

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
           +PD  TY+ ++NG C  G+++ A   F E + KG +     Y T + G  K G   +A +
Sbjct: 353 IPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQ 412

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           L ++M+  G  PD+ TYN++V+GLCK+G L +AN +L   +  G IPD  T+ ++I    
Sbjct: 413 LMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYC 472

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
           +  ++ +  ++ + ML  G++P ++TY  L++      +L+     F  M  KG  PN+I
Sbjct: 473 KQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNII 532

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           TYN LI   C+ R++ +A  LF +M+  G+ P+  T   LI   C+ G   +A  L+   
Sbjct: 533 TYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFV-T 591

Query: 690 LDREIEPDYCT 700
           +++E +  Y T
Sbjct: 592 IEKEYKFSYST 602



 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 168/509 (33%), Positives = 271/509 (53%), Gaps = 8/509 (1%)

Query: 215 IKVLRDNGFSVKARE---VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
           I ++RD G   K +E   V+  M  +  +PS+ +YN +++   + G   +A ++   M+ 
Sbjct: 80  IGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKD 139

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
            G  P+  T+ + +  F   G    A  L+ +M   G + +A SY  +I G+ ++   +E
Sbjct: 140 IGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIE 199

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
           A +L +EM+ +G+ P + T+N LI+ LCK G V ++   F +++++ V P++ ++N  + 
Sbjct: 200 AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQ 259

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
           G CR G I EA  L + + S  L P V++YNTLI G C++  L  A+     M+N G+ P
Sbjct: 260 GLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEP 319

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           +  TY  ++NG CK G +  A +   + + KG  PD F Y++ I G    GD + A  + 
Sbjct: 320 NEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVF 379

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
            E + KGF   +I YN LV GL K G + +A +L++ M+  G  PD  TY  +++   +M
Sbjct: 380 YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKM 439

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
           G L     + N+ + KG  P + T+  LI  +  +  ++ A      M   GI P+VITY
Sbjct: 440 GCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITY 499

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           N L+NGLC+ R++D     F  M E+G  PN  TY ILI   C      EA+ L+KEM  
Sbjct: 500 NTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKT 559

Query: 692 REIEPDYCTHSALLL-----KQLDKDYKV 715
           R + PD  T   L+       +LDK Y++
Sbjct: 560 RGLTPDIVTLCTLICGLCSNGELDKAYEL 588



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 162/564 (28%), Positives = 278/564 (49%), Gaps = 18/564 (3%)

Query: 100 IREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGIL 159
           I  +P  ALR    +  Q G + +   +C ++    +      AY             + 
Sbjct: 158 ITGRPTAALRLLNNMPGQ-GCEFNAVSYCAVISGFYKENCQIEAYH------------LF 204

Query: 160 DVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL- 218
           D ++  G+  C  I   + L+ +  KK  V++   +F+K+++ G+ P++   N  I+ L 
Sbjct: 205 DEMLKQGI--CPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLC 262

Query: 219 RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNG 278
           R       AR +  ++ E G+ P +++YNT++  FCK  ++ EA   L +M   G  PN 
Sbjct: 263 RKGAIDEAARLLESIVSE-GLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNE 321

Query: 279 VTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
            TYN +I GF + G ++ A  ++RD +  G      +Y+ +I G    G +  A+ +  E
Sbjct: 322 FTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYE 381

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
            + +G   ++  YN L+ GL K G V  A     +M+     PDI +YN ++ G C+ G 
Sbjct: 382 AMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGC 441

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           + +A  + ++  ++  +P + T+NTLIDG C+  +++ A ++ + M++ GI PDVITY  
Sbjct: 442 LSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNT 501

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           ++NG CK   L    + F  ML KG  P+   Y   I    K    SEA  L +EM  +G
Sbjct: 502 LLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRG 561

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD-GFIPDHITYTSIIHASLEMGDLRRG 577
             PD++T   L+ GLC  G L++A EL   +  +  F      +  +I+A  E  ++   
Sbjct: 562 LTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMA 621

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
             LF+ M     +P   TY V+I ++   G ++LA  +  E   KG+ P+  T   ++N 
Sbjct: 622 EKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNC 681

Query: 638 LCRLRRIDQAYGLFIDMEEEGILP 661
           LC   R+ +A  +   M + GI+P
Sbjct: 682 LCVTHRLSEAVVIINLMVQNGIVP 705



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/378 (30%), Positives = 199/378 (52%), Gaps = 1/378 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K  M++    +    +  G +PD    + +I  L ++G   +A  V+    E G K S
Sbjct: 331 FCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHS 390

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           I+ YNT++    K+G + +AL+L+ +M   GCSP+  TYN+++ G  + G L  A G++ 
Sbjct: 391 IILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILN 450

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           D +  G      ++N +I GY ++  + +A+ + + M++ G+ P + TYN L+ GLCK  
Sbjct: 451 DAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKAR 510

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           ++ +    F  ML K   P+II+YN L+  +C+   + EA  LF E+++R L P +VT  
Sbjct: 511 KLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLC 570

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILP-DVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           TLI GLC  G+L+ A +L   +  +         + IM+N  C+  N+SMA + F++M  
Sbjct: 571 TLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGG 630

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
               PD + Y   I    K G+   A+    E ++KG  P   T   +++ LC    L E
Sbjct: 631 SDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSE 690

Query: 542 ANELLRKMVGDGFIPDHI 559
           A  ++  MV +G +P+ +
Sbjct: 691 AVVIINLMVQNGIVPEEV 708



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 129/272 (47%), Gaps = 52/272 (19%)

Query: 154 NMHGILDVLIGGGLSSCV-SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCN 212
           + +GIL+  I  G   C+  I   + L+  Y K+  +++ + + + ML +G+ PDV   N
Sbjct: 444 DANGILNDAIAKG---CIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYN 500

Query: 213 RIIKVLRDNGFSVKAR------EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELL 266
            ++     NG   KAR      + ++ M E G  P+I+TYN +++SFCK+ ++ EA+EL 
Sbjct: 501 TLL-----NGL-CKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELF 554

Query: 267 WEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK----------LGLKVSA--- 313
            EM+ RG +P+ VT   LI G   NGEL++A  L   + K            + ++A   
Sbjct: 555 KEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCE 614

Query: 314 -----------------------HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
                                  ++Y  +I  Y + G +  A     E +++G+ P+  T
Sbjct: 615 KLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTT 674

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
              ++  LC   R+S+A      M++  ++P+
Sbjct: 675 CGKVLNCLCVTHRLSEAVVIINLMVQNGIVPE 706



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 92/188 (48%)

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G ++EA  +  +M      P   +Y +I++  +E G   +   ++  M   G+ P + T+
Sbjct: 90  GKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTH 149

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
           T+ + +    GR   A    + M  +G   N ++Y A+I+G  +     +AY LF +M +
Sbjct: 150 TIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLK 209

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVH 716
           +GI P+  T+  LI+  C  GN QE+ +L+ +++ R + P+  T +  +     K     
Sbjct: 210 QGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDE 269

Query: 717 AVEYLESL 724
           A   LES+
Sbjct: 270 AARLLESI 277



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 3/156 (1%)

Query: 552 DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV--TYTVLIHAHAARGRL 609
           DGF     TY  +I      G      D+   M RK +   ++   Y  ++  +  +G++
Sbjct: 34  DGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEM-RKNVDSKMLEGVYIGIMRDYGRKGKV 92

Query: 610 ELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL 669
           + A   F  M      P+V +YNA++N L       QA+ +++ M++ GI P+ YT+TI 
Sbjct: 93  QEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIR 152

Query: 670 INENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +   C  G    ALRL   M  +  E +  ++ A++
Sbjct: 153 MKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVI 188


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  318 bits (816), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 165/494 (33%), Positives = 285/494 (57%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           ++N+M+R+G  PDV + N +I  L ++G +  A  V++ M + G KP++VTYNT++DS C
Sbjct: 185 LYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLC 244

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K+  + +A++ L EM GRG  P+ +TYN ++ G    G+L +A  L + M + G K    
Sbjct: 245 KDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVV 304

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +YN II    +  L+ +A +   EMV +G+ P + TY  +++GLC  G++++A   F +M
Sbjct: 305 TYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKM 364

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
            +K   PD+++YNT++   C+   + +A     E+  R + P  VTY+T++ G C  G L
Sbjct: 365 EQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQL 424

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A QL + M+ + ++P+ +T++I+V+G C+ G +S AR  F  M  KG++P+ + Y   
Sbjct: 425 DEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNAL 484

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           + G       +EA ++ E M+ KG  PDL +YN+L++G C    +++A  LL +M     
Sbjct: 485 MNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKL 544

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            P+ +TY +I+     +G L   ++LF  M   G+ PTL+TY++L++     G L+ A  
Sbjct: 545 TPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALK 604

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F  M+ K + P++I Y  LI G+    +++ A GLF  +  +GI P   TY ++I    
Sbjct: 605 LFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLL 664

Query: 675 NAGNWQEALRLYKE 688
             G   EA  L+++
Sbjct: 665 KEGLSDEAYELFRK 678



 Score =  301 bits (771), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 157/479 (32%), Positives = 270/479 (56%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A  V+  M + GI+P ++T+ T+++  C EG+++ A+EL  EM   G  P+ ++YN LI 
Sbjct: 147 AVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLIN 206

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G   +G    A  + + M + G K +  +YN II    +  L+ +A++   EMV RG+ P
Sbjct: 207 GLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPP 266

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
              TYN +++GLC  G++++A   F  M +    PD+++YN ++    +   + +A    
Sbjct: 267 DAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFL 326

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
            E+  + + P VVTY T++ GLC  G L  A +L + M  +G  PDV+ Y  +++  CK 
Sbjct: 327 SEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKD 386

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
             ++ A EF +EM+ +G+ P+   Y+T + G   LG   EA +L +EM+ +   P+ +T+
Sbjct: 387 RLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTF 446

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           ++LV GLC+ G + EA  +   M   G  P+  TY ++++       +   R +F  M+ 
Sbjct: 447 SILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVG 506

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
           KG +P L +Y +LI+ +    R++ A    ++M VK + PN +TYN ++ GLC + R+  
Sbjct: 507 KGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLD 566

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           A  LF  M   G+LP   TY+IL+N  C  G+  EAL+L+K M ++++EPD   ++ L+
Sbjct: 567 AQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILI 625



 Score =  293 bits (749), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 167/530 (31%), Positives = 280/530 (52%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
           L++L+    + + V+  + V+ KM + G+ PDV     +I  + + G    A E+Y  M 
Sbjct: 131 LNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMV 190

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
             G +P +++YNT+++  C  G    A+ +  +M+  GC PN VTYN +I    ++  + 
Sbjct: 191 RSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVN 250

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
            A   + +M+  G+   A +YN I+ G    G L EA  L + M   G  P + TYNI+I
Sbjct: 251 DAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIII 310

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
             L K   V+DA     EM+ + + PD+++Y T+L+G C  G + EA  LF ++  +   
Sbjct: 311 DSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCK 370

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P VV YNT+ID LC+   +  A +    M+++GI P+ +TY+ +++G C +G L  A + 
Sbjct: 371 PDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQL 430

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
           F EM+ + + P+   ++  + G  + G  SEA  + E M  KG  P++ TYN L++G C 
Sbjct: 431 FKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCL 490

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
              + EA ++   MVG G  PD  +Y  +I+       + + + L   M  K L+P  VT
Sbjct: 491 RCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVT 550

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           Y  ++      GRL  A   F +M   G+ P ++TY+ L+NGLC+   +D+A  LF  M+
Sbjct: 551 YNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMK 610

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           E+ + P+   YTILI      G  + A  L+ ++    I+P   T++ ++
Sbjct: 611 EKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMI 660



 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 151/475 (31%), Positives = 252/475 (53%), Gaps = 1/475 (0%)

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
           YRM      +PSIV +   L S  K  +    + L  +M   G +    + N+LI    R
Sbjct: 82  YRM-ARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCR 140

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
              ++ A  +   M KLG++    ++  +I G   +G +  A+ L  EMV  G  P + +
Sbjct: 141 LNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVIS 200

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           YN LI GLC  G  + A H F +M +    P++++YNT++   C+   + +A     E+ 
Sbjct: 201 YNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMV 260

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
            R + P  +TYN+++ GLC  G L  A +L + M   G  PDV+TY I+++   K   ++
Sbjct: 261 GRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVN 320

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            A +F +EM+ +G+ PD   YTT + G   LG  +EA RL ++M  KG  PD++ YN ++
Sbjct: 321 DAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTII 380

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
             LCK   + +A E L +MV  G  P+ +TY++I+H    +G L     LF  M+ + + 
Sbjct: 381 DSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVM 440

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           P  +T+++L+      G +  A   F  M  KG+ PN+ TYNAL+NG C   ++++A  +
Sbjct: 441 PNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKV 500

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           F  M  +G  P+ ++Y ILIN  CN+    +A  L  +M  +++ P+  T++ ++
Sbjct: 501 FEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIM 555



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 121/353 (34%), Positives = 188/353 (53%), Gaps = 5/353 (1%)

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           V DA   F+ M R N  P I+ +   L    +         L +++    +  TV + N 
Sbjct: 74  VDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNI 133

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           LI+ LCR   ++ A  +   M   GI PDVIT+T ++NG C  G + +A E +NEM+R G
Sbjct: 134 LINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSG 193

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
            +PD  +Y T I G    G+T+ A  + ++M   G  P+++TYN ++  LCK   + +A 
Sbjct: 194 HEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAM 253

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
           + L +MVG G  PD ITY SI+H    +G L     LF  M + G  P +VTY ++I + 
Sbjct: 254 DFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSL 313

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
                +  A  + SEM  +GI P+V+TY  +++GLC L ++++A  LF  ME++G  P+ 
Sbjct: 314 YKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDV 373

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL-----LKQLDK 711
             Y  +I+  C      +A+    EM+DR I P+  T+S +L     L QLD+
Sbjct: 374 VAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDE 426



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 168/328 (51%), Gaps = 2/328 (0%)

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
           ++ +A   F  +   N  P++V +   +  + +         L   M   G+   V +  
Sbjct: 73  SVDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLN 132

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
           I++N  C++ ++  A   + +M + G+QPD   +TT I G    G    A  L  EM+  
Sbjct: 133 ILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRS 192

Query: 518 GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
           G  PD+I+YN L++GLC  G+   A  + +KM  +G  P+ +TY +II +  +   +   
Sbjct: 193 GHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDA 252

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
            D  + M+ +G+ P  +TY  ++H     G+L  A   F  M+  G +P+V+TYN +I+ 
Sbjct: 253 MDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDS 312

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           L + R ++ A     +M ++GI P+  TYT +++  C  G   EA+RL+K+M  +  +PD
Sbjct: 313 LYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPD 372

Query: 698 YCTHSALLLKQLDKDYKVH-AVEYLESL 724
              ++  ++  L KD  V+ A+E+L  +
Sbjct: 373 VVAYNT-IIDSLCKDRLVNDAMEFLSEM 399



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 123/263 (46%), Gaps = 16/263 (6%)

Query: 120 VKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLL 179
           V  +   F  +++ L + G++  A WV ET            +   G+    +I   + L
Sbjct: 439 VMPNTLTFSILVDGLCQEGMVSEARWVFET------------MTEKGVEP--NIYTYNAL 484

Query: 180 LLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGI 239
           +  Y  +  + +   VF  M+  G  PD+ + N +I    ++    KA+ +   M    +
Sbjct: 485 MNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKL 544

Query: 240 KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
            P+ VTYNT++   C  G + +A EL  +M   G  P  +TY++L+ G  ++G L++A  
Sbjct: 545 TPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALK 604

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
           L + M +  L+     Y  +I G    G L  A  L  ++   G+ P   TYN++I GL 
Sbjct: 605 LFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLL 664

Query: 360 KWGRVSDARHRF--FEMLRKNVI 380
           K G   +A   F  ++M++ NVI
Sbjct: 665 KEGLSDEAYELFRKWKMMKHNVI 687


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  318 bits (815), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 212/684 (30%), Positives = 330/684 (48%), Gaps = 92/684 (13%)

Query: 104 PRIALRFFRWVETQ--PGVKR-DEFV-----FCTILEILIESGLLRSA--YWVVETVVCV 153
           P++ L FF W   Q  P     D F       C      + +GLL      +    VV  
Sbjct: 101 PKLLLDFFYWSSPQLAPSAPAPDAFAHLAMSLCAGSLFNLANGLLIKMIRAYPSPPVVLA 160

Query: 154 NMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNR 213
           ++H  L        S   S  +LD+L+  Y K   V+    V   M   G+ P ++ CN 
Sbjct: 161 SIHRALSD------SGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNA 214

Query: 214 IIK-VLRDNGFSV--KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQ 270
           ++K +LR +  ++  K RE   M+G  GI P + TY+T+++++CK  E   A ++L EM+
Sbjct: 215 LLKDLLRADAMALLWKVREF--MVGA-GISPDVYTYSTLIEAYCKVREFDTAKKVLVEMR 271

Query: 271 GRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII---------- 320
            RGC  N VTYNVLI G  R+G +E+A G  +DM   GL     +Y  +I          
Sbjct: 272 ERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSN 331

Query: 321 ----------C---------------GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
                     C               G+  +G   EA  + +EMV  GV P   TY+ L+
Sbjct: 332 EAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLV 391

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
            GLCK G++  A     +M+R +  PD I+YN ++ G+ R  +  +AF L  E+ +  + 
Sbjct: 392 RGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGIS 451

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P V TY+ +I GLC+ G+ E A  L E M  +G+ P+   Y  +++G C+ GN+S+A E 
Sbjct: 452 PNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEI 511

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
           F++M +  + PD + Y + I G  K+G   E+ +   +M  +G  P+  TY+ L+HG  K
Sbjct: 512 FDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLK 571

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
            G LE A +L+++M+  G  P+ + Y  ++ +  +  D+ +    F +ML +G+      
Sbjct: 572 NGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRI 631

Query: 596 YTVLIHAHAARGRLELAFMYFS-----------------------------------EMQ 620
           Y +LIH  ++ G +E AF   S                                   EM 
Sbjct: 632 YGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMS 691

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
            KG+ PN++ YNALI+GLC+   I  A  +F  +  +G++PN  TYT LI+ +C  G+  
Sbjct: 692 KKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDIS 751

Query: 681 EALRLYKEMLDREIEPDYCTHSAL 704
            A  LY EML   I PD   +S L
Sbjct: 752 NAFYLYNEMLATGITPDAFVYSVL 775



 Score =  275 bits (703), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 156/516 (30%), Positives = 268/516 (51%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           ++L+    +   VE+       M   GL+PD      +I  L  +  S +A+ +   M  
Sbjct: 283 NVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSC 342

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
             +KP++V Y  ++D F +EG   EA +++ EM   G  PN +TY+ L+ G  + G++++
Sbjct: 343 AELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDR 402

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  L++ M++   +    +YN II G+       +A  L  EM   G++P + TY+I+I+
Sbjct: 403 ASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIH 462

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           GLC+ G    A     EM  K + P+   Y  L+ GYCR GN+  A  +FD++   N++P
Sbjct: 463 GLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLP 522

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
            +  YN+LI GL + G +E + +    M  +G+LP+  TY+ +++G  K G+L  A +  
Sbjct: 523 DLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLV 582

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
             ML  GL+P+   Y   +    K  D  +     + ML +G   D   Y +L+H L   
Sbjct: 583 QRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSS 642

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G++E A  +L  +  +G +PD   Y+S+I    +  D  +   + + M +KG+ P +V Y
Sbjct: 643 GNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCY 702

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
             LI      G +  A   F+ +  KG+ PN +TY +LI+G C++  I  A+ L+ +M  
Sbjct: 703 NALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLA 762

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
            GI P+ + Y++L     +AG+ ++A+ L +EM  R
Sbjct: 763 TGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLR 798



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 147/529 (27%), Positives = 276/529 (52%), Gaps = 1/529 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + ++   ++   +  +M+  G+ P+    + +++ L   G   +A  + + M     +P 
Sbjct: 359 FMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPD 418

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            +TYN +++   +    ++A  LL EM+  G SPN  TY+++I G  ++GE E+A  L+ 
Sbjct: 419 TITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLE 478

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M   GLK +A  Y P+I GY  +G +  A  + ++M    V P L  YN LI+GL K G
Sbjct: 479 EMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVG 538

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           RV ++   F +M  + ++P+  +Y+ L++GY ++G++  A  L   +    L P  V Y 
Sbjct: 539 RVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYI 598

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            L++   +  D+E      ++M++QG++ D   Y I+++     GN+  A    + + + 
Sbjct: 599 DLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKN 658

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G  PD   Y++ I+G  K  D  +A+ + +EM  KG  P+++ YN L+ GLCK G +  A
Sbjct: 659 GSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYA 718

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             +   ++  G +P+ +TYTS+I  S ++GD+     L+N ML  G++P    Y+VL   
Sbjct: 719 RNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTG 778

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
            ++ G LE A     EM ++G   ++ ++N L++G C+  ++ +   L   +   G++PN
Sbjct: 779 CSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPN 837

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDK 711
             T   +I+    AG   E   ++ E+  +  E      S+L +  +++
Sbjct: 838 ALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQ 886



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 141/492 (28%), Positives = 238/492 (48%), Gaps = 56/492 (11%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           E+   +  +M   GL P+      +I      G    A E++  M +  + P +  YN++
Sbjct: 471 EKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSL 530

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           +    K G ++E+ +   +MQ RG  PN  TY+ LI G+ +NG+LE A  L++ ML  GL
Sbjct: 531 IFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGL 590

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
           K +   Y  ++  Y +   + +  +  + M+ +GV      Y ILI+ L   G + +A  
Sbjct: 591 KPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNM-EAAF 649

Query: 370 RFFEMLRKN-VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
           R    + KN  +PD+  Y++L+ G C++ +  +AF + DE+  + + P +V YN LIDGL
Sbjct: 650 RVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGL 709

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ GD+  A+ +  +++ +G++P+ +TYT +++GSCK+G++S A   +NEML  G+ PD 
Sbjct: 710 CKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDA 769

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
           F Y+    G    GD  +A  L EEM  +G    + ++N LV G CK G ++E  +LL  
Sbjct: 770 FVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA-SISSFNNLVDGFCKRGKMQETLKLLHV 828

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDL-------------------RRGRDLFNNMLRKGL 589
           ++G G +P+ +T  +II    E G L                   R    LF +M+ +G 
Sbjct: 829 IMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGK 888

Query: 590 SPTLV----------------------------------TYTVLIHAHAARGRLELAFMY 615
            P  V                                  +Y  ++     +G+L  A   
Sbjct: 889 IPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNL 948

Query: 616 FSEMQVKGIRPN 627
             EM  +GI P+
Sbjct: 949 LKEMDKRGICPS 960



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 207/434 (47%), Gaps = 23/434 (5%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+   +K   VE+    F +M   GLLP+    + +I     NG    A ++ + M + G
Sbjct: 530 LIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTG 589

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           +KP+ V Y  +L+S+ K  ++++       M  +G   +   Y +LI   S +G +E A 
Sbjct: 590 LKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAF 649

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            ++  + K G     H Y+ +I G  +     +A  + +EM  +GV P +  YN LI GL
Sbjct: 650 RVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGL 709

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           CK G +S AR+ F  +L K ++P+ ++Y +L+ G C+ G+I  AF L++E+ +  + P  
Sbjct: 710 CKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDA 769

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
             Y+ L  G    GDLE A  L E M  +G    + ++  +V+G CK G +    +  + 
Sbjct: 770 FVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHV 828

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAY----RLQE---------------EMLAKG- 518
           ++ +GL P+       I+G  + G  SE +     LQ+               +M+ +G 
Sbjct: 829 IMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGK 888

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
            P D++   +  H  CK G+L++A  L   +V         +Y +I+      G L    
Sbjct: 889 IPLDVVDDMIRDH--CKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEAL 946

Query: 579 DLFNNMLRKGLSPT 592
           +L   M ++G+ P+
Sbjct: 947 NLLKEMDKRGICPS 960



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 126/463 (27%), Positives = 207/463 (44%), Gaps = 40/463 (8%)

Query: 109 RFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLS 168
           ++F  ++ + G+  +EF +  ++   +++G L SA  +V+             ++  GL 
Sbjct: 545 KYFAQMQER-GLLPNEFTYSGLIHGYLKNGDLESAEQLVQR------------MLDTGLK 591

Query: 169 SCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR 228
               I I   LL  Y K   +E+    F  ML  G++ D +    +I  L  +G    A 
Sbjct: 592 PNDVIYID--LLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAF 649

Query: 229 EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
            V   + + G  P +  Y++++   CK  + ++A  +L EM  +G  PN V YN LI G 
Sbjct: 650 RVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGL 709

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
            ++G++  AR +   +L  GL  +  +Y  +I G  + G +  A  L  EM+  G+ P  
Sbjct: 710 CKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDA 769

Query: 349 ATYNILIYGLCKWGRVSDARHRFFEM-LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFD 407
             Y++L  G    G +  A     EM LR +    I S+N L+ G+C+ G + E   L  
Sbjct: 770 FVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA--SISSFNNLVDGFCKRGKMQETLKLLH 827

Query: 408 ELRSRNLVPTVVTYNTLIDGLCRYGDL--------EVAQQLKE-----------NMINQG 448
            +  R LVP  +T   +I GL   G L        E+ Q+  E           +MINQG
Sbjct: 828 VIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQG 887

Query: 449 ILP-DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
            +P DV+    M+   CK GNL  A    + ++ K       +Y   +    + G  SEA
Sbjct: 888 KIPLDVVDD--MIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEA 945

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
             L +EM  +G  P      +L+  L   G ++E N +L  M+
Sbjct: 946 LNLLKEMDKRGICPSENQCLILLTNLHTSGYIQEHNTVLDNML 988



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 157/328 (47%), Gaps = 43/328 (13%)

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM---A 472
           P V+  + L+D   + G ++ A ++   M ++G+ P +     ++    +   +++    
Sbjct: 174 PAVL--DVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKV 231

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
           REF   M+  G+ PD + Y+T I    K+ +   A ++  EM  +G   + +TYNVL+ G
Sbjct: 232 REF---MVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAG 288

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           LC+ G++EEA    + M   G +PD  TY ++I+   +       + L + M    L P 
Sbjct: 289 LCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPN 348

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA----- 647
           +V Y  LI      G  + AF    EM   G++PN ITY+ L+ GLC++ ++D+A     
Sbjct: 349 VVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLK 408

Query: 648 -------------YGLFI-----------------DMEEEGILPNKYTYTILINENCNAG 677
                        Y L I                 +ME  GI PN YTY+I+I+  C +G
Sbjct: 409 QMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSG 468

Query: 678 NWQEALRLYKEMLDREIEPDYCTHSALL 705
             ++A  L +EM  + ++P+   ++ L+
Sbjct: 469 EPEKASDLLEEMTTKGLKPNAFVYAPLI 496



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 105/390 (26%), Positives = 184/390 (47%), Gaps = 38/390 (9%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           GV  D  ++  ++  L  SG + +A+ V+  +     +G           S   + +   
Sbjct: 624 GVMLDNRIYGILIHNLSSSGNMEAAFRVLSGI---EKNG-----------SVPDVHVYSS 669

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+    K +  E+   + ++M + G+ P++   N +I  L  +G    AR V+  +   G
Sbjct: 670 LISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKG 729

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           + P+ VTY +++D  CK G++  A  L  EM   G +P+   Y+VL TG S  G+LEQA 
Sbjct: 730 LVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAM 789

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            LI +M   G   S  S+N ++ G+ ++G + E L L   ++ RG+ P   T   +I GL
Sbjct: 790 FLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGL 848

Query: 359 CKWGRVSD----------------ARH---RFFEMLRKNVIP-DIISYNTLLYGYCRSGN 398
            + G++S+                ARH    F +M+ +  IP D++  + ++  +C+ GN
Sbjct: 849 SEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVV--DDMIRDHCKEGN 906

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           + +A +L D + +++      +Y  ++D LCR G L  A  L + M  +GI P      I
Sbjct: 907 LDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQCLI 966

Query: 459 MVNGSCKMGNLSMAREFFNEML-RKGLQPD 487
           ++      G +       + ML  K LQ D
Sbjct: 967 LLTNLHTSGYIQEHNTVLDNMLCHKWLQKD 996


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  318 bits (814), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 188/611 (30%), Positives = 323/611 (52%), Gaps = 15/611 (2%)

Query: 90  PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVET 149
           P+ +  V+ R +  P  AL+ F  V+T+ G K     +    + +IE   L   +  +E 
Sbjct: 7   PKHVAAVI-RYQNDPLNALKMFNQVKTEDGFKHTLETY----KCMIEKLGLHGKFEAMED 61

Query: 150 VVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVK 209
           V+      +   ++ G     V I I+      Y +K  V++ + VF +M      P V+
Sbjct: 62  VLAEMRKNVDSKMLEG-----VYIGIMR----DYGRKGKVQEAVNVFERMDFYDCEPSVQ 112

Query: 210 NCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM 269
           + N I+ +L + G+  +A +VY  M + GI P + T+   + SFC  G    AL LL  M
Sbjct: 113 SYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNM 172

Query: 270 QGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLL 329
            G+GC  N V+Y  +I+GF +     +A  L  +MLK G+     ++N +I    +KG +
Sbjct: 173 PGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNV 232

Query: 330 VEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTL 389
            E+  L  +++ RGV P L T+NI I GLC+ G + +A      ++ + + PD+ISYNTL
Sbjct: 233 QESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTL 292

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
           + G+C+   + EA     ++ +  + P   TYNT+I+G C+ G ++ A ++  + + +G 
Sbjct: 293 ICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGF 352

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
           +PD  TY+ ++NG C  G+++ A   F E + KG +     Y T + G  K G   +A +
Sbjct: 353 IPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQ 412

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           L ++M+  G  PD+ TYN++V+GLCK+G L +AN +L   +  G IPD  T+ ++I    
Sbjct: 413 LMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYC 472

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
           +  ++ +  ++ + ML  G++P ++TY  L++      +L+     F  M  KG  PN+I
Sbjct: 473 KQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNII 532

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           TYN LI   C+ R++ +A  LF +M+  G+ P+  T   LI   C+ G   +A  L+   
Sbjct: 533 TYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFV-T 591

Query: 690 LDREIEPDYCT 700
           +++E +  Y T
Sbjct: 592 IEKEYKFSYST 602



 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 168/509 (33%), Positives = 271/509 (53%), Gaps = 8/509 (1%)

Query: 215 IKVLRDNGFSVKARE---VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
           I ++RD G   K +E   V+  M  +  +PS+ +YN +++   + G   +A ++   M+ 
Sbjct: 80  IGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKD 139

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
            G  P+  T+ + +  F   G    A  L+ +M   G + +A SY  +I G+ ++   +E
Sbjct: 140 IGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIE 199

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
           A +L +EM+ +G+ P + T+N LI+ LCK G V ++   F +++++ V P++ ++N  + 
Sbjct: 200 AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQ 259

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
           G CR G I EA  L + + S  L P V++YNTLI G C++  L  A+     M+N G+ P
Sbjct: 260 GLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEP 319

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           +  TY  ++NG CK G +  A +   + + KG  PD F Y++ I G    GD + A  + 
Sbjct: 320 NEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVF 379

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
            E + KGF   +I YN LV GL K G + +A +L++ M+  G  PD  TY  +++   +M
Sbjct: 380 YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKM 439

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
           G L     + N+ + KG  P + T+  LI  +  +  ++ A      M   GI P+VITY
Sbjct: 440 GCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITY 499

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           N L+NGLC+ R++D     F  M E+G  PN  TY ILI   C      EA+ L+KEM  
Sbjct: 500 NTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKT 559

Query: 692 REIEPDYCTHSALLL-----KQLDKDYKV 715
           R + PD  T   L+       +LDK Y++
Sbjct: 560 RGLTPDIVTLCTLICGLCSNGELDKAYEL 588



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 161/564 (28%), Positives = 277/564 (49%), Gaps = 18/564 (3%)

Query: 100 IREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGIL 159
           I  +P  ALR    +  Q G + +   +C ++    +      AY             + 
Sbjct: 158 ITGRPTAALRLLNNMPGQ-GCEFNAVSYCAVISGFYKENCQIEAYH------------LF 204

Query: 160 DVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL- 218
           D ++  G+  C  I   + L+ +  KK  V++   +F+K+++ G+ P++   N  I+ L 
Sbjct: 205 DEMLKQGI--CPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLC 262

Query: 219 RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNG 278
           R       AR +  ++ E G+ P +++YNT++  FCK  ++ EA   L +M   G  PN 
Sbjct: 263 RKGAIDEAARLLESIVSE-GLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNE 321

Query: 279 VTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
            TYN +I GF + G ++ A  ++RD +  G      +Y+ +I G    G +  A+ +  E
Sbjct: 322 FTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYE 381

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
            + +G   ++  YN L+ GL K G V  A     +M+     PDI +YN ++ G C+ G 
Sbjct: 382 AMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGC 441

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           + +A  + ++  ++  +P + T+NTLIDG C+  +++ A ++ + M++ GI PDVITY  
Sbjct: 442 LSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNT 501

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           ++NG CK   L    + F  ML KG  P+   Y   I    K    SEA  L +EM  +G
Sbjct: 502 LLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRG 561

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD-GFIPDHITYTSIIHASLEMGDLRRG 577
             PD++T   L+ GLC  G L++A EL   +  +  F      +  +I+A     ++   
Sbjct: 562 LTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMA 621

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
             LF+ M     +P   TY V+I ++   G ++LA  +  E   KG+ P+  T   ++N 
Sbjct: 622 EKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNC 681

Query: 638 LCRLRRIDQAYGLFIDMEEEGILP 661
           LC   R+ +A  +   M + GI+P
Sbjct: 682 LCVTHRLSEAVVIINLMVQNGIVP 705



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 119/387 (30%), Positives = 201/387 (51%), Gaps = 3/387 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K  M++    +    +  G +PD    + +I  L ++G   +A  V+    E G K S
Sbjct: 331 FCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHS 390

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           I+ YNT++    K+G + +AL+L+ +M   GCSP+  TYN+++ G  + G L  A G++ 
Sbjct: 391 IILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILN 450

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           D +  G      ++N +I GY ++  + +A+ + + M++ G+ P + TYN L+ GLCK  
Sbjct: 451 DAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKAR 510

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           ++ +    F  ML K   P+II+YN L+  +C+   + EA  LF E+++R L P +VT  
Sbjct: 511 KLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLC 570

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILP-DVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           TLI GLC  G+L+ A +L   +  +         + IM+N  C   N+SMA + F++M  
Sbjct: 571 TLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGG 630

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
               PD + Y   I    K G+   A+    E ++KG  P   T   +++ LC    L E
Sbjct: 631 SDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSE 690

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHAS 568
           A  ++  MV +G +P+ +   SI  A 
Sbjct: 691 AVVIINLMVQNGIVPEEV--NSIFEAD 715



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 130/275 (47%), Gaps = 52/275 (18%)

Query: 154 NMHGILDVLIGGGLSSCV-SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCN 212
           + +GIL+  I  G   C+  I   + L+  Y K+  +++ + + + ML +G+ PDV   N
Sbjct: 444 DANGILNDAIAKG---CIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYN 500

Query: 213 RIIKVLRDNGFSVKAR------EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELL 266
            ++     NG   KAR      + ++ M E G  P+I+TYN +++SFCK+ ++ EA+EL 
Sbjct: 501 TLL-----NGL-CKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELF 554

Query: 267 WEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK-------------------L 307
            EM+ RG +P+ VT   LI G   NGEL++A  L   + K                    
Sbjct: 555 KEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCX 614

Query: 308 GLKVSA-----------------HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
            L VS                  ++Y  +I  Y + G +  A     E +++G+ P+  T
Sbjct: 615 KLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTT 674

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
              ++  LC   R+S+A      M++  ++P+ ++
Sbjct: 675 CGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEVN 709



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 92/188 (48%)

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G ++EA  +  +M      P   +Y +I++  +E G   +   ++  M   G+ P + T+
Sbjct: 90  GKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTH 149

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
           T+ + +    GR   A    + M  +G   N ++Y A+I+G  +     +AY LF +M +
Sbjct: 150 TIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLK 209

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVH 716
           +GI P+  T+  LI+  C  GN QE+ +L+ +++ R + P+  T +  +     K     
Sbjct: 210 QGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDE 269

Query: 717 AVEYLESL 724
           A   LES+
Sbjct: 270 AARLLESI 277



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 3/156 (1%)

Query: 552 DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV--TYTVLIHAHAARGRL 609
           DGF     TY  +I      G      D+   M RK +   ++   Y  ++  +  +G++
Sbjct: 34  DGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEM-RKNVDSKMLEGVYIGIMRDYGRKGKV 92

Query: 610 ELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL 669
           + A   F  M      P+V +YNA++N L       QA+ +++ M++ GI P+ YT+TI 
Sbjct: 93  QEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIR 152

Query: 670 INENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +   C  G    ALRL   M  +  E +  ++ A++
Sbjct: 153 MKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVI 188


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  318 bits (814), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 186/529 (35%), Positives = 287/529 (54%), Gaps = 18/529 (3%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F +M   G++PDV +   +I     +G   KA+ ++  M + GI+  + T + ++D  C
Sbjct: 143 LFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILC 202

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           KEG++ EA ELL  M  RGC  + VTY+ LI G      + +A  L   M KLG +  A 
Sbjct: 203 KEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAI 262

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTR------GVAPTLATYNILIYGLCKWGRVSDAR 368
           +Y  ++ G  + G +  AL L +EM+           PTL +Y+I+I GLCK  R  +AR
Sbjct: 263 AYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEAR 322

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F EM  + ++PD+ISY TL++G+C SG   +A  LF+E+    + P V T + LID L
Sbjct: 323 ELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDML 382

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G +  A +L E +I +G +PDV+T T +V G C    +S A + F +M + G  P+ 
Sbjct: 383 CKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNV 442

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP------PDLITYNVLVHGLCKLGSLEEA 542
               T + G  + G+   A  L + ML+   P      P+ I+Y++++ GLCK G  +EA
Sbjct: 443 VTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEA 502

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            EL ++M   G IPD I+YTS+IH     G  +  + LFN M+  G+ P + T++VLI  
Sbjct: 503 RELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDM 562

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
               G++  A      M  +G  PN +TY  L+ GLC   RI +A  LF+ M++ G LP+
Sbjct: 563 LCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPD 622

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLD------REIEPDYCTHSALL 705
             TY  L+   C  GN + AL L+K+ML          +PD  ++S ++
Sbjct: 623 VVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIII 671



 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 171/469 (36%), Positives = 260/469 (55%), Gaps = 12/469 (2%)

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M   GI+P + T   ++D FCKEG++ EA ELL  M  RGC  + VTY+ LI G      
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR------GVAPT 347
           + +A  L   M KLG +  A +Y  ++ G  + G +  AL+L +EM+           PT
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 348 LATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFD 407
           L +Y+I+I GLCK  R  +AR  F EM  + ++PD+ISY +L++G+CRSG   +A  LF+
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 408 ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG 467
           E+    +   V T + LID LC+ G +  A +L E MI +G + D++TY+ ++ G C   
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKH 240

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK------GFPP 521
            +S A   F  M + G +PD  AY T + G  + G+ + A +L +EML           P
Sbjct: 241 RISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKP 300

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
            LI+Y++++ GLCK    +EA EL ++M   G +PD I+YT++IH     G   + + LF
Sbjct: 301 TLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLF 360

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
           N ML  G+ P + T +VLI     +G++  A      +  +G  P+V+T   L+ GLC  
Sbjct: 361 NEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMK 420

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
            RI +A  LF+ M++ G +PN  T   L+   C +GN + AL L+K ML
Sbjct: 421 HRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNML 469



 Score =  295 bits (756), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 182/583 (31%), Positives = 309/583 (53%), Gaps = 32/583 (5%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G++ D      +++IL + G +  A  ++E  V +    ILD++    L     IK L +
Sbjct: 186 GIRSDVTTSSMLIDILCKEGKVIEANELLE--VMIQRGCILDIVTYSTL-----IKGLCM 238

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM---- 234
                  K  + +   +F  M + G  PD      ++K L   G    A ++++ M    
Sbjct: 239 -------KHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDT 291

Query: 235 GEFGIK--PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
           G +GIK  P++++Y+ ++D  CK+    EA EL  EM+ +G  P+ ++Y  LI GF  +G
Sbjct: 292 GRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSG 351

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
           + E+A+ L  +ML +G++    + + +I    +KG ++EA  L E ++ RG  P + T  
Sbjct: 352 KWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCT 411

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
            L+ GLC   R+S A   F +M +   +P++++  TL+ G C+SGNI  A  L   + S 
Sbjct: 412 TLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSD 471

Query: 413 ------NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
                 N  P  ++Y+ +IDGLC+ G  + A++L + M   G++PDVI+YT +++G C+ 
Sbjct: 472 TSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRS 531

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G    A+  FNEM+  G+QPD   ++  I    K G   EA  L E M+ +G  P+ +TY
Sbjct: 532 GKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTY 591

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
             LV GLC    + EA +L  KM   G +PD +TY +++    + G+++   +L   ML 
Sbjct: 592 TTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLS 651

Query: 587 K------GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
                     P +++Y+++I      GR + A   F EM+  G+ PNVI+Y +LI+G CR
Sbjct: 652 DTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCR 711

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
             +++ A  LF +M ++G+  N  TY+++I+  C  G   +AL
Sbjct: 712 SGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 754



 Score =  293 bits (750), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 184/586 (31%), Positives = 312/586 (53%), Gaps = 27/586 (4%)

Query: 138 GLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFN 197
           G  RS  W  E   C+  + +LDV    G+ S V+     +L+ I  K+  V +   +  
Sbjct: 165 GFCRSGKW--EKAKCL-FNEMLDV----GIRSDVTTS--SMLIDILCKEGKVIEANELLE 215

Query: 198 KMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG 257
            M++ G + D+   + +IK L       +A  ++  M + G +P  + Y T++   C+ G
Sbjct: 216 VMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTG 275

Query: 258 EMQEALELLWEM------QGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKV 311
            +  AL+L  EM       G  C P  ++Y+++I G  ++   ++AR L ++M   G+  
Sbjct: 276 NINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMP 335

Query: 312 SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRF 371
              SY  +I G+   G   +A  L  EM+  G+ P + T ++LI  LCK G+V +A    
Sbjct: 336 DVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLL 395

Query: 372 FEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY 431
             ++++  IPD+++  TL+ G C    I +A  LF +++    +P VVT  TL+ GLC+ 
Sbjct: 396 EVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQS 455

Query: 432 GDLEVAQQLKENMINQ----GI--LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           G++++A +L +NM++     GI   P+ I+Y+I+++G CK G    ARE F EM   G+ 
Sbjct: 456 GNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVI 515

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           PD  +YT+ I G  + G   +A  L  EM+  G  PD+ T++VL+  LCK G + EANEL
Sbjct: 516 PDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANEL 575

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
           L  M+  G IP+ +TYT+++        +     LF  M + G  P +VTY  L+     
Sbjct: 576 LEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQ 635

Query: 606 RGRLELAFMYFSEMQVK------GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
            G ++ A     +M           +P+VI+Y+ +I+GLC+  R D+A  LF +M+  G+
Sbjct: 636 TGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGV 695

Query: 660 LPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +PN  +YT LI+  C +G  ++A  L+ EM+D+ ++ +  T+S ++
Sbjct: 696 IPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMI 741



 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 184/580 (31%), Positives = 291/580 (50%), Gaps = 55/580 (9%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           ML  G+ PDV     +I +    G  ++A E+  +M + G    IVTY+T++   C +  
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL------------------------ 294
           + EA +L   M+  GC P+ + Y  L+ G  + G++                        
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 295 -----------------EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
                            ++AR L ++M   G+     SY  +I G+   G   +A  L  
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
           EM+  G+   + T ++LI  LCK G+V +A      M+++  I DI++Y+TL+ G C   
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKH 240

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ----GI--LP 451
            I EA  LF  ++     P  + Y TL+ GLC+ G++  A QL + M+N     GI   P
Sbjct: 241 RISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKP 300

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
            +I+Y+I+++G CK      ARE F EM  +G+ PD  +YTT I G    G   +A  L 
Sbjct: 301 TLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLF 360

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
            EML  G  PD+ T +VL+  LCK G + EAN+LL  ++  G IPD +T T+++      
Sbjct: 361 NEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMK 420

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM----YFSEMQVKGI--R 625
             + +   LF  M + G  P +VT   L+      G +++A        S+    GI  +
Sbjct: 421 HRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCK 480

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           PN I+Y+ +I+GLC+  R D+A  LF +M+  G++P+  +YT LI+  C +G W++A  L
Sbjct: 481 PNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYL 540

Query: 686 YKEMLDREIEPDYCTHSALLLKQLDKDYKV-HAVEYLESL 724
           + EM+D  ++PD  T S +L+  L K+ KV  A E LE +
Sbjct: 541 FNEMVDIGVQPDVTTFS-VLIDMLCKEGKVIEANELLEVM 579



 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 153/439 (34%), Positives = 243/439 (55%), Gaps = 14/439 (3%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F +M   G++PDV +   +I     +G   KA+ ++  M + GI+P + T + ++D  C
Sbjct: 324 LFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLC 383

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K+G++ EA +LL  +  RGC P+ VT   L+ G      + +A  L   M KLG   +  
Sbjct: 384 KKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVV 443

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTR------GVAPTLATYNILIYGLCKWGRVSDAR 368
           +   ++ G  + G +  AL L + M++          P   +Y+I+I GLCK GR  +AR
Sbjct: 444 TCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEAR 503

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F EM    VIPD+ISY +L++G+CRSG   +A  LF+E+    + P V T++ LID L
Sbjct: 504 ELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDML 563

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G +  A +L E MI +G +P+ +TYT +V G C    +S A + F +M + G  PD 
Sbjct: 564 CKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDV 623

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAK------GFPPDLITYNVLVHGLCKLGSLEEA 542
             Y T + G  + G+   A  L ++ML+        F PD+I+Y++++ GLCK G  +EA
Sbjct: 624 VTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEA 683

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            EL ++M   G IP+ I+YTS+IH     G L   + LFN M+ +G+    VTY+V+IH 
Sbjct: 684 RELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHG 743

Query: 603 HAARGRLELAFMYFSEMQV 621
               G+++ A   F +M+ 
Sbjct: 744 FCKEGQIDKAL--FQKMEA 760


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 173/531 (32%), Positives = 289/531 (54%), Gaps = 4/531 (0%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           M   G  PDV   + II  L   G   +A E+   M E G+ P + TY  ++D  C+ G+
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           + EA EL  +M  RGCS N V YN LI G  ++  +E+A  L+ +M   G +    +YN 
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRF--FEMLR 376
           I+ G    G + EA    + M +RG +P +  YN L+  L K G+V++A   F   +M  
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 377 KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
           + V PD+I+YNTL+ G+CR     EA  LF ++ ++  +P  VTYN+++ GL R  +++ 
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
           A+++ + M++ G  P+  TY+I+++G C++GN++   E + EM  K   PD       I 
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVID 300

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
              K     +A+++ EEM   G  PD++TYN+L+ GLCK   +++A+EL   MV +G  P
Sbjct: 301 MLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAP 360

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
           D ++Y+ +++   +   +   R LF+ M+ + L P +VT+ +L+      G+L+ A    
Sbjct: 361 DIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLL 420

Query: 617 SEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNA 676
             M    + P+ +T   L++GLCR +R D+A  LF  M E+G + +   + I++   C  
Sbjct: 421 DVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCRE 480

Query: 677 GNWQEALRLYKEML--DREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
           G   +AL  +K M+  D E  PD  T++ L+   ++      AV+Y + +T
Sbjct: 481 GKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMT 531



 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 160/548 (29%), Positives = 265/548 (48%), Gaps = 41/548 (7%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   V + L +  +M   G+ PDV     I+  L   G   +A E++  M E G   + V
Sbjct: 22  KTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELFHKMIERGCSANTV 81

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
            YN +++  CK+  ++ A +LL EM  +G  P+ +TYN +++G  R G++ +A+     M
Sbjct: 82  AYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSM 141

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE--EMVTRGVAPTLATYNILIYGLCKWG 362
              G      +YN ++    ++G + EA  L +  +M  R VAP L TYN LI G C+  
Sbjct: 142 PSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVE 201

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYG------------------------------ 392
           +  +A   F +++ K  +PD ++YN++L G                              
Sbjct: 202 KTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYS 261

Query: 393 -----YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
                +CR GN+     L++E+  +   P V+  N +ID LC+   ++ A ++ E M   
Sbjct: 262 IVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKI 321

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
           G +PDV+TY I+++G CK   +  A E F+ M+  G  PD  +Y+  + G  K     +A
Sbjct: 322 GAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDA 381

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
             L + M+ +   PD++T+N+L+ GLCK G L+EA +LL  M     +PD +T T+++H 
Sbjct: 382 RVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHG 441

Query: 568 SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG---I 624
                       LF  M+ KG    ++ + +++      G+L  A ++F  M VK     
Sbjct: 442 LCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSM-VKSDGEF 500

Query: 625 RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
            P+V+TY  L+N L    R+DQA   F  M   G  P+   Y  L+N     G   +A R
Sbjct: 501 SPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADR 560

Query: 685 LYKEMLDR 692
           L + M ++
Sbjct: 561 LTQAMKEK 568



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 154/482 (31%), Positives = 251/482 (52%), Gaps = 4/482 (0%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   +E+   +  +M   G  PD    N I+  L   G   +A++ +  M   G  P +V
Sbjct: 92  KDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVV 151

Query: 245 TYNTMLDSFCKEGEMQEALELL--WEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            YN +LD+  KEG++ EA  L    +M  R  +P+ +TYN LI GF R  + ++A  L +
Sbjct: 152 AYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFK 211

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           D++  G      +YN I+ G + K  + EA  + ++MV  G AP  ATY+I++ G C+ G
Sbjct: 212 DVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVG 271

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            ++     + EM  K   PD++  N ++   C++  + +A  + +E+     VP VVTYN
Sbjct: 272 NMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYN 331

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            L+DGLC+   ++ A +L   M++ G  PD+++Y++++NG CK   +  AR  F+ M+ +
Sbjct: 332 ILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIER 391

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
            L PD   +   + G  K G   EA  L + M      PD +T   L+HGLC+    +EA
Sbjct: 392 KLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEA 451

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG--LSPTLVTYTVLI 600
             L + MV  G + D + +  ++      G L +    F +M++     SP +VTYT L+
Sbjct: 452 VRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLV 511

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
           +A    GR++ A  YF +M   G  P+ + YN L+NGL +  R  QA  L   M+E+G L
Sbjct: 512 NALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFL 571

Query: 661 PN 662
            +
Sbjct: 572 SD 573



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 230/453 (50%), Gaps = 15/453 (3%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           A +FF  + ++ G   D   +  +L+ L + G +  A+ + +T+   +     D++    
Sbjct: 134 AKQFFDSMPSR-GYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLIT--- 189

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
                     + L+  + +    ++ + +F  ++  G +PD    N I+  L       +
Sbjct: 190 ---------YNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A E+++ M + G  P+  TY+ +L   C+ G M   LEL  EM  +  SP+ +  N +I 
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVID 300

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
              +  +++ A  ++ +M K+G      +YN ++ G  +  L+ +A  L   MV  G AP
Sbjct: 301 MLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAP 360

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
            + +Y++++ GLCK  +V DAR  F  M+ + ++PD++++N L+ G C++G + EA  L 
Sbjct: 361 DIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLL 420

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
           D +   N++P  VT  TL+ GLCR    + A +L + M+ +G + DV+ + I++ G C+ 
Sbjct: 421 DVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCRE 480

Query: 467 GNLSMAREFFNEMLRKG--LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
           G L+ A  FF  M++      PD   YTT +   ++ G   +A    ++M   G  PD +
Sbjct: 481 GKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYV 540

Query: 525 TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
            YN L++GL K G   +A+ L + M   GF+ D
Sbjct: 541 AYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 573



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 146/301 (48%), Gaps = 2/301 (0%)

Query: 191 QCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTML 250
           +CL ++ +M      PDV  CN +I +L        A +V   M + G  P +VTYN +L
Sbjct: 275 RCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILL 334

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
           D  CK   + +A EL   M   GC+P+ V+Y+V++ G  +  ++  AR L   M++  L 
Sbjct: 335 DGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLV 394

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
               ++N ++ G  + G L EA +L + M    V P   T   L++GLC+  R  +A   
Sbjct: 395 PDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRL 454

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN--LVPTVVTYNTLIDGL 428
           F  M+ K  + D++ +N +L G CR G + +A L F  +   +    P VVTY TL++ L
Sbjct: 455 FQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNAL 514

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
              G ++ A    + M   G  PD + Y  ++NG  K G    A      M  KG   D 
Sbjct: 515 IEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDC 574

Query: 489 F 489
           F
Sbjct: 575 F 575


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 198/641 (30%), Positives = 318/641 (49%), Gaps = 17/641 (2%)

Query: 90  PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVET 149
           P ++ RVL ++ +  + A++FF W   QPG K  +F    +L   +     + AY + + 
Sbjct: 99  PSVVGRVLQQLDDLDK-AVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKN 157

Query: 150 VVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVK 209
             C             GL S  SI     L+  + K    +Q   + ++M + G++P   
Sbjct: 158 HRC-------------GLCSPDSI-TYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNA 203

Query: 210 NCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM 269
             N IIK L DNG    A   YR M +    PS++TY  ++D+ CK   + +A  +L +M
Sbjct: 204 VYNTIIKGLCDNGRVDSALVHYRDM-QRNCAPSVITYTILVDALCKSARISDASLILEDM 262

Query: 270 QGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLL 329
              GC+PN VTYN LI GF + G +++A  L   ML+        +YN +I GY ++   
Sbjct: 263 IEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERP 322

Query: 330 VEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTL 389
            +   L +EMV  G  P   TYN L+  L K G+  DA +    MLR++  P   ++N +
Sbjct: 323 QDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLM 382

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
           +  +C+ G +  A+ LF  +  R  +P + TYN +I G CR   ++ A+QL E M   G 
Sbjct: 383 IDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGC 442

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
            PDV+TY  +V+G CK   +  A E +  +   G   D    +T I G  K     +A +
Sbjct: 443 PPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEK 502

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           L  EM   G  PD++ Y +L+HG CK   L+++     +M+  G +P  ITY+ +I    
Sbjct: 503 LLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLC 562

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
           +   +R G  L   ML +G++P  + YT +I         + A+  +  M+  G  P V+
Sbjct: 563 KSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVV 622

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           TYN L++ LC++ R+D+A  L   ME +G LP+  TY  + +    +    +A RL++ M
Sbjct: 623 TYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAM 682

Query: 690 LDREIEPDYCTHSALLLKQLDKDYKVHAVE-YLESLTLGAE 729
             R   P    +S LL K + ++    A+E + E+L  GA+
Sbjct: 683 KSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGAD 723



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 158/348 (45%), Gaps = 37/348 (10%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK-VLRDNGFSVKAREVYRMM 234
            +L++ ++ K   ++    +F  M   G LPD+   N +I    R N     AR++   M
Sbjct: 379 FNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRID-DARQLLERM 437

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
            E G  P +VTYN+++   CK  ++ EA E+   ++  G   + VT + LI G  ++  L
Sbjct: 438 TEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRL 497

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           + A  L+R+M + G      +Y  +I G+ +   L ++L    EM+ +G  PT+ TY+I+
Sbjct: 498 DDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIV 557

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           I  LCK  RV D       ML + V PD I Y +++ G C+S +  EA+ L+  ++    
Sbjct: 558 IDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGC 617

Query: 415 VPTVVTY-----------------------------------NTLIDGLCRYGDLEVAQQ 439
            PTVVTY                                   N++ DG  +  + + A +
Sbjct: 618 APTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFR 677

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           L + M ++G  P    Y++++        +  A E + E L  G   D
Sbjct: 678 LFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVD 725


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 169/480 (35%), Positives = 272/480 (56%)

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           +A   +  M + G  P+  TYN +++ FCK  ++  A  LL EM+  G +PN VTY+ +I
Sbjct: 25  EATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVI 84

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            GF R  +++ A  L R M++ G   +  +YN ++ G    GL+ EA  L +EM  RG+ 
Sbjct: 85  HGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQ 144

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P   +Y+ L+ GLCK G++  A   F +    +  PD+++Y+TL+ G C++G + EA  L
Sbjct: 145 PDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKL 204

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
           F+++R  +  P VVT+  L+DGLC+   L+ AQQ+ E M ++   P+VITY+ +++G CK
Sbjct: 205 FEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCK 264

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
            G +  A+E F  M+ +G++P+   Y + I G         A  L EEM A G  PD+IT
Sbjct: 265 TGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIIT 324

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           YN L+ GLCK G   EAN L   M      PD ITY+ +I    ++  +   R LF++ML
Sbjct: 325 YNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDML 384

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
           ++ + P +VT++ L+  +   G ++ A     EM      P+V TY +L++G C++ R+ 
Sbjct: 385 KQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMV 444

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +A  +   M + G  PN  TYT LI+  C AG    A +L +EM+   ++P+  T+ +L+
Sbjct: 445 EARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLI 504



 Score =  306 bits (784), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 175/505 (34%), Positives = 273/505 (54%), Gaps = 15/505 (2%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRM------MGEFGIKPSIVTYNTM 249
           F KM + G +P+    N +I     NGF  K  +V+R       M E G+ P++VTY+T+
Sbjct: 30  FAKMKKKGTVPNEWTYNVLI-----NGF-CKVHKVHRAYLLLKEMKESGLAPNVVTYSTV 83

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           +  FC++ ++  A +L  +M   GC PN VTYN L++G  RNG +++A  L+ +M + GL
Sbjct: 84  IHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGL 143

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
           +    SY+ ++ G  + G +  AL + E+       P +  Y+ LI GLCK GR+ +A  
Sbjct: 144 QPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEA-C 202

Query: 370 RFFEMLRKNVI-PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
           + FE +R+N   PD++++  L+ G C+   + EA  + + +  RN  P V+TY++LIDGL
Sbjct: 203 KLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGL 262

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G +  AQ++ + MI +GI P+V+TY  +++G C    +  A     EM   G  PD 
Sbjct: 263 CKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDI 322

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             Y T I G  K G   EA RL  +M AK   PD+ITY+ L+ G CKL  ++ A  L   
Sbjct: 323 ITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDD 382

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M+    +PD +T+++++      G +     L   M+    SP + TYT L+      GR
Sbjct: 383 MLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGR 442

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           +  A      M  +G +PNV+TY ALI+  CR  +   AY L  +M   G+ PN  TY  
Sbjct: 443 MVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRS 502

Query: 669 LINENCNAGNWQEALRLYKEMLDRE 693
           LI   C  G+ +EA ++  E L+R+
Sbjct: 503 LIGGFCGTGDLEEARKML-ERLERD 526



 Score =  305 bits (782), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 176/551 (31%), Positives = 283/551 (51%), Gaps = 1/551 (0%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           ++L+  + K   V +  L+  +M  +GL P+V   + +I           A +++R M E
Sbjct: 46  NVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVE 105

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G  P++VTYNT+L   C+ G M EA ELL EM+ RG  P+  +Y+ L+ G  + G+++ 
Sbjct: 106 NGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDM 165

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  +  D           +Y+ +I G  + G L EA  L E+M      P + T+  L+ 
Sbjct: 166 ALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMD 225

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           GLCK  R+ +A+     M  +N  P++I+Y++L+ G C++G + +A  +F  +  R + P
Sbjct: 226 GLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEP 285

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
            VVTYN+LI G C    ++ A  L E M   G LPD+ITY  +++G CK G    A   F
Sbjct: 286 NVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLF 345

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
            +M  K   PD   Y+  I G  KL     A  L ++ML +   PD++T++ LV G C  
Sbjct: 346 GDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNA 405

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G +++A  LL +MV     PD  TYTS++    ++G +   R +   M ++G  P +VTY
Sbjct: 406 GLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTY 465

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME- 655
           T LI A    G+  +A+    EM   G++PNVITY +LI G C    +++A  +   +E 
Sbjct: 466 TALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLER 525

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKV 715
           +E    + + Y ++++  C  G    AL L + +      P +  + AL+          
Sbjct: 526 DENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELG 585

Query: 716 HAVEYLESLTL 726
            A+E LE +TL
Sbjct: 586 KAMEVLEEMTL 596



 Score =  303 bits (776), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 164/525 (31%), Positives = 281/525 (53%), Gaps = 2/525 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + +++ V+    +F +M+ NG +P++   N ++  L  NG   +A E+   M E G++P 
Sbjct: 87  FCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPD 146

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             +Y+T++   CK G++  AL++  +     C P+ V Y+ LI G  + G L++A  L  
Sbjct: 147 KFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFE 206

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M +   +    ++  ++ G  +   L EA  + E M  R   P + TY+ LI GLCK G
Sbjct: 207 KMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTG 266

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           +V DA+  F  M+ + + P++++YN+L++G+C +  +  A LL +E+ +   +P ++TYN
Sbjct: 267 QVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYN 326

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           TLIDGLC+ G    A +L  +M  +   PDVITY+ ++ G CK+  + MAR  F++ML++
Sbjct: 327 TLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQ 386

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
            + PD   ++T + G    G   +A RL EEM+A    PD+ TY  LV G CK+G + EA
Sbjct: 387 AVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEA 446

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             +L++M   G  P+ +TYT++I A    G       L   M+  G+ P ++TY  LI  
Sbjct: 447 RRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGG 506

Query: 603 HAARGRLELAFMYFSEMQV-KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
               G LE A      ++  +  + ++  Y  +++GLCR  R+  A  L   +++ G  P
Sbjct: 507 FCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPP 566

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEM-LDREIEPDYCTHSALL 705
               Y  LI   C      +A+ + +EM L R+  P+   + A++
Sbjct: 567 RHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVI 611



 Score =  289 bits (739), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 153/464 (32%), Positives = 252/464 (54%)

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
           +++T+  M+D  CK   + EA     +M+ +G  PN  TYNVLI GF +  ++ +A  L+
Sbjct: 6   NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
           ++M + GL  +  +Y+ +I G+  +  +  A  L  +MV  G  P L TYN L+ GLC+ 
Sbjct: 66  KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN 125

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           G + +A     EM  + + PD  SY+TL+ G C++G I  A  +F++  + +  P VV Y
Sbjct: 126 GLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAY 185

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           +TLI GLC+ G L+ A +L E M      PDV+T+T +++G CK   L  A++    M  
Sbjct: 186 STLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMED 245

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
           +   P+   Y++ I G  K G   +A  + + M+ +G  P+++TYN L+HG C    ++ 
Sbjct: 246 RNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDS 305

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A  L+ +M   G +PD ITY ++I    + G       LF +M  K  +P ++TY+ LI 
Sbjct: 306 ALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIG 365

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
                 R+++A   F +M  + + P+V+T++ L+ G C    +D A  L  +M      P
Sbjct: 366 GFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSP 425

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           + YTYT L++  C  G   EA R+ K M  R  +P+  T++AL+
Sbjct: 426 DVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALI 469



 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 173/550 (31%), Positives = 270/550 (49%), Gaps = 17/550 (3%)

Query: 103 KPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVL 162
           K   A + FR +  + G   +   + T+L  L  +GL+  AY             +LD +
Sbjct: 92  KVDTAYKLFRQM-VENGCMPNLVTYNTLLSGLCRNGLMDEAYE------------LLDEM 138

Query: 163 IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG 222
              GL         D L+    K   ++  L VF         PDV   + +I  L   G
Sbjct: 139 RERGLQP--DKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTG 196

Query: 223 FSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYN 282
              +A +++  M E   +P +VT+  ++D  CK   +QEA ++L  M+ R C+PN +TY+
Sbjct: 197 RLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYS 256

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
            LI G  + G++  A+ + + M+  G++ +  +YN +I G+     +  AL L EEM   
Sbjct: 257 SLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTAT 316

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           G  P + TYN LI GLCK GR  +A   F +M  K   PD+I+Y+ L+ G+C+   I  A
Sbjct: 317 GCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMA 376

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
             LFD++  + ++P VVT++TL++G C  G ++ A++L E M+     PDV TYT +V+G
Sbjct: 377 RTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDG 436

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            CK+G +  AR     M ++G QP+   YT  I    + G  + AY+L EEM+  G  P+
Sbjct: 437 FCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPN 496

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGD-GFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           +ITY  L+ G C  G LEEA ++L ++  D     D   Y  ++      G +    +L 
Sbjct: 497 VITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELL 556

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV-KGIRPNVITYNALINGLCR 640
             + + G  P    Y  LI        L  A     EM + +  RPN   Y A+I  L R
Sbjct: 557 EAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAR 616

Query: 641 LRRIDQAYGL 650
             R ++A  L
Sbjct: 617 EGRHEEANAL 626



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/371 (31%), Positives = 193/371 (52%), Gaps = 4/371 (1%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK-VLRDNGFSVKAREVYRMMGEFGIKPSI 243
           K   V     VF +M+  G+ P+V   N +I      NG    A  +   M   G  P I
Sbjct: 264 KTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVD-SALLLMEEMTATGCLPDI 322

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           +TYNT++D  CK G   EA  L  +M+ + C+P+ +TY+ LI GF +   ++ AR L  D
Sbjct: 323 ITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDD 382

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           MLK  +     +++ ++ GY   GL+ +A  L EEMV    +P + TY  L+ G CK GR
Sbjct: 383 MLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGR 442

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           + +AR     M ++   P++++Y  L+  +CR+G    A+ L +E+    + P V+TY +
Sbjct: 443 MVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRS 502

Query: 424 LIDGLCRYGDLEVAQQLKENM-INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           LI G C  GDLE A+++ E +  ++    D+  Y +M++G C+ G +S A E    + + 
Sbjct: 503 LIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQS 562

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM-LAKGFPPDLITYNVLVHGLCKLGSLEE 541
           G  P    Y   I G  +  +  +A  + EEM L++   P+   Y  ++  L + G  EE
Sbjct: 563 GTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEE 622

Query: 542 ANELLRKMVGD 552
           AN L  +++G+
Sbjct: 623 ANALADELLGN 633



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 128/273 (46%), Gaps = 35/273 (12%)

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           +VIT+TIM++G CK   L  A  +F +M +K                             
Sbjct: 6   NVITWTIMIDGLCKANRLPEATTYFAKMKKK----------------------------- 36

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
                 G  P+  TYNVL++G CK+  +  A  LL++M   G  P+ +TY+++IH     
Sbjct: 37  ------GTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQ 90

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
             +     LF  M+  G  P LVTY  L+      G ++ A+    EM+ +G++P+  +Y
Sbjct: 91  TKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSY 150

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           + L+ GLC+  +ID A  +F D       P+   Y+ LI   C  G   EA +L+++M +
Sbjct: 151 DTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRE 210

Query: 692 REIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
              EPD  T +AL+      D    A + LE++
Sbjct: 211 NSCEPDVVTFTALMDGLCKGDRLQEAQQVLETM 243


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  316 bits (810), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 193/608 (31%), Positives = 313/608 (51%), Gaps = 19/608 (3%)

Query: 99  RIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGI 158
           R   +P +A++FF W   Q G K D   +  +L+IL++SG       V +          
Sbjct: 2   RRSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYK---------- 51

Query: 159 LDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL 218
            D+L  G   + V+ KIL   +    K     + L     +    + PDV   N +I  L
Sbjct: 52  -DLLHSGCSPNLVTFKIL---IRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGL 107

Query: 219 RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM--QGRGCSP 276
             +G   +A +++  M    +KP IVTYNT++   CK G +++A ELL EM  +G   +P
Sbjct: 108 FKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAP 167

Query: 277 NGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLE 336
           + VTYN LI  F R   + +A      M   G+     + N ++ G  + G + EAL + 
Sbjct: 168 DIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEIL 227

Query: 337 EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS 396
           + M   G  P + TYN +I+ LC  G+V +A      M   +  PD++++NTLL G+C++
Sbjct: 228 DGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKA 284

Query: 397 GNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
           G +  A  + +E+   N++P V+TY  L++GLCR G ++VA  L E ++ QG +PDVI Y
Sbjct: 285 GMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAY 344

Query: 457 TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA 516
           T +V+G CK G +  A +   EM  +G +     Y++ ++G  + G+  +A  +  EM++
Sbjct: 345 TSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVS 404

Query: 517 KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
               P L TYN+++ GL K GS+ +A  L+  +V  G++PD +TY ++I    +   +R 
Sbjct: 405 INMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVRE 464

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
             DL + M  +G  P  VT   ++      GR++ A+    EM  K   PNV+ Y +LI+
Sbjct: 465 ACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLID 524

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
           GLC+  R+D A  +   M  +G+  + + Y  LI    + G   EA+ +Y EM+ R   P
Sbjct: 525 GLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLP 584

Query: 697 DYCTHSAL 704
           D  T   L
Sbjct: 585 DGSTSKTL 592



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 129/385 (33%), Positives = 201/385 (52%), Gaps = 3/385 (0%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   VE+ L + + M   G +PDV   N II  L   G  V+A E+ + M      P +V
Sbjct: 216 KDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMS---CSPDLV 272

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           T+NT+LD FCK G +  ALE+L EM      P+ +TY +L+ G  R G+++ A  L+ ++
Sbjct: 273 TFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEI 332

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           ++ G      +Y  ++ G  + G + EA  L +EM  RG    +  Y+ L+ G C+ G V
Sbjct: 333 VRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNV 392

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
             AR    EM+  N++P + +YN +L G  + G+I +A  L  +L +R  VP VVTYNTL
Sbjct: 393 HKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTL 452

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           IDGLC+   +  A  L + M ++G  P+ +T   +V G C++G +  A     EM RK  
Sbjct: 453 IDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRH 512

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            P+   YT+ I G  K     +A  + + M  +G   D   Y  L+  +   G + EA  
Sbjct: 513 APNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMA 572

Query: 545 LLRKMVGDGFIPDHITYTSIIHASL 569
           +  +MV  GF+PD  T  ++  A++
Sbjct: 573 MYDEMVARGFLPDGSTSKTLEEAAM 597



 Score = 46.6 bits (109), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 4/120 (3%)

Query: 608 RLELAFMYFS-EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
           R +LA  +F    +  G + +V +YN L++ L +     +   ++ D+   G  PN  T+
Sbjct: 6   RPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTF 65

Query: 667 TILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL---LLKQLDKDYKVHAVEYLES 723
            ILI  NC AG    AL   + + +  + PD    + L   L K  + D  V   E +ES
Sbjct: 66  KILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMES 125


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  315 bits (808), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 191/606 (31%), Positives = 314/606 (51%), Gaps = 15/606 (2%)

Query: 93  LVRVLNRIREKPRIALRFFRW--VETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETV 150
           L+ VL  I+    + L FF W  V  +P ++      C I+ I + S  LR A+ +V   
Sbjct: 105 LIWVLMNIKNDYNLVLAFFDWARVRREPSLE----ARCIIIHIAVVSNDLRLAHELVHDY 160

Query: 151 -------VCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNG 203
                  + V M      LI        +    D+   +  +   + +   + +K+L  G
Sbjct: 161 FLNSKLEIGVKMTQFTHRLIYTYKYWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYG 220

Query: 204 LLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEAL 263
           L+  V +CN  +  + +N   ++     ++  E+GI  +  +YN ++ S C+ G+++EA 
Sbjct: 221 LVVTVDSCNAFLSRIANNSEGIEM--AIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAH 278

Query: 264 ELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGY 323
            LL +M  R  +P+ V+Y+ +I G+   GEL++A  L+ DM   GLK + ++YN II   
Sbjct: 279 RLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLL 338

Query: 324 SEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
            + G   EA  +  EM+++ + P    Y  LI+G  K G V  A   F EML K + PD 
Sbjct: 339 CKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDY 398

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
           I+Y TL+ G+ + G + E   LF E+ SR L P  VTY TLID  C+ G++  A  L   
Sbjct: 399 ITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNE 458

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           M+  G+ P+++TY  +++G CK G L  A E  +EM +KGLQ +   Y + + G  K G+
Sbjct: 459 MVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGN 518

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
             +A +L +EM   G  PD ITY  ++   C+LG +++A++LL++M+  G  P  +T+  
Sbjct: 519 IEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNV 578

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           +++    +G L  G  L   ML KG+ P  +TY  L+  H  R  +      +  M+ +G
Sbjct: 579 LMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQG 638

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
           + P+  TYN LI G C+ R + +A+ L+ +M E+G +P   +Y  LI        + EA 
Sbjct: 639 VAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEAR 698

Query: 684 RLYKEM 689
            L++EM
Sbjct: 699 ELFEEM 704



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 137/436 (31%), Positives = 208/436 (47%), Gaps = 35/436 (8%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +++ L + + M   GL P+    N II +L   G S +A +V R M    I P  V Y T
Sbjct: 309 LKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTT 368

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++  F K G ++ A +   EM  +  SP+ +TY  LI GF + G++ + + L  +M+  G
Sbjct: 369 LIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRG 428

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           LK    +Y  +I  Y + G +V A +L  EMV  G+ P + TY  LI GLCK G +  A 
Sbjct: 429 LKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTAN 488

Query: 369 HRFFEMLRKN-----------------------------------VIPDIISYNTLLYGY 393
               EM +K                                    + PD I+Y T++  Y
Sbjct: 489 ELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAY 548

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
           CR G+I +A  L  E+  R L PTVVT+N L++G C  G LE   +L   M+ +GI+PD 
Sbjct: 549 CRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDA 608

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
           ITY  ++   C   +++   + +  M  +G+ PD   Y   I G  K  +  EA+ L +E
Sbjct: 609 ITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKE 668

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           M+ KG+ P + +YN L+    K     EA EL  +M G G + D   Y   +    E GD
Sbjct: 669 MIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGD 728

Query: 574 LRRGRDLFNNMLRKGL 589
           +    +L +  + K L
Sbjct: 729 VEITLNLCDEAIEKCL 744



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/329 (30%), Positives = 160/329 (48%), Gaps = 35/329 (10%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F++M+  GL PD      +I V    G  V A  ++  M + G+ P+IVTY  ++D  C
Sbjct: 420 LFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLC 479

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K GE+  A ELL EM+ +G   N   YN ++ G  + G +EQA  L+++M   G+   A 
Sbjct: 480 KHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAI 539

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +Y  +I  Y   G + +A  L +EM+ RG+ PT+ T+N+L+ G C  G + D       M
Sbjct: 540 TYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWM 599

Query: 375 LRKNVIPDIISYNTLLY-----------------------------------GYCRSGNI 399
           L K ++PD I+YNTL+                                    G+C++ N+
Sbjct: 600 LEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNL 659

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
            EA+ L+ E+  +  VPTV +YN LI    +      A++L E M   G++ D   Y   
Sbjct: 660 KEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFF 719

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           V+   + G++ +     +E + K L  +R
Sbjct: 720 VDMCYEEGDVEITLNLCDEAIEKCLLNER 748


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 191/606 (31%), Positives = 313/606 (51%), Gaps = 15/606 (2%)

Query: 93  LVRVLNRIREKPRIALRFFRW--VETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETV 150
           L+ VL  I+    + L FF W  V  +P ++      C I+ I + S  LR A+ +V   
Sbjct: 105 LIWVLMNIKNDYNLVLAFFDWARVRREPSLE----ARCIIIHIAVVSNDLRLAHELVHDY 160

Query: 151 -------VCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNG 203
                  + V M      LI        +    D+   +  +   + +   + +K+L  G
Sbjct: 161 FLNSKLEIGVKMTQFTHRLIYTYKYWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYG 220

Query: 204 LLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEAL 263
           L+  V +CN  +  + +N   ++     ++  E+GI  +  +YN ++ S C+ G+++EA 
Sbjct: 221 LVVTVDSCNAFLSRIANNSEGIEM--AIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAH 278

Query: 264 ELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGY 323
            LL +M  R  +P+ V+Y+ +I G+   GEL++A  L+ DM   GLK + ++YN II   
Sbjct: 279 RLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLL 338

Query: 324 SEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
            + G   EA  +  EM+++ + P    Y  LI+G  K G V  A   F EML K + PD 
Sbjct: 339 CKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDY 398

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
           I+Y TL+ G+ + G + E   LF E+ SR L P  VTY TLID  C+ G++  A  L   
Sbjct: 399 ITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNE 458

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           M+  G+ P+++TY  +++G CK G L  A E  +EM +KGLQ +   Y + + G  K G+
Sbjct: 459 MVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGN 518

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
             +A +L +EM   G  PD ITY  ++   C+LG +++A++LL++M+  G  P  +T+  
Sbjct: 519 IEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNV 578

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           +++    +G L  G  L   ML KG+ P  +TY  L+  H  R  +      +  M+ +G
Sbjct: 579 LMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQG 638

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
           + P+  TYN LI G C+ R + +A+ L+ +M E+G +P   +Y  LI          EA 
Sbjct: 639 VAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEAR 698

Query: 684 RLYKEM 689
            L++EM
Sbjct: 699 ELFEEM 704



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 137/436 (31%), Positives = 209/436 (47%), Gaps = 35/436 (8%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +++ L + + M   GL P+    N II +L   G S +A +V R M    I P  V Y T
Sbjct: 309 LKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTT 368

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++  F K G ++ A +   EM  +  SP+ +TY  LI GF + G++ + + L  +M+  G
Sbjct: 369 LIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRG 428

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           LK    +Y  +I  Y + G +V A +L  EMV  G+ P + TY  LI GLCK G +  A 
Sbjct: 429 LKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTAN 488

Query: 369 HRFFEMLRKN-----------------------------------VIPDIISYNTLLYGY 393
               EM +K                                    + PD I+Y T++  Y
Sbjct: 489 ELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAY 548

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
           CR G+I +A  L  E+  R L PTVVT+N L++G C  G LE   +L   M+ +GI+PD 
Sbjct: 549 CRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDA 608

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
           ITY  ++   C   +++   + +  M  +G+ PD   Y   I G  K  +  EA+ L +E
Sbjct: 609 ITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKE 668

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           M+ KG+ P + +YN L+    K   + EA EL  +M G G + D   Y   +    E GD
Sbjct: 669 MIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGD 728

Query: 574 LRRGRDLFNNMLRKGL 589
           +    +L +  + K L
Sbjct: 729 VEITLNLCDEAIEKCL 744



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/329 (30%), Positives = 161/329 (48%), Gaps = 35/329 (10%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F++M+  GL PD      +I V    G  V A  ++  M + G+ P+IVTY  ++D  C
Sbjct: 420 LFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLC 479

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K GE+  A ELL EM+ +G   N   YN ++ G  + G +EQA  L+++M   G+   A 
Sbjct: 480 KHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAI 539

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +Y  +I  Y   G + +A  L +EM+ RG+ PT+ T+N+L+ G C  G + D       M
Sbjct: 540 TYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWM 599

Query: 375 LRKNVIPDIISYNTLLY-----------------------------------GYCRSGNI 399
           L K ++PD I+YNTL+                                    G+C++ N+
Sbjct: 600 LEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNL 659

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
            EA+ L+ E+  +  VPTV +YN LI    +   +  A++L E M   G++ D   Y   
Sbjct: 660 KEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFF 719

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           V+   + G++ +     +E + K L  +R
Sbjct: 720 VDMCYEEGDVEITLNLCDEAIEKCLLNER 748


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 213/695 (30%), Positives = 322/695 (46%), Gaps = 87/695 (12%)

Query: 91  ELLVRVLNRIREKPRIALRFFRWVETQ--PGVKRDEFVFCTILEILIESGLLRSAYWVVE 148
            LL R  +  R  P++ L FF W  T+  P     +  F  +   L  +GL   A  +++
Sbjct: 86  SLLRRCNSSPRLHPKLLLDFFYWSRTRLAPSAPAPD-AFAHLAVSLCAAGLYPQANGLLD 144

Query: 149 T---------VVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKM 199
                     +V  ++H  L      G        +LD+L+  Y K   V     V   M
Sbjct: 145 QMIRAYPTPPLVLSSVHRALS-----GSDQGRRPVVLDVLVDTYKKTGRVRDGAEVVLLM 199

Query: 200 LRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEM 259
              GL P ++ CN ++K L          +V   M   GI P + TY+T+++++CK  ++
Sbjct: 200 KDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGAGISPDVYTYSTLIEAYCKVRDL 259

Query: 260 QEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI 319
           + A +++ EM+  GCS N VTYN LI G  R G +E+A G  ++M   GL     +Y  I
Sbjct: 260 ESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAI 319

Query: 320 I--------------------C---------------GYSEKGLLVEALNLEEEMVTRGV 344
           I                    C               G+  +G   EA  + +EM   GV
Sbjct: 320 INGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGV 379

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
            P   TY+ LI GLCK GR+  A     +M +   + D ++YN ++ G+ R  N  EAFL
Sbjct: 380 QPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFL 439

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
           L +E+R   + P V TY+ +I+GLC+ G+ E A  L E MI  G+ P+   Y  +++G C
Sbjct: 440 LLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYC 499

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
           + G+ S+A E   +M R+ L PD + Y + I G   +G   EA    +EML KGF P+  
Sbjct: 500 REGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDF 559

Query: 525 TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM 584
           TY  L+HG    G+LE+A +LL +M+  G  P+   Y  I+    +  +L +      +M
Sbjct: 560 TYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSM 619

Query: 585 LRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS--------------------------- 617
           L KGL P    Y ++IH  ++ G ++ A    S                           
Sbjct: 620 LEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADM 679

Query: 618 --------EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL 669
                   EM  KGI P +  YNALI+G C+   I  A  +F  +  +G+ PN  TYT L
Sbjct: 680 EKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTL 739

Query: 670 INENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
           I+  C AG+ ++A+ LY EML   + PD   +S L
Sbjct: 740 IDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVL 774



 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 169/578 (29%), Positives = 282/578 (48%), Gaps = 22/578 (3%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVE----TVVCVNMHGILDVLIGGGLSSCVSIK 174
           G+  D + + T++E   +   L SA  VVE    T   +N+    + LIGG         
Sbjct: 238 GISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVV-TYNTLIGG--------- 287

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
                     +   +E+      +M   GL+PD      II  L   G   +A+ +   M
Sbjct: 288 --------LCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEM 339

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
              G+ P++V Y+T++D F ++G   EA +++ EM   G  PN +TY+ LI G  + G +
Sbjct: 340 SCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRM 399

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
            +A  +++ M K+G      +YN +I G+  +    EA  L  EM   G++P + TY+I+
Sbjct: 400 GRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSII 459

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           I GLC+ G    A     +M+   + P+   Y  L+ GYCR G+   A     ++   NL
Sbjct: 460 INGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENL 519

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P +  YN+LI GL   G ++ A +  + M+ +G  P+  TY  +++G    GNL  A +
Sbjct: 520 TPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQ 579

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
             ++ML  GL P+ F Y   + G  K  +  +     + ML KG  PD   Y +++H L 
Sbjct: 580 LLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLS 639

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
             G ++ A  +L  +  +G +PD + Y S+I    +  D+ +   L + M +KG+ P + 
Sbjct: 640 SSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGIS 699

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
            Y  LI        +  A   F+ +  KG+ PN +TY  LI+G C+   I  A  L+ +M
Sbjct: 700 CYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEM 759

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
             EG+ P+ + Y++L     N+G+ Q+AL + +EM+ R
Sbjct: 760 LTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIAR 797



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 152/574 (26%), Positives = 278/574 (48%), Gaps = 15/574 (2%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G+  D F +  I+  L + G    A  +++ + C  +                ++ +   
Sbjct: 308 GLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLM--------------PNVVVYST 353

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  + ++   ++   +  +M   G+ P+    + +I+ L   G   +A  + + M + G
Sbjct: 354 LIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIG 413

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
                +TYN +++   ++   +EA  LL EM+  G SPN  TY+++I G  + GE E+A 
Sbjct: 414 YMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERAS 473

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
           GL+  M+  GLK +A  Y P+I GY  +G    A    ++M    + P L  YN LI GL
Sbjct: 474 GLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGL 533

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
              G++ +A   + EML K   P+  +Y  L++GY  +GN+ +A  L  ++ +  L P  
Sbjct: 534 SNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPND 593

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
             Y  +++G  +  +LE      ++M+ +G++PD   Y I+++     G++  A    + 
Sbjct: 594 FIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSV 653

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           + + GL PD   Y + I+G  K  D  +A  L +EM  KG  P +  YN L+ G CK   
Sbjct: 654 IEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDD 713

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           +  A  +   ++  G  P+ +TYT++I    + GD+R   DL+N ML +G++P    Y+V
Sbjct: 714 ISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSV 773

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           L    +  G L+ A     EM  +G    + ++N L++G C+  ++ +       M ++ 
Sbjct: 774 LAAGCSNSGDLQQALFITEEMIARGYAI-ISSFNTLVHGFCKRGKLQETVKFLHVMMDKD 832

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
           I+P+  T   ++     AG   EA  ++ E+  +
Sbjct: 833 IVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQK 866



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 144/489 (29%), Positives = 238/489 (48%), Gaps = 57/489 (11%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           E+  L+ N+M + G+ P+V   + II  L   G S +A  +   M   G+KP+   Y  +
Sbjct: 435 EEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPL 494

Query: 250 LDSFCKEG-----------------------------------EMQEALELLWEMQGRGC 274
           +  +C+EG                                   +M EA+E   EM  +G 
Sbjct: 495 ISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGF 554

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
            PN  TY  LI G+S  G LE+A  L+  ML  GL  +   Y  I+ GY +   L +  +
Sbjct: 555 QPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSS 614

Query: 335 LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
             + M+ +G+ P    Y I+I+ L   G +  A      + +  ++PD + Y +L+ G+C
Sbjct: 615 TLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFC 674

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
           ++ ++ +A  L DE+  + + P +  YN LIDG C+  D+  A+ +  ++I +G+ P+ +
Sbjct: 675 KAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCV 734

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
           TYT +++G CK G++  A + +NEML +G+ PD F Y+   AG    GD  +A  + EEM
Sbjct: 735 TYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEM 794

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
           +A+G+   + ++N LVHG CK G L+E  + L  M+    +P  +T  +I+    E G L
Sbjct: 795 IARGYAI-ISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKL 853

Query: 575 RRG--------------RD------LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
                            RD      LF +M+ +GL P  V +  +I +H  +G L+ A M
Sbjct: 854 SEAHTIFVELQQKNASHRDTDHLSSLFTDMINQGLVPLDVIHN-MIQSHCKQGYLDKALM 912

Query: 615 YFSEMQVKG 623
               +  KG
Sbjct: 913 LHDALVAKG 921



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 147/296 (49%), Gaps = 19/296 (6%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           ++  + V + + +NGL+PD      +I          KA  +   M + GI+P I  YN 
Sbjct: 644 MQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNA 703

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++D FCK  ++  A  +   +  +G  PN VTY  LI G+ + G++  A  L  +ML  G
Sbjct: 704 LIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEG 763

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           +   A  Y+ +  G S  G L +AL + EEM+ RG A  ++++N L++G CK G++ +  
Sbjct: 764 VAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYA-IISSFNTLVHGFCKRGKLQETV 822

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
                M+ K+++P +++   ++ G   +G + EA  +F EL+ +N               
Sbjct: 823 KFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQKN--------------- 867

Query: 429 CRYGDLEVAQQLKENMINQGILP-DVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
             + D +    L  +MINQG++P DVI    M+   CK G L  A    + ++ KG
Sbjct: 868 ASHRDTDHLSSLFTDMINQGLVPLDVIHN--MIQSHCKQGYLDKALMLHDALVAKG 921



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 122/283 (43%), Gaps = 2/283 (0%)

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
           +QG  P V+   ++V+   K G +    E    M   GL P        +   L+     
Sbjct: 168 DQGRRPVVLD--VLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALD 225

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
             ++++  M   G  PD+ TY+ L+   CK+  LE A +++ +M   G   + +TY ++I
Sbjct: 226 LLWKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLI 285

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
                 G +         M   GL P   TY  +I+    RGR + A     EM   G+ 
Sbjct: 286 GGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLM 345

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           PNV+ Y+ LI+G  R    D+A+ +  +M   G+ PNK TY  LI   C  G    A R+
Sbjct: 346 PNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRI 405

Query: 686 YKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLGA 728
            K+M       D  T++ ++   L +  K  A   L  +  G 
Sbjct: 406 LKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGG 448


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 207/680 (30%), Positives = 334/680 (49%), Gaps = 36/680 (5%)

Query: 64  STVEEKPWAFCNNRWVSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRD 123
           S + +K   F        H  +    PE    +L + +    + L+F  W    P     
Sbjct: 22  SLLADKALTFLKRHPYQLHHLSANFTPEAASNLLLKSQNDQALILKFLNWA--NPHQFFT 79

Query: 124 EFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSS----CVSIK-ILDL 178
               C  L IL +  L ++A  + E V    +      L+   L      C S   + DL
Sbjct: 80  LRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDL 139

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRI----IKVLRDNGFSVKAREVYRMM 234
           ++  Y++ S++++ L + +    +G +P V + N +    I+  R+  F   A  V++ M
Sbjct: 140 VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISF---AENVFKEM 196

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
            E  + P++ TYN ++  FC  G +  AL L  +M+ +GC PN VTYN LI G+ +  ++
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           +    L+R M   GL+ +  SYN +I G   +G + E   +  EM  RG +    TYN L
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           I G CK G    A     EMLR  + P +I+Y +L++  C++GN+  A    D++R R L
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P   TY TL+DG  + G +  A ++   M + G  P V+TY  ++NG C  G +  A  
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
              +M  KGL PD  +Y+T ++G  +  D  EA R++ EM+ KG  PD ITY+ L+ G C
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFC 496

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           +    +EA +L  +M+  G  PD  TYT++I+A    GDL +   L N M+ KG+ P +V
Sbjct: 497 EQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVV 556

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN---------------ALINGLC 639
           TY+VLI+    + R   A     ++  +   P+ +TY+               +LI G C
Sbjct: 557 TYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFC 616

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
               + +A  +F  M  +   P+   Y I+I+ +C AG+ ++A  LYKEM    ++  + 
Sbjct: 617 MKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM----VKSGFL 672

Query: 700 THSAL---LLKQLDKDYKVH 716
            H+     L+K L K+ KV+
Sbjct: 673 LHTVTVIALVKALHKEGKVN 692



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 161/529 (30%), Positives = 271/529 (51%), Gaps = 25/529 (4%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIK---VLR--DNGFSVKAREVYRMMGEFGIKPSI 243
           ++  L +F+KM   G LP+V   N +I     LR  D+GF     ++ R M   G++P++
Sbjct: 221 IDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGF-----KLLRSMALKGLEPNL 275

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           ++YN +++  C+EG M+E   +L EM  RG S + VTYN LI G+ + G   QA  +  +
Sbjct: 276 ISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAE 335

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           ML+ GL  S  +Y  +I    + G +  A+   ++M  RG+ P   TY  L+ G  + G 
Sbjct: 336 MLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           +++A     EM      P +++YN L+ G+C +G + +A  + ++++ + L P VV+Y+T
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           ++ G CR  D++ A ++K  M+ +GI PD ITY+ ++ G C+      A + + EMLR G
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           L PD F YT  I      GD  +A +L  EM+ KG  PD++TY+VL++GL K     EA 
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAK 575

Query: 544 ELLRKMVGDGFIPDHITYTSIIH--ASLEM-------------GDLRRGRDLFNNMLRKG 588
            LL K+  +  +P  +TY ++I   +++E              G +     +F +ML K 
Sbjct: 576 RLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKN 635

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
             P    Y ++IH H   G +  A+  + EM   G   + +T  AL+  L +  ++++  
Sbjct: 636 HKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELN 695

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
            + + +     L       +L+  N   GN    L +  EM      P+
Sbjct: 696 SVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/424 (30%), Positives = 209/424 (49%), Gaps = 15/424 (3%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K+    Q L++  +MLR+GL P V     +I  +   G   +A E    M   G+ P+
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPN 379

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             TY T++D F ++G M EA  +L EM   G SP+ VTYN LI G    G++E A  ++ 
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLE 439

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           DM + GL     SY+ ++ G+     + EAL ++ EMV +G+ P   TY+ LI G C+  
Sbjct: 440 DMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQR 499

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R  +A   + EMLR  + PD  +Y  L+  YC  G++ +A  L +E+  + ++P VVTY+
Sbjct: 500 RTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYS 559

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV---------------NGSCKMG 467
            LI+GL +      A++L   +  +  +P  +TY  ++                G C  G
Sbjct: 560 VLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKG 619

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
            ++ A + F  ML K  +PD  AY   I G  + GD  +AY L +EM+  GF    +T  
Sbjct: 620 MMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVI 679

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
            LV  L K G + E N ++  ++    + +      ++  +   G++    D+   M + 
Sbjct: 680 ALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKD 739

Query: 588 GLSP 591
           G  P
Sbjct: 740 GFLP 743



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 94/355 (26%), Positives = 159/355 (44%), Gaps = 50/355 (14%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           +++K  + +   V  +M  NG  P V   N +I      G    A  V   M E G+ P 
Sbjct: 390 FSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD 449

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +V+Y+T+L  FC+  ++ EAL +  EM  +G  P+ +TY+ LI GF      ++A  L  
Sbjct: 450 VVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYE 509

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL---- 358
           +ML++GL     +Y  +I  Y  +G L +AL L  EMV +GV P + TY++LI GL    
Sbjct: 510 EMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQS 569

Query: 359 ----------------------------------------------CKWGRVSDARHRFF 372
                                                         C  G +++A   F 
Sbjct: 570 RTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFE 629

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
            ML KN  PD  +YN +++G+CR+G+I +A+ L+ E+     +   VT   L+  L + G
Sbjct: 630 SMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEG 689

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
            +     +  +++    L +     ++V  + + GN+ +  +   EM + G  P+
Sbjct: 690 KVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 16/246 (6%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           E C L + +MLR GL PD      +I      G   KA +++  M E G+ P +VTY+ +
Sbjct: 503 EACDL-YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVL 561

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI---------------TGFSRNGEL 294
           ++   K+   +EA  LL ++      P+ VTY+ LI                GF   G +
Sbjct: 562 INGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMM 621

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
            +A  +   ML    K    +YN +I G+   G + +A  L +EMV  G      T   L
Sbjct: 622 TEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIAL 681

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           +  L K G+V++       +LR   + +      L+    R GN+     +  E+     
Sbjct: 682 VKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGF 741

Query: 415 VPTVVT 420
           +P  ++
Sbjct: 742 LPNGIS 747


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 201/682 (29%), Positives = 331/682 (48%), Gaps = 84/682 (12%)

Query: 104 PRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLI 163
           P++ L FF W   +      +  F  +   L  + L   A  ++  ++  + H  L VL 
Sbjct: 96  PKLLLDFFYWSRPRIAPPSAD-AFARLAASLCAASLFPQANGLLHQMILAHPHPPL-VLA 153

Query: 164 G----------GGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNR 213
                         S   S  +LD+L+  Y K   V     V   M   GL P  + CN 
Sbjct: 154 SIQRAIQDTDHRSRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNG 213

Query: 214 IIK-VLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR 272
           ++K +LR +   +  +    M G  GI P + TY+T +++ CK  +   A ++  EM+ R
Sbjct: 214 LLKDLLRADAMELLWKLKGFMEGA-GILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRR 272

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI---IC-------- 321
            C+ N VTYNV+I+G  R+G +E+A G   +M+  GL   A +Y  +   +C        
Sbjct: 273 DCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEA 332

Query: 322 ------------------------GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
                                   G+ ++G   EA ++ +EM++ GV P    Y+ LI G
Sbjct: 333 KALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRG 392

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           LCK G++  A     EM++  + PD  +YN L+ G+ +  +   AF L +E+R+  ++P 
Sbjct: 393 LCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPN 452

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           V +Y  +I+GLC+ G+ + A  L E MI++G+ P+   Y  ++ G  K GN+S+A E   
Sbjct: 453 VYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALE 512

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           +M +  + PD F Y + I G   +G   EA     ++  +G  PD  TY+ L+HG CK G
Sbjct: 513 KMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTG 572

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
           +LE+A++LLR+M+  G  P+  TYT ++    +  D  +   +  +ML  G  P    Y 
Sbjct: 573 NLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYG 632

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           ++I   +    +E+AFM  +E++  G+ P++  Y++LI+GLC++  +++A GL  +M +E
Sbjct: 633 IVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKE 692

Query: 658 -----------------------------------GILPNKYTYTILINENCNAGNWQEA 682
                                              G++PN  TYT LI+ NC  G+  +A
Sbjct: 693 GLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDA 752

Query: 683 LRLYKEMLDREIEPDYCTHSAL 704
             LYKEMLDR I PD   ++ L
Sbjct: 753 FDLYKEMLDRGIAPDAFVYNVL 774



 Score =  290 bits (743), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 159/508 (31%), Positives = 271/508 (53%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           +   VE+      +M+  GL PD      ++  L       +A+ +   M   G+KP+IV
Sbjct: 290 RSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIV 349

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
            Y T++D F KEG+  EA ++L EM   G  PN + Y+ LI G  + G+L +A  L+++M
Sbjct: 350 VYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEM 409

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           +K+GL+    +YNP++ G+ ++     A  L  EM   G+ P + +Y I+I GLC+ G  
Sbjct: 410 IKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGES 469

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            +A +   EM+ + + P+   Y  L+ G+ + GNI  A    +++   N+ P +  YN+L
Sbjct: 470 KEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSL 529

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           I GL   G +E A++    +  +G++PD  TY+ +++G CK GNL  A +   +ML  GL
Sbjct: 530 IKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGL 589

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
           +P+   YT  + G  K  D  +   + + ML  G  PD   Y +++  L +  ++E A  
Sbjct: 590 KPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFM 649

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           +L ++  +G +PD   Y+S+I    ++ D+ +   L + M ++GL P +V Y  LI    
Sbjct: 650 VLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFC 709

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
             G +  A   F  +  KG+ PN +TY ALI+G C+   I  A+ L+ +M + GI P+ +
Sbjct: 710 RSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAF 769

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDR 692
            Y +L     +A + ++AL L +EM +R
Sbjct: 770 VYNVLATGCSDAADLEQALFLTEEMFNR 797



 Score =  275 bits (704), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 160/591 (27%), Positives = 296/591 (50%), Gaps = 15/591 (2%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G+  D F +  ++  L +   L+ A  +++ + C  +                +I +   
Sbjct: 308 GLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLK--------------PNIVVYGT 353

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  + K+    +   +  +M+  G+ P+    + +I+ L   G   +A ++ + M + G
Sbjct: 354 LVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVG 413

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           ++P   TYN ++    ++ +   A ELL EM+  G  PN  +Y ++I G  +NGE ++A 
Sbjct: 414 LRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAG 473

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L+ +M+  GLK +A  Y P+I G+S++G +  A    E+M    V P L  YN LI GL
Sbjct: 474 NLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGL 533

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
              GR+ +A   + ++ ++ ++PD  +Y+ L++GYC++GN+ +A  L  ++ +  L P  
Sbjct: 534 STVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNA 593

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
            TY  L++G  +  D E    + ++M+  G  PD   Y I++    +  N+ +A     E
Sbjct: 594 DTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTE 653

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           + + GL PD   Y++ I+G  K+ D  +A  L +EM  +G  P ++ YN L+ G C+ G 
Sbjct: 654 VEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGD 713

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           +  A  +   ++  G +P+ +TYT++I  + + GD+    DL+  ML +G++P    Y V
Sbjct: 714 ISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNV 773

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           L    +    LE A     EM  +G   NV  +N L++G C+  ++ +   L   M +  
Sbjct: 774 LATGCSDAADLEQALFLTEEMFNRGY-ANVSLFNTLVHGFCKRGKLQETEKLLHVMMDRE 832

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQL 709
           I+PN  T   +++E   AG   EA R++ E+  ++         +LL   +
Sbjct: 833 IVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKKASQSATDRFSLLFTDM 883



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 122/443 (27%), Positives = 204/443 (46%), Gaps = 12/443 (2%)

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
           L+  +  + R   P+   +  L           QA GL+  M      + AH + P++  
Sbjct: 100 LDFFYWSRPRIAPPSADAFARLAASLCAASLFPQANGLLHQM------ILAHPHPPLVLA 153

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
             ++ +       + +  +R  +P+ A  ++L+    K G V +A      M    + P 
Sbjct: 154 SIQRAIQ------DTDHRSRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPT 207

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
               N LL    R+  +   + L   +    ++P V TY+T I+  C+  D + A+++ E
Sbjct: 208 RRCCNGLLKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFE 267

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            M  +    + +TY +M++G C+ G +  A  F  EM+  GL PD F Y   + G  K  
Sbjct: 268 EMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGS 327

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
              EA  L +EM   G  P+++ Y  LV G  K G   EA ++L++M+  G  P+ I Y 
Sbjct: 328 RLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYD 387

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
           ++I    ++G L R   L   M++ GL P   TY  L+  H  +   + AF   +EM+  
Sbjct: 388 NLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNS 447

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
           GI PNV +Y  +INGLC+     +A  L  +M  EG+ PN + Y  LI  +   GN   A
Sbjct: 448 GILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLA 507

Query: 683 LRLYKEMLDREIEPDYCTHSALL 705
               ++M    + PD   +++L+
Sbjct: 508 CEALEKMTKANVHPDLFCYNSLI 530



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 120/414 (28%), Positives = 190/414 (45%), Gaps = 12/414 (2%)

Query: 312 SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRF 371
           SA ++  +        L  +A  L  +M+     P L   +I          + D  HR 
Sbjct: 114 SADAFARLAASLCAASLFPQANGLLHQMILAHPHPPLVLASI-------QRAIQDTDHR- 165

Query: 372 FEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY 431
                ++  P     + L+  Y ++G++  A  +   +    L PT    N L+  L R 
Sbjct: 166 ----SRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRA 221

Query: 432 GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAY 491
             +E+  +LK  M   GILPDV TY+  +   CK  +   A++ F EM R+    +   Y
Sbjct: 222 DAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTY 281

Query: 492 TTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
              I+G  + G   EA+  +EEM+  G  PD  TY  L++GLCK   L+EA  LL +M  
Sbjct: 282 NVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSC 341

Query: 552 DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLEL 611
            G  P+ + Y +++   ++ G      D+   M+  G+ P  + Y  LI      G+L  
Sbjct: 342 SGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGR 401

Query: 612 AFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
           A     EM   G+RP+  TYN L+ G  +    D A+ L  +M   GILPN Y+Y I+IN
Sbjct: 402 ASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMIN 461

Query: 672 ENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
             C  G  +EA  L +EM+   ++P+   ++ L++    +     A E LE +T
Sbjct: 462 GLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMT 515


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 169/516 (32%), Positives = 277/516 (53%), Gaps = 6/516 (1%)

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
           N +++VL       +A +++R       +P + +YN ++  FC  G++  ALELL EM+ 
Sbjct: 81  NSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKS 140

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
            G +P+  T+  +IT  +  G+L+ A   +R M   G   +  +Y  +I  ++    L E
Sbjct: 141 AGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAFARAKKLEE 197

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
           A+ L EEM  RG  P L TYN+L+  LCK   V  A+    +M+     P+++++N+L+ 
Sbjct: 198 AMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVD 257

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
           G+C+ GN+ +A  L   + ++ + P VVTY+ LIDGLC+      A+++ E M  +G+ P
Sbjct: 258 GFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTP 317

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           D  TY+ +++G CK   +  A +    M   G  PD   Y++ I    K G   EA +  
Sbjct: 318 DAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTL 377

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG-FIPDHITYTSIIHASLE 570
           +EM  +   PD++TYN ++ GLCKLG + EA  +L +M   G  +PD +TY+++I+   +
Sbjct: 378 QEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCK 437

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
              L   + L + M + G +P +VTYT +I      GRLE A      M+  G  PNV+T
Sbjct: 438 SDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVT 497

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           Y  LI+GLC+ R++D+A  +  +M   G  PN  TY  ++N  C +G  +EA +L + M 
Sbjct: 498 YTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMK 557

Query: 691 D--REIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           D   E  PD  T+  ++   +  D    A + LE +
Sbjct: 558 DGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 593



 Score =  294 bits (752), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 187/625 (29%), Positives = 303/625 (48%), Gaps = 59/625 (9%)

Query: 69  KPWAFCNNRWVSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQ-PGVKRDEFVF 127
           +PW+          F    + P ++ RV+N +++  ++AL FFRW     PG     F +
Sbjct: 24  RPWSAIEPDL--SPFSGASTTPRIVGRVVNSLKDA-KLALAFFRWAPASIPGFSHTAFSW 80

Query: 128 CTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKS 187
            ++L++L+     R A                D+     L+SC                 
Sbjct: 81  NSLLQVLVRCKKHREAG---------------DLFRSELLASCE---------------- 109

Query: 188 MVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
                             PDV + N +I    + G    A E+   M   G  P   T+ 
Sbjct: 110 ------------------PDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHT 151

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
            ++ +    G++  A++ L  M   GC PN VTY  LI  F+R  +LE+A  L+ +M + 
Sbjct: 152 PIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRER 208

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           G   +  +YN ++    +  ++  A ++ ++M+  G AP + T+N L+ G CK G V DA
Sbjct: 209 GCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDA 268

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
           R     M+ K + P++++Y+ L+ G C+S    EA  + +E+++R + P   TY+ LI G
Sbjct: 269 RKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHG 328

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           LC+   +E A+Q+   M   G  PDV+ Y+ +++  CK G L  A++   EM ++   PD
Sbjct: 329 LCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPD 388

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKG-FPPDLITYNVLVHGLCKLGSLEEANELL 546
              Y T I G  KLG  +EA  + E+M   G   PD++TY+ +++GLCK   L EA +LL
Sbjct: 389 VVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLL 448

Query: 547 RKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAAR 606
            +M   G  PD +TYT+II    + G L     L   M R G +P +VTYT LI      
Sbjct: 449 DRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKA 508

Query: 607 GRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE--EGILPNKY 664
            +++ A     EM+  G  PN++TYN ++NGLC   RI +A  L   M++      P+  
Sbjct: 509 RKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAA 568

Query: 665 TYTILINENCNAGNWQEALRLYKEM 689
           TY  ++N   ++   QEA +L ++M
Sbjct: 569 TYRTIVNALMSSDLVQEAEQLLEQM 593



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 151/448 (33%), Positives = 230/448 (51%), Gaps = 5/448 (1%)

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA 332
           G S    ++N L+    R  +  +A  L R  L    +    SYN +I G+   G L  A
Sbjct: 72  GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAA 131

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
           L L EEM + G AP   T+  +I  +   G +  A      M      P++++Y  L+  
Sbjct: 132 LELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAA 188

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
           + R+  + EA  L +E+R R   P +VTYN L+D LC+   +  AQ + + MI  G  P+
Sbjct: 189 FARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPN 248

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
           V+T+  +V+G CK GN+  AR+    M+ KG++P+   Y+  I G  K     EA  + E
Sbjct: 249 VMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLE 308

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           EM  +G  PD  TY+ L+HGLCK   +EEA ++LR+M G G  PD + Y+SIIHA  + G
Sbjct: 309 EMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSG 368

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG-IRPNVITY 631
            L   +     M ++  SP +VTY  +I      G++  A +   +MQ  G + P+V+TY
Sbjct: 369 KLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTY 428

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           + +INGLC+   + +A  L   M + G  P+  TYT +I+  C  G  +EA  L + M  
Sbjct: 429 STVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKR 488

Query: 692 REIEPDYCTHSALLLKQLDKDYKVHAVE 719
               P+  T++  L+  L K  KV   E
Sbjct: 489 AGCAPNVVTYTT-LISGLCKARKVDEAE 515



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/296 (27%), Positives = 137/296 (46%), Gaps = 17/296 (5%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           GV  D F +  ++  L ++  +  A              +L  + G G +    + +   
Sbjct: 314 GVTPDAFTYSALIHGLCKADKIEEA------------EQMLRRMAGSGCTP--DVVVYSS 359

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           ++  + K   + +      +M +    PDV   N +I  L   G   +A+ +   M E G
Sbjct: 360 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESG 419

Query: 239 -IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
            + P +VTY+T+++  CK   + EA +LL  M   GC+P+ VTY  +I G  + G LE+A
Sbjct: 420 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 479

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L++ M + G   +  +Y  +I G  +   + EA  + EEM   G  P L TYN ++ G
Sbjct: 480 EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 539

Query: 358 LCKWGRVSDARHRFFEML--RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           LC  GR+ +A+     M   R    PD  +Y T++     S  + EA  L ++++S
Sbjct: 540 LCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMKS 595



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 57/118 (48%)

Query: 607 GRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
            +L LAF  ++   + G      ++N+L+  L R ++  +A  LF         P+  +Y
Sbjct: 56  AKLALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSY 115

Query: 667 TILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
            I+I+  CNAG+   AL L +EM      PD  TH+ ++    +      A+++L S+
Sbjct: 116 NIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM 173


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 173/538 (32%), Positives = 292/538 (54%), Gaps = 17/538 (3%)

Query: 203 GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           G  P V   N ++  L D      AR     M   G+ P++ TYN ++ + C  G ++EA
Sbjct: 113 GYAPSVPAYNAVLLALSDASLP-SARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG-LKVSAHSYNPIIC 321
           + ++ +M+G GC+PN VTYN L+  F R GEL+ A  ++  M + G  K +  ++N ++ 
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           G  + G +  A  + +EMV  G+AP + +YN L+ G CK G + ++   F EM ++ ++P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           D++++ +L++  C++GN+ +A  L  ++R R L    VT+  LIDG C+ G L+ A    
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
           E M   GI P V+ Y  ++NG CK+G + +ARE   EM  K ++PD   Y+T I+G  K+
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 411

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
           G+   A++L ++ML KG  PD ITY+ L+ GLC+   L +A EL   M+  G  PD  TY
Sbjct: 412 GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTY 471

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
           T++I    + G++ +   L + M+RKG+ P +VTY+VLI+  +   R + A     ++  
Sbjct: 472 TTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYH 531

Query: 622 KGIRPNVITYN---------------ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
           +   P+ I Y+               AL+ G C    + +A  ++  M +     +   Y
Sbjct: 532 EDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVY 591

Query: 667 TILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           +ILI+ +C  GN ++AL  +K+ML     P+  +  +L+    ++   V A   ++ L
Sbjct: 592 SILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDL 649



 Score =  271 bits (694), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 166/534 (31%), Positives = 267/534 (50%), Gaps = 51/534 (9%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
            + MLR+G+ P+V   N +++ L   G   +A  V   M   G  P+ VTYNT++ +FC+
Sbjct: 140 LSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCR 199

Query: 256 EGEMQEALELLWEMQGRG-CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
            GE+  A  ++  M+  G   PN VT+N ++ G  + G +E AR +  +M++ GL     
Sbjct: 200 AGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVV 259

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY------------------ 356
           SYN ++ GY + G L E+L +  EM  RG+ P + T+  LI+                  
Sbjct: 260 SYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQM 319

Query: 357 -----------------GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
                            G CK G + DA     EM +  + P ++ YN L+ GYC+ G +
Sbjct: 320 RERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRM 379

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
             A  L  E+ ++ + P VVTY+T+I G C+ G+L+ A QL + M+ +G+LPD ITY+ +
Sbjct: 380 DLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSL 439

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           + G C+   L+ A E F  ML+ G+QPD F YTT I G  K G+  +A  L +EM+ KG 
Sbjct: 440 IRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGV 499

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM-------- 571
            PD++TY+VL++GL K    +EA+ LL K+  +  +PD+I Y +++    +         
Sbjct: 500 LPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVAL 559

Query: 572 -------GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
                  G ++    ++ +ML +        Y++LIH H   G +  A  +  +M   G 
Sbjct: 560 LKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGF 619

Query: 625 RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGN 678
            PN  +  +L+ GL     + +A     D+     L +      LI+ N   GN
Sbjct: 620 SPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGN 673



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 137/450 (30%), Positives = 232/450 (51%), Gaps = 17/450 (3%)

Query: 158 ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
           + D ++  GL+    +   + LL  Y K   + + L VF++M + GL+PDV     +I  
Sbjct: 245 VFDEMVREGLAP--DVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHA 302

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
               G   +A  +   M E G++ + VT+  ++D FCK+G + +AL  + EM+  G  P+
Sbjct: 303 TCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPS 362

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
            V YN LI G+ + G ++ AR LIR+M    +K    +Y+ II GY + G L  A  L +
Sbjct: 363 VVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQ 422

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
           +M+ +GV P   TY+ LI GLC+  R++DA   F  ML+  V PD  +Y TL+ G+C+ G
Sbjct: 423 KMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEG 482

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY- 456
           N+ +A  L DE+  + ++P VVTY+ LI+GL +    + A +L   + ++  +PD I Y 
Sbjct: 483 NVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYD 542

Query: 457 --------------TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
                           ++ G C  G +  A + +  ML +  + D   Y+  I G  + G
Sbjct: 543 ALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGG 602

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
           +  +A    ++ML  GF P+  +   LV GL + G + EA+  ++ ++    + D     
Sbjct: 603 NVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASK 662

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           ++I  + + G++    D+   M R GL P+
Sbjct: 663 ALIDLNRKEGNVDALIDVLCGMARDGLLPS 692



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 115/351 (32%), Positives = 187/351 (53%), Gaps = 3/351 (0%)

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           P + +YN +L       ++  A      +    + P V TYN L+  LC  G LE A  +
Sbjct: 116 PSVPAYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGV 174

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG-LQPDRFAYTTQIAGEL 499
             +M   G  P+ +TY  +V   C+ G L  A    + M  +G  +P+   + + + G  
Sbjct: 175 VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLC 234

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           K G    A ++ +EM+ +G  PD+++YN L+ G CK+G L E+  +  +M   G +PD +
Sbjct: 235 KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVV 294

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
           T+TS+IHA+ + G+L +   L   M  +GL    VT+T LI     +G L+ A +   EM
Sbjct: 295 TFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 354

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
           +  GI+P+V+ YNALING C+L R+D A  L  +ME + + P+  TY+ +I+  C  GN 
Sbjct: 355 RKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNL 414

Query: 680 QEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLES-LTLGAE 729
             A +L ++ML + + PD  T+S+L+    ++     A E  E+ L LG +
Sbjct: 415 DSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQ 465



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 104/447 (23%), Positives = 185/447 (41%), Gaps = 87/447 (19%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVE---------TVVCVNMHGILDVLIGGGLSS 169
           G++ +E  F  +++   + G L  A   VE         +VVC N       LI G    
Sbjct: 323 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYN------ALING---- 372

Query: 170 CVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE 229
                        Y K   ++    +  +M    + PDV   + II      G    A +
Sbjct: 373 -------------YCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQ 419

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           + + M + G+ P  +TY++++   C+E  + +A EL   M   G  P+  TY  LI G  
Sbjct: 420 LNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHC 479

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           + G +E+A  L  +M++                                   +GV P + 
Sbjct: 480 KEGNVEKALSLHDEMIR-----------------------------------KGVLPDVV 504

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           TY++LI GL K  R  +A    F++  ++ +PD I Y+ L+    ++           E 
Sbjct: 505 TYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKA-----------EF 553

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
           +S      VV    L+ G C  G ++ A ++ ++M+++    D   Y+I+++G C+ GN+
Sbjct: 554 KS------VV---ALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNV 604

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A  F  +MLR G  P+  +  + + G  + G   EA    +++L      D      L
Sbjct: 605 RKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKAL 664

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIP 556
           +    K G+++   ++L  M  DG +P
Sbjct: 665 IDLNRKEGNVDALIDVLCGMARDGLLP 691



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 101/245 (41%), Gaps = 74/245 (30%)

Query: 117 QPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKIL 176
           Q GV+ DEF + T                                LI G           
Sbjct: 461 QLGVQPDEFTYTT--------------------------------LIDG----------- 477

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR--EVYRMM 234
                 + K+  VE+ L + ++M+R G+LPDV   + +I     NG S  AR  E +R++
Sbjct: 478 ------HCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLI-----NGLSKSARTKEAHRLL 526

Query: 235 GEF---GIKPSIVTYN---------------TMLDSFCKEGEMQEALELLWEMQGRGCSP 276
            +       P  + Y+                +L  FC +G M+EA ++   M  R    
Sbjct: 527 FKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKL 586

Query: 277 NGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLE 336
           +G  Y++LI G  R G + +A    + ML+ G   ++ S   ++ G  E+G++VEA N  
Sbjct: 587 DGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAI 646

Query: 337 EEMVT 341
           ++++T
Sbjct: 647 QDLLT 651



 Score = 44.3 bits (103), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 1/110 (0%)

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           +  LI ++A+  R  LA    +     G  P+V  YNA++  L     +  A      M 
Sbjct: 86  FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLALSDA-SLPSARRFLSSML 144

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             G+ PN YTY IL+   C  G  +EA+ +  +M      P+  T++ L+
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLV 194


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 173/538 (32%), Positives = 292/538 (54%), Gaps = 17/538 (3%)

Query: 203 GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           G  P V   N ++  L D      AR     M   G+ P++ TYN ++ + C  G ++EA
Sbjct: 113 GYAPSVPAYNAVLLALSDASLP-SARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG-LKVSAHSYNPIIC 321
           + ++ +M+G GC+PN VTYN L+  F R GEL+ A  ++  M + G  K +  ++N ++ 
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           G  + G +  A  + +EMV  G+AP + +YN L+ G CK G + ++   F EM ++ ++P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           D++++ +L++  C++GN+ +A  L  ++R R L    VT+  LIDG C+ G L+ A    
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
           E M   GI P V+ Y  ++NG CK+G + +ARE   EM  K ++PD   Y+T I+G  K+
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 411

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
           G+   A++L ++ML KG  PD ITY+ L+ GLC+   L +A EL   M+  G  PD  TY
Sbjct: 412 GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTY 471

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
           T++I    + G++ +   L + M+RKG+ P +VTY+VLI+  +   R + A     ++  
Sbjct: 472 TTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYH 531

Query: 622 KGIRPNVITYN---------------ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
           +   P+ I Y+               AL+ G C    + +A  ++  M +     +   Y
Sbjct: 532 EDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVY 591

Query: 667 TILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           +ILI+ +C  GN ++AL  +K+ML     P+  +  +L+    ++   V A   ++ L
Sbjct: 592 SILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDL 649



 Score =  271 bits (694), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 158/494 (31%), Positives = 254/494 (51%), Gaps = 51/494 (10%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
            + MLR+G+ P+V   N +++ L   G   +A  V   M   G  P+ VTYNT++ +FC+
Sbjct: 140 LSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCR 199

Query: 256 EGEMQEALELLWEMQGRG-CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
            GE+  A  ++  M+  G   PN VT+N ++ G  + G +E AR +  +M++ GL     
Sbjct: 200 AGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVV 259

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY------------------ 356
           SYN ++ GY + G L E+L +  EM  RG+ P + T+  LI+                  
Sbjct: 260 SYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQM 319

Query: 357 -----------------GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
                            G CK G + DA     EM +  + P ++ YN L+ GYC+ G +
Sbjct: 320 RERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRM 379

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
             A  L  E+ ++ + P VVTY+T+I G C+ G+L+ A QL + M+ +G+LPD ITY+ +
Sbjct: 380 DLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSL 439

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           + G C+   L+ A E F  ML+ G+QPD F YTT I G  K G+  +A  L +EM+ KG 
Sbjct: 440 IRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGV 499

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM-------- 571
            PD++TY+VL++GL K    +EA+ LL K+  +  +PD+I Y +++    +         
Sbjct: 500 LPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVAL 559

Query: 572 -------GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
                  G ++    ++ +ML +        Y++LIH H   G +  A  +  +M   G 
Sbjct: 560 LKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGF 619

Query: 625 RPNVITYNALINGL 638
            PN  +  +L+ GL
Sbjct: 620 SPNSTSTISLVRGL 633



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 115/351 (32%), Positives = 187/351 (53%), Gaps = 3/351 (0%)

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           P + +YN +L       ++  A      +    + P V TYN L+  LC  G LE A  +
Sbjct: 116 PSVPAYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGV 174

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG-LQPDRFAYTTQIAGEL 499
             +M   G  P+ +TY  +V   C+ G L  A    + M  +G  +P+   + + + G  
Sbjct: 175 VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLC 234

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           K G    A ++ +EM+ +G  PD+++YN L+ G CK+G L E+  +  +M   G +PD +
Sbjct: 235 KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVV 294

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
           T+TS+IHA+ + G+L +   L   M  +GL    VT+T LI     +G L+ A +   EM
Sbjct: 295 TFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 354

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
           +  GI+P+V+ YNALING C+L R+D A  L  +ME + + P+  TY+ +I+  C  GN 
Sbjct: 355 RKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNL 414

Query: 680 QEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLES-LTLGAE 729
             A +L ++ML + + PD  T+S+L+    ++     A E  E+ L LG +
Sbjct: 415 DSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQ 465



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 121/408 (29%), Positives = 202/408 (49%), Gaps = 52/408 (12%)

Query: 158 ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
           + D ++  GL+    +   + LL  Y K   + + L VF++M + GL+PDV     +I  
Sbjct: 245 VFDEMVREGLAP--DVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHA 302

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
               G   +A  +   M E G++ + VT+  ++D FCK+G + +AL  + EM+  G  P+
Sbjct: 303 TCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPS 362

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
            V YN LI G+ + G ++ AR LIR+M    +K    +Y+ II GY + G L  A  L +
Sbjct: 363 VVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQ 422

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
           +M+ +GV P   TY+ LI GLC+  R++DA   F  ML+  V PD  +Y TL+ G+C+ G
Sbjct: 423 KMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEG 482

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGL----------------------------- 428
           N+ +A  L DE+  + ++P VVTY+ LI+GL                             
Sbjct: 483 NVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYD 542

Query: 429 ---------------------CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG 467
                                C  G ++ A ++ ++M+++    D   Y+I+++G C+ G
Sbjct: 543 ALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGG 602

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML 515
           N+  A  F  +MLR G  P+  +  + + G  + G   EA    +++L
Sbjct: 603 NVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLL 650



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 101/245 (41%), Gaps = 74/245 (30%)

Query: 117 QPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKIL 176
           Q GV+ DEF + T                                LI G           
Sbjct: 461 QLGVQPDEFTYTT--------------------------------LIDG----------- 477

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR--EVYRMM 234
                 + K+  VE+ L + ++M+R G+LPDV   + +I     NG S  AR  E +R++
Sbjct: 478 ------HCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLI-----NGLSKSARTKEAHRLL 526

Query: 235 GEF---GIKPSIVTYN---------------TMLDSFCKEGEMQEALELLWEMQGRGCSP 276
            +       P  + Y+                +L  FC +G M+EA ++   M  R    
Sbjct: 527 FKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKL 586

Query: 277 NGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLE 336
           +G  Y++LI G  R G + +A    + ML+ G   ++ S   ++ G  E+G++VEA N  
Sbjct: 587 DGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAI 646

Query: 337 EEMVT 341
           ++++T
Sbjct: 647 QDLLT 651



 Score = 44.3 bits (103), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 1/110 (0%)

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           +  LI ++A+  R  LA    +     G  P+V  YNA++  L     +  A      M 
Sbjct: 86  FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLALSDA-SLPSARRFLSSML 144

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             G+ PN YTY IL+   C  G  +EA+ +  +M      P+  T++ L+
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLV 194


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 192/618 (31%), Positives = 314/618 (50%), Gaps = 12/618 (1%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVC----VNMHG--ILDVLIGGGLSSCVS 172
           G  R    F T++ +L  +G+    Y ++  +VC    VN+    +  +L+     +  S
Sbjct: 119 GFSRSIDAFRTVVNVLALAGMHMEVYALLRDIVCYYNKVNLDAFELFPILLESPKDAARS 178

Query: 173 IKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR 232
           + + DLL+ ++   SM+E  + VF +  + GL    ++CN ++K L +       R ++ 
Sbjct: 179 VIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFE 238

Query: 233 MMGEFGIKPSIVTYNTMLDSFCK------EGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
            M   G  P++ TY  M++ +CK      + + ++A E+L EM+  G SP  VTY+  I 
Sbjct: 239 EMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIY 298

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G  R G +E A   +R ++     V+ + YN II G  +KG L EAL + EEM + G++P
Sbjct: 299 GLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISP 358

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
            + TY+ILI+G CK G V    +   EM   N+ P ++SY++L +G C+      +  +F
Sbjct: 359 DVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIF 418

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
            +L +         Y+ LI G C  GDL+ A +L E M+   + PD   +  +V+G CKM
Sbjct: 419 RDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKM 478

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G    A EFFN ML  G+ P        I    + G   EA  L  EM  +G  P+L TY
Sbjct: 479 GLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTY 538

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           N +++ LCK    E A EL   M+    +P  + Y+++I    +  + ++   L+  ML+
Sbjct: 539 NAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLK 598

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
            G++P +V YT+LI+    R R+  A+  F +M   G+ P+ I+Y ++I G CR+  + +
Sbjct: 599 IGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRK 658

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
           A+ LF +M + G LP   TYT L++  C       A  L  EM  + I PD  T++ L+ 
Sbjct: 659 AWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIA 718

Query: 707 KQLDKDYKVHAVEYLESL 724
               +     A+E L  +
Sbjct: 719 AHRRRGNLDKALEMLNEM 736



 Score =  290 bits (743), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 164/479 (34%), Positives = 259/479 (54%)

Query: 191 QCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTML 250
           Q   +  +M RNG  P V   +  I  L   G+   A +  R +       ++  YN ++
Sbjct: 273 QATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAII 332

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
              CK+GE+ EAL++L EM+  G SP+  TY++LI GF + G++E+   LI +M    ++
Sbjct: 333 HGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNME 392

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
            S  SY+ +  G  +K L   +L++  ++   G       Y+ILI G C  G +  A   
Sbjct: 393 PSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKL 452

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
             EM+R N+ PD  ++ +L++G+C+ G    A   F+ +    ++P++ T N +ID  CR
Sbjct: 453 MEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCR 512

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
            G +E A  L   M  QGI P++ TY  ++N  CK      A E F  ML++ + P    
Sbjct: 513 EGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVV 572

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           Y+T I G  K  ++ +A  L   ML  G  PD++ Y +L++ LC    + EA  L +KM 
Sbjct: 573 YSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMT 632

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
            +G  PD I+YTS+I     +GD+R+   LFN ML++G  PT+VTYT L+  +    R++
Sbjct: 633 ENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRID 692

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL 669
           +A M   EM+ KGI P+V+TYN LI    R   +D+A  +  +M+E G+LP+  TY +L
Sbjct: 693 IADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTYMML 751



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 127/415 (30%), Positives = 222/415 (53%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           KK  +++ L V  +M   G+ PDV   + +I      G   K   +   M    ++PS+V
Sbjct: 337 KKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLV 396

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           +Y+++    CK+     +L++  ++   G   +   Y++LI GF   G+L+ A  L+ +M
Sbjct: 397 SYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEM 456

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           ++  L     ++  ++ G+ + GL V AL     M+  G+ P++AT N++I   C+ GRV
Sbjct: 457 VRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRV 516

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            +A +   EM  + + P++ +YN ++   C+      A  LF  +  RN++P+VV Y+TL
Sbjct: 517 EEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTL 576

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           IDG  +  + + A  L   M+  G+ PD++ YTI++N  C    +  A   F +M   G+
Sbjct: 577 IDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGM 636

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            PD+ +YT+ IAG  ++GD  +A+ L  EML +G  P ++TY  LV G CK+  ++ A+ 
Sbjct: 637 TPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADM 696

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           L+ +M   G  PD +TY  +I A    G+L +  ++ N M   G+ P  +TY +L
Sbjct: 697 LIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTYMML 751



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 122/379 (32%), Positives = 205/379 (54%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K+  VE+ L +  +M  + + P + + + +   L     S  + +++R +G  G K  
Sbjct: 370 FCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYD 429

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
              Y+ ++  FC +G++  A +L+ EM     +P+   +  L+ GF + G    A     
Sbjct: 430 QTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFN 489

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            ML+ G+  S  + N II  +  +G + EALNL  EM T+G+ P L TYN +I  LCK  
Sbjct: 490 MMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKER 549

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           +   A   F  ML++NV+P ++ Y+TL+ G+ +  N  +A +L+  +    + P +V Y 
Sbjct: 550 KSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYT 609

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            LI+ LC    +  A  L + M   G+ PD I+YT ++ G C++G++  A   FNEML++
Sbjct: 610 ILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQR 669

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G  P    YT+ + G  K+     A  L +EM  KG  PD++TYNVL+    + G+L++A
Sbjct: 670 GHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKA 729

Query: 543 NELLRKMVGDGFIPDHITY 561
            E+L +M  +G +PDH+TY
Sbjct: 730 LEMLNEMKENGVLPDHMTY 748



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 109/357 (30%), Positives = 177/357 (49%), Gaps = 21/357 (5%)

Query: 106 IALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMH---GILDVL 162
           I+L  FR +    G K D+  +  +++     G L SA+ ++E +V  N+       + L
Sbjct: 413 ISLDIFRDLGA-AGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESL 471

Query: 163 IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG 222
           + G                 + K  +    L  FN ML  G+LP +  CN II      G
Sbjct: 472 VHG-----------------FCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREG 514

Query: 223 FSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYN 282
              +A  +   M   GI P++ TYN +++  CKE + + ALEL   M  R   P+ V Y+
Sbjct: 515 RVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYS 574

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
            LI GF++    ++A  L   MLK+G+     +Y  +I     +  + EA NL ++M   
Sbjct: 575 TLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTEN 634

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           G+ P   +Y  +I G C+ G +  A   F EML++  +P +++Y +L+ GYC+   I  A
Sbjct: 635 GMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIA 694

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
            +L DE++ + + P VVTYN LI    R G+L+ A ++   M   G+LPD +TY ++
Sbjct: 695 DMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTYMML 751


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  312 bits (800), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 178/563 (31%), Positives = 285/563 (50%), Gaps = 12/563 (2%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
            ++L+  +   S +   L  F K+ + GL PDV     ++  L       +A + +  M 
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMF 176

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
           E   +P++VT+ T+++  C+EG + EA+ LL  M   G  P  +TY  ++ G  + G+  
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236

Query: 296 QARGLIRDMLKLGLKV-SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
            A  L+R M ++   + +   Y+ II    + G   +A NL  EM  +G+ P L TYN +
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           I G C  GR SDA     EML + + PD+++YN L+  + + G   EA  L+DE+  R +
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGI 356

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
           +P  +TYN++IDG C+   L+ A+ +   M  +G  PDV T+T +++G C    +    E
Sbjct: 357 IPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGME 416

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
             +EM R+GL  +   Y T I G   +GD + A  L ++M++ G  PD++T N L+ GLC
Sbjct: 417 LLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLC 476

Query: 535 KLGSLEEANELLRKMVG-----------DGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
             G L++A E+ + M             +G  PD +TY  +I   +  G      +L+  
Sbjct: 477 DNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEE 536

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           M  +G+ P  +TY+ +I     + RL+ A   F  M  K   PNV+T+N LING C+  R
Sbjct: 537 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGR 596

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSA 703
           +D    LF +M   GI+ +   Y  LI      GN   AL +++EM+   + PD  T   
Sbjct: 597 VDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRN 656

Query: 704 LLLKQLDKDYKVHAVEYLESLTL 726
           +L     K+    AV  LE L +
Sbjct: 657 MLTGFWSKEELERAVAMLEDLQM 679



 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 164/564 (29%), Positives = 271/564 (48%), Gaps = 47/564 (8%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +E  + +F+ MLR+  LP V +  +++ V+           +Y+ M    I+  I ++N 
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++  FC   ++  AL    ++   G  P+ VT+  L+ G      + +A      M +  
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG----------- 357
            + +  ++  ++ G   +G +VEA+ L + M+  G+ PT  TY  ++ G           
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 358 -------------------------LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
                                    LCK GR SDA++ F EM  K + PD+ +YN+++ G
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
           +C SG   +A  L  E+  R + P VVTYN LI+   + G    A +L + M+ +GI+P+
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 359

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
            ITY  M++G CK   L  A + F  M  KG  PD F +TT I G        +   L  
Sbjct: 360 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 419

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           EM  +G   + +TYN L+HG C +G L  A +L ++M+  G  PD +T  +++    + G
Sbjct: 420 EMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 479

Query: 573 DLRRGRDLFNNMLRK-----------GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
            L+   ++F  M +            G+ P ++TY +LI      G+   A   + EM  
Sbjct: 480 KLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPH 539

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
           +GI P+ ITY+++I+GLC+  R+D+A  +F+ M  +   PN  T+  LIN  C AG   +
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDD 599

Query: 682 ALRLYKEMLDREIEPDYCTHSALL 705
            L L+ EM  R I  D   +  L+
Sbjct: 600 GLELFCEMGRRGIVADAIIYITLI 623



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 149/478 (31%), Positives = 243/478 (50%), Gaps = 12/478 (2%)

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           +++A++L  +M      P+ V +  L+    R    +    L + M +  ++   +S+N 
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           +I  +     L  AL+   ++   G+ P + T+  L++GLC   RVS+A   F +M    
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
             P+++++ TL+ G CR G I EA  L D +    L PT +TY T++DG+C+ GD   A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 439 QLKENMIN-QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
            L   M     I+P+V+ Y+ +++  CK G  S A+  F EM  KG+ PD F Y + I G
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
               G  S+A +L +EML +   PD++TYN L++   K G   EA EL  +M+  G IP+
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 359

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
            ITY S+I    +   L    D+F  M  KG SP + T+T LI  +    R++       
Sbjct: 360 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 419

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
           EM  +G+  N +TYN LI+G C +  ++ A  L   M   G+ P+  T   L++  C+ G
Sbjct: 420 EMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 479

Query: 678 NWQEALRLYKEM------LDRE-----IEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
             ++AL ++K M      LD       +EPD  T++ L+   +++   + A E  E +
Sbjct: 480 KLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEM 537



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 127/439 (28%), Positives = 203/439 (46%), Gaps = 36/439 (8%)

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           G+ E   L +A++L  +M+     P++  +  L+  + +  R       + +M RK +  
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           DI S+N L+  +C    +  A   F ++    L P VVT+ TL+ GLC    +  A    
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFF 172

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
             M      P+V+T+T ++NG C+ G +  A    + M+  GLQP +  Y T + G  K 
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 502 GDT------------------------------------SEAYRLQEEMLAKGFPPDLIT 525
           GDT                                    S+A  L  EM  KG  PDL T
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           YN ++ G C  G   +A +LL++M+     PD +TY ++I+A ++ G      +L++ ML
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEML 352

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
            +G+ P  +TY  +I     + RL+ A   F  M  KG  P+V T+  LI+G C  +RID
Sbjct: 353 PRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRID 412

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
               L  +M   G++ N  TY  LI+  C  G+   AL L ++M+   + PD  T + LL
Sbjct: 413 DGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLL 472

Query: 706 LKQLDKDYKVHAVEYLESL 724
               D      A+E  +++
Sbjct: 473 DGLCDNGKLKDALEMFKAM 491


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  312 bits (800), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 174/523 (33%), Positives = 280/523 (53%), Gaps = 18/523 (3%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +  KM  +GL P+V   + +I      G   +AR +   M   G+ P I  YN ++    
Sbjct: 172 LLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLS 231

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K G+M+EA   L E+QGRG  P+ VT+   I G+S+ G++ +A     +ML  GL  +  
Sbjct: 232 KAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNP 291

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
            Y  +I G+ + G L+EAL++   +   GV P + T +  I+GL K GRV +A   F E+
Sbjct: 292 LYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL 351

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
             K ++PD+ +Y++L+ G+C+ G + +AF L DE+  + + P +  YN L+DGLC+ GD+
Sbjct: 352 KEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDI 411

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A++L + M  +G+ PD +TY+ M++G CK  N++ A   F+EM  KG+QP  F Y   
Sbjct: 412 QRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNAL 471

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           + G  K GD  +A  L  EML KGF   L ++N L+ G CK   ++EA++L ++M+    
Sbjct: 472 VHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQI 530

Query: 555 IPDHITYTSIIHASLEMGDLRRGR-----------------DLFNNMLRKGLSPTLVTYT 597
           +PDH+TYT++I    + G +                      LF  M+ KG+ P  VTY 
Sbjct: 531 MPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYG 590

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           ++I+AH     L  AF    E+  KG+      ++ LI  LC+   + +A  L  +M E 
Sbjct: 591 LVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGEL 650

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
           G+ P+    + L+     AG   EA R+++ +    + PD  T
Sbjct: 651 GLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTT 693



 Score =  300 bits (768), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 178/538 (33%), Positives = 286/538 (53%), Gaps = 3/538 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + ++  +++ L + + M+  G+  ++   N +I  L   G   KA E+ + M   G KP+
Sbjct: 55  FMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPN 114

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             T+  +++ +C+E  M  ALELL EM+ R   P+ V+Y  +I G     +L  A  L+ 
Sbjct: 115 SRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLE 174

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M   GLK +   Y+ +I GY+ +G + EA  L + M   GVAP +  YN +I  L K G
Sbjct: 175 KMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAG 234

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           ++ +A     E+  + + PD +++   + GY ++G + EA   FDE+    L+P    Y 
Sbjct: 235 KMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYT 294

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            LI+G  + G+L  A  +  ++   G+LPDV T +  ++G  K G +  A + F+E+  K
Sbjct: 295 VLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEK 354

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           GL PD F Y++ I+G  K G+  +A+ L +EM  KG  P++  YN LV GLCK G ++ A
Sbjct: 355 GLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRA 414

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            +L   M   G  PD +TY+++I    +  ++     LF+ M  KG+ P    Y  L+H 
Sbjct: 415 RKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHG 474

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
               G +E A   F EM  KG     +++N LI+G C+  +I +A  LF +M  + I+P+
Sbjct: 475 CCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPD 533

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
             TYT +I+ +C AG  +EA  L+KEM +R +  D  T  AL  K + K  K   V Y
Sbjct: 534 HVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVD--TVFALFEKMVAKGVKPDEVTY 589



 Score =  296 bits (759), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 169/512 (33%), Positives = 270/512 (52%), Gaps = 1/512 (0%)

Query: 194 LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
           L F +M + GL PD   C+ +I      G   +   +  +M   GI  +++TYN ++   
Sbjct: 31  LTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGL 90

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           CK G+M++A E+L  M   GC PN  T+ +LI G+ R   + +A  L+ +M K  L  SA
Sbjct: 91  CKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSA 150

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
            SY  +I G      L  A  L E+M   G+ P +  Y+ LI G    GR+ +AR     
Sbjct: 151 VSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDG 210

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M    V PDI  YN ++    ++G + EA     E++ R L P  VT+   I G  + G 
Sbjct: 211 MSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGK 270

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           +  A +  + M++ G++P+   YT+++NG  K GNL  A   F  +   G+ PD    + 
Sbjct: 271 MTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSA 330

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            I G LK G   EA ++  E+  KG  PD+ TY+ L+ G CK G +E+A EL  +M   G
Sbjct: 331 FIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKG 390

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
             P+   Y +++    + GD++R R LF+ M  KGL P  VTY+ +I  +     +  AF
Sbjct: 391 IAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAF 450

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
             F EM  KG++P+   YNAL++G C+   +++A  LF +M ++G      ++  LI+  
Sbjct: 451 SLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG-FATTLSFNTLIDGY 509

Query: 674 CNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           C +   QEA +L++EM+ ++I PD+ T++ ++
Sbjct: 510 CKSCKIQEASQLFQEMIAKQIMPDHVTYTTVI 541



 Score =  278 bits (711), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 143/437 (32%), Positives = 241/437 (55%)

Query: 269 MQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
           M  +G  PN  TY ++  G  R   + +A+    +M K GLK   ++ + +I G+  +G 
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 329 LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNT 388
           + E L +++ MV+ G+   L TYN+LI+GLCK+G++  A      M+     P+  ++  
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 389 LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
           L+ GYCR  N+G A  L DE+  RNLVP+ V+Y  +I+GLC   DL +A +L E M   G
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
           + P+V+ Y+ ++ G    G +  AR   + M   G+ PD F Y   I+   K G   EA 
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
               E+  +G  PD +T+   + G  K G + EA +   +M+  G +P++  YT +I+  
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 300

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
            + G+L     +F ++   G+ P + T +  IH     GR++ A   FSE++ KG+ P+V
Sbjct: 301 FKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 360

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
            TY++LI+G C+   +++A+ L  +M  +GI PN + Y  L++  C +G+ Q A +L+  
Sbjct: 361 FTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDG 420

Query: 689 MLDREIEPDYCTHSALL 705
           M ++ +EPD  T+S ++
Sbjct: 421 MPEKGLEPDSVTYSTMI 437



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 91/281 (32%), Positives = 150/281 (53%)

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           M  +G++P+  TYTI+  G C+   ++ A+  F EM + GL+PD  A +  I G ++ GD
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
             E  R+++ M++ G P +LITYNVL+HGLCK G +E+A E+L+ M+  G  P+  T+  
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           +I       ++ R  +L + M ++ L P+ V+Y  +I+       L LA     +M   G
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
           ++PNV+ Y+ LI G     RI++A  L   M   G+ P+ + Y  +I+    AG  +EA 
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240

Query: 684 RLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
               E+  R ++PD  T  A +L          A +Y + +
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEM 281


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  312 bits (799), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 195/610 (31%), Positives = 320/610 (52%), Gaps = 10/610 (1%)

Query: 90  PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFV--FCTILEILIESGLLRSAYWVV 147
           P  L+ VL  ++    + L  F W ++Q   +    +   C ++ + + S  +++A  +V
Sbjct: 79  PSHLIWVLINLKNDYPLVLNLFNWAKSQSQQQFHPTLESLCIVVHLSVASNDIQTAKRLV 138

Query: 148 -------ETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKML 200
                  +  V  + H   ++LI           + DL   +  +   V +   +F+K+L
Sbjct: 139 FEFCAKPKIDVSKSFHLFTEMLIYTYKDWGSHPLVFDLYFQVLVENGFVLEAQKLFHKLL 198

Query: 201 RNGLLPDVKNCNRIIKVLRDNGFSVK-AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEM 259
           R G++  V +CN  +  L  N   +K A +V+    E G+  + V+ N +L   C+ G++
Sbjct: 199 RYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKV 258

Query: 260 QEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI 319
           +EA  LL +M  RG  P+ V+Y V+++G+ R GEL++   L+ ++   GLK   + YN I
Sbjct: 259 REAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNI 318

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           I    + G +VEA  L   M   GV P    Y  +I G CK G VS A   F EM RK +
Sbjct: 319 ILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKI 378

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
           +PDI++Y ++++G C+SG + EA  +F+E+  + L P  VTY  LIDG C+ G+++ A  
Sbjct: 379 VPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFS 438

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           +   M+ +G+ P+V+TYT + +G CK G + +A E  +EM RKGLQP+ + Y T + G  
Sbjct: 439 VHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLC 498

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           K+G+  +  +L EEM   GF PD ITY  L+   CK+G + +A+ELLR M+     P  +
Sbjct: 499 KIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLV 558

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
           T+  +++     G L  G  L   ML KG+ P   T+  L+  +  +  +      +  M
Sbjct: 559 TFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAM 618

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
             +G+ P+  TYN LI G C+ R + +A+ L  +M E+G      TY  LI        +
Sbjct: 619 HDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKF 678

Query: 680 QEALRLYKEM 689
            EA +L++EM
Sbjct: 679 VEARKLFEEM 688



 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 133/427 (31%), Positives = 224/427 (52%), Gaps = 6/427 (1%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +++ L + +++   GL PD    N II +L  NG  V+A ++ R M ++G+ P  V Y T
Sbjct: 293 LDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTT 352

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++  FCK G +  A +L  EM+ +   P+ VTY  +I G  ++G++ +AR +  +ML  G
Sbjct: 353 VISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKG 412

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           L+    +Y  +I GY + G + EA ++  +MV +G+ P + TY  L  GLCK G +  A 
Sbjct: 413 LEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVAN 472

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               EM RK + P++ +YNT++ G C+ GNI +   L +E+      P  +TY TL+D  
Sbjct: 473 ELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAY 532

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G++  A +L   M+N+ + P ++T+ +++NG C  G L         ML KG+ P+ 
Sbjct: 533 CKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNA 592

Query: 489 FAYTT---QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
             + +   Q   +  +  T+E Y+    M  +G  PD  TYN+L+ G CK  +++EA  L
Sbjct: 593 TTFNSLMKQYCIKNNMRATTEIYK---AMHDRGVMPDSNTYNILIKGHCKARNMKEAWFL 649

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
            ++MV  G+     TY ++I    +       R LF  M + GL      Y + +  +  
Sbjct: 650 HKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYE 709

Query: 606 RGRLELA 612
            G  E+ 
Sbjct: 710 EGNWEIT 716



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/139 (21%), Positives = 74/139 (53%), Gaps = 1/139 (0%)

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR-LELAFMYFSEMQVKGIRPN 627
           +E G +   + LF+ +LR G+  ++ +  + +   +     +++A   F E    G+  N
Sbjct: 182 VENGFVLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWN 241

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYK 687
            ++ N +++ LC+L ++ +A+ L + M + G  P+  +Y ++++  C  G   + L+L  
Sbjct: 242 TVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVD 301

Query: 688 EMLDREIEPDYCTHSALLL 706
           E+  + ++PD   ++ ++L
Sbjct: 302 ELKGKGLKPDEYIYNNIIL 320


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  311 bits (797), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 205/694 (29%), Positives = 342/694 (49%), Gaps = 37/694 (5%)

Query: 12  SAHSYHYFYLKKVRFFFPFCFSVHTYPSISESNNKDSVLNPESESYYKELIISTVEEKPW 71
           S  S + + + +  F+F     +   P +S SN  +S    +  S  K      +++  W
Sbjct: 60  SLTSINAYCISRPFFWFTSFLCIFRLPFVSYSNANNSFQYLDIGSLRK-----IIQQDLW 114

Query: 72  AFCNNRWVSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTIL 131
              N+  +   F + ++ P  + ++L  +RE P++AL+FF+W  +Q G +     +C I+
Sbjct: 115 ---NDPKIVVLFDSALA-PIWVSKILLGLREDPKLALKFFKWAGSQVGFRHTTESYCIIV 170

Query: 132 EILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQ 191
            ++  + +   A+  V+ V+   M+  +D+    G   C    I D+L   ++ +++   
Sbjct: 171 HLVFRARMYTDAHDTVKEVI---MNSRMDM----GFPVC---NIFDML---WSTRNICVS 217

Query: 192 CLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLD 251
              VF+ +                 V  + G   +A E +  M  F   P   + N +L 
Sbjct: 218 GSGVFDVLF---------------SVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLH 262

Query: 252 SFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKV 311
              K G  Q   +   +M G G +P+  TYNV+I    + G+LE +R L   M ++GL  
Sbjct: 263 RLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSP 322

Query: 312 SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRF 371
              +YN +I GY + G L E  +L  EM   G  P + TYN LI   CK+ ++  A   F
Sbjct: 323 DVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYF 382

Query: 372 FEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY 431
            EM    + P++++Y+TL+  +C+ G +  A  LF ++R   L+P   TY +LID  C+ 
Sbjct: 383 SEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKA 442

Query: 432 GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAY 491
           G+L  A +L  +M+  G+  +++TYT +++G CK G +  A E F  ML+ G+ P++  Y
Sbjct: 443 GNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVY 502

Query: 492 TTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
           T  + G +K     +A ++ ++M      PDLI Y  ++ G C    LEE   +L +M  
Sbjct: 503 TALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKS 562

Query: 552 DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLEL 611
            G   + +  T+II A  + G      + F  M   G+  T+VTY VLI      G +EL
Sbjct: 563 RGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVEL 622

Query: 612 AFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
           A  YF  M   G++PNV  Y +LI+GLC+   I+ A  LF +M+  G+ P+   +T LI+
Sbjct: 623 AVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALID 682

Query: 672 ENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            N   GN QEAL L   M +  IE D   +++L+
Sbjct: 683 GNLKHGNLQEALVLISRMTELAIEFDLHVYTSLV 716



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 141/442 (31%), Positives = 236/442 (53%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K   +E+   +FN+M   G +PD+   N +I          +A E +  M   G+KP+
Sbjct: 334 YGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPN 393

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +VTY+T++D+FCKEG MQ A++L  +M+  G  PN  TY  LI    + G L +A  L+ 
Sbjct: 394 VVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLN 453

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           DML+ G+K++  +Y  ++ G  + G ++EA  +   M+  G++P    Y  L++G  K  
Sbjct: 454 DMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAE 513

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R+ DA     +M   N+ PD+I Y ++++G+C    + E  L+ +E++SR +    V   
Sbjct: 514 RMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVIST 573

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           T+ID   + G    A    + M + G+   ++TY ++++G CK G + +A ++F  ML  
Sbjct: 574 TIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSL 633

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           GLQP+   YT+ I G  K      A +L +EM  +G  PD+  +  L+ G  K G+L+EA
Sbjct: 634 GLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEA 693

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             L+ +M       D   YTS++    + G+L + R  FN M+ KG+ P  V    L+  
Sbjct: 694 LVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLRE 753

Query: 603 HAARGRLELAFMYFSEMQVKGI 624
           +  RG+L+ A    +EM+  G+
Sbjct: 754 YYKRGQLDEAIELKNEMERMGL 775



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/323 (32%), Positives = 164/323 (50%), Gaps = 2/323 (0%)

Query: 405 LFDELRS-RNL-VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
           +FD L S RN+ V     ++ L       G LE A +    M N   LP   +   +++ 
Sbjct: 204 IFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHR 263

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
             K GN  + R+FFN+M+  G+ P  F Y   I    K GD   + RL  +M   G  PD
Sbjct: 264 LSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPD 323

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
           ++TYN L+ G  K+GSLEE   L  +M   G +PD ITY  +I+   +   + R  + F+
Sbjct: 324 VVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFS 383

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
            M   GL P +VTY+ LI A    G ++ A   F +M+  G+ PN  TY +LI+  C+  
Sbjct: 384 EMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAG 443

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
            + +A+ L  DM + G+  N  TYT L++  C AG   EA  +++ ML   I P+   ++
Sbjct: 444 NLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYT 503

Query: 703 ALLLKQLDKDYKVHAVEYLESLT 725
           AL+   +  +    A++ L+ +T
Sbjct: 504 ALVHGYIKAERMEDAMKILKQMT 526


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  311 bits (797), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 170/549 (30%), Positives = 283/549 (51%), Gaps = 35/549 (6%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +++   + ++M++    PD    N +I  L   G    AR V +MM E    P ++TY +
Sbjct: 108 IDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTS 167

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++   C+   + EA +L+ +M+  G +P+ V YN L+ G  +  +LE+   L+ +M++ G
Sbjct: 168 LIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAG 227

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            +    SYN ++    E G   EA  + E+M+ +   P + TYN L+ G CK  ++ +A 
Sbjct: 228 REPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAE 287

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               +M+ +   P +I+Y TL+ G+ R+  + +A+ + +++    + P +VTYN L+DGL
Sbjct: 288 RLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGL 347

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G LE A +L E M+ +   PDV+TY+I+VNG CK+G +  AR     ML +G QP+ 
Sbjct: 348 CKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNL 407

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV------------------ 530
             + T I G  K G   E +++ E M      PD++TY+ L+                  
Sbjct: 408 VTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGI 467

Query: 531 -----------HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
                       GLC  G +EEA E++  M   G  P    Y  II     + D+ RG +
Sbjct: 468 SPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGG---LCDVERGDE 524

Query: 580 ---LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
              +   M  +G  P L TY++LI+      R+E A      M  KG  P+V TY +LI+
Sbjct: 525 ALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLID 584

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
           G C++ ++D AY  F  M + G  P+K  Y ILI+  C +GN ++A+ + + ML++   P
Sbjct: 585 GFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNP 644

Query: 697 DYCTHSALL 705
           D  T+ +L+
Sbjct: 645 DAATYFSLM 653



 Score =  285 bits (730), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 160/513 (31%), Positives = 266/513 (51%), Gaps = 8/513 (1%)

Query: 193 LLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDS 252
           L + N+ML     PDV   N I+K     G   +A   +R  G+    P+  TY  ++  
Sbjct: 44  LEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSHFR--GKMWCSPTAFTYCILIHG 101

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
            C+   + EA +LL EM  + C P+   YN LI G  + G+++ AR +++ ML+      
Sbjct: 102 LCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPD 161

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
             +Y  +I G  +   L EA  L E+M   G+ P    YN L+ GLCK  ++ +      
Sbjct: 162 VITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLE 221

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
           EM+     PD  SYNT++   C SG   EA  + +++  +   P VVTYN+L+DG C+  
Sbjct: 222 EMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVS 281

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
            ++ A++L E+M+ +   P VITYT ++ G  +   L+ A     +M + G+ PD   Y 
Sbjct: 282 KMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYN 341

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
             + G  K G   EA+ L E M+ K   PD++TY++LV+GLCKLG +++A  LL  M+  
Sbjct: 342 CLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLER 401

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
           G  P+ +T+ ++I    + G +  G  +   M     +P +VTY+ LI  +    R++ A
Sbjct: 402 GCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDA 461

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
           F       + GI P+  +Y++++ GLC   ++++A  +   M ++G  P    Y ++I  
Sbjct: 462 F------AILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGG 515

Query: 673 NCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            C+     EAL++ + M +R  EP+  T+S L+
Sbjct: 516 LCDVERGDEALKMLQVMSERGCEPNLYTYSILI 548



 Score =  278 bits (712), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 152/454 (33%), Positives = 243/454 (53%), Gaps = 6/454 (1%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K++ +E+   +  +M+  G  PD  + N ++  L ++G   +A ++   M E    P +V
Sbjct: 209 KQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVV 268

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TYN+++D FCK  +M EA  LL +M GR C+P  +TY  LI GFSR   L  A  ++ DM
Sbjct: 269 TYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDM 328

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
            K G+     +YN ++ G  + G L EA  L E MV +  AP + TY+IL+ GLCK G+V
Sbjct: 329 FKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKV 388

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            DAR     ML +   P+++++NT++ G+C++G + E   + + ++  +  P VVTY+TL
Sbjct: 389 DDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTL 448

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           IDG C+      A ++++     GI PD  +Y+ M+ G C  G +  A+E  + M ++G 
Sbjct: 449 IDGYCK------ANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGC 502

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            P    Y   I G   +    EA ++ + M  +G  P+L TY++L++GLCK   +E+A  
Sbjct: 503 PPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAIN 562

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           +L  M+  G +PD  TYTS+I    ++  +      F  M   G  P  + Y +LI    
Sbjct: 563 VLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFC 622

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
             G +E A      M  KG  P+  TY +L+  L
Sbjct: 623 QSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSL 656



 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 148/473 (31%), Positives = 247/473 (52%), Gaps = 17/473 (3%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALE----LLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
           P ++T+NT+L ++C+ G++  AL      +W      CSP   TY +LI G  +   +++
Sbjct: 57  PDVITHNTILKAYCQIGDLDRALSHFRGKMW------CSPTAFTYCILIHGLCQCQRIDE 110

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  L+ +M++      A  YN +I G  + G +  A N+ + M+ R   P + TY  LI 
Sbjct: 111 AYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIV 170

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           G C+   + +AR    +M    + PD ++YN LL G C+   + E   L +E+      P
Sbjct: 171 GCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREP 230

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
              +YNT++  LC  G  E A ++ E MI +   PDV+TY  +++G CK+  +  A    
Sbjct: 231 DTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLL 290

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
            +M+ +   P    YTT I G  +    ++AYR+ E+M   G  PDL+TYN L+ GLCK 
Sbjct: 291 EDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKA 350

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G LEEA+ELL  MV     PD +TY+ +++   ++G +   R L   ML +G  P LVT+
Sbjct: 351 GKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTF 410

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
             +I      G+++        M+     P+V+TY+ LI+G C+  R+  A+ +      
Sbjct: 411 NTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL----- 465

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQL 709
            GI P+K +Y+ ++   C+ G  +EA  +  +++ ++  P   +H AL++  L
Sbjct: 466 -GISPDKASYSSMLEGLCSTGKVEEAQEVM-DLMTKQGCPPTSSHYALIIGGL 516



 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 154/433 (35%), Positives = 226/433 (52%), Gaps = 8/433 (1%)

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           P+  TY  LITGFSR G  +    +  +ML         ++N I+  Y + G L  AL+ 
Sbjct: 22  PSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSH 81

Query: 336 EEEMVTRG---VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
                 RG    +PT  TY ILI+GLC+  R+ +A     EM++K+  PD   YN L+ G
Sbjct: 82  -----FRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAG 136

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
            C+ G I  A  +   +  R+ VP V+TY +LI G C+   L+ A++L E M   G+ PD
Sbjct: 137 LCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPD 196

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
            + Y  ++NG CK   L    +   EM+  G +PD F+Y T +A   + G   EA ++ E
Sbjct: 197 TVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILE 256

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           +M+ K   PD++TYN L+ G CK+  ++EA  LL  MVG    P  ITYT++I       
Sbjct: 257 KMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRAD 316

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
            L     +  +M + G+SP LVTY  L+      G+LE A      M  K   P+V+TY+
Sbjct: 317 RLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYS 376

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
            L+NGLC+L ++D A  L   M E G  PN  T+  +I+  C AG   E  ++ + M + 
Sbjct: 377 ILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEV 436

Query: 693 EIEPDYCTHSALL 705
              PD  T+S L+
Sbjct: 437 SCTPDVVTYSTLI 449



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 141/456 (30%), Positives = 233/456 (51%), Gaps = 30/456 (6%)

Query: 117 QPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKIL 176
           + G + D F + T++  L ESG    A  ++E +  +      DV+              
Sbjct: 225 EAGREPDTFSYNTVVACLCESGKYEEAGKILEKM--IEKKCGPDVV------------TY 270

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR--EVYRMM 234
           + L+  + K S +++   +   M+     P V     +I      GFS   R  + YR+M
Sbjct: 271 NSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLI-----GGFSRADRLADAYRVM 325

Query: 235 GEF---GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
            +    GI P +VTYN +LD  CK G+++EA ELL  M  + C+P+ VTY++L+ G  + 
Sbjct: 326 EDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKL 385

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G+++ AR L+  ML+ G + +  ++N +I G+ + G + E   + E M      P + TY
Sbjct: 386 GKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTY 445

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           + LI G CK  R+ DA    F +L   + PD  SY+++L G C +G + EA  + D +  
Sbjct: 446 STLIDGYCKANRMQDA----FAIL--GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTK 499

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           +   PT   Y  +I GLC     + A ++ + M  +G  P++ TY+I++NG CK   +  
Sbjct: 500 QGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVED 559

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A    + ML KG  PD   YT+ I G  K+     AY+  + M   G  PD + YN+L+ 
Sbjct: 560 AINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILIS 619

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
           G C+ G++E+A E+++ M+  G  PD  TY S++ +
Sbjct: 620 GFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRS 655



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 146/305 (47%), Gaps = 2/305 (0%)

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           E +  F E  S    P+  TY  LI G  R G+ ++  ++   M+ +   PDVIT+  ++
Sbjct: 7   EGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTIL 66

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
              C++G+L  A   F    +    P  F Y   I G  +     EAY+L +EM+ K   
Sbjct: 67  KAYCQIGDLDRALSHFRG--KMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCH 124

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           PD   YN L+ GLCK+G ++ A  +L+ M+    +PD ITYTS+I    +   L   R L
Sbjct: 125 PDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKL 184

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
              M   GL+P  V Y  L++    + +LE       EM   G  P+  +YN ++  LC 
Sbjct: 185 MEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCE 244

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
             + ++A  +   M E+   P+  TY  L++  C      EA RL ++M+ R   P   T
Sbjct: 245 SGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVIT 304

Query: 701 HSALL 705
           ++ L+
Sbjct: 305 YTTLI 309


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 191/629 (30%), Positives = 313/629 (49%), Gaps = 18/629 (2%)

Query: 90  PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVET 149
           P L  +++        + +RFF+WV  Q     D      +L +L+   L   A   V  
Sbjct: 69  PHLAGKIIGLQSNNVELGVRFFKWVCRQSSYCYDLDGRIQLLGVLVSRDLFGVAQKAVVL 128

Query: 150 VV---------CVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKML 200
           ++          V + G LD +   G    +S      LL+   K +M     LV+ +M+
Sbjct: 129 LIQECEDSENGVVKLMGALDGMTELGFR--LSYPCYSTLLMCLAKLNMGFVAFLVYRRMV 186

Query: 201 RNGLLPDVKNCNRIIKVLRDNGFSVKAREVY---RMMGEFGIKPSIVTYNTMLDSFCKEG 257
             G +    +   ++  L  NGF V+A E++    +   FG+   + T  +++ + C+  
Sbjct: 187 NEGFVLGGIDYRTVVNALCKNGF-VQAAEMFCCKVLRLGFGLDTHVCT--SLVLANCRRD 243

Query: 258 EMQEALELLWEM-QGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSY 316
           ++ EA  +  +M +   C PN VTY++LI G    G LE+A  L ++M++ G + S  +Y
Sbjct: 244 DLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTY 303

Query: 317 NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
             +I    + G+  +A+ + +EM T+   P + TY ILI  LC+ G++ +A   F +ML+
Sbjct: 304 TVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLK 363

Query: 377 KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
             + P II++N L+ GYC+ G +  AF L   +   N  P + TYN L++GLCR      
Sbjct: 364 HGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYK 423

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
           A  L   +++ G+LPD +TY I+V+G CK G L+MA   FN M   GL+PD F +T  I 
Sbjct: 424 AFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALID 483

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
           G  KLG   +A  +   M+ KG   D +T+  L+ G CK+G  ++   L   MV +  + 
Sbjct: 484 GLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLT 543

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
              T+   + A  +   L     +   M++ GL P++VT+T+LI  H   G   L+    
Sbjct: 544 TAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKML 603

Query: 617 SEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNA 676
             M+  G  PNV TY  +INGLC   R+++A  +   M   G+ PN +TY +L+  +  A
Sbjct: 604 ERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKA 663

Query: 677 GNWQEALRLYKEMLDREIEPDYCTHSALL 705
           G    A ++   M+    +P+   +SALL
Sbjct: 664 GRLDRAFQIVSTMVKNGCQPNSHIYSALL 692



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 142/589 (24%), Positives = 253/589 (42%), Gaps = 42/589 (7%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVV---CVNMHGILDVLI 163
           A R F  +  +   + +   +  ++  L E+G L  A+ + + +V   C        VLI
Sbjct: 248 AFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLI 307

Query: 164 GGGLSSCVSIKILDLLLLIYTKKSM------------------VEQCLLVFNKMLRNGLL 205
                  ++ K + +L  + TK  +                  +E+   VF KML++GL 
Sbjct: 308 KAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLC 367

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P +   N +I      G+ V A ++  +M +   KP+I TYN +++  C+  +  +A  L
Sbjct: 368 PGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLL 427

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           L  +   G  P+ VTYN+L+ GF + G+L  A  +   M   GL+    ++  +I G  +
Sbjct: 428 LRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCK 487

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
            G L +A  +   MV +G++    T+  LI G CK G+  D    F  M+    +    +
Sbjct: 488 LGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHT 547

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           +N  L    +   + EA  +  ++    LVP+VVT+  LI+G CR G+  ++ ++ E M 
Sbjct: 548 FNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMK 607

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
             G  P+V TYTI++NG C  G +  A      M   G+ P+ F Y   +   +K G   
Sbjct: 608 QAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLD 667

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLC--------------------KLGSLEEANEL 545
            A+++   M+  G  P+   Y+ L+ G                       L S E  N  
Sbjct: 668 RAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNC 727

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
           L   +    +P    Y  ++    + G +     L  +M++ GL P     +++ H +  
Sbjct: 728 LSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSIIEH-YCK 786

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
             + +    +   +      P+  +Y  +I+GL    R+ +A  L  D+
Sbjct: 787 TCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDL 835



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 117/239 (48%), Gaps = 1/239 (0%)

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
            Y+T +    KL     A+ +   M+ +GF    I Y  +V+ LCK G ++ A     K+
Sbjct: 161 CYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKV 220

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK-GLSPTLVTYTVLIHAHAARGR 608
           +  GF  D    TS++ A+    DL     +F  M ++    P  VTY++LIH     GR
Sbjct: 221 LRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGR 280

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           LE AF    EM  KG +P+  TY  LI   C +   D+A  +  +M  +  +PN +TYTI
Sbjct: 281 LEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTI 340

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLG 727
           LI+  C  G  +EA  ++++ML   + P   T +AL+     + + V A + L  +  G
Sbjct: 341 LIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKG 399



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 89/215 (41%), Gaps = 34/215 (15%)

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           M   GF      Y+ L+  L KL     A  + R+MV +GF+   I Y ++++A  + G 
Sbjct: 150 MTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGF 209

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
           ++        +LR G        T L+ A+  R  L  AF  F +M              
Sbjct: 210 VQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMS------------- 256

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
                                +EE   PN  TY+ILI+  C AG  +EA +L +EM+++ 
Sbjct: 257 ---------------------KEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKG 295

Query: 694 IEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLGA 728
            +P   T++ L+  + D      A++ L+ +   A
Sbjct: 296 CQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKA 330


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 171/524 (32%), Positives = 282/524 (53%), Gaps = 2/524 (0%)

Query: 184 TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
           +K   ++  + +  +M+ NG  P+V + N ++           A  +   M   G  P +
Sbjct: 55  SKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDV 114

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           V+Y T+++  CK  ++ EA  ++ +M  RGC PN +TY  L+ GF R G+L+ A  L+R 
Sbjct: 115 VSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRK 174

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG-VAPTLATYNILIYGLCKWG 362
           M + G + +A +YN I+ G      L  AL L +EM   G   P + TY+ ++  L K G
Sbjct: 175 MTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSG 234

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           +V DA      M+ K   P++++Y++LL+G C++G + EA  L   +      P +VTYN
Sbjct: 235 KVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYN 294

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           T+IDG C+ G ++ A  L E M++ G  P+V+TYT++++  CK G    A      M+ K
Sbjct: 295 TIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEK 354

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G  P+ F Y + +    K  +   A +L   M+ KG  P++++YN ++ GLCK   + E 
Sbjct: 355 GYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEG 414

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             LL +M+ +  +PD +T+ +II A  +   +    +LFN +   G +P LVTY  L+H 
Sbjct: 415 VLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHG 474

Query: 603 HAARGRLELAFMYFSEMQVK-GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
                R + A     EM  K G  P++ITYN +I+GLC+ +R+D+AY LF+ M  +G+ P
Sbjct: 475 LCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAP 534

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +  TY+I+I+  C      EA  + + ML    +P   T+  L+
Sbjct: 535 DDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLI 578



 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 169/506 (33%), Positives = 274/506 (54%), Gaps = 3/506 (0%)

Query: 189 VEQCLLVFNKMLRNGLLP-DVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
           ++  L +F +M  +G  P DV   + I+  L  +G    A  +   M   G  P++VTY+
Sbjct: 200 LDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYS 259

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
           ++L   CK G++ EA  LL  M   GCSPN VTYN +I G  + G +++A  L+ +M+  
Sbjct: 260 SLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDG 319

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           G + +  +Y  ++  + + G   +A+ L E MV +G  P L TYN L+   CK   V  A
Sbjct: 320 GCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERA 379

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
                 M++K  +P+++SYNT++ G C++  + E  LL +++ S N VP +VT+NT+ID 
Sbjct: 380 CQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDA 439

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK-GLQP 486
           +C+   +++A +L   +   G  P+++TY  +V+G CK      A     EM RK G  P
Sbjct: 440 MCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSP 499

Query: 487 DRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
           D   Y T I G  K      AY+L  +ML+ G  PD +TY++++  LCK   ++EAN +L
Sbjct: 500 DIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVL 559

Query: 547 RKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAAR 606
             M+ +GF P  ITY ++I    + G+L +  ++   +L KG  P +VT+++ I   + R
Sbjct: 560 ELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKR 619

Query: 607 GRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
           GRL  A      M   G+ P+ +TYN L+ G C   R + A  LF  M + G  P+  TY
Sbjct: 620 GRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATY 679

Query: 667 TILINENCNAGNWQEAL-RLYKEMLD 691
           T L+    +  ++++ L  + K M+D
Sbjct: 680 TTLVGHLVDKKSYKDLLAEVSKSMVD 705



 Score =  294 bits (753), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 160/502 (31%), Positives = 270/502 (53%), Gaps = 2/502 (0%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           PD    N +I  L  +     A  +   M + G  P++ +YNT+L  FCK   ++ AL L
Sbjct: 42  PDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWL 101

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           L +M  RGC P+ V+Y  +I G  +  ++++A  ++  M++ G + +  +Y  ++ G+  
Sbjct: 102 LEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCR 161

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK-NVIPDII 384
            G L  A+ L  +M  RG  P   TYN +++GLC   ++  A   F EM    +  PD+ 
Sbjct: 162 VGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVF 221

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
           +Y+T++    +SG + +A  L + + S+   P VVTY++L+ GLC+ G L+ A  L + M
Sbjct: 222 TYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRM 281

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
              G  P+++TY  +++G CK+G +  A     EM+  G QP+   YT  +    K G  
Sbjct: 282 TRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKA 341

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
            +A  L E M+ KG+ P+L TYN L+   CK   +E A +LL  M+  G +P+ ++Y ++
Sbjct: 342 EDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTV 401

Query: 565 IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
           I    +   +  G  L   ML     P +VT+  +I A     R+++A+  F+ +Q  G 
Sbjct: 402 IAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGC 461

Query: 625 RPNVITYNALINGLCRLRRIDQAYGLFIDM-EEEGILPNKYTYTILINENCNAGNWQEAL 683
            PN++TYN+L++GLC+ RR DQA  L  +M  ++G  P+  TY  +I+  C +     A 
Sbjct: 462 TPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAY 521

Query: 684 RLYKEMLDREIEPDYCTHSALL 705
           +L+ +ML   + PD  T+S ++
Sbjct: 522 KLFLQMLSDGLAPDDVTYSIVI 543



 Score =  291 bits (746), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 168/530 (31%), Positives = 278/530 (52%), Gaps = 3/530 (0%)

Query: 198 KMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG-IKPSIVTYNTMLDSFCKE 256
           KM   G  P+    N I+  L        A ++++ M E G   P + TY+T++DS  K 
Sbjct: 174 KMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKS 233

Query: 257 GEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSY 316
           G++ +A  L+  M  +GCSPN VTY+ L+ G  + G+L++A  L++ M + G   +  +Y
Sbjct: 234 GKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTY 293

Query: 317 NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
           N II G+ + G + EA +L EEMV  G  P + TY +L+   CK G+  DA      M+ 
Sbjct: 294 NTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVE 353

Query: 377 KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
           K  +P++ +YN+LL  +C+   +  A  L   +  +  VP VV+YNT+I GLC+   +  
Sbjct: 354 KGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHE 413

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
              L E M++   +PD++T+  +++  CK   + +A E FN +   G  P+   Y + + 
Sbjct: 414 GVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVH 473

Query: 497 GELKLGDTSEA-YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
           G  K     +A Y L+E    +G  PD+ITYN ++ GLCK   ++ A +L  +M+ DG  
Sbjct: 474 GLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLA 533

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           PD +TY+ +I +  +   +    ++   ML+ G  P  +TY  LI      G L+ A   
Sbjct: 534 PDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEI 593

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
              +  KG  P+V+T++  I+ L +  R+ QA  L   M   G++P+  TY  L+   C+
Sbjct: 594 LQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCD 653

Query: 676 AGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLD-KDYKVHAVEYLESL 724
           A   ++A+ L++ M     EPD  T++ L+   +D K YK    E  +S+
Sbjct: 654 ASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSM 703



 Score =  282 bits (722), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 160/536 (29%), Positives = 274/536 (51%), Gaps = 47/536 (8%)

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M   G+K     + ++L   C  G+  +A+    EM  + C P+ VTYN +I G S++  
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMS-KTCPPDSVTYNTMINGLSKSDR 59

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           L+ A  L+ +M+  G   +  SYN ++ G+ +   +  AL L E+MV RG  P + +Y  
Sbjct: 60  LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           +I GLCK  +V +A     +M+++   P++I+Y TL+ G+CR G++  A  L  ++  R 
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 179

Query: 414 LVPTVVTYNTLIDGLC------------------------------------RYGDLEVA 437
             P  +TYN ++ GLC                                    + G ++ A
Sbjct: 180 YRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDA 239

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
            +L E M+++G  P+V+TY+ +++G CK G L  A      M R G  P+   Y T I G
Sbjct: 240 CRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDG 299

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
             KLG   EAY L EEM+  G  P+++TY VL+   CK G  E+A  L+  MV  G++P+
Sbjct: 300 HCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPN 359

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
             TY S++    +  ++ R   L ++M++KG  P +V+Y  +I       ++    +   
Sbjct: 360 LFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLE 419

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
           +M      P+++T+N +I+ +C+  R+D AY LF  ++E G  PN  TY  L++  C + 
Sbjct: 420 QMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSR 479

Query: 678 NWQEALRLYKEMLDRE-IEPDYCTHSALL-----LKQLDKDYKVHAVEYLESLTLG 727
            + +A  L +EM  ++   PD  T++ ++      K++D+ YK+    +L+ L+ G
Sbjct: 480 RFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKL----FLQMLSDG 531



 Score =  275 bits (704), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 168/533 (31%), Positives = 258/533 (48%), Gaps = 50/533 (9%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           AL+ F+ +E       D F + TI++ L++SG +  A  +VE                  
Sbjct: 203 ALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEA----------------- 245

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
                                           M+  G  P+V   + ++  L   G   +
Sbjct: 246 --------------------------------MVSKGCSPNVVTYSSLLHGLCKAGKLDE 273

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A  + + M   G  P+IVTYNT++D  CK G + EA  LL EM   GC PN VTY VL+ 
Sbjct: 274 ATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLD 333

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
            F + G+ E A GL+  M++ G   +  +YN ++  + +K  +  A  L   M+ +G  P
Sbjct: 334 AFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVP 393

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
            + +YN +I GLCK  +V +      +ML  N +PDI+++NT++   C++  +  A+ LF
Sbjct: 394 NVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELF 453

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI-NQGILPDVITYTIMVNGSCK 465
           + ++     P +VTYN+L+ GLC+    + A+ L   M   QG  PD+ITY  +++G CK
Sbjct: 454 NLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCK 513

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
              +  A + F +ML  GL PD   Y+  I+   K     EA  + E ML  GF P  IT
Sbjct: 514 SKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAIT 573

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           Y  L+ G CK G+L++A E+L+ ++  G  PD +T++  I    + G LR+  +L   ML
Sbjct: 574 YGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETML 633

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           R GL P  VTY  L+       R E A   F  M+  G  P+  TY  L+  L
Sbjct: 634 RAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHL 686


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 191/629 (30%), Positives = 313/629 (49%), Gaps = 18/629 (2%)

Query: 90  PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVET 149
           P L  +++        + +RFF+WV  Q     D      +L +L+   L   A   V  
Sbjct: 46  PHLAGKIIGLQSNNVELGVRFFKWVCRQSSYCYDLDGRIQLLGVLVSRDLFGVAQKAVVL 105

Query: 150 VV---------CVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKML 200
           ++          V + G LD +   G    +S      LL+   K +M     LV+ +M+
Sbjct: 106 LIQECEDSENGVVKLMGALDGMTELGFR--LSYPCYSTLLMCLAKLNMGFVAFLVYRRMV 163

Query: 201 RNGLLPDVKNCNRIIKVLRDNGFSVKAREVY---RMMGEFGIKPSIVTYNTMLDSFCKEG 257
             G +    +   ++  L  NGF V+A E++    +   FG+   + T  +++ + C+  
Sbjct: 164 NEGFVLGGIDYRTVVNALCKNGF-VQAAEMFCCKVLRLGFGLDTHVCT--SLVLANCRRD 220

Query: 258 EMQEALELLWEM-QGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSY 316
           ++ EA  +  +M +   C PN VTY++LI G    G LE+A  L ++M++ G + S  +Y
Sbjct: 221 DLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTY 280

Query: 317 NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
             +I    + G+  +A+ + +EM T+   P + TY ILI  LC+ G++ +A   F +ML+
Sbjct: 281 TVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLK 340

Query: 377 KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
             + P II++N L+ GYC+ G +  AF L   +   N  P + TYN L++GLCR      
Sbjct: 341 HGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYK 400

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
           A  L   +++ G+LPD +TY I+V+G CK G L+MA   FN M   GL+PD F +T  I 
Sbjct: 401 AFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALID 460

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
           G  KLG   +A  +   M+ KG   D +T+  L+ G CK+G  ++   L   MV +  + 
Sbjct: 461 GLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLT 520

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
              T+   + A  +   L     +   M++ GL P++VT+T+LI  H   G   L+    
Sbjct: 521 TAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKML 580

Query: 617 SEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNA 676
             M+  G  PNV TY  +INGLC   R+++A  +   M   G+ PN +TY +L+  +  A
Sbjct: 581 ERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKA 640

Query: 677 GNWQEALRLYKEMLDREIEPDYCTHSALL 705
           G    A ++   M+    +P+   +SALL
Sbjct: 641 GRLDRAFQIVSTMVKNGCQPNSHIYSALL 669



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 160/622 (25%), Positives = 273/622 (43%), Gaps = 68/622 (10%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVV---CVNMHGILDVLI 163
           A R F  +  +   + +   +  ++  L E+G L  A+ + + +V   C        VLI
Sbjct: 225 AFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLI 284

Query: 164 GGGLSSCVSIKILDLLLLIYTKKSM------------------VEQCLLVFNKMLRNGLL 205
                  ++ K + +L  + TK  +                  +E+   VF KML++GL 
Sbjct: 285 KAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLC 344

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P +   N +I      G+ V A ++  +M +   KP+I TYN +++  C+  +  +A  L
Sbjct: 345 PGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLL 404

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           L  +   G  P+ VTYN+L+ GF + G+L  A  +   M   GL+    ++  +I G  +
Sbjct: 405 LRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCK 464

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
            G L +A  +   MV +G++    T+  LI G CK G+  D    F  M+    +    +
Sbjct: 465 LGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHT 524

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           +N  L    +   + EA  +  ++    LVP+VVT+  LI+G CR G+  ++ ++ E M 
Sbjct: 525 FNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMK 584

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
             G  P+V TYTI++NG C  G +  A      M   G+ P+ F Y   +   +K G   
Sbjct: 585 QAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLD 644

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
            A+++   M+  G  P+   Y+ L+                      GF+   ++ T+I 
Sbjct: 645 RAFQIVSTMVKNGCQPNSHIYSALL---------------------SGFV---LSNTAIG 680

Query: 566 HASL-EMGDLRRGRDLF-----NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
             +L   GDL   R L      NN L   +      + ++   HA + R         E+
Sbjct: 681 ARALSSTGDL-DARSLSSEENDNNCLSSHV------FRLMDVDHALKIR--------DEI 725

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
           +  G+ P    YN L+ GLC+  RI +A  L  DM + G+ P+K   +I I   C    +
Sbjct: 726 KKCGV-PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSI-IEHYCKTCKY 783

Query: 680 QEALRLYKEMLDREIEPDYCTH 701
              L   K +LD +  P + ++
Sbjct: 784 DNCLEFMKLVLDNKFVPSFASY 805



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 117/239 (48%), Gaps = 1/239 (0%)

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
            Y+T +    KL     A+ +   M+ +GF    I Y  +V+ LCK G ++ A     K+
Sbjct: 138 CYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKV 197

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK-GLSPTLVTYTVLIHAHAARGR 608
           +  GF  D    TS++ A+    DL     +F  M ++    P  VTY++LIH     GR
Sbjct: 198 LRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGR 257

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           LE AF    EM  KG +P+  TY  LI   C +   D+A  +  +M  +  +PN +TYTI
Sbjct: 258 LEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTI 317

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLG 727
           LI+  C  G  +EA  ++++ML   + P   T +AL+     + + V A + L  +  G
Sbjct: 318 LIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKG 376



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 89/215 (41%), Gaps = 34/215 (15%)

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           M   GF      Y+ L+  L KL     A  + R+MV +GF+   I Y ++++A  + G 
Sbjct: 127 MTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGF 186

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
           ++        +LR G        T L+ A+  R  L  AF  F +M              
Sbjct: 187 VQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMS------------- 233

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
                                +EE   PN  TY+ILI+  C AG  +EA +L +EM+++ 
Sbjct: 234 ---------------------KEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKG 272

Query: 694 IEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLGA 728
            +P   T++ L+  + D      A++ L+ +   A
Sbjct: 273 CQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKA 307


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 191/629 (30%), Positives = 313/629 (49%), Gaps = 18/629 (2%)

Query: 90  PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVET 149
           P L  +++        + +RFF+WV  Q     D      +L +L+   L   A   V  
Sbjct: 3   PHLAGKIIGLQSNNVELGVRFFKWVCRQSSYCYDLDGRIQLLGVLVSRDLFGVAQKAVVL 62

Query: 150 VV---------CVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKML 200
           ++          V + G LD +   G    +S      LL+   K +M     LV+ +M+
Sbjct: 63  LIQECEDSENGVVKLMGALDGMTELGFR--LSYPCYSTLLMCLAKLNMGFVAFLVYRRMV 120

Query: 201 RNGLLPDVKNCNRIIKVLRDNGFSVKAREVY---RMMGEFGIKPSIVTYNTMLDSFCKEG 257
             G +    +   ++  L  NGF V+A E++    +   FG+   + T  +++ + C+  
Sbjct: 121 NEGFVLGGIDYRTVVNALCKNGF-VQAAEMFCCKVLRLGFGLDTHVCT--SLVLANCRRD 177

Query: 258 EMQEALELLWEM-QGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSY 316
           ++ EA  +  +M +   C PN VTY++LI G    G LE+A  L ++M++ G + S  +Y
Sbjct: 178 DLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTY 237

Query: 317 NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
             +I    + G+  +A+ + +EM T+   P + TY ILI  LC+ G++ +A   F +ML+
Sbjct: 238 TVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLK 297

Query: 377 KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
             + P II++N L+ GYC+ G +  AF L   +   N  P + TYN L++GLCR      
Sbjct: 298 HGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYK 357

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
           A  L   +++ G+LPD +TY I+V+G CK G L+MA   FN M   GL+PD F +T  I 
Sbjct: 358 AFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALID 417

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
           G  KLG   +A  +   M+ KG   D +T+  L+ G CK+G  ++   L   MV +  + 
Sbjct: 418 GLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLT 477

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
              T+   + A  +   L     +   M++ GL P++VT+T+LI  H   G   L+    
Sbjct: 478 TAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKML 537

Query: 617 SEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNA 676
             M+  G  PNV TY  +INGLC   R+++A  +   M   G+ PN +TY +L+  +  A
Sbjct: 538 ERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKA 597

Query: 677 GNWQEALRLYKEMLDREIEPDYCTHSALL 705
           G    A ++   M+    +P+   +SALL
Sbjct: 598 GRLDRAFQIVSTMVKNGCQPNSHIYSALL 626



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 160/622 (25%), Positives = 273/622 (43%), Gaps = 68/622 (10%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVV---CVNMHGILDVLI 163
           A R F  +  +   + +   +  ++  L E+G L  A+ + + +V   C        VLI
Sbjct: 182 AFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLI 241

Query: 164 GGGLSSCVSIKILDLLLLIYTKKSM------------------VEQCLLVFNKMLRNGLL 205
                  ++ K + +L  + TK  +                  +E+   VF KML++GL 
Sbjct: 242 KAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLC 301

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P +   N +I      G+ V A ++  +M +   KP+I TYN +++  C+  +  +A  L
Sbjct: 302 PGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLL 361

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           L  +   G  P+ VTYN+L+ GF + G+L  A  +   M   GL+    ++  +I G  +
Sbjct: 362 LRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCK 421

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
            G L +A  +   MV +G++    T+  LI G CK G+  D    F  M+    +    +
Sbjct: 422 LGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHT 481

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           +N  L    +   + EA  +  ++    LVP+VVT+  LI+G CR G+  ++ ++ E M 
Sbjct: 482 FNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMK 541

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
             G  P+V TYTI++NG C  G +  A      M   G+ P+ F Y   +   +K G   
Sbjct: 542 QAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLD 601

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
            A+++   M+  G  P+   Y+ L+                      GF+   ++ T+I 
Sbjct: 602 RAFQIVSTMVKNGCQPNSHIYSALL---------------------SGFV---LSNTAIG 637

Query: 566 HASL-EMGDLRRGRDLF-----NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
             +L   GDL   R L      NN L   +      + ++   HA + R         E+
Sbjct: 638 ARALSSTGDL-DARSLSSEENDNNCLSSHV------FRLMDVDHALKIR--------DEI 682

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
           +  G+ P    YN L+ GLC+  RI +A  L  DM + G+ P+K   +I I   C    +
Sbjct: 683 KKCGV-PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSI-IEHYCKTCKY 740

Query: 680 QEALRLYKEMLDREIEPDYCTH 701
              L   K +LD +  P + ++
Sbjct: 741 DNCLEFMKLVLDNKFVPSFASY 762



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 117/239 (48%), Gaps = 1/239 (0%)

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
            Y+T +    KL     A+ +   M+ +GF    I Y  +V+ LCK G ++ A     K+
Sbjct: 95  CYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKV 154

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK-GLSPTLVTYTVLIHAHAARGR 608
           +  GF  D    TS++ A+    DL     +F  M ++    P  VTY++LIH     GR
Sbjct: 155 LRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGR 214

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           LE AF    EM  KG +P+  TY  LI   C +   D+A  +  +M  +  +PN +TYTI
Sbjct: 215 LEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTI 274

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLG 727
           LI+  C  G  +EA  ++++ML   + P   T +AL+     + + V A + L  +  G
Sbjct: 275 LIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKG 333



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 89/215 (41%), Gaps = 34/215 (15%)

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           M   GF      Y+ L+  L KL     A  + R+MV +GF+   I Y ++++A  + G 
Sbjct: 84  MTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGF 143

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
           ++        +LR G        T L+ A+  R  L  AF  F +M              
Sbjct: 144 VQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMS------------- 190

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
                                +EE   PN  TY+ILI+  C AG  +EA +L +EM+++ 
Sbjct: 191 ---------------------KEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKG 229

Query: 694 IEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLGA 728
            +P   T++ L+  + D      A++ L+ +   A
Sbjct: 230 CQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKA 264


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  310 bits (793), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 173/539 (32%), Positives = 288/539 (53%), Gaps = 19/539 (3%)

Query: 203 GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           G  P +   N ++  L D      AR +   M   G+ P++ TYN ++ + C  G+ +EA
Sbjct: 115 GYAPSLLAYNAVLLALSDASLP-SARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173

Query: 263 LELLWE-MQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC 321
           L ++ + M+G GC+PN VTYN L+  F R GE++ A  L+  M + G++ S  ++N ++ 
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           G  + G + +A  + +EM   G+ P   +YN L+ G CK G + +A   F EM +K V+P
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVP 293

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           D++++ +L++  CR+GN+  A  L  ++R R L     T+  LIDG CR G L+ A    
Sbjct: 294 DVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAM 353

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
           + M    I P V+ Y +++NG CK+G +  ARE  +EM  KG++PD   Y+T ++G  K+
Sbjct: 354 KEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKI 413

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
           GDT  A+ L  +ML KG  PD ITY+ L+ GLC+   L +A EL  KM+  G  PD  TY
Sbjct: 414 GDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTY 473

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
           T++I    + G++++   L + M++KG+ P +VTY+VLI   +   R + A     ++  
Sbjct: 474 TTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYY 533

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP----------------NKYT 665
           +   P+ I Y AL++  CR         L      +G++                 +   
Sbjct: 534 EDPVPDNIKYEALMH-CCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSV 592

Query: 666 YTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           Y++LI+ +C  GN  +AL  +K++L     P+  +  +L+    ++   V A   ++ L
Sbjct: 593 YSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQEL 651



 Score =  272 bits (695), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 157/498 (31%), Positives = 254/498 (51%), Gaps = 57/498 (11%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE----FGIKPSIVTYNTML 250
           +   MLR+G+ P+V   N +++ L   G   +  E   ++G+     G  P++VTYNT++
Sbjct: 141 LLASMLRDGVAPNVYTYNILVRALCARG---QREEALGVVGDDMRGAGCAPNVVTYNTLV 197

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
            +FC+ GE+  A  L+  M+  G  P+ VT+N ++ G  + G +E AR +  +M + GL 
Sbjct: 198 AAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLT 257

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA--- 367
               SYN ++ GY + G L EAL +  EM  +GV P + T+  LI+ +C+ G +  A   
Sbjct: 258 PDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVAL 317

Query: 368 ------------------------RHRFF--------EMLRKNVIPDIISYNTLLYGYCR 395
                                   R+ F         EM    + P ++ YN L+ GYC+
Sbjct: 318 VGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCK 377

Query: 396 SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
            G + EA  L  E+ ++ + P VVTY+T++ G C+ GD + A +L   M+ +G++PD IT
Sbjct: 378 LGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAIT 437

Query: 456 YTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML 515
           Y+ ++ G C+   L  A E F +ML+ GLQPD F YTT I G  K G+  +A  L +EM+
Sbjct: 438 YSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMI 497

Query: 516 AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM---- 571
            KG  PD++TY+VL+ GL K    +EA  LL K+  +  +PD+I Y +++H         
Sbjct: 498 KKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKS 557

Query: 572 -----------GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
                      G + +   ++ +ML +        Y+VLIH H   G +  A  +  ++ 
Sbjct: 558 VVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLL 617

Query: 621 VKGIRPNVITYNALINGL 638
             G  PN  +  +L+ GL
Sbjct: 618 RCGFSPNSTSTISLVRGL 635



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 188/383 (49%), Gaps = 50/383 (13%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K   + + L VF +M + G++PDV     +I  +   G   +A  +   M E G++ +
Sbjct: 270 YCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMN 329

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             T+  ++D FC+ G + +AL  + EM+     P+ V YNVLI G+ + G +++AR LI 
Sbjct: 330 EFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIH 389

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M   G+K    +Y+ I+ GY + G    A  L  +M+ +GV P   TY+ LI GLC+  
Sbjct: 390 EMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEER 449

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R+ DA   F +ML+  + PD  +Y TL+ G+C+ GN+ +A  L DE+  + ++P VVTY+
Sbjct: 450 RLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYS 509

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVI---------------------------- 454
            LIDGL +    + AQ+L   +  +  +PD I                            
Sbjct: 510 VLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKG 569

Query: 455 ----------------------TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
                                  Y+++++G C+ GN+  A  F  ++LR G  P+  +  
Sbjct: 570 LMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTI 629

Query: 493 TQIAGELKLGDTSEAYRLQEEML 515
           + + G  + G T EA  + +E+L
Sbjct: 630 SLVRGLFEEGMTVEADNVIQELL 652



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 92/352 (26%), Positives = 156/352 (44%), Gaps = 52/352 (14%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVE---------TVVCVNMHGILDVLIGG---- 165
           G++ +EF F  +++    +G L  A   ++         +VVC N      VLI G    
Sbjct: 325 GLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYN------VLINGYCKL 378

Query: 166 ----------------GLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVK 209
                           G+     +     +L  Y K    +    +  KML+ G++PD  
Sbjct: 379 GRMDEARELIHEMEAKGMKP--DVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAI 436

Query: 210 NCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM 269
             + +I+ L +      A E++  M + G++P   TY T++D  CKEG +Q+AL L  EM
Sbjct: 437 TYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEM 496

Query: 270 QGRGCSPNGVTYNVLITGFSRNGELEQARGLI-----RDMLKLGLKVSA----------H 314
             +G  P+ VTY+VLI G S++   ++A+ L+      D +   +K  A           
Sbjct: 497 IKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFK 556

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           S   ++ G+S KGL+ +A  + + M+ R      + Y++LI+G C+ G +  A     ++
Sbjct: 557 SVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQL 616

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
           LR    P+  S  +L+ G    G   EA  +  EL +   +    T   LID
Sbjct: 617 LRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELLNCCSLADAETSKALID 668


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  310 bits (793), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 183/644 (28%), Positives = 324/644 (50%), Gaps = 10/644 (1%)

Query: 89  DPELLVRVLNRIREKPRIALRFFRWVETQ-PGVKRDEFVFCTILEILIESGLLRSAYWVV 147
           +P  +V VL R R    +  RF   +    P  K        ++ IL+ SG L  A   V
Sbjct: 67  NPLAVVEVLYRCRNDLSLGQRFVDQLGFNFPNFKHTSLSLSAMIHILVRSGRLSDAQSCV 126

Query: 148 ETVVCVNMHGILDVLIGGGLSSCVS-----IKILDLLLLIYTKKSMVEQCLLVFNKMLRN 202
             +  +   G+  V I   L S  S       + DLL+  + +   + +    F  +   
Sbjct: 127 --LRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVFDLLIRTFVQARKLREAYEAFTLLRSK 184

Query: 203 GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           G    +  CN +I  L   G+   A  +Y+ +   G+  ++ T N M+++ CK+G+M++ 
Sbjct: 185 GYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKV 244

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
              L E+Q +G  P+ VTYN LI+ +S  G +E+A  L+  M   G     ++YN +I G
Sbjct: 245 GTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVING 304

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
             + G    A  +  EM+  G++P   TY  L+   CK G   +  + F +M  ++V+PD
Sbjct: 305 LCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPD 364

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
           ++ +++++  + RSGN+ +A + F+ ++   L+P  V Y  LI G CR G +  A  L+ 
Sbjct: 365 LVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRN 424

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            M+ QG   DV+TY  +++G CK   L  A + FNEM  +GL PD +  T  I G  KLG
Sbjct: 425 EMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLG 484

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
           +   A  L ++M  K    D++TYN L+ G  K+G ++ A E+   MV    +P  I+++
Sbjct: 485 NLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFS 544

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
            +++A    G L     +++ M+ K + PT++    +I  +   G      ++  +M  +
Sbjct: 545 ILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISE 604

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE--GILPNKYTYTILINENCNAGNWQ 680
           G  P+ I+YN LI G  +   + +A+GL   MEE+  G++P+ +TY  +++  C     +
Sbjct: 605 GFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMK 664

Query: 681 EALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           EA  + ++M++R + PD  T+++L+   + +D    A  + + +
Sbjct: 665 EAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEM 708



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 136/452 (30%), Positives = 237/452 (52%), Gaps = 37/452 (8%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           + L+  Y+ + ++E+   + + M   G  P V   N +I  L  +G   +A+EV+  M  
Sbjct: 264 NTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLR 323

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G+ P   TY ++L   CK+G+  E   +  +M+ R   P+ V ++ +++ F+R+G L++
Sbjct: 324 SGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDK 383

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A      + + GL      Y  +I GY  KG++ EA+NL  EM+ +G A  + TYN +++
Sbjct: 384 ALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILH 443

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           GLCK   + +A   F EM  + + PD  +   L+ G+C+ GN+  A  LF +++ + +  
Sbjct: 444 GLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKL 503

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
            VVTYNTL+DG  + GD++ A+++  +M+++ ILP  I+++I+VN  C  G+LS A   +
Sbjct: 504 DVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVW 563

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV------ 530
           +EM+ K ++P      + I G  + G+ S+     E+M+++GF PD I+YN L+      
Sbjct: 564 DEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKE 623

Query: 531 -------------------------------HGLCKLGSLEEANELLRKMVGDGFIPDHI 559
                                          HG C+   ++EA  +LRKM+  G  PD  
Sbjct: 624 ENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRS 683

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           TYTS+I+  +   +L       + ML++G SP
Sbjct: 684 TYTSLINGFVSQDNLTEAFRFHDEMLQRGFSP 715



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 107/346 (30%), Positives = 191/346 (55%), Gaps = 2/346 (0%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           ++ ++T+   +++ L+ FN +   GL+PD      +I+     G   +A  +   M + G
Sbjct: 371 MMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQG 430

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
               +VTYNT+L   CK   + EA +L  EM  RG  P+  T  +LI G  + G L+ A 
Sbjct: 431 CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAM 490

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L + M +  +K+   +YN ++ G+ + G +  A  +  +MV++ + PT  +++IL+  L
Sbjct: 491 ELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNAL 550

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C  G +S+A   + EM+ K++ P ++  N+++ GYCRSGN  +  +  +++ S   VP  
Sbjct: 551 CSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDC 610

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQ--GILPDVITYTIMVNGSCKMGNLSMAREFF 476
           ++YNTLI G  +  ++  A  L + M  +  G++PDV TY  +++G C+   +  A    
Sbjct: 611 ISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVL 670

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            +M+ +G+ PDR  YT+ I G +   + +EA+R  +EML +GF PD
Sbjct: 671 RKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 103/315 (32%), Positives = 176/315 (55%), Gaps = 2/315 (0%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           I  +L+  Y +K M+ + + + N+ML+ G   DV   N I+  L       +A +++  M
Sbjct: 402 IYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM 461

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
            E G+ P   T   ++D  CK G +Q A+EL  +M+ +    + VTYN L+ GF + G++
Sbjct: 462 TERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDI 521

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           + A+ +  DM+   +  +  S++ ++     KG L EA  + +EM+++ + PT+   N +
Sbjct: 522 DTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSM 581

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN- 413
           I G C+ G  SD      +M+ +  +PD ISYNTL+YG+ +  N+ +AF L  ++  +  
Sbjct: 582 IKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQG 641

Query: 414 -LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
            LVP V TYN+++ G CR   ++ A+ +   MI +G+ PD  TYT ++NG     NL+ A
Sbjct: 642 GLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEA 701

Query: 473 REFFNEMLRKGLQPD 487
             F +EML++G  PD
Sbjct: 702 FRFHDEMLQRGFSPD 716


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  310 bits (793), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 187/646 (28%), Positives = 325/646 (50%), Gaps = 41/646 (6%)

Query: 101 REKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESG-LLRSAYWVVETVVCVNMHGIL 159
           +  P  AL +F+ +E   G  R     C +L IL  S   L+ A  ++   +  +   + 
Sbjct: 95  KRDPYSALTYFKQLECTRGFVRSLDSLCVLLHILTRSSETLKQAQNLLNRFISGDSGPMP 154

Query: 160 DVLIGGGLSSC------VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNR 213
           ++L+   + S         I+I + LL  Y K + +   +  FN+++ + ++P +K  N 
Sbjct: 155 NILVDHFIGSTKRFDFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNF 214

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
           ++  L  N    +AREVY  M   G+     T + M+ +  K+   +EA +   E + RG
Sbjct: 215 LLTALVKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRG 274

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
              +   Y+++I  F +N ++E A GL++DM   G   S  ++  +I    ++G +VEAL
Sbjct: 275 VKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEAL 334

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
            L++EMV+ GV   +     L+ G CK  ++  A   F +M      P+ ++Y  L+   
Sbjct: 335 RLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWC 394

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTV----------------------------------V 419
           C++GN+ +A+ L+ +++++N+ PTV                                   
Sbjct: 395 CKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIANIF 454

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
           TYN+L+  LC+ G +  A  L + M+++G+ P  ++Y  M+ G C+ GNL MA   F++M
Sbjct: 455 TYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDM 514

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
           L  GL+P+   Y+  + G  K GDT  A+ + + M+ +   P   TYN+ ++GLCK+G  
Sbjct: 515 LDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRT 574

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
            EA ++L+K V  GF+P  +TY SI+   ++ G +      +  M   G+SP ++TYT L
Sbjct: 575 SEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTL 634

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           I+        +LA    +EM+ KG+  ++  Y ALI+G C+ + I+ A  LF ++ + G+
Sbjct: 635 INGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGL 694

Query: 660 LPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            PN   Y  LI+   N  N + AL L K ML   I  D  T++ L+
Sbjct: 695 SPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLI 740



 Score =  301 bits (771), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 194/609 (31%), Positives = 310/609 (50%), Gaps = 36/609 (5%)

Query: 107 ALRFFRWVETQPGVKRDEFV-------FCTILEILIESGLL---RSAYWVVETVVCVNMH 156
           A +FF   +++ GVK D          FC  L++ +  GLL   R   WV          
Sbjct: 263 AKKFFLEAKSR-GVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPS-------E 314

Query: 157 GILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK 216
           G    +IG    +CV             + +MVE  L + ++M+  G+  +V     ++K
Sbjct: 315 GTFTSVIG----ACVK------------QGNMVE-ALRLKDEMVSCGVQMNVVVATTLVK 357

Query: 217 VLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSP 276
                   V A E +  M E G  P+ VTY  +++  CK G M +A +L  +M+ +   P
Sbjct: 358 GYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICP 417

Query: 277 NGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLE 336
                N LI GF +    E+A  L  + +   +  +  +YN ++    ++G + EA  L 
Sbjct: 418 TVFIVNSLIRGFLKVESREEASKLFDEAVACDI-ANIFTYNSLLSWLCKEGKMSEATTLW 476

Query: 337 EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS 396
           ++M+ +G+APT  +YN +I G C+ G +  A   F +ML   + P++I+Y+ L+ GY ++
Sbjct: 477 QKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKN 536

Query: 397 GNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
           G+   AF +FD +   N+VP+  TYN  I+GLC+ G    AQ + +  + +G +P  +TY
Sbjct: 537 GDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTY 596

Query: 457 TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA 516
             +++G  K G++S A   + EM   G+ P+   YTT I G  K  +T  A +++ EM  
Sbjct: 597 NSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRN 656

Query: 517 KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
           KG   D+  Y  L+ G CK   +E A+ L  +++  G  P+ + Y S+I     + ++  
Sbjct: 657 KGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEA 716

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
             +L   ML +G+S  L TYT LI      GRL LA   +SEM  KGI P++I Y  LIN
Sbjct: 717 ALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLIN 776

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
           GLC   +++ A  +  +ME + I PN   Y  LI  +  AGN QEA RL+ EMLD+ + P
Sbjct: 777 GLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTP 836

Query: 697 DYCTHSALL 705
           +  T+  L+
Sbjct: 837 NDTTYDILI 845



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 161/325 (49%), Gaps = 1/325 (0%)

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           DI  YN LL  Y ++  + +A   F+ L   ++VP +   N L+  L +   +  A+++ 
Sbjct: 173 DIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVY 232

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
           E M+ +G+  D  T  IM+  + K  N   A++FF E   +G++ D  AY+  I    K 
Sbjct: 233 EKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKN 292

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
            D   A  L ++M  KG+ P   T+  ++    K G++ EA  L  +MV  G   + +  
Sbjct: 293 LDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVA 352

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
           T+++    +   L    + F+ M   G SP  VTY VLI      G +  A+  +++M+ 
Sbjct: 353 TTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKN 412

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
           K I P V   N+LI G  ++   ++A  LF D      + N +TY  L++  C  G   E
Sbjct: 413 KNICPTVFIVNSLIRGFLKVESREEASKLF-DEAVACDIANIFTYNSLLSWLCKEGKMSE 471

Query: 682 ALRLYKEMLDREIEPDYCTHSALLL 706
           A  L+++MLD+ + P   ++++++L
Sbjct: 472 ATTLWQKMLDKGLAPTKVSYNSMIL 496



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 101/207 (48%), Gaps = 2/207 (0%)

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL-RRG 577
           F  D+  YN L++   K   L +A     ++V    +P  I + + +  +L   D+    
Sbjct: 170 FDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVP-WIKFLNFLLTALVKNDMIYEA 228

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
           R+++  M+ KG+     T  +++ A+      E A  +F E + +G++ +   Y+ +I  
Sbjct: 229 REVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQA 288

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
            C+   ++ A GL  DM ++G +P++ T+T +I      GN  EALRL  EM+   ++ +
Sbjct: 289 FCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMN 348

Query: 698 YCTHSALLLKQLDKDYKVHAVEYLESL 724
               + L+     +D  V A+E+ + +
Sbjct: 349 VVVATTLVKGYCKQDKLVSALEFFDKM 375


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  310 bits (793), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 176/507 (34%), Positives = 273/507 (53%), Gaps = 7/507 (1%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMGEFGIKPSIVTYNTMLDSF 253
            F  +L+ G   D    N+++K L D     +A  V  R M E G +  +V+YNT+L   
Sbjct: 106 AFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGL 165

Query: 254 CKEGEMQEALELLWEM---QGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
           C     +EA ELL  M   Q   CSP+ V+YN++I GF   G++++A  L    L++G+ 
Sbjct: 166 CDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLF---LEMGVS 222

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
               +YN II G  +   +  A ++ ++MV +GV P   TYN +I GLCK   V  A   
Sbjct: 223 PDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGV 282

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
           F +M+ K V P  ++YNT++ G C++  +  A  +F ++  R + P  VTYNT+IDGLC+
Sbjct: 283 FQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCK 342

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
              ++ A+ + + MI++G+ PD +TYTI+++G CK  ++  A   F +M+ KG++P+   
Sbjct: 343 AQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGT 402

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           Y   I G L  G   E  +  +EM A    PD+ TY +L+  LCK G   EA  L   M+
Sbjct: 403 YNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMI 462

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
             G  P    Y  ++H   + G L    DL N M+  G+SP    +  +I A+A R  ++
Sbjct: 463 RKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMID 522

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
                F +M+ +G+ PNV+TY  LI+ LC+L R+D A   F  M  EG+ PN   +  L+
Sbjct: 523 EVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLV 582

Query: 671 NENCNAGNWQEALRLYKEMLDREIEPD 697
              C    W++   L+ EML++ I PD
Sbjct: 583 YGLCTVDKWEKVEELFLEMLNQGIRPD 609



 Score =  296 bits (759), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 174/550 (31%), Positives = 292/550 (53%), Gaps = 6/550 (1%)

Query: 158 ILDVLIGGGLSSCVSIKILDLLLLI--YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRII 215
           +L +++ G  SSC S  ++   ++I  +  +  V++   +F +M   G+ PDV   N II
Sbjct: 177 LLHMMVDGQDSSC-SPDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTII 232

Query: 216 KVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCS 275
             L       +A +V++ M E G+KP+ VTYNT++D  CK  E+  A  +  +M  +G  
Sbjct: 233 DGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVK 292

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           P+ VTYN +I G  +   +++A G+ + M+  G+K    +YN II G  +   + +A  +
Sbjct: 293 PSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGV 352

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
            ++M+ +GV P   TY I+I GLCK   V  A   F +M+ K V P+  +YN L++GY  
Sbjct: 353 FQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLS 412

Query: 396 SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
           +G   E      E+ + +L P V TY  L+D LC+ G    A+ L ++MI +GI P V  
Sbjct: 413 TGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTI 472

Query: 456 YTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML 515
           Y IM++G  K G LS   +  N M+  G+ P+   + T I    K     E   +  +M 
Sbjct: 473 YGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMK 532

Query: 516 AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLR 575
            +G  P+++TY  L+  LCKLG +++A     +M+ +G  P+++ + S+++    +    
Sbjct: 533 QQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWE 592

Query: 576 RGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALI 635
           +  +LF  ML +G+ P +V +  ++      GR+  A      M   G++P+VI+YN LI
Sbjct: 593 KVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLI 652

Query: 636 NGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIE 695
           +G C   R+D+A  L   M   G+ PN  +Y  L++  C AG    A  L++EML + + 
Sbjct: 653 DGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVT 712

Query: 696 PDYCTHSALL 705
           P   T++ +L
Sbjct: 713 PGVETYNTIL 722



 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 154/540 (28%), Positives = 276/540 (51%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   +++   VF +M+  G+ PD      II  L       +A  V++ M + G+KP+  
Sbjct: 342 KAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNG 401

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TYN ++  +   G+ +E ++ + EM      P+  TY +L+    +NG+  +AR L   M
Sbjct: 402 TYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSM 461

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           ++ G+K S   Y  ++ GY +KG L E  +L   MV  G++P    +N +I    K   +
Sbjct: 462 IRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMI 521

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            +  H F +M ++ + P++++Y TL+   C+ G + +A L F+++ +  + P  V +N+L
Sbjct: 522 DEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSL 581

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           + GLC     E  ++L   M+NQGI PD++ +  ++   CK G +  AR   + M+  GL
Sbjct: 582 VYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGL 641

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
           +PD  +Y T I G        EA +L + M++ G  P++++YN L+HG CK G ++ A  
Sbjct: 642 KPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYC 701

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           L R+M+  G  P   TY +I++     G     R+L+ NM++     ++ TY++++    
Sbjct: 702 LFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFC 761

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
                + AF  F  +    ++ ++IT+N +I+GL +  R + A  LF  +   G++P+  
Sbjct: 762 KNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVV 821

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           TY ++       G+ +E   L+  M      P+    +AL+ K LD+     A  YL  L
Sbjct: 822 TYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKL 881



 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 161/601 (26%), Positives = 292/601 (48%), Gaps = 18/601 (2%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGL--SSCVSIKIL 176
           GVK D   + TI++ L ++  +  A             G+   +I  G+   +     I+
Sbjct: 325 GVKPDHVTYNTIIDGLCKAQAIDKA------------EGVFQQMIDKGVKPDNLTYTIII 372

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           D L     K   V++   VF +M+  G+ P+    N +I      G   +  +  + M  
Sbjct: 373 DGL----CKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSA 428

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
             ++P + TY  +LD  CK G+  EA  L   M  +G  P+   Y +++ G+ + G L +
Sbjct: 429 HDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSE 488

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
              L+  M+  G+  +   +N +IC Y+++ ++ E +++  +M  +G++P + TY  LI 
Sbjct: 489 MHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLID 548

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
            LCK GRV DA  +F +M+ + V P+ + +N+L+YG C      +   LF E+ ++ + P
Sbjct: 549 ALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRP 608

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
            +V +NT++  LC+ G +  A++L ++M+  G+ PDVI+Y  +++G C    +  A +  
Sbjct: 609 DIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLL 668

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           + M+  GL+P+  +Y T + G  K G    AY L  EML KG  P + TYN +++GL + 
Sbjct: 669 DGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRS 728

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G   EA EL   M+    +    TY+ I+    +         +F ++    L   ++T+
Sbjct: 729 GRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITF 788

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
            ++I      GR E A   F+ +   G+ P+V+TY  +   L     +++   LF  ME+
Sbjct: 789 NIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEK 848

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVH 716
            G  PN +    LI +  + G    A     ++ ++    +  T S L+     ++Y+ H
Sbjct: 849 SGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSREEYQQH 908

Query: 717 A 717
           A
Sbjct: 909 A 909



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 143/448 (31%), Positives = 224/448 (50%), Gaps = 18/448 (4%)

Query: 287 GFSRNGEL--EQARGLIRDMLKLGLKVSAHSYNPII-------CGYSEKGLLVEALNLEE 337
           G +R+G L    A  L  ++L      S  + N ++       C  S K L V   N   
Sbjct: 15  GRARSGNLGLHDALKLFDELLLHARPASVRALNQLLSVVSRAKCSSSSK-LAVSRFNRML 73

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
              +  VAP   TY+I+I   C+ GR+      F  +L+     D I  N LL G C + 
Sbjct: 74  RDCSNKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTK 133

Query: 398 NIGEAF-LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI---NQGILPDV 453
            +GEA  +L  ++        VV+YNTL+ GLC     E A++L   M+   +    PDV
Sbjct: 134 RVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDV 193

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
           ++Y I++NG    G +  A   F EM   G+ PD   Y T I G  K  +   A  + ++
Sbjct: 194 VSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQ 250

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           M+ KG  P+ +TYN ++ GLCK   ++ A  + +KMV  G  P ++TY +II    +   
Sbjct: 251 MVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQA 310

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
           + R   +F  M+ +G+ P  VTY  +I        ++ A   F +M  KG++P+ +TY  
Sbjct: 311 VDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTI 370

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
           +I+GLC+ + +D+A G+F  M ++G+ PN  TY  LI+   + G W+E ++  KEM   +
Sbjct: 371 IIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHD 430

Query: 694 IEPDYCTHSALLLKQLDKDYKVHAVEYL 721
           +EPD  T+  LLL  L K+ K +    L
Sbjct: 431 LEPDVFTY-GLLLDYLCKNGKCNEARSL 457



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 72/324 (22%), Positives = 145/324 (44%), Gaps = 14/324 (4%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G++ D   F T+L  L + G +  A  +++++VC+ +    DV+              + 
Sbjct: 605 GIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKP--DVIS------------YNT 650

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  +   S +++ + + + M+  GL P++ + N ++      G    A  ++R M   G
Sbjct: 651 LIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKG 710

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           + P + TYNT+L+   + G   EA EL   M       +  TY++++ GF +N   ++A 
Sbjct: 711 VTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAF 770

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            + + +  + L++   ++N +I G  + G   +A++L   +   G+ P++ TY ++   L
Sbjct: 771 KIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENL 830

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
            + G + +    F  M +    P+    N L+      G I  A     +L  +N     
Sbjct: 831 IEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEA 890

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKE 442
            T + LI    R    + A+ L E
Sbjct: 891 STTSMLISLFSREEYQQHAKSLPE 914



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 38/167 (22%), Positives = 75/167 (44%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           SI    ++L  + K +  ++   +F  +    L  D+   N +I  L   G    A +++
Sbjct: 749 SICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLF 808

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             +   G+ PS+VTY  + ++  +EG ++E   L   M+  G +PN    N LI      
Sbjct: 809 AAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDR 868

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
           GE+ +A   +  + +    + A + + +I  +S +     A +L E+
Sbjct: 869 GEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSREEYQQHAKSLPEK 915


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 202/680 (29%), Positives = 333/680 (48%), Gaps = 36/680 (5%)

Query: 64  STVEEKPWAFCNNRWVSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRD 123
           S + +K   F        H  +    PE    +L + +    + L+F  W    P     
Sbjct: 22  SLLADKALTFLKRHPYQLHHLSANFTPEAASNLLLKSQNNQELILKFLTWA--NPHQFFT 79

Query: 124 EFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSI-----KILDL 178
               C  L IL    L ++A  + E V    +      L+   L     +      + DL
Sbjct: 80  LRCKCITLHILTRFKLYKTAQTLAEDVAAKTLDDEDASLVFRSLQETYDLCNSTSSVFDL 139

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRI----IKVLRDNGFSVKAREVYRMM 234
           ++  Y++  ++++ L + +    +G +P V + N +    I+  R+  F   A  V++ M
Sbjct: 140 VVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISF---AENVFKEM 196

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
            +  + P++ TYN ++  FC  G +  AL     M+ +GC PN VTYN LI G+ +  ++
Sbjct: 197 LQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKI 256

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           +    L+R M   GL+ +  SYN +I G   +G + E   +  EM  RG +    TYN L
Sbjct: 257 DDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTL 316

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           I G CK G    A     EMLR  + P +I+Y +L++  C++GN+  A    D++R R L
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGL 376

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P   TY TL+DG  + G +  A ++ + MI+ G  P V+TY  ++NG C  G +  A  
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIA 436

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
              +M  KGL PD  +Y+T ++G  +  D  EA R++ +M+AKG  PD ITY+ L+ G C
Sbjct: 437 VLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFC 496

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           +    +EA +L  +M+  G  PD  TYT++I+A    GDL++   L N M+ KG+ P +V
Sbjct: 497 EQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVV 556

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN---------------ALINGLC 639
           TY+VLI+    + R   A     ++  +   P+ +TY+               +LI G C
Sbjct: 557 TYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFC 616

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
               + +A  +F  M E+   P+   Y ++I+ +C  G+ ++A  LYKEM    ++  + 
Sbjct: 617 MKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEM----VKSGFL 672

Query: 700 THSAL---LLKQLDKDYKVH 716
            H+     L+K L K+ KV+
Sbjct: 673 LHTVTVIALVKTLHKEGKVN 692



 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 163/525 (31%), Positives = 270/525 (51%), Gaps = 25/525 (4%)

Query: 193 LLVFNKMLRNGLLPDVKNCNRIIK---VLR--DNGFSVKAREVYRMMGEFGIKPSIVTYN 247
           L  F++M + G LP+V   N +I     LR  D+GF     E+ R M   G++P++++YN
Sbjct: 225 LRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGF-----ELLRSMALKGLEPNLISYN 279

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
            +++  C+EG M+E   +L EM  RG S + VTYN LI G+ + G   QA  +  +ML+ 
Sbjct: 280 VVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRH 339

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           GL  S  +Y  +I    + G +  A    ++M  RG+ P   TY  L+ G  + G +++A
Sbjct: 340 GLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 399

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
                EM+     P +++YN L+ G+C +G + +A  + ++++ + L P VV+Y+T++ G
Sbjct: 400 YRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSG 459

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
            CR  D++ A ++K  M+ +GI PD ITY+ ++ G C+      A + F+EMLR GL PD
Sbjct: 460 FCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPD 519

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
            F YT  I      GD  +A +L  EM+ KG  PD++TY+VL++GL K     EA  LL 
Sbjct: 520 EFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLL 579

Query: 548 KMVGDGFIPDHITYTSIIH--ASLEM-------------GDLRRGRDLFNNMLRKGLSPT 592
           K+  +  +P  +TY ++I   +++E              G +     +F +ML K   P 
Sbjct: 580 KLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPD 639

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
              Y V+IH H   G +  A+  + EM   G   + +T  AL+  L +  ++++   +  
Sbjct: 640 GTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIA 699

Query: 653 DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           ++     L       +L+  N   GN    L +  EM      P+
Sbjct: 700 NVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/279 (31%), Positives = 141/279 (50%), Gaps = 1/279 (0%)

Query: 447 QGILPDVITYTIMVNGSCKMG-NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
            G +P V++Y  +++ + +   N+S A   F EML+  + P+ F Y   I G    G+  
Sbjct: 163 HGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLD 222

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
            A R  + M  KG  P+++TYN L+ G CKL  +++  ELLR M   G  P+ I+Y  +I
Sbjct: 223 VALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVI 282

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
           +     G ++    +   M ++G S   VTY  LI  +   G    A +  +EM   G+ 
Sbjct: 283 NGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLS 342

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           P+VITY +LI+ +C+   +++A      M   G+ PN+ TYT L++     G   EA R+
Sbjct: 343 PSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRV 402

Query: 686 YKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
            KEM+D    P   T++AL+         V A+  LE +
Sbjct: 403 LKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDM 441



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/355 (26%), Positives = 160/355 (45%), Gaps = 50/355 (14%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           +++K  + +   V  +M+ NG  P V   N +I      G  V A  V   M E G+ P 
Sbjct: 390 FSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPD 449

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +V+Y+T+L  FC+  ++ EAL +  +M  +G  P+ +TY+ LI GF      ++A  L  
Sbjct: 450 VVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFD 509

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL---- 358
           +ML++GL     +Y  +I  Y  +G L +A+ L  EMV +GV P + TY++LI GL    
Sbjct: 510 EMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQA 569

Query: 359 ----------------------------------------------CKWGRVSDARHRFF 372
                                                         C  G +++A   F 
Sbjct: 570 RTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFE 629

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
            ML KN  PD  +YN +++G+CR G+I +A+ L+ E+     +   VT   L+  L + G
Sbjct: 630 SMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEG 689

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
            +     +  N++    L +     ++V  + + GN+ +  +   EM + G  P+
Sbjct: 690 KVNELNSVIANVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 184/639 (28%), Positives = 325/639 (50%), Gaps = 11/639 (1%)

Query: 89  DPELLVRVLNRIREKPRIALRFFRWVETQ-PGVKRDEFVFCTILEILIESGLLRSAYWVV 147
           +P  +V VL R R    +  RF   +    P  K        ++ IL+ SG L  A   +
Sbjct: 77  NPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQSCL 136

Query: 148 ETVVCVNMHGILDVL--IGGGLSSCVS-IKILDLLLLIYTKKSMVEQCLLVFNKMLRNGL 204
             ++  +    L+++  +    S+C S   + DLL+  Y +   + +    F  +   G 
Sbjct: 137 LRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGF 196

Query: 205 LPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALE 264
              +  CN +I  L   G+   A  VY+ +   G+  ++ T N M+++ CK+G+M++   
Sbjct: 197 TVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGT 256

Query: 265 LLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYS 324
            L ++Q +G  P+ VTYN LI+ +S  G +E+A  L+  M   G     ++YN +I G  
Sbjct: 257 FLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLC 316

Query: 325 EKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDII 384
           + G    A  +  EM+  G++P   TY  L+   CK G V +    F +M  ++V+PD++
Sbjct: 317 KHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLV 376

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
            +++++  + RSGN+ +A + F+ ++   L+P  V Y  LI G CR G + VA  L+  M
Sbjct: 377 CFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEM 436

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
           + QG   DV+TY  +++G CK   L  A + FNEM  + L PD +  T  I G  KLG+ 
Sbjct: 437 LQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNL 496

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
             A  L ++M  K    D++TYN L+ G  K+G ++ A E+   MV    +P  I+Y+ +
Sbjct: 497 QNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSIL 556

Query: 565 IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
           ++A    G L     +++ M+ K + PT++    +I  +   G       +  +M  +G 
Sbjct: 557 VNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGF 616

Query: 625 RPNVITYNALINGLCRLRRIDQAYGLFIDMEEE--GILPNKYTYTILINENCNAGNWQEA 682
            P+ I+YN LI G  R   + +A+GL   MEEE  G++P+ +TY  +++  C     +EA
Sbjct: 617 VPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEA 676

Query: 683 LRLYKEMLDREIEPDYCTHSALLLKQLDKD-----YKVH 716
             + ++M++R + PD  T++ ++   + +D     +++H
Sbjct: 677 EVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIH 715



 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 136/452 (30%), Positives = 238/452 (52%), Gaps = 37/452 (8%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           + L+  Y+ K ++E+   + N M   G  P V   N +I  L  +G   +A+EV+  M  
Sbjct: 274 NTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLR 333

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G+ P   TY ++L   CK+G++ E  ++  +M+ R   P+ V ++ +++ F+R+G L++
Sbjct: 334 SGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDK 393

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A      + + GL      Y  +I GY  KG++  A+NL  EM+ +G A  + TYN +++
Sbjct: 394 ALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILH 453

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           GLCK   + +A   F EM  + + PD  +   L+ G+C+ GN+  A  LF +++ + +  
Sbjct: 454 GLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRL 513

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
            VVTYNTL+DG  + GD++ A+++  +M+++ ILP  I+Y+I+VN  C  G+L+ A   +
Sbjct: 514 DVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVW 573

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV------ 530
           +EM+ K ++P      + I G  + G+ S+     E+M+++GF PD I+YN L+      
Sbjct: 574 DEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVRE 633

Query: 531 -------------------------------HGLCKLGSLEEANELLRKMVGDGFIPDHI 559
                                          HG C+   ++EA  +LRKM+  G  PD  
Sbjct: 634 ENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRS 693

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           TYT +I+  +   +L     + + ML++G SP
Sbjct: 694 TYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 107/346 (30%), Positives = 188/346 (54%), Gaps = 2/346 (0%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           ++ ++T+   +++ L+ FN +   GL+PD      +I+     G    A  +   M + G
Sbjct: 381 MMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQG 440

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
               +VTYNT+L   CK   + EA +L  EM  R   P+  T  +LI G  + G L+ A 
Sbjct: 441 CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAM 500

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L + M +  +++   +YN ++ G+ + G +  A  +  +MV++ + PT  +Y+IL+  L
Sbjct: 501 ELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNAL 560

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C  G +++A   + EM+ KN+ P ++  N+++ GYCRSGN  +     +++ S   VP  
Sbjct: 561 CSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDC 620

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQ--GILPDVITYTIMVNGSCKMGNLSMAREFF 476
           ++YNTLI G  R  ++  A  L + M  +  G++PDV TY  +++G C+   +  A    
Sbjct: 621 ISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVL 680

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            +M+ +G+ PDR  YT  I G +   + +EA+R+ +EML +GF PD
Sbjct: 681 RKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 172/315 (54%), Gaps = 2/315 (0%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           I  +L+  Y +K M+   + + N+ML+ G   DV   N I+  L       +A +++  M
Sbjct: 412 IYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM 471

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
            E  + P   T   ++D  CK G +Q A+EL  +M+ +    + VTYN L+ GF + G++
Sbjct: 472 TERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDI 531

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           + A+ +  DM+   +  +  SY+ ++     KG L EA  + +EM+++ + PT+   N +
Sbjct: 532 DTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSM 591

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN- 413
           I G C+ G  SD      +M+ +  +PD ISYNTL+YG+ R  N+ +AF L  ++     
Sbjct: 592 IKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQG 651

Query: 414 -LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
            LVP V TYN+++ G CR   ++ A+ +   MI +G+ PD  TYT M+NG     NL+ A
Sbjct: 652 GLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEA 711

Query: 473 REFFNEMLRKGLQPD 487
               +EML++G  PD
Sbjct: 712 FRIHDEMLQRGFSPD 726



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/129 (23%), Positives = 63/129 (48%)

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           + +LI  +    +L  A   F+ ++ KG   ++   NALI  L R+  ++ A+G++ ++ 
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKV 715
             G+  N YT  I++N  C  G  ++      ++ ++ + PD  T++ L+     K    
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287

Query: 716 HAVEYLESL 724
            A E + ++
Sbjct: 288 EAFELMNAM 296


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  308 bits (789), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 202/668 (30%), Positives = 325/668 (48%), Gaps = 54/668 (8%)

Query: 64  STVEEKPWAFCNNR-----WVSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQP 118
           S + +K  AF          +S HF      P+    VL   +   R  L F  W + Q 
Sbjct: 13  SLIADKAIAFLKRHPQRLASLSPHFT-----PQAASYVLLNSQSDQRTLLNFLTWAQAQ- 66

Query: 119 GVKRDEFVF-----CTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGL------ 167
             +   F F     C  L IL+   L R+A+ +       ++   L    G  L      
Sbjct: 67  -AQAHNFFFTPHCKCLALHILVRFKLYRTAHSLA-----ADLAATLPDPTGASLFRHLHD 120

Query: 168 ------SSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDN 221
                 S   S  + DL++   ++   V + L + +   R+G  P V + N ++  L   
Sbjct: 121 TFHLCSSPFSSSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRR 180

Query: 222 GFSVK-----AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSP 276
             S       A  V+R M   G+ P++ TYN ++     +G++++ L  + +M+  G SP
Sbjct: 181 SSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISP 240

Query: 277 NGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLE 336
           N VTYN LI    +  ++++A  L+R M   G+  +  SYN +I G   KG + E   L 
Sbjct: 241 NVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELV 300

Query: 337 EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS 396
           EEM  +G+ P   TYN L+ G CK G +        EM+ K + P++++Y TL+   C++
Sbjct: 301 EEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKA 360

Query: 397 GNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
           GN+  A  +FD++R R L P   TY TLIDG C+ G +  A ++   MI  G  P V+TY
Sbjct: 361 GNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTY 420

Query: 457 TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA 516
             +V+G C +G +  A      M+ +GL PD  +Y+T IAG  +  +  +A++++EEM+ 
Sbjct: 421 NALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVE 480

Query: 517 KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
           KG  PD +TY+ L+ GLC    L EA +L R+M+  G  PD +TYTS+I+A    G+L +
Sbjct: 481 KGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSK 540

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALI- 635
              L + M+++G  P  VTY+VLI+    + R ++A     ++  +   P+ +TYN LI 
Sbjct: 541 ALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIE 600

Query: 636 --------------NGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
                          G C    +++A  +F  M +    PN   Y ++I+ +   GN  +
Sbjct: 601 NCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHK 660

Query: 682 ALRLYKEM 689
           A  LY E+
Sbjct: 661 AYNLYMEL 668



 Score =  292 bits (747), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 164/478 (34%), Positives = 263/478 (55%), Gaps = 5/478 (1%)

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF-----SRNGELEQ 296
           S   ++ ++ S  + G + +AL LL      G +P  ++YN ++        S + + + 
Sbjct: 131 SSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDD 190

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  + RDM++ G+  + ++YN II G   +G L + L    +M   G++P + TYN LI 
Sbjct: 191 AERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLID 250

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
             CK  +V +A      M    V  ++ISYN+++ G C  G + E   L +E+R + LVP
Sbjct: 251 ASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVP 310

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
             VTYNTL++G C+ G+L     L   M+ +G+ P+V+TYT ++N  CK GNLS A E F
Sbjct: 311 DEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIF 370

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           ++M  +GL+P+   YTT I G  + G  +EAY++  EM+  GF P ++TYN LVHG C L
Sbjct: 371 DQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFL 430

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G ++EA  +LR MV  G  PD ++Y+++I       +L +   +   M+ KG+ P  VTY
Sbjct: 431 GRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTY 490

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
           + LI     + +L  AF  F EM  +G+ P+ +TY +LIN  C    + +A  L  +M +
Sbjct: 491 SSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQ 550

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYK 714
            G LP+  TY++LIN        + A RL  ++   E  PD  T++ L+    + ++K
Sbjct: 551 RGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFK 608



 Score =  288 bits (737), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 175/559 (31%), Positives = 279/559 (49%), Gaps = 50/559 (8%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           VF  M+RNG+ P+V   N II+ +   G   K     R M + GI P++VTYNT++D+ C
Sbjct: 194 VFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASC 253

Query: 255 KEGEMQEAL-----------------------------------ELLWEMQGRGCSPNGV 279
           K+ +++EA+                                   EL+ EM+G+G  P+ V
Sbjct: 254 KKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEV 313

Query: 280 TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
           TYN L+ GF + G L Q   L+ +M+  GL  +  +Y  +I    + G L  A+ + ++M
Sbjct: 314 TYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQM 373

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
             RG+ P   TY  LI G C+ G +++A     EM+     P +++YN L++GYC  G +
Sbjct: 374 RVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRV 433

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
            EA  +   +  R L P VV+Y+T+I G CR  +L  A Q+KE M+ +G+LPD +TY+ +
Sbjct: 434 QEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSL 493

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           + G C    L  A + F EM+R+GL PD   YT+ I      G+ S+A RL +EM+ +GF
Sbjct: 494 IQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGF 553

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH-------ASLE-- 570
            PD +TY+VL++GL K    + A  LL K+  +  +PD +TY ++I         S+E  
Sbjct: 554 LPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGL 613

Query: 571 ------MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
                  G +     +F  ML++   P    Y ++IH H+  G +  A+  + E++    
Sbjct: 614 VKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSF 673

Query: 625 RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
             + +   AL+  L R    D+   L  ++     L +     +L+  N   GN    L 
Sbjct: 674 ACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLN 733

Query: 685 LYKEMLDREIEPDYCTHSA 703
           +  EM    + PD   HS+
Sbjct: 734 VLTEMAKDGLLPDGGIHSS 752



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 213/431 (49%), Gaps = 50/431 (11%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K+  + Q L++ ++M+  GL P+V     +I  +   G   +A E++  M   G++P+
Sbjct: 322 FCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPN 381

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             TY T++D FC++G M EA ++L EM   G SP+ VTYN L+ G+   G +++A G++R
Sbjct: 382 ERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILR 441

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M++ GL     SY+ +I G+  +  L +A  ++EEMV +GV P   TY+ LI GLC   
Sbjct: 442 GMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQ 501

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           ++ +A   F EM+R+ + PD ++Y +L+  YC  G + +A  L DE+  R  +P  VTY+
Sbjct: 502 KLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYS 561

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM---------------VNGSCKMG 467
            LI+GL +    +VA++L   +  +  +PD +TY  +               V G C  G
Sbjct: 562 VLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKG 621

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
            ++ A   F  ML++  +P+   Y   I G  + G+  +AY L  E+    F    +   
Sbjct: 622 LMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVI 681

Query: 528 VLVHGLCKLGSLEEANELLR-----------------------------------KMVGD 552
            LV  L + G  +E + LL+                                   +M  D
Sbjct: 682 ALVKALAREGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKD 741

Query: 553 GFIPDHITYTS 563
           G +PD   ++S
Sbjct: 742 GLLPDGGIHSS 752



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 163/364 (44%), Gaps = 50/364 (13%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + +K ++ +   V ++M+ +G  P V   N ++      G   +A  + R M E G+ P 
Sbjct: 392 FCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPD 451

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +V+Y+T++  FC+E E+ +A ++  EM  +G  P+ VTY+ LI G     +L +A  L R
Sbjct: 452 VVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFR 511

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M++ GL     +Y  +I  Y   G L +AL L +EMV RG  P   TY++LI GL K  
Sbjct: 512 EMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKA 571

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLL-------------------------------- 390
           R   A+    ++  +  +PD ++YNTL+                                
Sbjct: 572 RTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFK 631

Query: 391 ------------------YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
                             +G+ R GN+ +A+ L+ EL   +     V    L+  L R G
Sbjct: 632 TMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREG 691

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
             +   +L +N++    L D     ++V  + K GN+        EM + GL PD   ++
Sbjct: 692 MNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLPDGGIHS 751

Query: 493 TQIA 496
           +  A
Sbjct: 752 SAPA 755



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 5/111 (4%)

Query: 623 GIRPNVITYNALINGLCRL-----RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
           G  P V++YNA+++ L R      R  D A  +F DM   G+ PN YTY ++I    + G
Sbjct: 162 GFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQG 221

Query: 678 NWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLGA 728
           + ++ L   ++M    I P+  T++ L+     K     A+  L ++ +G 
Sbjct: 222 DLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGG 272


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 162/471 (34%), Positives = 259/471 (54%), Gaps = 6/471 (1%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P +V +  +++  C+E  + EA  +L      GC P+ VTYNV I G  +   ++ A  L
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           ++ M +     +  +Y  ++ G  + G L EA+ + E+MV +G +PTL TY ++I GL K
Sbjct: 65  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR----NLVP 416
            GRV +AR  F +ML     PD   Y  L+ G C+SG   EA+ L+ E  +R      VP
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVP 184

Query: 417 TVVTYNTLIDGLCRYGD-LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
            VVTY +LIDGLC+ G  LE  Q   +  + +G +PD +TYT +++G CK+G +    E 
Sbjct: 185 DVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCER 244

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
           F+EM  +G +PD   Y   I G +K     +A+R+  +ML  G     +TYN+++ GLCK
Sbjct: 245 FHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCK 304

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
            G + EA      M   G +   +TY++++      G++    +LF  ML +G  P LV+
Sbjct: 305 AGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVS 364

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC-RLRRIDQAYGLFIDM 654
           Y ++I      G+L  A+ YF ++  + + P+V T+NA ++GLC RL  +     LF  M
Sbjct: 365 YNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESM 424

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             +G  PN ++Y+IL++  C AG  + AL +++EM+ R + PD    + L+
Sbjct: 425 VSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLI 475



 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 155/492 (31%), Positives = 249/492 (50%), Gaps = 12/492 (2%)

Query: 220 DNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGV 279
           D  FSV  R V       G +P  VTYN  +D  CK   + +A +LL +M  + C P  V
Sbjct: 24  DEAFSVLERAV-----RAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTV 78

Query: 280 TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
           TY  L+ G  + G L++A  ++  M++ G   +  +Y  +I G S+ G + EA  +  +M
Sbjct: 79  TYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDM 138

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM-LRKN---VIPDIISYNTLLYGYCR 395
           +  G  P    Y  LI GLCK G+  +A   + E   RK+    +PD+++Y +L+ G C+
Sbjct: 139 LGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCK 198

Query: 396 SGNIGEAFLLF-DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
           +G I EA  +F DE   R  +P  VTY ++IDGLC+ G +E   +    M N+G  PD +
Sbjct: 199 AGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAV 258

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
           TY  +++G  K   +  A   + +ML+ G       Y   + G  K G  +EAY     M
Sbjct: 259 TYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAM 318

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
             +G    ++TY+ L+ G C  G++  A EL R+M+  G  P+ ++Y  II      G L
Sbjct: 319 EERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKL 378

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAAR-GRLELAFMYFSEMQVKGIRPNVITYNA 633
            +    F  +L++ L P + T+   +H    R   +      F  M  +G  PN+ +Y+ 
Sbjct: 379 AKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSI 438

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
           L++G+CR   ++ A  +F +M   G+ P+   +  LI   C AG   EAL +++E L+R 
Sbjct: 439 LMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRE-LERR 497

Query: 694 IEPDYCTHSALL 705
             PD  ++ +LL
Sbjct: 498 SAPDAWSYWSLL 509



 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 147/490 (30%), Positives = 249/490 (50%), Gaps = 7/490 (1%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   V+    +  KM     LP       ++  L   G   +A  V   M E G  P++ 
Sbjct: 54  KAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLK 113

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY  ++D   K G ++EA  +  +M G GC P+   Y  LI G  ++G+ E+A  L ++ 
Sbjct: 114 TYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEA 173

Query: 305 LKLGLKVSA----HSYNPIICGYSEKGLLVEALNL-EEEMVTRGVAPTLATYNILIYGLC 359
                  +A     +Y  +I G  + G ++EA  + ++E V RG  P   TY  +I GLC
Sbjct: 174 NARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLC 233

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
           K GRV +   RF EM  +   PD ++Y  L+ G+ ++  I +A  ++ ++     V + V
Sbjct: 234 KLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTV 293

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
           TYN ++DGLC+ G +  A      M  +G +  V+TY+ +++G C  GN+S A E F  M
Sbjct: 294 TYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRM 353

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC-KLGS 538
           L +G +P+  +Y   I G  + G  ++AY   E++L +   PD+ T+N  +HGLC +L +
Sbjct: 354 LDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDT 413

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           + +  EL   MV  G  P+  +Y+ ++      G L    ++F  M+ +G++P +V +  
Sbjct: 414 VSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNT 473

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           LI      GR++ A   F E++ +   P+  +Y +L++GL R  R+++A  L   M+ +G
Sbjct: 474 LIRWLCIAGRVDEALEVFRELERRSA-PDAWSYWSLLDGLSRCERMEEARLLSFHMKLQG 532

Query: 659 ILPNKYTYTI 668
             P  Y  T+
Sbjct: 533 CAPRHYDLTV 542



 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 126/366 (34%), Positives = 202/366 (55%), Gaps = 5/366 (1%)

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
           +P +  + ++I GLC+  R+ +A       +R    PD ++YN  + G C++  + +AF 
Sbjct: 4   SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 63

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
           L  ++  +  +PT VTY  L+DGL + G L+ A  + E M+ +G  P + TYT++++G  
Sbjct: 64  LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLS 123

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP---- 520
           K G +  AR  F +ML  G +PD F YT  I G  K G   EAY L +E  A+       
Sbjct: 124 KAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAV 183

Query: 521 PDLITYNVLVHGLCKLGSLEEANELL-RKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
           PD++TY  L+ GLCK G + EA ++   + V  GFIPD +TYTSII    ++G +  G +
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCE 243

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
            F+ M  +G  P  VTY  LI        +  A   + +M   G   + +TYN +++GLC
Sbjct: 244 RFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLC 303

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
           +  R+ +AY  F+ MEE G +    TY+ L++  C+ GN   A+ L++ MLDR  EP+  
Sbjct: 304 KAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLV 363

Query: 700 THSALL 705
           +++ ++
Sbjct: 364 SYNIII 369



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 130/451 (28%), Positives = 225/451 (49%), Gaps = 15/451 (3%)

Query: 157 GILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK 216
            +L+ ++  G S   ++K   +++   +K   VE+   +F  ML NG  PD      +IK
Sbjct: 98  AVLEQMVEKGNSP--TLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIK 155

Query: 217 VLRDNGFSVKAREVYRMMGEFGIK-------PSIVTYNTMLDSFCKEGEMQEALELL-WE 268
            L  +G   K  E Y +  E   +       P +VTY +++D  CK G + EA ++   E
Sbjct: 156 GLCKSG---KPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDE 212

Query: 269 MQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
              RG  P+ VTY  +I G  + G +E+      +M   G +  A +Y  +I G+ +  +
Sbjct: 213 AVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKM 272

Query: 329 LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNT 388
           + +A  +  +M+  G   +  TYNI++ GLCK GRV++A   F  M  +  +  +++Y+ 
Sbjct: 273 IPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSA 332

Query: 389 LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
           L+ G+C  GN+  A  LF  +  R   P +V+YN +I GLCR G L  A    E ++ + 
Sbjct: 333 LMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRR 392

Query: 449 ILPDVITYTIMVNGSC-KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
           + PDV T+   ++G C ++  +S   E F  M+ +G  P+  +Y+  + G  + G    A
Sbjct: 393 LCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVA 452

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
             +  EM+++G  PD++ +N L+  LC  G ++EA E+ R++      PD  +Y S++  
Sbjct: 453 LEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRS-APDAWSYWSLLDG 511

Query: 568 SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
                 +   R L  +M  +G +P     TV
Sbjct: 512 LSRCERMEEARLLSFHMKLQGCAPRHYDLTV 542


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 177/564 (31%), Positives = 283/564 (50%), Gaps = 12/564 (2%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +L+  +   S +   L  F K+ + GL PDV   N ++  L       +A  ++  M E 
Sbjct: 119 ILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFET 178

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
             +P++VT+ T+++  C+EG + EA+ LL  M   G  P  +TY  ++ G  + G+   A
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSA 238

Query: 298 RGLIRDMLKLGLKV-SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
             L+R M ++   + +   Y+ II    + G   +A NL  EM  +G+ P L TYN +I 
Sbjct: 239 LNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIV 298

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           G C  GR SDA     EML + + PD+++YN L+  + + G   EA  L+DE+  R ++P
Sbjct: 299 GFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
             +TY+++IDG C+   L+ A+ +   M  +G  P++IT+  +++G C    +    E  
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELL 418

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           +EM   GL  D   Y T I G   +GD + A  L +EM++ G  PD++T + L+ GLC  
Sbjct: 419 HEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDN 478

Query: 537 GSLEEANELLRKMVG-----------DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           G L++A E+ + M             +G  PD  TY  +I   +  G      +L+  M 
Sbjct: 479 GKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMP 538

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
            +G+ P  +TY+ +I     + RL+ A   F  M  K   PNV+T+  LING C+  R+D
Sbjct: 539 HRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVD 598

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
               LF +M   GI+ N  TY  LI      GN   AL +++EM+   + PD  T   +L
Sbjct: 599 DGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 658

Query: 706 LKQLDKDYKVHAVEYLESLTLGAE 729
                K+    AV  LE L +  +
Sbjct: 659 TGLWSKEELKRAVAMLEKLQMSMD 682



 Score =  268 bits (686), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 164/564 (29%), Positives = 269/564 (47%), Gaps = 47/564 (8%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +E  + +F+ MLR+  LP V +  +++ V+           +Y+ M    I+  I ++  
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++  FC   ++  AL    ++   G  P+ VT+N L+ G      + +A  L   M +  
Sbjct: 120 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG----------- 357
            + +  ++  ++ G   +G +VEA+ L + M+  G+ PT  TY  ++ G           
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 358 -------------------------LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
                                    LCK GR SDA++ F EM  K + PD+ +YN+++ G
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
           +C SG   +A  L  E+  R + P VVTYN LI+   + G    A++L + M+ +GI+P+
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
            ITY+ M++G CK   L  A   F  M  KG  P+   + T I G        +   L  
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           EM   G   D  TYN L+HG   +G L  A +LL++M+  G  PD +T  +++    + G
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479

Query: 573 DLRRGRDLFNNMLRK-----------GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
            L+   ++F  M +            G+ P + TY +LI      G+   A   + EM  
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 539

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
           +GI P+ ITY+++I+GLC+  R+D+A  +F  M  +   PN  T+T LIN  C AG   +
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 599

Query: 682 ALRLYKEMLDREIEPDYCTHSALL 705
            L L+ EM  R I  +  T+  L+
Sbjct: 600 GLELFCEMGRRGIVANAITYITLI 623



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 146/478 (30%), Positives = 242/478 (50%), Gaps = 12/478 (2%)

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           +++A++L  +M      P+ V +  L+    R    +    L + M +  ++   +S+  
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           +I  +     L  AL+   ++   G+ P + T+N L++GLC   RVS+A + F +M    
Sbjct: 120 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
             P+++++ TL+ G CR G I EA  L D +    L PT +TY T++DG+C+ GD   A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 439 QLKENMIN-QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
            L   M     I+P+V+ Y+ +++  CK G  S A+  F EM  KG+ PD F Y + I G
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
               G  S+A +L +EML +   PD++TYN L++   K G   EA EL  +M+  G IP+
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
            ITY+S+I    +   L     +F  M  KG SP L+T+  LI  +    R++       
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
           EM   G+  +  TYN LI+G   +  ++ A  L  +M   G+ P+  T   L++  C+ G
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479

Query: 678 NWQEALRLYKEM------LDRE-----IEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
             ++AL ++K M      LD       +EPD  T++ L+   +++   + A E  E +
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 128/420 (30%), Positives = 199/420 (47%), Gaps = 36/420 (8%)

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           G+ E   L +A++L  +M+     P++  +  L+  + +  R       + +M RK +  
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           DI S+  L+  +C    +  A   F +L    L P VVT+NTL+ GLC    +  A  L 
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
             M      P+V+T+T ++NG C+ G +  A    + M+  GLQP +  Y T + G  K 
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 502 GDT------------------------------------SEAYRLQEEMLAKGFPPDLIT 525
           GDT                                    S+A  L  EM  KG  PDL T
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           YN ++ G C  G   +A +LL++M+     PD +TY ++I+A ++ G      +L++ ML
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
            +G+ P  +TY+ +I     + RL+ A   F  M  KG  PN+IT+N LI+G C  +RID
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
               L  +M E G++ +  TY  LI+     G+   AL L +EM+   + PD  T   LL
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 87/207 (42%), Gaps = 38/207 (18%)

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV------------------ 594
           GF  + +   S  H   E+  L    DLF++MLR    P++V                  
Sbjct: 42  GFGGESLKLQSGFH---EIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLV 98

Query: 595 -----------------TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
                            ++T+LI    +  +L  A   F ++   G+ P+V+T+N L++G
Sbjct: 99  ISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHG 158

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           LC   R+ +A  LF  M E    PN  T+T L+N  C  G   EA+ L   M++  ++P 
Sbjct: 159 LCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPT 218

Query: 698 YCTHSALLLKQLDKDYKVHAVEYLESL 724
             T+  ++     K   V A+  L  +
Sbjct: 219 QITYGTIVDGMCKKGDTVSALNLLRKM 245


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 175/537 (32%), Positives = 287/537 (53%), Gaps = 16/537 (2%)

Query: 203 GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           G +P V   N ++  L D   +  AR  +  M   G+ P++ TYN ++ + C  G  +EA
Sbjct: 111 GYVPSVLAYNAVLLALSDASLT-SARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
           L +L +M+G GC PN VTYN L+  F R GE++ A  L+  ML  GLK +  ++N ++ G
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
             + G + +A  + +EM+  G+AP   +YN L+ G CK G   +A   F EM +K ++PD
Sbjct: 230 MCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 289

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
           ++++ +L++  C++GN+  A  L  ++R R L    VT+  LIDG C+ G L+ A     
Sbjct: 290 VVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 349

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            M    I P V+ Y  ++NG C +G +  ARE  +EM  KGL+PD   Y+T I+   K  
Sbjct: 350 GMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 409

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
           DT  A+ L ++ML KG  PD ITY+ L+  LC+   L +A+ L + M+  G  PD  TYT
Sbjct: 410 DTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYT 469

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRL----ELAFMYFSE 618
           S+I    + G++ R   L + M++ G+ P +VTY+VLI+  +   R     +L F  + E
Sbjct: 470 SLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHE 529

Query: 619 MQVKG-----------IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
             +              +  + +  AL+ G C    +++A  ++  M +     +   Y+
Sbjct: 530 EPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYS 589

Query: 668 ILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           +LI+ +C AGN  +AL  +K+ML R   P+  +  +L+    +    V A + ++ L
Sbjct: 590 VLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQL 646



 Score =  265 bits (676), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 166/551 (30%), Positives = 267/551 (48%), Gaps = 50/551 (9%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
           F+ ML +G+ P+V   N +I+ L   G   +A  + R M   G  P++VTYNT++ +F +
Sbjct: 138 FDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFR 197

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
            GE+  A  L+  M   G  PN VT+N ++ G  + G++E AR +  +M++ GL     S
Sbjct: 198 AGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVS 257

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR-------VSDAR 368
           YN ++ GY + G   EAL++  EM  +G+ P + T+  LI+ +CK G        V   R
Sbjct: 258 YNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMR 317

Query: 369 HRFFEM---------------------------LRK-NVIPDIISYNTLLYGYCRSGNIG 400
            R  +M                           +R+  + P ++ YN L+ GYC  G + 
Sbjct: 318 ERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMD 377

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           EA  L  E+ ++ L P VVTY+T+I   C+  D   A +L + M+ +G+LPD ITY+ ++
Sbjct: 378 EARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLI 437

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
              C+   LS A   F  M++ GLQPD F YT+ I G  K G+   A  L ++M+  G  
Sbjct: 438 RVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVL 497

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM--------- 571
           PD++TY+VL++GL K     EA +LL K+  +  IP +  Y +++H   +          
Sbjct: 498 PDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALL 557

Query: 572 ------GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
                 G +     ++ +ML +  +     Y+VLIH H   G +  A  +  +M  +G  
Sbjct: 558 KGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFA 617

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           PN  +  +LI GL     + +A  +   +     L +      LI+ N N GN    L +
Sbjct: 618 PNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDV 677

Query: 686 YKEMLDREIEP 696
              M    + P
Sbjct: 678 LHGMAKDGLLP 688



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 138/479 (28%), Positives = 234/479 (48%), Gaps = 15/479 (3%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           ML  GL P++   N ++  +   G    AR+V+  M   G+ P  V+YNT++  +CK G 
Sbjct: 211 MLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGC 270

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
             EAL +  EM  +G  P+ VT+  LI    + G LE A  L+R M + GL+++  ++  
Sbjct: 271 SHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTA 330

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           +I G+ +KG L +AL     M    + P++  YN LI G C  GR+ +AR    EM  K 
Sbjct: 331 LIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKG 390

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
           + PD+++Y+T++  YC++ +   AF L  ++  + ++P  +TY++LI  LC    L  A 
Sbjct: 391 LKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAH 450

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
            L +NMI  G+ PD  TYT +++G CK GN+  A    ++M++ G+ PD   Y+  I G 
Sbjct: 451 VLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGL 510

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH---------------GLCKLGSLEEAN 543
            K     EA +L  ++  +   P    Y+ L+H               G C  G + EA+
Sbjct: 511 SKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEAD 570

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
           ++ + M+   +  D   Y+ +IH     G++ +       ML++G +P   +   LI   
Sbjct: 571 KVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGL 630

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
              G +  A     ++       +     ALI+       +D    +   M ++G+LP+
Sbjct: 631 FENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPS 689



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 99/410 (24%), Positives = 177/410 (43%), Gaps = 42/410 (10%)

Query: 116 TQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGI------LDVLIGG---- 165
           TQ G+  D   F +++ ++ ++G L    W V  V  +   G+         LI G    
Sbjct: 282 TQKGIMPDVVTFTSLIHVMCKAGNLE---WAVTLVRQMRERGLQMNEVTFTALIDGFCKK 338

Query: 166 -----------GLSSC---VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNC 211
                      G+  C    S+   + L+  Y     +++   + ++M   GL PDV   
Sbjct: 339 GFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTY 398

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
           + II     N  +  A E+ + M E G+ P  +TY++++   C+E  + +A  L   M  
Sbjct: 399 STIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIK 458

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
            G  P+  TY  LI G  + G +E+A  L   M+K G+     +Y+ +I G S+    +E
Sbjct: 459 LGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAME 518

Query: 332 ALNLEEEMVTRGVAPTLATYNILIY---------------GLCKWGRVSDARHRFFEMLR 376
           A  L  ++      P    Y+ L++               G C  G +++A   +  ML 
Sbjct: 519 AQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLD 578

Query: 377 KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
           +N   D   Y+ L++G+CR+GN+ +A     ++  R   P   +  +LI GL   G +  
Sbjct: 579 RNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVE 638

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
           A Q+ + ++N   L D      +++ +   GN+    +  + M + GL P
Sbjct: 639 ADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLP 688


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 173/537 (32%), Positives = 286/537 (53%), Gaps = 16/537 (2%)

Query: 203 GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           G  P V   N ++  L D      AR  +  M   G+ P++ TYN ++ + C  G  +EA
Sbjct: 118 GYAPSVLAYNAVLLALSDASLP-SARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
           L +L +M+G GC PN VTYN L+  F R GE+++A  L+  M + GLK +  ++N ++ G
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
             + G + +A  + +EMV  G+AP   +YN L+ G CK G   +A   F EM RK ++PD
Sbjct: 237 ICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPD 296

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
           ++++ +L++  C++GN+  A  L  E+R R L    +T+  LIDG C+ G L+ A     
Sbjct: 297 VVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVR 356

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            M    I P V+ Y  ++NG C +G +  ARE   EM  KG++PD   Y+T ++   K G
Sbjct: 357 EMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNG 416

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
           DT  A++L ++ML  G  PD ITY+ L+  LC+   L +A+ L + M+  G  PD +TYT
Sbjct: 417 DTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYT 476

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
           S+I    + G++ R   L + M++ G+ P +VTY+VLI+  +   R + A     ++  +
Sbjct: 477 SLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHE 536

Query: 623 GIRPNVITYN---------------ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
              P  I Y+               AL+ G C    +++A  ++  + +     +   Y+
Sbjct: 537 EPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYS 596

Query: 668 ILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           +LI+ +C  GN  +AL  +K+ML     P+  +  +L+    +K   V A + ++ L
Sbjct: 597 VLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQL 653



 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 165/544 (30%), Positives = 261/544 (47%), Gaps = 50/544 (9%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
           F+ ML +G+ P+V   N +++ L   G   +A  V R M   G  P+ VTYNT++ +FC+
Sbjct: 145 FDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCR 204

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
            GE+  A  L+  M+  G  PN VT+N ++ G  + G +E AR +  +M+K GL     S
Sbjct: 205 AGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVS 264

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY------------------- 356
           YN ++ GY + G   EAL++  EM  +G+ P + T+  LI+                   
Sbjct: 265 YNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMR 324

Query: 357 ----------------GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
                           G CK G + DA     EM +  + P ++ YN L+ GYC  G + 
Sbjct: 325 ERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMD 384

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           EA  L  E+ ++ + P VVTY+T++   C+ GD   A QL + M+  G+LPD ITY+ ++
Sbjct: 385 EARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLI 444

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
              C+   L  A   F  M+  GLQPD   YT+ I G  K G+   A  L +EM+  G  
Sbjct: 445 RVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVL 504

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII----HASLE------ 570
           PD++TY+VL++GL K    +EA  LL K+  +  +P +I Y +++    +A L+      
Sbjct: 505 PDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALL 564

Query: 571 -----MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
                 G +     ++ ++L +  +     Y+VLIH H   G +  A  +  +M   G  
Sbjct: 565 KGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFA 624

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           PN  +  +LI GL     + +A  +   +     L +      LI+ N   GN    L +
Sbjct: 625 PNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDV 684

Query: 686 YKEM 689
              M
Sbjct: 685 LHGM 688



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 146/499 (29%), Positives = 250/499 (50%), Gaps = 15/499 (3%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  + +   V++   + + M   GL P++   N ++  +   G    AR+V+  M + G
Sbjct: 198 LVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEG 257

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           + P  V+YNT++  +CK G   EAL +  EM  +G  P+ VT+  LI    + G LE+A 
Sbjct: 258 LAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAV 317

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
           GL+R+M + GL+++  ++  +I G+ +KG L +AL    EM    + P++  YN LI G 
Sbjct: 318 GLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGY 377

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C  GR+ +AR    EM  K V PD+++Y+T+L  YC++G+   AF L  ++    ++P  
Sbjct: 378 CMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDA 437

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           +TY++LI  LC    L  A  L +NMI+ G+ PD +TYT +++G CK GN+  A    +E
Sbjct: 438 ITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDE 497

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH------- 531
           M++ G+ PD   Y+  I G  K   T EA RL  ++  +   P  I Y+ L+        
Sbjct: 498 MVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAEL 557

Query: 532 --------GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
                   G C  G + EA+++ + ++   +  D   Y+ +IH     G++ +       
Sbjct: 558 KSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQ 617

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           ML+ G +P   +   LI     +G +  A     ++       +     ALI+   +   
Sbjct: 618 MLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGN 677

Query: 644 IDQAYGLFIDMEEEGILPN 662
           +D    +   M  +G+LP+
Sbjct: 678 VDAVLDVLHGMARDGLLPS 696



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 96/392 (24%), Positives = 167/392 (42%), Gaps = 47/392 (11%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVE---------TVVCVNMHGILDVLIGGGLSS 169
           G++ +E  F  +++   + G L  A   V          +VVC N       LI G    
Sbjct: 327 GLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYN------ALING---- 376

Query: 170 CVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE 229
                        Y     +++   +  +M   G+ PDV   + I+     NG +  A +
Sbjct: 377 -------------YCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQ 423

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           + + M E G+ P  +TY++++   C+E  + +A  L   M   G  P+ VTY  LI G  
Sbjct: 424 LNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHC 483

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL-----EEEMVTRGV 344
           + G +E+A  L  +M+K G+     +Y+ +I G S+     EA  L      EE V   +
Sbjct: 484 KEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANI 543

Query: 345 A----------PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
                        L +   L+ G C  G +++A   +  +L +N   D   Y+ L++G+C
Sbjct: 544 KYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHC 603

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
           R GN+ +A     ++      P   +  +LI GL   G +  A Q+ + ++N   L D  
Sbjct: 604 REGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAE 663

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
               +++ + K GN+    +  + M R GL P
Sbjct: 664 ASKALIDLNLKEGNVDAVLDVLHGMARDGLLP 695


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 165/507 (32%), Positives = 282/507 (55%), Gaps = 16/507 (3%)

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M   G+ P++ TYN ++ + C  G ++EA+ ++ +M+G GC+PN VTYN L+  F R GE
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 294 LEQARGLIRDMLKLG-LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
           L+ A  ++  M + G  K +  ++N ++ G  + G +  A  + +EMV  G+AP + +YN
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
            L+ G CK G + ++   F EM ++ ++PD++++ +L++  C++GN+ +A  L  ++R R
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
            L    VT+  LIDG C+ G L+ A    E M   GI P V+ Y  ++NG CK+G + +A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
           RE   EM  K ++PD   Y+T I+G  K+G+   A++L ++ML KG  PD ITY+ L+ G
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 300

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           LC+   L +A EL   M+  G  PD  TYT++I    + G++ +   L + M+RKG+ P 
Sbjct: 301 LCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPD 360

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN---------------ALING 637
           +VTY+VLI+  +   R + A     ++  +   P+ I Y+               AL+ G
Sbjct: 361 VVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKG 420

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
            C    + +A  ++  M +     +   Y+ILI+ +C  GN ++AL  +K+ML     P+
Sbjct: 421 FCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPN 480

Query: 698 YCTHSALLLKQLDKDYKVHAVEYLESL 724
             +  +L+    ++   V A   ++ L
Sbjct: 481 STSTISLVRGLFEEGMVVEADNAIQDL 507



 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 165/531 (31%), Positives = 266/531 (50%), Gaps = 51/531 (9%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           M+R+G+ P+V   N +++ L   G   +A  V   M   G  P+ VTYNT++ +FC+ GE
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 259 MQEALELLWEMQGRG-CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
           +  A  ++  M+  G   PN VT+N ++ G  + G +E AR +  +M++ GL     SYN
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY--------------------- 356
            ++ GY + G L E+L +  EM  RG+ P + T+  LI+                     
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 357 --------------GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
                         G CK G + DA     EM +  + P ++ YN L+ GYC+ G +  A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
             L  E+ ++ + P VVTY+T+I G C+ G+L+ A QL + M+ +G+LPD ITY+ ++ G
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 300

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            C+   L+ A E F  ML+ G+QPD F YTT I G  K G+  +A  L +EM+ KG  PD
Sbjct: 301 LCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPD 360

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM----------- 571
           ++TY+VL++GL K    +EA+ LL K+  +  +PD+I Y +++    +            
Sbjct: 361 VVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKG 420

Query: 572 ----GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
               G ++    ++ +ML +        Y++LIH H   G +  A  +  +M   G  PN
Sbjct: 421 FCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPN 480

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGN 678
             +  +L+ GL     + +A     D+     L +      LI+ N   GN
Sbjct: 481 STSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGN 531



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 134/429 (31%), Positives = 223/429 (51%), Gaps = 15/429 (3%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL  Y K   + + L VF++M + GL+PDV     +I      G   +A  +   M E G
Sbjct: 122 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 181

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           ++ + VT+  ++D FCK+G + +AL  + EM+  G  P+ V YN LI G+ + G ++ AR
Sbjct: 182 LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAR 241

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            LIR+M    +K    +Y+ II GY + G L  A  L ++M+ +GV P   TY+ LI GL
Sbjct: 242 ELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGL 301

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C+  R++DA   F  ML+  V PD  +Y TL+ G+C+ GN+ +A  L DE+  + ++P V
Sbjct: 302 CEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDV 361

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY---------------TIMVNGS 463
           VTY+ LI+GL +    + A +L   + ++  +PD I Y                 ++ G 
Sbjct: 362 VTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGF 421

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
           C  G +  A + +  ML +  + D   Y+  I G  + G+  +A    ++ML  GF P+ 
Sbjct: 422 CMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNS 481

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
            +   LV GL + G + EA+  ++ ++    + D     ++I  + + G++    D+   
Sbjct: 482 TSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCG 541

Query: 584 MLRKGLSPT 592
           M R GL P+
Sbjct: 542 MARDGLLPS 550



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 110/318 (34%), Positives = 176/318 (55%), Gaps = 2/318 (0%)

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           + P V TYN L+  LC  G LE A  +  +M   G  P+ +TY  +V   C+ G L  A 
Sbjct: 6   VAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAE 65

Query: 474 EFFNEMLRKG-LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
              + M  +G  +P+   + + + G  K G    A ++ +EM+ +G  PD+++YN L+ G
Sbjct: 66  RVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSG 125

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
            CK+G L E+  +  +M   G +PD +T+TS+IHA+ + G+L +   L   M  +GL   
Sbjct: 126 YCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMN 185

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
            VT+T LI     +G L+ A +   EM+  GI+P+V+ YNALING C+L R+D A  L  
Sbjct: 186 EVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIR 245

Query: 653 DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
           +ME + + P+  TY+ +I+  C  GN   A +L ++ML + + PD  T+S+L+    ++ 
Sbjct: 246 EMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEK 305

Query: 713 YKVHAVEYLES-LTLGAE 729
               A E  E+ L LG +
Sbjct: 306 RLNDACELFENMLQLGVQ 323



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 104/447 (23%), Positives = 185/447 (41%), Gaps = 87/447 (19%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVE---------TVVCVNMHGILDVLIGGGLSS 169
           G++ +E  F  +++   + G L  A   VE         +VVC N       LI G    
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYN------ALING---- 230

Query: 170 CVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE 229
                        Y K   ++    +  +M    + PDV   + II      G    A +
Sbjct: 231 -------------YCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQ 277

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           + + M + G+ P  +TY++++   C+E  + +A EL   M   G  P+  TY  LI G  
Sbjct: 278 LNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHC 337

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           + G +E+A  L  +M++                                   +GV P + 
Sbjct: 338 KEGNVEKALSLHDEMIR-----------------------------------KGVLPDVV 362

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           TY++LI GL K  R  +A    F++  ++ +PD I Y+ L+    ++           E 
Sbjct: 363 TYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKA-----------EF 411

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
           +S      VV    L+ G C  G ++ A ++ ++M+++    D   Y+I+++G C+ GN+
Sbjct: 412 KS------VV---ALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNV 462

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A  F  +MLR G  P+  +  + + G  + G   EA    +++L      D      L
Sbjct: 463 RKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKAL 522

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIP 556
           +    K G+++   ++L  M  DG +P
Sbjct: 523 IDLNRKEGNVDALIDVLCGMARDGLLP 549



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 101/245 (41%), Gaps = 74/245 (30%)

Query: 117 QPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKIL 176
           Q GV+ DEF + T                                LI G           
Sbjct: 319 QLGVQPDEFTYTT--------------------------------LIDG----------- 335

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR--EVYRMM 234
                 + K+  VE+ L + ++M+R G+LPDV   + +I     NG S  AR  E +R++
Sbjct: 336 ------HCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLI-----NGLSKSARTKEAHRLL 384

Query: 235 GEF---GIKPSIVTYN---------------TMLDSFCKEGEMQEALELLWEMQGRGCSP 276
            +       P  + Y+                +L  FC +G M+EA ++   M  R    
Sbjct: 385 FKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKL 444

Query: 277 NGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLE 336
           +G  Y++LI G  R G + +A    + ML+ G   ++ S   ++ G  E+G++VEA N  
Sbjct: 445 DGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAI 504

Query: 337 EEMVT 341
           ++++T
Sbjct: 505 QDLLT 509


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 198/664 (29%), Positives = 325/664 (48%), Gaps = 62/664 (9%)

Query: 104 PRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVV--CVNMHGILDV 161
           P+ AL FF W+  +PG K +   + ++L ILI + LL  A  +  +++  C ++  +L V
Sbjct: 81  PQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFV 140

Query: 162 L-------IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRI 214
           L         G      +++  + +L+  +K  ++++   V+ ++L N + P++   N +
Sbjct: 141 LEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAM 200

Query: 215 IKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGC 274
           +      G  V+A      + + G+ P   TY +++   C+   +  A E+   M  +GC
Sbjct: 201 VNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGC 260

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
             N V+Y  LI G    G + +A  L  DM +     +  +Y  +I   S  G  VEALN
Sbjct: 261 QRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALN 320

Query: 335 LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
           L  EM  +G  P + TY +LI GLCK  ++ +AR    EM  K +IP +++YN L+ GYC
Sbjct: 321 LFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYC 380

Query: 395 RSGNIGEAFLLFDELRS-----------------------------------RNLVPTVV 419
           + G I +AF + D + S                                   R L P+++
Sbjct: 381 KEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLI 440

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
           TYN+LI G C+  DLE A +L   M   G++PD  TY++ ++  CK G +  A   F+ +
Sbjct: 441 TYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSV 500

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
             KG++ +   YT  I G  K+G    AY L E ML     P+  TYNVL+ GLCK   +
Sbjct: 501 KAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKM 560

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           +EA+ L+ KM+  G  P  +TYT +I   L+ G       +FN+M+  G  P + TYT  
Sbjct: 561 KEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAF 620

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           +HA+ ++G LE      ++M  +GI P+++TY  LI+G  RL    +A+     M + G 
Sbjct: 621 LHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGC 680

Query: 660 LPNKYTYTILI----NEN--------------CNAGNWQEALRLYKEMLDREIEPDYCTH 701
            P+ Y  +ILI    +EN               N   ++ AL+L+++M++     D   +
Sbjct: 681 KPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIY 740

Query: 702 SALL 705
            AL+
Sbjct: 741 GALI 744



 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 164/527 (31%), Positives = 272/527 (51%), Gaps = 20/527 (3%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           + + L +F  M  +   P V+    +I  L  +G  V+A  ++  M E G +P++ TY  
Sbjct: 280 INEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTV 339

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++D  CKE +M EA ++L EM  +G  P+ VTYN LI G+ + G ++ A  ++  M    
Sbjct: 340 LIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNS 399

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
              +  +YN +ICG  +K  + +A+ L  +M+ R ++P+L TYN LI+G CK   +  A 
Sbjct: 400 CGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESA- 458

Query: 369 HRFFEMLRKN-VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
           +R   ++ +N ++PD  +Y+  +   C+ G + EA  LFD ++++ +    V Y  LIDG
Sbjct: 459 YRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDG 518

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
            C+ G ++VA  L E M+N   LP+  TY +++ G CK   +  A     +ML  G++P 
Sbjct: 519 YCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPT 578

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              YT  I   LK G    A ++   M++ G+ PD+ TY   +H     G LEE ++++ 
Sbjct: 579 VVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIA 638

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
           KM  +G +PD +TYT +I     +G   R  D    M+  G  P+L   ++LI   +   
Sbjct: 639 KMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHEN 698

Query: 608 RL------------------ELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
           R+                  E+A   F +M   G   +V  Y ALI G C+  R+++A G
Sbjct: 699 RMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQG 758

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
           L   M+E G+ P++  Y  L++  C  G + EA+RL   M++  + P
Sbjct: 759 LVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLP 805



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 172/642 (26%), Positives = 269/642 (41%), Gaps = 102/642 (15%)

Query: 117 QPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKIL 176
           Q G +R+E  +  ++  L E+G +  A  +   +   N               C +++  
Sbjct: 257 QKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDN--------------CCPTVRTY 302

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
            +L+   +      + L +FN+M   G  P+V     +I  L       +AR++   M E
Sbjct: 303 TVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSE 362

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G+ PS+VTYN ++D +CKEG + +A E+L  M+   C PN  TYN LI G  +  ++ +
Sbjct: 363 KGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHK 422

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  L+  ML+  L  S  +YN +I G  +   L  A  L   M   G+ P   TY++ I 
Sbjct: 423 AMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFID 482

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
            LCK GRV +A   F  +  K V  + + Y  L+ GYC+ G I  A+ L + + +   +P
Sbjct: 483 TLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLP 542

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
              TYN LI+GLC+   ++ A  L   M+  G+ P V+TYTI++    K G    A + F
Sbjct: 543 NSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVF 602

Query: 477 NEML-----------------------------------RKGLQPDRFAYTTQIAGELKL 501
           N M+                                    +G+ PD   YT  I G  +L
Sbjct: 603 NHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARL 662

Query: 502 GDTSEAY----------------------------------------------------- 508
           G T  A+                                                     
Sbjct: 663 GLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIAL 722

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
           +L E+M+  G   D+  Y  L+ G C+   LEEA  L+  M   G  P    Y S++   
Sbjct: 723 KLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCC 782

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
            ++G       L + M+  GL P L +Y +L+      G  E A   F  +   G   + 
Sbjct: 783 CKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDE 842

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
           + +  LI+GL +   +D+   L   MEE+G  PN  TY++LI
Sbjct: 843 VAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLI 884



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 141/511 (27%), Positives = 222/511 (43%), Gaps = 53/511 (10%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K+ M++    + + M  N   P+ +  N +I  L       KA  +   M E  + PS
Sbjct: 379 YCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPS 438

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           ++TYN+++   CK  +++ A  LL  M   G  P+  TY+V I    + G +E+A  L  
Sbjct: 439 LITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFD 498

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            +   G+K +   Y  +I GY + G +  A +L E M+     P   TYN+LI GLCK  
Sbjct: 499 SVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEK 558

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           ++ +A     +ML   V P +++Y  L+    + G    A  +F+ + S    P V TY 
Sbjct: 559 KMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYT 618

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
             +      G LE    +   M  +GILPD++TYT++++G  ++G    A +F   M+  
Sbjct: 619 AFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDT 678

Query: 483 GLQP---------------DRFAYTTQIAGELKLGDTSE---AYRLQEEMLAKGFPPDLI 524
           G +P               +R   T    G   + +T E   A +L E+M+  G   D+ 
Sbjct: 679 GCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVS 738

Query: 525 TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM 584
            Y  L+ G C+   LEEA  L+  M   G  P    Y S++    ++G       L + M
Sbjct: 739 IYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAM 798

Query: 585 LRKGLSPTLVTYTVLIHAHAARGRLELAFMYF---------------------------- 616
           +  GL P L +Y +L+      G  E A   F                            
Sbjct: 799 VENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLV 858

Query: 617 ---SE----MQVKGIRPNVITYNALINGLCR 640
              SE    M+ KG +PN +TY+ LI GL R
Sbjct: 859 DECSELIDIMEEKGCQPNPLTYSLLIEGLER 889



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 117/473 (24%), Positives = 200/473 (42%), Gaps = 53/473 (11%)

Query: 82  HFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLR 141
           H Q  V+D E   R+L+ + E                G+  D++ +   ++ L + G + 
Sbjct: 447 HGQCKVNDLESAYRLLSLMNEN---------------GLVPDQWTYSVFIDTLCKEGRVE 491

Query: 142 SAYWVVETVVCVNMHG---ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNK 198
            A  + ++V    +     I   LI G                 Y K   ++    +  +
Sbjct: 492 EAGTLFDSVKAKGVKANEVIYTALIDG-----------------YCKVGKIDVAYSLLER 534

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           ML +  LP+    N +I+ L       +A  +   M   G+KP++VTY  ++    K+G 
Sbjct: 535 MLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGA 594

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
              AL++   M   G  P+  TY   +  +   G LE+   +I  M + G+     +Y  
Sbjct: 595 FDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTV 654

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR-------- 370
           +I GY+  GL   A +  + MV  G  P+L   +ILI  L    R+ + R          
Sbjct: 655 LIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSN 714

Query: 371 ----------FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
                     F +M+      D+  Y  L+ G+C+   + EA  L   ++ R + P+   
Sbjct: 715 TLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDI 774

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YN+L+D  C+ G    A +L + M+  G+LP + +Y ++V G    G+   A+  F+ +L
Sbjct: 775 YNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLL 834

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
             G   D  A+   I G LK     E   L + M  KG  P+ +TY++L+ GL
Sbjct: 835 SCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGL 887



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 98/193 (50%), Gaps = 3/193 (1%)

Query: 529 LVHGLCKLGSLEEANELLRKMVGDG---FIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           ++   C +  +    E+ RKM  DG   F P    Y +I+ +  +   +   + ++  +L
Sbjct: 127 MIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELL 186

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
              +SP + T+  +++ +   G +  A +Y S++   G+ P+  TY +LI G CR + +D
Sbjct: 187 NNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVD 246

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            AY +F+ M ++G   N+ +YT LI+  C AG   EAL+L+ +M +    P   T++ L+
Sbjct: 247 NAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLI 306

Query: 706 LKQLDKDYKVHAV 718
                   KV A+
Sbjct: 307 YALSGSGRKVEAL 319



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 10/175 (5%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A +++  M E G    +  Y  ++  FC++  ++EA  L+  M+ RG SP+   YN L+ 
Sbjct: 721 ALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLD 780

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
              + G   +A  L+  M++ GL     SY  ++C     GL +E  N + + V  G+  
Sbjct: 781 CCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVC-----GLYIEGSNEKAKAVFHGLLS 835

Query: 347 TLATYN-----ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS 396
               Y+     +LI GL K   V +       M  K   P+ ++Y+ L+ G  R+
Sbjct: 836 CGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGLERT 890


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  306 bits (784), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 191/621 (30%), Positives = 314/621 (50%), Gaps = 27/621 (4%)

Query: 95   RVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVN 154
            +VL  +R     AL FF W  +Q G   D +    +L+ L+     + A  V    +C +
Sbjct: 816  KVLQGVRNGD-AALGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDALQVYRNKLCCS 874

Query: 155  ---------MHGI------------LDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCL 193
                     +HG+            L  +   G+   V +  + +  L   +K  ++  L
Sbjct: 875  PNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARK--LDSAL 932

Query: 194  LVFNKMLRNGLLP-DVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDS 252
             +F +M  +G  P DV   + I+  L  +G    A  +   M   G  P++VTY+++L  
Sbjct: 933  ELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHG 992

Query: 253  FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
             CK G++ EA  LL  M   GCSPN VTYN +I G  + G +++A  L+ +M+  G + +
Sbjct: 993  LCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPN 1052

Query: 313  AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
              +Y  ++  + + G   +A+ L E MV +G  P L TYN L+   CK   V  A     
Sbjct: 1053 VVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLS 1112

Query: 373  EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
             M++K  +P+++SYNT++ G C++  + E  LL +++ S N VP +VT+NT+ID +C+  
Sbjct: 1113 SMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTY 1172

Query: 433  DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK-GLQPDRFAY 491
             +++A +L   +   G  P+++TY  +V+G CK      A     EM RK G  PD   Y
Sbjct: 1173 RVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITY 1232

Query: 492  TTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
             T I G  K      AY+L  +ML+ G  PD +TY++++  LCK   ++EAN +L  M+ 
Sbjct: 1233 NTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLK 1292

Query: 552  DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLEL 611
            +GF P  ITY ++I    + G+L +  ++   +L KG  P +VT+++ I   + RGRL  
Sbjct: 1293 NGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQ 1352

Query: 612  AFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
            A      M   G+ P+ +TYN L+ G C     + A  LF  M + G  P+  TYT L+ 
Sbjct: 1353 AGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVG 1412

Query: 672  ENCNAGNWQEAL-RLYKEMLD 691
               +  ++++ L  + K M+D
Sbjct: 1413 HLVDKKSYKDLLAEVSKSMVD 1433



 Score =  302 bits (773), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 196/680 (28%), Positives = 313/680 (46%), Gaps = 88/680 (12%)

Query: 77  RWVSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIE 136
           R   D ++  +S PE++ +VL R+ + P  AL FF W ET+ G + +  +FC        
Sbjct: 81  RVALDEYRGQLS-PEIVGKVLQRLID-PGAALVFFEWAETRDGYQHE--IFCC------- 129

Query: 137 SGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVF 196
                                                   + LL +  K     Q   +F
Sbjct: 130 ----------------------------------------NCLLNVLVKAHQYSQAHDLF 149

Query: 197 NKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKE 256
              +      D    + +I      G  + A E++  M   G+K     + ++L   C  
Sbjct: 150 RSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDA 209

Query: 257 GEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSY 316
           G+  +A+    EM  + C P+ VTYN +I G S++  L+ A  L+ +M+  G   +  SY
Sbjct: 210 GQCSDAVLHFREMS-KTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSY 268

Query: 317 NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
           N ++ G+ +   +  AL L E+MVTRG  P + +Y  +I GLCK  +V +A     +M++
Sbjct: 269 NTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQ 328

Query: 377 KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
           +   P++I+Y TL+ G+CR G++  A  L  ++  R   P  +TYN ++   CR  D+E 
Sbjct: 329 RGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMER 388

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
           A Q+ + MI  G  PD I Y+ +++G CK G L  A +   +M+R+G +PD    +T I 
Sbjct: 389 AHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLID 448

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
              K      A  L    +     PD++ Y++L+H LCK   L EA   L  MV +   P
Sbjct: 449 ALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYP 508

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
           D +TY S++    +   +     LF+ M   G+ P +VTY+++IH+      L+ AF   
Sbjct: 509 DVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKML 568

Query: 617 SEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF------------------ID----- 653
             M+     P+V+TY+ALINGLC+   +D+A+ +F                  ID     
Sbjct: 569 ERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKI 628

Query: 654 ------------MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
                       M ++   P+  TYT LIN  CNA   +EA R+ +EM D+   PD  T+
Sbjct: 629 NKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTY 688

Query: 702 SALLLKQLDKDYKVHAVEYL 721
              LL+ L K   +  VE L
Sbjct: 689 GT-LLRALQKTNNLELVEQL 707



 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 144/439 (32%), Positives = 231/439 (52%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K + VE  L +  +M+  G  PDV +   +I  L       +A  V   M + G +P+
Sbjct: 275 FCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPN 334

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           ++TY T++D FC+ G++  A+EL+ +M  RG  PN +TYN ++  F R  ++E+A  +++
Sbjct: 335 VITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQ 394

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M++ G    A +Y+ II G+ + G L EA +L E+M+ RG  P +A  + LI  LCK  
Sbjct: 395 MMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAA 454

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            +  A+      +  +  PD+++Y+ L++  C++  + EA    D +      P VVTYN
Sbjct: 455 AIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYN 514

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           +++DGLC+   +  A  L + M   G++PDV+TY+I+++  CK  NL  A +    M   
Sbjct: 515 SVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEA 574

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
              PD   Y+  I G  K G   +A+ + +EML  G  P+L+TYN L+ GLCK+  +E+A
Sbjct: 575 KCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQA 634

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            E+L  M      PD ITYT +I+       L     +   M  KG  P  +TY  L+ A
Sbjct: 635 AEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRA 694

Query: 603 HAARGRLELAFMYFSEMQV 621
                 LEL      EM+ 
Sbjct: 695 LQKTNNLELVEQLLKEMEA 713



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 136/441 (30%), Positives = 229/441 (51%), Gaps = 4/441 (0%)

Query: 267  WEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEK 326
            W     G + +  T N L+    R    + A  + R+  KL    +  ++  +I G    
Sbjct: 833  WATSQEGYNHDTYTCNCLLQALLRLKRPKDALQVYRN--KLCCSPNMFTFTILIHGLCRA 890

Query: 327  GLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK-NVIPDIIS 385
            G +  A  L +EM   GV   +  +N++I GLC   ++  A   F EM    +  PD+ +
Sbjct: 891  GDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFT 950

Query: 386  YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
            Y+T++    +SG + +A  L +++ S+   P VVTY++L+ GLC+ G L+ A  L + M 
Sbjct: 951  YSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMT 1010

Query: 446  NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
              G  P+++TY  +++G CK+G +  A     EM+  G QP+   YT  +    K G   
Sbjct: 1011 RSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAE 1070

Query: 506  EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
            +A  L E M+ KG+ P+L TYN L+   CK   +E A +LL  M+  G +P+ ++Y ++I
Sbjct: 1071 DAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVI 1130

Query: 566  HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
                +   +  G  L   ML     P +VT+  +I A     R+++A+  F+ +Q  G  
Sbjct: 1131 AGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCT 1190

Query: 626  PNVITYNALINGLCRLRRIDQAYGLFIDM-EEEGILPNKYTYTILINENCNAGNWQEALR 684
            PN++TYN+L++GLC+ RR DQA  L  +M  ++G  P+  TY  +I+  C +     A +
Sbjct: 1191 PNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYK 1250

Query: 685  LYKEMLDREIEPDYCTHSALL 705
            L+ +ML   + PD  T+S ++
Sbjct: 1251 LFLQMLSDGLAPDDVTYSIVI 1271



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 188/686 (27%), Positives = 306/686 (44%), Gaps = 106/686 (15%)

Query: 107  ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
            AL  F+ +E       D F + TI++ L++SG +  A  +VE             ++  G
Sbjct: 931  ALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVED------------MVSKG 978

Query: 167  LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
             S   ++     LL    K   +++   +  +M R+G  P++   N II      G   +
Sbjct: 979  CSP--NVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDE 1036

Query: 227  AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
            A  +   M + G +P++VTY  +LD+FCK G+ ++A+ L+  M  +G  PN  TYN L+ 
Sbjct: 1037 AYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLD 1096

Query: 287  GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR---- 342
             F +  E+E+A  L+  M++ G   +  SYN +I G  +   + E + L E+M++     
Sbjct: 1097 MFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVP 1156

Query: 343  -------------------------------GVAPTLATYNILIYGLCKWGRVSDARHRF 371
                                           G  P L TYN L++GLCK  R   A +  
Sbjct: 1157 DIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLL 1216

Query: 372  FEMLRKN-VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT------------- 417
             EM RK    PDII+YNT++ G C+S  +  A+ LF ++ S  L P              
Sbjct: 1217 REMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCK 1276

Query: 418  ----------------------VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
                                   +TY TLIDG C+ G+L+ A ++ + ++++G  PDV+T
Sbjct: 1277 WRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVT 1336

Query: 456  YTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML 515
            ++I ++   K G L  A E    MLR GL PD   Y T + G      T +A  L E M 
Sbjct: 1337 FSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMR 1396

Query: 516  AKGFPPDLITYNVLVHGLCKLGSLEE-ANELLRKMVGDGFIPDHITYTSIIHASLEM-GD 573
              G  PD  TY  LV  L    S ++   E+ + MV  GF  +H   +S + AS+E+  D
Sbjct: 1397 QCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNH-ELSSKLEASIEVEAD 1455

Query: 574  LRRGRDLFNNMLRKGLSP-------------TLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
            +R G  +  +M  K  SP              +V ++ ++  +    + E AF  +  M 
Sbjct: 1456 VRLGCAIV-DMFGKCGSPQDARKVFEGMDQRNVVLWSAMLGVYVFHKQEEQAFGLWRVMG 1514

Query: 621  VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE-GILPNKYTYTILINENCNAGNW 679
            ++G+ P+ +T+ +L+   C    +D A   F+ +  + G+ P    ++ +I+     G  
Sbjct: 1515 LEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLV 1574

Query: 680  QEALRLYKEMLDREIEPDYCTHSALL 705
             EA  L   ML    +P   T + LL
Sbjct: 1575 NEAEDL---MLGMPCKPSAATWNCLL 1597



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 103/338 (30%), Positives = 168/338 (49%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           ++ ++ +++ +E+   V   M++ G  PD  N + II      G   +A ++   M   G
Sbjct: 376 IMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRG 435

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
            +P +   +T++D+ CK   +  A ELL    G  C+P+ V Y++LI    +   L +A 
Sbjct: 436 CRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAE 495

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
             +  M+K        +YN ++ G  +   + +A  L + M   GV P + TY+I+I+  
Sbjct: 496 SWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSF 555

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           CK   +  A      M     +PD+++Y+ L+ G C++G + +AF +F E+      P +
Sbjct: 556 CKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNL 615

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           VTYNTLIDGLC+   +E A ++ E M  Q   PD ITYT ++NG C    L  A     E
Sbjct: 616 VTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLRE 675

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA 516
           M  KG  PDR  Y T +    K  +     +L +EM A
Sbjct: 676 MKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEA 713



 Score = 39.7 bits (91), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 27/120 (22%), Positives = 55/120 (45%), Gaps = 4/120 (3%)

Query: 179  LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGF-SVKAREVYRMMGEF 237
            +L +Y      EQ   ++  M   G+ PD      ++ +    G       E   +  ++
Sbjct: 1493 MLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDY 1552

Query: 238  GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
            G++P +  ++ ++D   + G + EA +L   M G  C P+  T+N L++ +   G+ E+A
Sbjct: 1553 GLEPGVDHFSCVIDLLGRLGLVNEAEDL---MLGMPCKPSAATWNCLLSAYKICGDFERA 1609


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  306 bits (784), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 202/680 (29%), Positives = 334/680 (49%), Gaps = 34/680 (5%)

Query: 48  SVLNPESESYYKELIISTVEEKPWAFCNNRWVSDHFQAVVSD--PELLVRVLNRIREKPR 105
           S L+  +++   E  ++ ++  P+          H  ++ S   PEL   +L + +    
Sbjct: 13  STLSSPTDALLAEKALTLLKRYPY----------HLNSISSQITPELASYLLLQTQNDRT 62

Query: 106 IALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVV--CVNMHG--ILDV 161
           + L+F  +   +P    +    C  L IL +  L ++A  + + +    V+  G      
Sbjct: 63  LTLKFINF--AKPHQFFNPHCKCIALHILTKFKLYKTAQNLAQDLAENSVDEKGNYFFQC 120

Query: 162 LIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRII-KVLRD 220
           L         S  + DL++   +  + +E+ L + +    NG +P V + N I+  ++R 
Sbjct: 121 LKDTYFMCNSSSAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRC 180

Query: 221 NGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVT 280
               + A +VYR M   G+  ++ +YN ++  FC  G ++  L    EM+   C PN VT
Sbjct: 181 RKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVT 240

Query: 281 YNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV 340
           YN +I  + +   +++A  L+R M   GL+ +  +YN +I G    G + E   +  EM 
Sbjct: 241 YNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMD 300

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
            +G AP   TYN L+ G CK G    A     EMLR  + PD+++Y +L+   C++GN+ 
Sbjct: 301 RKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLN 360

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
            A   FD++  R L P  VTY +LI+G  + G ++ A ++ + MI  G  P ++TY  ++
Sbjct: 361 RAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALL 420

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
           NG C  G +  A      M  KGL PD  +Y+T IAG  +  +   A+++  EM+ KG  
Sbjct: 421 NGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVS 480

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           PD ITY+ L+ GLC+   L EA +L ++M+    +PD  TYTS+I+   + GDL    +L
Sbjct: 481 PDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNL 540

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN-------- 632
            + M++KG  P  VTY VLI+    + R   A     ++      PN ITY+        
Sbjct: 541 HDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSD 600

Query: 633 -------ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
                  ALI G C    +++A  +F  M +    PN+  Y ++I+ +C  GN  +A +L
Sbjct: 601 IEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKL 660

Query: 686 YKEMLDREIEPDYCTHSALL 705
           YKEM+D    P   T  AL+
Sbjct: 661 YKEMVDFGFIPHTVTIIALV 680



 Score =  292 bits (747), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 176/530 (33%), Positives = 275/530 (51%), Gaps = 34/530 (6%)

Query: 167 LSSCVSIKILDLLLLI--YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS 224
           ++S VS+ +    +LI  +     +E  L  F +M RN  LP+V   N +I         
Sbjct: 195 IASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRI 254

Query: 225 VKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVL 284
            +A ++ R MG  G++P+++TYN +++  C+ G ++E   +L EM  +G +P+GVTYN L
Sbjct: 255 DEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTL 314

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           + G+ + G   QA  L  +ML+ GL     +Y  +I    + G L  A+   ++M  RG+
Sbjct: 315 VNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGL 374

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
            P   TY  LI G  + G + +A   + EM+R    P I++YN LL G+C SG + EA  
Sbjct: 375 RPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIG 434

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
           L   +  + L P VV+Y+T+I G CRY +L+ A Q+   M+ +G+ PD ITY+ ++ G C
Sbjct: 435 LLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLC 494

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
           +   L+ A + F EML K L PD F YT+ I G  K GD +EA  L +EM+ KGF PD +
Sbjct: 495 EQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTV 554

Query: 525 TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM 584
           TYNVL++GL K     EA  LL K+  D  IP+ ITY ++I +  ++             
Sbjct: 555 TYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDI------------- 601

Query: 585 LRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRI 644
                     +   LI     +G +  A   F  M  +  +PN   YN +I+G CR   +
Sbjct: 602 -------EFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNV 654

Query: 645 DQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
            +A+ L+ +M + G +P+  T   L+              LY E +D ++
Sbjct: 655 HKAHKLYKEMVDFGFIPHTVTIIALVKA------------LYSEGMDEQL 692



 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 166/509 (32%), Positives = 267/509 (52%), Gaps = 3/509 (0%)

Query: 209 KNCNRIIKVLRDNGFSVKAREVYRMMGE--FGIKPSIVTYNTMLDSFCKEGEMQEALELL 266
           K    + + L +N    K    ++ + +  F    S   ++ ++ S      +++AL ++
Sbjct: 96  KTAQNLAQDLAENSVDEKGNYFFQCLKDTYFMCNSSSAVFDLVVKSCSYLNFIEKALNIV 155

Query: 267 WEMQGRGCSPNGVTYNVLITGFSR-NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
              +  G  P  ++YN ++    R    +  A  + R+M+  G+ ++  SYN +I G+  
Sbjct: 156 DLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCA 215

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
            G L   L   EEM      P + TYN +I   CK  R+ +A      M  + + P++++
Sbjct: 216 AGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLT 275

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           YN ++ G CR G I E   +  E+  +   P  VTYNTL++G C+ G+   A  L   M+
Sbjct: 276 YNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEML 335

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
             G+ PDV+TYT ++N  CK GNL+ A EFF++M  +GL+P+   YT+ I G  + G   
Sbjct: 336 RNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMD 395

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           EAYR+ +EM+  GFPP ++TYN L++G C  G +EEA  LLR M G G  PD ++Y++II
Sbjct: 396 EAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTII 455

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
                  +L R   +   M+ KG+SP  +TY+ LI     + RL  A   F EM  K + 
Sbjct: 456 AGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLL 515

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           P+  TY +LING C+   +++A  L  +M ++G LP+  TY +LIN        +EA RL
Sbjct: 516 PDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRL 575

Query: 686 YKEMLDREIEPDYCTHSALLLKQLDKDYK 714
             ++   E  P+  T+  L+    D ++K
Sbjct: 576 LLKLFYDESIPNGITYDTLIESCSDIEFK 604



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 152/495 (30%), Positives = 237/495 (47%), Gaps = 15/495 (3%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K   +++   +   M   GL P++   N +I  L   G   +   V   M   G  P 
Sbjct: 248 YCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPD 307

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            VTYNT+++ +CK G   +AL L  EM   G  P+ VTY  LI    + G L +A     
Sbjct: 308 GVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFD 367

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M   GL+ +  +Y  +I G+S+KG + EA  + +EM+  G  PT+ TYN L+ G C  G
Sbjct: 368 QMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSG 427

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R+ +A      M  K + PD++SY+T++ G+CR   +  AF +  E+  + + P  +TY+
Sbjct: 428 RMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYS 487

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           +LI GLC    L  A  L + M+N+ +LPD  TYT ++NG CK G+L+ A    +EM++K
Sbjct: 488 SLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKK 547

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH----------- 531
           G  PD   Y   I G  K   T EA RL  ++      P+ ITY+ L+            
Sbjct: 548 GFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVV 607

Query: 532 ----GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
               G C  G + EA+++   M+     P+   Y  IIH     G++ +   L+  M+  
Sbjct: 608 ALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDF 667

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
           G  P  VT   L+ A  + G  E   +   ++       +     AL+    +   ID  
Sbjct: 668 GFIPHTVTIIALVKALYSEGMDEQLNLVIRDILRSCKLSDAELSKALVQINHKEGNIDAV 727

Query: 648 YGLFIDMEEEGILPN 662
           + L  +M ++G LP+
Sbjct: 728 FNLLTEMAKDGFLPS 742



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 115/213 (53%), Gaps = 3/213 (1%)

Query: 515 LAK--GFPPDLITYNVLVHGLCKL-GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
           LAK  GF P +++YN ++  + +    +  A ++ R+M+  G   +  +Y  +I      
Sbjct: 157 LAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAA 216

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
           G+L  G   F  M R    P +VTY  +I A+    R++ AF     M ++G+ PN++TY
Sbjct: 217 GNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTY 276

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           N +INGLCR+ RI++  G+  +M+ +G  P+  TY  L+N  C  GN+ +AL L+ EML 
Sbjct: 277 NMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLR 336

Query: 692 REIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
             + PD  T+++L+           A+E+ + +
Sbjct: 337 NGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQM 369



 Score = 40.8 bits (94), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 4/146 (2%)

Query: 167 LSSCVSIKILDLLLLI--YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS 224
           + SC  I+   ++ LI  +  K ++ +   VF  M++    P+    N II     +G  
Sbjct: 595 IESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNV 654

Query: 225 VKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCS-PNGVTYNV 283
            KA ++Y+ M +FG  P  VT   ++ +   EG M E L L+     R C   +      
Sbjct: 655 HKAHKLYKEMVDFGFIPHTVTIIALVKALYSEG-MDEQLNLVIRDILRSCKLSDAELSKA 713

Query: 284 LITGFSRNGELEQARGLIRDMLKLGL 309
           L+    + G ++    L+ +M K G 
Sbjct: 714 LVQINHKEGNIDAVFNLLTEMAKDGF 739


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  306 bits (784), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 177/564 (31%), Positives = 283/564 (50%), Gaps = 12/564 (2%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +L+  +   S +   L  F K+ + GL PDV   N ++  L       +A  ++  M E 
Sbjct: 119 ILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFET 178

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
             +P++VT+ T+++  C+EG + EA+ LL  M   G  P  +TY  ++ G  + G+   A
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSA 238

Query: 298 RGLIRDMLKLGLKV-SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
             L+R M ++   + +   Y+ II    + G   +A NL  EM  +G+ P L TYN +I 
Sbjct: 239 LNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIV 298

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           G C  GR SDA     EML + + PD+++YN L+  + + G   EA  L+DE+  R ++P
Sbjct: 299 GFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
             +TY+++IDG C+   L+ A+ +   M  +G  P++IT+  +++G C    +    E  
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELL 418

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           +EM   GL  D   Y T I G   +GD + A  L +EM++ G  PD++T + L+ GLC  
Sbjct: 419 HEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDN 478

Query: 537 GSLEEANELLRKMVG-----------DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           G L++A E+ + M             +G  PD  TY  +I   +  G      +L+  M 
Sbjct: 479 GKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMP 538

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
            +G+ P  +TY+ +I     + RL+ A   F  M  K   PNV+T+  LING C+  R+D
Sbjct: 539 HRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVD 598

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
               LF +M   GI+ N  TY  LI      GN   AL +++EM+   + PD  T   +L
Sbjct: 599 DGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 658

Query: 706 LKQLDKDYKVHAVEYLESLTLGAE 729
                K+    AV  LE L +  +
Sbjct: 659 TGLWSKEELKRAVAMLEKLQMSMD 682



 Score =  268 bits (685), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 164/564 (29%), Positives = 269/564 (47%), Gaps = 47/564 (8%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +E  + +F+ MLR+  LP V +  +++ V+           +Y+ M    I+  I ++  
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++  FC   ++  AL    ++   G  P+ VT+N L+ G      + +A  L   M +  
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG----------- 357
            + +  ++  ++ G   +G +VEA+ L + M+  G+ PT  TY  ++ G           
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 358 -------------------------LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
                                    LCK GR SDA++ F EM  K + PD+ +YN+++ G
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
           +C SG   +A  L  E+  R + P VVTYN LI+   + G    A++L + M+ +GI+P+
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
            ITY+ M++G CK   L  A   F  M  KG  P+   + T I G        +   L  
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           EM   G   D  TYN L+HG   +G L  A +LL++M+  G  PD +T  +++    + G
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479

Query: 573 DLRRGRDLFNNMLRK-----------GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
            L+   ++F  M +            G+ P + TY +LI      G+   A   + EM  
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 539

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
           +GI P+ ITY+++I+GLC+  R+D+A  +F  M  +   PN  T+T LIN  C AG   +
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 599

Query: 682 ALRLYKEMLDREIEPDYCTHSALL 705
            L L+ EM  R I  +  T+  L+
Sbjct: 600 GLELFCEMGRRGIVANAITYITLI 623



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 146/478 (30%), Positives = 242/478 (50%), Gaps = 12/478 (2%)

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           +++A++L  +M      P+ V +  L+    R    +    L + M +  ++   +S+  
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           +I  +     L  AL+   ++   G+ P + T+N L++GLC   RVS+A + F +M    
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
             P+++++ TL+ G CR G I EA  L D +    L PT +TY T++DG+C+ GD   A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 439 QLKENMIN-QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
            L   M     I+P+V+ Y+ +++  CK G  S A+  F EM  KG+ PD F Y + I G
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
               G  S+A +L +EML +   PD++TYN L++   K G   EA EL  +M+  G IP+
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
            ITY+S+I    +   L     +F  M  KG SP L+T+  LI  +    R++       
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
           EM   G+  +  TYN LI+G   +  ++ A  L  +M   G+ P+  T   L++  C+ G
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479

Query: 678 NWQEALRLYKEM------LDRE-----IEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
             ++AL ++K M      LD       +EPD  T++ L+   +++   + A E  E +
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/420 (30%), Positives = 199/420 (47%), Gaps = 36/420 (8%)

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           G+ E   L +A++L  +M+     P++  +  L+  + +  R       + +M RK +  
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           DI S+  L+  +C    +  A   F ++    L P VVT+NTL+ GLC    +  A  L 
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
             M      P+V+T+T ++NG C+ G +  A    + M+  GLQP +  Y T + G  K 
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 502 GDT------------------------------------SEAYRLQEEMLAKGFPPDLIT 525
           GDT                                    S+A  L  EM  KG  PDL T
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           YN ++ G C  G   +A +LL++M+     PD +TY ++I+A ++ G      +L++ ML
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
            +G+ P  +TY+ +I     + RL+ A   F  M  KG  PN+IT+N LI+G C  +RID
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
               L  +M E G++ +  TY  LI+     G+   AL L +EM+   + PD  T   LL
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 87/207 (42%), Gaps = 38/207 (18%)

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV------------------ 594
           GF  + +   S  H   E+  L    DLF++MLR    P++V                  
Sbjct: 42  GFGGESLKLQSGFH---EIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLV 98

Query: 595 -----------------TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
                            ++T+LI    +  +L  A   F ++   G+ P+V+T+N L++G
Sbjct: 99  ISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHG 158

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           LC   R+ +A  LF  M E    PN  T+T L+N  C  G   EA+ L   M++  ++P 
Sbjct: 159 LCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPT 218

Query: 698 YCTHSALLLKQLDKDYKVHAVEYLESL 724
             T+  ++     K   V A+  L  +
Sbjct: 219 QITYGTIVDGMCKKGDTVSALNLLRKM 245


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  306 bits (784), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 184/602 (30%), Positives = 301/602 (50%), Gaps = 9/602 (1%)

Query: 104 PRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVV--CVNMHGILDV 161
           P+ AL FF W+  +PG K +   + ++L ILI + LL  A  +  +++  C ++  +L V
Sbjct: 81  PQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFV 140

Query: 162 L-------IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRI 214
           L         G      +++  + +L+  +K  ++++   V+ ++L N + P++   N +
Sbjct: 141 LEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAM 200

Query: 215 IKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGC 274
           +      G  V+A      + + G+ P   TY +++   C+   +  A E+   M  +GC
Sbjct: 201 VNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGC 260

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
             N V+Y  LI G    G + +A  L  DM +     +  +Y  +I   S  G  VEALN
Sbjct: 261 QRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALN 320

Query: 335 LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
           L  EM  +G  P + TY +LI GLCK  ++ +AR    EM  K +IP +++YN L+ GYC
Sbjct: 321 LFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYC 380

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
           + G I +AF + D + S +  P   TYN LI GLC+   +  A  L   M+ + + P +I
Sbjct: 381 KEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLI 440

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
           TY  +++G CK+ +L  A    + M   GL PD++ Y+  I    K G   EA  L + +
Sbjct: 441 TYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSV 500

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
            AKG   + + Y  L+ G CK+G ++ A  LL +M+ D  +P+  TY  +I    +   +
Sbjct: 501 KAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKM 560

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
           +    L   ML  G+ PT+VTYT+LI      G  + A   F+ M   G +P+V TY A 
Sbjct: 561 KEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAF 620

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           ++       +++   +   M EEGILP+  TYT+LI+     G    A    K M+D   
Sbjct: 621 LHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGC 680

Query: 695 EP 696
           +P
Sbjct: 681 KP 682



 Score =  286 bits (731), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 164/538 (30%), Positives = 272/538 (50%), Gaps = 31/538 (5%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           + + L +F  M  +   P V+    +I  L  +G  V+A  ++  M E G +P++ TY  
Sbjct: 280 INEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTV 339

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++D  CKE +M EA ++L EM  +G  P+ VTYN LI G+ + G ++ A  ++  M    
Sbjct: 340 LIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNS 399

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
              +  +YN +ICG  +K  + +A+ L  +M+ R ++P+L TYN LI+G CK   +  A 
Sbjct: 400 CGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESA- 458

Query: 369 HRFFEMLRKN-VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
           +R   ++ +N ++PD  +Y+  +   C+ G + EA  LFD ++++ +    V Y  LIDG
Sbjct: 459 YRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDG 518

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
            C+ G ++VA  L E M+N   LP+  TY +++ G CK   +  A     +ML  G++P 
Sbjct: 519 YCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPT 578

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              YT  I   LK G    A ++   M++ G+ PD+ TY   +H     G LEE ++++ 
Sbjct: 579 VVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIA 638

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
           KM  +G +PD +TYT +I     +G   R  D    M+  G  P+L   ++LI   +   
Sbjct: 639 KMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHEN 698

Query: 608 RL-----------------------------ELAFMYFSEMQVKGIRPNVITYNALINGL 638
           R+                             E+A   F +M   G   +V  Y ALI G 
Sbjct: 699 RMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGF 758

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
           C+  R+++A GL   M+E G+ P++  Y  L++  C  G + EA+RL   M++  + P
Sbjct: 759 CQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLP 816



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 164/556 (29%), Positives = 266/556 (47%), Gaps = 29/556 (5%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+L + +   V+    VF  M + G   +  +   +I  L + G   +A +++  M E  
Sbjct: 235 LILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDN 294

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
             P++ TY  ++ +    G   EAL L  EM+ +GC PN  TY VLI G  +  ++++AR
Sbjct: 295 CCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEAR 354

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            ++ +M + GL  S  +YN +I GY ++G++ +A  + + M +    P   TYN LI GL
Sbjct: 355 KMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGL 414

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           CK  +V  A     +ML + + P +I+YN+L++G C+  ++  A+ L   +    LVP  
Sbjct: 415 CKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQ 474

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
            TY+  ID LC+ G +E A  L +++  +G+  + + YT +++G CK+G + +A      
Sbjct: 475 WTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLER 534

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           ML     P+ + Y   I G  K     EA  L  +ML  G  P ++TY +L+  + K G+
Sbjct: 535 MLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGA 594

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
            + A ++   MV  G+ PD  TYT+ +HA    G L    D+   M  +G+ P LVTYTV
Sbjct: 595 FDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTV 654

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ------------ 646
           LI  +A  G    AF +   M   G +P++   + LI  L    R+ +            
Sbjct: 655 LIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSN 714

Query: 647 -----------------AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
                            A  LF  M E G   +   Y  LI   C     +EA  L   M
Sbjct: 715 VNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHM 774

Query: 690 LDREIEPDYCTHSALL 705
            +R + P    +++LL
Sbjct: 775 KERGMSPSEDIYNSLL 790



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 170/583 (29%), Positives = 270/583 (46%), Gaps = 43/583 (7%)

Query: 117 QPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKIL 176
           Q G +R+E  +  ++  L E+G +  A  +   +   N               C +++  
Sbjct: 257 QKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDN--------------CCPTVRTY 302

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
            +L+   +      + L +FN+M   G  P+V     +I  L       +AR++   M E
Sbjct: 303 TVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSE 362

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G+ PS+VTYN ++D +CKEG + +A E+L  M+   C PN  TYN LI G  +  ++ +
Sbjct: 363 KGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHK 422

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  L+  ML+  L  S  +YN +I G  +   L  A  L   M   G+ P   TY++ I 
Sbjct: 423 AMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFID 482

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
            LCK GRV +A   F  +  K V  + + Y  L+ GYC+ G I  A+ L + + +   +P
Sbjct: 483 TLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLP 542

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
              TYN LI+GLC+   ++ A  L   M+  G+ P V+TYTI++    K G    A + F
Sbjct: 543 NSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVF 602

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           N M+  G QPD   YT  +      G   E   +  +M  +G  PDL+TY VL+ G  +L
Sbjct: 603 NHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARL 662

Query: 537 GSLEEANELLRKMVGDGFIPD----HITYTSIIHA-------------------SLEMGD 573
           G    A + L+ MV  G  P      I   ++ H                    S+++ D
Sbjct: 663 GLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIAD 722

Query: 574 LRRGRD------LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
           + +  +      LF  M+  G +  +  Y  LI     + RLE A      M+ +G+ P+
Sbjct: 723 VWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPS 782

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
              YN+L++  C+L    +A  L   M E G+LP   +Y +L+
Sbjct: 783 EDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLV 825



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 135/504 (26%), Positives = 221/504 (43%), Gaps = 29/504 (5%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K+ M++    + + M  N   P+ +  N +I  L       KA  +   M E  + PS
Sbjct: 379 YCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPS 438

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           ++TYN+++   CK  +++ A  LL  M   G  P+  TY+V I    + G +E+A  L  
Sbjct: 439 LITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFD 498

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            +   G+K +   Y  +I GY + G +  A +L E M+     P   TYN+LI GLCK  
Sbjct: 499 SVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEK 558

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           ++ +A     +ML   V P +++Y  L+    + G    A  +F+ + S    P V TY 
Sbjct: 559 KMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYT 618

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
             +      G LE    +   M  +GILPD++TYT++++G  ++G    A +F   M+  
Sbjct: 619 AFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDT 678

Query: 483 GLQPDRF-----------------------------AYTTQIAGELKLGDTSEAYRLQEE 513
           G +P  +                               +  IA   K  +   A +L E+
Sbjct: 679 GCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEK 738

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           M+  G   D+  Y  L+ G C+   LEEA  L+  M   G  P    Y S++    ++G 
Sbjct: 739 MVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGV 798

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
                 L + M+  GL P L +Y +L+      G  E A   F  +   G   + + +  
Sbjct: 799 YAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKV 858

Query: 634 LINGLCRLRRIDQAYGLFIDMEEE 657
           LI+GL +   +D+   L   MEE+
Sbjct: 859 LIDGLLKRDLVDECSELIDIMEEK 882



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 119/471 (25%), Positives = 203/471 (43%), Gaps = 39/471 (8%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           M  NGL+PD    +  I  L   G   +A  ++  +   G+K + V Y  ++D +CK G+
Sbjct: 465 MNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGK 524

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           +  A  LL  M    C PN  TYNVLI G  +  ++++A  L+  ML +G+K +  +Y  
Sbjct: 525 IDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTI 584

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           +I    + G    AL +   MV+ G  P + TY   ++     G + +      +M  + 
Sbjct: 585 LIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEG 644

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL---- 434
           ++PD+++Y  L+ GY R G    AF     +      P++   + LI  L     +    
Sbjct: 645 ILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETR 704

Query: 435 -------------------------EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
                                    E+A +L E M+  G   DV  Y  ++ G C+   L
Sbjct: 705 SEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERL 764

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A+   + M  +G+ P    Y + +    KLG  +EA RL + M+  G  P L +Y +L
Sbjct: 765 EEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLL 824

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           V GL   GS E+A  +   ++  G+  D + +  +I   L+   +    +L + M  K  
Sbjct: 825 VCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKDA 884

Query: 590 SP----TLVTYTVLIHAHAARGRLE------LAFMYFSEMQVKGIRPNVIT 630
           +            L  A++ +G LE      L+  +    Q+ G+  N+I+
Sbjct: 885 TAQADIACAALMRLAAANSTKGALEDHELRGLSVNHGELTQLSGLVNNLIS 935



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 93/178 (52%), Gaps = 3/178 (1%)

Query: 544 ELLRKMVGDG---FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           E+ RKM  DG   F P    Y +I+ +  +   +   + ++  +L   +SP + T+  ++
Sbjct: 142 EVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMV 201

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
           + +   G +  A +Y S++   G+ P+  TY +LI G CR + +D AY +F+ M ++G  
Sbjct: 202 NGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQ 261

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAV 718
            N+ +YT LI+  C AG   EAL+L+ +M +    P   T++ L+        KV A+
Sbjct: 262 RNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEAL 319



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 113/260 (43%), Gaps = 29/260 (11%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y  + M+E+   V  KM   G+LPD+     +I      G + +A +  + M + G KPS
Sbjct: 624 YFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPS 683

Query: 243 IVTYNTMLDSFCKEGEMQE-----------------------------ALELLWEMQGRG 273
           +   + ++ +   E  M+E                             AL+L  +M   G
Sbjct: 684 LYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHG 743

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
           C+ +   Y  LI GF +   LE+A+GL+  M + G+  S   YN ++    + G+  EA+
Sbjct: 744 CTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAV 803

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
            L + MV  G+ P L +Y +L+ GL   G    A+  F  +L      D +++  L+ G 
Sbjct: 804 RLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGL 863

Query: 394 CRSGNIGEAFLLFDELRSRN 413
            +   + E   L D +  ++
Sbjct: 864 LKRDLVDECSELIDIMEEKD 883


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  306 bits (784), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 188/549 (34%), Positives = 297/549 (54%), Gaps = 19/549 (3%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F +M   G++PDV +   +I     +G   KA+ ++  M + GI+P + T   ++D FC
Sbjct: 187 LFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFC 246

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           KEG++ EA ELL  M  RGC  + VTY+ LI G      + +A  L   M KLG +  A 
Sbjct: 247 KEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAI 306

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVT-------RGVAPTLATYNILIYGLCKWGRVSDA 367
           +Y  ++ G  + G +  AL+L +EM+        + + P + T ++LI  LCK G+V +A
Sbjct: 307 AYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEA 366

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
                 M+++  I DI++Y+TL+ G C    I EA  LF  ++     P  +TY TL+ G
Sbjct: 367 NELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKG 426

Query: 428 LCRYGDLEVAQQLKENMINQ----GI--LPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           LC+ G++ +A QL + M+N     GI   P +I+Y+I+++G CK      ARE F EM  
Sbjct: 427 LCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKA 486

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
           +G+ PD  +YTT I G    G   +A  L  EML  G  PD+ T +VL+  LCK G + E
Sbjct: 487 QGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIE 546

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           AN+LL  ++  G I D +T T+++        + +   LF  M + G  P +VT   L+ 
Sbjct: 547 ANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMK 606

Query: 602 AHAARGRLELAFM----YFSEMQVKGI--RPNVITYNALINGLCRLRRIDQAYGLFIDME 655
                G +++A        S+    GI  +PN I+Y+ +I+GLC+  R D+A  LF +M+
Sbjct: 607 GLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMK 666

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKV 715
             G++P+  +YT LI+  C +G W++A  L+ EM+D  ++PD  T S L+     +   +
Sbjct: 667 ALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVI 726

Query: 716 HAVEYLESL 724
            A E LE +
Sbjct: 727 EANELLEVM 735



 Score =  301 bits (771), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 187/545 (34%), Positives = 287/545 (52%), Gaps = 25/545 (4%)

Query: 186 KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM----GEFGIK- 240
           K  + +   +F  M + G  PD      ++K L   G    A  +++ M     ++GIK 
Sbjct: 283 KHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKC 342

Query: 241 --PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
             P + T + ++D  CKEG++ EA ELL  M  RGC  + VTY+ LI G      + +A 
Sbjct: 343 IRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEAT 402

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR------GVAPTLATYN 352
            L   M KLG +  A +Y  ++ G  + G +  AL L +EM+           PTL +Y+
Sbjct: 403 WLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYS 462

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
           I+I GLCK  R  +AR  F EM  + ++PD+ISY TL++G+C SG   +A  LF+E+   
Sbjct: 463 IIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDV 522

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
            + P V T + LID LC+ G +  A +L E +I +G + DV+T T +V G C    +S A
Sbjct: 523 GIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKA 582

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP------PDLITY 526
            + F +M + G  P+     T + G  + G+   A  L + ML+   P      P+ I+Y
Sbjct: 583 TQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISY 642

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           ++++ GLCK G  +EA EL ++M   G IPD I+YTS+IH     G  +  + LFN M+ 
Sbjct: 643 SIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVD 702

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
            G+ P + T++VLI      G++  A      M  +G  PN +TY  L+ GLC   RI +
Sbjct: 703 IGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISE 762

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD------REIEPDYCT 700
           A  LF+ M++ G LP+  TY  L+   C  GN + AL L+K+ML          +PD  +
Sbjct: 763 ATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVIS 822

Query: 701 HSALL 705
           +S ++
Sbjct: 823 YSIII 827



 Score =  299 bits (765), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 179/505 (35%), Positives = 275/505 (54%), Gaps = 19/505 (3%)

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
           + I+P + T + ++D  CKEG++ EA ELL  M  RGC  + VTY+ LI G      + +
Sbjct: 48  YSIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISE 107

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR------GVAPTLAT 350
           A  L   M KLG +  A +Y  ++ G  + G +  AL L +EM+           PTL +
Sbjct: 108 ATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLIS 167

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           Y+I+I GLCK  R  +AR  F EM  + ++PD+ISY +L++G+C SG   +A  LF+E+ 
Sbjct: 168 YSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEML 227

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
              + P V T   LID  C+ G +  A +L E M+++G + D++TY+ ++ G C    +S
Sbjct: 228 DVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRIS 287

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML-------AKGFPPDL 523
            A + F  M + G +PD  AY T + G  + G  + A  L +EML        K   PD+
Sbjct: 288 EATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDV 347

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
            T ++L+  LCK G + EANELL  M+  G I D +TY+++I        +     LF +
Sbjct: 348 TTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMS 407

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK----GI--RPNVITYNALING 637
           M + G  P  +TY  L+      G + +A     EM       GI  +P +I+Y+ +I+G
Sbjct: 408 MQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDG 467

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           LC+ RR D+A  LF +M+ +GI+P+  +YT LI+  C +G W++A  L+ EMLD  I+PD
Sbjct: 468 LCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPD 527

Query: 698 YCTHSALLLKQLDKDYKVHAVEYLE 722
             T S L+     K   + A + LE
Sbjct: 528 VTTSSVLIDMLCKKGKVIEANKLLE 552



 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 165/507 (32%), Positives = 277/507 (54%), Gaps = 18/507 (3%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM----GEFGIK--PSIVTYNT 248
           +F  M + G  PD      ++K L   G    A ++++ M    G +GIK  P++++Y+ 
Sbjct: 404 LFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSI 463

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++D  CK+    EA EL  EM+ +G  P+ ++Y  LI GF  +G+ E+A+ L  +ML +G
Sbjct: 464 IIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVG 523

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           ++    + + +I    +KG ++EA  L E ++ RG    + T   L+ GLC   R+S A 
Sbjct: 524 IQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKAT 583

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR------NLVPTVVTYN 422
             F +M +   +P++++  TL+ G C+SGNI  A  L   + S       N  P  ++Y+
Sbjct: 584 QLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYS 643

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            +IDGLC+ G  + A++L + M   G++PDVI+YT +++G C+ G    A+  FNEM+  
Sbjct: 644 IIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDI 703

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G+QPD   ++  I    K G   EA  L E M+ +G  P+ +TY  LV GLC    + EA
Sbjct: 704 GVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEA 763

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK------GLSPTLVTY 596
            +L  KM   G +PD +TY +++    + G+++   +L   ML           P +++Y
Sbjct: 764 TQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISY 823

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
           +++I      GR + A   F EM+  G+ PNVI+Y +LI+G CR  +++ A  LF +M +
Sbjct: 824 SIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVD 883

Query: 657 EGILPNKYTYTILINENCNAGNWQEAL 683
           +G+  N  TY+++I+  C  G   +AL
Sbjct: 884 QGVQLNAVTYSVMIHGFCKEGQIDKAL 910



 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 172/546 (31%), Positives = 294/546 (53%), Gaps = 18/546 (3%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +L+ I  K+  V +   +   M++ G + D+   + +IK L       +A  ++  M + 
Sbjct: 352 MLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKL 411

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEM------QGRGCSPNGVTYNVLITGFSRN 291
           G +P  +TY T++   C+ G +  AL+L  EM       G  C P  ++Y+++I G  ++
Sbjct: 412 GCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKD 471

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
              ++AR L  +M   G+     SY  +I G+   G   +A  L  EM+  G+ P + T 
Sbjct: 472 RREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTS 531

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           ++LI  LCK G+V +A      ++++  I D+++  TL+ G C    I +A  LF +++ 
Sbjct: 532 SVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQK 591

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ----GI--LPDVITYTIMVNGSCK 465
              +P VVT  TL+ GLC+ G++++A +L +NM++     GI   P+ I+Y+I+++G CK
Sbjct: 592 LGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCK 651

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
            G    ARE F EM   G+ PD  +YT+ I G  + G   +A  L  EM+  G  PD+ T
Sbjct: 652 CGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTT 711

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           ++VL+  LCK G + EANELL  M+  G IP+ +TYT+++        +     LF  M 
Sbjct: 712 FSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQ 771

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK------GIRPNVITYNALINGLC 639
           + G  P +VTY  L+      G ++ A     +M           +P+VI+Y+ +I+GLC
Sbjct: 772 KLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLC 831

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
           +  R D+A  LF +M+  G++PN  +YT LI+  C +G  ++A  L+ EM+D+ ++ +  
Sbjct: 832 KHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAV 891

Query: 700 THSALL 705
           T+S ++
Sbjct: 892 TYSVMI 897



 Score =  281 bits (719), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 171/535 (31%), Positives = 278/535 (51%), Gaps = 19/535 (3%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           E+   +FN+ML  G+ PDV     +I +    G  ++A E+  +M   G    IVTY+T+
Sbjct: 217 EKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTL 276

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           +   C +  + EA +L   M+  GC P+ + Y  L+ G  + G++  A  L ++ML    
Sbjct: 277 IKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTS 336

Query: 310 KVSAHSYNPIICGYS-------EKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +       P +   S       ++G ++EA  L E M+ RG    + TY+ LI GLC   
Sbjct: 337 QYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEH 396

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN------LVP 416
           R+S+A   F  M +    PD I+Y TL+ G C++GNI  A  L  E+ +          P
Sbjct: 397 RISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKP 456

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
           T+++Y+ +IDGLC+    + A++L E M  QGI+PDVI+YT +++G C  G    A+  F
Sbjct: 457 TLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLF 516

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           NEML  G+QPD    +  I    K G   EA +L E ++ +G   D++T   LV GLC  
Sbjct: 517 NEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMK 576

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK------GLS 590
             + +A +L  KM   G +P+ +T  +++    + G+++   +L  NML           
Sbjct: 577 HRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCK 636

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           P  ++Y+++I      GR + A   F EM+  G+ P+VI+Y +LI+G CR  +   A  L
Sbjct: 637 PNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYL 696

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           F +M + G+ P+  T+++LI+  C  G   EA  L + M+ R   P+  T++ L+
Sbjct: 697 FNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLV 751



 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 173/567 (30%), Positives = 279/567 (49%), Gaps = 54/567 (9%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +L+ I  K+  V +   +   M++ G + D+   + +IK L       +A  ++  M + 
Sbjct: 59  MLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKL 118

Query: 238 GIKPSIVTYNTML-----------------------------------------DSFCKE 256
           G +P  +TY T++                                         D  CK+
Sbjct: 119 GCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKD 178

Query: 257 GEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSY 316
               EA EL  EM+ +G  P+ ++Y  LI GF  +G+ E+A+ L  +ML +G++    + 
Sbjct: 179 RREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTS 238

Query: 317 NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
             +I  + ++G ++EA  L E MV RG    + TY+ LI GLC   R+S+A   F  M +
Sbjct: 239 GVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKK 298

Query: 377 KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS-------RNLVPTVVTYNTLIDGLC 429
               PD I+Y TL+ G C++G I  A  L  E+ +       + + P V T + LID LC
Sbjct: 299 LGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILC 358

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
           + G +  A +L E MI +G + D++TY+ ++ G C    +S A   F  M + G +PD  
Sbjct: 359 KEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAI 418

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAK------GFPPDLITYNVLVHGLCKLGSLEEAN 543
            Y T + G  + G+ + A +L +EML           P LI+Y++++ GLCK    +EA 
Sbjct: 419 TYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEAR 478

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
           EL  +M   G +PD I+YT++IH     G   + + LFN ML  G+ P + T +VLI   
Sbjct: 479 ELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDML 538

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
             +G++  A      +  +G   +V+T   L+ GLC   RI +A  LF+ M++ G +PN 
Sbjct: 539 CKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNV 598

Query: 664 YTYTILINENCNAGNWQEALRLYKEML 690
            T   L+   C +GN + AL L+K ML
Sbjct: 599 VTCATLMKGLCQSGNIKIALELHKNML 625



 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 152/438 (34%), Positives = 242/438 (55%), Gaps = 14/438 (3%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F +M   G++PDV +   +I     +G   KA+ ++  M + GI+P + T + ++D  C
Sbjct: 480 LFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLC 539

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K+G++ EA +LL  +  RGC  + VT   L+ G      + +A  L   M KLG   +  
Sbjct: 540 KKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVV 599

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTR------GVAPTLATYNILIYGLCKWGRVSDAR 368
           +   ++ G  + G +  AL L + M++          P   +Y+I+I GLCK GR  +AR
Sbjct: 600 TCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEAR 659

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F EM    VIPD+ISY +L++G+CRSG   +A  LF+E+    + P V T++ LID L
Sbjct: 660 ELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDML 719

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G +  A +L E MI +G +P+ +TYT +V G C    +S A + F +M + G  PD 
Sbjct: 720 CKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDV 779

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAK------GFPPDLITYNVLVHGLCKLGSLEEA 542
             Y T + G  + G+   A  L ++ML+        F PD+I+Y++++ GLCK G  +EA
Sbjct: 780 VTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEA 839

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            EL ++M   G IP+ I+YTS+IH     G L   + LFN M+ +G+    VTY+V+IH 
Sbjct: 840 RELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHG 899

Query: 603 HAARGRLELAFMYFSEMQ 620
               G+++ A   F +M+
Sbjct: 900 FCKEGQIDKAL--FQKME 915



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 134/402 (33%), Positives = 199/402 (49%), Gaps = 48/402 (11%)

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
           ++VT  + P + T ++LI  LCK G+V +A      M+++  I DI++Y+TL+ G C   
Sbjct: 44  DIVTYSIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEH 103

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ----GI--LP 451
            I EA  LF  ++     P  +TY TL+ GLC+ G++ +A QL + M+N     GI   P
Sbjct: 104 RISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKP 163

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
            +I+Y+I+++G CK      ARE F EM  +G+ PD  +YT+ I G    G   +A  L 
Sbjct: 164 TLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLF 223

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
            EML  G  PD+ T  VL+   CK G + EANELL  MV  G I D +TY+++I      
Sbjct: 224 NEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMK 283

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM-------QVKGI 624
             +     LF +M + G  P  + Y  L+      G++ +A     EM        +K I
Sbjct: 284 HRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCI 343

Query: 625 RPNV-----------------------------------ITYNALINGLCRLRRIDQAYG 649
           RP+V                                   +TY+ LI GLC   RI +A  
Sbjct: 344 RPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATW 403

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           LF+ M++ G  P+  TY  L+   C  GN   AL+L++EML+
Sbjct: 404 LFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLN 445



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 65/174 (37%), Gaps = 61/174 (35%)

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
           G  PD  T+  +I+    +  +  G      ++R+G  P +VTY+               
Sbjct: 5   GLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYS--------------- 49

Query: 613 FMYFSEMQVKGIRPNVI-----------------------------------TYNALING 637
                      IRP+V                                    TY+ LI G
Sbjct: 50  -----------IRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKG 98

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           LC   RI +A  LF+ M++ G  P+  TY  L+   C  GN   AL+L++EML+
Sbjct: 99  LCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLN 152


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  305 bits (782), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 174/543 (32%), Positives = 279/543 (51%), Gaps = 39/543 (7%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V+  M+   ++PDV     +IK     G  +K + V   M E   KP++ TYN  +   C
Sbjct: 229 VYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLC 287

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           + G + EALE+   M  +G  P+G TY +L+ GF +    ++A+ +   M   GL  +  
Sbjct: 288 QTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRF 347

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +Y  +I G+ ++G + EAL +++EM+TRG+   + TYN +I G+ K G ++ A   F EM
Sbjct: 348 TYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEM 407

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           L   + PD  +YN L+ GY +S ++ +A  L  E+++R L P+  TY+ LI GLC   DL
Sbjct: 408 LMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDL 467

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A ++ + MI  G+ P+V  Y  ++    +     MA E    M+  G+ PD F Y   
Sbjct: 468 QKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCL 527

Query: 495 IAG--------ELKL---------------------------GDTSEAYRLQEEMLAKGF 519
           I G        E K+                           G+   A R  ++ML+ G 
Sbjct: 528 IIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGI 587

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
            P+ + Y +L+ G C +G+  EA    + M+  G IPD   Y++IIH+  + G  +    
Sbjct: 588 VPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMG 647

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
           +F   L+ G+ P +  Y  LI      G +E A   + EM   GI PN++ YN LINGLC
Sbjct: 648 VFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLC 707

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD-- 697
           +L  + +A  LF ++EE+ ++P+  TY+ +I+  C +GN  EA +L+ EM+ + I PD  
Sbjct: 708 KLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGY 767

Query: 698 -YC 699
            YC
Sbjct: 768 IYC 770



 Score =  305 bits (780), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 174/524 (33%), Positives = 288/524 (54%), Gaps = 1/524 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K+  +E+ L + ++M+  GL  +V   N +I  +   G   KA  ++  M   G++P 
Sbjct: 356 FIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPD 415

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             TYN ++D + K  +M +A ELL EM+ R  +P+  TY+VLI+G   + +L++A  ++ 
Sbjct: 416 TWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLD 475

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M++ G+K +   Y  +I  Y ++     A+ L + M+  GV P L  YN LI GLC+  
Sbjct: 476 QMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAK 535

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           +V +A+    +M  K + P+  +Y   +  Y +SG I  A   F ++ S  +VP  V Y 
Sbjct: 536 KVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYT 595

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            LI G C  G+   A    + M+ +G++PD+  Y+ +++   K G    A   F + L+ 
Sbjct: 596 ILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKT 655

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G+ PD F Y + I+G  K GD  +A +L +EML  G  P+++ YN L++GLCKLG + +A
Sbjct: 656 GVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKA 715

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            EL  ++     +PD +TY++II    + G+L     LF+ M+ KG+SP    Y +LI  
Sbjct: 716 RELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDG 775

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
               G LE A   F E Q K +  ++  +N+LI+  C+  ++ +A  LF DM ++ + PN
Sbjct: 776 CGKEGNLEKALSLFHEAQQKSV-GSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPN 834

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
             TYTILI+    A   +EA +L+ +M  R I P+  T+++LLL
Sbjct: 835 IVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLL 878



 Score =  297 bits (761), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 167/506 (33%), Positives = 266/506 (52%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V++ L V   M+  GL PD      ++        S +A+ ++  M   G+ P+  TY  
Sbjct: 292 VDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTA 351

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++D F KEG ++EAL +  EM  RG   N VTYN +I G ++ GE+ +A  L  +ML  G
Sbjct: 352 LIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAG 411

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           L+    +YN +I GY +   + +A  L  EM  R + P+  TY++LI GLC    +  A 
Sbjct: 412 LEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKAN 471

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               +M+R  V P++  Y TL+  Y +      A  L   + +  ++P +  YN LI GL
Sbjct: 472 EVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGL 531

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           CR   +E A+ L  +M  +GI P+  TY   +N   K G + +A  +F +ML  G+ P+ 
Sbjct: 532 CRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNN 591

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             YT  I G   +G+T EA    + ML KG  PD+  Y+ ++H L K G  +EA  +  K
Sbjct: 592 VIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLK 651

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
            +  G +PD   Y S+I    + GD+ +   L++ ML  G++P +V Y  LI+     G 
Sbjct: 652 FLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGE 711

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           +  A   F E++ K + P+V+TY+ +I+G C+   + +A+ LF +M  +GI P+ Y Y I
Sbjct: 712 VTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCI 771

Query: 669 LINENCNAGNWQEALRLYKEMLDREI 694
           LI+     GN ++AL L+ E   + +
Sbjct: 772 LIDGCGKEGNLEKALSLFHEAQQKSV 797



 Score =  296 bits (757), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 172/497 (34%), Positives = 276/497 (55%), Gaps = 10/497 (2%)

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           KA EV   M   G+KP++  Y T++ ++ +E   + A+ELL  M   G  P+   YN LI
Sbjct: 469 KANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLI 528

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            G  R  ++E+A+ L+ DM + G+K +AH+Y   I  YS+ G +  A    ++M++ G+ 
Sbjct: 529 IGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIV 588

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P    Y ILI G C  G   +A   F  ML K +IPDI +Y+ +++   ++G   EA  +
Sbjct: 589 PNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGV 648

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
           F +     +VP V  YN+LI G C+ GD+E A QL + M++ GI P+++ Y  ++NG CK
Sbjct: 649 FLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCK 708

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
           +G ++ ARE F+E+  K L PD   Y+T I G  K G+ +EA++L +EM++KG  PD   
Sbjct: 709 LGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYI 768

Query: 526 YNVLVHGLCKLGSLEEA----NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           Y +L+ G  K G+LE+A    +E  +K VG         + S+I +  + G +   R+LF
Sbjct: 769 YCILIDGCGKEGNLEKALSLFHEAQQKSVG-----SLSAFNSLIDSFCKHGKVIEARELF 823

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
           ++M+ K L+P +VTYT+LI A+     +E A   F +M+ + I PN +TY +L+    ++
Sbjct: 824 DDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQI 883

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
               +   LF DME  GI  +   Y ++ +  C  G   EAL+L  + L   I+ +    
Sbjct: 884 GNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVF 943

Query: 702 SALLLKQLDKDYKVHAV 718
            AL+   L K+ ++  V
Sbjct: 944 DALIF-HLCKEKQISTV 959



 Score =  271 bits (694), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 161/512 (31%), Positives = 267/512 (52%), Gaps = 1/512 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V ++M+RNG+ P+V     +IK          A E+ ++M   G+ P +  YN ++   C
Sbjct: 473 VLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLC 532

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           +  +++EA  LL +M  +G  PN  TY   I  +S++GE++ A    +DML  G+  +  
Sbjct: 533 RAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNV 592

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
            Y  +I G+ + G  VEAL+  + M+ +G+ P +  Y+ +I+ L K G+  +A   F + 
Sbjct: 593 IYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKF 652

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           L+  V+PD+  YN+L+ G+C+ G+I +A  L+DE+    + P +V YNTLI+GLC+ G++
Sbjct: 653 LKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEV 712

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
             A++L + +  + ++PDV+TY+ +++G CK GNL+ A + F+EM+ KG+ PD + Y   
Sbjct: 713 TKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCIL 772

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I G  K G+  +A  L  E   K     L  +N L+   CK G + EA EL   MV    
Sbjct: 773 IDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKL 831

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            P+ +TYT +I A  +   +     LF +M  + + P  +TYT L+ ++   G       
Sbjct: 832 TPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMIS 891

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F +M+ +GI  + I Y  + +  C+  +  +A  L      EGI      +  LI   C
Sbjct: 892 LFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLC 951

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
                   L L  EM   E+     T + LLL
Sbjct: 952 KEKQISTVLELLSEMGKEELSLSSKTCNTLLL 983



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 164/564 (29%), Positives = 268/564 (47%), Gaps = 75/564 (13%)

Query: 158 ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDV--KNCNRII 215
           +LD +I  G+    ++ +   L+  Y ++S  E  + +   M+ NG+LPD+   NC  II
Sbjct: 473 VLDQMIRNGVKP--NVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNC-LII 529

Query: 216 KVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCS 275
            + R      +A+ +   MGE GIKP+  TY   ++ + K GE+Q A     +M   G  
Sbjct: 530 GLCRAKKVE-EAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIV 588

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           PN V Y +LI G    G   +A    + ML+ GL     +Y+ II   S+ G   EA+ +
Sbjct: 589 PNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGV 648

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
             + +  GV P +  YN LI G CK G +  A   + EML   + P+I+ YNTL+ G C+
Sbjct: 649 FLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCK 708

Query: 396 SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
            G + +A  LFDE+  ++LVP VVTY+T+IDG C+ G+L  A +L + MI++GI PD   
Sbjct: 709 LGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYI 768

Query: 456 YTIMVNGS----------------------------------CKMGNLSMAREFFNEMLR 481
           Y I+++G                                   CK G +  ARE F++M+ 
Sbjct: 769 YCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVD 828

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
           K L P                                   +++TY +L+    K   +EE
Sbjct: 829 KKLTP-----------------------------------NIVTYTILIDAYGKAEMMEE 853

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A +L   M     IP+ +TYTS++ +  ++G+  +   LF +M  +G++   + Y V+  
Sbjct: 854 AEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMAS 913

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
           A+   G+   A    ++  V+GI+     ++ALI  LC+ ++I     L  +M +E +  
Sbjct: 914 AYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSL 973

Query: 662 NKYTYTILINENCNAGNWQEALRL 685
           +  T   L+     +GN  EA ++
Sbjct: 974 SSKTCNTLLLGFYKSGNEDEASKV 997



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 124/386 (32%), Positives = 197/386 (51%), Gaps = 1/386 (0%)

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
           MV   + P + TY  +I   CK G V   +    EM  K   P++ +YN  + G C++G 
Sbjct: 233 MVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTGA 291

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           + EA  +   +  + L P   TY  L+DG C+    + A+ + E+M + G+ P+  TYT 
Sbjct: 292 VDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTA 351

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           +++G  K GN+  A    +EM+ +GL+ +   Y   I G  K G+ ++A  L  EML  G
Sbjct: 352 LIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAG 411

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
             PD  TYN+L+ G  K   + +A ELL +M      P   TY+ +I       DL++  
Sbjct: 412 LEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKAN 471

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           ++ + M+R G+ P +  Y  LI A+    R E+A      M   G+ P++  YN LI GL
Sbjct: 472 EVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGL 531

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
           CR +++++A  L +DM E+GI PN +TY   IN    +G  Q A R +K+ML   I P+ 
Sbjct: 532 CRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNN 591

Query: 699 CTHSALLLKQLDKDYKVHAVEYLESL 724
             ++ L+    D    V A+   + +
Sbjct: 592 VIYTILIKGHCDVGNTVEALSTFKCM 617



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/407 (31%), Positives = 212/407 (52%), Gaps = 1/407 (0%)

Query: 191  QCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTML 250
            + L  F  ML  GL+PD++  + II  L  NG + +A  V+    + G+ P +  YN+++
Sbjct: 609  EALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLI 668

Query: 251  DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
              FCKEG++++A +L  EM   G +PN V YN LI G  + GE+ +AR L  ++ +  L 
Sbjct: 669  SGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLV 728

Query: 311  VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
                +Y+ II GY + G L EA  L +EM+++G++P    Y ILI G  K G +  A   
Sbjct: 729  PDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSL 788

Query: 371  FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
            F E  +K+V   + ++N+L+  +C+ G + EA  LFD++  + L P +VTY  LID   +
Sbjct: 789  FHEAQQKSV-GSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGK 847

Query: 431  YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
               +E A+QL  +M  + I+P+ +TYT ++    ++GN       F +M  +G+  D  A
Sbjct: 848  AEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIA 907

Query: 491  YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
            Y    +   K G + EA +L  + L +G   +   ++ L+  LCK   +    ELL +M 
Sbjct: 908  YGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMG 967

Query: 551  GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
             +       T  +++    + G+      +   M R G  PT ++ T
Sbjct: 968  KEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLT 1014



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/428 (25%), Positives = 207/428 (48%), Gaps = 23/428 (5%)

Query: 317 NP-IICGYSEKGLLVEALNLEEEM---VTRGVAPT-LATYNILIYGLCKWGRVSDARHRF 371
           NP I+C   +K  + +++ L+       ++   P  L +Y+IL   LC  G +  A +  
Sbjct: 84  NPEIVCSVLQKSEIDDSVRLQNFFYWSSSKMSTPQYLHSYSILAIRLCNSGLIHQADNML 143

Query: 372 FEMLRKNVIP-----------------DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
            ++L+    P                 ++  ++  +  +   G + EA  +F    S   
Sbjct: 144 EKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGF 203

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            PT++  N L+  L +   + +  ++  +M+   I+PDV TYT ++   CK+G++   + 
Sbjct: 204 FPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKM 263

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
             +EM  K  +P+ F Y   I G  + G   EA  +++ M+ KG  PD  TY +LV G C
Sbjct: 264 VLSEM-EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFC 322

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           K    +EA  +   M   G  P+  TYT++I   ++ G++     + + M+ +GL   +V
Sbjct: 323 KQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVV 382

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           TY  +I   A  G +  A   F+EM + G+ P+  TYN LI+G  +   + +A  L  +M
Sbjct: 383 TYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEM 442

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYK 714
           +   + P+ +TY++LI+  C++ + Q+A  +  +M+   ++P+   +  L+   + +   
Sbjct: 443 KARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRY 502

Query: 715 VHAVEYLE 722
             A+E L+
Sbjct: 503 EMAIELLK 510



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 163/349 (46%), Gaps = 36/349 (10%)

Query: 183  YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
            + K+  +E+   ++++ML NG+ P++   N +I  L   G   KARE++  + E  + P 
Sbjct: 671  FCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPD 730

Query: 243  IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            +VTY+T++D +CK G + EA +L  EM  +G SP+G  Y +LI G  + G LE+A  L  
Sbjct: 731  VVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFH 790

Query: 303  DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            +  +  +  S  ++N +I  + + G ++EA  L ++MV + + P + TY ILI    K  
Sbjct: 791  EAQQKSVG-SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAE 849

Query: 363  RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY- 421
             + +A   F +M  +N+IP+ ++Y +LL  Y + GN  +   LF ++ +R +    + Y 
Sbjct: 850  MMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYG 909

Query: 422  ----------------------------------NTLIDGLCRYGDLEVAQQLKENMINQ 447
                                              + LI  LC+   +    +L   M  +
Sbjct: 910  VMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKE 969

Query: 448  GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
             +     T   ++ G  K GN   A +    M R G  P   + T  I+
Sbjct: 970  ELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTDSIS 1018



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 60/302 (19%), Positives = 125/302 (41%), Gaps = 50/302 (16%)

Query: 119  GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
            G+  D +++C +++   + G               N+   L +       S  S+   + 
Sbjct: 761  GISPDGYIYCILIDGCGKEG---------------NLEKALSLFHEAQQKSVGSLSAFNS 805

Query: 179  LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
            L+  + K   V +   +F+ M+   L P++     +I          +A +++  M    
Sbjct: 806  LIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRN 865

Query: 239  IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
            I P+ +TY ++L S+ + G   + + L  +M+ RG + + + Y V+ + + + G+  +A 
Sbjct: 866  IIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEAL 925

Query: 299  GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
             L+                           LVE + LE+++           ++ LI+ L
Sbjct: 926  KLLNKS------------------------LVEGIKLEDDV-----------FDALIFHL 950

Query: 359  CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
            CK  ++S       EM ++ +     + NTLL G+ +SGN  EA  +   ++    VPT 
Sbjct: 951  CKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTS 1010

Query: 419  VT 420
            ++
Sbjct: 1011 LS 1012


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  305 bits (782), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 183/618 (29%), Positives = 314/618 (50%), Gaps = 52/618 (8%)

Query: 104 PRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGIL---- 159
           P+ AL FF +     G +     +C ++  LI SG +  A  ++  ++   +  +     
Sbjct: 159 PKTALNFFYFASDSCGFRFTLRSYCVLMRSLIVSGFVSPARLLLIRLIDRKLPVLFGDPK 218

Query: 160 --DVLIGGGLS-------SCVSIKILDLLLLIYT---KKSMVEQCLLVFNKMLRNGLLPD 207
              + I   ++       S V++  +DLL+ +Y    +       + VF  +   G+ P 
Sbjct: 219 NRHIEIASAMADLNEVGESGVAVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPT 278

Query: 208 VKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLW 267
           VK C  ++  L       K+  V+  M + G+ P +  ++T +++FCK G++++A++L +
Sbjct: 279 VKTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQLFF 337

Query: 268 EMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKG 327
           +M+  G SPN VTYN LI G  ++G L++A                              
Sbjct: 338 DMEKLGVSPNVVTYNNLIHGLCKHGNLDEA------------------------------ 367

Query: 328 LLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYN 387
                   +E+MV  GV  TL TY++LI GL K  + ++A     E L K   P+ + YN
Sbjct: 368 -----FRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYN 422

Query: 388 TLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
           TL+ GYC+ GN+G+A  +  ++ S+ + P  VT N++I G C+ G +E A+ + E M+++
Sbjct: 423 TLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSR 482

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
           G   +   +T +++  C       A  F  EML + ++P+    TT + G  K G  S+A
Sbjct: 483 GFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDA 542

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
             L   +L KGF  +L+T N L+HGLCK G+++EA  LL+KM+  GF+ D ITY ++I  
Sbjct: 543 VELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISG 602

Query: 568 SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
             + G +  G  L   M+++G+ P   TY +LIH     G+L+ A   ++E + + + PN
Sbjct: 603 CCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPN 662

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYK 687
           V TY  +I+G C+  +I++   LF ++  + +  N   Y  LI   C  GN  EA +L+ 
Sbjct: 663 VYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHD 722

Query: 688 EMLDREIEPDYCTHSALL 705
           +M  + I P   T+S+L+
Sbjct: 723 DMRSKGIPPTTATYSSLI 740



 Score =  286 bits (731), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 183/622 (29%), Positives = 296/622 (47%), Gaps = 57/622 (9%)

Query: 105 RIALRFFRWVETQ---PGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDV 161
           R A+  FR++  +   P VK   F    +L  L+++  L  +YWV ET            
Sbjct: 261 RNAIGVFRFLANKGVFPTVKTCTF----LLSSLVKANELEKSYWVFET------------ 304

Query: 162 LIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDN 221
            +  G+S    + +    +  + K   VE  + +F  M + G+ P+V   N +I  L  +
Sbjct: 305 -MRQGVSP--DVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKH 361

Query: 222 G-----------------------FSV------------KAREVYRMMGEFGIKPSIVTY 246
           G                       +SV            +A  V +   E G  P+ V Y
Sbjct: 362 GNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVY 421

Query: 247 NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
           NT++D +CK G + +AL +  +M  +G +PN VT N +I GF + G++EQA  ++ +ML 
Sbjct: 422 NTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLS 481

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
            G  ++  ++  II           AL    EM+ R + P       L+ GLCK G+ SD
Sbjct: 482 RGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSD 541

Query: 367 ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
           A   +F +L K    ++++ N L++G C++GN+ EA  L  ++  R  V   +TYNTLI 
Sbjct: 542 AVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLIS 601

Query: 427 GLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
           G C+ G +E   +L+  M+ QGI PD  TY ++++G C++G L  A   +NE   + L P
Sbjct: 602 GCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVP 661

Query: 487 DRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
           + + Y   I G  K     E  +L  E+L +    + + YN L+   C+ G+  EA +L 
Sbjct: 662 NVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLH 721

Query: 547 RKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAAR 606
             M   G  P   TY+S+IH    +G +   + L + M ++GL P +V YT LI  +   
Sbjct: 722 DDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKL 781

Query: 607 GRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
           G+++       EM    I PN ITY  +I+G  +   +  A  L  +M  +GI+P+  TY
Sbjct: 782 GQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTY 841

Query: 667 TILINENCNAGNWQEALRLYKE 688
            +L N  C  G  +E   L ++
Sbjct: 842 NVLTNGFCKEGKIEEGKLLAED 863



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 133/365 (36%), Positives = 202/365 (55%)

Query: 187 SMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTY 246
           S  E  L    +ML   + P+      ++  L   G    A E++  + E G   ++VT 
Sbjct: 502 SRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTT 561

Query: 247 NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
           N ++   CK G MQEA+ LL +M  RG   + +TYN LI+G  + G++E+   L  +M+K
Sbjct: 562 NALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVK 621

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
            G++    +YN +I G    G L EA+NL  E  +R + P + TY ++I G CK  ++ +
Sbjct: 622 QGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEE 681

Query: 367 ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
               F E+L +N+  + + YNTL+  YCR+GN  EAF L D++RS+ + PT  TY++LI 
Sbjct: 682 GEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIH 741

Query: 427 GLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
           G+C  G +E A+ L + M  +G+LP+V+ YT ++ G CK+G +        EM    + P
Sbjct: 742 GMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHP 801

Query: 487 DRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
           ++  YT  I G  K GD   A +L  EM+ KG  PD +TYNVL +G CK G +EE   L 
Sbjct: 802 NKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGKLLA 861

Query: 547 RKMVG 551
              VG
Sbjct: 862 EDGVG 866


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  305 bits (781), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 177/564 (31%), Positives = 283/564 (50%), Gaps = 12/564 (2%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +L+  +   S +   L  F K+ + GL PDV   N ++  L       +A  ++  M E 
Sbjct: 119 ILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFET 178

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
             +P++VT+ T+++  C+EG + EA+ LL  M   G  P  +TY  ++ G  + G+   A
Sbjct: 179 TCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSA 238

Query: 298 RGLIRDMLKLGLKV-SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
             L+R M ++   + +   Y+ II    + G   +A NL  EM  +G+ P L TYN +I 
Sbjct: 239 LDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIV 298

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           G C  GR SDA     EML + + PD+++YN L+  + + G   EA  L+DE+  R ++P
Sbjct: 299 GFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
             +TY+++IDG C+   L+ A+ +   M  +G  P++IT+  +++G C    +    E  
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELL 418

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           +EM   GL  D   Y T I G   +GD + A  L +EM++ G  PD++T + L+ GLC  
Sbjct: 419 HEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDN 478

Query: 537 GSLEEANELLRKMVG-----------DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           G L++A E+ + M             +G  PD  TY  +I   +  G      +L+  M 
Sbjct: 479 GKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMP 538

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
            +G+ P  +TY+ +I     + RL+ A   F  M  K   PNV+T+  LING C+  R+D
Sbjct: 539 HRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVD 598

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
               LF +M   GI+ N  TY  LI      GN   AL +++EM+   + PD  T   +L
Sbjct: 599 DGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 658

Query: 706 LKQLDKDYKVHAVEYLESLTLGAE 729
                K+    AV  LE L +  +
Sbjct: 659 TGLWSKEELKRAVAMLEKLQMSMD 682



 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 164/564 (29%), Positives = 269/564 (47%), Gaps = 47/564 (8%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +E  + +F+ MLR+  LP V +  +++ V+           +Y+ M    I+  I ++  
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++  FC   ++  AL    ++   G  P+ VT+N L+ G      + +A  L   M +  
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG----------- 357
            + +  ++  ++ G   +G +VEA+ L + M+  G+ PT  TY  ++ G           
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSAL 239

Query: 358 -------------------------LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
                                    LCK GR SDA++ F EM  K + PD+ +YN+++ G
Sbjct: 240 DLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
           +C SG   +A  L  E+  R + P VVTYN LI+   + G    A++L + M+ +GI+P+
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
            ITY+ M++G CK   L  A   F  M  KG  P+   + T I G        +   L  
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           EM   G   D  TYN L+HG   +G L  A +LL++M+  G  PD +T  +++    + G
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479

Query: 573 DLRRGRDLFNNMLRK-----------GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
            L+   ++F  M +            G+ P + TY +LI      G+   A   + EM  
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 539

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
           +GI P+ ITY+++I+GLC+  R+D+A  +F  M  +   PN  T+T LIN  C AG   +
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 599

Query: 682 ALRLYKEMLDREIEPDYCTHSALL 705
            L L+ EM  R I  +  T+  L+
Sbjct: 600 GLELFCEMGRRGIVANAITYITLI 623



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 146/478 (30%), Positives = 242/478 (50%), Gaps = 12/478 (2%)

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           +++A++L  +M      P+ V +  L+    R    +    L + M +  ++   +S+  
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           +I  +     L  AL+   ++   G+ P + T+N L++GLC   RVS+A + F +M    
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
             P+++++ TL+ G CR G I EA  L D +    L PT +TY T++DG+C+ GD   A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSAL 239

Query: 439 QLKENMIN-QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
            L   M     I+P+V+ Y+ +++  CK G  S A+  F EM  KG+ PD F Y + I G
Sbjct: 240 DLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
               G  S+A +L +EML +   PD++TYN L++   K G   EA EL  +M+  G IP+
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
            ITY+S+I    +   L     +F  M  KG SP L+T+  LI  +    R++       
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
           EM   G+  +  TYN LI+G   +  ++ A  L  +M   G+ P+  T   L++  C+ G
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479

Query: 678 NWQEALRLYKEM------LDRE-----IEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
             ++AL ++K M      LD       +EPD  T++ L+   +++   + A E  E +
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 127/420 (30%), Positives = 200/420 (47%), Gaps = 36/420 (8%)

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           G+ E   L +A++L  +M+     P++  +  L+  + +  R       + +M RK +  
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           DI S+  L+  +C    +  A   F ++    L P VVT+NTL+ GLC    +  A  L 
Sbjct: 113 DIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
             M      P+V+T+T ++NG C+ G +  A    + M+  GLQP +  Y T + G  K+
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKI 232

Query: 502 GDT------------------------------------SEAYRLQEEMLAKGFPPDLIT 525
           GDT                                    S+A  L  EM  KG  PDL T
Sbjct: 233 GDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           YN ++ G C  G   +A +LL++M+     PD +TY ++I+A ++ G      +L++ ML
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
            +G+ P  +TY+ +I     + RL+ A   F  M  KG  PN+IT+N LI+G C  +RID
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
               L  +M E G++ +  TY  LI+     G+   AL L +EM+   + PD  T   LL
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 87/207 (42%), Gaps = 38/207 (18%)

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV------------------ 594
           GF  + +   S  H   E+  L    DLF++MLR    P++V                  
Sbjct: 42  GFGGESLKLQSGFH---EIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLV 98

Query: 595 -----------------TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
                            ++T+LI    +  +L  A   F ++   G+ P+V+T+N L++G
Sbjct: 99  ISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHG 158

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           LC   R+ +A  LF  M E    PN  T+T L+N  C  G   EA+ L   M++  ++P 
Sbjct: 159 LCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPT 218

Query: 698 YCTHSALLLKQLDKDYKVHAVEYLESL 724
             T+  ++         V A++ L  +
Sbjct: 219 QITYGTIVDGMCKIGDTVSALDLLRKM 245


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  305 bits (780), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 183/618 (29%), Positives = 314/618 (50%), Gaps = 52/618 (8%)

Query: 104 PRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGIL---- 159
           P+ AL FF +     G +     +C ++  LI SG +  A  ++  ++   +  +     
Sbjct: 92  PKTALNFFYFASDSCGFRFTLRSYCVLMRSLIVSGFVSPARLLLIRLIDRKLPVLFGDPK 151

Query: 160 --DVLIGGGLS-------SCVSIKILDLLLLIYT---KKSMVEQCLLVFNKMLRNGLLPD 207
              + I   ++       S V++  +DLL+ +Y    +       + VF  +   G+ P 
Sbjct: 152 NRHIEIASAMADLNEVGESGVAVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPT 211

Query: 208 VKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLW 267
           VK C  ++  L       K+  V+  M + G+ P +  ++T +++FCK G++++A++L +
Sbjct: 212 VKTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQLFF 270

Query: 268 EMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKG 327
           +M+  G SPN VTYN LI G  ++G L++A                              
Sbjct: 271 DMEKLGVSPNVVTYNNLIHGLCKHGNLDEA------------------------------ 300

Query: 328 LLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYN 387
                   +E+MV  GV  TL TY++LI GL K  + ++A     E L K   P+ + YN
Sbjct: 301 -----FRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYN 355

Query: 388 TLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
           TL+ GYC+ GN+G+A  +  ++ S+ + P  VT N++I G C+ G +E A+ + E M+++
Sbjct: 356 TLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSR 415

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
           G   +   +T +++  C       A  F  EML + ++P+    TT + G  K G  S+A
Sbjct: 416 GFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDA 475

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
             L   +L KGF  +L+T N L+HGLCK G+++EA  LL+KM+  GF+ D ITY ++I  
Sbjct: 476 VELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISG 535

Query: 568 SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
             + G +  G  L   M+++G+ P   TY +LIH     G+L+ A   ++E + + + PN
Sbjct: 536 CCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPN 595

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYK 687
           V TY  +I+G C+  +I++   LF ++  + +  N   Y  LI   C  GN  EA +L+ 
Sbjct: 596 VYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHD 655

Query: 688 EMLDREIEPDYCTHSALL 705
           +M  + I P   T+S+L+
Sbjct: 656 DMRSKGIPPTTATYSSLI 673



 Score =  297 bits (761), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 187/657 (28%), Positives = 315/657 (47%), Gaps = 98/657 (14%)

Query: 105 RIALRFFRWVETQ---PGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDV 161
           R A+  FR++  +   P VK   F    +L  L+++  L  +YWV ET            
Sbjct: 194 RNAIGVFRFLANKGVFPTVKTCTF----LLSSLVKANELEKSYWVFET------------ 237

Query: 162 LIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDN 221
            +  G+S    + +    +  + K   VE  + +F  M + G+ P+V   N +I  L  +
Sbjct: 238 -MRQGVSP--DVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKH 294

Query: 222 G-----------------------FSV------------KAREVYRMMGEFGIKPSIVTY 246
           G                       +SV            +A  V +   E G  P+ V Y
Sbjct: 295 GNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVY 354

Query: 247 NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
           NT++D +CK G + +AL +  +M  +G +PN VT N +I GF + G++EQA  ++ +ML 
Sbjct: 355 NTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLS 414

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
            G  ++  ++  II           AL    EM+ R + P       L+ GLCK G+ SD
Sbjct: 415 RGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSD 474

Query: 367 ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
           A   +F +L K    ++++ N L++G C++GN+ EA  L  ++  R  V   +TYNTLI 
Sbjct: 475 AVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLIS 534

Query: 427 GLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
           G C+ G +E   +L+  M+ QGI PD  TY ++++G C++G L  A   +NE   + L P
Sbjct: 535 GCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVP 594

Query: 487 DRFAYTTQIAGELKL-----------------------------------GDTSEAYRLQ 511
           + + Y   I G  K                                    G+T EA++L 
Sbjct: 595 NVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLH 654

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
           ++M +KG PP   TY+ L+HG+C +G +E+A  L+ +M  +G +P+ + YT++I    ++
Sbjct: 655 DDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKL 714

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
           G + +  ++   M    + P  +TYTV+I  ++  G ++ A     EM  KGI P+ +TY
Sbjct: 715 GQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTY 774

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
           N L NG C+  +I++ + +   M +EG+  ++ TYT L++       WQ+   L  +
Sbjct: 775 NVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVH------GWQQPSALTNQ 825


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  305 bits (780), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 176/566 (31%), Positives = 283/566 (50%), Gaps = 12/566 (2%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
            ++L+  +   S +   L  F K+ + GL PDV     ++  L       +A + +  M 
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMF 176

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
           E   +P++VT+ T+++  C+EG + EA+ LL  M   G  P  +TY  ++ G  + G+  
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236

Query: 296 QARGLIRDMLKLGLKV-SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
            A  L+R M ++   + +   Y+ II    + G   +A NL  EM  +G+ P L TYN +
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           I G C  GR SDA     EML + + PD+++YN L+  + + G   EA  L+DE+  R +
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
           +P  +TY+++IDG C+   L+ A+ +   M  +G  P++IT+  +++G C    +    E
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGME 416

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
             +EM   GL  D   Y T I G   +GD + A  L +EM++ G  PD++T + L+ GLC
Sbjct: 417 LLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC 476

Query: 535 KLGSLEEANELLRKMVG-----------DGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
             G L++A E+ + M             +G  PD  TY  +I   +  G      +L+  
Sbjct: 477 DNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEE 536

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           M  +G+ P  +TY+ +I     + RL+ A   F  M  K   PNV+T+  LING C+  R
Sbjct: 537 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGR 596

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSA 703
           +D    LF +M   GI+ N  TY  LI      GN   AL +++EM+   + PD  T   
Sbjct: 597 VDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRN 656

Query: 704 LLLKQLDKDYKVHAVEYLESLTLGAE 729
           +L     K+    AV  LE L +  +
Sbjct: 657 MLTGLWSKEELKRAVAMLEKLQMSMD 682



 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 163/564 (28%), Positives = 268/564 (47%), Gaps = 47/564 (8%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +E  + +F+ MLR+  LP V +  +++ V+           +Y+ M    I+  I ++N 
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++  FC   ++  AL    ++   G  P+ VT+  L+ G      + +A      M +  
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG----------- 357
            + +  ++  ++ G   +G +VEA+ L + M+  G+ PT  TY  ++ G           
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 358 -------------------------LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
                                    LCK GR SDA++ F EM  K + PD+ +YN+++ G
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
           +C SG   +A  L  E+  R + P VVTYN LI+   + G    A++L + M+ +GI+P+
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
            ITY+ M++G CK   L  A   F  M  KG  P+   + T I G        +   L  
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           EM   G   D  TYN L+HG   +G L  A +LL++M+  G  PD +T  +++    + G
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479

Query: 573 DLRRGRDLFNNMLRK-----------GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
            L+   ++F  M +            G+ P + TY +LI      G+   A   + EM  
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 539

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
           +GI P+ ITY+++I+GLC+  R+D+A  +F  M  +   PN  T+T LIN  C AG   +
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 599

Query: 682 ALRLYKEMLDREIEPDYCTHSALL 705
            L L+ EM  R I  +  T+  L+
Sbjct: 600 GLELFCEMGRRGIVANAITYITLI 623



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 146/478 (30%), Positives = 241/478 (50%), Gaps = 12/478 (2%)

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           +++A++L  +M      P+ V +  L+    R    +    L + M +  ++   +S+N 
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           +I  +     L  AL+   ++   G+ P + T+  L++GLC   RVS+A   F +M    
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
             P+++++ TL+ G CR G I EA  L D +    L PT +TY T++DG+C+ GD   A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 439 QLKENMIN-QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
            L   M     I+P+V+ Y+ +++  CK G  S A+  F EM  KG+ PD F Y + I G
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
               G  S+A +L +EML +   PD++TYN L++   K G   EA EL  +M+  G IP+
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
            ITY+S+I    +   L     +F  M  KG SP L+T+  LI  +    R++       
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
           EM   G+  +  TYN LI+G   +  ++ A  L  +M   G+ P+  T   L++  C+ G
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479

Query: 678 NWQEALRLYKEM------LDRE-----IEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
             ++AL ++K M      LD       +EPD  T++ L+   +++   + A E  E +
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 126/420 (30%), Positives = 198/420 (47%), Gaps = 36/420 (8%)

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           G+ E   L +A++L  +M+     P++  +  L+  + +  R       + +M RK +  
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           DI S+N L+  +C    +  A   F ++    L P VVT+ TL+ GLC    +  A    
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFF 172

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
             M      P+V+T+T ++NG C+ G +  A    + M+  GLQP +  Y T + G  K 
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 502 GDT------------------------------------SEAYRLQEEMLAKGFPPDLIT 525
           GDT                                    S+A  L  EM  KG  PDL T
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           YN ++ G C  G   +A +LL++M+     PD +TY ++I+A ++ G      +L++ ML
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
            +G+ P  +TY+ +I     + RL+ A   F  M  KG  PN+IT+N LI+G C  +RID
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
               L  +M E G++ +  TY  LI+     G+   AL L +EM+   + PD  T   LL
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 84/207 (40%), Gaps = 38/207 (18%)

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV------------------ 594
           GF  + +   S  H   E+  L    DLF++MLR    P++V                  
Sbjct: 42  GFGGESLKLQSGFH---EIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLV 98

Query: 595 -----------------TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
                            ++ +LI    +  +L  A   F ++   G+ P+V+T+  L++G
Sbjct: 99  ISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHG 158

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           LC   R+ +A   F  M E    PN  T+T L+N  C  G   EA+ L   M++  ++P 
Sbjct: 159 LCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPT 218

Query: 698 YCTHSALLLKQLDKDYKVHAVEYLESL 724
             T+  ++     K   V A+  L  +
Sbjct: 219 QITYGTIVDGMCKKGDTVSALNLLRKM 245


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  305 bits (780), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 190/616 (30%), Positives = 309/616 (50%), Gaps = 28/616 (4%)

Query: 90  PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVET 149
           P  + ++L  +RE P++AL+FF+W  +Q G +     +C I+ ++  + +   A+  V+ 
Sbjct: 70  PIWVSKILLGLREDPKLALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKE 129

Query: 150 VVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVK 209
           V+   M+  +D+    G   C    I D+L   ++ +++      VF+ +          
Sbjct: 130 VI---MNSRMDM----GFPVC---NIFDML---WSTRNICVSGSGVFDVLF--------- 167

Query: 210 NCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM 269
                  V  + G   +A E +  M  F   P   + N +L    K G  Q   +   +M
Sbjct: 168 ------SVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 221

Query: 270 QGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLL 329
            G G +P+  TYNV+I    + G+LE +R L   M ++GL     +YN +I GY + G L
Sbjct: 222 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 281

Query: 330 VEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTL 389
            E  +L  EM   G  P + TYN LI   CK+ ++  A   F EM    + P++++Y+TL
Sbjct: 282 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTL 341

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
           +  +C+ G +  A  L  ++R   L+P   TY +LID  C+ G+L  A +L  +M+  G+
Sbjct: 342 IDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGV 401

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
             +++TYT +++G CK G +  A E F  ML+ G+ P++  YT  + G +K     +A +
Sbjct: 402 KLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMK 461

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           + ++M      PDLI Y  ++ G C    LEE   +L +M   G   + +  T+II A  
Sbjct: 462 ILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYF 521

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
           + G      + F  M   G+  T+VTY VLI      G +ELA  YF  M   G++PNV 
Sbjct: 522 KAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVA 581

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
            Y +LI+GLC    I+ A  LF +M+  G+ P+   +T LI+ N   GN QEAL L   M
Sbjct: 582 VYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRM 641

Query: 690 LDREIEPDYCTHSALL 705
            +  IE D   +++L+
Sbjct: 642 TELAIEFDLHVYTSLV 657



 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 139/438 (31%), Positives = 234/438 (53%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K   +E+   +FN+M   G +PD+   N +I          +A E +  M   G+KP+
Sbjct: 275 YGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPN 334

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +VTY+T++D+FCKEG MQ A++LL +M+  G  PN  TY  LI    + G L +A  L+ 
Sbjct: 335 VVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLN 394

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           DML+ G+K++  +Y  ++ G  + G ++EA  +   M+  G++P    Y  L++G  K  
Sbjct: 395 DMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAE 454

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R+ DA     +M   N+ PD+I Y ++++G+C    + E  L+ +E++SR +    V   
Sbjct: 455 RMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVIST 514

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           T+ID   + G    A    + M + G+   ++TY ++++G C+ G + +A ++F  ML  
Sbjct: 515 TIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSL 574

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           GLQP+   YT+ I G         A +L +EM  +G  PD+  +  L+ G  K G+L+EA
Sbjct: 575 GLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEA 634

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             L+ +M       D   YTS++    + G+L + R  FN M+ KG+ P  V    L+  
Sbjct: 635 LVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLRE 694

Query: 603 HAARGRLELAFMYFSEMQ 620
           +  RG+L+ A    +EM+
Sbjct: 695 YYKRGQLDEAIELKNEME 712



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 163/323 (50%), Gaps = 2/323 (0%)

Query: 405 LFDELRS-RNL-VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
           +FD L S RN+ V     ++ L       G LE A +    M N   LP   +   +++ 
Sbjct: 145 IFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHR 204

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
             K GN  + R+FFN+M+  G+ P  F Y   I    K GD   + RL  +M   G  PD
Sbjct: 205 LSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPD 264

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
           ++TYN L+ G  K+GSLEE   L  +M   G +PD ITY  +I+   +   + R  + F+
Sbjct: 265 VVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFS 324

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
            M   GL P +VTY+ LI A    G ++ A     +M+  G+ PN  TY +LI+  C+  
Sbjct: 325 EMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAG 384

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
            + +A+ L  DM + G+  N  TYT L++  C AG   EA  +++ ML   I P+   ++
Sbjct: 385 NLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYT 444

Query: 703 ALLLKQLDKDYKVHAVEYLESLT 725
           AL+   +  +    A++ L+ +T
Sbjct: 445 ALVHGYIKAERMEDAMKILKQMT 467


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  304 bits (779), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 176/566 (31%), Positives = 283/566 (50%), Gaps = 12/566 (2%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
            ++L+  +   S +   L  F K+ + GL PDV     ++  L       +A  ++  M 
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMF 176

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
           E   +P++VT+ T+++  C+EG + EA+ LL  M   G  P  +TY  ++ G  + G+  
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236

Query: 296 QARGLIRDMLKLGLKV-SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
            A  L+R M ++   + +   Y+ II    + G   +A NL  EM  +G+ P L TYN +
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           I G C  GR SDA     EML + + PD+++YN L+  + + G   EA  L+DE+  R +
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
           +P  +TY+++IDG C+   L+ A+ +   M  +G  P++IT+  +++G C    +    E
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGME 416

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
             +EM   GL  D   Y T I G   +GD + A  L +EM++ G  PD++T + L+ GLC
Sbjct: 417 LLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC 476

Query: 535 KLGSLEEANELLRKMVG-----------DGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
             G L++A E+ + M             +G  PD  TY  +I   +  G      +L+  
Sbjct: 477 DNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEE 536

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           M  +G+ P  +TY+ +I     + RL+ A   F  M  K   PNV+T+  LING C+  R
Sbjct: 537 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGR 596

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSA 703
           +D    LF +M   GI+ N  TY  LI      GN   AL +++EM+   + PD  T   
Sbjct: 597 VDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRN 656

Query: 704 LLLKQLDKDYKVHAVEYLESLTLGAE 729
           +L     K+    AV  LE L +  +
Sbjct: 657 MLTGLWSKEELKRAVAMLEKLQMSMD 682



 Score =  268 bits (685), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 164/564 (29%), Positives = 269/564 (47%), Gaps = 47/564 (8%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +E  + +F+ MLR+  LP V +  +++ V+           +Y+ M    I+  I ++N 
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++  FC   ++  AL    ++   G  P+ VT+  L+ G      + +A  L   M +  
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG----------- 357
            + +  ++  ++ G   +G +VEA+ L + M+  G+ PT  TY  ++ G           
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 358 -------------------------LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
                                    LCK GR SDA++ F EM  K + PD+ +YN+++ G
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
           +C SG   +A  L  E+  R + P VVTYN LI+   + G    A++L + M+ +GI+P+
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
            ITY+ M++G CK   L  A   F  M  KG  P+   + T I G        +   L  
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           EM   G   D  TYN L+HG   +G L  A +LL++M+  G  PD +T  +++    + G
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479

Query: 573 DLRRGRDLFNNMLRK-----------GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
            L+   ++F  M +            G+ P + TY +LI      G+   A   + EM  
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 539

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
           +GI P+ ITY+++I+GLC+  R+D+A  +F  M  +   PN  T+T LIN  C AG   +
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 599

Query: 682 ALRLYKEMLDREIEPDYCTHSALL 705
            L L+ EM  R I  +  T+  L+
Sbjct: 600 GLELFCEMGRRGIVANAITYITLI 623



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 146/478 (30%), Positives = 242/478 (50%), Gaps = 12/478 (2%)

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           +++A++L  +M      P+ V +  L+    R    +    L + M +  ++   +S+N 
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           +I  +     L  AL+   ++   G+ P + T+  L++GLC   RVS+A + F +M    
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
             P+++++ TL+ G CR G I EA  L D +    L PT +TY T++DG+C+ GD   A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 439 QLKENMIN-QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
            L   M     I+P+V+ Y+ +++  CK G  S A+  F EM  KG+ PD F Y + I G
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
               G  S+A +L +EML +   PD++TYN L++   K G   EA EL  +M+  G IP+
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
            ITY+S+I    +   L     +F  M  KG SP L+T+  LI  +    R++       
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
           EM   G+  +  TYN LI+G   +  ++ A  L  +M   G+ P+  T   L++  C+ G
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479

Query: 678 NWQEALRLYKEM------LDRE-----IEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
             ++AL ++K M      LD       +EPD  T++ L+   +++   + A E  E +
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/420 (30%), Positives = 199/420 (47%), Gaps = 36/420 (8%)

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           G+ E   L +A++L  +M+     P++  +  L+  + +  R       + +M RK +  
Sbjct: 53  GFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC 112

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           DI S+N L+  +C    +  A   F ++    L P VVT+ TL+ GLC    +  A  L 
Sbjct: 113 DIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLF 172

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
             M      P+V+T+T ++NG C+ G +  A    + M+  GLQP +  Y T + G  K 
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232

Query: 502 GDT------------------------------------SEAYRLQEEMLAKGFPPDLIT 525
           GDT                                    S+A  L  EM  KG  PDL T
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           YN ++ G C  G   +A +LL++M+     PD +TY ++I+A ++ G      +L++ ML
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
            +G+ P  +TY+ +I     + RL+ A   F  M  KG  PN+IT+N LI+G C  +RID
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
               L  +M E G++ +  TY  LI+     G+   AL L +EM+   + PD  T   LL
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 85/207 (41%), Gaps = 38/207 (18%)

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV------------------ 594
           GF  + +   S  H   E+  L    DLF++MLR    P++V                  
Sbjct: 42  GFGGESLKLQSGFH---EIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLV 98

Query: 595 -----------------TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
                            ++ +LI    +  +L  A   F ++   G+ P+V+T+  L++G
Sbjct: 99  ISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHG 158

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           LC   R+ +A  LF  M E    PN  T+T L+N  C  G   EA+ L   M++  ++P 
Sbjct: 159 LCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPT 218

Query: 698 YCTHSALLLKQLDKDYKVHAVEYLESL 724
             T+  ++     K   V A+  L  +
Sbjct: 219 QITYGTIVDGMCKKGDTVSALNLLRKM 245


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  304 bits (779), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 169/528 (32%), Positives = 279/528 (52%), Gaps = 3/528 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F++ML   L PDV   N+++  L   GF +++  ++  + + G+ P++ T+N  +   C
Sbjct: 282 LFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLC 341

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           KEG +  A+ LL  +   G  P+ VTYN +I G  R   + +A   +  M+  G + +  
Sbjct: 342 KEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDF 401

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +YN II GY +KG++V+A  + ++ V +G  P   TY  L+ G C+ G    A   F + 
Sbjct: 402 TYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDG 461

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           L K + P II YNTL+ G C+ G I  A  L +E+  +   P + TYN +I+GLC+ G L
Sbjct: 462 LGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCL 521

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
             A  L  + I +G +PD+ TY  +V+G C+   L  A E  N M  +G+ PD   Y T 
Sbjct: 522 SDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTL 581

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           + G  K   + E   + + M  KG  P++ITYN ++  LC    + EA +LL +M   G 
Sbjct: 582 LNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGL 641

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK-GLSPTLVTYTVLIHAHAARGRLELAF 613
            PD +++ ++I    ++GDL     LF  M ++  +S T  TY ++I A + +  +++A 
Sbjct: 642 TPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMAL 701

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
             FSEM+  G  P+  TY  LI+G C+   ++Q Y   ++  E+G +P+  T+  ++N  
Sbjct: 702 RLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCL 761

Query: 674 CNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYL 721
           C     QEA+ +   M+ ++I PD  T + +           HA E+L
Sbjct: 762 CVEHKVQEAVGIIHLMVQKDIVPD--TVNTIFEADKKGHITYHAYEFL 807



 Score =  303 bits (776), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 164/507 (32%), Positives = 271/507 (53%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y +K  +++ +  F +M      P V + N I+ +L + G+  +A +VY  M +  ++  
Sbjct: 165 YGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESD 224

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           + TY   + SFC+ G    AL LL  M   GC  N V Y  ++TGF   G+ ++AR L  
Sbjct: 225 VYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFD 284

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +ML+  L     ++N ++    +KG ++E+  L ++++ RGV P L T+NI I GLCK G
Sbjct: 285 EMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEG 344

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            +  A      + R+ + PD+++YNT++ G CR   + EA     ++ +    P   TYN
Sbjct: 345 SLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYN 404

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           ++IDG C+ G +  A ++ ++ + +G  PD  TY  +VNG C+ G+   A   F + L K
Sbjct: 405 SIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGK 464

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           GL+P    Y T I G  + G    A +L  EM  KG  PD+ TYN++++GLCK+G L +A
Sbjct: 465 GLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDA 524

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
           N L+   +  G IPD  TY +++        L    +L N M  +G++P ++TY  L++ 
Sbjct: 525 NHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNG 584

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
                + E     F  M  KG  PN+ITYN +I  LC  +++++A  L  +M+ +G+ P+
Sbjct: 585 LCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPD 644

Query: 663 KYTYTILINENCNAGNWQEALRLYKEM 689
             ++  LI   C  G+   A  L++ M
Sbjct: 645 VVSFGTLITGFCKVGDLDGAYGLFRGM 671



 Score =  275 bits (703), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 151/480 (31%), Positives = 251/480 (52%)

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           +A + +  M  F   PS+ +YN +++   + G   +A ++   M+ +    +  TY + I
Sbjct: 173 EAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRI 232

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
             F R G    A  L+R+M  LG   +A +Y  ++ G+ E G    A  L +EM+   + 
Sbjct: 233 KSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLC 292

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P + T+N L++ LCK G V ++   F ++L++ V P++ ++N  + G C+ G++  A  L
Sbjct: 293 PDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRL 352

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
              +    L P VVTYNT+I GLCR   +  A++    M+N G  P+  TY  +++G CK
Sbjct: 353 LGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCK 412

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
            G +  A     + + KG +PD F Y + + G  + GD  +A  + ++ L KG  P +I 
Sbjct: 413 KGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIV 472

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           YN L+ GLC+ G +  A +L+ +M   G  PD  TY  II+   +MG L     L  + +
Sbjct: 473 YNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAI 532

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
            KG  P + TY  L+  +  + +L+ A    + M  +G+ P+VITYN L+NGLC+  + +
Sbjct: 533 TKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSE 592

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +   +F  M E+G  PN  TY  +I   CN+    EA+ L  EM  + + PD  +   L+
Sbjct: 593 EVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLI 652



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 153/494 (30%), Positives = 252/494 (51%), Gaps = 1/494 (0%)

Query: 170 CVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE 229
           C  +   + L+    KK  V +   +F+K+L+ G+ P++   N  I+ L   G   +A  
Sbjct: 292 CPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVR 351

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           +   +   G++P +VTYNT++   C++  + EA E L +M   G  PN  TYN +I G+ 
Sbjct: 352 LLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYC 411

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           + G +  A  +++D +  G K    +Y  ++ G+ + G   +A+ + ++ + +G+ P++ 
Sbjct: 412 KKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSII 471

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
            YN LI GLC+ G +  A     EM  K   PDI +YN ++ G C+ G + +A  L  + 
Sbjct: 472 VYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDA 531

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
            ++  +P + TYNTL+DG CR   L+ A +L   M +QG+ PDVITY  ++NG CK    
Sbjct: 532 ITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKS 591

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
               E F  M  KG  P+   Y T I         +EA  L  EM +KG  PD++++  L
Sbjct: 592 EEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTL 651

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHI-TYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           + G CK+G L+ A  L R M     +     TY  II A  E  +++    LF+ M + G
Sbjct: 652 ITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNG 711

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
             P   TY VLI      G +   + +  E   KG  P++ T+  ++N LC   ++ +A 
Sbjct: 712 CDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAV 771

Query: 649 GLFIDMEEEGILPN 662
           G+   M ++ I+P+
Sbjct: 772 GIIHLMVQKDIVPD 785



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 112/442 (25%), Positives = 189/442 (42%), Gaps = 85/442 (19%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G K DEF +C+++    + G    A                                   
Sbjct: 430 GFKPDEFTYCSLVNGFCQDGDPDQA----------------------------------- 454

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
                         + VF   L  GL P +   N +IK L   G  + A ++   M E G
Sbjct: 455 --------------MAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKG 500

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
            KP I TYN +++  CK G + +A  L+ +   +GC P+  TYN L+ G+ R  +L+ A 
Sbjct: 501 CKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAI 560

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L+  M   G+     +YN ++ G  +     E + + + M  +G AP + TYN +I  L
Sbjct: 561 ELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESL 620

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR-NLVPT 417
           C   +V++A     EM  K + PD++S+ TL+ G+C+ G++  A+ LF  +  + ++  T
Sbjct: 621 CNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHT 680

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
             TYN +I       ++++A +L   M   G  PD  TY ++++G CK GN++   +F  
Sbjct: 681 TATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLL 740

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           E +                                    KGF P L T+  +++ LC   
Sbjct: 741 ENIE-----------------------------------KGFIPSLTTFGRVLNCLCVEH 765

Query: 538 SLEEANELLRKMVGDGFIPDHI 559
            ++EA  ++  MV    +PD +
Sbjct: 766 KVQEAVGIIHLMVQKDIVPDTV 787



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/315 (22%), Positives = 127/315 (40%), Gaps = 40/315 (12%)

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENM---INQGILPDVITYTIMVNGSCKMGNLSMAR 473
           T+ TY +++  L  +G     + L   M   ++  +L  V    +   G  + G +  A 
Sbjct: 118 TLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRFYG--RKGKIQEAV 175

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
           + F  M      P  ++Y   +   ++ G  ++A+++   M  K    D+ TY + +   
Sbjct: 176 DTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSF 235

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
           C+ G    A  LLR M   G   + + Y +++    E GD  R R+LF+ ML   L P  
Sbjct: 236 CRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCP-- 293

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
                                            +V T+N L++ LC+   + ++  LF  
Sbjct: 294 ---------------------------------DVTTFNKLVHALCKKGFVLESERLFDK 320

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDY 713
           + + G+ PN +T+ I I   C  G+   A+RL   +    + PD  T++ ++     K  
Sbjct: 321 VLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSR 380

Query: 714 KVHAVEYLESLTLGA 728
            V A E L  +  G 
Sbjct: 381 VVEAEECLHKMVNGG 395


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 175/559 (31%), Positives = 291/559 (52%), Gaps = 35/559 (6%)

Query: 174 KILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRM 233
           ++ DLL+  YT+     +    F  +L + +       N ++ VL   G+   A+E YR+
Sbjct: 88  QVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEAYRL 147

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           +     + +  T N M+ S+CK  E   A  ++ EM+ R   P+ VT+NVLI    R G+
Sbjct: 148 VLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGD 207

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           ++ A  L+  M   GLK    +YN ++ G  +     +A  +   M    VAP + ++NI
Sbjct: 208 VDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNI 267

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY---------------------- 391
           LI G C+ G V +A   + EM  + V PD++S++ L+                       
Sbjct: 268 LIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLG 327

Query: 392 -------------GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
                        G+CR+G++ EA  + DE+     +P VVTYNTL++GLC+   L  A+
Sbjct: 328 LVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAE 387

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
           +L   M  +G+ PD+ T+T +++G C+ GN   A + F+ +LR+ L+PD   Y + I G 
Sbjct: 388 KLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGM 447

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
            + GD ++A  L ++M A+   P+ ITY++L+   C+ G +E+A   L +MV  G +P+ 
Sbjct: 448 CRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNI 507

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
            TY SII      G++++G+     M +  + P L+T+  LIH +     +  AF  F+ 
Sbjct: 508 RTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNI 567

Query: 619 MQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGN 678
           M+ + +RP+ +TYN +ING      +  A  +F  M + GI P++YTY  LIN +  AGN
Sbjct: 568 MEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGN 627

Query: 679 WQEALRLYKEMLDREIEPD 697
            ++A +L+ EM+ R   PD
Sbjct: 628 SKQAFQLHDEMIHRGFAPD 646



 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 168/575 (29%), Positives = 290/575 (50%), Gaps = 22/575 (3%)

Query: 91  ELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESG---LLRSAYWVV 147
           +LL+R   + R KPR A   FR +     V         +L +L  +G   L + AY +V
Sbjct: 91  DLLIRTYTQSR-KPREAFEAFRLLLDHR-VPVPASASNALLAVLSRAGWPHLAQEAYRLV 148

Query: 148 ETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPD 207
            +                   S V+   L++++  Y K    +    V ++M +  + PD
Sbjct: 149 LSS-----------------DSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPD 191

Query: 208 VKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLW 267
           V   N +I      G    A  +   M   G+KP IVTYN++L   CK     +A E+  
Sbjct: 192 VVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFR 251

Query: 268 EMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKG 327
            M     +P+  ++N+LI GF R GE+++A    ++M    +     S++ +I  +S +G
Sbjct: 252 TMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRG 311

Query: 328 LLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYN 387
            +  A     EM   G+ P    Y ++I G C+ G +S+A     EM+    +PD+++YN
Sbjct: 312 EMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYN 371

Query: 388 TLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
           TLL G C+   + +A  L +E+  R + P + T+ TLI G CR G+ E A QL + ++ Q
Sbjct: 372 TLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQ 431

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
            + PDV+TY  +++G C+ G+L+ A E +++M  + + P+   Y+  I    + G   +A
Sbjct: 432 RLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDA 491

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
           +   +EM+ KG  P++ TYN ++ G C+ G++++  + L+KM  D   PD IT+ ++IH 
Sbjct: 492 FGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHG 551

Query: 568 SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
            ++  ++    ++FN M ++ + P  VTY ++I+  + +G ++ A   F  M   GI P+
Sbjct: 552 YIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPD 611

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
             TY +LING        QA+ L  +M   G  P+
Sbjct: 612 RYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPD 646



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 132/507 (26%), Positives = 229/507 (45%), Gaps = 55/507 (10%)

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           +G  G +PS         +    G   E   LL  M  R              G SR   
Sbjct: 28  IGTIGARPSTAALAAAATAAAAAGRASECQSLLLRMSRR-------------RGASR--- 71

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
               R ++  +L          ++ +I  Y++     EA      ++   V    +  N 
Sbjct: 72  ----REIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNA 127

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           L+  L + G    A+  +  +L  +   +  + N +++ YC++     A  +  E+  R 
Sbjct: 128 LLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRC 187

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           + P VVT+N LID   R GD++ A  L ++M N+G+ P ++TY  ++ G CK      A+
Sbjct: 188 VFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAK 247

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK---------------- 517
           E F  M +  + PD  ++   I G  ++G+  EA +  +EM  +                
Sbjct: 248 EVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLF 307

Query: 518 -------------------GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
                              G  PD + Y +++ G C+ GS+ EA  +  +MVG G +PD 
Sbjct: 308 SRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDV 367

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
           +TY ++++   +   L     L N M  +G++P L T+T LIH +  +G  E A   F  
Sbjct: 368 VTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDT 427

Query: 619 MQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGN 678
           +  + +RP+V+TYN+LI+G+CR   + +A  L+ DM    ILPN  TY+ILI+ +C  G 
Sbjct: 428 LLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQ 487

Query: 679 WQEALRLYKEMLDREIEPDYCTHSALL 705
            ++A     EM+ +   P+  T+++++
Sbjct: 488 VEDAFGFLDEMVKKGNLPNIRTYNSII 514


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 189/578 (32%), Positives = 301/578 (52%), Gaps = 22/578 (3%)

Query: 123 DEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLI 182
           D +    +L  L++SG +  A+  VE ++   + G+ D+       S  +I I  L    
Sbjct: 15  DAYTVGILLRSLLKSGKIEKAHRFVEQLL---VKGLCDI-------STFNIYISGL---- 60

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
             + S +     VF+ M ++G  P+    N ++  L + G    A+ +Y  M + G  P 
Sbjct: 61  -CRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPD 119

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +VTYNT+L  FCK G++ EAL++      RG  P+ VTYN LI GF +  +L++A+ +++
Sbjct: 120 VVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQ 179

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK-W 361
            M+   L     +YN ++ G  + G + EA  L   +V +G +P + TY+ LI GLC+  
Sbjct: 180 RMVSESLVPDVVTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCREL 236

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
            R+  AR    +M+     PDI+SYN L++G  R   + EA  LF  +  +   P V TY
Sbjct: 237 RRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTY 296

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           N LIDGL +   +  A +L   ++  G+ PD ITYT+ ++G CK G +  A     +M  
Sbjct: 297 NILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDE 356

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
           KG  PD  ++   I G  K     EA  L   M AKG  P+ I++N L+ G C+ G  ++
Sbjct: 357 KGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKK 416

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHA---SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           A    ++M+  G  P  +TY  ++     + + G ++    LF+ M+ KG  P +VTY+ 
Sbjct: 417 AMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSA 476

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           LI      G+L+ A      M+ KG  PNV TYN+LI+GLC L ++D+A  LF+ M E+G
Sbjct: 477 LIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKG 536

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
            +P+  TY  +I+  C      +AL L+   L+  + P
Sbjct: 537 CVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVP 574



 Score =  298 bits (762), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 153/432 (35%), Positives = 250/432 (57%), Gaps = 5/432 (1%)

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
           SP+  T  +L+    ++G++E+A   +  +L  GL     ++N  I G      + +A  
Sbjct: 13  SPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGL-CDISTFNIYISGLCRASRIGDAQT 71

Query: 335 LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
           + + M   G  P   TYN L+ GLC  GR+SDA+  +  M++    PD+++YNTLL+G+C
Sbjct: 72  VFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFC 131

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
           + G + EA  +FD    R  VP VVTYN LI+G C+   L+ AQ++ + M+++ ++PDV+
Sbjct: 132 KVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVV 191

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK-LGDTSEAYRLQEE 513
           TY  +VNG CK G +  AR     ++ KG  P+   Y+T I+G  + L     A +L E+
Sbjct: 192 TYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRRLESARQLLEK 248

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           M+  G  PD+++YN L+HGL +   + EA +L   ++  G+ P+  TY  +I   L+   
Sbjct: 249 MVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDR 308

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
           +    +LF+ +++ GL P  +TYTV I      GR+E A +   +M  KG  P+V+++NA
Sbjct: 309 VNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNA 368

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
           +INGLC+ +R+D+A  L   ME +G  PN  ++  LI   C AG W++A+  +KEML R 
Sbjct: 369 VINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRG 428

Query: 694 IEPDYCTHSALL 705
           ++P   T++ L+
Sbjct: 429 VKPTVVTYNILV 440



 Score =  293 bits (749), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 171/525 (32%), Positives = 286/525 (54%), Gaps = 15/525 (2%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKP--SIVTYNTMLDS 252
           V++K++R    PD      +++ L  +G   K  + +R + +  +K    I T+N  +  
Sbjct: 4   VYDKLVRI-YSPDAYTVGILLRSLLKSG---KIEKAHRFVEQLLVKGLCDISTFNIYISG 59

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
            C+   + +A  +   M+  G  PN +TYN L++G    G +  A+ L   M+K G    
Sbjct: 60  LCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPD 119

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
             +YN ++ G+ + G L EAL + +  V RG  P + TYN LI G CK  ++ +A+    
Sbjct: 120 VVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQ 179

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR-Y 431
            M+ ++++PD+++YN+L+ G C++G + EA +L   +  +   P V+TY+TLI GLCR  
Sbjct: 180 RMVSESLVPDVVTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCREL 236

Query: 432 GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAY 491
             LE A+QL E M+  G  PD+++Y  +++G  +   +S A + F  +LR+G +P+   Y
Sbjct: 237 RRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTY 296

Query: 492 TTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
              I G LK    +EA+ L   ++  G  PD ITY V + GLCK G +E+A  +L+ M  
Sbjct: 297 NILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDE 356

Query: 552 DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLEL 611
            G +PD +++ ++I+   +   +     L + M  KG SP  +++  LI      G+ + 
Sbjct: 357 KGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKK 416

Query: 612 AFMYFSEMQVKGIRPNVITYNALINGLCRLR---RIDQAYGLFIDMEEEGILPNKYTYTI 668
           A   F EM  +G++P V+TYN L++GLC+ R   RI +A  LF  M E+G +P+  TY+ 
Sbjct: 417 AMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSA 476

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL--LKQLDK 711
           LI+    AG   +A RL   M  +   P+  T+++L+  L  LDK
Sbjct: 477 LIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDK 521



 Score =  292 bits (747), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 177/532 (33%), Positives = 282/532 (53%), Gaps = 8/532 (1%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +LL    K   +E+      ++L  GL  D+   N  I  L        A+ V+  M + 
Sbjct: 21  ILLRSLLKSGKIEKAHRFVEQLLVKGLC-DISTFNIYISGLCRASRIGDAQTVFDGMRKH 79

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G  P+ +TYN +L   C  G M +A  L   M   G SP+ VTYN L+ GF + G+L++A
Sbjct: 80  GFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEA 139

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             +    +K G      +YN +I G+ +   L EA  + + MV+  + P + TYN L+ G
Sbjct: 140 LKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNG 199

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS-GNIGEAFLLFDELRSRNLVP 416
           LCK GRV +AR    +   K   P++I+Y+TL+ G CR    +  A  L +++      P
Sbjct: 200 LCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKP 256

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
            +V+YN LI GL R   +  A +L  +++ QG  P+V TY I+++G  K   ++ A E F
Sbjct: 257 DIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELF 316

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           + +++ GL+PD   YT  I G  K G   +A  + ++M  KG  PD++++N +++GLCK 
Sbjct: 317 SGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKE 376

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
             ++EA  LL  M   G  P+ I++ ++I      G  ++    F  ML++G+ PT+VTY
Sbjct: 377 KRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTY 436

Query: 597 TVLIHA---HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
            +L+         GR++ A   F  M  KG  P+V+TY+ALI+GL +  ++D A  L   
Sbjct: 437 NILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGA 496

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           ME +G +PN YTY  LI+  C      EAL L+  M+++   PD  T+  ++
Sbjct: 497 MEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTII 548



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/363 (33%), Positives = 193/363 (53%), Gaps = 5/363 (1%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
           +E    +  KM+ NG  PD+ + N +I  L R+ G S +A +++  +   G +P + TYN
Sbjct: 239 LESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVS-EALKLFGSVLRQGYEPEVPTYN 297

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
            ++D   KE  + EA EL   +   G  P+ +TY V I G  + G +E A  +++DM + 
Sbjct: 298 ILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEK 357

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           G      S+N +I G  ++  + EA  L   M  +G +P   ++N LI G C+ G+   A
Sbjct: 358 GCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKA 417

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRS---GNIGEAFLLFDELRSRNLVPTVVTYNTL 424
              F EML++ V P +++YN L+ G C++   G I EA  LFD +  +  VP VVTY+ L
Sbjct: 418 MTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSAL 477

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           IDGL + G L+ A++L   M  +G +P+V TY  +++G C +  +  A E F  M+ KG 
Sbjct: 478 IDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGC 537

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            PD   Y T I+   K     +A  L +  L  G  P    Y  L+ GLC +  ++EA +
Sbjct: 538 VPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALK 597

Query: 545 LLR 547
           LL+
Sbjct: 598 LLQ 600



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/310 (33%), Positives = 164/310 (52%), Gaps = 5/310 (1%)

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P   T   L+  L + G +E A +  E ++ +G L D+ T+ I ++G C+   +  A+  
Sbjct: 14  PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKG-LCDISTFNIYISGLCRASRIGDAQTV 72

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
           F+ M + G  P+R  Y   ++G    G  S+A  L E M+  G+ PD++TYN L+HG CK
Sbjct: 73  FDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCK 132

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
           +G L+EA ++    V  GF+PD +TY ++I+   +   L   + +   M+ + L P +VT
Sbjct: 133 VGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVT 192

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR-LRRIDQAYGLFIDM 654
           Y  L++     GR++ A M   +   KG  PNVITY+ LI+GLCR LRR++ A  L   M
Sbjct: 193 YNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRRLESARQLLEKM 249

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYK 714
              G  P+  +Y  LI+         EAL+L+  +L +  EP+  T++ L+   L +D  
Sbjct: 250 VLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRV 309

Query: 715 VHAVEYLESL 724
             A E    L
Sbjct: 310 NEAFELFSGL 319



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 76/151 (50%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           ++  +++ + +F+ M+  G +PDV   + +I  L   G    AR +   M   G  P++ 
Sbjct: 448 QEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVY 507

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TYN+++   C   ++ EALEL   M  +GC P+ +TY  +I+   +   +++A  L    
Sbjct: 508 TYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGS 567

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           L+ G+  ++  Y  +I G      + EAL L
Sbjct: 568 LEAGVVPTSGMYFSLIDGLCAVARVDEALKL 598


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 182/582 (31%), Positives = 283/582 (48%), Gaps = 45/582 (7%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL--RDNGFSVK-AR 228
           S  +LD  +  Y +         +F KM R  L P++  CN ++  L    +  SV  +R
Sbjct: 134 SKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSR 193

Query: 229 EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
           E +    + GI P++ T+N ++  +C E + ++A+E L  M    CSP+ VTYN ++   
Sbjct: 194 EAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTL 253

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
            + G L  AR L+ DM   GL  + ++YN ++ GY + G L EA N+ E M    + P +
Sbjct: 254 CKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDV 313

Query: 349 ATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDE 408
            TYN+LI GLC  GR+ +A     EM    ++PD++SYNTL+ G      I EAF L +E
Sbjct: 314 WTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEE 373

Query: 409 LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
           +  + + P  VT+N ++   C+ G ++ A      M   G  PD +TY  ++NG CK GN
Sbjct: 374 MSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGN 433

Query: 469 LSMAREFFNEMLRKGLQP-----------------------------------DRFAYTT 493
           +  A    +EM RK ++                                    D  +Y T
Sbjct: 434 MGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGT 493

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            I G  K G+   A +L +EM  K   P  +TYN ++ GLC+ G  E+A   L +++  G
Sbjct: 494 LIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESG 553

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
            +PD  TY +I+H     GD+ +     N M+     P + T  +L+      G LE A 
Sbjct: 554 LLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKAL 613

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
             F+    KG   + +TYN LI  LC+  R+D A+ L  +MEE+ + P+ YTY  +I   
Sbjct: 614 KLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITAL 673

Query: 674 CNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKV 715
            ++G  +EA     +ML++   PD        + QLDK+  V
Sbjct: 674 TDSGRIREAEEFMSKMLEKGNLPDQ-------VLQLDKNETV 708



 Score =  288 bits (737), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 184/570 (32%), Positives = 278/570 (48%), Gaps = 60/570 (10%)

Query: 195 VFNKMLRNGLLPDVKNCNRII-KVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
            FN  ++ G++P+V   N +I     +N F   A E   +MG++   P  VTYNT+LD+ 
Sbjct: 195 AFNDAIKLGIVPNVNTFNIVIYGYCLENKFK-DAVEFLNVMGKYNCSPDNVTYNTILDTL 253

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR----------- 302
           CK+G + +A +LL +M+ RG  PN  TYN+L+ G+ + G L++A  +I            
Sbjct: 254 CKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDV 313

Query: 303 ------------------------DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
                                   +M  L L     SYN +I G  E   + EA  L EE
Sbjct: 314 WTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEE 373

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
           M  +GV P   T+NI++   CK G++ DA +   +M      PD ++YNTL+ GYC++GN
Sbjct: 374 MSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGN 433

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           +GEAF   DE+  +N+    VT NT++  LCR   LE A +L  +   +G   D ++Y  
Sbjct: 434 MGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGT 493

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           ++ G  K GN+  A + ++EM  K + P    Y   I G  + G T +A     E+L  G
Sbjct: 494 LIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESG 553

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
             PD  TYN ++HG C+ G +E+A +   KMV + F PD  T   ++      G L +  
Sbjct: 554 LLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKAL 613

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
            LFN  + KG +   VTY  LI +    GRL+ AF   SEM+ K + P+  TYNA+I  L
Sbjct: 614 KLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITAL 673

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNK-----------------------YTYTILINENCN 675
               RI +A      M E+G LP++                         Y+  I E C 
Sbjct: 674 TDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCT 733

Query: 676 AGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            G +++A+R++ E   + I  D  T+  L+
Sbjct: 734 EGKYKDAMRIFGESKQKGITVDKSTYINLM 763



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 139/468 (29%), Positives = 245/468 (52%), Gaps = 3/468 (0%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR---NGELEQA 297
           PS    +T + ++ + G+   A ++  +M+     PN +T N L+    R   +  +  +
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
           R    D +KLG+  + +++N +I GY  +    +A+     M     +P   TYN ++  
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDT 252

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           LCK GR+ DAR    +M  + ++P+  +YN L+YGYC+ G + EA  + + +   NL+P 
Sbjct: 253 LCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPD 312

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           V TYN LI+GLC  G +E A +L++ M N  +LPDV++Y  ++NG  +   +S A +   
Sbjct: 313 VWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLE 372

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           EM  KG++P+   +   +    K G   +A     +M   GF PD +TYN L++G CK G
Sbjct: 373 EMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAG 432

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
           ++ EA   + +M       D +T  +I+        L     L ++  ++G     V+Y 
Sbjct: 433 NMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYG 492

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
            LI  +   G ++ A   + EM+ K I P+ +TYN +I GLC+  + +QA     ++ E 
Sbjct: 493 TLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLES 552

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           G+LP++ TY  +++  C  G+ ++A + + +M++   +PD  T + LL
Sbjct: 553 GLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILL 600



 Score =  245 bits (625), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 146/490 (29%), Positives = 245/490 (50%), Gaps = 23/490 (4%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           ++L+  Y K   +++   V   M +N LLPDV   N +I  L + G   +A ++   M  
Sbjct: 282 NILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMEN 341

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
             + P +V+YNT+++   +  ++ EA +LL EM  +G  PN VT+N+++  + + G+++ 
Sbjct: 342 LKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDD 401

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A   I  M + G      +YN +I GY + G + EA    +EM  + +     T N ++ 
Sbjct: 402 ASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILR 461

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
            LC+  ++ +A        ++    D +SY TL+ GY + GN+  A  L+DE++ + ++P
Sbjct: 462 TLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIP 521

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
           + VTYN +I GLC+ G  E A      ++  G+LPD  TY  +++G C+ G++  A +F 
Sbjct: 522 STVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFH 581

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           N+M+    +PD F     + G    G   +A +L    ++KG   D +TYN L+  LCK 
Sbjct: 582 NKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKE 641

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP----- 591
           G L++A  LL +M      PDH TY +II A  + G +R   +  + ML KG  P     
Sbjct: 642 GRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQ 701

Query: 592 ------------------TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
                             + V Y+  I      G+ + A   F E + KGI  +  TY  
Sbjct: 702 LDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYIN 761

Query: 634 LINGLCRLRR 643
           L++GL + R+
Sbjct: 762 LMDGLIKRRK 771



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 178/360 (49%), Gaps = 8/360 (2%)

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
            +D RH     + +   P     +T +  Y +SG    AF +F +++   L P ++T NT
Sbjct: 116 ATDRRHDLHLSILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNT 175

Query: 424 LIDGLCRYG---DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           L++ L RY     +  +++   + I  GI+P+V T+ I++ G C       A EF N M 
Sbjct: 176 LLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMG 235

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           +    PD   Y T +    K G   +A  L  +M ++G  P+  TYN+LV+G CK+G L+
Sbjct: 236 KYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLK 295

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA  ++  M  +  +PD  TY  +I+     G +     L + M    L P +V+Y  LI
Sbjct: 296 EAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLI 355

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
           +      ++  AF    EM  KG++PN +T+N ++   C+  ++D A      MEE G  
Sbjct: 356 NGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFS 415

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL-----KQLDKDYKV 715
           P+  TY  LIN  C AGN  EA R   EM  + ++ D  T + +L      K+L++ YK+
Sbjct: 416 PDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKL 475



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 117/244 (47%), Gaps = 3/244 (1%)

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE--- 541
            P +    T I   ++ G    A+++ ++M      P+L+T N L++ L +  S      
Sbjct: 132 SPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSF 191

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           + E     +  G +P+  T+  +I+        +   +  N M +   SP  VTY  ++ 
Sbjct: 192 SREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILD 251

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
               +GRL  A     +M+ +G+ PN  TYN L+ G C++  + +A  +   M +  +LP
Sbjct: 252 TLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLP 311

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYL 721
           + +TY +LIN  CN G  +EA +L  EM + ++ PD  +++ L+   L+      A + L
Sbjct: 312 DVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLL 371

Query: 722 ESLT 725
           E ++
Sbjct: 372 EEMS 375


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 189/629 (30%), Positives = 309/629 (49%), Gaps = 43/629 (6%)

Query: 105 RIALRFFRWVETQPGVKRDEFV--FCTILEILIESGLLRSAYWVVETVVCVNMHGILDVL 162
           ++AL+F +WV  QPG++ D  V   C    IL+ + +   A  +++ +    M G    +
Sbjct: 51  KLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSL--MSGKSSFV 108

Query: 163 IGGGLSS---CVS-IKILDLLLLIYTKKSMVEQCLLVF---------------------- 196
            G  +++   C S   + D+L+ +Y ++ M++  L +F                      
Sbjct: 109 FGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSV 168

Query: 197 -------------NKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
                         +ML+  + PDV   N +I VL   G   K+  + + M + G  P+I
Sbjct: 169 VKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTI 228

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           VTYNT+L  +CK+G  + A+ELL  M+ +G   +  TYN+LI    R+  + +   L+RD
Sbjct: 229 VTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRD 288

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M K  +  +  +YN +I G+S +G ++ A  L  EM++ G++P   T+N LI G    G 
Sbjct: 289 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 348

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
             +A   F+ M  K + P  +SY  LL G C++     A   +  ++   +    +TY  
Sbjct: 349 FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTG 408

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           +IDGLC+ G L+ A  L   M   GI PD++TY+ ++NG CK+G    A+E    + R G
Sbjct: 409 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 468

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           L P+   Y+T I    ++G   EA R+ E M+ +G   D  T+NVLV  LCK G + EA 
Sbjct: 469 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 528

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
           E +R M  DG +P+ +++  +I+     G+  +   +F+ M + G  PT  TY  L+   
Sbjct: 529 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 588

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
              G L  A  +   +       + + YN L+  +C+   + +A  LF +M +  ILP+ 
Sbjct: 589 CKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 648

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDR 692
           YTYT LI+  C  G    A+   KE   R
Sbjct: 649 YTYTSLISGLCRKGKTVIAILFAKEAEAR 677



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 154/560 (27%), Positives = 260/560 (46%), Gaps = 42/560 (7%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   +++ +++ N+M ++G+ PD+   + +I      G    A+E+   +   G+ P+ +
Sbjct: 415 KNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 474

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
            Y+T++ + C+ G ++EA+ +   M   G + +  T+NVL+T   + G++ +A   +R M
Sbjct: 475 IYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCM 534

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
              G+  +  S++ +I GY   G  ++A ++ +EM   G  PT  TY  L+ GLCK G +
Sbjct: 535 TSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHL 594

Query: 365 SDARHRFFEMLRKNVIP---DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
            +A  +F + L  + +P   D + YNTLL   C+SGN+ +A  LF E+  R+++P   TY
Sbjct: 595 REA-EKFLKSL--HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 651

Query: 422 NTLIDGLCRYGDLEVAQQL-KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
            +LI GLCR G   +A    KE      +LP+ + YT  V+G  K G       F  +M 
Sbjct: 652 TSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMD 711

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
             G  PD       I G  ++G   +   L  EM  +   P+L TYN+L+HG  K   + 
Sbjct: 712 NLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVS 771

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
            +  L R ++ +G +PD +T  S++    E   L  G  +    + +G+     T+ +LI
Sbjct: 772 TSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLI 831

Query: 601 HAHAARGRLELAF-----------------------------------MYFSEMQVKGIR 625
               A G +  AF                                   M   EM  +GI 
Sbjct: 832 SKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGIS 891

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           P    Y  LINGLCR+  I  A+ +  +M    I P     + ++      G   EA  L
Sbjct: 892 PESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLL 951

Query: 686 YKEMLDREIEPDYCTHSALL 705
            + ML  ++ P   + + L+
Sbjct: 952 LRFMLKMKLVPTIASFTTLM 971



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 138/508 (27%), Positives = 243/508 (47%), Gaps = 36/508 (7%)

Query: 199  MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
            M  +G+LP+  + + +I    ++G  +KA  V+  M + G  P+  TY ++L   CK G 
Sbjct: 534  MTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGH 593

Query: 259  MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
            ++EA + L  +     + + V YN L+T   ++G L +A  L  +M++  +   +++Y  
Sbjct: 594  LREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTS 653

Query: 319  IICGYSEKGLLVEALNLEEEMVTRG-VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            +I G   KG  V A+   +E   RG V P    Y   + G+ K G+     +   +M   
Sbjct: 654  LISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNL 713

Query: 378  NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
               PDI++ N ++ GY R G I +   L  E+ ++N  P + TYN L+ G  +  D+  +
Sbjct: 714  GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTS 773

Query: 438  QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA- 496
              L  ++I  GILPD +T   +V G C+   L +  +     + +G++ DR+ +   I+ 
Sbjct: 774  FLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISK 833

Query: 497  ----GEL-----------KLG-----DTSEA--------YRLQE------EMLAKGFPPD 522
                GE+            LG     DT +A        +R QE      EM  +G  P+
Sbjct: 834  CCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPE 893

Query: 523  LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
               Y  L++GLC++G ++ A  +  +M+     P ++  ++++ A  + G       L  
Sbjct: 894  SRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLR 953

Query: 583  NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
             ML+  L PT+ ++T L+H     G +  A      M   G++ ++++YN LI GLC   
Sbjct: 954  FMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKG 1013

Query: 643  RIDQAYGLFIDMEEEGILPNKYTYTILI 670
             +  A+ L+ +M+ +G L N  TY  LI
Sbjct: 1014 DMALAFELYEEMKGDGFLANATTYKALI 1041



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 202/410 (49%)

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           Y+ +I  Y  +G++ ++L +   M   G  P++ T N ++  + K G          EML
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 185

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
           ++ + PD+ ++N L+   C  G+  ++  L  ++      PT+VTYNT++   C+ G  +
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 245

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            A +L ++M ++G+  DV TY ++++  C+   ++       +M ++ + P+   Y T I
Sbjct: 246 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 305

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
            G    G    A +L  EML+ G  P+ +T+N L+ G    G+ +EA ++   M   G  
Sbjct: 306 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 365

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           P  ++Y  ++    +  +    R  +  M R G+    +TYT +I      G L+ A + 
Sbjct: 366 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVL 425

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
            +EM   GI P+++TY+ALING C++ R   A  +   +   G+ PN   Y+ LI   C 
Sbjct: 426 LNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCR 485

Query: 676 AGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
            G  +EA+R+Y+ M+      D+ T + L+           A E++  +T
Sbjct: 486 MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 535



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 136/547 (24%), Positives = 249/547 (45%), Gaps = 3/547 (0%)

Query: 181  LIYT--KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
            LIY   +   +++ + ++  M+  G   D    N ++  L   G   +A E  R M   G
Sbjct: 479  LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 538

Query: 239  IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
            I P+ V+++ +++ +   GE  +A  +  EM   G  P   TY  L+ G  + G L +A 
Sbjct: 539  ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 598

Query: 299  GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
              ++ +  +   V    YN ++    + G L +A++L  EMV R + P   TY  LI GL
Sbjct: 599  KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 658

Query: 359  CKWGRVSDARHRFFEM-LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
            C+ G+   A     E   R NV+P+ + Y   + G  ++G         +++ +    P 
Sbjct: 659  CRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPD 718

Query: 418  VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
            +VT N +IDG  R G +E    L   M NQ   P++ TY I+++G  K  ++S +   + 
Sbjct: 719  IVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYR 778

Query: 478  EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
             ++  G+ PD+    + + G  +        ++ +  + +G   D  T+N+L+   C  G
Sbjct: 779  SIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANG 838

Query: 538  SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
             +  A +L++ M   G   D  T  +++         +  R + + M ++G+SP    Y 
Sbjct: 839  EINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYI 898

Query: 598  VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
             LI+     G ++ AF+   EM    I P  +  +A++  L +  + D+A  L   M + 
Sbjct: 899  GLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKM 958

Query: 658  GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHA 717
             ++P   ++T L++  C  GN  EAL L   M +  ++ D  +++ L+     K     A
Sbjct: 959  KLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALA 1018

Query: 718  VEYLESL 724
             E  E +
Sbjct: 1019 FELYEEM 1025



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 151/556 (27%), Positives = 241/556 (43%), Gaps = 50/556 (8%)

Query: 119  GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
            G  RD F F  ++  L ++G +  A    E + C+   GIL   +             D 
Sbjct: 503  GHTRDHFTFNVLVTSLCKAGKVAEAE---EFMRCMTSDGILPNTVS-----------FDC 548

Query: 179  LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
            L+  Y       +   VF++M + G  P       ++K L   G   +A +  + +    
Sbjct: 549  LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 608

Query: 239  IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL---- 294
                 V YNT+L + CK G + +A+ L  EM  R   P+  TY  LI+G  R G+     
Sbjct: 609  AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 668

Query: 295  -----EQARG-----------LIRDMLK----------------LGLKVSAHSYNPIICG 322
                  +ARG            +  M K                LG      + N +I G
Sbjct: 669  LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG 728

Query: 323  YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
            YS  G + +  +L  EM  +   P L TYNIL++G  K   VS +   +  ++   ++PD
Sbjct: 729  YSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPD 788

Query: 383  IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
             ++ ++L+ G C S  +     +      R +     T+N LI   C  G++  A  L +
Sbjct: 789  KLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVK 848

Query: 443  NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
             M + GI  D  T   MV+   +      +R   +EM ++G+ P+   Y   I G  ++G
Sbjct: 849  VMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVG 908

Query: 503  DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
            D   A+ ++EEM+A    P  +  + +V  L K G  +EA  LLR M+    +P   ++T
Sbjct: 909  DIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFT 968

Query: 563  SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
            +++H   + G++    +L   M   GL   LV+Y VLI    A+G + LAF  + EM+  
Sbjct: 969  TLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGD 1028

Query: 623  GIRPNVITYNALINGL 638
            G   N  TY ALI GL
Sbjct: 1029 GFLANATTYKALIRGL 1044



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 174/357 (48%)

Query: 349 ATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDE 408
           + Y+ILI    + G + D+   F  M      P + + N +L    +SG     +    E
Sbjct: 124 SVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKE 183

Query: 409 LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
           +  R + P V T+N LI+ LC  G  E +  L + M   G  P ++TY  +++  CK G 
Sbjct: 184 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 243

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
              A E  + M  KG+  D   Y   I    +    ++ Y L  +M  +   P+ +TYN 
Sbjct: 244 FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 303

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           L++G    G +  A++LL +M+  G  P+H+T+ ++I   +  G+ +    +F  M  KG
Sbjct: 304 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 363

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
           L+P+ V+Y VL+         +LA  ++  M+  G+    ITY  +I+GLC+   +D+A 
Sbjct: 364 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 423

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            L  +M ++GI P+  TY+ LIN  C  G ++ A  +   +    + P+   +S L+
Sbjct: 424 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 480



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 178/364 (48%), Gaps = 7/364 (1%)

Query: 234  MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
            M   G  P IVT N M+D + + G++++  +LL EM  +   PN  TYN+L+ G+S+  +
Sbjct: 710  MDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKD 769

Query: 294  LEQARGLIRDMLKLGL---KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
            +  +  L R ++  G+   K++ HS   ++ G  E  +L   L + +  + RGV     T
Sbjct: 770  VSTSFLLYRSIILNGILPDKLTCHS---LVLGICESNMLEIGLKILKAFICRGVEVDRYT 826

Query: 351  YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
            +N+LI   C  G ++ A      M    +  D  + + ++    R+    E+ ++  E+ 
Sbjct: 827  FNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMS 886

Query: 411  SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
             + + P    Y  LI+GLCR GD++ A  +KE MI   I P  +  + MV    K G   
Sbjct: 887  KQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKAD 946

Query: 471  MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
             A      ML+  L P   ++TT +    K G+  EA  L+  M   G   DL++YNVL+
Sbjct: 947  EATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLI 1006

Query: 531  HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD-LFNNMLRKGL 589
             GLC  G +  A EL  +M GDGF+ +  TY ++I   L       G D +  ++L +G 
Sbjct: 1007 TGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGF 1066

Query: 590  SPTL 593
              ++
Sbjct: 1067 ITSM 1070



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 122/499 (24%), Positives = 217/499 (43%), Gaps = 18/499 (3%)

Query: 116  TQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKI 175
            T+ G     F + ++L+ L + G LR A   +++     +H +          + V   +
Sbjct: 570  TKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS-----LHAV---------PAAVDTVM 615

Query: 176  LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
             + LL    K   + + + +F +M++  +LPD      +I  L   G +V A    +   
Sbjct: 616  YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAE 675

Query: 236  EFG-IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
              G + P+ V Y   +D   K G+ +  +    +M   G +P+ VT N +I G+SR G++
Sbjct: 676  ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 735

Query: 295  EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
            E+   L+ +M       +  +YN ++ GYS++  +  +  L   ++  G+ P   T + L
Sbjct: 736  EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 795

Query: 355  IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
            + G+C+   +          + + V  D  ++N L+   C +G I  AF L   + S  +
Sbjct: 796  VLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 855

Query: 415  VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
                 T + ++  L R    + ++ +   M  QGI P+   Y  ++NG C++G++  A  
Sbjct: 856  SLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFV 915

Query: 475  FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
               EM+   + P   A +  +    K G   EA  L   ML     P + ++  L+H  C
Sbjct: 916  VKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCC 975

Query: 535  KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
            K G++ EA EL   M   G   D ++Y  +I      GD+    +L+  M   G      
Sbjct: 976  KNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANAT 1035

Query: 595  TYTVLIHAHAARGRLELAF 613
            TY  LI    AR   E AF
Sbjct: 1036 TYKALIRGLLAR---ETAF 1051



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 177/371 (47%), Gaps = 2/371 (0%)

Query: 203  GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
            G  PD+   N +I      G   K  ++   MG     P++ TYN +L  + K  ++  +
Sbjct: 714  GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTS 773

Query: 263  LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
              L   +   G  P+ +T + L+ G   +  LE    +++  +  G++V  +++N +I  
Sbjct: 774  FLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISK 833

Query: 323  YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
                G +  A +L + M + G++    T + ++  L +  R  ++R    EM ++ + P+
Sbjct: 834  CCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPE 893

Query: 383  IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
               Y  L+ G CR G+I  AF++ +E+ +  + P  V  + ++  L + G  + A  L  
Sbjct: 894  SRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLR 953

Query: 443  NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
             M+   ++P + ++T +++  CK GN+  A E    M   GL+ D  +Y   I G    G
Sbjct: 954  FMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKG 1013

Query: 503  DTSEAYRLQEEMLAKGFPPDLITYNVLVHG-LCKLGSLEEANELLRKMVGDGFIPDHITY 561
            D + A+ L EEM   GF  +  TY  L+ G L +  +   A+ +L+ ++  GFI   ++ 
Sbjct: 1014 DMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFITS-MSL 1072

Query: 562  TSIIHASLEMG 572
            +   H +L+M 
Sbjct: 1073 SQDSHRNLKMA 1083


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  303 bits (776), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 154/439 (35%), Positives = 252/439 (57%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
            E  + + + M+  GL P +   N ++K L  +G   KA EV++ M +FG+ P + ++  
Sbjct: 207 AEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTI 266

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++  FC+ GE++EAL++  EM+ RG  P+ V+++ LI  F+R G+++ A   +R+M   G
Sbjct: 267 LIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFG 326

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           L      Y  +I G+   GL+ +AL + +EMV  G  P + TYN L+ GLCK  R+ DA 
Sbjct: 327 LVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAE 386

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               EM  + V PD+ ++ TL++GYC  G + +A  LFD + ++ L P +VTYNTLIDG+
Sbjct: 387 GLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGM 446

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           CR GDL+ A  L ++M ++ I P+ +TY+I+++  C+ G +  A  F +EM+ KG+ P+ 
Sbjct: 447 CRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNI 506

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             Y + I G  + G+ S+  +  ++M+     PDLITYN L+HG  K   + +A +LL  
Sbjct: 507 MTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNM 566

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M  +   PD +TY  +I+     G+++    +F  M  KG+ P   TY  +I+ H   G 
Sbjct: 567 MEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGN 626

Query: 609 LELAFMYFSEMQVKGIRPN 627
            + AF    EM  +G  P+
Sbjct: 627 SKEAFQLHDEMLQRGFAPD 645



 Score =  298 bits (762), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 175/567 (30%), Positives = 287/567 (50%), Gaps = 35/567 (6%)

Query: 166 GLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSV 225
           G S     ++ DLL+  YT+     +    F  +L + +       N ++  L   G+  
Sbjct: 79  GSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPH 138

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
            A + YR++     + +  T N M+ ++CK  E  +   ++ EM+ R   P+ VT+NV++
Sbjct: 139 LAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMV 198

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
               R G+ E A  L+  M+  GLK    +YN ++ G    G+  +A  + +EM   GVA
Sbjct: 199 DARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVA 258

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P + ++ ILI G C+ G + +A   + EM  + + PD++S++ L+  + R G +  A   
Sbjct: 259 PDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAY 318

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
             E+R   LVP  V Y  +I G CR G +  A ++++ M+  G LPDV+TY  ++NG CK
Sbjct: 319 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 378

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
              L  A    NEM  +G+ PD   +TT I G    G   +A +L + ML +   PD++T
Sbjct: 379 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 438

Query: 526 YNVLVHGLCKLGSLEEANEL-----------------------------------LRKMV 550
           YN L+ G+C+ G L++AN+L                                   L +M+
Sbjct: 439 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 498

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
             G +P+ +TY SII      G++ +G+     M+   +SP L+TY  LIH +    ++ 
Sbjct: 499 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 558

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
            AF   + M+ + ++P+V+TYN LING      + +A  +F  M  +GI P++YTY  +I
Sbjct: 559 DAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMI 618

Query: 671 NENCNAGNWQEALRLYKEMLDREIEPD 697
           N +  AGN +EA +L+ EML R   PD
Sbjct: 619 NGHVTAGNSKEAFQLHDEMLQRGFAPD 645



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 130/407 (31%), Positives = 223/407 (54%), Gaps = 1/407 (0%)

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
           +V+ ++ N ++  Y +     +   +  EM  R V P + T+N+++    + G    A  
Sbjct: 153 EVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMA 212

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
               M+ K + P I++YN++L G CRSG   +A+ +F E+    + P V ++  LI G C
Sbjct: 213 LVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFC 272

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
           R G++E A ++ + M ++GI PD+++++ ++    + G +  A  +  EM   GL PD  
Sbjct: 273 RVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGV 332

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
            YT  I G  + G  S+A R+++EM+  G  PD++TYN L++GLCK   L +A  LL +M
Sbjct: 333 IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEM 392

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRL 609
              G  PD  T+T++IH     G L +   LF+ ML + L P +VTY  LI     +G L
Sbjct: 393 RERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDL 452

Query: 610 ELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL 669
           + A   + +M  + I PN +TY+ LI+  C   +++ A+G   +M  +GILPN  TY  +
Sbjct: 453 DKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSI 512

Query: 670 INENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVH 716
           I   C +GN  +  +  ++M+  ++ PD  T++ L+   + +D K+H
Sbjct: 513 IKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKED-KMH 558



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 84/145 (57%)

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
           + + M ++ + P +VT+ V++ A    G  E A      M  KG++P ++TYN+++ GLC
Sbjct: 178 VISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLC 237

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
           R    D+A+ +F +M++ G+ P+  ++TILI   C  G  +EAL++YKEM  R I+PD  
Sbjct: 238 RSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLV 297

Query: 700 THSALLLKQLDKDYKVHAVEYLESL 724
           + S L+     +    HA+ YL  +
Sbjct: 298 SFSCLIGLFARRGKMDHAMAYLREM 322


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  303 bits (776), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 188/625 (30%), Positives = 308/625 (49%), Gaps = 43/625 (6%)

Query: 105 RIALRFFRWVETQPGVKRDEFV--FCTILEILIESGLLRSAYWVVETVVCVNMHGILDVL 162
           ++AL+F +WV  QPG++ D  V   C    IL+ + +   A  +++ +    M G    +
Sbjct: 91  KLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSL--MSGKSSFV 148

Query: 163 IGGGLSS---CVS-IKILDLLLLIYTKKSMVEQCLLVF---------------------- 196
            G  +++   C S   + D+L+ +Y ++ M++  L +F                      
Sbjct: 149 FGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSV 208

Query: 197 -------------NKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
                         +ML+  + PDV   N +I VL   G   K+  + + M + G  P+I
Sbjct: 209 VKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTI 268

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           VTYNT+L  +CK+G  + A+ELL  M+ +G   +  TYN+LI    R+  + +   L+RD
Sbjct: 269 VTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRD 328

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M K  +  +  +YN +I G+S +G ++ A  L  EM++ G++P   T+N LI G    G 
Sbjct: 329 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 388

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
             +A   F+ M  K + P  +SY  LL G C++     A   +  ++   +    +TY  
Sbjct: 389 FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTG 448

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           +IDGLC+ G L+ A  L   M   GI PD++TY+ ++NG CK+G    A+E    + R G
Sbjct: 449 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 508

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           L P+   Y+T I    ++G   EA R+ E M+ +G   D  T+NVLV  LCK G + EA 
Sbjct: 509 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 568

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
           E +R M  DG +P+ +++  +I+     G+  +   +F+ M + G  PT  TY  L+   
Sbjct: 569 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 628

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
              G L  A  +   +       + + YN L+  +C+   + +A  LF +M +  ILP+ 
Sbjct: 629 CKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 688

Query: 664 YTYTILINENCNAGNWQEALRLYKE 688
           YTYT LI+  C  G    A+   KE
Sbjct: 689 YTYTSLISGLCRKGKTVIAILFAKE 713



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 154/560 (27%), Positives = 260/560 (46%), Gaps = 42/560 (7%)

Query: 185  KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
            K   +++ +++ N+M ++G+ PD+   + +I      G    A+E+   +   G+ P+ +
Sbjct: 455  KNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 514

Query: 245  TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
             Y+T++ + C+ G ++EA+ +   M   G + +  T+NVL+T   + G++ +A   +R M
Sbjct: 515  IYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCM 574

Query: 305  LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
               G+  +  S++ +I GY   G  ++A ++ +EM   G  PT  TY  L+ GLCK G +
Sbjct: 575  TSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHL 634

Query: 365  SDARHRFFEMLRKNVIP---DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
             +A  +F + L  + +P   D + YNTLL   C+SGN+ +A  LF E+  R+++P   TY
Sbjct: 635  REAE-KFLKSL--HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 691

Query: 422  NTLIDGLCRYGDLEVAQQL-KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
             +LI GLCR G   +A    KE      +LP+ + YT  V+G  K G       F  +M 
Sbjct: 692  TSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMD 751

Query: 481  RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
              G  PD       I G  ++G   +   L  EM  +   P+L TYN+L+HG  K   + 
Sbjct: 752  NLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVS 811

Query: 541  EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
             +  L R ++ +G +PD +T  S++    E   L  G  +    + +G+     T+ +LI
Sbjct: 812  TSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLI 871

Query: 601  HAHAARGRLELAF-----------------------------------MYFSEMQVKGIR 625
                A G +  AF                                   M   EM  +GI 
Sbjct: 872  SKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGIS 931

Query: 626  PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
            P    Y  LINGLCR+  I  A+ +  +M    I P     + ++      G   EA  L
Sbjct: 932  PESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLL 991

Query: 686  YKEMLDREIEPDYCTHSALL 705
             + ML  ++ P   + + L+
Sbjct: 992  LRFMLKMKLVPTIASFTTLM 1011



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 138/508 (27%), Positives = 243/508 (47%), Gaps = 36/508 (7%)

Query: 199  MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
            M  +G+LP+  + + +I    ++G  +KA  V+  M + G  P+  TY ++L   CK G 
Sbjct: 574  MTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGH 633

Query: 259  MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
            ++EA + L  +     + + V YN L+T   ++G L +A  L  +M++  +   +++Y  
Sbjct: 634  LREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTS 693

Query: 319  IICGYSEKGLLVEALNLEEEMVTRG-VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            +I G   KG  V A+   +E   RG V P    Y   + G+ K G+     +   +M   
Sbjct: 694  LISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNL 753

Query: 378  NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
               PDI++ N ++ GY R G I +   L  E+ ++N  P + TYN L+ G  +  D+  +
Sbjct: 754  GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTS 813

Query: 438  QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA- 496
              L  ++I  GILPD +T   +V G C+   L +  +     + +G++ DR+ +   I+ 
Sbjct: 814  FLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISK 873

Query: 497  ----GEL-----------KLG-----DTSEA--------YRLQE------EMLAKGFPPD 522
                GE+            LG     DT +A        +R QE      EM  +G  P+
Sbjct: 874  CCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPE 933

Query: 523  LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
               Y  L++GLC++G ++ A  +  +M+     P ++  ++++ A  + G       L  
Sbjct: 934  SRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLR 993

Query: 583  NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
             ML+  L PT+ ++T L+H     G +  A      M   G++ ++++YN LI GLC   
Sbjct: 994  FMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKG 1053

Query: 643  RIDQAYGLFIDMEEEGILPNKYTYTILI 670
             +  A+ L+ +M+ +G L N  TY  LI
Sbjct: 1054 DMALAFELYEEMKGDGFLANATTYKALI 1081



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 202/410 (49%)

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           Y+ +I  Y  +G++ ++L +   M   G  P++ T N ++  + K G          EML
Sbjct: 166 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 225

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
           ++ + PD+ ++N L+   C  G+  ++  L  ++      PT+VTYNT++   C+ G  +
Sbjct: 226 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 285

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            A +L ++M ++G+  DV TY ++++  C+   ++       +M ++ + P+   Y T I
Sbjct: 286 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 345

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
            G    G    A +L  EML+ G  P+ +T+N L+ G    G+ +EA ++   M   G  
Sbjct: 346 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 405

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           P  ++Y  ++    +  +    R  +  M R G+    +TYT +I      G L+ A + 
Sbjct: 406 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVL 465

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
            +EM   GI P+++TY+ALING C++ R   A  +   +   G+ PN   Y+ LI   C 
Sbjct: 466 LNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCR 525

Query: 676 AGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
            G  +EA+R+Y+ M+      D+ T + L+           A E++  +T
Sbjct: 526 MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 575



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 136/547 (24%), Positives = 249/547 (45%), Gaps = 3/547 (0%)

Query: 181  LIYT--KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
            LIY   +   +++ + ++  M+  G   D    N ++  L   G   +A E  R M   G
Sbjct: 519  LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 578

Query: 239  IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
            I P+ V+++ +++ +   GE  +A  +  EM   G  P   TY  L+ G  + G L +A 
Sbjct: 579  ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 638

Query: 299  GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
              ++ +  +   V    YN ++    + G L +A++L  EMV R + P   TY  LI GL
Sbjct: 639  KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 698

Query: 359  CKWGRVSDARHRFFEM-LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
            C+ G+   A     E   R NV+P+ + Y   + G  ++G         +++ +    P 
Sbjct: 699  CRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPD 758

Query: 418  VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
            +VT N +IDG  R G +E    L   M NQ   P++ TY I+++G  K  ++S +   + 
Sbjct: 759  IVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYR 818

Query: 478  EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
             ++  G+ PD+    + + G  +        ++ +  + +G   D  T+N+L+   C  G
Sbjct: 819  SIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANG 878

Query: 538  SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
             +  A +L++ M   G   D  T  +++         +  R + + M ++G+SP    Y 
Sbjct: 879  EINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYI 938

Query: 598  VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
             LI+     G ++ AF+   EM    I P  +  +A++  L +  + D+A  L   M + 
Sbjct: 939  GLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKM 998

Query: 658  GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHA 717
             ++P   ++T L++  C  GN  EAL L   M +  ++ D  +++ L+     K     A
Sbjct: 999  KLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALA 1058

Query: 718  VEYLESL 724
             E  E +
Sbjct: 1059 FELYEEM 1065



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 151/556 (27%), Positives = 241/556 (43%), Gaps = 50/556 (8%)

Query: 119  GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
            G  RD F F  ++  L ++G +  A    E + C+   GIL   +             D 
Sbjct: 543  GHTRDHFTFNVLVTSLCKAGKVAEAE---EFMRCMTSDGILPNTVS-----------FDC 588

Query: 179  LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
            L+  Y       +   VF++M + G  P       ++K L   G   +A +  + +    
Sbjct: 589  LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 648

Query: 239  IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL---- 294
                 V YNT+L + CK G + +A+ L  EM  R   P+  TY  LI+G  R G+     
Sbjct: 649  AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 708

Query: 295  -----EQARG-----------LIRDMLK----------------LGLKVSAHSYNPIICG 322
                  +ARG            +  M K                LG      + N +I G
Sbjct: 709  LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG 768

Query: 323  YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
            YS  G + +  +L  EM  +   P L TYNIL++G  K   VS +   +  ++   ++PD
Sbjct: 769  YSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPD 828

Query: 383  IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
             ++ ++L+ G C S  +     +      R +     T+N LI   C  G++  A  L +
Sbjct: 829  KLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVK 888

Query: 443  NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
             M + GI  D  T   MV+   +      +R   +EM ++G+ P+   Y   I G  ++G
Sbjct: 889  VMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVG 948

Query: 503  DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
            D   A+ ++EEM+A    P  +  + +V  L K G  +EA  LLR M+    +P   ++T
Sbjct: 949  DIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFT 1008

Query: 563  SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
            +++H   + G++    +L   M   GL   LV+Y VLI    A+G + LAF  + EM+  
Sbjct: 1009 TLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGD 1068

Query: 623  GIRPNVITYNALINGL 638
            G   N  TY ALI GL
Sbjct: 1069 GFLANATTYKALIRGL 1084



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 174/357 (48%)

Query: 349 ATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDE 408
           + Y+ILI    + G + D+   F  M      P + + N +L    +SG     +    E
Sbjct: 164 SVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKE 223

Query: 409 LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
           +  R + P V T+N LI+ LC  G  E +  L + M   G  P ++TY  +++  CK G 
Sbjct: 224 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 283

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
              A E  + M  KG+  D   Y   I    +    ++ Y L  +M  +   P+ +TYN 
Sbjct: 284 FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 343

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           L++G    G +  A++LL +M+  G  P+H+T+ ++I   +  G+ +    +F  M  KG
Sbjct: 344 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 403

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
           L+P+ V+Y VL+         +LA  ++  M+  G+    ITY  +I+GLC+   +D+A 
Sbjct: 404 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 463

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            L  +M ++GI P+  TY+ LIN  C  G ++ A  +   +    + P+   +S L+
Sbjct: 464 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 520



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 178/364 (48%), Gaps = 7/364 (1%)

Query: 234  MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
            M   G  P IVT N M+D + + G++++  +LL EM  +   PN  TYN+L+ G+S+  +
Sbjct: 750  MDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKD 809

Query: 294  LEQARGLIRDMLKLGL---KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
            +  +  L R ++  G+   K++ HS   ++ G  E  +L   L + +  + RGV     T
Sbjct: 810  VSTSFLLYRSIILNGILPDKLTCHS---LVLGICESNMLEIGLKILKAFICRGVEVDRYT 866

Query: 351  YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
            +N+LI   C  G ++ A      M    +  D  + + ++    R+    E+ ++  E+ 
Sbjct: 867  FNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMS 926

Query: 411  SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
             + + P    Y  LI+GLCR GD++ A  +KE MI   I P  +  + MV    K G   
Sbjct: 927  KQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKAD 986

Query: 471  MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
             A      ML+  L P   ++TT +    K G+  EA  L+  M   G   DL++YNVL+
Sbjct: 987  EATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLI 1046

Query: 531  HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD-LFNNMLRKGL 589
             GLC  G +  A EL  +M GDGF+ +  TY ++I   L       G D +  ++L +G 
Sbjct: 1047 TGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGF 1106

Query: 590  SPTL 593
              ++
Sbjct: 1107 ITSM 1110



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 122/499 (24%), Positives = 217/499 (43%), Gaps = 18/499 (3%)

Query: 116  TQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKI 175
            T+ G     F + ++L+ L + G LR A   +++     +H +          + V   +
Sbjct: 610  TKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS-----LHAV---------PAAVDTVM 655

Query: 176  LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
             + LL    K   + + + +F +M++  +LPD      +I  L   G +V A    +   
Sbjct: 656  YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAE 715

Query: 236  EFG-IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
              G + P+ V Y   +D   K G+ +  +    +M   G +P+ VT N +I G+SR G++
Sbjct: 716  ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 775

Query: 295  EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
            E+   L+ +M       +  +YN ++ GYS++  +  +  L   ++  G+ P   T + L
Sbjct: 776  EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 835

Query: 355  IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
            + G+C+   +          + + V  D  ++N L+   C +G I  AF L   + S  +
Sbjct: 836  VLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 895

Query: 415  VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
                 T + ++  L R    + ++ +   M  QGI P+   Y  ++NG C++G++  A  
Sbjct: 896  SLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFV 955

Query: 475  FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
               EM+   + P   A +  +    K G   EA  L   ML     P + ++  L+H  C
Sbjct: 956  VKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCC 1015

Query: 535  KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
            K G++ EA EL   M   G   D ++Y  +I      GD+    +L+  M   G      
Sbjct: 1016 KNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANAT 1075

Query: 595  TYTVLIHAHAARGRLELAF 613
            TY  LI    AR   E AF
Sbjct: 1076 TYKALIRGLLAR---ETAF 1091



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 177/371 (47%), Gaps = 2/371 (0%)

Query: 203  GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
            G  PD+   N +I      G   K  ++   MG     P++ TYN +L  + K  ++  +
Sbjct: 754  GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTS 813

Query: 263  LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
              L   +   G  P+ +T + L+ G   +  LE    +++  +  G++V  +++N +I  
Sbjct: 814  FLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISK 873

Query: 323  YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
                G +  A +L + M + G++    T + ++  L +  R  ++R    EM ++ + P+
Sbjct: 874  CCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPE 933

Query: 383  IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
               Y  L+ G CR G+I  AF++ +E+ +  + P  V  + ++  L + G  + A  L  
Sbjct: 934  SRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLR 993

Query: 443  NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
             M+   ++P + ++T +++  CK GN+  A E    M   GL+ D  +Y   I G    G
Sbjct: 994  FMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKG 1053

Query: 503  DTSEAYRLQEEMLAKGFPPDLITYNVLVHG-LCKLGSLEEANELLRKMVGDGFIPDHITY 561
            D + A+ L EEM   GF  +  TY  L+ G L +  +   A+ +L+ ++  GFI   ++ 
Sbjct: 1054 DMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFITS-MSL 1112

Query: 562  TSIIHASLEMG 572
            +   H +L+M 
Sbjct: 1113 SQDSHRNLKMA 1123


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 188/625 (30%), Positives = 308/625 (49%), Gaps = 43/625 (6%)

Query: 105 RIALRFFRWVETQPGVKRDEFV--FCTILEILIESGLLRSAYWVVETVVCVNMHGILDVL 162
           ++AL+F +WV  QPG++ D  V   C    IL+ + +   A  +++ +    M G    +
Sbjct: 51  KLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSL--MSGKSSFV 108

Query: 163 IGGGLSS---CVS-IKILDLLLLIYTKKSMVEQCLLVF---------------------- 196
            G  +++   C S   + D+L+ +Y ++ M++  L +F                      
Sbjct: 109 FGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSV 168

Query: 197 -------------NKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
                         +ML+  + PDV   N +I VL   G   K+  + + M + G  P+I
Sbjct: 169 VKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTI 228

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           VTYNT+L  +CK+G  + A+ELL  M+ +G   +  TYN+LI    R+  + +   L+RD
Sbjct: 229 VTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRD 288

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M K  +  +  +YN +I G+S +G ++ A  L  EM++ G++P   T+N LI G    G 
Sbjct: 289 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 348

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
             +A   F+ M  K + P  +SY  LL G C++     A   +  ++   +    +TY  
Sbjct: 349 FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTG 408

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           +IDGLC+ G L+ A  L   M   GI PD++TY+ ++NG CK+G    A+E    + R G
Sbjct: 409 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 468

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           L P+   Y+T I    ++G   EA R+ E M+ +G   D  T+NVLV  LCK G + EA 
Sbjct: 469 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 528

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
           E +R M  DG +P+ +++  +I+     G+  +   +F+ M + G  PT  TY  L+   
Sbjct: 529 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 588

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
              G L  A  +   +       + + YN L+  +C+   + +A  LF +M +  ILP+ 
Sbjct: 589 CKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 648

Query: 664 YTYTILINENCNAGNWQEALRLYKE 688
           YTYT LI+  C  G    A+   KE
Sbjct: 649 YTYTSLISGLCRKGKTVIAILFAKE 673



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 154/560 (27%), Positives = 260/560 (46%), Gaps = 42/560 (7%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   +++ +++ N+M ++G+ PD+   + +I      G    A+E+   +   G+ P+ +
Sbjct: 415 KNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 474

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
            Y+T++ + C+ G ++EA+ +   M   G + +  T+NVL+T   + G++ +A   +R M
Sbjct: 475 IYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCM 534

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
              G+  +  S++ +I GY   G  ++A ++ +EM   G  PT  TY  L+ GLCK G +
Sbjct: 535 TSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHL 594

Query: 365 SDARHRFFEMLRKNVIP---DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
            +A  +F + L  + +P   D + YNTLL   C+SGN+ +A  LF E+  R+++P   TY
Sbjct: 595 REA-EKFLKSL--HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 651

Query: 422 NTLIDGLCRYGDLEVAQQL-KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
            +LI GLCR G   +A    KE      +LP+ + YT  V+G  K G       F  +M 
Sbjct: 652 TSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMD 711

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
             G  PD       I G  ++G   +   L  EM  +   P+L TYN+L+HG  K   + 
Sbjct: 712 NLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVS 771

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
            +  L R ++ +G +PD +T  S++    E   L  G  +    + +G+     T+ +LI
Sbjct: 772 TSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLI 831

Query: 601 HAHAARGRLELAF-----------------------------------MYFSEMQVKGIR 625
               A G +  AF                                   M   EM  +GI 
Sbjct: 832 SKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGIS 891

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           P    Y  LINGLCR+  I  A+ +  +M    I P     + ++      G   EA  L
Sbjct: 892 PESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLL 951

Query: 686 YKEMLDREIEPDYCTHSALL 705
            + ML  ++ P   + + L+
Sbjct: 952 LRFMLKMKLVPTIASFTTLM 971



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 138/508 (27%), Positives = 243/508 (47%), Gaps = 36/508 (7%)

Query: 199  MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
            M  +G+LP+  + + +I    ++G  +KA  V+  M + G  P+  TY ++L   CK G 
Sbjct: 534  MTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGH 593

Query: 259  MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
            ++EA + L  +     + + V YN L+T   ++G L +A  L  +M++  +   +++Y  
Sbjct: 594  LREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTS 653

Query: 319  IICGYSEKGLLVEALNLEEEMVTRG-VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            +I G   KG  V A+   +E   RG V P    Y   + G+ K G+     +   +M   
Sbjct: 654  LISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNL 713

Query: 378  NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
               PDI++ N ++ GY R G I +   L  E+ ++N  P + TYN L+ G  +  D+  +
Sbjct: 714  GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTS 773

Query: 438  QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA- 496
              L  ++I  GILPD +T   +V G C+   L +  +     + +G++ DR+ +   I+ 
Sbjct: 774  FLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISK 833

Query: 497  ----GEL-----------KLG-----DTSEA--------YRLQE------EMLAKGFPPD 522
                GE+            LG     DT +A        +R QE      EM  +G  P+
Sbjct: 834  CCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPE 893

Query: 523  LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
               Y  L++GLC++G ++ A  +  +M+     P ++  ++++ A  + G       L  
Sbjct: 894  SRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLR 953

Query: 583  NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
             ML+  L PT+ ++T L+H     G +  A      M   G++ ++++YN LI GLC   
Sbjct: 954  FMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKG 1013

Query: 643  RIDQAYGLFIDMEEEGILPNKYTYTILI 670
             +  A+ L+ +M+ +G L N  TY  LI
Sbjct: 1014 DMALAFELYEEMKGDGFLANATTYKALI 1041



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 202/410 (49%)

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           Y+ +I  Y  +G++ ++L +   M   G  P++ T N ++  + K G          EML
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 185

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
           ++ + PD+ ++N L+   C  G+  ++  L  ++      PT+VTYNT++   C+ G  +
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 245

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            A +L ++M ++G+  DV TY ++++  C+   ++       +M ++ + P+   Y T I
Sbjct: 246 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 305

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
            G    G    A +L  EML+ G  P+ +T+N L+ G    G+ +EA ++   M   G  
Sbjct: 306 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 365

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           P  ++Y  ++    +  +    R  +  M R G+    +TYT +I      G L+ A + 
Sbjct: 366 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVL 425

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
            +EM   GI P+++TY+ALING C++ R   A  +   +   G+ PN   Y+ LI   C 
Sbjct: 426 LNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCR 485

Query: 676 AGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
            G  +EA+R+Y+ M+      D+ T + L+           A E++  +T
Sbjct: 486 MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 535



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 136/547 (24%), Positives = 249/547 (45%), Gaps = 3/547 (0%)

Query: 181  LIYT--KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
            LIY   +   +++ + ++  M+  G   D    N ++  L   G   +A E  R M   G
Sbjct: 479  LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 538

Query: 239  IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
            I P+ V+++ +++ +   GE  +A  +  EM   G  P   TY  L+ G  + G L +A 
Sbjct: 539  ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 598

Query: 299  GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
              ++ +  +   V    YN ++    + G L +A++L  EMV R + P   TY  LI GL
Sbjct: 599  KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 658

Query: 359  CKWGRVSDARHRFFEM-LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
            C+ G+   A     E   R NV+P+ + Y   + G  ++G         +++ +    P 
Sbjct: 659  CRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPD 718

Query: 418  VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
            +VT N +IDG  R G +E    L   M NQ   P++ TY I+++G  K  ++S +   + 
Sbjct: 719  IVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYR 778

Query: 478  EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
             ++  G+ PD+    + + G  +        ++ +  + +G   D  T+N+L+   C  G
Sbjct: 779  SIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANG 838

Query: 538  SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
             +  A +L++ M   G   D  T  +++         +  R + + M ++G+SP    Y 
Sbjct: 839  EINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYI 898

Query: 598  VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
             LI+     G ++ AF+   EM    I P  +  +A++  L +  + D+A  L   M + 
Sbjct: 899  GLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKM 958

Query: 658  GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHA 717
             ++P   ++T L++  C  GN  EAL L   M +  ++ D  +++ L+     K     A
Sbjct: 959  KLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALA 1018

Query: 718  VEYLESL 724
             E  E +
Sbjct: 1019 FELYEEM 1025



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 151/556 (27%), Positives = 241/556 (43%), Gaps = 50/556 (8%)

Query: 119  GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
            G  RD F F  ++  L ++G +  A    E + C+   GIL   +             D 
Sbjct: 503  GHTRDHFTFNVLVTSLCKAGKVAEAE---EFMRCMTSDGILPNTVS-----------FDC 548

Query: 179  LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
            L+  Y       +   VF++M + G  P       ++K L   G   +A +  + +    
Sbjct: 549  LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 608

Query: 239  IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL---- 294
                 V YNT+L + CK G + +A+ L  EM  R   P+  TY  LI+G  R G+     
Sbjct: 609  AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 668

Query: 295  -----EQARG-----------LIRDMLK----------------LGLKVSAHSYNPIICG 322
                  +ARG            +  M K                LG      + N +I G
Sbjct: 669  LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG 728

Query: 323  YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
            YS  G + +  +L  EM  +   P L TYNIL++G  K   VS +   +  ++   ++PD
Sbjct: 729  YSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPD 788

Query: 383  IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
             ++ ++L+ G C S  +     +      R +     T+N LI   C  G++  A  L +
Sbjct: 789  KLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVK 848

Query: 443  NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
             M + GI  D  T   MV+   +      +R   +EM ++G+ P+   Y   I G  ++G
Sbjct: 849  VMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVG 908

Query: 503  DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
            D   A+ ++EEM+A    P  +  + +V  L K G  +EA  LLR M+    +P   ++T
Sbjct: 909  DIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFT 968

Query: 563  SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
            +++H   + G++    +L   M   GL   LV+Y VLI    A+G + LAF  + EM+  
Sbjct: 969  TLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGD 1028

Query: 623  GIRPNVITYNALINGL 638
            G   N  TY ALI GL
Sbjct: 1029 GFLANATTYKALIRGL 1044



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 174/357 (48%)

Query: 349 ATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDE 408
           + Y+ILI    + G + D+   F  M      P + + N +L    +SG     +    E
Sbjct: 124 SVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKE 183

Query: 409 LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
           +  R + P V T+N LI+ LC  G  E +  L + M   G  P ++TY  +++  CK G 
Sbjct: 184 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 243

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
              A E  + M  KG+  D   Y   I    +    ++ Y L  +M  +   P+ +TYN 
Sbjct: 244 FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 303

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           L++G    G +  A++LL +M+  G  P+H+T+ ++I   +  G+ +    +F  M  KG
Sbjct: 304 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 363

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
           L+P+ V+Y VL+         +LA  ++  M+  G+    ITY  +I+GLC+   +D+A 
Sbjct: 364 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 423

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            L  +M ++GI P+  TY+ LIN  C  G ++ A  +   +    + P+   +S L+
Sbjct: 424 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 480



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 178/364 (48%), Gaps = 7/364 (1%)

Query: 234  MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
            M   G  P IVT N M+D + + G++++  +LL EM  +   PN  TYN+L+ G+S+  +
Sbjct: 710  MDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKD 769

Query: 294  LEQARGLIRDMLKLGL---KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
            +  +  L R ++  G+   K++ HS   ++ G  E  +L   L + +  + RGV     T
Sbjct: 770  VSTSFLLYRSIILNGILPDKLTCHS---LVLGICESNMLEIGLKILKAFICRGVEVDRYT 826

Query: 351  YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
            +N+LI   C  G ++ A      M    +  D  + + ++    R+    E+ ++  E+ 
Sbjct: 827  FNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMS 886

Query: 411  SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
             + + P    Y  LI+GLCR GD++ A  +KE MI   I P  +  + MV    K G   
Sbjct: 887  KQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKAD 946

Query: 471  MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
             A      ML+  L P   ++TT +    K G+  EA  L+  M   G   DL++YNVL+
Sbjct: 947  EATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLI 1006

Query: 531  HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD-LFNNMLRKGL 589
             GLC  G +  A EL  +M GDGF+ +  TY ++I   L       G D +  ++L +G 
Sbjct: 1007 TGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGF 1066

Query: 590  SPTL 593
              ++
Sbjct: 1067 ITSM 1070



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 122/499 (24%), Positives = 217/499 (43%), Gaps = 18/499 (3%)

Query: 116  TQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKI 175
            T+ G     F + ++L+ L + G LR A   +++     +H +          + V   +
Sbjct: 570  TKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS-----LHAV---------PAAVDTVM 615

Query: 176  LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
             + LL    K   + + + +F +M++  +LPD      +I  L   G +V A    +   
Sbjct: 616  YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAE 675

Query: 236  EFG-IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
              G + P+ V Y   +D   K G+ +  +    +M   G +P+ VT N +I G+SR G++
Sbjct: 676  ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 735

Query: 295  EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
            E+   L+ +M       +  +YN ++ GYS++  +  +  L   ++  G+ P   T + L
Sbjct: 736  EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 795

Query: 355  IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
            + G+C+   +          + + V  D  ++N L+   C +G I  AF L   + S  +
Sbjct: 796  VLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 855

Query: 415  VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
                 T + ++  L R    + ++ +   M  QGI P+   Y  ++NG C++G++  A  
Sbjct: 856  SLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFV 915

Query: 475  FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
               EM+   + P   A +  +    K G   EA  L   ML     P + ++  L+H  C
Sbjct: 916  VKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCC 975

Query: 535  KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
            K G++ EA EL   M   G   D ++Y  +I      GD+    +L+  M   G      
Sbjct: 976  KNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANAT 1035

Query: 595  TYTVLIHAHAARGRLELAF 613
            TY  LI    AR   E AF
Sbjct: 1036 TYKALIRGLLAR---ETAF 1051



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 177/371 (47%), Gaps = 2/371 (0%)

Query: 203  GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
            G  PD+   N +I      G   K  ++   MG     P++ TYN +L  + K  ++  +
Sbjct: 714  GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTS 773

Query: 263  LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
              L   +   G  P+ +T + L+ G   +  LE    +++  +  G++V  +++N +I  
Sbjct: 774  FLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISK 833

Query: 323  YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
                G +  A +L + M + G++    T + ++  L +  R  ++R    EM ++ + P+
Sbjct: 834  CCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPE 893

Query: 383  IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
               Y  L+ G CR G+I  AF++ +E+ +  + P  V  + ++  L + G  + A  L  
Sbjct: 894  SRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLR 953

Query: 443  NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
             M+   ++P + ++T +++  CK GN+  A E    M   GL+ D  +Y   I G    G
Sbjct: 954  FMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKG 1013

Query: 503  DTSEAYRLQEEMLAKGFPPDLITYNVLVHG-LCKLGSLEEANELLRKMVGDGFIPDHITY 561
            D + A+ L EEM   GF  +  TY  L+ G L +  +   A+ +L+ ++  GFI   ++ 
Sbjct: 1014 DMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFITS-MSL 1072

Query: 562  TSIIHASLEMG 572
            +   H +L+M 
Sbjct: 1073 SQDSHRNLKMA 1083


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 174/547 (31%), Positives = 278/547 (50%), Gaps = 37/547 (6%)

Query: 184  TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
            +K  MV   L +   M+ +GL PDV   N ++  L      + A  V++   E G +P++
Sbjct: 484  SKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNV 543

Query: 244  VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
            VTY+T++D   K  +M EAL+LL +M   GC  N VTY+ ++ G  + G +E A  ++R 
Sbjct: 544  VTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQ 603

Query: 304  MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
            M   G    A +YN +I G+ ++  L EA+ L  EM+  G  P++ TY  L +GLC+ GR
Sbjct: 604  MRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGR 663

Query: 364  VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL-RSRNLVPTVVTYN 422
              +A      M  +   P+ I+Y++++ G C++G + EA   F+++ R   + P V+ Y+
Sbjct: 664  FDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYS 723

Query: 423  TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
             LIDGLC+ G ++ A +  E MI  G +PDV+T++I++NG C  G +    E F  M  +
Sbjct: 724  ALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAER 783

Query: 483  GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK------- 535
            G + D +AY   I      G+ S AY L EEM   G   + +T+ +++  LC        
Sbjct: 784  GCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEA 843

Query: 536  --------------------LGSL------EEANELLRKMVGDGFIPDHITYTSIIHASL 569
                                + SL      E+A ELLR MV DG  PD   Y +++    
Sbjct: 844  VSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLF 903

Query: 570  EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
            + G       L   M  +G SP L TYT++I   +   +L LA  YF EM  K ++P+ I
Sbjct: 904  KAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAI 963

Query: 630  TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
             Y++LI+  C+  ++D A+ L   +   GI P    Y+ +++  C      +AL + +EM
Sbjct: 964  VYSSLIDAFCKADKVDDAWKL---LRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREM 1020

Query: 690  LDREIEP 696
              +  EP
Sbjct: 1021 KSKNCEP 1027



 Score =  265 bits (678), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 194/625 (31%), Positives = 291/625 (46%), Gaps = 38/625 (6%)

Query: 103 KPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVL 162
           K  IAL   R   +Q G+    F F ++L  L ++  L  A  +++ + CV      + L
Sbjct: 261 KLDIALGLLRDKNSQAGM----FAFSSLLHGLCQAHRLEEAIQLLKAMPCVPNVVCFNSL 316

Query: 163 IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL-RDN 221
           + G                   +   V++   +F+ M  +G   DV   N ++K L +  
Sbjct: 317 MNG-----------------LCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLR 359

Query: 222 GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG-RGCSPNGVT 280
                 R V  M    G  P++VT++T++   C  G + +A E+   M    G SPN  T
Sbjct: 360 RIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFT 419

Query: 281 YNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV 340
           Y  L+ G  + G+  +       ML+   + S  S  PI   +S +   V+ L ++   V
Sbjct: 420 YAFLLEGLCKAGDSRRLEQCFEQMLEREWRSS--SSWPI---HSPE---VDFLMVQ---V 468

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
            R   PTL TYN L+ GL K G V DA      M+   + PD+I++N++L G C+   I 
Sbjct: 469 CR---PTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRIL 525

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           +A  +F     R   P VVTY+TLIDGL +   ++ A QL   M+  G   + +TY+ +V
Sbjct: 526 DAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVV 585

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
           +G  K+G +  A     +M   G  PD   Y T I G  K     EA  L  EML  GF 
Sbjct: 586 DGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFH 645

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           P ++TY  L HGLC+ G  +EA E+L  M   G  P+ ITY+SI+    + G +      
Sbjct: 646 PSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGY 705

Query: 581 FNNMLR-KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
           F  M R + ++P ++ Y+ LI      GR++ A+ +   M   G  P+V+T++ LINGLC
Sbjct: 706 FEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLC 765

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
              RID    LF  M E G   + Y Y  +IN  C  G +  A  L +EM    I  +  
Sbjct: 766 DAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTV 825

Query: 700 THSALLLKQLDKDYKVHAVEYLESL 724
           TH  ++      D    AV Y  S+
Sbjct: 826 THGIVIKALCGNDRIDEAVSYFHSI 850



 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 192/677 (28%), Positives = 307/677 (45%), Gaps = 106/677 (15%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G   +   F  I++ L + G + +A+ VV+ +V  +   + DV            +I  +
Sbjct: 101 GCPPELITFGLIIKGLCKEGEIEAAFRVVDEMV--DRGFVPDV------------EIHTV 146

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL    +   V++    F ++L  G  PD    N ++  L   G    A  V +++ E  
Sbjct: 147 LLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESF 206

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
             P++ T+   +D   K G +  A E    M   G SPN VTY+ LI G  + G+L+ A 
Sbjct: 207 SSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIAL 266

Query: 299 GLIRDM-----------LKLGLKVSAH-------------------SYNPIICGYSEKGL 328
           GL+RD            L  GL   AH                    +N ++ G  +   
Sbjct: 267 GLLRDKNSQAGMFAFSSLLHGL-CQAHRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQARR 325

Query: 329 LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN--VIPDIISY 386
           + EA  L + M   G +  + TYNIL+ GLCK  R+ +A +R  E++R+     P+++++
Sbjct: 326 VDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEA-YRHVELMRRTEGCSPNVVTF 384

Query: 387 NTLLYGYCRSGNIGEAFLLFD--------------------------------------- 407
           +TL+ G C +G + +A+ +++                                       
Sbjct: 385 STLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQML 444

Query: 408 --ELRSRNLVP----------------TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
             E RS +  P                T+VTYNTL+ GL + G +  A  L E MI  G+
Sbjct: 445 EREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGL 504

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
            PDVIT+  +++G CK   +  A   F   L +G +P+   Y+T I G  K+    EA +
Sbjct: 505 SPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQ 564

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           L  +M+  G   + +TY+ +V GL K+G +E+A  +LR+M   G +PD +TY ++I    
Sbjct: 565 LLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFF 624

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
           +   LR    L   ML  G  P++VTYT L H     GR + A      M  +G  PN I
Sbjct: 625 KRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAI 684

Query: 630 TYNALINGLCRLRRIDQAYGLFIDM-EEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
           TY+++++GLC+  R+ +A G F  M  +E + P+   Y+ LI+  C AG   EA    + 
Sbjct: 685 TYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLER 744

Query: 689 MLDREIEPDYCTHSALL 705
           M+     PD  T S L+
Sbjct: 745 MIRAGRIPDVVTFSILI 761



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 144/453 (31%), Positives = 238/453 (52%), Gaps = 8/453 (1%)

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +VTYN +++  CK G + +A     +    G  P  VTY+ +I G  R+ E+++   L+ 
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M   G   +A +YN ++     +G   EA +L E M   G  P L T+ ++I GLCK G
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            +  A     EM+ +  +PD+  +  LL+  C  G + EA+  F ++      P  VTYN
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           T++DGL + G LE A  + + +      P V T+TI V+G  K GNL+ A EFF+ M + 
Sbjct: 181 TMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQT 240

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G+ P+   Y   I G  K G    A  L  +   K     +  ++ L+HGLC+   LEEA
Sbjct: 241 GVSPNTVTYDALIDGLCKAGKLDIALGLLRD---KNSQAGMFAFSSLLHGLCQAHRLEEA 297

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            +LL+ M     +P+ + + S+++   +   +    +LF+ M   G S  ++TY +L+  
Sbjct: 298 IQLLKAM---PCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKG 354

Query: 603 HAARGRLELAFMYFSEM-QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM-EEEGIL 660
                R+  A+ +   M + +G  PNV+T++ LI GLC   R++QA+ ++  M   EGI 
Sbjct: 355 LCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGIS 414

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
           PN++TY  L+   C AG+ +   + +++ML+RE
Sbjct: 415 PNRFTYAFLLEGLCKAGDSRRLEQCFEQMLERE 447



 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 161/581 (27%), Positives = 265/581 (45%), Gaps = 87/581 (14%)

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
           N +I  L   G    A   +R   +FG +P++VTY+T++D  C++ E+ +  +LL EM G
Sbjct: 5   NVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAG 64

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
           RGC+PN VTYN L+      G  ++A  L+  M   G      ++  II G  ++G +  
Sbjct: 65  RGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEA 124

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
           A  + +EMV RG  P +  + +L++ LC+ GRV +A   F ++L     PD ++YNT++ 
Sbjct: 125 AFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVD 184

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
           G  ++G +  A ++   L      PTV T+   +DGL + G+L  A +  ++M   G+ P
Sbjct: 185 GLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSP 244

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEM---------------------LRKGLQ----- 485
           + +TY  +++G CK G L +A     +                      L + +Q     
Sbjct: 245 NTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAM 304

Query: 486 ---PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
              P+   + + + G  +     EA+ L + M   G   D+ITYN+L+ GLCKL  + EA
Sbjct: 305 PCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEA 364

Query: 543 N---ELLRKMVG----------------------------------DGFIPDHITYTSII 565
               EL+R+  G                                  +G  P+  TY  ++
Sbjct: 365 YRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLL 424

Query: 566 HASLEMGDLRRGRDLFNNMLRKG---------------------LSPTLVTYTVLIHAHA 604
               + GD RR    F  ML +                        PTLVTY  L+   +
Sbjct: 425 EGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLS 484

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
             G +  A      M   G+ P+VIT+N++++GLC+ +RI  A+ +F    E G  PN  
Sbjct: 485 KSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVV 544

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           TY+ LI+         EAL+L  +M++     +  T+S ++
Sbjct: 545 TYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVV 585



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 162/625 (25%), Positives = 284/625 (45%), Gaps = 90/625 (14%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V++   +  +M   G  P+    N ++  L   G + +A  +   M   G  P ++T+  
Sbjct: 52  VDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGL 111

Query: 249 MLDSFCKEGEMQEALELLWEMQGRG---------------C------------------- 274
           ++   CKEGE++ A  ++ EM  RG               C                   
Sbjct: 112 IIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIG 171

Query: 275 -SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
            +P+ VTYN ++ G  + G LE A  +++ + +     +  ++   + G S+ G L  A 
Sbjct: 172 FTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAY 231

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA-------------------------R 368
              + M   GV+P   TY+ LI GLCK G++  A                          
Sbjct: 232 EFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQA 291

Query: 369 HRFFEMLR----KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
           HR  E ++       +P+++ +N+L+ G C++  + EAF LFD ++       V+TYN L
Sbjct: 292 HRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNIL 351

Query: 425 IDGLCRYGDLEVAQQLKENM-INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR-K 482
           + GLC+   +  A +  E M   +G  P+V+T++ ++ G C  G ++ A E +  M+  +
Sbjct: 352 LKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVE 411

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML------AKGFP---------------P 521
           G+ P+RF Y   + G  K GD+    +  E+ML      +  +P               P
Sbjct: 412 GISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRP 471

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
            L+TYN LV GL K G + +A  LL  M+  G  PD IT+ S++    +   +    ++F
Sbjct: 472 TLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVF 531

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
              L +G  P +VTY+ LI   +   +++ A    ++M   G R N +TY+ +++GL ++
Sbjct: 532 KRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKV 591

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
            R++ A  +   M + G LP+  TY  LI+        +EA+ L +EML+    P   T+
Sbjct: 592 GRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTY 651

Query: 702 SAL---LLKQLDKDYKVHAVEYLES 723
           + L   L +    D  V  ++Y+ +
Sbjct: 652 TTLCHGLCRSGRFDEAVEILDYMAA 676



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 165/598 (27%), Positives = 267/598 (44%), Gaps = 90/598 (15%)

Query: 129  TILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSI--KILDLLLLIYTKK 186
            T++  L +SG++R A             G+L+ +I  GLS  V     +LD L     K+
Sbjct: 478  TLVTGLSKSGMVRDAL------------GLLEFMIESGLSPDVITFNSVLDGL----CKE 521

Query: 187  SMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTY 246
              +     VF + L  G  P+V   + +I  L       +A ++   M E G + + VTY
Sbjct: 522  QRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTY 581

Query: 247  NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
            +T++D   K G M++A+ +L +M+  GC P+ VTYN LI GF +   L +A GL+R+ML+
Sbjct: 582  STVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLE 641

Query: 307  LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
             G   S  +Y  +  G    G   EA+ + + M  RG AP   TY+ ++ GLCK GRV++
Sbjct: 642  AGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTE 701

Query: 367  ARHRFFEMLRKNVI-PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
            A   F +M R  V+ P +I+Y+ L+ G C++G I EA+   + +     +P VVT++ LI
Sbjct: 702  ALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILI 761

Query: 426  DGLCRYG-----------------------------------DLEVAQQLKENMINQGIL 450
            +GLC  G                                   +   A  L E M   GI 
Sbjct: 762  NGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIA 821

Query: 451  PDVITYTIMVNGSCKMGNLSMAREFFN-----------------------------EMLR 481
             + +T+ I++   C    +  A  +F+                             E+LR
Sbjct: 822  KNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLR 881

Query: 482  K----GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
                 G  PD   Y T + G  K G    A +L +EM ++G  PDL TY +++ GL K  
Sbjct: 882  AMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAK 941

Query: 538  SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
             L  A +   +M+     PD I Y+S+I A  +   +    D +  +   G+ PT+  Y+
Sbjct: 942  QLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVD---DAWKLLRSSGIEPTITMYS 998

Query: 598  VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
             ++ +       + A     EM+ K   P +  + +L        R+D+A  L  D++
Sbjct: 999  TMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 197/388 (50%), Gaps = 30/388 (7%)

Query: 348 LATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFD 407
           + TYN+LI GLCK GRV DA   F + ++    P +++Y+T++ G CR   + +   L +
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 408 ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG 467
           E+  R   P  VTYNTL++ L   G  + A  L E M   G  P++IT+ +++ G CK G
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
            +  A    +EM+ +G  PD   +T  +    +LG   EA+   +++L  GF PD +TYN
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
            +V GL K G LE A  +L+ +      P   T+T  +    + G+L    + F++M + 
Sbjct: 181 TMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQT 240

Query: 588 GLSPTLVTYTVLIHAHAARGRLELA-------------FMYFS-----------EMQVKG 623
           G+SP  VTY  LI      G+L++A             F + S           E  ++ 
Sbjct: 241 GVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQL 300

Query: 624 IR-----PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGN 678
           ++     PNV+ +N+L+NGLC+ RR+D+A+ LF  M+E G   +  TY IL+   C    
Sbjct: 301 LKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRR 360

Query: 679 WQEALRLYKEMLDRE-IEPDYCTHSALL 705
             EA R  + M   E   P+  T S L+
Sbjct: 361 IPEAYRHVELMRRTEGCSPNVVTFSTLI 388



 Score = 52.4 bits (124), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 47/98 (47%)

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYK 687
           ++TYN LINGLC+  R+  A+  F    + G  P   TY+ +I+  C      +  +L +
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 688 EMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
           EM  R   P+  T++ L+   L +     A   LE + 
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMA 98


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 183/604 (30%), Positives = 305/604 (50%), Gaps = 18/604 (2%)

Query: 90  PELL---VRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWV 146
           P LL   V  + + ++ P  AL  F  +  + G K     + +++E L   G   +   V
Sbjct: 3   PPLLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEV 62

Query: 147 -VETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLL 205
            V+    V  H +  V +G               +  Y +K  V++ + VF +M      
Sbjct: 63  LVDMRENVGNHMLEGVYVGA--------------MKNYGRKGKVQEAVNVFERMDFYDCE 108

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P V + N I+ VL D+G+  +A +VY  M + GI P + ++   + SFCK      AL L
Sbjct: 109 PTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRL 168

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           L  M  +GC  N V Y  ++ GF       +   L   ML  G+ +   ++N ++    +
Sbjct: 169 LNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCK 228

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
           KG + E   L ++++ RGV P L TYN+ I GLC+ G +  A      ++ +   PD+I+
Sbjct: 229 KGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVIT 288

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           YN L+YG C++    EA +   ++ +  L P   TYNTLI G C+ G +++A+++  + +
Sbjct: 289 YNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAV 348

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
             G +PD  TY  +++G C  G  + A   FNE L KG++P+   Y T I G    G   
Sbjct: 349 FNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMIL 408

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           EA +L  EM  KG  P++ T+N+LV+GLCK+G + +A+ L++ M+  G+ PD  T+  +I
Sbjct: 409 EAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
           H       +    ++ + ML  G+ P + TY  L++      + E     +  M  KG  
Sbjct: 469 HGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCA 528

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           PN+ T+N L+  LCR R++D+A GL  +M+ + + P+  T+  LI+  C  G+   A  L
Sbjct: 529 PNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTL 588

Query: 686 YKEM 689
           +++M
Sbjct: 589 FRKM 592



 Score =  265 bits (678), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 154/528 (29%), Positives = 266/528 (50%), Gaps = 12/528 (2%)

Query: 183 YTKKSMVEQCLL-----VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           Y K   +E+ L+     V N ML    +  +KN  R  KV        +A  V+  M  +
Sbjct: 53  YGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQ-------EAVNVFERMDFY 105

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
             +P++ +YN ++      G   +A ++   M+ RG +P+  ++ + +  F +      A
Sbjct: 106 DCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAA 165

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L+ +M   G +++  +Y  ++ G+ E+    E   L  +M+  GV+  L+T+N L+  
Sbjct: 166 LRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRV 225

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           LCK G V +      +++++ V+P++ +YN  + G C+ G +  A  +   L  +   P 
Sbjct: 226 LCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPD 285

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           V+TYN LI GLC+    + A+     M+N+G+ PD  TY  ++ G CK G + +A     
Sbjct: 286 VITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVG 345

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           + +  G  PD+F Y + I G    G+T+ A  L  E L KG  P++I YN L+ GL   G
Sbjct: 346 DAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQG 405

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            + EA +L  +M   G IP+  T+  +++   +MG +     L   M+ KG  P + T+ 
Sbjct: 406 MILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFN 465

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           +LIH ++ + ++E A      M   G+ P+V TYN+L+NGLC+  + +     +  M E+
Sbjct: 466 ILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEK 525

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           G  PN +T+ IL+   C      EAL L +EM ++ + PD  T   L+
Sbjct: 526 GCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLI 573



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 151/504 (29%), Positives = 262/504 (51%), Gaps = 1/504 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F KML +G+   +   N++++VL   G   +  ++   + + G+ P++ TYN  +   C
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLC 262

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           + GE+  A+ ++  +  +G  P+ +TYN LI G  +N + ++A   +  M+  GL+  ++
Sbjct: 263 QRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSY 322

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +YN +I GY + G++  A  +  + V  G  P   TY  LI GLC  G  + A   F E 
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEA 382

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           L K + P++I YNTL+ G    G I EA  L +E+  + L+P V T+N L++GLC+ G +
Sbjct: 383 LGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCV 442

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
             A  L + MI++G  PD+ T+ I+++G      +  A E  + ML  G+ PD + Y + 
Sbjct: 443 SDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSL 502

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           + G  K     +     + M+ KG  P+L T+N+L+  LC+   L+EA  LL +M     
Sbjct: 503 LNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSV 562

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK-GLSPTLVTYTVLIHAHAARGRLELAF 613
            PD +T+ ++I    + GDL     LF  M     +S +  TY ++IHA   +  + +A 
Sbjct: 563 NPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAE 622

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
             F EM  + + P+  TY  +++G C+   ++  Y   ++M E G +P+  T   +IN  
Sbjct: 623 KLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCL 682

Query: 674 CNAGNWQEALRLYKEMLDREIEPD 697
           C      EA  +   M+ + + P+
Sbjct: 683 CVEDRVYEAAGIIHRMVQKGLVPE 706



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 163/560 (29%), Positives = 267/560 (47%), Gaps = 16/560 (2%)

Query: 103 KPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVL 162
           +P  ALR    + +Q G + +   +CT++    E       Y             +   +
Sbjct: 161 RPHAALRLLNNMSSQ-GCEMNVVAYCTVVGGFYEENFKAEGYE------------LFGKM 207

Query: 163 IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG 222
           +  G+S C+S    + LL +  KK  V++C  + +K+++ G+LP++   N  I+ L   G
Sbjct: 208 LASGVSLCLST--FNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRG 265

Query: 223 FSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYN 282
               A  +   + E G KP ++TYN ++   CK  + QEA   L +M   G  P+  TYN
Sbjct: 266 ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN 325

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
            LI G+ + G ++ A  ++ D +  G      +Y  +I G   +G    AL L  E + +
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK 385

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           G+ P +  YN LI GL   G + +A     EM  K +IP++ ++N L+ G C+ G + +A
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
             L   + S+   P + T+N LI G      +E A ++ + M++ G+ PDV TY  ++NG
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNG 505

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            CK        E +  M+ KG  P+ F +   +    +     EA  L EEM  K   PD
Sbjct: 506 LCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPD 565

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI-TYTSIIHASLEMGDLRRGRDLF 581
            +T+  L+ G CK G L+ A  L RKM     +     TY  IIHA  E  ++     LF
Sbjct: 566 AVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLF 625

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
             M+ + L P   TY +++      G + L + +  EM   G  P++ T   +IN LC  
Sbjct: 626 QEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVE 685

Query: 642 RRIDQAYGLFIDMEEEGILP 661
            R+ +A G+   M ++G++P
Sbjct: 686 DRVYEAAGIIHRMVQKGLVP 705



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 77/314 (24%), Positives = 137/314 (43%), Gaps = 44/314 (14%)

Query: 152 CV-NMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKN 210
           CV +  G++ V+I  G      I   ++L+  Y+ +  +E  L + + ML NG+ PDV  
Sbjct: 441 CVSDADGLVKVMISKGYFP--DIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYT 498

Query: 211 CNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQ 270
            N ++  L          E Y+ M E G  P++ T+N +L+S C+  ++ EAL LL EM+
Sbjct: 499 YNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMK 558

Query: 271 GRGCSPNGVT------------------------------------YNVLITGFSRNGEL 294
            +  +P+ VT                                    YN++I  F+    +
Sbjct: 559 NKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNV 618

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
             A  L ++M+   L    ++Y  ++ G+ + G +        EM+  G  P+L T   +
Sbjct: 619 TMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRV 678

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           I  LC   RV +A      M++K ++P+ +  NT+         +    L+ ++L  ++ 
Sbjct: 679 INCLCVEDRVYEAAGIIHRMVQKGLVPEAV--NTIC--DVDKKEVAAPKLVLEDLLKKSC 734

Query: 415 VPTVVTYNTLIDGL 428
           + T   Y  L DGL
Sbjct: 735 I-TYYAYELLFDGL 747



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 79/176 (44%), Gaps = 5/176 (2%)

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV--TYTVLIHAH 603
           +RK VG  F     TY S+I      G      ++  +M R+ +   ++   Y   +  +
Sbjct: 30  MRKEVG--FKHTLSTYRSVIEKLGYYGKFEAMEEVLVDM-RENVGNHMLEGVYVGAMKNY 86

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
             +G+++ A   F  M      P V +YNA+++ L      DQA+ +++ M + GI P+ 
Sbjct: 87  GRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDV 146

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVE 719
           Y++TI +   C       ALRL   M  +  E +   +  ++    ++++K    E
Sbjct: 147 YSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYE 202


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  302 bits (774), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 176/563 (31%), Positives = 275/563 (48%), Gaps = 38/563 (6%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL--RDNGFSVK-AR 228
           S  +LD  +  Y +         +F KM R  L P++  CN ++  L    +  SV  +R
Sbjct: 134 SKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSR 193

Query: 229 EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
           E +    + GI P++ T+N ++  +C E + ++A+E L  M    CSP+ VTYN ++   
Sbjct: 194 EAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDAL 253

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
            + G L  AR L+ DM   GL  + ++YN ++ GY + G L EA N+ E M    + P +
Sbjct: 254 CKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDV 313

Query: 349 ATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDE 408
            TYN+LI GLC  GR+ +A     EM    ++PD++SYNTL+ G      I EAF L +E
Sbjct: 314 WTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEE 373

Query: 409 LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
           +  + + P  VT+N ++   C+ G ++ A      M   G  PD +TY  ++NG CK GN
Sbjct: 374 MSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGN 433

Query: 469 LSMAREFFNEMLRKGLQP-----------------------------------DRFAYTT 493
           +  A    +EM RK ++                                    D  +Y T
Sbjct: 434 MGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGT 493

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            I G  K G+   A +L +EM  K   P  +TYN ++ GLC+ G  E+A   L +++  G
Sbjct: 494 LIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESG 553

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
            +PD  TY +I+H     GD+ +     N M+     P + T  +L+      G LE A 
Sbjct: 554 LLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKAL 613

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
             F+    KG   + +TYN LI  LC+  R+D A+ L  +MEE+ + P+ YTY  +I   
Sbjct: 614 KLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITAL 673

Query: 674 CNAGNWQEALRLYKEMLDREIEP 696
            ++G  +EA     +ML++   P
Sbjct: 674 TDSGRIREAEEFMSKMLEKGXLP 696



 Score =  288 bits (736), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 184/570 (32%), Positives = 277/570 (48%), Gaps = 60/570 (10%)

Query: 195 VFNKMLRNGLLPDVKNCNRII-KVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
            FN  ++ G++P+V   N +I     +N F   A E   +MG++   P  VTYNT+LD+ 
Sbjct: 195 AFNDAIKLGIVPNVNTFNIVIYGYCLENKFK-DAVEFLNVMGKYNCSPDNVTYNTILDAL 253

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR----------- 302
           CK+G + +A +LL +M+ RG  PN  TYN+L+ G+ + G L++A  +I            
Sbjct: 254 CKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDV 313

Query: 303 ------------------------DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
                                   +M  L L     SYN +I G  E   + EA  L EE
Sbjct: 314 WTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEE 373

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
           M  +GV P   T+NI++   CK G++ DA +   +M      PD ++YNTL+ GYC++GN
Sbjct: 374 MSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGN 433

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           +GEAF   DE+  +N+    VT NT++  LCR   LE A +L  +   +G   D ++Y  
Sbjct: 434 MGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGT 493

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           ++ G  K GN+  A + ++EM  K + P    Y   I G  + G T +A     E+L  G
Sbjct: 494 LIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESG 553

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
             PD  TYN ++HG C+ G +E+A +   KMV + F PD  T   ++      G L +  
Sbjct: 554 LLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKAL 613

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
            LFN  + KG +   VTY  LI +    GRL+ AF   SEM+ K + P+  TYNA+I  L
Sbjct: 614 KLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITAL 673

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNK-----------------------YTYTILINENCN 675
               RI +A      M E+G LP +                         Y+  I E C 
Sbjct: 674 TDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCT 733

Query: 676 AGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            G +++A+R++ E   + I  D  T+  L+
Sbjct: 734 EGKYKDAMRIFGESKQKGITVDKSTYINLM 763



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 139/468 (29%), Positives = 245/468 (52%), Gaps = 3/468 (0%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR---NGELEQA 297
           PS    +T + ++ + G+   A ++  +M+     PN +T N L+    R   +  +  +
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
           R    D +KLG+  + +++N +I GY  +    +A+     M     +P   TYN ++  
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDA 252

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           LCK GR+ DAR    +M  + ++P+  +YN L+YGYC+ G + EA  + + +   NL+P 
Sbjct: 253 LCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPD 312

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           V TYN LI+GLC  G +E A +L++ M N  +LPDV++Y  ++NG  +   +S A +   
Sbjct: 313 VWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLE 372

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           EM  KG++P+   +   +    K G   +A     +M   GF PD +TYN L++G CK G
Sbjct: 373 EMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAG 432

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
           ++ EA   + +M       D +T  +I+        L     L ++  ++G     V+Y 
Sbjct: 433 NMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYG 492

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
            LI  +   G ++ A   + EM+ K I P+ +TYN +I GLC+  + +QA     ++ E 
Sbjct: 493 TLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLES 552

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           G+LP++ TY  +++  C  G+ ++A + + +M++   +PD  T + LL
Sbjct: 553 GLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILL 600



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 146/490 (29%), Positives = 244/490 (49%), Gaps = 23/490 (4%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           ++L+  Y K   +++   V   M +N LLPDV   N +I  L + G   +A ++   M  
Sbjct: 282 NILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMEN 341

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
             + P +V+YNT+++   +  ++ EA +LL EM  +G  PN VT+N+++  + + G+++ 
Sbjct: 342 LKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDD 401

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A   I  M + G      +YN +I GY + G + EA    +EM  + +     T N ++ 
Sbjct: 402 ASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILR 461

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
            LC+  ++ +A        ++    D +SY TL+ GY + GN+  A  L+DE++ + ++P
Sbjct: 462 TLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIP 521

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
           + VTYN +I GLC+ G  E A      ++  G+LPD  TY  +++G C+ G++  A +F 
Sbjct: 522 STVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFH 581

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           N+M+    +PD F     + G    G   +A +L    ++KG   D +TYN L+  LCK 
Sbjct: 582 NKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKE 641

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT---- 592
           G L++A  LL +M      PDH TY +II A  + G +R   +  + ML KG  P     
Sbjct: 642 GRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQ 701

Query: 593 -------------------LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
                               V Y+  I      G+ + A   F E + KGI  +  TY  
Sbjct: 702 LDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYIN 761

Query: 634 LINGLCRLRR 643
           L++GL + R+
Sbjct: 762 LMDGLIKRRK 771



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 178/360 (49%), Gaps = 8/360 (2%)

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
            +D RH     + +   P     +T +  Y +SG    AF +F +++   L P ++T NT
Sbjct: 116 ATDRRHDLHLSILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNT 175

Query: 424 LIDGLCRYG---DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           L++ L RY     +  +++   + I  GI+P+V T+ I++ G C       A EF N M 
Sbjct: 176 LLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMG 235

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           +    PD   Y T +    K G   +A  L  +M ++G  P+  TYN+LV+G CK+G L+
Sbjct: 236 KYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLK 295

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA  ++  M  +  +PD  TY  +I+     G +     L + M    L P +V+Y  LI
Sbjct: 296 EAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLI 355

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
           +      ++  AF    EM  KG++PN +T+N ++   C+  ++D A      MEE G  
Sbjct: 356 NGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFS 415

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL-----KQLDKDYKV 715
           P+  TY  LIN  C AGN  EA R   EM  + ++ D  T + +L      K+L++ YK+
Sbjct: 416 PDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKL 475



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 118/244 (48%), Gaps = 3/244 (1%)

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE--- 541
            P +    T I   ++ G    A+++ ++M      P+L+T N L++ L +  S      
Sbjct: 132 SPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSF 191

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           + E     +  G +P+  T+  +I+        +   +  N M +   SP  VTY  ++ 
Sbjct: 192 SREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILD 251

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
           A   +GRL  A     +M+ +G+ PN  TYN L+ G C++  + +A  +   M +  +LP
Sbjct: 252 ALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLP 311

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYL 721
           + +TY +LIN  CN G  +EA +L  EM + ++ PD  +++ L+   L+      A + L
Sbjct: 312 DVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLL 371

Query: 722 ESLT 725
           E ++
Sbjct: 372 EEMS 375


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  302 bits (773), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 164/500 (32%), Positives = 266/500 (53%), Gaps = 9/500 (1%)

Query: 198 KMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG 257
           +M R+G+ P +   N II  L  +       E++  + E G  P +VTYNT++DS CK G
Sbjct: 27  EMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAG 86

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH--S 315
           +++EA  L  +M  RGC PN VTY+VLI G  + G +++AR LI++M +    V  +  +
Sbjct: 87  DLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIIT 146

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRG--VAPTLATYNILIYGLCKWGRVSDARHRFFE 373
           YN  + G  ++ +  EA  L   +      V+P   T++ LI GLCK G++ +A   F +
Sbjct: 147 YNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDD 206

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M+    +P++I+YN L+ G C++  +  A  + + +  + + P V+TY+ L+D  C+   
Sbjct: 207 MIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASR 266

Query: 434 LEVAQQLKENMINQG-----ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           ++ A +L   M ++G     ++PD +T+ I++ G+CK GN   A   F EM+ K LQPD 
Sbjct: 267 VDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDV 326

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             +   I G  K G    A  + + M   G PP+++TYN LVHGLCK G +EEA + L +
Sbjct: 327 MTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEE 386

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           MV  G +PD ITY S+++A            L + +   G  P  VTY +L+      G+
Sbjct: 387 MVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGK 446

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
            E A     EM  KG +P+  T+ A  +GL R   +     L   +  +G+LP+  T + 
Sbjct: 447 TEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSS 506

Query: 669 LINENCNAGNWQEALRLYKE 688
           +++  C +G   +   + KE
Sbjct: 507 ILDWVCRSGKLDDVKAMIKE 526



 Score =  301 bits (772), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 169/509 (33%), Positives = 278/509 (54%), Gaps = 12/509 (2%)

Query: 208 VKNCNRIIKVLRDNGFSVKAREVYR-MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELL 266
           V + N +++ L   G + +A E++R  M   G+ P+IVTYNT+++  CK  ++   +EL 
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60

Query: 267 WEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEK 326
            E+  RG  P+ VTYN LI    + G+LE+AR L  DM   G   +  +Y+ +I G  + 
Sbjct: 61  EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120

Query: 327 GLLVEALNLEEEMVTRG--VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN---VIP 381
           G + EA  L +EM  +   V P + TYN  + GLCK    ++A       LR     V P
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEA-CELMRSLRDGSLRVSP 179

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           D ++++TL+ G C+ G I EA  +FD++ +   VP V+TYN L++GLC+   +E A  + 
Sbjct: 180 DTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMI 239

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG-----LQPDRFAYTTQIA 496
           E+M+++G+ PDVITY+++V+  CK   +  A E  + M  +G     L PD+  +   IA
Sbjct: 240 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIA 299

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
           G  K G+  +A  L EEM+AK   PD++T+  L+ GLCK G +E A ++L  M   G  P
Sbjct: 300 GACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPP 359

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
           + +TY +++H   + G +         M+  G  P  +TY  L++A     R + A    
Sbjct: 360 NVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLV 419

Query: 617 SEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNA 676
           SE++  G  P+ +TYN L++GL +  + +QA  +  +M  +G  P+ +T+    +    +
Sbjct: 420 SELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRS 479

Query: 677 GNWQEALRLYKEMLDREIEPDYCTHSALL 705
           GN    + L + +L + + PD  T S++L
Sbjct: 480 GNLAGTMELLRVVLAKGMLPDATTCSSIL 508



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 159/533 (29%), Positives = 269/533 (50%), Gaps = 24/533 (4%)

Query: 87  VSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWV 146
           V+D  ++++ L R  +  R AL  FR    + GV      + TI+  L +S  L +   +
Sbjct: 1   VADYNIVLQSLCRAGDTAR-ALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMEL 59

Query: 147 VETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLP 206
            E +V    H                +   + L+    K   +E+   +   M   G +P
Sbjct: 60  FEELVERGHH--------------PDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVP 105

Query: 207 DVKNCNRIIKVLRDNGFSVKAREVYRMMG--EFGIKPSIVTYNTMLDSFCKEGEMQEALE 264
           +V   + +I  L   G   +ARE+ + M      + P+I+TYN+ LD  CK+    EA E
Sbjct: 106 NVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACE 165

Query: 265 LLWEMQGRG--CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
           L+  ++      SP+ VT++ LI G  + G++++A  +  DM+  G   +  +YN ++ G
Sbjct: 166 LMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNG 225

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN---- 378
             +   +  A  + E MV +GV P + TY++L+   CK  RV +A      M  +     
Sbjct: 226 LCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPN 285

Query: 379 -VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
            ++PD +++N L+ G C++GN  +A  LF+E+ ++NL P V+T+  LIDGLC+ G +E A
Sbjct: 286 VLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAA 345

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
           + + + M N G+ P+V+TY  +V+G CK G +  A +F  EM+  G  PD   Y + +  
Sbjct: 346 RDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYA 405

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
             +   T +A +L  E+ + G+ PD +TYN+LV GL K G  E+A  +L +MVG G  PD
Sbjct: 406 LCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPD 465

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
             T+ +        G+L    +L   +L KG+ P   T + ++      G+L+
Sbjct: 466 SFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLD 518



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 113/235 (48%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
            ++L+    K    EQ   +F +M+   L PDV     +I  L   G    AR++  +MG
Sbjct: 294 FNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMG 353

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
             G+ P++VTYN ++   CK G ++EA + L EM   GC P+ +TY  L+    R    +
Sbjct: 354 NLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTD 413

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
            A  L+ ++   G      +YN ++ G  + G   +A+ + EEMV +G  P   T+    
Sbjct: 414 DALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACF 473

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
            GL + G ++        +L K ++PD  + +++L   CRSG + +   +  E  
Sbjct: 474 SGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEFE 528


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  302 bits (773), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 173/566 (30%), Positives = 289/566 (51%), Gaps = 16/566 (2%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
            ++L+  +   S +   L  F K+ + G  PDV   + ++  L       +A +++  M 
Sbjct: 115 FNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM- 173

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
               +P++VT+ T+++  C+EG + EA+ LL  M   G  PN +TY  ++ G  + G+  
Sbjct: 174 ---CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTV 230

Query: 296 QARGLIRDMLKLG-LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
            A  L+R M ++  +K +   Y+ II G  + G   +A NL  EM  +G+ P L TYN +
Sbjct: 231 SALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCM 290

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           I G C  GR S+A+    EML + + P++++Y+ L+  Y +     EA  L+DE+  R +
Sbjct: 291 IDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGI 350

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
           +P  +TYN++IDG C+   L+ A+ +   M  +G  PDV T+  +++G C    +    E
Sbjct: 351 IPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTE 410

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
             +EM   GL  D   Y T I G   +GD + A  L ++M++ G  PD++T N L+ GLC
Sbjct: 411 LLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLC 470

Query: 535 KLGSLEEANELLRKMVG-----------DGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
             G L++A E+ + M             +G  PD  TY  +I   +  G      +L+  
Sbjct: 471 DNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKE 530

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           M  +G+ P  +TY+ +I+    + RL+ A   F  M  K   P+V+T+N L++G C+  R
Sbjct: 531 MPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGR 590

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSA 703
           +D    LF +M   GI+ +  TY  LI+     GN   AL +++EM+   + PD  T  +
Sbjct: 591 VDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRS 650

Query: 704 LLLKQLDKDYKVHAVEYLESLTLGAE 729
           +L     K+    AV  LE L +  +
Sbjct: 651 MLTVLWSKEELKRAVAMLEDLQMSMD 676



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 171/564 (30%), Positives = 270/564 (47%), Gaps = 51/564 (9%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +E  + +F+ M+R+  LP V + N+++ V+           +Y+ M    I   + ++N 
Sbjct: 58  LEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNI 117

Query: 249 MLDSFCK-----------------------------------EGEMQEALELLWEMQGRG 273
           ++  FC                                    E  + EAL+L  +M    
Sbjct: 118 LIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM---- 173

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
           C PN VT+  L+ G  R G + +A  L+  M++ GL+ +  +Y  I+ G  + G  V AL
Sbjct: 174 CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSAL 233

Query: 334 NLEEEMVTRG-VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
           NL  +M     + P +  Y+ +I GL K GR SDA + + EM  K + PD+ +YN ++ G
Sbjct: 234 NLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDG 293

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
           +C SG   EA  L  E+  R + P VVTY+ LI+   +      A++L + M+ +GI+P+
Sbjct: 294 FCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPN 353

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
            ITY  M++G CK   L  A   F  M  KG  PD F + T I G        +   L  
Sbjct: 354 TITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLH 413

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           EM   G   D  TYN L+HG C +G L  A +L ++M+  G  PD +T  +++    + G
Sbjct: 414 EMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 473

Query: 573 DLRRGRDLFNNMLRK-----------GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
            L+   ++F  M +            G+ P + TY +LI      G+   A   + EM  
Sbjct: 474 KLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPH 533

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
           +GI PN ITY+++INGLC+  R+D+A  +F  M  +   P+  T+  L++  C AG   +
Sbjct: 534 RGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDD 593

Query: 682 ALRLYKEMLDREIEPDYCTHSALL 705
            L L+ EM  R I  D  T+  L+
Sbjct: 594 GLELFCEMGRRGIVADAITYITLI 617



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 139/448 (31%), Positives = 230/448 (51%), Gaps = 17/448 (3%)

Query: 284 LITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE------ALNLEE 337
           L +GF     LE A  L  DM++     S   +N ++      G++V        ++L +
Sbjct: 48  LRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLM------GVVVRMERPDLVISLYQ 101

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
           +M  + +   + ++NILI   C   ++  A   F ++ +    PD+++++TLL+G C   
Sbjct: 102 KMERKQIPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVED 161

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
            + EA  LF ++      P VVT+ TL++GLCR G +  A  L + M+  G+ P+ ITY 
Sbjct: 162 RVSEALDLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG 217

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKG-LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA 516
            +V+G CK+G+   A     +M     ++P+   Y+  I G  K G  S+A+ L  EM  
Sbjct: 218 TIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQE 277

Query: 517 KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
           KG  PDL TYN ++ G C  G   EA  LL++M+     P+ +TY+++I+A ++      
Sbjct: 278 KGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFE 337

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
             +L++ ML +G+ P  +TY  +I     + RL+ A   F  M  KG  P+V T+N LI+
Sbjct: 338 AEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLID 397

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
           G C  +RID    L  +M E G++ +  TY  LI+  C  G+   AL L ++M+   + P
Sbjct: 398 GYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCP 457

Query: 697 DYCTHSALLLKQLDKDYKVHAVEYLESL 724
           D  T + LL    D      A+E  +++
Sbjct: 458 DIVTCNTLLDGLCDNGKLKDALEMFKAM 485


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  302 bits (773), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 193/669 (28%), Positives = 335/669 (50%), Gaps = 48/669 (7%)

Query: 104 PRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILD--- 160
           P+ ALR+F+  ETQ G  R    +C +L IL+ S      +     ++   + G  D   
Sbjct: 114 PQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSP---ETHGHARKLLNRYVSGDSDPSP 170

Query: 161 VLIGGGLSSC-------VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNR 213
           V+    L +C       +  ++ + LL  Y + + +E  +  FN M+   ++P V   N 
Sbjct: 171 VVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNI 230

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
           ++  L       + R++Y  M   GI     T + M+ +  KEG ++EA E   E + RG
Sbjct: 231 LLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERG 290

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
              +   Y+++I    +         L+ +M + G   S  ++  +I     +G +VEAL
Sbjct: 291 VKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEAL 350

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
            L+EEM+  G    L     L+ G C  G +  A + F ++    + P+ ++Y+ L+ G 
Sbjct: 351 RLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGC 410

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTV----------------------------------V 419
           C SGNI +A  L+ +++   + P+V                                   
Sbjct: 411 CNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIF 470

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
           TYN ++  LC+ G ++ A  L +NM+NQG++P+V++Y  M+ G C+ GN+ MA   F++M
Sbjct: 471 TYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDM 530

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
           L + L+P+   Y+  I G  K GD+ +A  L ++ML+    P   T+N +++GLCK+G +
Sbjct: 531 LARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQM 590

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
            EA + L+  + +GFIP  +TY SI+   ++ G++     ++  M   G+SP +VTYT L
Sbjct: 591 SEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSL 650

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           I+      R++LA     EM+ KG+  +V  Y+ALI+G C+ R ++ A  LF ++ E G+
Sbjct: 651 INGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGL 710

Query: 660 LPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVE 719
            PN+  Y  +I+   +  N + AL  YK+M++  I  D  T++ L+   L +   V A +
Sbjct: 711 SPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASD 770

Query: 720 -YLESLTLG 727
            Y+E L+ G
Sbjct: 771 LYMEMLSKG 779



 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 170/547 (31%), Positives = 286/547 (52%), Gaps = 39/547 (7%)

Query: 130 ILEILIESGLLRS-AYWVVETVVCVNMHGILDVL-IGGGLSSC---VSIKILDLLLLIYT 184
           +LE + E G + S A +    V CV    +++ L +   + +C   +++ +   L+  Y 
Sbjct: 317 LLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYC 376

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS-- 242
            +  ++  L +FNK+  +GL P+    + +I+   ++G   KA E+Y  M   GI PS  
Sbjct: 377 AQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVF 436

Query: 243 --------------------------------IVTYNTMLDSFCKEGEMQEALELLWEMQ 270
                                           I TYN M+   CK G+M EA  LL  M 
Sbjct: 437 NVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMV 496

Query: 271 GRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLV 330
            +G  PN V+YN +I G  R G ++ A  +  DML   LK +  +Y+ +I G  +KG   
Sbjct: 497 NQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSE 556

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
           +AL+L ++M++  +APT  T+N +I GLCK G++S+AR +    L +  IP  ++YN+++
Sbjct: 557 KALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIV 616

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
            G+ + GNI  A  ++ E+    + P VVTY +LI+G C+   +++A + ++ M  +G+ 
Sbjct: 617 DGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLE 676

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
            DV  Y+ +++G CK  ++  A++ F E+L  GL P+R  Y + I+G   L +   A   
Sbjct: 677 LDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVW 736

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
            ++M+    P DL TY  L+ GL K G L  A++L  +M+  G +PD IT+  +++    
Sbjct: 737 YKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCN 796

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
            G L   R +   M RK ++P+++ Y  LI  +   G L+ AF    EM  +G+ P+ +T
Sbjct: 797 KGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVT 856

Query: 631 YNALING 637
           Y+ LING
Sbjct: 857 YDILING 863



 Score =  268 bits (685), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 168/563 (29%), Positives = 274/563 (48%), Gaps = 36/563 (6%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           KK      L +  +M   G +P       +I      G  V+A  +   M   G   ++V
Sbjct: 307 KKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLV 366

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
              +++  +C +G +  AL L  ++   G  PN VTY+VLI G   +G +E+A  L   M
Sbjct: 367 VATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQM 426

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
              G+  S  + N ++ GY +  L  EA  L +E V  GVA  + TYNI++  LCK G++
Sbjct: 427 KLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKM 485

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG------------------------ 400
            +A      M+ + ++P+++SYN ++ G+CR GN+                         
Sbjct: 486 DEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSIL 545

Query: 401 -----------EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
                      +A  LFD++ S N+ PT  T+NT+I+GLC+ G +  A+   +N + +G 
Sbjct: 546 IDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGF 605

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
           +P  +TY  +V+G  K GN+  A   + EM   G+ P+   YT+ I G  K      A +
Sbjct: 606 IPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALK 665

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
            ++EM  KG   D+  Y+ L+ G CK   +E A +L  +++  G  P+ I Y S+I    
Sbjct: 666 TRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFR 725

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
           ++ ++      +  M+   +   L TYT LI      GRL  A   + EM  KGI P++I
Sbjct: 726 DLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDII 785

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           T++ L+NGLC   +++ A  +  +M+ + + P+   Y  LI      GN +EA  L+ EM
Sbjct: 786 TFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEM 845

Query: 690 LDREIEPDYCTHSALLLKQLDKD 712
           LDR + PD  T+  L+  +   D
Sbjct: 846 LDRGLVPDDVTYDILINGKFKGD 868



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 125/410 (30%), Positives = 218/410 (53%), Gaps = 5/410 (1%)

Query: 123 DEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLI 182
           DE V C +  I   + ++    W+ +         +LD ++  G+    ++   + ++L 
Sbjct: 459 DEAVDCGVANIFTYNIMMS---WLCKGGKMDEACSLLDNMVNQGMVP--NVVSYNDMILG 513

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + +K  ++    VF+ ML   L P+V   + +I      G S KA +++  M    I P+
Sbjct: 514 HCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPT 573

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             T+NT+++  CK G+M EA + L      G  P+ +TYN ++ GF + G ++ A  + R
Sbjct: 574 DFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYR 633

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M + G+  +  +Y  +I G+ +   +  AL   +EM  +G+   +  Y+ LI G CK  
Sbjct: 634 EMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRR 693

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            +  A+  FFE+L   + P+ I YN+++ G+    N+  A + + ++ +  +   + TY 
Sbjct: 694 DMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYT 753

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           TLIDGL + G L  A  L   M+++GI+PD+IT+ ++VNG C  G L  AR+   EM RK
Sbjct: 754 TLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRK 813

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
            + P    Y T IAG  + G+  EA+ L +EML +G  PD +TY++L++G
Sbjct: 814 NMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 863



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 94/181 (51%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K+  +E    +F ++L  GL P+    N +I   RD      A   Y+ M    I   
Sbjct: 689 FCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCD 748

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           + TY T++D   KEG +  A +L  EM  +G  P+ +T++VL+ G    G+LE AR ++ 
Sbjct: 749 LGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILE 808

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M +  +  S   YN +I GY  +G L EA  L +EM+ RG+ P   TY+ILI G  K  
Sbjct: 809 EMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGD 868

Query: 363 R 363
           R
Sbjct: 869 R 869


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  301 bits (772), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 169/466 (36%), Positives = 266/466 (57%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P++VTYN++L++  K G+ +EA  L  E++    +P+ V+Y+ LI    R G+ E A  +
Sbjct: 7   PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           + +M   G K +  +YN ++    + G   EAL L  EM   G  P + TYN LI  L K
Sbjct: 67  VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            GR+S+A   F EM  +  +PD  +YN+L+YG  + G   +A  L +E+      P V+T
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y++LI GL + G+   A +L + M  +G  PD IT+T +++   K G +  A E  +EM 
Sbjct: 187 YSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMK 246

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            +G++P    Y   IAG  K+GD  EAY L +EM   G  PD++TY+ L+ GL K   L+
Sbjct: 247 ERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLD 306

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA ++L+KM  +G  PD ITY ++I+   + G L     LF+ M  KG +P +VTY+ LI
Sbjct: 307 EACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLI 366

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
            A     R+E A + F EM+  GI+P++ TY ++I  L +  ++D A  LF +M  +G+ 
Sbjct: 367 TALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLS 426

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
           P+  TY   +N     G ++EA +++++M +  + PD  T+ ALLL
Sbjct: 427 PDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLL 472



 Score =  300 bits (767), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 169/487 (34%), Positives = 263/487 (54%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P+V   N ++  L   G   +A+ ++  +      P +V+Y+ +++S  + G+ + ALE+
Sbjct: 7   PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           + EMQ +GC PN  TYN L+    + G+ ++A  L+ +M   G      +YN +I    +
Sbjct: 67  VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
            G L EA  L  EM  RG  P   TYN LIYGL K GR   A     EM R    PD+++
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           Y++L+ G  + G   +AF LF E++ R   P  +T+  L+D L + G ++ A +L + M 
Sbjct: 187 YSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMK 246

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
            +G+ P V+TY  ++ G  K+G+L  A    +EM R G +PD   Y+  I G +K     
Sbjct: 247 ERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLD 306

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           EA ++ ++M  +G PPD ITYN L++GL K G L +A  L  +M   G  PD +TY+++I
Sbjct: 307 EACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLI 366

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
            A  +   +     LF  M   G+ P L TY  +I      G+++ A   FSEM+ KG+ 
Sbjct: 367 TALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLS 426

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           P+VITYNA +N L R  R  +A  +F DM+E G+LP+  TY  L+          +A  L
Sbjct: 427 PDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGL 486

Query: 686 YKEMLDR 692
            KE++++
Sbjct: 487 LKELIEQ 493



 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 185/562 (32%), Positives = 276/562 (49%), Gaps = 35/562 (6%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL    K    E+  L+F ++      PDV + + +I  L   G    A EV   M   G
Sbjct: 15  LLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKG 74

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
            KP++ TYNT++D   K G+  EAL LL EM+  GC P+  TYN LI+   + G L +A 
Sbjct: 75  CKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAF 134

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L  +M + G      +YN +I G  + G   +A+ L EEM   G  P + TY+ LI GL
Sbjct: 135 TLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGL 194

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
            K G    A   F EM R+   PD I++  L+    ++G + +A  L DE++ R + P V
Sbjct: 195 GKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGV 254

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           VTYN LI G  + GDL  A  L + M   G  PDV+TY+ ++ G  K   L  A +   +
Sbjct: 255 VTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKK 314

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M ++G  PD   Y T I G  K G  ++A RL + M +KG  PD++TY+ L+  L K   
Sbjct: 315 MEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAAR 374

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           +E A  L  +M   G  PD  TY SII    + G +     LF+ M  KGLSP ++TY  
Sbjct: 375 VESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNA 434

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE- 657
            +++    GR + A   F +M+  G+ P+V TY+AL+ GL + + +D A GL  ++ E+ 
Sbjct: 435 FLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQG 494

Query: 658 ----------------------------------GILPNKYTYTILINENCNAGNWQEAL 683
                                             G+ P   +Y  LI+    AG   EA 
Sbjct: 495 CAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAF 554

Query: 684 RLYKEMLDREIEPDYCTHSALL 705
              +++ ++  +PD  ++S+L+
Sbjct: 555 NTLEDLKEQGGKPDIVSYSSLI 576



 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 163/526 (30%), Positives = 271/526 (51%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K    ++ L +  +M  NG +PDV+  N +I  L   G   +A  ++  M E G  P   
Sbjct: 91  KAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTF 150

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TYN+++    K G  Q+A+ELL EM+  GC P+ +TY+ LITG  ++GE  +A  L ++M
Sbjct: 151 TYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEM 210

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
            + G K  + ++  ++    + G + +AL L +EM  RGV P + TYN LI G  K G +
Sbjct: 211 KRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDL 270

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            +A +   EM R    PD+++Y+ L+ G  ++  + EA  +  ++      P  +TYNTL
Sbjct: 271 VEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTL 330

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           I+GL + G L  A +L + M ++G  PDV+TY+ ++    K   +  A   F EM   G+
Sbjct: 331 INGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGI 390

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
           QPD F Y + I    K G   +A RL  EM  KG  PD+ITYN  ++ L + G  +EA +
Sbjct: 391 QPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARK 450

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           +   M   G +PD  TY +++    +  ++     L   ++ +G +   + +   +    
Sbjct: 451 IFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILT 510

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
           + G ++ A         KG+ P   +YNALI+ L +  R+ +A+    D++E+G  P+  
Sbjct: 511 SWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIV 570

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLD 710
           +Y+ LI+     G    A  L +EM  R ++    ++S L+ K  D
Sbjct: 571 SYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKLQD 616



 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 165/534 (30%), Positives = 278/534 (52%), Gaps = 6/534 (1%)

Query: 145 WVVETVV-CVNMHGILD----VLIGGGLSSCV-SIKILDLLLLIYTKKSMVEQCLLVFNK 198
           W   T+V C+   G  D    +L     + CV  ++  + L+    K   + +   +F +
Sbjct: 80  WTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAE 139

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           M   G +PD    N +I  L   G S KA E+   M   G  P ++TY++++    K+GE
Sbjct: 140 MRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGE 199

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
             +A +L  EM+ RG  P+ +T+  L+    + G ++ A  L+ +M + G+K    +YN 
Sbjct: 200 TVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNA 259

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           +I G+ + G LVEA NL +EM   G  P + TY+ LI GL K  ++ +A     +M ++ 
Sbjct: 260 LIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEG 319

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
             PD I+YNTL+ G  ++G + +A  LFD ++S+   P VVTY+TLI  L +   +E A 
Sbjct: 320 CPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESAC 379

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
            L E M + GI PD+ TY  ++    K G +  A   F+EM  KGL PD   Y   +   
Sbjct: 380 VLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSL 439

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
            + G   EA ++ E+M   G  PD+ TY+ L+ GL K   +++A  LL++++  G   D 
Sbjct: 440 GRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDS 499

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
           + +   +      G++    +L      KGL P   +Y  LI A A  GR+  AF    +
Sbjct: 500 LKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLED 559

Query: 619 MQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
           ++ +G +P++++Y++LI+ L +  +ID A+ L  +M + G+  +  +Y+ L+ +
Sbjct: 560 LKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRK 613



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 189/388 (48%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   V+  L + ++M   G+ P V   N +I      G  V+A  +   M   G KP +V
Sbjct: 231 KAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVV 290

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY+ ++    K  ++ EA ++L +M+  GC P+ +TYN LI G  + G L  A  L   M
Sbjct: 291 TYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRM 350

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
              G      +Y+ +I    +   +  A  L EEM + G+ P L TY  +I  L K G+V
Sbjct: 351 KSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQV 410

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            DA   F EM  K + PD+I+YN  L    R G   EA  +F++++   L+P V TY+ L
Sbjct: 411 DDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDAL 470

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           + GL +  +++ A  L + +I QG   D + +   +      GN+  A E       KGL
Sbjct: 471 LLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGL 530

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            P   +Y   I    K G  SEA+   E++  +G  PD+++Y+ L+  L + G ++ A E
Sbjct: 531 WPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFE 590

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMG 572
           LL +M   G      +Y++++    + G
Sbjct: 591 LLEEMSKRGLKLSPRSYSNLVRKLQDWG 618



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 176/344 (51%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           + ++M RNG  PDV   + +I  L       +A +V + M + G  P  +TYNT+++   
Sbjct: 276 LLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLG 335

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K G + +A  L   M+ +GC+P+ VTY+ LIT   +   +E A  L  +M  +G++    
Sbjct: 336 KAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLF 395

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +Y  II    + G + +A  L  EM  +G++P + TYN  +  L + GR  +AR  F +M
Sbjct: 396 TYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDM 455

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
               ++PD+ +Y+ LL G  ++  + +A  L  EL  +      + ++  ++ L  +G++
Sbjct: 456 KESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNV 515

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A +L +   ++G+ P   +Y  +++   K G +S A     ++  +G +PD  +Y++ 
Sbjct: 516 DEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSL 575

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           I+   + G    A+ L EEM  +G      +Y+ LV  L   G+
Sbjct: 576 ISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKLQDWGA 619


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  301 bits (772), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 182/604 (30%), Positives = 304/604 (50%), Gaps = 18/604 (2%)

Query: 90  PELL---VRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWV 146
           P LL   V  + R ++ P  AL  F  +  + G K     + +I+E L   G   +   V
Sbjct: 3   PPLLPKHVTTVIRCQKDPMKALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEV 62

Query: 147 -VETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLL 205
            V+    V  H +  V +G               +  Y +K  V++ + VF +M      
Sbjct: 63  LVDMRQNVGNHMLEGVYVGA--------------MKNYGRKGKVQEAVNVFERMDFYDCE 108

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P V + N I+ +L D+G+  +A +VY  M + GI P + ++   + SFC+      AL L
Sbjct: 109 PTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRL 168

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           L  M  +GC  N V Y  ++ GF      ++   L   ML  G+ +   ++N ++    +
Sbjct: 169 LNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCK 228

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
           KG + E   L ++++ RGV P L TYN  I GLC+ G +  A      ++ +   PD+++
Sbjct: 229 KGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVT 288

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           YN L+YG C++    EA +   +L +  L P   TYNTLI G C+ G +++A+++  N +
Sbjct: 289 YNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAV 348

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
             G +PD  TY  +++G C  G  + A   FNE L KG++P+   Y T I G    G   
Sbjct: 349 FNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLIL 408

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           EA +L  EM  KG  P++ T+N+LV+GLCK+G + +A+ L++ M+  G+ PD  T+  +I
Sbjct: 409 EAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
           H       +    ++ + M+  G+ P + TY  L++      + E     +  M  KG  
Sbjct: 469 HGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCA 528

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           PN+ T+N L+  LCR  ++D+A GL  +M+ + + P+  T+  LI+  C  G+   A  L
Sbjct: 529 PNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTL 588

Query: 686 YKEM 689
           +++M
Sbjct: 589 FRKM 592



 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 155/531 (29%), Positives = 267/531 (50%), Gaps = 12/531 (2%)

Query: 180 LLIYTKKSMVEQCLL-----VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           L +Y K   +E+ L+     V N ML    +  +KN  R  KV        +A  V+  M
Sbjct: 50  LGLYGKFEAMEEVLVDMRQNVGNHMLEGVYVGAMKNYGRKGKVQ-------EAVNVFERM 102

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
             +  +P++ +YN ++      G   +A ++   M+ RG +P+  ++ + +  F R    
Sbjct: 103 DFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRP 162

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
             A  L+ +M   G +++  +Y  ++ G+ E+    E   L  +M+  GV+  L+T+N L
Sbjct: 163 HAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKL 222

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           ++ LCK G V +      +++++ V+P++ +YN  + G C+ G +  A  +   L  +  
Sbjct: 223 LHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGP 282

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P VVTYN LI GLC+    + A+     ++N+G+ PD  TY  ++ G CK G + +A  
Sbjct: 283 KPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAER 342

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
                +  G  PD F Y + I G    G+T+ A  L  E L KG  P++I YN L+ GL 
Sbjct: 343 ILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLS 402

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
             G + EA +L  +M   G IP+  T+  +++   +MG +     L   M+ KG  P + 
Sbjct: 403 NQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIF 462

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           T+ +LIH ++ + ++E A      M   G+ P+V TYN+L+NGLC+  + +     +  M
Sbjct: 463 TFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTM 522

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            E+G  PN +T+ IL+   C      +AL L +EM ++ + PD  T   L+
Sbjct: 523 VEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLI 573



 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 150/504 (29%), Positives = 259/504 (51%), Gaps = 1/504 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F KML +G+   +   N+++ VL   G   +  ++   + + G+ P++ TYN  +   C
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLC 262

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           ++GE+  A+ ++  +  +G  P+ VTYN LI G  +N + ++A   +  ++  GL+  + 
Sbjct: 263 QKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSF 322

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +YN +I GY + G++  A  +    V  G  P   TY  LI GLC  G  + A   F E 
Sbjct: 323 TYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEA 382

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           L K + P++I YNTL+ G    G I EA  L  E+  + L+P V T+N L++GLC+ G +
Sbjct: 383 LGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCV 442

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
             A  L + MI++G  PD+ T+ I+++G      +  A E  + M+  G+ PD + Y + 
Sbjct: 443 SDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSL 502

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           + G  K     +     + M+ KG  P+L T+N+L+  LC+   L++A  LL +M     
Sbjct: 503 LNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSV 562

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL-SPTLVTYTVLIHAHAARGRLELAF 613
            PD +T+ ++I    + GDL     LF  M    + S +  TY ++IHA   +  + +A 
Sbjct: 563 NPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAE 622

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
             F EM  + + P+  TY  +++G C+   +D  Y   ++M E G +P+  T   +IN  
Sbjct: 623 KLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCL 682

Query: 674 CNAGNWQEALRLYKEMLDREIEPD 697
           C      EA  +   M+ + + P+
Sbjct: 683 CVEDRVYEAAGIIHRMVQKGLVPE 706



 Score =  248 bits (634), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 162/561 (28%), Positives = 270/561 (48%), Gaps = 18/561 (3%)

Query: 103 KPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVL 162
           +P  ALR    + +Q G + +   +CT++    E       Y             +   +
Sbjct: 161 RPHAALRLLNNMSSQ-GCEMNVVAYCTVVGGFYEENFKDEGYE------------LFGKM 207

Query: 163 IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG 222
           +  G+S C+S    + LL +  KK  V++C  + +K+++ G+LP++   N  I+ L   G
Sbjct: 208 LASGVSLCLST--FNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKG 265

Query: 223 -FSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY 281
                 R V R++ + G KP +VTYN ++   CK  + QEA   L ++   G  P+  TY
Sbjct: 266 ELDAAVRMVGRLIDQ-GPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTY 324

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
           N LI G+ + G ++ A  ++ + +  G      +Y  +I G   +G    AL L  E + 
Sbjct: 325 NTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALG 384

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
           +G+ P +  YN LI GL   G + +A     EM  K +IP++ ++N L+ G C+ G + +
Sbjct: 385 KGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSD 444

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           A  L   + S+   P + T+N LI G      +E A ++ + M++ G+ PDV TY  ++N
Sbjct: 445 ADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLN 504

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
           G CK        E +  M+ KG  P+ F +   +    +     +A  L EEM  K   P
Sbjct: 505 GLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNP 564

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP-DHITYTSIIHASLEMGDLRRGRDL 580
           D +T+  L+ G CK G L+ A  L RKM     +     TY  IIHA  E  ++     L
Sbjct: 565 DAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKL 624

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
           F  M+ + L P   TY +++      G ++L + +  EM   G  P++ T   +IN LC 
Sbjct: 625 FQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCV 684

Query: 641 LRRIDQAYGLFIDMEEEGILP 661
             R+ +A G+   M ++G++P
Sbjct: 685 EDRVYEAAGIIHRMVQKGLVP 705



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 9/170 (5%)

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV- 594
           + +LE  N + ++   DGF     TY SII      G      ++  +M R+ +   ++ 
Sbjct: 21  MKALEMFNSMRKE---DGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDM-RQNVGNHMLE 76

Query: 595 -TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
             Y   +  +  +G+++ A   F  M      P V +YNA+++ L      DQA+ +++ 
Sbjct: 77  GVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMR 136

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD---YCT 700
           M + GI P+ Y++TI +   C       ALRL   M  +  E +   YCT
Sbjct: 137 MRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCT 186


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  301 bits (772), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 184/624 (29%), Positives = 313/624 (50%), Gaps = 31/624 (4%)

Query: 82  HFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLR 141
           H       P  + + L +++  P+ AL+FF+    + G +     +C +  IL       
Sbjct: 86  HLSDSALAPIWVSKALVKLKGDPKSALKFFKEAGARAGFRHAAESYCVLAHILFCGMFYL 145

Query: 142 SAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLR 201
            A  V++  +          L+G     C      D   ++++ +++      VF+ +  
Sbjct: 146 DARSVIKEWI----------LLGREFPGC------DFFDMLWSTRNVCRPGFGVFDTLF- 188

Query: 202 NGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQE 261
                          VL D G   +AR+ +  M +F + P + + N +L    K  +   
Sbjct: 189 --------------NVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGL 234

Query: 262 ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC 321
           AL    +M   G SP+  TYN++I   +R G+LE AR L  +M   GL+    +YN +I 
Sbjct: 235 ALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLID 294

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           GY + G+L  A+++ EEM   G  P + TYN LI   CK+ R+  A      M ++ + P
Sbjct: 295 GYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQP 354

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           ++++Y+TL+  +C++G + EA   F ++    L P   TY +LID  C+ GDL  A +L+
Sbjct: 355 NVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLE 414

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
             M   G+  +++TYT +++G C+ G +  A E F  +L+ G   ++  YT+   G +K 
Sbjct: 415 SEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKA 474

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
               +A  + EEM  K   PDL+ Y   + GLC+   +E++  ++R+M+  G   +   Y
Sbjct: 475 KMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIY 534

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
           T++I A  ++G      +L   M   G+  T+VTY VLI      G ++ A  YF  M  
Sbjct: 535 TTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTR 594

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
            G++PN++ Y ALI+GLC+   +++A  LF +M ++GI P+K  YT LI+ N   GN  E
Sbjct: 595 NGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGE 654

Query: 682 ALRLYKEMLDREIEPDYCTHSALL 705
           AL L   M++  +E D C +++L+
Sbjct: 655 ALSLRNRMVEIGMELDLCAYTSLI 678



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 175/592 (29%), Positives = 285/592 (48%), Gaps = 28/592 (4%)

Query: 101 REKPRIALRFFRWVETQPGVKRDEF-VFCTILEILIESGLL---RSAYW------VVETV 150
           RE P     FF  + +   V R  F VF T+  +L++ G+L   R  +W      V+  V
Sbjct: 159 REFP--GCDFFDMLWSTRNVCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKV 216

Query: 151 VCVN--MHGILDVLIGG------------GLSSCVSIKILDLLLLIYTKKSMVEQCLLVF 196
              N  +H +     GG            GLS   S+   ++++    ++  +E    +F
Sbjct: 217 RSCNELLHRLSKSSKGGLALSFFKDMVVAGLSP--SVFTYNMVIGCLAREGDLEAARSLF 274

Query: 197 NKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKE 256
            +M   GL PD+   N +I      G    A  V+  M + G +P ++TYN++++ FCK 
Sbjct: 275 EEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKF 334

Query: 257 GEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSY 316
             + +A E L  M+ RG  PN VTY+ LI  F + G L +A     DM+++GL+ +  +Y
Sbjct: 335 ERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTY 394

Query: 317 NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
             +I    + G L EA  LE EM   GV   + TY  L+ GLC+ GR+ +A   F  +L+
Sbjct: 395 TSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLK 454

Query: 377 KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
                +   Y +L +GY ++  + +A  + +E+  +NL P ++ Y T I GLCR  ++E 
Sbjct: 455 AGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIED 514

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
           +  +   M++ G+  +   YT +++   K+G  + A     EM   G++     Y   I 
Sbjct: 515 SMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLID 574

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
           G  K+G   +A R  + M   G  P+++ Y  L+ GLCK   LEEA  L  +M+  G  P
Sbjct: 575 GLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISP 634

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
           D + YTS+I  +++ G+      L N M+  G+   L  YT LI   +  G+++LA    
Sbjct: 635 DKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLL 694

Query: 617 SEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
            EM  KGI P+ +    L+     L  I++A  L  DM   G++      T+
Sbjct: 695 DEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGLISGTIDITV 746



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 127/421 (30%), Positives = 194/421 (46%), Gaps = 36/421 (8%)

Query: 341 TRGVA-PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
           TR V  P    ++ L   L   G + +AR  F++M +  V+P + S N LL+   +S   
Sbjct: 173 TRNVCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKG 232

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
           G A   F ++    L P+V TYN +I  L R GDLE A+ L E M  +G+ PD++TY  +
Sbjct: 233 GLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSL 292

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           ++G  K+G L+ A   F EM   G +PD   Y + I    K     +A+     M  +G 
Sbjct: 293 IDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGL 352

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL----- 574
            P+++TY+ L+   CK G L EAN+    M+  G  P+  TYTS+I A+ ++GDL     
Sbjct: 353 QPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFK 412

Query: 575 ------------------------------RRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
                                         R   +LF  +L+ G +     YT L H + 
Sbjct: 413 LESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYI 472

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
               +E A     EM  K ++P+++ Y   I GLCR   I+ +  +  +M + G+  N Y
Sbjct: 473 KAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSY 532

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
            YT LI+     G   EA+ L +EM D  I+    T+  L+           AV Y + +
Sbjct: 533 IYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHM 592

Query: 725 T 725
           T
Sbjct: 593 T 593


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  301 bits (771), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 167/510 (32%), Positives = 269/510 (52%), Gaps = 6/510 (1%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V+  M+   ++PDV     +IK     G  +K + V   M E   KP++ TYN  +   C
Sbjct: 229 VYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLC 287

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           + G + EALE+   M  +G  P+G TY +L+ GF +    ++A+ +   M   GL  +  
Sbjct: 288 QTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRF 347

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +Y  +I G+ ++G + EAL +++EM+TRG+   + TYN +I G+ K G ++ A   F EM
Sbjct: 348 TYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEM 407

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           L   + PD  +YN L+ GY +S ++ +A  L  E+++R L P+  TY+ LI GLC   DL
Sbjct: 408 LMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDL 467

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A ++ + MI  G+ P+V  Y  ++    +     MA E    M+  G+ PD F Y   
Sbjct: 468 QKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCL 527

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I G  +     EA  L  +M  KG  P+  TY   ++   K G ++ A    + M+  G 
Sbjct: 528 IIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGI 587

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
           +P+++ YT +I    ++G+       F  ML KGL P +  Y+ +IH+ +  G+ + A  
Sbjct: 588 VPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMG 647

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE-- 672
            F +    G+ P+V  YN+LI+G C+   I++A  L+ +M   GI PN   Y  LIN+  
Sbjct: 648 VFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYG 707

Query: 673 NCNAGNWQEALRLYKEMLDREIEPD---YC 699
            C +GN  EA +L+ EM+ + I PD   YC
Sbjct: 708 YCKSGNLTEAFKLFDEMISKGISPDGYIYC 737



 Score =  278 bits (711), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 165/524 (31%), Positives = 276/524 (52%), Gaps = 3/524 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K+  +E+ L + ++M+  GL  +V   N +I  +   G   KA  ++  M   GI+P 
Sbjct: 356 FIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPD 415

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             TYN ++D + K  +M +A ELL EM+ R  +P+  TY+VLI+G   + +L++A  ++ 
Sbjct: 416 TWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLD 475

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M++ G+K +   Y  +I  Y ++     A+ L + M+  GV P L  YN LI GLC+  
Sbjct: 476 QMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAK 535

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           +V +A+    +M  K + P+  +Y   +  Y +SG I  A   F ++ S  +VP  V Y 
Sbjct: 536 KVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYT 595

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            LI G C  G+   A    + M+ +G++PD+  Y+ +++   K G    A   F + L+ 
Sbjct: 596 ILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKT 655

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV--HGLCKLGSLE 540
           G+ PD F Y + I+G  K GD  +A +L +EML  G  P+++ YN L+  +G CK G+L 
Sbjct: 656 GVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLT 715

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA +L  +M+  G  PD   Y  +I    + G+L +   LF+   +K +  +L  +  LI
Sbjct: 716 EAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSLI 774

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
            +    G++  A   F +M  K + PN++TY  LI+   +   +++A  LF+DME   I+
Sbjct: 775 DSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNII 834

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
           PN  TYT L+      GN  + + L+K+M  R I  D   +  +
Sbjct: 835 PNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVM 878



 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 158/483 (32%), Positives = 243/483 (50%), Gaps = 3/483 (0%)

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           KA EV   M   G+KP++  Y T++ ++ +E   + A+ELL  M   G  P+   YN LI
Sbjct: 469 KANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLI 528

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            G  R  ++E+A+ L+ DM + G+K +AH+Y   I  YS+ G +  A    ++M++ G+ 
Sbjct: 529 IGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIV 588

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P    Y ILI G C  G   +A   F  ML K +IPDI +Y+ +++   ++G   EA  +
Sbjct: 589 PNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGV 648

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN--GS 463
           F +     +VP V  YN+LI G C+ GD+E A QL + M++ GI P+++ Y  ++N  G 
Sbjct: 649 FLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGY 708

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
           CK GNL+ A + F+EM+ KG+ PD + Y   I G  K G+  +A  L  E   K     L
Sbjct: 709 CKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG-SL 767

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
             +N L+   CK G + EA EL   MV     P+ +TYT +I A  +   +     LF +
Sbjct: 768 SAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLD 827

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           M  + + P  +TYT L+ ++   G        F +M+ +GI  + I Y  + +  C+  +
Sbjct: 828 METRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGK 887

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSA 703
             +A  L      EGI      +  LI   C        L L  EM   E+     T + 
Sbjct: 888 SLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNT 947

Query: 704 LLL 706
           LLL
Sbjct: 948 LLL 950



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 152/493 (30%), Positives = 266/493 (53%), Gaps = 3/493 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V ++M+RNG+ P+V     +IK          A E+ ++M   G+ P +  YN ++   C
Sbjct: 473 VLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLC 532

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           +  +++EA  LL +M  +G  PN  TY   I  +S++GE++ A    +DML  G+  +  
Sbjct: 533 RAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNV 592

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
            Y  +I G+ + G  VEAL+  + M+ +G+ P +  Y+ +I+ L K G+  +A   F + 
Sbjct: 593 IYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKF 652

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID--GLCRYG 432
           L+  V+PD+  YN+L+ G+C+ G+I +A  L+DE+    + P +V YNTLI+  G C+ G
Sbjct: 653 LKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSG 712

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
           +L  A +L + MI++GI PD   Y I+++G  K GNL  A   F+E  +K +     A+ 
Sbjct: 713 NLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFN 771

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
           + I    K G   EA  L ++M+ K   P+++TY +L+    K   +EEA +L   M   
Sbjct: 772 SLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETR 831

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
             IP+ +TYTS++ +  ++G+  +   LF +M  +G++   + Y V+  A+   G+   A
Sbjct: 832 NIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEA 891

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
               ++  V+GI+     ++ALI  LC+ ++I     L  +M +E +  +  T   L+  
Sbjct: 892 LKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLG 951

Query: 673 NCNAGNWQEALRL 685
              +GN  EA ++
Sbjct: 952 FYKSGNEDEASKV 964



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 124/386 (32%), Positives = 197/386 (51%), Gaps = 1/386 (0%)

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
           MV   + P + TY  +I   CK G V   +    EM  K   P++ +YN  + G C++G 
Sbjct: 233 MVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTGA 291

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           + EA  +   +  + L P   TY  L+DG C+    + A+ + E+M + G+ P+  TYT 
Sbjct: 292 VDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTA 351

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           +++G  K GN+  A    +EM+ +GL+ +   Y   I G  K G+ ++A  L  EML  G
Sbjct: 352 LIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAG 411

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
             PD  TYN+L+ G  K   + +A ELL +M      P   TY+ +I       DL++  
Sbjct: 412 IEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKAN 471

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           ++ + M+R G+ P +  Y  LI A+    R E+A      M   G+ P++  YN LI GL
Sbjct: 472 EVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGL 531

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
           CR +++++A  L +DM E+GI PN +TY   IN    +G  Q A R +K+ML   I P+ 
Sbjct: 532 CRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNN 591

Query: 699 CTHSALLLKQLDKDYKVHAVEYLESL 724
             ++ L+    D    V A+   + +
Sbjct: 592 VIYTILIKGHCDVGNTVEALSTFKCM 617



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 145/511 (28%), Positives = 247/511 (48%), Gaps = 42/511 (8%)

Query: 158 ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDV--KNCNRII 215
           +LD +I  G+    ++ +   L+  Y ++S  E  + +   M+ NG+LPD+   NC  II
Sbjct: 473 VLDQMIRNGVKP--NVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNC-LII 529

Query: 216 KVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCS 275
            + R      +A+ +   MGE GIKP+  TY   ++ + K GE+Q A     +M   G  
Sbjct: 530 GLCRAKKVE-EAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIV 588

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           PN V Y +LI G    G   +A    + ML+ GL     +Y+ II   S+ G   EA+ +
Sbjct: 589 PNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGV 648

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL--YGY 393
             + +  GV P +  YN LI G CK G +  A   + EML   + P+I+ YNTL+  YGY
Sbjct: 649 FLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGY 708

Query: 394 CRSGNIGEAFLLFDELRSRNLVP----------------------------------TVV 419
           C+SGN+ EAF LFDE+ S+ + P                                  ++ 
Sbjct: 709 CKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLS 768

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
            +N+LID  C++G +  A++L ++M+++ + P+++TYTI+++   K   +  A + F +M
Sbjct: 769 AFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDM 828

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
             + + P+   YT+ +    ++G+  +   L ++M A+G   D I Y V+    CK G  
Sbjct: 829 ETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKS 888

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
            EA +LL K + +G   +   + ++I    +   +    +L + M ++ LS +  T   L
Sbjct: 889 LEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTL 948

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
           +      G  + A      MQ  G  P  ++
Sbjct: 949 LLGFYKSGNEDEASKVLGVMQRLGWVPTSLS 979



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 212/418 (50%), Gaps = 3/418 (0%)

Query: 182 IYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKP 241
           +Y+K   ++     F  ML +G++P+      +IK   D G +V+A   ++ M E G+ P
Sbjct: 565 LYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIP 624

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
            I  Y+ ++ S  K G+ +EA+ +  +    G  P+   YN LI+GF + G++E+A  L 
Sbjct: 625 DIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLY 684

Query: 302 RDMLKLGLKVSAHSYNPIIC--GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
            +ML  G+  +   YN +I   GY + G L EA  L +EM+++G++P    Y ILI G  
Sbjct: 685 DEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCG 744

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
           K G +  A   F E  +K+V   + ++N+L+  +C+ G + EA  LFD++  + L P +V
Sbjct: 745 KEGNLEKALSLFHEAQQKSV-GSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIV 803

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
           TY  LID   +   +E A+QL  +M  + I+P+ +TYT ++    ++GN       F +M
Sbjct: 804 TYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDM 863

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
             +G+  D  AY    +   K G + EA +L  + L +G   +   ++ L+  LCK   +
Sbjct: 864 EARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQI 923

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
               ELL +M  +       T  +++    + G+      +   M R G  PT ++ T
Sbjct: 924 STVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLT 981



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/377 (31%), Positives = 199/377 (52%), Gaps = 3/377 (0%)

Query: 191 QCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTML 250
           + L  F  ML  GL+PD++  + II  L  NG + +A  V+    + G+ P +  YN+++
Sbjct: 609 EALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLI 668

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT--GFSRNGELEQARGLIRDMLKLG 308
             FCKEG++++A +L  EM   G +PN V YN LI   G+ ++G L +A  L  +M+  G
Sbjct: 669 SGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKG 728

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           +    + Y  +I G  ++G L +AL+L  E   + V  +L+ +N LI   CK G+V +AR
Sbjct: 729 ISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSLIDSFCKHGKVIEAR 787

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F +M+ K + P+I++Y  L+  Y ++  + EA  LF ++ +RN++P  +TY +L+   
Sbjct: 788 ELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSY 847

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
            + G+      L ++M  +GI  D I Y +M +  CK G    A +  N+ L +G++ + 
Sbjct: 848 NQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLED 907

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             +   I    K    S    L  EM  +       T N L+ G  K G+ +EA+++L  
Sbjct: 908 DVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGV 967

Query: 549 MVGDGFIPDHITYTSII 565
           M   G++P  ++ T  I
Sbjct: 968 MQRLGWVPTSLSLTDSI 984



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/428 (25%), Positives = 207/428 (48%), Gaps = 23/428 (5%)

Query: 317 NP-IICGYSEKGLLVEALNLEEEM---VTRGVAPT-LATYNILIYGLCKWGRVSDARHRF 371
           NP I+C   +K  + +++ L+       ++   P  L +Y+IL   LC  G +  A +  
Sbjct: 84  NPEIVCSVLQKSEIDDSVRLQNFFHWSSSKMSTPQYLHSYSILAIRLCNSGLIHQADNML 143

Query: 372 FEMLRKNVIP-----------------DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
            ++L+    P                 ++  ++  +  +   G + EA  +F    S   
Sbjct: 144 EKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGF 203

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            PT++  N L+  L +   + +  ++  +M+   I+PDV TYT ++   CK+G++   + 
Sbjct: 204 FPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKM 263

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
             +EM  K  +P+ F Y   I G  + G   EA  +++ M+ KG  PD  TY +LV G C
Sbjct: 264 VLSEM-EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFC 322

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           K    +EA  +   M   G  P+  TYT++I   ++ G++     + + M+ +GL   +V
Sbjct: 323 KQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVV 382

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           TY  +I   A  G +  A   F+EM + GI P+  TYN LI+G  +   + +A  L  +M
Sbjct: 383 TYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEM 442

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYK 714
           +   + P+ +TY++LI+  C++ + Q+A  +  +M+   ++P+   +  L+   + +   
Sbjct: 443 KARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRY 502

Query: 715 VHAVEYLE 722
             A+E L+
Sbjct: 503 EMAIELLK 510



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 159/350 (45%), Gaps = 38/350 (10%)

Query: 184 TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
           +K    ++ + VF K L+ G++PDV   N +I      G   KA ++Y  M   GI P+I
Sbjct: 637 SKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNI 696

Query: 244 VTYNTMLDSF--CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
           V YNT+++ +  CK G + EA +L  EM  +G SP+G  Y +LI G  + G LE+A  L 
Sbjct: 697 VVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLF 756

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
            +  +  +  S  ++N +I  + + G ++EA  L ++MV + + P + TY ILI    K 
Sbjct: 757 HEAQQKSVG-SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKA 815

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
             + +A   F +M  +N+IP+ ++Y +LL  Y + GN  +   LF ++ +R +    + Y
Sbjct: 816 EMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAY 875

Query: 422 -----------------------------------NTLIDGLCRYGDLEVAQQLKENMIN 446
                                              + LI  LC+   +    +L   M  
Sbjct: 876 GVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGK 935

Query: 447 QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
           + +     T   ++ G  K GN   A +    M R G  P   + T  I+
Sbjct: 936 EELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTDSIS 985


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  301 bits (771), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 200/665 (30%), Positives = 323/665 (48%), Gaps = 67/665 (10%)

Query: 104 PRIALRFFRWVETQPG---VKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILD 160
           P+  L FF W + + G    ++D  V   +   L  S     A  +++ ++  N    L 
Sbjct: 78  PKRLLNFFYWSQHKMGTSTAQQDLDVLSALAVNLCNSNWYGPASDLIKCII-RNSDSPLA 136

Query: 161 VLIGGGLSSCV-------SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNR 213
           VL  G +  C        +  I D+L+  Y K   + + + VF         P + +CN 
Sbjct: 137 VL--GSIVKCYRSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNS 194

Query: 214 II-KVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQ------------ 260
           ++  +L+ N   +  + V+  M    + P + TY  M+ + CK G ++            
Sbjct: 195 LLGDLLKGNKVELFWK-VFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEK 253

Query: 261 -----EALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
                EA+EL   M  +G  P+  TY++LI GF       +A+ ++ +M+ +GLK    +
Sbjct: 254 ARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPIT 313

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           YN +I G+  +G + +A  +++EMV  G+   L  +N L+ G+CK G++  A     EM+
Sbjct: 314 YNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMM 373

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL- 434
            K V PD  +Y+ L+ G+CR  N+  AF L DE++ R L PTV+TY+ +I+GLCR G+L 
Sbjct: 374 EKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQ 433

Query: 435 ----------------------------------EVAQQLKENMINQGILPDVITYTIMV 460
                                             E ++ + E M  QGILPDV  Y  ++
Sbjct: 434 GTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLI 493

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
            G CK   +  AR +  EML + L+P+   Y   I G  K G+   A R   EML+ G  
Sbjct: 494 IGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVL 553

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           P++  Y  L+ G CK G++ EA  + R ++    + D  TY+ +IH     G +     +
Sbjct: 554 PNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGI 613

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
           F+ +  KGL P   TY  LI     +G ++ A     EM +KGI P+++TYN LI+GLC+
Sbjct: 614 FSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCK 673

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
              I++A  LF D+E  G+ PN  TY  +++  C + N   A +L +EML R + PD   
Sbjct: 674 AGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFI 733

Query: 701 HSALL 705
           ++ +L
Sbjct: 734 YNVIL 738



 Score =  296 bits (757), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 177/538 (32%), Positives = 283/538 (52%), Gaps = 44/538 (8%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           + ++M +  L P V   + II  L   G       + R M   G+KP+ V Y T++ +  
Sbjct: 403 LLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHA 462

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           KEG ++E+  +L  M+ +G  P+   YN LI GF +   +E+AR  + +ML+  L+ +AH
Sbjct: 463 KEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAH 522

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +Y   I GYS+ G +  A     EM++ GV P +  Y  LI G CK G V++A   F  +
Sbjct: 523 TYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFI 582

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           L + V+ D+ +Y+ L++G  R+G + EAF +F EL+ + L+P   TYN+LI G C+ G++
Sbjct: 583 LSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNV 642

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A QL E M  +GI PD++TY I+++G CK G +  A+  F+++  +GL P+   Y   
Sbjct: 643 DKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAM 702

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV-------------------------- 528
           + G  K  + + A++L EEML +G PPD   YNV                          
Sbjct: 703 VDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF 762

Query: 529 --------LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
                   L+ G CK G L+EAN LL +M+   FIP+H+TYTS+I  + + G +   + L
Sbjct: 763 ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRL 822

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
           +  M  + + PT  TYT L+H +   G +      F EM  KGI P+ +TY  +I+  CR
Sbjct: 823 WLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCR 882

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN--------AGNWQEALRLYKEML 690
              + +A  L  ++  +G +P K  + + +   C+        AGN  EA  + + M+
Sbjct: 883 EGNVMEACKLKDEILVKG-MPMKSGFRLGL-PTCSVIARGFQIAGNMDEAAEVLRSMV 938



 Score =  296 bits (757), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 175/564 (31%), Positives = 284/564 (50%), Gaps = 36/564 (6%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           D+L+  +  +    +  L+  +M+  GL P+    N +I      G   +A  +   M  
Sbjct: 280 DILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVA 339

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            GI+ +++ +NT+L+  CK G+M++ALE++ EM  +G  P+  TY++LI G  R   + +
Sbjct: 340 CGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMAR 399

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  L+ +M K  L  +  +Y+ II G    G L     +  EMV  G+ P    Y  L+ 
Sbjct: 400 AFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMT 459

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
              K GRV ++R     M  + ++PD+  YN+L+ G+C++  + EA     E+  R L P
Sbjct: 460 AHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRP 519

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE-- 474
              TY   IDG  + G++E+A +    M++ G+LP+V  YT ++ G CK GN++ A    
Sbjct: 520 NAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVF 579

Query: 475 ---------------------------------FFNEMLRKGLQPDRFAYTTQIAGELKL 501
                                             F+E+  KGL P+ F Y + I+G  K 
Sbjct: 580 RFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQ 639

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
           G+  +A +L EEM  KG  PD++TYN+L+ GLCK G +E A  L   + G G  P+ +TY
Sbjct: 640 GNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTY 699

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
            +++    +  +      L   ML +G+ P    Y V+++      + E A   F EM  
Sbjct: 700 AAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLE 759

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
           KG   + +++N LI G C+  ++ +A  L  +M E+  +PN  TYT LI+ NC AG   E
Sbjct: 760 KGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGE 818

Query: 682 ALRLYKEMLDREIEPDYCTHSALL 705
           A RL+ EM +R + P   T+++LL
Sbjct: 819 AKRLWLEMQERNVMPTAKTYTSLL 842



 Score =  296 bits (757), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 154/520 (29%), Positives = 295/520 (56%), Gaps = 10/520 (1%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSV--KAREVYRMMG 235
           +LL +  K  ++++ + +   M+  GL+PD+   + +I     NGF +  ++RE   M+ 
Sbjct: 246 VLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILI-----NGFCMEKRSREAKLMLL 300

Query: 236 EF---GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
           E    G+KP  +TYN ++D F ++G++++A  +  EM   G   N + +N L+ G  + G
Sbjct: 301 EMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAG 360

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
           ++E+A  ++++M++ G++  + +Y+ +I G+     +  A  L +EM  R +APT+ TY+
Sbjct: 361 KMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYS 420

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
           ++I GLC+ G +        EM+   + P+ + Y TL+  + + G + E+ ++ + +R +
Sbjct: 421 VIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQ 480

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
            ++P V  YN+LI G C+   +E A+     M+ + + P+  TY   ++G  K G + +A
Sbjct: 481 GILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIA 540

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
             +FNEML  G+ P+   YT  I G  K G+ +EA+ +   +L++    D+ TY+VL+HG
Sbjct: 541 DRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHG 600

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           L + G + EA  +  ++   G +P+  TY S+I  S + G++ +   L   M  KG++P 
Sbjct: 601 LSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPD 660

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
           +VTY +LI      G +E A   F +++ +G+ PN +TY A+++G C+ +    A+ L  
Sbjct: 661 IVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLE 720

Query: 653 DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
           +M   G+ P+ + Y +++N  C    +++AL L++EML++
Sbjct: 721 EMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEK 760



 Score =  292 bits (748), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 169/558 (30%), Positives = 297/558 (53%), Gaps = 36/558 (6%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + ++  +EQ   + ++M+  G+  ++   N ++  +   G   KA E+ + M E G++P 
Sbjct: 321 FMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPD 380

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             TY+ +++  C+   M  A ELL EM+ R  +P  +TY+V+I G  R G L+    ++R
Sbjct: 381 SQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILR 440

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M+  GLK +A  Y  ++  ++++G + E+  + E M  +G+ P +  YN LI G CK  
Sbjct: 441 EMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAK 500

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R+ +AR    EML + + P+  +Y   + GY ++G +  A   F+E+ S  ++P V  Y 
Sbjct: 501 RMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYT 560

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            LI+G C+ G++  A  +   ++++ +L DV TY+++++G  + G +  A   F+E+  K
Sbjct: 561 ALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEK 620

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           GL P+ F Y + I+G  K G+  +A +L EEM  KG  PD++TYN+L+ GLCK G +E A
Sbjct: 621 GLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERA 680

Query: 543 NELLRKMVGDGFIPDHITYTSIIH---------ASLEMGD-------------------- 573
             L   + G G  P+ +TY +++          A+ ++ +                    
Sbjct: 681 KNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNF 740

Query: 574 ------LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
                   +  DLF  ML KG + T V++  LI  +   G+L+ A     EM  K   PN
Sbjct: 741 CCKEEKFEKALDLFQEMLEKGFAST-VSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPN 799

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYK 687
            +TY +LI+  C+   + +A  L+++M+E  ++P   TYT L++   N GN  E   L++
Sbjct: 800 HVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFE 859

Query: 688 EMLDREIEPDYCTHSALL 705
           EM+ + IEPD  T+  ++
Sbjct: 860 EMVAKGIEPDKMTYYVMI 877



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/419 (31%), Positives = 224/419 (53%), Gaps = 7/419 (1%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           ++ I   L+  + K+  V +   VF  +L   +L DV+  + +I  L  NG   +A  ++
Sbjct: 555 NVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIF 614

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             + E G+ P+  TYN+++   CK+G + +A +LL EM  +G +P+ VTYN+LI G  + 
Sbjct: 615 SELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKA 674

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           GE+E+A+ L  D+   GL  +  +Y  ++ GY +      A  L EEM+ RGV P    Y
Sbjct: 675 GEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIY 734

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           N+++   CK  +   A   F EML K      +S+NTL+ GYC+SG + EA  L +E+  
Sbjct: 735 NVILNFCCKEEKFEKALDLFQEMLEKG-FASTVSFNTLIEGYCKSGKLQEANHLLEEMIE 793

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           +  +P  VTY +LID  C+ G +  A++L   M  + ++P   TYT +++G   +GN+S 
Sbjct: 794 KQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSE 853

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD------LIT 525
               F EM+ KG++PD+  Y   I    + G+  EA +L++E+L KG P        L T
Sbjct: 854 VSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPT 913

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM 584
            +V+  G    G+++EA E+LR MV  G++ +  +   ++  +    +     +L   M
Sbjct: 914 CSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 972


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  301 bits (771), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 180/544 (33%), Positives = 279/544 (51%), Gaps = 12/544 (2%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF---GIKP 241
           K   V++ + +F +M+   + PDV     +I  L   G   + +E Y +  E    G  P
Sbjct: 7   KSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGL---GKQRRVKEAYDLFEEARAKGCHP 63

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGR-GCSPNGVTYNVLITGFSRNGELEQARGL 300
           ++VTYNTM+D  CK G ++ AL L  +M    G  P  VTY+ LI G  R+ E+++   L
Sbjct: 64  TVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKL 123

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           + +M   G   +A +YN ++     +G   EA +L E+M   G  P L T+ ++I GLCK
Sbjct: 124 LEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCK 183

Query: 361 WGRVSDARHRFFEM--LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
            G +  A     EM  +   + PD+I++N++L G C+   I +A  +F     R   P V
Sbjct: 184 EGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNV 243

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           VTY+TLIDGL +   ++ A QL   M+  G   + +TY+ +V+G  K+G +  A     +
Sbjct: 244 VTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQ 303

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M   G  PD   Y T I G  K     EA  L  EML  GF P ++TY  L HGLC+ G 
Sbjct: 304 MRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGR 363

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR-KGLSPTLVTYT 597
            +EA E+L  M   G  P+ ITY+SI+    + G +      F  M R + ++P ++ Y+
Sbjct: 364 FDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYS 423

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
            LI      G+++ A+ +   M   G  P+V+T++ LINGLC   RID    LF  M E 
Sbjct: 424 ALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAER 483

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL--LKQLDKDYKV 715
           G +P+  TY  L++  C A    EA  L+++M    + PD  T   ++  L ++++D   
Sbjct: 484 GCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDA 543

Query: 716 HAVE 719
             ++
Sbjct: 544 KRIQ 547



 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 160/508 (31%), Positives = 262/508 (51%), Gaps = 4/508 (0%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG-EFGIKPSI 243
           K+  V++   +F +    G  P V   N +I  L   G    A  +Y  M   FG +P++
Sbjct: 42  KQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTV 101

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           VTY+T++D  C++ E+ +  +LL EM GRGC+PN VTYN L+      G  ++A  L+  
Sbjct: 102 VTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQ 161

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM--VTRGVAPTLATYNILIYGLCKW 361
           M   G      ++  II G  ++G +  A  + +EM  +  G++P + T+N ++ GLCK 
Sbjct: 162 MAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKE 221

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
            R+ DA + F   L +   P++++Y+TL+ G  +   + EA  L  ++         VTY
Sbjct: 222 QRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTY 281

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           +T++DGL + G +E A  +   M + G LPD +TY  +++G  K   L  A     EML 
Sbjct: 282 STVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLE 341

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
            G  P    YTT   G  + G   EA  + + M A+G  P+ ITY+ +V GLCK G + E
Sbjct: 342 AGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTE 401

Query: 542 ANELLRKMVGDGFIPDH-ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           A     KM  D  +  H I Y+++I    + G +    +    M+R G  P +VT+++LI
Sbjct: 402 ALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILI 461

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
           +     GR++     F  M  +G  P+++TY  L++ LCR  R+D+A+ LF  M  +G+ 
Sbjct: 462 NGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLS 521

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKE 688
           P++ T   +I+        ++A R+  E
Sbjct: 522 PDRSTRRTMIHGLLEVNRDEDAKRIQDE 549



 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 149/461 (32%), Positives = 239/461 (51%), Gaps = 4/461 (0%)

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           M+D  CK  ++ +A+ L  +M  +   P+ VTY  LI G  +   +++A  L  +    G
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR-GVAPTLATYNILIYGLCKWGRVSDA 367
              +  +YN +I G  + G +  AL L ++M    G  PT+ TY+ LI GLC+   V   
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
                EM  +   P+ ++YNTL+      G   EAF L +++ +    P ++T+  +I G
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 428 LCRYGDLEVAQQLKENM--INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           LC+ G++E A ++ + M  I  G+ PDVIT+  +++G CK   +  A   F   L +G +
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           P+   Y+T I G  K+    EA +L  +M+  G   + +TY+ +V GL K+G +E+A  +
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVV 300

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
           LR+M   G +PD +TY ++I    +   LR    L   ML  G  P++VTYT L H    
Sbjct: 301 LRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCR 360

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM-EEEGILPNKY 664
            GR + A      M  +G  PN ITY+++++GLC+  R+ +A G F  M  +E + P+  
Sbjct: 361 SGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVI 420

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            Y+ LI+  C AG   EA    + M+     PD  T S L+
Sbjct: 421 AYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILI 461



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 139/445 (31%), Positives = 230/445 (51%), Gaps = 4/445 (0%)

Query: 284 LITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG 343
           +I G  ++ ++++A  L + M+   +     +Y  +I G  ++  + EA +L EE   +G
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 344 VAPTLATYNILIYGLCKWGRVSDARHRFFEM-LRKNVIPDIISYNTLLYGYCRSGNIGEA 402
             PT+ TYN +I GLCK GR+ +A   + +M +     P +++Y+TL+ G CR   + + 
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
             L +E+  R   P  VTYNTL++ L   G  + A  L E M   G  P++IT+ +++ G
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 463 SCKMGNLSMAREFFNEM--LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
            CK G +  A    +EM  +  GL PD   + + + G  K     +A+ + +  L +G  
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           P+++TY+ L+ GL K+  ++EA +LL KMV  G   + +TY++++   L++G +     +
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVV 300

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
              M   G  P  VTY  LI     R RL  A     EM   G  P+V+TY  L +GLCR
Sbjct: 301 LRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCR 360

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
             R D+A  +   M   G  PN  TY+ +++  C AG   EAL  +++M   E+   +  
Sbjct: 361 SGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVI 420

Query: 701 HSALLLKQLDKDYKV-HAVEYLESL 724
             + L+  L K  K+  A E+LE +
Sbjct: 421 AYSALIDGLCKAGKIDEAYEFLERM 445



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 131/395 (33%), Positives = 207/395 (52%), Gaps = 6/395 (1%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNG-FSVKAREVYRM-MGEFGIKPSIVTYNTMLDS 252
           +  +M  NG  P++     IIK L   G      R V  M M E G+ P ++T+N++LD 
Sbjct: 158 LLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDG 217

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
            CKE  + +A  +      RGC PN VTY+ LI G S+  ++++A  L+  M++LG + +
Sbjct: 218 LCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRAN 277

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
             +Y+ ++ G  + G + +A+ +  +M   G  P   TYN LI G  K  R+ +A     
Sbjct: 278 TVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLR 337

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
           EML     P +++Y TL +G CRSG   EA  + D + +R   P  +TY++++DGLC+ G
Sbjct: 338 EMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAG 397

Query: 433 DLEVAQQLKENMI-NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAY 491
            +  A    E M  ++ + P VI Y+ +++G CK G +  A EF   M+R G  PD   +
Sbjct: 398 RVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTF 457

Query: 492 TTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
           +  I G    G       L   M  +G  PD++TY  LV  LC+   ++EA +L ++M  
Sbjct: 458 SILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRS 517

Query: 552 DGFIPDHITYTSIIHASLEMG---DLRRGRDLFNN 583
           DG  PD  T  ++IH  LE+    D +R +D  N+
Sbjct: 518 DGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDEENS 552



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 94/280 (33%), Positives = 147/280 (52%), Gaps = 1/280 (0%)

Query: 184 TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
           +K + +++ L +  KM+  G   +    + ++  L   G    A  V R M + G  P  
Sbjct: 254 SKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDA 313

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           VTYNT++D F K   ++EA+ LL EM   G  P+ VTY  L  G  R+G  ++A  ++  
Sbjct: 314 VTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDY 373

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV-TRGVAPTLATYNILIYGLCKWG 362
           M   G   +A +Y+ I+ G  + G + EAL   E+M     VAP +  Y+ LI GLCK G
Sbjct: 374 MAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAG 433

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           ++ +A      M+R   IPD+++++ L+ G C +G I     LF  +  R  VP +VTY 
Sbjct: 434 KIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYA 493

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
           TL+D LCR   ++ A  L + M + G+ PD  T   M++G
Sbjct: 494 TLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHG 533



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 103/211 (48%), Gaps = 1/211 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K+  + + + +  +ML  G  P V     +   L  +G   +A E+   M   G  P+
Sbjct: 323 FFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPN 382

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEM-QGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
            +TY++++D  CK G + EAL    +M +    +P+ + Y+ LI G  + G++++A   +
Sbjct: 383 AITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFL 442

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
             M++ G      +++ +I G  + G +   L L   M  RG  P + TY  L+  LC+ 
Sbjct: 443 ERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRA 502

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
            RV +A   F +M    + PD  +  T+++G
Sbjct: 503 SRVDEAFDLFQQMRSDGLSPDRSTRRTMIHG 533


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  301 bits (771), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 174/616 (28%), Positives = 308/616 (50%), Gaps = 23/616 (3%)

Query: 90  PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVET 149
           P ++ RVL R+++ P+ A+ FF W   + G K   F     L+ L+E+G           
Sbjct: 93  PAVVSRVLQRLKD-PQTAIVFFVWAGDR-GFKHSTFTRNCFLQTLLENGSSD-------- 142

Query: 150 VVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVK 209
                +  + + ++  G +         L++    + + +++   + +K    G  P+V 
Sbjct: 143 ----RIPAMFERMLDAGYAP--DSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVS 196

Query: 210 NCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM 269
               + +     G    A E++R +      P  + YN ++   C++ +   ALE L EM
Sbjct: 197 VYTILTRAFCKTGRLKDALEIFRNIPS----PDAIAYNAIIHGHCRKNDCDGALEFLKEM 252

Query: 270 QGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLL 329
             R  +P+  TYN+LI G  +  + ++A  ++ +M+  G+     ++N I+ G  + G  
Sbjct: 253 NERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKF 312

Query: 330 VEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTL 389
             A +L   M  R   P+  TYN LI GLCK   V  A+    E +    +PD+++Y+ L
Sbjct: 313 ERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSIL 372

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
             G C+ G I EAF L  E+  +   P +VTYNTLIDGLC+    E A +L E++++ G 
Sbjct: 373 ADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGF 432

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
           +PDV+TYTI+V+G CK G L  A +    ML++G  P    YT  + G  + G   EA+ 
Sbjct: 433 VPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHH 492

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           + +EM++K    D + Y  LV+G CK    +EA +++  + G  +I     Y +++    
Sbjct: 493 IFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYID---VYNALMDGYC 549

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
           + G L    ++F +M  +G  P + TY +++      G+++ AF +   M   G  P+V+
Sbjct: 550 KEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVV 609

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           +YN +I+GL +  +  +A  +   M + GI P+  TY  L+ + C    + +A+ + K M
Sbjct: 610 SYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNM 669

Query: 690 LDREIEPDYCTHSALL 705
           +   ++PD  T++ L+
Sbjct: 670 IKAGVDPDNVTYNTLI 685



 Score =  295 bits (754), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 163/532 (30%), Positives = 269/532 (50%), Gaps = 38/532 (7%)

Query: 208 VKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLW 267
            +NC   ++ L +NG S +   ++  M + G  P   TY+ ++ S C+  ++ +A  +L 
Sbjct: 127 TRNC--FLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLD 184

Query: 268 EMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKG 327
           + + RG  P    Y +L   F + G L+ A  + R++        A +YN II G+  K 
Sbjct: 185 KAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS----PDAIAYNAIIHGHCRKN 240

Query: 328 LLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYN 387
               AL   +EM  R VAP + TYNILI GLCK  +   A     EM+ + V PD +++N
Sbjct: 241 DCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFN 300

Query: 388 TLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
           +++ G C++G    A  L   +  RN  P+  TYNTLI GLC+  +++ A+ L +  ++ 
Sbjct: 301 SIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSS 360

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
           G +PDV+TY+I+ +G CK G +  A E   EM  KG  P+   Y T I G  K   T +A
Sbjct: 361 GFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKA 420

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
           Y L E +++ GF PD++TY ++V GLCK G L++A +++  M+  G  P  ITYT+++  
Sbjct: 421 YELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEG 480

Query: 568 SLEMGDLRRGRDLFNNMLRKGLS--------------------------------PTLVT 595
               G +     +F  M+ K  +                                P +  
Sbjct: 481 LCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDV 540

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           Y  L+  +   GRL+     F +M  +G  PN+ TYN +++GLC+  ++D+A+     M 
Sbjct: 541 YNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMH 600

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLK 707
             G +P+  +Y I+I+    A   +EA ++  +M+   I PD  T++ L+ +
Sbjct: 601 SAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQ 652



 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 167/550 (30%), Positives = 272/550 (49%), Gaps = 43/550 (7%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K+  +++   +  +M   G  P++   N +I  L     + KA E+   +   G  P +V
Sbjct: 378 KRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVV 437

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY  ++D  CKEG + +AL+++  M  RGC+P+ +TY  L+ G  R G +++A  + ++M
Sbjct: 438 TYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEM 497

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           +       A +Y  ++ GY +     EA  + + +  RG  P +  YN L+ G CK GR+
Sbjct: 498 VSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI--RGT-PYIDVYNALMDGYCKEGRL 554

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            +  + F +M  +  +P+I +YN ++ G C+ G + EAF   + + S   VP VV+YN +
Sbjct: 555 DEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNII 614

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           IDGL +    + A+Q+ + MI  GI PD +TY  ++   CK      A      M++ G+
Sbjct: 615 IDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGV 674

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEML----------------------------- 515
            PD   Y T I+G  +     +AY L  EML                             
Sbjct: 675 DPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQAL 734

Query: 516 -------AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
                    G   + +TYN+ +  LCK G L+EA+ LL +M     + D ++YT++I   
Sbjct: 735 LLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGL 791

Query: 569 LEMGDLRRGRDLFNNMLR-KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
            +   L R   L   M+  KGL  T  T+ +LI A     RL+ A      M  +G  P+
Sbjct: 792 CKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPS 851

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYK 687
           VITYN +I  LC+L ++D+A+ LF +M   GI+ +  +YT+LI   C  G  +EAL++ +
Sbjct: 852 VITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLE 911

Query: 688 EMLDREIEPD 697
           EM   + E D
Sbjct: 912 EMASSDCEID 921



 Score =  275 bits (704), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 178/598 (29%), Positives = 289/598 (48%), Gaps = 74/598 (12%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K S  ++   + ++M+  G+ PD    N I+  L   G   +A  +  +M E   +PS  
Sbjct: 273 KASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCC 332

Query: 245 TYNTML-----------------------------------DSFCKEGEMQEALELLWEM 269
           TYNT++                                   D  CK G + EA EL+ EM
Sbjct: 333 TYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEM 392

Query: 270 QGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLL 329
            G+GC+PN VTYN LI G  +  + E+A  L+  ++  G      +Y  I+ G  ++G L
Sbjct: 393 SGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRL 452

Query: 330 VEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISY--- 386
            +AL + E M+ RG  P++ TY  L+ GLC+ GRV +A H F EM+ K+   D ++Y   
Sbjct: 453 DKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSL 512

Query: 387 -----------------------------NTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
                                        N L+ GYC+ G + E   +F+++  R  VP 
Sbjct: 513 VNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPN 572

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           + TYN ++DGLC++G ++ A    E+M + G +PDV++Y I+++G  K      AR+  +
Sbjct: 573 IKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLD 632

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           +M++ G+ PD   Y T +A   K     +A  + + M+  G  PD +TYN L+ GL +  
Sbjct: 633 QMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTN 692

Query: 538 SLEEANELLRKMVGDG-FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
            L +A EL+ +M+ +G  +    TY +II    + G L++   L ++M   G+    VTY
Sbjct: 693 RLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTY 752

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM-E 655
            + I      GRL+ A    SEM    +R  V +Y  +I GLC+  ++D+A  L  +M  
Sbjct: 753 NIFIDRLCKEGRLDEASSLLSEMDT--LRDEV-SYTTVIIGLCKAEQLDRASKLAREMVA 809

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL--LKQLDK 711
            +G+    +T+ +LI+         EAL L   M+ R   P   T++ ++  L +LDK
Sbjct: 810 VKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDK 867



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 173/372 (46%), Gaps = 40/372 (10%)

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           V+  M   G  P+I TYN ++D  CK G++ EA   L  M   GC P+ V+YN++I G  
Sbjct: 560 VFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLF 619

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           +  + ++AR ++  M++ G+   A +YN ++  + ++    +A+ + + M+  GV P   
Sbjct: 620 KASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNV 679

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKN-VIPDIISYNTLLYGYCRSGNIGEAFLLFDE 408
           TYN LI GL +  R+ DA     EMLR   V+    +YNT++   C+ G + +A LL D 
Sbjct: 680 TYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDH 739

Query: 409 LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
           +    +    VTYN  ID LC+ G L+ A  L   M     L D ++YT ++ G CK   
Sbjct: 740 MTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQ 796

Query: 469 LSMAREFFNEML------------------------------------RKGLQPDRFAYT 492
           L  A +   EM+                                    ++G  P    Y 
Sbjct: 797 LDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYN 856

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
             I    KL    +A+ L +EM  +G     ++Y VL++GLC  G  +EA ++L +M   
Sbjct: 857 MVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASS 916

Query: 553 GFIPDHITYTSI 564
               D + +  +
Sbjct: 917 DCEIDDLKWEDV 928


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  301 bits (771), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 193/669 (28%), Positives = 335/669 (50%), Gaps = 48/669 (7%)

Query: 104 PRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILD--- 160
           P+ ALR+F+  ETQ G  R    +C +L IL+ S      +     ++   + G  D   
Sbjct: 74  PQSALRYFKRAETQRGFIRGVDAYCVLLHILMRS---PETHGHARKLLNRYVSGDSDPSP 130

Query: 161 VLIGGGLSSC-------VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNR 213
           V+    L +C       +  ++ + LL  Y + + +E  +  FN M+   ++P V   N 
Sbjct: 131 VVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNI 190

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
           ++  L       + R++Y  M   GI     T + M+ +  KEG ++EA E   E + RG
Sbjct: 191 LLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERG 250

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
              +   Y+++I    +         L+ +M + G   S  ++  +I     +G +VEAL
Sbjct: 251 VKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEAL 310

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
            L+EEM+  G    L     L+ G C  G +  A + F ++    + P+ ++Y+ L+ G 
Sbjct: 311 RLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGC 370

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTV----------------------------------V 419
           C SGNI +A  L+ +++   + P+V                                   
Sbjct: 371 CNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIF 430

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
           TYN ++  LC+ G ++ A  L +NM+NQG++P+V++Y  M+ G C+ GN+ MA   F++M
Sbjct: 431 TYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDM 490

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
           L + L+P+   Y+  I G  K GD+ +A  L ++ML+    P   T+N +++GLCK+G +
Sbjct: 491 LARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQM 550

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
            EA + L+  + +GFIP  +TY SI+   ++ G++     ++  M   G+SP +VTYT L
Sbjct: 551 SEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSL 610

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           I+      R++LA     EM+ KG+  +V  Y+ALI+G C+ R ++ A  LF ++ E G+
Sbjct: 611 INGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGL 670

Query: 660 LPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVE 719
            PN+  Y  +I+   +  N + AL  YK+M++  I  D  T++ L+   L +   V A +
Sbjct: 671 SPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASD 730

Query: 720 -YLESLTLG 727
            Y+E L+ G
Sbjct: 731 LYMEMLSKG 739



 Score =  275 bits (702), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 170/547 (31%), Positives = 286/547 (52%), Gaps = 39/547 (7%)

Query: 130 ILEILIESGLLRS-AYWVVETVVCVNMHGILDVL-IGGGLSSC---VSIKILDLLLLIYT 184
           +LE + E G + S A +    V CV    +++ L +   + +C   +++ +   L+  Y 
Sbjct: 277 LLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYC 336

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS-- 242
            +  ++  L +FNK+  +GL P+    + +I+   ++G   KA E+Y  M   GI PS  
Sbjct: 337 AQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVF 396

Query: 243 --------------------------------IVTYNTMLDSFCKEGEMQEALELLWEMQ 270
                                           I TYN M+   CK G+M EA  LL  M 
Sbjct: 397 NVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMV 456

Query: 271 GRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLV 330
            +G  PN V+YN +I G  R G ++ A  +  DML   LK +  +Y+ +I G  +KG   
Sbjct: 457 NQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSE 516

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
           +AL+L ++M++  +APT  T+N +I GLCK G++S+AR +    L +  IP  ++YN+++
Sbjct: 517 KALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIV 576

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
            G+ + GNI  A  ++ E+    + P VVTY +LI+G C+   +++A + ++ M  +G+ 
Sbjct: 577 DGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLE 636

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
            DV  Y+ +++G CK  ++  A++ F E+L  GL P+R  Y + I+G   L +   A   
Sbjct: 637 LDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVW 696

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
            ++M+    P DL TY  L+ GL K G L  A++L  +M+  G +PD IT+  +++    
Sbjct: 697 YKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCN 756

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
            G L   R +   M RK ++P+++ Y  LI  +   G L+ AF    EM  +G+ P+ +T
Sbjct: 757 KGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVT 816

Query: 631 YNALING 637
           Y+ LING
Sbjct: 817 YDILING 823



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 168/563 (29%), Positives = 274/563 (48%), Gaps = 36/563 (6%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           KK      L +  +M   G +P       +I      G  V+A  +   M   G   ++V
Sbjct: 267 KKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLV 326

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
              +++  +C +G +  AL L  ++   G  PN VTY+VLI G   +G +E+A  L   M
Sbjct: 327 VATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQM 386

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
              G+  S  + N ++ GY +  L  EA  L +E V  GVA  + TYNI++  LCK G++
Sbjct: 387 KLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKM 445

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG------------------------ 400
            +A      M+ + ++P+++SYN ++ G+CR GN+                         
Sbjct: 446 DEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSIL 505

Query: 401 -----------EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
                      +A  LFD++ S N+ PT  T+NT+I+GLC+ G +  A+   +N + +G 
Sbjct: 506 IDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGF 565

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
           +P  +TY  +V+G  K GN+  A   + EM   G+ P+   YT+ I G  K      A +
Sbjct: 566 IPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALK 625

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
            ++EM  KG   D+  Y+ L+ G CK   +E A +L  +++  G  P+ I Y S+I    
Sbjct: 626 TRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFR 685

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
           ++ ++      +  M+   +   L TYT LI      GRL  A   + EM  KGI P++I
Sbjct: 686 DLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDII 745

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           T++ L+NGLC   +++ A  +  +M+ + + P+   Y  LI      GN +EA  L+ EM
Sbjct: 746 TFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEM 805

Query: 690 LDREIEPDYCTHSALLLKQLDKD 712
           LDR + PD  T+  L+  +   D
Sbjct: 806 LDRGLVPDDVTYDILINGKFKGD 828



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 125/410 (30%), Positives = 218/410 (53%), Gaps = 5/410 (1%)

Query: 123 DEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLI 182
           DE V C +  I   + ++    W+ +         +LD ++  G+    ++   + ++L 
Sbjct: 419 DEAVDCGVANIFTYNIMMS---WLCKGGKMDEACSLLDNMVNQGMVP--NVVSYNDMILG 473

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + +K  ++    VF+ ML   L P+V   + +I      G S KA +++  M    I P+
Sbjct: 474 HCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPT 533

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             T+NT+++  CK G+M EA + L      G  P+ +TYN ++ GF + G ++ A  + R
Sbjct: 534 DFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYR 593

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M + G+  +  +Y  +I G+ +   +  AL   +EM  +G+   +  Y+ LI G CK  
Sbjct: 594 EMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRR 653

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            +  A+  FFE+L   + P+ I YN+++ G+    N+  A + + ++ +  +   + TY 
Sbjct: 654 DMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYT 713

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           TLIDGL + G L  A  L   M+++GI+PD+IT+ ++VNG C  G L  AR+   EM RK
Sbjct: 714 TLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRK 773

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
            + P    Y T IAG  + G+  EA+ L +EML +G  PD +TY++L++G
Sbjct: 774 NMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 823



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 94/181 (51%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K+  +E    +F ++L  GL P+    N +I   RD      A   Y+ M    I   
Sbjct: 649 FCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCD 708

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           + TY T++D   KEG +  A +L  EM  +G  P+ +T++VL+ G    G+LE AR ++ 
Sbjct: 709 LGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILE 768

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M +  +  S   YN +I GY  +G L EA  L +EM+ RG+ P   TY+ILI G  K  
Sbjct: 769 EMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGD 828

Query: 363 R 363
           R
Sbjct: 829 R 829


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  301 bits (771), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 154/472 (32%), Positives = 269/472 (56%)

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           KA  V   M +  + P +VT+N ++D+  + G++  A+ L+  M  +G  P  VT+N ++
Sbjct: 175 KADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVL 234

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            G  ++   ++A+ + R M +  +     S+N +I G+   G + EA+   +EM  RGV 
Sbjct: 235 KGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVT 294

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P + +++ LI      G++  A     EM    ++PD + Y  ++ G+CR+G++ EA  +
Sbjct: 295 PDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRV 354

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
            DE+     +P VVTYNTL++GLC+   L  A++L   M  +G+ PD+ T+T +++G C+
Sbjct: 355 RDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCR 414

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
            GN   A + F+ +L + L+PD  AY + I G  + GD ++A  L ++M A+   P+ +T
Sbjct: 415 DGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVT 474

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           Y++L+   C+ G +EEA   L +MV  G +P+ +TY SII      G++++G+     M+
Sbjct: 475 YSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMM 534

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
           +  + P L+T+  LIH +     +  AF  F+ M+ + ++P+ +TYN +ING      ++
Sbjct: 535 QDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNME 594

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           +A  +F  M   GI P++YTY  LIN +  AGN +EA +L+ EM+ R   PD
Sbjct: 595 EAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646



 Score =  296 bits (758), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 154/439 (35%), Positives = 243/439 (55%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V+  + + + M   GL P +   N ++K L  +    KA+EV+R M +  + P + ++N 
Sbjct: 208 VDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNI 267

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++  FC+ GE++EA++   EMQ RG +P+ V+++ LI  FS  G+++ A   +R+M  LG
Sbjct: 268 LIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLG 327

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           L      Y  +I G+   G + EAL + +EMV  G  P + TYN L+ GLCK  R+ DA 
Sbjct: 328 LVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAE 387

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               EM  + V PD+ ++ TL++GYCR GN  +A  LFD L  + L P VV YN+LIDG+
Sbjct: 388 ELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGM 447

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           CR GDL  A +L ++M  + I P+ +TY+I+++  C+ G +  A  F +EM+ KG  P+ 
Sbjct: 448 CRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNI 507

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             Y + I G  + G+  +  +  ++M+     PDLIT+N L+HG  K  ++  A  +   
Sbjct: 508 MTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNI 567

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M  +   PD +TY  II+   E G++     +F  M   G+ P   TY  LI+ H   G 
Sbjct: 568 MEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGN 627

Query: 609 LELAFMYFSEMQVKGIRPN 627
            + AF    EM  +G  P+
Sbjct: 628 SKEAFQLHDEMMHRGFAPD 646



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 193/380 (50%), Gaps = 37/380 (9%)

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
           W  +++  +R   +L  +   +  + N +++ YC+S    +A  +  E+  R + P VVT
Sbjct: 137 WPHLAEEAYRL--VLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVT 194

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           +N LID   R GD++ A  L ++M N+G+ P ++T+  ++ G CK      A+E F  M 
Sbjct: 195 HNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMD 254

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT--------------- 525
           +  + PD  ++   I G  ++G+  EA +  +EM  +G  PD+++               
Sbjct: 255 QCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMD 314

Query: 526 --------------------YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
                               Y +++ G C+ GS+ EA  +  +MVG G +PD +TY +++
Sbjct: 315 HAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLL 374

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
           +   +   L    +L N M  +G++P L T+T LIH +   G  E A   F  +  + +R
Sbjct: 375 NGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLR 434

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           P+V+ YN+LI+G+CR   + +A  L+ DM    I PN  TY+ILI+ +C  G  +EA   
Sbjct: 435 PDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGF 494

Query: 686 YKEMLDREIEPDYCTHSALL 705
             EM+ +   P+  T+++++
Sbjct: 495 LDEMVSKGNLPNIMTYNSII 514


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 188/643 (29%), Positives = 313/643 (48%), Gaps = 62/643 (9%)

Query: 75  NNRWVSDHFQAVVSDPELLVR-----VLNRIREKPRIALRFFRWVET-QPGVKRDEFVFC 128
           +N+W  ++ Q   S+ E+L       VL+RIR+   + L+FF WV   Q     + F + 
Sbjct: 41  HNQW-EENLQTRFSESEVLASDVAHLVLDRIRD-VELGLKFFDWVSRGQYSGPINGFAYS 98

Query: 129 TILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSM 188
           ++L++L  S +      V+E +    M    + +               +++  Y+   +
Sbjct: 99  SLLKLLARSRVFSEMEVVLENMRVEEMSPTREAM--------------SIVIQAYSDSGL 144

Query: 189 VEQCLLVFNKMLRN-GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF---------- 237
           VE+ L ++  +L+     PDV  CN ++ +L   G    AR++Y  M E           
Sbjct: 145 VEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDN 204

Query: 238 -----------------------------GIKPSIVTYNTMLDSFCKEGEMQEALELLWE 268
                                        G  P+I+ YNT++D +CK+G+M+ A  L  E
Sbjct: 205 YSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIE 264

Query: 269 MQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
           ++ +G  P   TY  +I GF + G+ +    L+ +M   GL V+   YN II    + G 
Sbjct: 265 LKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGH 324

Query: 329 LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNT 388
           +V+A+   E M+  G  P + TYN LI G C+ G+VS+A     + L K ++P+  SY  
Sbjct: 325 IVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTP 384

Query: 389 LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
           L++ YC+ G    A     E+  R   P +VTY  L+ GL   G+++VA  ++E M+ +G
Sbjct: 385 LIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERG 444

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
           + PD   Y I+++G CK   L  A+    EML + + PD F Y T + G ++ G+  EA 
Sbjct: 445 VFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEAR 504

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
           +L E  + KG  P ++ YN ++ G CK G +++A   + +M      PD  TY+++I   
Sbjct: 505 KLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGY 564

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
           ++  DL   + +F  M++    P +VTYT LI+    +G L  +   F EMQ  G+ PNV
Sbjct: 565 VKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNV 624

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
           +TY+ LI   C+  ++  A   F +M     +PN  T+  L+N
Sbjct: 625 VTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVN 667



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 140/510 (27%), Positives = 228/510 (44%), Gaps = 87/510 (17%)

Query: 198 KMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG 257
           +M   GL  +V+  N II     +G  VKA E    M E G KP IVTYNT++   C++G
Sbjct: 299 EMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDG 358

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
           ++ EA +LL +  G+G  PN  +Y  LI  + + G  ++A   + +M + G K    +Y 
Sbjct: 359 KVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYG 418

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            ++ G    G +  AL + E+M+ RGV P    YNIL+ GLCK  ++  A+    EML +
Sbjct: 419 ALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQ 478

Query: 378 NVIPD-----------------------------------IISYNTLLYGYCRSGNIGEA 402
           +V+PD                                   I+ YN ++ GYC+ G + +A
Sbjct: 479 SVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDA 538

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
               + ++ R+L P   TY+T+IDG  +  DL+ AQ++   M+     P+V+TYT ++NG
Sbjct: 539 MACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLING 598

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            C+ G+L  + + F EM   GL P+   Y+  I    K     +A    EEML     P+
Sbjct: 599 FCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPN 658

Query: 523 LITYNVLVHG-------------------------------------------------L 533
            +T+N LV+G                                                 L
Sbjct: 659 DVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICL 718

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
           C+ G    A +L  KM   G IPD +++ +++H     G  +  +++ +  L +      
Sbjct: 719 CQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSKEWKNIVSCNLNERELQIA 778

Query: 594 VTYTVLIHAHAARGRLELAFM---YFSEMQ 620
           V Y+ ++  +  +G  E + +    F E Q
Sbjct: 779 VNYSSILDQYLPQGTSEASVILQTMFEECQ 808



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 121/250 (48%), Gaps = 17/250 (6%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K+  ++    +F +M++    P+V     +I      G   ++ +++R M   G+ P+
Sbjct: 564 YVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPN 623

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG---------E 293
           +VTY+ ++ SFCKE ++ +A     EM    C PN VT+N L+ GFS+NG         E
Sbjct: 624 VVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNE 683

Query: 294 LEQAR-----GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
            ++ +          M+  G    + +YN I+    + G+   AL L  +M ++G  P  
Sbjct: 684 FQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDS 743

Query: 349 ATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL--- 405
            ++  L++G+C  GR  + ++     L +  +   ++Y+++L  Y   G    + +L   
Sbjct: 744 VSFVALLHGVCLEGRSKEWKNIVSCNLNERELQIAVNYSSILDQYLPQGTSEASVILQTM 803

Query: 406 FDELRSRNLV 415
           F+E +S + V
Sbjct: 804 FEECQSHSKV 813


>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1245

 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 190/629 (30%), Positives = 309/629 (49%), Gaps = 43/629 (6%)

Query: 105 RIALRFFRWVETQPGVKRDEFV--FCTILEILIESGLLRSAYWVVETVVCVNMHGILDVL 162
           ++AL+F +WV  QPG+  D  V  FC    IL+ + +   A  +++ +    M G    +
Sbjct: 51  KLALKFLKWVVKQPGLDTDHIVQLFCITTHILVRARMYDPARHILKELSL--MSGKSSFV 108

Query: 163 IGGGLSS---CVS-IKILDLLLLIYTKKSMVEQCLLVF---------------------- 196
            G  +++   C S   + D+L+ +Y ++ M++  L +F                      
Sbjct: 109 FGALMATYRLCNSNPSVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSI 168

Query: 197 -------------NKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
                         +ML+  + PDV   N +I VL   G   K+  + + M + G  P+I
Sbjct: 169 VKSCEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTI 228

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           VTYNT+L  +CK+G  + A+ELL  M  +G + +  TYN+LI    R+    +   L+RD
Sbjct: 229 VTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRD 288

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M K  +  +  +YN ++ G+S +G ++ A  L  EM+T G++P   T+N LI G    G 
Sbjct: 289 MRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGN 348

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
             +A   F  M  K +I   +SY  LL G C++     A   +  ++   +    +TY  
Sbjct: 349 FKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTG 408

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           +IDGLC+ G L+ A  +   M   GI PD++TY+ ++NG C++G L  A+E    + R G
Sbjct: 409 MIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVG 468

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           L P+   Y+T I    ++G   E  R+ E M+ +G  PD  T+NVLV  LCK G + EA 
Sbjct: 469 LSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAE 528

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
           E +R M  DG +P+ +++  +I+     G+  +   +F+ M + G  PT  TY  L+   
Sbjct: 529 EFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 588

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
              G L  A  +   +Q      + +  N LI  +C+   +D+A  LF +M +  ILP+ 
Sbjct: 589 CKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDS 648

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDR 692
           +TYT LI+  C  G    A+   KE   R
Sbjct: 649 FTYTSLISGLCRKGKTVIAILFAKEAEAR 677



 Score =  238 bits (607), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 164/576 (28%), Positives = 268/576 (46%), Gaps = 46/576 (7%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           +I   + +L  Y KK   +  + + + M   G+  DV   N +I  L  +  S K   + 
Sbjct: 227 TIVTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLL 286

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYN--------- 282
           R M +  I P+ VTYNT+L+ F  EG++  A +LL EM   G SPN VT+N         
Sbjct: 287 RDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISE 346

Query: 283 --------------------------VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSY 316
                                     VL+ G  +N E + ARG    M + G+ V   +Y
Sbjct: 347 GNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITY 406

Query: 317 NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
             +I G  + G L EA+ +  EM   G+ P + TY+ LI G C+ GR+  A+     + R
Sbjct: 407 TGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYR 466

Query: 377 KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
             + P+ I Y+TL+Y  CR G + E   +++ +      P   T+N L+  LC+ G +  
Sbjct: 467 VGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAE 526

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
           A++    M + GILP+ +++  ++NG    G    A   F+EM + G  P  F Y + + 
Sbjct: 527 AEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK 586

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
           G  K G    A +  + +       D +  N L+  +CK G+L++A  L  +MV    +P
Sbjct: 587 GLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILP 646

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNML------RKGLSPTLVTYTVLIHAHAARGRLE 610
           D  TYTS+I      G  R+G+ +   +       R  L P  V YT  +      G+ +
Sbjct: 647 DSFTYTSLIS-----GLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWK 701

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
             F +  +M   G+  +V+T NA+I+G  R+ +I++ + L  +M  +   PN  TY IL+
Sbjct: 702 AGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILL 761

Query: 671 NENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
           +      +   +  LY+ M+   I PD  T  +++L
Sbjct: 762 HGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIIL 797



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 138/488 (28%), Positives = 231/488 (47%), Gaps = 35/488 (7%)

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
           R C+ N   +++LI  + R G ++ +  + R M   G   S ++ N I+    +    V 
Sbjct: 117 RLCNSNPSVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVS 176

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
             +  +EM+ R + P +AT+NILI  LC  G    + +   +M +    P I++YNT+L+
Sbjct: 177 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLH 236

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
            YC+ G    A  L D +  + +   V TYN LI  LCR         L  +M  + I P
Sbjct: 237 WYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHP 296

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           + +TY  ++NG    G + +AR+  NEML  GL P+   +   I G +  G+  EA ++ 
Sbjct: 297 NEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMF 356

Query: 512 EEMLAKGFPPDLITYNVL-----------------------------------VHGLCKL 536
             M AKG     ++Y VL                                   + GLCK 
Sbjct: 357 HMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 416

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G L+EA  +L +M  DG  PD +TY+++I+    +G L+  +++   + R GLSP  + Y
Sbjct: 417 GFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIY 476

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
           + LI+     G L+     +  M ++G  P+  T+N L+  LC+  ++ +A      M  
Sbjct: 477 STLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS 536

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVH 716
           +GILPN  ++  LIN   ++G   +A  ++ EM      P + T+ +LL       + + 
Sbjct: 537 DGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIA 596

Query: 717 AVEYLESL 724
           A ++L+SL
Sbjct: 597 AEKFLKSL 604



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 147/611 (24%), Positives = 269/611 (44%), Gaps = 71/611 (11%)

Query: 185  KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
            K   +++ +++ N+M ++G+ PD+   + +I      G    A+E+   +   G+ P+ +
Sbjct: 415  KNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGI 474

Query: 245  TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
             Y+T++ + C+ G ++E + +   M   G +P+  T+NVL+T   + G++ +A   +R M
Sbjct: 475  IYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCM 534

Query: 305  LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY------------- 351
               G+  +A S++ +I GY   G  ++A ++ +EM   G  PT  TY             
Sbjct: 535  TSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHL 594

Query: 352  ----------------------NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTL 389
                                  N LI  +CK G +  A   F EM++++++PD  +Y +L
Sbjct: 595  IAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSL 654

Query: 390  LYGYCRSGNIGEAFLLFDELRSR-NLVPT------------------------------- 417
            + G CR G    A L   E  +R NLVP                                
Sbjct: 655  ISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLG 714

Query: 418  ----VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
                VVT N +IDG  R G +E    L   M NQ   P++ TY I+++G  K  ++S + 
Sbjct: 715  LTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSF 774

Query: 474  EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
              +  M+  G+ PD+    + I G  +        ++ +  + +G   D  T+N+L+   
Sbjct: 775  MLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKC 834

Query: 534  CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
            C  G +  A +++  M   G   D  T  +I+         +  R + + M ++G+SP  
Sbjct: 835  CANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPES 894

Query: 594  VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
              Y  L++     G ++ AF+   EM    I P  +  +A++  L +  + D+A  L   
Sbjct: 895  RKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRS 954

Query: 654  MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDY 713
            M +  ++P   ++T L++  C  GN  EAL L   M +  ++ D  +++ L+     K  
Sbjct: 955  MLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGD 1014

Query: 714  KVHAVEYLESL 724
               A E  E +
Sbjct: 1015 MAIAFELFEEM 1025



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 133/508 (26%), Positives = 240/508 (47%), Gaps = 36/508 (7%)

Query: 199  MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
            M  +G+LP+  + + +I     +G  +KA  V+  M + G  P+  TY ++L   CK G 
Sbjct: 534  MTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGH 593

Query: 259  MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
            +  A + L  +Q    + + V  N LIT   ++G L++A  L  +M++  +   + +Y  
Sbjct: 594  LIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTS 653

Query: 319  IICGYSEKGLLVEALNLEEEMVTRG-VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            +I G   KG  V A+   +E   RG + P    Y   + G+ K G+     +   +M + 
Sbjct: 654  LISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKL 713

Query: 378  NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
             +  D+++ N ++ GY R G I +   L  E+ ++N  P + TYN L+ G  +   +  +
Sbjct: 714  GLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTS 773

Query: 438  QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA- 496
              L  +MI  GILPD +T   ++ G C+   L +  +     + +G++ DR  +   I+ 
Sbjct: 774  FMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISK 833

Query: 497  ----GEL-----------KLG-----DTSEA--------YRLQE------EMLAKGFPPD 522
                GE+            LG     +T +A        +R QE      EM  +G  P+
Sbjct: 834  CCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPE 893

Query: 523  LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
               Y  L++GLC++G ++ A  +  +M+     P ++  ++++ A  + G       L  
Sbjct: 894  SRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLR 953

Query: 583  NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
            +ML+  L PT+ ++T L+H     G +  A      M   G++ ++++YN LI GLC   
Sbjct: 954  SMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKG 1013

Query: 643  RIDQAYGLFIDMEEEGILPNKYTYTILI 670
             +  A+ LF +M+ +G L N  TY  L+
Sbjct: 1014 DMAIAFELFEEMKRDGFLANVTTYKALV 1041



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 199/410 (48%)

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           ++ +I  Y  +G++ ++L +   M   G  P++ T N ++  + K            EML
Sbjct: 126 FDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWSFLKEML 185

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
           ++ + PD+ ++N L+   C  G+  ++  L  ++      PT+VTYNT++   C+ G  +
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 245

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            A +L ++M  +G+  DV TY ++++  C+    +       +M ++ + P+   Y T +
Sbjct: 246 AAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLL 305

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
            G    G    A +L  EML  G  P+ +T+N L+ G    G+ +EA ++   M   G I
Sbjct: 306 NGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLI 365

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
              ++Y  ++    +  +    R  +  M R G+    +TYT +I      G L+ A + 
Sbjct: 366 GTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVM 425

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
            +EM   GI P+++TY+ALING CR+ R+  A  +   +   G+ PN   Y+ LI   C 
Sbjct: 426 LNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCR 485

Query: 676 AGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
            G  +E +R+Y+ M+     PD+ T + L+           A E++  +T
Sbjct: 486 MGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 535



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 175/359 (48%), Gaps = 1/359 (0%)

Query: 232  RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
            + M + G+   +VT N M+D + + G++++  +LL+EM  +   PN  TYN+L+ G+S+ 
Sbjct: 708  QQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKR 767

Query: 292  GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
              +  +  L R M+  G+     +   II G  E  +L   L + +  + RGV     T+
Sbjct: 768  KHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTF 827

Query: 352  NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
            N+LI   C  G ++ A      M    +  D  + + ++    R+    E+ ++  E+  
Sbjct: 828  NMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSK 887

Query: 412  RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
            + + P    Y  L++GLCR GD++ A  +KE MI   I P  +  + MV    K G    
Sbjct: 888  QGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADE 947

Query: 472  AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
            A      ML+  L P   ++TT +    K G+ +EA  L+  M   G   DL++YNVL+ 
Sbjct: 948  ASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLIT 1007

Query: 532  GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD-LFNNMLRKGL 589
            GLC  G +  A EL  +M  DGF+ +  TY +++   L  G    G D +  ++L +G 
Sbjct: 1008 GLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGILSQGTEFSGTDIILKDLLARGF 1066



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 112/437 (25%), Positives = 184/437 (42%), Gaps = 36/437 (8%)

Query: 207  DVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELL 266
            D   CN +I  +  +G   KA  ++  M +  I P   TY +++   C++G+   A+   
Sbjct: 612  DTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFA 671

Query: 267  WEMQGRG-CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
             E + RG   PN V Y   + G  + G+ +      + M KLGL     + N +I GYS 
Sbjct: 672  KEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSR 731

Query: 326  KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
             G + +  +L  EM  +   P L TYNIL++G  K   VS +   +  M+   ++PD ++
Sbjct: 732  MGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLT 791

Query: 386  YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA-------- 437
              +++ G C S  +     +      R +     T+N LI   C  G++  A        
Sbjct: 792  CYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMT 851

Query: 438  ---------------------QQLKEN------MINQGILPDVITYTIMVNGSCKMGNLS 470
                                  + +E+      M  QGI P+   Y  ++NG C++G++ 
Sbjct: 852  SLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIK 911

Query: 471  MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
             A     EM+   + P   A +  +    K G   EA  L   ML     P + ++  L+
Sbjct: 912  TAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLM 971

Query: 531  HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
            H  CK G++ EA EL   M   G   D ++Y  +I      GD+    +LF  M R G  
Sbjct: 972  HLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFL 1031

Query: 591  PTLVTYTVLIHAHAARG 607
              + TY  L+    ++G
Sbjct: 1032 ANVTTYKALVGGILSQG 1048



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 113/231 (48%), Gaps = 2/231 (0%)

Query: 197  NKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKE 256
            N M   G+  D   C+ I+ VL  N    ++R V   M + GI P    Y  +L+  C+ 
Sbjct: 848  NVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRV 907

Query: 257  GEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSY 316
            G+++ A  +  EM      P  V  + ++   ++ G+ ++A  L+R MLK+ L  +  S+
Sbjct: 908  GDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASF 967

Query: 317  NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
              ++  + + G + EAL L   M   G+   L +YN+LI GLC  G ++ A   F EM R
Sbjct: 968  TTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKR 1027

Query: 377  KNVIPDIISYNTLLYGYCRSGN-IGEAFLLFDELRSRNLVPTVVTYNTLID 426
               + ++ +Y  L+ G    G       ++  +L +R  + T +++N +I+
Sbjct: 1028 DGFLANVTTYKALVGGILSQGTEFSGTDIILKDLLARGFI-TAMSFNHMIN 1077



 Score = 47.8 bits (112), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 31/131 (23%), Positives = 61/131 (46%)

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           + +LI  +   G ++ +   F  M + G  P+V T NA++  + +       +    +M 
Sbjct: 126 FDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWSFLKEML 185

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKV 715
           +  I P+  T+ ILIN  C  G+++++  L ++M      P   T++ +L     K    
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 245

Query: 716 HAVEYLESLTL 726
            A+E L+ + L
Sbjct: 246 AAIELLDHMNL 256


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  300 bits (769), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 191/604 (31%), Positives = 290/604 (48%), Gaps = 78/604 (12%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK-VLRDNGFSVKAREVYRM 233
           +LD+L+  Y K   V     V   M   GL P  + CN ++K +LR +   +    V+++
Sbjct: 177 VLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMEL----VWKL 232

Query: 234 MG---EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
            G     GI P + TY+T L++ CK  +   A ++  EM+ R C+ N VTYNV+I+G  R
Sbjct: 233 KGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCR 292

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
           +G +E+A G   +M+  GL   A +Y  ++ G  + G L EA  L +EM   G+ P +  
Sbjct: 293 SGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVV 352

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           Y  L+ G  K G+ ++A     EM+   V P+ I Y+ L+ G C+ G +G A  L +E+ 
Sbjct: 353 YATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMI 412

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
                P   TY+ L+ G  ++ D + A +L   M N GILP+  TY IM+NG C+ G   
Sbjct: 413 KVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESK 472

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            A     EM+ +GL+P+ F Y   I G  K G  S A    E M      PDL  YN L+
Sbjct: 473 EAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLI 532

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
            GL  +G +EEA E   ++   G +PD  TY+ +IH   +  +L +   L   ML  GL 
Sbjct: 533 KGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLK 592

Query: 591 PTLVTYTVLIHAH-----------------------------------AARGRLELAFMY 615
           P   TYT L+  +                                   +    +E+AFM 
Sbjct: 593 PNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMV 652

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE------------------ 657
            +E++  G+ P++  Y++LI+GLC++  +++A GL  +M +E                  
Sbjct: 653 LTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCR 712

Query: 658 -----------------GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
                            G+LPN  TYT LI+ NC  G+  +A  LYK+MLDR I PD   
Sbjct: 713 SGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFV 772

Query: 701 HSAL 704
           ++ L
Sbjct: 773 YNVL 776



 Score =  284 bits (727), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 158/508 (31%), Positives = 267/508 (52%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           +   VE+      +M+  GL PD      ++  L   G   +A+ +   M   G+KP++V
Sbjct: 292 RSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVV 351

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
            Y T++D F KEG+  EA ++L EM   G  PN + Y+ LI G  + G+L +A  L+ +M
Sbjct: 352 VYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEM 411

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           +K+G +    +Y+P++ G+ +      A  L  EM   G+ P   TY I+I GLC+ G  
Sbjct: 412 IKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGES 471

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            +A +   EM+ + + P+   Y  L+ G+ + G+I  A    + +   N++P +  YN+L
Sbjct: 472 KEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSL 531

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           I GL   G +E A++    +  +G++PD  TY+ +++G CK  NL  A +   +ML  GL
Sbjct: 532 IKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGL 591

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
           +P+   YT  + G  K  D  +   + + ML  G  PD   Y +++  L +  ++E A  
Sbjct: 592 KPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFM 651

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           +L ++  +G +PD   Y+S+I    +M D+ +   L + M ++GL P +V Y  LI    
Sbjct: 652 VLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFC 711

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
             G +  A   F  +  KG+ PN +TY ALI+G C+   I  A+ L+ DM + GI P+ +
Sbjct: 712 RSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAF 771

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDR 692
            Y +L     +A + ++AL L +EM +R
Sbjct: 772 VYNVLATGCSDAADLEQALFLTEEMFNR 799



 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 160/591 (27%), Positives = 292/591 (49%), Gaps = 15/591 (2%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G+  D F +  ++  L + G L+ A  +++ + C  +                ++ +   
Sbjct: 310 GLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLK--------------PNVVVYAT 355

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  + K+    +   + N+M+  G+ P+    + +I+ L   G   +A ++   M + G
Sbjct: 356 LVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVG 415

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
            +P   TY+ ++    +  +   A ELL EM+  G  PN  TY ++I G  +NGE ++A 
Sbjct: 416 HRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAG 475

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L+ +M+  GLK +A  Y P+I G+S++G +  A    E M    V P L  YN LI GL
Sbjct: 476 NLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGL 535

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
              GR+ +A   + ++ ++ ++PD  +Y+ L++GYC++ N+ +A  L  ++ +  L P  
Sbjct: 536 STVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNA 595

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
            TY  L++G  +  D E    + ++M+  G  PD   Y I++    +  N+ +A     E
Sbjct: 596 DTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTE 655

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           + + GL PD   Y++ I+G  K+ D  +A  L +EM  +G  P ++ YN L+ G C+ G 
Sbjct: 656 VEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGD 715

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           +  A  +   ++  G +P+ +TYT++I  + + GD+    DL+ +ML +G++P    Y V
Sbjct: 716 ISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNV 775

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           L    +    LE A     EM  +G   +V  ++ L+ G C+  R+ +   L   M +  
Sbjct: 776 LATGCSDAADLEQALFLTEEMFNRGY-AHVSLFSTLVRGFCKRGRLQETEKLLHVMMDRE 834

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQL 709
           I+PN  T   +I E   AG   EA R++ E+  ++         +LL   +
Sbjct: 835 IVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKKASQSSTDRFSLLFTDM 885



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 128/424 (30%), Positives = 221/424 (52%)

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
           +VL+  + +NG +  A  ++  M  LGL  +    N ++        +     L+  M  
Sbjct: 179 DVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEG 238

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
            G+ P + TY+  +   CK      A+  F EM R++   + ++YN ++ G CRSG + E
Sbjct: 239 AGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEE 298

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           AF   +E+    L P   TY  L++GLC+ G L+ A+ L + M   G+ P+V+ Y  +V+
Sbjct: 299 AFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVD 358

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
           G  K G  + A +  NEM+  G+QP++  Y   I G  K+G    A +L  EM+  G  P
Sbjct: 359 GFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRP 418

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           D  TY+ L+ G  +    + A ELL +M   G +P+  TY  +I+   + G+ +   +L 
Sbjct: 419 DTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLL 478

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
             M+ +GL P    Y  LI  H+  G + LA      M    + P++  YN+LI GL  +
Sbjct: 479 EEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTV 538

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
            RI++A   +  +++ G++P+++TY+ LI+  C   N ++A +L ++ML+  ++P+  T+
Sbjct: 539 GRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTY 598

Query: 702 SALL 705
           + LL
Sbjct: 599 TDLL 602



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/361 (31%), Positives = 176/361 (48%), Gaps = 5/361 (1%)

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
           SDAR           + D+     L+  Y ++G++  A  +   +    L PT    N L
Sbjct: 162 SDARSPSPSPSHSTAVLDV-----LVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGL 216

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           +  L R   +E+  +LK  M   GI PDV TY+  +   CK  +   A++ F EM R+  
Sbjct: 217 LKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDC 276

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
             +   Y   I+G  + G   EA+  +EEM+  G  PD  TY  L++GLCK G L+EA  
Sbjct: 277 AMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKA 336

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           LL +M   G  P+ + Y +++   ++ G      D+ N M+  G+ P  + Y  LI    
Sbjct: 337 LLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLC 396

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
             G+L  A    +EM   G RP+  TY+ L+ G  +    D A+ L  +M   GILPN Y
Sbjct: 397 KIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAY 456

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           TY I+IN  C  G  +EA  L +EM+   ++P+   ++ L++    + +   A E LE++
Sbjct: 457 TYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENM 516

Query: 725 T 725
           T
Sbjct: 517 T 517



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 124/458 (27%), Positives = 203/458 (44%), Gaps = 13/458 (2%)

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
           L+  +  + R   P+   +  L           QA GL+  M      + AH + P++  
Sbjct: 100 LDFFYWSRPRIAPPSADAFARLAASLCAASHFPQANGLLHQM------ILAHPHPPLVLA 153

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
             ++ +     + +    +   + + A  ++L+    K G V  A      M    + P 
Sbjct: 154 SIQRAIQ----DSDARSPSPSPSHSTAVLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPT 209

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
               N LL    R+  +   + L   +    + P V TY+T ++  C+  D + A+++ E
Sbjct: 210 RRCCNGLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFE 269

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            M  +    + +TY +M++G C+ G +  A  F  EM+  GL PD F Y   + G  K G
Sbjct: 270 EMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGG 329

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
              EA  L +EM   G  P+++ Y  LV G  K G   EA ++L +M+  G  P+ I Y 
Sbjct: 330 RLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYD 389

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
           ++I    ++G L R   L N M++ G  P   TY  L+  H      + AF   +EM+  
Sbjct: 390 NLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNS 449

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
           GI PN  TY  +INGLC+     +A  L  +M  EG+ PN + Y  LI  +   G+   A
Sbjct: 450 GILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLA 509

Query: 683 LRLYKEMLDREIEPD-YCTHSALLLKQLDKDYKVHAVE 719
               + M    + PD +C +S  L+K L    ++   E
Sbjct: 510 CESLENMTKANVLPDLFCYNS--LIKGLSTVGRIEEAE 545


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  300 bits (769), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 166/529 (31%), Positives = 274/529 (51%), Gaps = 38/529 (7%)

Query: 201 RNGLLPDVKNCNRIIKVLRDNGFSVK--AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           R G+ P ++  N ++  L  +  ++   + +V+R + E  + P+  T+N ++ + C +G 
Sbjct: 164 RRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGT 223

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           + +AL  L  MQG G SP+ VTYN L+    R G L +AR L+  M + G+  +  +YN 
Sbjct: 224 LADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNT 283

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR-K 377
           ++  ++  G + +A  + E M   G  P L TYN+L  GLC+ G+V +A     EM R  
Sbjct: 284 LVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLS 343

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
             +PD+++YNTL+    +     +A  L +E+R + + PT+VT+N ++  LC+ G LE A
Sbjct: 344 TALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEA 403

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ------------ 485
               E +  +G+ PDVITY  +++  CK GN++ A    +EM+ KGL+            
Sbjct: 404 LGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYN 463

Query: 486 -----------------------PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
                                  PD  +Y T +A   K  +   A RL ++M+ +   P 
Sbjct: 464 LCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPS 523

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
           + TYN L+ GLC++  L+EA + L ++V  G +PD  TY  IIHA  + GDL       N
Sbjct: 524 ISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHN 583

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
            M+     P +VT   L++     G+L+ A   F     KG + +VITYN LI  +C++ 
Sbjct: 584 KMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVG 643

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
            +D A   F DME +G+ P+ +TY ++++    AG  +EA  +  ++ D
Sbjct: 644 DVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLAD 692



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 150/506 (29%), Positives = 264/506 (52%), Gaps = 1/506 (0%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           +LL+  +  K  +   L   + M   GL PD    N ++      G   +AR +   M  
Sbjct: 212 NLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKR 271

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            GI P+  TYNT++ +F + G +++A +++  M   G  P+  TYNVL  G  + G++++
Sbjct: 272 DGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDE 331

Query: 297 ARGLIRDMLKLGLKV-SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
           A  L  +M +L   +    +YN ++    +     +AL L EEM  +GV PTL T+NI++
Sbjct: 332 AFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVV 391

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
             LCK G++ +A  +  ++  + + PD+I+YNTL+  YC++GN+ +AF L DE+  + L 
Sbjct: 392 KSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLK 451

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
               T NT++  LC+    E A++L  +   +G +PD ++Y  ++    K  N   A   
Sbjct: 452 MDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRL 511

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
           +++M+ + L P    Y T I G  ++    EA     E++ KG  PD  TYN+++H  CK
Sbjct: 512 WDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCK 571

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
            G LE A     KMV + F PD +T  ++++     G L +   LF + + KG    ++T
Sbjct: 572 EGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVIT 631

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           Y  LI +    G ++ A  +F +M+VKG++P+  TYN +++ L    R ++A+ +   + 
Sbjct: 632 YNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLA 691

Query: 656 EEGILPNKYTYTILINENCNAGNWQE 681
           + G L   +   +L   + +  + +E
Sbjct: 692 DSGKLSQSFACPLLKPSSADEADVKE 717



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 150/551 (27%), Positives = 252/551 (45%), Gaps = 39/551 (7%)

Query: 157 GILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK 216
             L  + G GLS        + LL  + +K M+ +   +  +M R+G+ P     N ++ 
Sbjct: 229 ATLSTMQGFGLSP--DAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVS 286

Query: 217 VLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA-------------- 262
                G+  +A +V   M  +G +P + TYN +    C+ G++ EA              
Sbjct: 287 AFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTAL 346

Query: 263 ----------------------LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
                                 L LL EM+ +G  P  VT+N+++    + G+LE+A G 
Sbjct: 347 PDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGK 406

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  + + GL     +YN +I  Y + G + +A  L +EMV +G+     T N ++Y LCK
Sbjct: 407 LEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCK 466

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
             R  DA        ++  +PD +SY T++  Y +  N   A  L+D++  R L+P++ T
Sbjct: 467 MKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSIST 526

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YNTLI GLCR   L+ A      ++ +G++PD  TY I+++  CK G+L  A  F N+M+
Sbjct: 527 YNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMV 586

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
               +PD     T + G    G   +A +L E  + KG   D+ITYN L+  +CK+G ++
Sbjct: 587 ENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVD 646

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
            A      M   G  PD  TY  ++ A  E G      ++ + +   G         +L 
Sbjct: 647 TALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLK 706

Query: 601 HAHAARGRL-ELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
            + A    + E      +E   K     + TY   +NGLC   ++ +A  +  +M ++G+
Sbjct: 707 PSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGM 766

Query: 660 LPNKYTYTILI 670
             +  TY  L+
Sbjct: 767 PVDSSTYITLM 777



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 133/505 (26%), Positives = 240/505 (47%), Gaps = 58/505 (11%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G+   +  + T++      G ++ A  VVE++        L       +  C + K+ + 
Sbjct: 273 GIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEA 332

Query: 179 LLL-------------IYTKKSMVEQC---------LLVFNKMLRNGLLPDVKNCNRIIK 216
             L             + T  ++V+ C         L +  +M   G+ P +   N ++K
Sbjct: 333 FRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVK 392

Query: 217 VLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSP 276
            L   G   +A      + E G+ P ++TYNT++D++CK G + +A  L+ EM G+G   
Sbjct: 393 SLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKM 452

Query: 277 NGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLE 336
           +  T N ++    +    E A  L+    + G      SY  ++  Y ++     AL L 
Sbjct: 453 DTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLW 512

Query: 337 EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS 396
           ++M+ R + P+++TYN LI GLC+  R+ +A  +  E++ K ++PD  +YN +++ YC+ 
Sbjct: 513 DQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKE 572

Query: 397 GNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
           G++  AF   +++   +  P VVT NTL++GLC +G L+ A +L E+ + +G   DVITY
Sbjct: 573 GDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITY 632

Query: 457 TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM-- 514
             ++   CK+G++  A  FF++M  KGLQPD F Y   ++   + G + EA+ +  ++  
Sbjct: 633 NTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLAD 692

Query: 515 ---LAKGFPPDLI-------------------------------TYNVLVHGLCKLGSLE 540
              L++ F   L+                               TY   ++GLC  G L+
Sbjct: 693 SGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLK 752

Query: 541 EANELLRKMVGDGFIPDHITYTSII 565
           EA  +L +M+  G   D  TY +++
Sbjct: 753 EAKAVLDEMMQKGMPVDSSTYITLM 777



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 199/453 (43%), Gaps = 80/453 (17%)

Query: 342 RGVAPTLATYNILIYGLCKWGRV--SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
           RGV P+L   N ++  L +        +   F  ++   + P+  ++N L++ +C  G +
Sbjct: 165 RGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTL 224

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
            +A      ++   L P  VTYNTL++  CR G L  A+ L   M   GI P   TY  +
Sbjct: 225 ADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTL 284

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM--LAK 517
           V+   ++G +  A +    M   G +PD   Y     G  + G   EA+RL++EM  L+ 
Sbjct: 285 VSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLST 344

Query: 518 GFPPDLITYNVLVHG-----------------------------------LCKLGSLEEA 542
             P D++TYN LV                                     LCK G LEEA
Sbjct: 345 ALP-DVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEA 403

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS------------ 590
              L K+  +G  PD ITY ++I A  + G++ +   L + M+ KGL             
Sbjct: 404 LGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYN 463

Query: 591 -----------------------PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
                                  P  V+Y  ++ A+      E A   + +M  + + P+
Sbjct: 464 LCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPS 523

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYK 687
           + TYN LI GLCR+ R+ +A     ++ E+G++P++ TY I+I+  C  G+ + A R + 
Sbjct: 524 ISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHN 583

Query: 688 EMLDREIEPDYCTHSAL-----LLKQLDKDYKV 715
           +M++   +PD  T + L     L  +LDK  K+
Sbjct: 584 KMVENSFKPDVVTCNTLMNGLCLHGKLDKALKL 616



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 152/358 (42%), Gaps = 36/358 (10%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  Y K   V +   + ++M+  GL  D    N ++  L        A E+     + G
Sbjct: 425 LIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRG 484

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
             P  V+Y T++ ++ KE   + AL L  +M  R   P+  TYN LI G  R   L++A 
Sbjct: 485 FVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAI 544

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
             + ++++ GL     +YN II  Y ++G L  A     +MV     P + T N L+ GL
Sbjct: 545 DKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGL 604

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C  G++  A   F   + K    D+I+YNTL+   C+ G++  A   FD++  + L P  
Sbjct: 605 CLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDA 664

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI------------------------ 454
            TYN ++  L   G  E A  +   + + G L                            
Sbjct: 665 FTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEA 724

Query: 455 ------------TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
                       TY   +NG C  G L  A+   +EM++KG+  D   Y T + G +K
Sbjct: 725 ESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIK 782



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 109/218 (50%), Gaps = 3/218 (1%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           ++++  Y K+  +E      NKM+ N   PDV  CN ++  L  +G   KA +++    E
Sbjct: 563 NIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVE 622

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G K  ++TYNT++ S CK G++  AL    +M+ +G  P+  TYNV+++  S  G  E+
Sbjct: 623 KGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEE 682

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYS--EKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           A  ++  +   G K+S     P++   S  E  +       E E   +     L TY   
Sbjct: 683 AHNMLHKLADSG-KLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMER 741

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
           + GLC  G++ +A+    EM++K +  D  +Y TL+ G
Sbjct: 742 LNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEG 779



 Score = 44.7 bits (104), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 2/142 (1%)

Query: 586 RKGLSPTLVTYTVLIHA--HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           R+G+ P+L     ++ A   +     + +   F  +    + PN  T+N L++  C    
Sbjct: 164 RRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGT 223

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSA 703
           +  A      M+  G+ P+  TY  L+N +C  G   EA  L   M    I P   T++ 
Sbjct: 224 LADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNT 283

Query: 704 LLLKQLDKDYKVHAVEYLESLT 725
           L+       +   A + +ES+T
Sbjct: 284 LVSAFARLGWIKQATKVVESMT 305


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  300 bits (769), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 175/541 (32%), Positives = 285/541 (52%), Gaps = 24/541 (4%)

Query: 203 GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           G +P V   N ++  L D   +  AR  +  M   G+ P++ TYN ++ + C  G  +EA
Sbjct: 151 GYVPSVLAYNAVLLALSDASLT-SARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
           L +L +M+G GC PN VTYN L+  F R GE++ A  L+  M + GLK +  ++N ++ G
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
             + G + +A  + +EMV  G+AP   +YN L+ G CK G   +A   F EM +K ++PD
Sbjct: 270 MCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 329

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
           ++++ +L++  C++GN+  A  L  ++R R L    VT+  LIDG C+ G L+ A     
Sbjct: 330 VVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 389

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            M    I P V+ Y  ++NG C +G +  ARE  +EM  KGL+PD   Y+T I+   K  
Sbjct: 390 GMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 449

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
           DT  A+ L ++ML KG  PD ITY+ L+  LC    L +A+ L + M+  G  PD  TYT
Sbjct: 450 DTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYT 509

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRL----ELAFMYFSE 618
           S+I    + G++     L + M++ G+ P +VTY+VLI+  +   R     +L F  + E
Sbjct: 510 SLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHE 569

Query: 619 MQVKGIRPNVITYNALIN---------------GLCRLRRIDQAYGLFIDMEEEGILPNK 663
             +    P    Y+AL++               G C    +++A  ++  M +     + 
Sbjct: 570 DPI----PANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDG 625

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLES 723
             Y++LI+ +C AGN  +AL  +K+ML     P+  +  +L+    +    V A + ++ 
Sbjct: 626 SVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQ 685

Query: 724 L 724
           L
Sbjct: 686 L 686



 Score =  263 bits (672), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 164/551 (29%), Positives = 263/551 (47%), Gaps = 50/551 (9%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
           F+ ML +G+ P+V   N +++ L   G   +A  + R M   G  P++VTYNT++ +F +
Sbjct: 178 FDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFR 237

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
            GE+  A  L+  M+  G  PN VT+N ++ G  + G++E AR +  +M++ GL     S
Sbjct: 238 AGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVS 297

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY------------------- 356
           YN ++ GY + G   EAL++  EM  +G+ P + T+  LI+                   
Sbjct: 298 YNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMR 357

Query: 357 ----------------GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
                           G CK G + DA      M +  + P ++ YN L+ GYC  G + 
Sbjct: 358 ERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMD 417

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           EA  L  E+ ++ L P VVTY+T+I   C+  D   A +L + M+ +G+LPD ITY+ ++
Sbjct: 418 EARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLI 477

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
              C    LS A   F  M++ GLQPD F YT+ I G  K G+   A  L ++M+  G  
Sbjct: 478 RVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVL 537

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM--------- 571
           PD++TY+VL++GL K     EA +LL K+  +  IP +  Y +++H   +          
Sbjct: 538 PDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALL 597

Query: 572 ------GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
                 G +     ++ +ML +  +     Y+VLIH H   G +  A  +  +M   G  
Sbjct: 598 KGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFA 657

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           PN  +  +LI GL     + +A  +   +     L +      LI+ N N GN    L +
Sbjct: 658 PNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDV 717

Query: 686 YKEMLDREIEP 696
              M    + P
Sbjct: 718 LHGMAKDGLLP 728



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 137/479 (28%), Positives = 233/479 (48%), Gaps = 15/479 (3%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           M   GL P++   N ++  +   G    AR+V+  M   G+ P  V+YNT++  +CK G 
Sbjct: 251 MREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGC 310

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
             EAL +  EM  +G  P+ VT+  LI    + G LE+A  L+R M + GL+++  ++  
Sbjct: 311 SHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTA 370

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           +I G+ +KG L +AL     M    + P++  YN LI G C  GR+ +AR    EM  K 
Sbjct: 371 LIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKG 430

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
           + PD+++Y+T++  YC++ +   AF L  ++  + ++P  +TY++LI  LC    L  A 
Sbjct: 431 LKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAH 490

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
            L +NMI  G+ PD  TYT +++G CK GN+  A    ++M++ G+ PD   Y+  I G 
Sbjct: 491 VLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGL 550

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH---------------GLCKLGSLEEAN 543
            K     EA +L  ++  +   P    Y+ L+H               G C  G + EA+
Sbjct: 551 SKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEAD 610

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
           ++ + M+   +  D   Y+ +IH     G++ +       ML+ G +P   +   LI   
Sbjct: 611 KVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGL 670

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
              G +  A     ++       +     ALI+       +D    +   M ++G+LP+
Sbjct: 671 FENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPS 729



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 97/407 (23%), Positives = 175/407 (42%), Gaps = 36/407 (8%)

Query: 116 TQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMH----------------GIL 159
           TQ G+  D   F +++ ++ ++G L  A  +V  +    +                 G L
Sbjct: 322 TQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFL 381

Query: 160 D--VLIGGGLSSC---VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRI 214
           D  +L   G+  C    S+   + L+  Y     +++   + ++M   GL PDV   + I
Sbjct: 382 DDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTI 441

Query: 215 IKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGC 274
           I     N  +  A E+ + M E G+ P  +TY++++   C E  + +A  L   M   G 
Sbjct: 442 ISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGL 501

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
            P+  TY  LI G  + G +E A  L   M+K G+     +Y+ +I G S+    +EA  
Sbjct: 502 QPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQ 561

Query: 335 LEEEMVTRGVAPTLATYNILIY---------------GLCKWGRVSDARHRFFEMLRKNV 379
           L  ++      P    Y+ L++               G C  G +++A   +  ML +N 
Sbjct: 562 LLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNW 621

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
             D   Y+ L++G+CR+GN+ +A     ++      P   +  +LI GL   G +  A Q
Sbjct: 622 NLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQ 681

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
           + + ++N   L D      +++ +   GN+    +  + M + GL P
Sbjct: 682 VIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLP 728


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  300 bits (769), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 153/435 (35%), Positives = 250/435 (57%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
            E  + + + M+  GL P +   N ++K L  +G   KA EV++ M +FG+ P + ++  
Sbjct: 146 AEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTI 205

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++  FC+ GE++EAL++  EM+ RG  P+ V+++ LI  F+R G+++ A   +R+M   G
Sbjct: 206 LIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFG 265

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           L      Y  +I G+   GL+ +AL + +EMV  G  P + TYN L+ GLCK  R+ DA 
Sbjct: 266 LVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAE 325

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               EM  + V PD+ ++ TL++GYC  G + +A  LFD + ++ L P +VTYNTLIDG+
Sbjct: 326 GLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGM 385

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           CR GDL+ A  L ++M ++ I P+ +TY+I+++  C+ G +  A  F +EM+ KG+ P+ 
Sbjct: 386 CRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNI 445

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             Y + I G  + G+ S+  +  ++M+     PDLITYN L+HG  K   + +A +LL  
Sbjct: 446 MTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNM 505

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M  +   PD +TY  +I+     G+++    +F  M  KG+ P   TY  +I+ H   G 
Sbjct: 506 MEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGN 565

Query: 609 LELAFMYFSEMQVKG 623
            + AF    EM  +G
Sbjct: 566 SKEAFQLHDEMLQRG 580



 Score =  296 bits (759), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 184/604 (30%), Positives = 299/604 (49%), Gaps = 44/604 (7%)

Query: 166 GLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSV 225
           G S     ++ DLL+  YT+     +    F  +L + +       N ++  L   G+  
Sbjct: 18  GSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPH 77

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
            A + YR++     + +  T N M+ ++CK  E  +   ++ EM+ R   P+ VT+NV++
Sbjct: 78  LAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMV 137

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
               R G+ E A  L+  M+  GLK    +YN ++ G    G+  +A  + +EM   GVA
Sbjct: 138 DARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVA 197

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P + ++ ILI G C+ G + +A   + EM  + + PD++S++ L+  + R G +  A   
Sbjct: 198 PDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAY 257

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
             E+R   LVP  V Y  +I G CR G +  A ++++ M+  G LPDV+TY  ++NG CK
Sbjct: 258 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 317

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
              L  A    NEM  +G+ PD   +TT I G    G   +A +L + ML +   PD++T
Sbjct: 318 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 377

Query: 526 YNVLVHGLCKLGSLEEANEL-----------------------------------LRKMV 550
           YN L+ G+C+ G L++AN+L                                   L +M+
Sbjct: 378 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 437

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
             G +P+ +TY SII      G++ +G+     M+   +SP L+TY  LIH +    ++ 
Sbjct: 438 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 497

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
            AF   + M+ + ++P+V+TYN LING      + +A  +F  M  +GI P++YTY  +I
Sbjct: 498 DAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMI 557

Query: 671 NENCNAGNWQEALRLYKEMLDREIEPDYCT---------HSALLLKQLDKDYKVHAVEYL 721
           N +  AGN +EA +L+ EML R  E              +SA  LKQ+  D KV    Y 
Sbjct: 558 NGHVTAGNSKEAFQLHDEMLQRGKEKRRAAGTVQFVNIQNSAESLKQMPMDLKVTCSIYF 617

Query: 722 ESLT 725
            + T
Sbjct: 618 FAKT 621



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/390 (30%), Positives = 201/390 (51%), Gaps = 19/390 (4%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNM--HGILDVLIG 164
           AL+ ++ +  + G+K D   F  ++ +    G +  A   +  + C  +   G++  ++ 
Sbjct: 219 ALKIYKEMRHR-GIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVI 277

Query: 165 GGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS 224
           GG                + +  ++   L V ++M+  G LPDV   N ++  L      
Sbjct: 278 GG----------------FCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRL 321

Query: 225 VKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVL 284
           + A  +   M E G+ P + T+ T++  +C EG++ +AL+L   M  +   P+ VTYN L
Sbjct: 322 LDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTL 381

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           I G  R G+L++A  L  DM    +  +  +Y+ +I  + EKG + +A    +EM+ +G+
Sbjct: 382 IDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGI 441

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
            P + TYN +I G C+ G VS  +    +M+   V PD+I+YNTL++GY +   + +AF 
Sbjct: 442 LPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFK 501

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
           L + +    + P VVTYN LI+G   +G+++ A  + E M  +GI PD  TY  M+NG  
Sbjct: 502 LLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHV 561

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
             GN   A +  +EML++G +  R A T Q
Sbjct: 562 TAGNSKEAFQLHDEMLQRGKEKRRAAGTVQ 591


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  300 bits (768), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 167/477 (35%), Positives = 253/477 (53%), Gaps = 15/477 (3%)

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           + P++ TYN ++  FC  GE+Q+ L    EM+  GC PN VTYN LI  + + G +++A 
Sbjct: 6   VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
           GL++ M   G++ +  SYN II G   +G + EA  + EEM  +G  P   TYN L+ G 
Sbjct: 66  GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 125

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           CK G    A     EM+R  V P +++Y  L+   C++ N+  A   FD++R R L P  
Sbjct: 126 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNE 185

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
            TY TLIDG  R G L  A ++   M   G  P V+TY   ++G C +  +  A     E
Sbjct: 186 RTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQE 245

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M+ KGL PD  +Y+T I+G  + G+   A+++++EM+ KG  PD +TY+ L+ GLC++  
Sbjct: 246 MVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRR 305

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           L EA +L ++M+  G  PD  TYT++I+A    GDL +   L + M+ KG  P  VTY+V
Sbjct: 306 LTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSV 365

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN---------------ALINGLCRLRR 643
           LI+    + R   A     ++  +   P+ +TY+               ALI G C    
Sbjct: 366 LINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGL 425

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
           + +A  +F  M E    P +  Y ++I+ +C  GN  +A  LYKEM+     P   T
Sbjct: 426 MHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVT 482



 Score =  279 bits (714), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 172/577 (29%), Positives = 293/577 (50%), Gaps = 24/577 (4%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           ++L+  +     +++ L  F +M RNG LP+V   N +I      G   +A  + + M  
Sbjct: 14  NILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSS 73

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G++P++++YN +++  C+EG M+EA E+L EM  +G +P+ VTYN L+ G+ + G   Q
Sbjct: 74  KGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQ 133

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  +  +M++ G+  S  +Y  +I    +   L  A+   ++M  RG+ P   TY  LI 
Sbjct: 134 ALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLID 193

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           G  + G +++A     EM      P +++YN  ++G+C    + EA  +  E+  + L P
Sbjct: 194 GFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAP 253

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
            VV+Y+T+I G CR G+L+ A Q+K+ M+ +G+ PD +TY+ ++ G C+M  L+ A +  
Sbjct: 254 DVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLS 313

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
            EML  GL PD F YTT I      GD ++A  L +EM+ KGF PD +TY+VL++GL K 
Sbjct: 314 QEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQ 373

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIH--ASLEM-------------GDLRRGRDLF 581
               EA  LL K++ +  +P  +TY ++I   +++E              G +     +F
Sbjct: 374 ARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVF 433

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
            +M+ +   P    Y V+IH H   G L  AF  + EM   G  P+ +T   LI  L + 
Sbjct: 434 ESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKE 493

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL---RLYKEM----LDREI 694
              ++   +  D      L       +L+  N   GN +  L   RLY ++    +   +
Sbjct: 494 GMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAVLNVSRLYNKLSLKCVASSV 553

Query: 695 EPDYCTHSA--LLLKQLDKDYKVHAVEYLESLTLGAE 729
            P   T ++  + L ++  ++   AV+    +  G E
Sbjct: 554 PPGALTQTSQKIFLSRIIANFDGTAVDGAAHVGEGGE 590



 Score =  271 bits (694), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 154/487 (31%), Positives = 255/487 (52%), Gaps = 15/487 (3%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           M+R+ + P+V   N +I+     G   K    +  M   G  P++VTYNT++D++CK G 
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           + EA  LL  M  +G  PN ++YNV+I G  R G +++A  ++ +M   G      +YN 
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           ++ GY ++G   +AL +  EMV  GV+P++ TY  LI  +CK   ++ A   F +M  + 
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
           + P+  +Y TL+ G+ R G + EA+ + +E+      P+VVTYN  I G C    +E A 
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 240

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
            + + M+ +G+ PDV++Y+ +++G C+ G L  A +   EM+ KG+ PD   Y++ I G 
Sbjct: 241 GVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGL 300

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
            ++   +EA  L +EML  G PPD  TY  L++  C  G L +A  L  +M+  GF+PD 
Sbjct: 301 CEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDA 360

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY---------------TVLIHAH 603
           +TY+ +I+   +    R  + L   ++ +   P+ VTY                 LI   
Sbjct: 361 VTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGF 420

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
             +G +  A   F  M  +  +P    YN +I+G CR   + +A+ L+ +M   G +P+ 
Sbjct: 421 CMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHT 480

Query: 664 YTYTILI 670
            T   LI
Sbjct: 481 VTVITLI 487



 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 145/402 (36%), Positives = 221/402 (54%)

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M++  +  + ++YN +I G+   G L + L    EM   G  P + TYN LI   CK GR
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           + +A      M  K + P++ISYN ++ G CR G++ EA+ + +E+  +   P  VTYNT
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           L++G C+ G+   A  +   M+  G+ P V+TYT ++N  CK  NL+ A EFF++M  +G
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           L+P+   YTT I G  + G  +EAYR+  EM   GF P ++TYN  +HG C L  +EEA 
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 240

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
            ++++MV  G  PD ++Y++II      G+L R   +   M+ KG+SP  VTY+ LI   
Sbjct: 241 GVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGL 300

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
               RL  A     EM   G+ P+  TY  LIN  C    +++A  L  +M  +G LP+ 
Sbjct: 301 CEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDA 360

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            TY++LIN        +EA RL  +++  E  P   T+  L+
Sbjct: 361 VTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLI 402



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 131/492 (26%), Positives = 212/492 (43%), Gaps = 114/492 (23%)

Query: 94  VRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCV 153
            R LNR       A+ FF  +  + G++ +E  + T+++     GLL  AY         
Sbjct: 163 ARNLNR-------AMEFFDQMRIR-GLRPNERTYTTLIDGFSRQGLLNEAYR-------- 206

Query: 154 NMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNR 213
               IL+ +   G S   S+   +  +  +     +E+ L V  +M+  GL PDV     
Sbjct: 207 ----ILNEMTESGFSP--SVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDV----- 255

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
                                         V+Y+T++  FC++GE+  A ++  EM  +G
Sbjct: 256 ------------------------------VSYSTIISGFCRKGELDRAFQMKQEMVEKG 285

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
            SP+ VTY+ LI G      L +A  L ++ML +GL     +Y  +I  Y  +G L +AL
Sbjct: 286 VSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKAL 345

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNT----- 388
           +L +EM+ +G  P   TY++LI GL K  R  +A+   F+++ +  +P  ++Y+T     
Sbjct: 346 HLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENC 405

Query: 389 ----------LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
                     L+ G+C  G + EA  +F+ +  RN  P    YN +I G CR G+L  A 
Sbjct: 406 SNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAF 465

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
            L + MI+ G +P  +T   ++         ++ +E  NE + +                
Sbjct: 466 NLYKEMIHSGFVPHTVTVITLIK--------ALFKEGMNEEMSE---------------- 501

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA-------NELLRKMVG 551
             +GDT  + RL E  LAK          VLV    K G++E         N+L  K V 
Sbjct: 502 -VIGDTLRSCRLNEAELAK----------VLVEINHKEGNMEAVLNVSRLYNKLSLKCVA 550

Query: 552 DGFIPDHITYTS 563
               P  +T TS
Sbjct: 551 SSVPPGALTQTS 562



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 57/171 (33%), Positives = 95/171 (55%)

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           P+  TY  +I     +G+L++G   F  M R G  P +VTY  LI A+   GR++ AF  
Sbjct: 8   PNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL 67

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
              M  KG++PN+I+YN +INGLCR   + +A+ +  +M  +G  P++ TY  L+N  C 
Sbjct: 68  LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCK 127

Query: 676 AGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
            GN+ +AL ++ EM+   + P   T++AL+           A+E+ + + +
Sbjct: 128 EGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRI 178


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  300 bits (768), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 163/530 (30%), Positives = 290/530 (54%), Gaps = 1/530 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V ++M+  G +P     + +++ LR  G  V A ++   + + G  PS+  YN +++S C
Sbjct: 318 VMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLC 377

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K+G+  EA  L  EM  +G   N VTY++LI  F R G+L+ A   +  M+  G+K++ +
Sbjct: 378 KDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVY 437

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
            YN +I G+ + G L  A++  +EM+ +G+ PT+ +Y  LI G C  G++ +A   + EM
Sbjct: 438 PYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEM 497

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
             K + P+  ++ TL+    R+  + +AF LFDE+  +N++P  VTYN +I+G C+ G+ 
Sbjct: 498 TGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNT 557

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
             A +L   M+ +G++PD  TY  +++  C  G +  A++F +++ R+  + +   Y+  
Sbjct: 558 VKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSAL 617

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           + G  K G   +A  +  EM+ +G   DL+ Y VL+ G  K         LL+ M     
Sbjct: 618 LHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRL 677

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            PD + YTS+I    + G +++   +++ M+ +G +P +VTYT LI+     G ++ A +
Sbjct: 678 RPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAEL 737

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            + EM V    PN +TY   ++ L R   +++A  L  DM  +G+L N  +Y IL+   C
Sbjct: 738 LWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDM-LKGLLANTVSYNILVRGFC 796

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
             G  +EA +L  EM+D  I PD  T+S ++ +   +     A+E+ +++
Sbjct: 797 KLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTM 846



 Score =  288 bits (738), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 176/589 (29%), Positives = 304/589 (51%), Gaps = 15/589 (2%)

Query: 117 QPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKIL 176
           Q G+   E  +CT++      GL +   + V         G++D +I  G     +   L
Sbjct: 289 QKGLTASEVTYCTLV-----LGLCKVQEFEVGA-------GVMDEMIELGFVP--TEAAL 334

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
             L+    +K  V     + N++ + G +P +   N +I  L  +G   +A  +++ MGE
Sbjct: 335 SSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGE 394

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G+  + VTY+ ++DSFC+ G++  A+  L +M   G       YN LI G  + G L  
Sbjct: 395 KGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSA 454

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A     +M+  GLK +  SY  +I GY  KG L EA  L  EM  +G+AP   T+  LI 
Sbjct: 455 AVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLIS 514

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
            L +  R++DA   F EML +N++P+ ++YN ++ G+C+ GN  +AF L +++  + LVP
Sbjct: 515 ALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVP 574

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
              TY  LI  LC  G +  A++  +++  +    + + Y+ +++G CK G L  A    
Sbjct: 575 DTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVC 634

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
            EM+++G+  D   Y   I G +K  DTS  + L + M  +   PD + Y  ++ G  K 
Sbjct: 635 REMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKA 694

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           GS+++A  +   M+ +G  P+ +TYT++I+   + G + +   L+  ML    +P  VTY
Sbjct: 695 GSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTY 754

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
              +   A  G +E A    ++M +KG+  N ++YN L+ G C+L R+++A  L  +M +
Sbjct: 755 CCFLDHLAREGSMEKAVQLHNDM-LKGLLANTVSYNILVRGFCKLGRVEEATKLLDEMID 813

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             I P+  TY+ +I + C  GN   A+  +  ML++ ++PD   ++ L+
Sbjct: 814 NAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLI 862



 Score =  279 bits (713), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 192/705 (27%), Positives = 330/705 (46%), Gaps = 86/705 (12%)

Query: 80  SDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGL 139
           +D F +    P  + +VL    +  R+ALRFF ++            FC ++  L+ + L
Sbjct: 61  NDPFISTKLKPHHVEKVLLLTLDDTRLALRFFNFLGLHKNFNHSTMSFCILIHALVNANL 120

Query: 140 LRSAYWVVETVVCVNMHGILDVL-IGGGLSSC------VSIKILDLLLLIYTKKSMVEQC 192
              A  +++T++   + G LD   +   L  C      +S    DLL+  Y ++  +   
Sbjct: 121 FWPASSLLQTLL---LRGGLDPREVFEALLDCFEKCDFISSLGFDLLIQSYVQEKRMFDS 177

Query: 193 LLVFNKMLRNGLLPDVKN----CNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI----- 243
           +L+F  M +  L+P V+      N + K+ R +   V   E+  M    GI+P I     
Sbjct: 178 VLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSM----GIRPDIYIYVA 233

Query: 244 ----------------------------VTYNTMLDSFCKEGEMQEALELLWEMQGRGCS 275
                                       V YN ++   CK   + EA+E+   +  +G +
Sbjct: 234 VIRSFCELKNFAKAKEMIQRMESSDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLT 293

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
            + VTY  L+ G  +  E E   G++ +M++LG   +  + + ++ G   KG +V+A +L
Sbjct: 294 ASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDL 353

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
              +   G  P+L  YN LI  LCK G+  +A   F EM  K +  + ++Y+ L+  +CR
Sbjct: 354 VNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCR 413

Query: 396 SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
            G +  A     ++    +  TV  YN+LI+G C+ G+L  A    + MI++G+ P V++
Sbjct: 414 RGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVS 473

Query: 456 YTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML 515
           YT +++G C  G L  A   ++EM  KG+ P+ + +TT I+   +    ++A+RL +EML
Sbjct: 474 YTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEML 533

Query: 516 AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLR 575
            +   P+ +TYNV++ G CK G+  +A ELL +MV  G +PD  TY  +I +    G + 
Sbjct: 534 EQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVC 593

Query: 576 RGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI----------- 624
             +   +++ R+      + Y+ L+H +   GRL  A     EM  +G+           
Sbjct: 594 EAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLI 653

Query: 625 ------------------------RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                                   RP+ + Y ++I+G  +   + +A+G++  M +EG  
Sbjct: 654 DGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCT 713

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           PN  TYT LINE C AG   +A  L+KEML     P++ T+   L
Sbjct: 714 PNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFL 758



 Score =  245 bits (625), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 146/506 (28%), Positives = 251/506 (49%), Gaps = 36/506 (7%)

Query: 170 CVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE 229
           C +     +L+  + ++  ++  +    KM+  G+   V   N +I      G    A  
Sbjct: 398 CANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVS 457

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
            +  M + G+KP++V+Y +++  +C +G++ EA  L  EM G+G +PN  T+  LI+   
Sbjct: 458 FFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALF 517

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           R   +  A  L  +ML+  +  +  +YN +I G+ ++G  V+A  L  +MV +G+ P   
Sbjct: 518 RANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTY 577

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA------- 402
           TY  LI  LC  GRV +A+    ++ R++   + + Y+ LL+GYC+ G + +A       
Sbjct: 578 TYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREM 637

Query: 403 ----------------------------FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
                                       F L   +  + L P  V Y ++IDG  + G +
Sbjct: 638 VKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSV 697

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A  + + MI++G  P+++TYT ++N  CK G +  A   + EML     P+   Y   
Sbjct: 698 KKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCF 757

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           +    + G   +A +L  +ML KG   + ++YN+LV G CKLG +EEA +LL +M+ +  
Sbjct: 758 LDHLAREGSMEKAVQLHNDML-KGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAI 816

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            PD ITY++II+     G+L    + ++ ML KGL P  + Y  LI+     G L  AF 
Sbjct: 817 FPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFE 876

Query: 615 YFSEMQVKGIRPNVITYNALINGLCR 640
              +M  +G++PN  T+ +L +G  R
Sbjct: 877 LRDDMIRRGVKPNQATHKSLSHGASR 902



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 221/444 (49%), Gaps = 2/444 (0%)

Query: 281 YNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV 340
           +++LI  + +   +  +  + R M +  L     +   ++ G ++   +   L L  E++
Sbjct: 161 FDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEIL 220

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
           + G+ P +  Y  +I   C+    + A+     M   ++  +++ YN L++G C++  + 
Sbjct: 221 SMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDL--NVVVYNVLIHGLCKNKRVW 278

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           EA  + + L  + L  + VTY TL+ GLC+  + EV   + + MI  G +P     + +V
Sbjct: 279 EAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLV 338

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
            G  + G +  A +  N + + G  P  F Y   I    K G   EA  L +EM  KG  
Sbjct: 339 EGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLC 398

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
            + +TY++L+   C+ G L+ A   L KM+  G       Y S+I+   ++G+L      
Sbjct: 399 ANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSF 458

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
           F+ M+ KGL PT+V+YT LI  +  +G+L  AF  + EM  KGI PN  T+  LI+ L R
Sbjct: 459 FDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFR 518

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
             R+  A+ LF +M E+ ++PN+ TY ++I  +C  GN  +A  L  +M+ + + PD  T
Sbjct: 519 ANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYT 578

Query: 701 HSALLLKQLDKDYKVHAVEYLESL 724
           +  L+           A ++++ L
Sbjct: 579 YRPLISSLCSTGRVCEAKKFIDDL 602



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 205/414 (49%), Gaps = 2/414 (0%)

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
           +S+  ++ +I  Y ++  + +++ +   M    + P + T   ++ GL K  RV      
Sbjct: 156 ISSLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVL 215

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
           F E+L   + PDI  Y  ++  +C   N  +A  +   + S +L   VV YN LI GLC+
Sbjct: 216 FGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDL--NVVVYNVLIHGLCK 273

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
              +  A ++K  +I +G+    +TY  +V G CK+    +     +EM+  G  P   A
Sbjct: 274 NKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAA 333

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
            ++ + G  + G   +A+ L   +   G  P L  YN L++ LCK G  +EA  L ++M 
Sbjct: 334 LSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMG 393

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
             G   + +TY+ +I +    G L         M+  G+  T+  Y  LI+ H   G L 
Sbjct: 394 EKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLS 453

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
            A  +F EM  KG++P V++Y +LI+G C   ++ +A+ L+ +M  +GI PN YT+T LI
Sbjct: 454 AAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLI 513

Query: 671 NENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           +    A    +A RL+ EML++ + P+  T++ ++     +   V A E L  +
Sbjct: 514 SALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQM 567



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/420 (29%), Positives = 211/420 (50%), Gaps = 21/420 (5%)

Query: 116 TQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNM---HGILDVLIGGGLSSCVS 172
           T  G+  + + F T++  L  +  +  A+ + + ++  NM       +V+I G      +
Sbjct: 498 TGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNT 557

Query: 173 IKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR 232
           +K  +LL                 N+M++ GL+PD      +I  L   G   +A++   
Sbjct: 558 VKAFELL-----------------NQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFID 600

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
            +     K + + Y+ +L  +CKEG +++AL +  EM  RG   + V Y VLI G  +  
Sbjct: 601 DLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQ 660

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
           +     GL+++M    L+     Y  +I GYS+ G + +A  + + M+  G  P + TY 
Sbjct: 661 DTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYT 720

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
            LI  LCK G +  A   + EML  N  P+ ++Y   L    R G++ +A  L +++  +
Sbjct: 721 TLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDML-K 779

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
            L+   V+YN L+ G C+ G +E A +L + MI+  I PD ITY+ ++   C+ GNL  A
Sbjct: 780 GLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGA 839

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
            EF++ ML KGL+PD  AY   I G    G+  +A+ L+++M+ +G  P+  T+  L HG
Sbjct: 840 IEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHG 899



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/327 (32%), Positives = 160/327 (48%), Gaps = 23/327 (7%)

Query: 121 KRDEFVFCTILEILIESGLLRSAYWVVETVV--CVNMHGIL-DVLIGGGLSSCVSIKILD 177
           K +E  +  +L    + G LR A  V   +V   V+M  +   VLI G +    +  +  
Sbjct: 608 KLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFG 667

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           LL      K+M +Q            L PD      +I      G   KA  ++ +M + 
Sbjct: 668 LL------KNMHDQ-----------RLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDE 710

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLW-EMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
           G  P+IVTY T+++  CK G M +A ELLW EM     +PN VTY   +   +R G +E+
Sbjct: 711 GCTPNIVTYTTLINELCKAGLMDKA-ELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEK 769

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  L  DMLK GL  +  SYN ++ G+ + G + EA  L +EM+   + P   TY+ +IY
Sbjct: 770 AVQLHNDMLK-GLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIY 828

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
             C+ G +  A   +  ML K + PD ++YN L+YG C +G +G+AF L D++  R + P
Sbjct: 829 QCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKP 888

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKEN 443
              T+ +L  G  R   +     + EN
Sbjct: 889 NQATHKSLSHGASRKFSISTHPVMPEN 915



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 154/292 (52%), Gaps = 1/292 (0%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL  Y K+  +   L V  +M++ G+  D+     +I        +     + + M +  
Sbjct: 617 LLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQR 676

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           ++P  V Y +M+D + K G +++A  +   M   GC+PN VTY  LI    + G +++A 
Sbjct: 677 LRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAE 736

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L ++ML      +  +Y   +   + +G + +A+ L  +M+ +G+     +YNIL+ G 
Sbjct: 737 LLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDML-KGLLANTVSYNILVRGF 795

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           CK GRV +A     EM+   + PD I+Y+T++Y  CR GN+  A   +D + ++ L P  
Sbjct: 796 CKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDT 855

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
           + YN LI G C  G+L  A +L+++MI +G+ P+  T+  + +G+ +  ++S
Sbjct: 856 LAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHGASRKFSIS 907


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  300 bits (767), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 181/582 (31%), Positives = 302/582 (51%), Gaps = 15/582 (2%)

Query: 112 RWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCV 171
           R + T      D  VF    ++L+E+GLL  A                D L+  G++  +
Sbjct: 27  RLIYTYKDWGSDPHVFDVFFQVLVEAGLLNEA------------RKFFDKLLNYGVA--L 72

Query: 172 SIKILDL-LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV 230
           S    +L L  + +K+ M+   L VF++  + G+  + ++ N ++  L   G   +A  +
Sbjct: 73  SAGSCNLYLTCLSSKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHL 132

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
              M   G  P +V+Y T++D +C  GE+Q+ ++L+ EMQ +G  PN  TY+ +I    +
Sbjct: 133 LMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCK 192

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
           +G++ +   ++R+M+K G+      Y  +I G+ + G    A  L  EM  R + P    
Sbjct: 193 SGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIA 252

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           ++ LI GL   G+V +A   F EM++K   PD ++Y  L+ GYC+ G + +AF L +++ 
Sbjct: 253 FSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMV 312

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
              L P VVTY  L DGLC+ G+L+ A +L   M  +G+  ++ TY  +VNG CK GN+ 
Sbjct: 313 QIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNIL 372

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            A +   EM   GL PD   YTT +    K G+  +A  L  EML +G  P ++T+NVL+
Sbjct: 373 QAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLM 432

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
           +GLC  G LE+   LL+ M+  G +P+  TY SI+       ++R   +++  M  +G+ 
Sbjct: 433 NGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVV 492

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           P   TY +LI  H     ++ A+    EM  K       +YNALI G  + +++ +A  L
Sbjct: 493 PDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQL 552

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
           F +M  EG++ +   Y + ++ N   GN +  L L  E +++
Sbjct: 553 FEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDEAIEK 594



 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 165/491 (33%), Positives = 267/491 (54%), Gaps = 1/491 (0%)

Query: 216 KVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEM-QEALELLWEMQGRGC 274
           +VL + G   +AR+ +  +  +G+  S  + N  L     + +M    L++  E    G 
Sbjct: 47  QVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSEFPQLGV 106

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
             N  +YN+L+    R G++ +A  L+  M   G      SY  II GY   G L + + 
Sbjct: 107 CWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQ 166

Query: 335 LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
           L +EM  +G+ P L TY+ +I  LCK G+V +      EM+++ V PD + Y TL+ G+C
Sbjct: 167 LVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFC 226

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
           + GN   A+ LF E+ +R +VP  + ++ LI GL   G +  A +L   MI +G  PD +
Sbjct: 227 KLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEV 286

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
           TYT +++G CK+G +  A    N+M++ GL P+   YT    G  K G+   A  L  EM
Sbjct: 287 TYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEM 346

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
             KG   ++ TYN +V+GLCK G++ +A +L+ +M   G  PD ITYT+++ A  + G++
Sbjct: 347 CRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEM 406

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
            + R+L   ML +GL PT+VT+ VL++     G+LE        M  KGI PN  TYN++
Sbjct: 407 VKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSI 466

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           +   C    +  +  ++  M  +G++P+  TY ILI  +C A N +EA  L+KEM+++  
Sbjct: 467 MKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRF 526

Query: 695 EPDYCTHSALL 705
                +++AL+
Sbjct: 527 NLTASSYNALI 537



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 129/436 (29%), Positives = 214/436 (49%), Gaps = 35/436 (8%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +++ + +  +M   GL P++   + II +L  +G  V+  +V R M + G+ P  V Y T
Sbjct: 161 LQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTT 220

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++D FCK G  Q A +L  EM+ R   P+ + ++ LI G S +G++ +A  L  +M+K G
Sbjct: 221 LIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKG 280

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPT--------------------- 347
            +    +Y  +I GY + G + +A  L  +MV  G+ P                      
Sbjct: 281 FEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTAN 340

Query: 348 --------------LATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
                         ++TYN ++ GLCK G +  A     EM    + PD I+Y TL+  Y
Sbjct: 341 ELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAY 400

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
            ++G + +A  L  E+  R L PTVVT+N L++GLC  G LE  ++L + M+ +GI+P+ 
Sbjct: 401 YKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNA 460

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
            TY  ++   C   N+ ++ E +  M  +G+ PD   Y   I G  K  +  EA+ L +E
Sbjct: 461 ATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKE 520

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           M+ K F     +YN L+ G  K   L EA +L  +M  +G +     Y   +  + E G+
Sbjct: 521 MVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGN 580

Query: 574 LRRGRDLFNNMLRKGL 589
           +    +L +  + K L
Sbjct: 581 METTLELCDEAIEKCL 596



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 115/358 (32%), Positives = 187/358 (52%), Gaps = 5/358 (1%)

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN---IGEAFLLFD 407
           +++    L + G +++AR  F ++L   V     S N  LY  C S     +G    +F 
Sbjct: 42  FDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCN--LYLTCLSSKRDMLGMVLKVFS 99

Query: 408 ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG 467
           E     +     +YN L++ L R G +  A  L   M  +G +PDV++YT +++G C +G
Sbjct: 100 EFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVG 159

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
            L    +   EM  KGL+P+ + Y++ I    K G   E  ++  EM+ +G  PD + Y 
Sbjct: 160 ELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYT 219

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
            L+ G CKLG+ + A +L  +M     +PD I ++++I      G +     LFN M++K
Sbjct: 220 TLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKK 279

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
           G  P  VTYT LI  +   G ++ AF   ++M   G+ PNV+TY AL +GLC+   +D A
Sbjct: 280 GFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTA 339

Query: 648 YGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             L  +M  +G+  N  TY  ++N  C AGN  +A++L +EM +  + PD  T++ L+
Sbjct: 340 NELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLM 397



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 136/256 (53%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           + ++M R GL  ++   N I+  L   G  ++A ++   M E G+ P  +TY T++D++ 
Sbjct: 342 LLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYY 401

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K GEM +A ELL EM  RG  P  VT+NVL+ G   +G+LE    L++ ML+ G+  +A 
Sbjct: 402 KTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAA 461

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +YN I+  Y  +  +  +  +   M  +GV P   TYNILI G CK   + +A     EM
Sbjct: 462 TYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEM 521

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           + K       SYN L+ G+ +   + EA  LF+E+R   LV +   YN  +D     G++
Sbjct: 522 VEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNM 581

Query: 435 EVAQQLKENMINQGIL 450
           E   +L +  I + +L
Sbjct: 582 ETTLELCDEAIEKCLL 597


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  300 bits (767), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 173/561 (30%), Positives = 286/561 (50%), Gaps = 16/561 (2%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +L+  +   S +   L  F K+ + GL PDV     ++  L  +    +A +++  +   
Sbjct: 121 ILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI--- 177

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
             +P ++T+ T+++  C+EG + EA+ LL  M   G  P+ +TY   + G  + G+   A
Sbjct: 178 -CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSA 236

Query: 298 RGLIRDMLKLG-LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
             L+R M ++  +K +   Y+ II G  + G   ++ NL  EM  +G+ P + TYN +I 
Sbjct: 237 LNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIG 296

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           G C  GR S A+    EML + + P++++YN L+  + + G   EA  L+DE+  R ++P
Sbjct: 297 GFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIP 356

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
             +TYN++IDG C+   L+ A+ +   M  +G  PDV T+T +++G C    +    E  
Sbjct: 357 NTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELL 416

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           +EM R+GL  +   Y T I G   +GD + A  L ++M++ G  PD++T N L+ GLC  
Sbjct: 417 HEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDN 476

Query: 537 GSLEEANELLRKMVG-----------DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           G L++A E+ + M             +G  PD +TY  +I   +  G      +L+  M 
Sbjct: 477 GKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMP 536

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
            +G+ P  +TY+ +I     + RL+ A   F  M  K   PNV+T+N LING C+  R+D
Sbjct: 537 HRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVD 596

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
               LF +M   GI+ +   Y  LI      GN   AL +++EM+   + PD  T   +L
Sbjct: 597 DGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 656

Query: 706 LKQLDKDYKVHAVEYLESLTL 726
                K+    AV  LE L +
Sbjct: 657 TGFWSKEELERAVAMLEDLQM 677



 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 167/560 (29%), Positives = 270/560 (48%), Gaps = 43/560 (7%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +E  + +F+ MLR+  LP V + N+++  +           +Y+ M    I+  I ++  
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI----------------------- 285
           ++  FC   ++  AL    ++   G  P+ VT+  L+                       
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPD 181

Query: 286 --------TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
                    G  R G + +A  L+  M++ GL+    +Y   + G  + G  V ALNL  
Sbjct: 182 VLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLR 241

Query: 338 EM-VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS 396
           +M     + P +  Y+ +I GLCK GR SD+ + F EM  K + P+I++YN ++ G+C S
Sbjct: 242 KMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCIS 301

Query: 397 GNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
           G    A  L  E+  R + P VVTYN LI+   + G    A +L + M+ +GI+P+ ITY
Sbjct: 302 GRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITY 361

Query: 457 TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA 516
             M++G CK   L  A + F  M  KG  PD F +TT I G        +   L  EM  
Sbjct: 362 NSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPR 421

Query: 517 KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
           +G   + +TYN L+HG C +G L  A +L ++M+  G  PD +T  +++    + G L+ 
Sbjct: 422 RGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKD 481

Query: 577 GRDLFNNMLRK-----------GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
             ++F  M +            G+ P ++TY +LI      G+   A   + EM  +GI 
Sbjct: 482 ALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIV 541

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           P+ ITY+++I+GLC+  R+D+A  +F+ M  +   PN  T+  LIN  C AG   + L L
Sbjct: 542 PDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLEL 601

Query: 686 YKEMLDREIEPDYCTHSALL 705
           + EM  R I  D   +  L+
Sbjct: 602 FCEMGRRGIVADAIIYITLI 621



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 145/478 (30%), Positives = 238/478 (49%), Gaps = 16/478 (3%)

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           +++A++L  +M      P+ + +N L+    R    +    L + M +  ++   +S+  
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           +I  +     L  AL+   ++   G+ P + T+  L++GLC   RVS+A   F ++ R  
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR-- 179

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
             PD++++ TL+ G CR G + EA  L D +    L P  +TY T +DG+C+ GD   A 
Sbjct: 180 --PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 439 QLKENMIN-QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
            L   M     I P+V+ Y+ +++G CK G  S +   F EM  KG+ P+   Y   I G
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
               G  S A RL +EML +   P+++TYN L++   K G   EA EL  +M+  G IP+
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 357

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
            ITY S+I    +   L    D+F  M  KG SP + T+T LI  +    R++       
Sbjct: 358 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 417

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
           EM  +G+  N +TYN LI+G C +  ++ A  L   M   G+ P+  T   L++  C+ G
Sbjct: 418 EMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 477

Query: 678 NWQEALRLYKEM------LDRE-----IEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
             ++AL ++K M      LD       +EPD  T++ L+   +++   + A E  E +
Sbjct: 478 KLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEM 535



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 129/277 (46%), Gaps = 32/277 (11%)

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
           +GS ++  L  A + F++MLR    P    +   +   +++        L ++M  K   
Sbjct: 54  SGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIR 113

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA------------- 567
            D+ ++ +L+   C    L  A     K+   G  PD +T+T+++H              
Sbjct: 114 CDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDL 173

Query: 568 -------------SLEMGDLRRGR-----DLFNNMLRKGLSPTLVTYTVLIHAHAARGRL 609
                        +L  G  R GR      L + M+  GL P  +TY   +      G  
Sbjct: 174 FHQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDT 233

Query: 610 ELAFMYFSEM-QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
             A     +M ++  I+PNV+ Y+A+I+GLC+  R   ++ LFI+M+++GI PN  TY  
Sbjct: 234 VSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNC 293

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +I   C +G W  A RL +EML+R+I P+  T++AL+
Sbjct: 294 MIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALI 330


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  300 bits (767), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 167/505 (33%), Positives = 276/505 (54%), Gaps = 15/505 (2%)

Query: 208 VKNCNRIIKVLRDNGFSVKAREVYR-MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELL 266
           V + N +++ L   G + +A E++R  M   G+ P+IVTYNT+++  CK  E+   +EL 
Sbjct: 45  VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELF 104

Query: 267 WEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEK 326
            E+  RG  P+ VTYN LI    + G+LE+AR L   M   G   +  +Y+ +I G  + 
Sbjct: 105 EELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKV 164

Query: 327 GLLVEALNLEEEMVTRG--VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK------N 378
           G + EA  L +EM  +   V P + TYN  + GLCK    ++A     E++R        
Sbjct: 165 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEA----CELMRSLRDGSLR 220

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
           V PD ++++TL+ G C+ G   EA    D++ +   VP VVTYN L++GLC+   +E A 
Sbjct: 221 VSPDTVTFSTLIDGLCKCGQTDEA--CNDDMIAGGYVPNVVTYNALVNGLCKADKMERAH 278

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
            + E+M+++G+ PDVITY+++V+  CK   +  A E  + M  +G  P+   + + I G 
Sbjct: 279 AMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGL 338

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
            K   + EA+++  ++  +   PD +T+N+L+ G CK G+ E+A+ L  +MV     PD 
Sbjct: 339 CKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDV 398

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
           +T+ ++I    + G +   RD+ + M   G+ P +VTY VL+H     GR+E    +  E
Sbjct: 399 MTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEE 458

Query: 619 MQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGN 678
           M   G  P  +TY +L+  LCR  R D A  L   ++  G  P+  TY IL++    +G 
Sbjct: 459 MVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGK 518

Query: 679 WQEALRLYKEMLDREIEPDYCTHSA 703
            ++A+ + +EM+ +  +PD  T +A
Sbjct: 519 TEQAITVLEEMVGKGHQPDSFTFAA 543



 Score =  291 bits (746), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 170/542 (31%), Positives = 270/542 (49%), Gaps = 38/542 (7%)

Query: 168 SSCVSIKILDLLLLIYTKKSMVEQCLLVF-NKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
           SS  S+   +++L    +     + L +F  +M R+G+ P +   N II  L  +     
Sbjct: 40  SSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGA 99

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
             E++  + + G  P +VTYNT++DS CK G+++EA  L   M  RGC PN VTY+VLI 
Sbjct: 100 GMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLIN 159

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAH--SYNPIICGYSEKGLLVEALNL--------- 335
           G  + G +++AR LI++M +    V  +  +YN  + G  ++ +  EA  L         
Sbjct: 160 GLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSL 219

Query: 336 --------------------------EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
                                      ++M+  G  P + TYN L+ GLCK  ++  A  
Sbjct: 220 RVSPDTVTFSTLIDGLCKCGQTDEACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHA 279

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
               M+ K V PD+I+Y+ L+  +C++  + EA  L   + SR   P VVT+N++IDGLC
Sbjct: 280 MIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLC 339

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
           +      A Q+   + N+ ++PD +T+ I++ G+CK GN   A   F EM+ K +QPD  
Sbjct: 340 KSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVM 399

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
            +   I G  K G    A  + + M   G PP+++TYNVLVHGLCK G +EE  E L +M
Sbjct: 400 TFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEM 459

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRL 609
           V  G +P+ +TY S+++A            L + +   G  P  VTY +L+      G+ 
Sbjct: 460 VSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKT 519

Query: 610 ELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL 669
           E A     EM  KG +P+  T+ A   GL R   +     L   +  +G+LP+  T + +
Sbjct: 520 EQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSI 579

Query: 670 IN 671
           ++
Sbjct: 580 LD 581



 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 132/369 (35%), Positives = 218/369 (59%), Gaps = 7/369 (1%)

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRF-FEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
           R  + ++A YNI++  LC+ G  + A   F  EM R  V P I++YNT++ G C+S  +G
Sbjct: 39  RSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELG 98

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
               LF+EL  R   P VVTYNTLID LC+ GDLE A++L   M ++G +P+V+TY++++
Sbjct: 99  AGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLI 158

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQ--PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           NG CK+G +  ARE   EM RK     P+   Y + + G  K   T+EA  L   +    
Sbjct: 159 NGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGS 218

Query: 519 F--PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
               PD +T++ L+ GLCK G  +EA      M+  G++P+ +TY ++++   +   + R
Sbjct: 219 LRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMER 276

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
              +  +M+ KG++P ++TY+VL+ A     R++ A      M  +G  PNV+T+N++I+
Sbjct: 277 AHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIID 336

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
           GLC+  R  +A+ + + +    ++P+K T+ ILI   C AGN+++A  L++EM+ + ++P
Sbjct: 337 GLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQP 396

Query: 697 DYCTHSALL 705
           D  T  AL+
Sbjct: 397 DVMTFGALI 405



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 160/539 (29%), Positives = 277/539 (51%), Gaps = 28/539 (5%)

Query: 87  VSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWV 146
           V+D  ++++ L R  E  R AL  FR    + GV      + TI+  L +S  L +   +
Sbjct: 45  VADYNIVLQSLCRAGETAR-ALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMEL 103

Query: 147 VETVV-------CVNMHGILDVL-----------IGGGLSS--CV-SIKILDLLLLIYTK 185
            E +V        V  + ++D L           + GG+SS  CV ++    +L+    K
Sbjct: 104 FEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCK 163

Query: 186 KSMVEQCLLVFNKMLRNG--LLPDVKNCNRIIKVLRDNGFSVKAREVYRMM--GEFGIKP 241
              +++   +  +M R    +LP++   N  +  L     + +A E+ R +  G   + P
Sbjct: 164 VGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSP 223

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
             VT++T++D  CK G+  EA     +M   G  PN VTYN L+ G  +  ++E+A  +I
Sbjct: 224 DTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMI 281

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
             M+  G+     +Y+ ++  + +   + EAL L   M +RG  P + T+N +I GLCK 
Sbjct: 282 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKS 341

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
            R  +A     ++  + ++PD +++N L+ G C++GN  +A  LF+E+ ++N+ P V+T+
Sbjct: 342 DRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTF 401

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
             LIDGLC+ G +E A+ + + M N G+ P+V+TY ++V+G CK G +    EF  EM+ 
Sbjct: 402 GALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVS 461

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
            G  P+   Y + +    +   T +A +L  ++ + G+ PD +TYN+LV GL K G  E+
Sbjct: 462 SGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQ 521

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           A  +L +MVG G  PD  T+ +        G+L    +L   +L KG+ P   T + ++
Sbjct: 522 AITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSIL 580



 Score = 46.2 bits (108), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 1/86 (1%)

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFI-DMEEEGILPNKYTYTILINENCNAGNW 679
           V+    +V  YN ++  LCR     +A  +F  +M  +G+ P   TY  +IN  C +   
Sbjct: 38  VRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNEL 97

Query: 680 QEALRLYKEMLDREIEPDYCTHSALL 705
              + L++E++ R   PD  T++ L+
Sbjct: 98  GAGMELFEELVKRGHHPDVVTYNTLI 123


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  300 bits (767), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 159/436 (36%), Positives = 246/436 (56%)

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M + G++P++VT+NT+L   C + ++ +A++L  EM   G  P+ +TY+ +I G  + G 
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
              A  L++ M + G K +  +YN II    +  L+ EA++   EMV  G+ P + TY+ 
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           +++G C  GRV++A   F +M+ +NVIP+ +++  L+ G C+   I EA+L+F+ +  + 
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           L P V TYN L+DG C    ++ AQ+L   M  +G  P+V +Y I++NG CK G +  A+
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
               EM  K L PD F Y+T + G  ++G   EA  L +EM + G  P+LITY++++ GL
Sbjct: 241 GLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGL 300

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
           CK G L+EA ELL+ M      P+   YT +I      G L   R+LF+N+  KG+ PT+
Sbjct: 301 CKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTV 360

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
           VTYTV+I      G    A   F EM V G  PN  TYN +I G  R      A  L  +
Sbjct: 361 VTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEE 420

Query: 654 MEEEGILPNKYTYTIL 669
           M  +G   +  T+ +L
Sbjct: 421 MVGKGFSADSSTFRML 436



 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 152/432 (35%), Positives = 235/432 (54%)

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA 332
           G  P  VT+N L++G     ++  A  L  +M+K+G +    +Y+ II G  + G    A
Sbjct: 5   GLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMA 64

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
           L L ++M  +G  P +  YN +I  LCK   V++A   F EM+++ + PD+ +Y+++L+G
Sbjct: 65  LQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHG 124

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
           +C  G + EA  LF ++  RN++P  VT+  LIDGLC+   +  A  + E M  +G+ PD
Sbjct: 125 FCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPD 184

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
           V TY  +V+G C    +  A++ FN M RKG  P+  +Y   I G  K G   EA  L  
Sbjct: 185 VYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLA 244

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           EM  K   PD+ TY+ L+ G C++G  +EA ELL++M   G +P+ ITY+ ++    + G
Sbjct: 245 EMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHG 304

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
            L    +L   M    + P +  YT+LI      G+LE A   FS + VKGI+P V+TY 
Sbjct: 305 HLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYT 364

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
            +I+GL +    ++A  LF +M   G LPN  TY ++I      G+   A+RL +EM+ +
Sbjct: 365 VMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGK 424

Query: 693 EIEPDYCTHSAL 704
               D  T   L
Sbjct: 425 GFSADSSTFRML 436



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 142/414 (34%), Positives = 228/414 (55%)

Query: 186 KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVT 245
           K+ +   + +F++M++ G  PDV   + II  L   G +  A ++ + M E G KP++V 
Sbjct: 23  KAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVA 82

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           YNT++DS CK+  + EA++   EM   G  P+  TY+ ++ GF   G + +A  L + M+
Sbjct: 83  YNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMV 142

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
           +  +  +  ++  +I G  +K ++ EA  + E M  +G+ P + TYN L+ G C   ++ 
Sbjct: 143 ERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMD 202

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
           +A+  F  M RK   P++ SYN L+ G+C+SG I EA  L  E+  ++L P + TY+TL+
Sbjct: 203 EAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLM 262

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
            G C+ G  + AQ+L + M + G+LP++ITY+I+++G CK G+L  A E    M    ++
Sbjct: 263 RGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIE 322

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           P+ F YT  I G    G    A  L   +  KG  P ++TY V++ GL K G   EA EL
Sbjct: 323 PNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACEL 382

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
            R+M  +G +P+  TY  II   L  GD      L   M+ KG S    T+ +L
Sbjct: 383 FREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRML 436



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 132/421 (31%), Positives = 224/421 (53%)

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M KLGL+ +  ++N ++ G   K  +++A+ L +EMV  G  P + TY+ +I GLCK G 
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
            + A     +M  K   P++++YNT++   C+   + EA   F E+    + P V TY++
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           ++ G C  G +  A  L + M+ + ++P+ +T+TI+++G CK   +S A   F  M  KG
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           L+PD + Y   + G        EA +L   M  KG  P++ +YN+L++G CK G ++EA 
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
            LL +M      PD  TY++++    ++G  +  ++L   M   GL P L+TY++++   
Sbjct: 241 GLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGL 300

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
              G L+ AF     MQ   I PN+  Y  LI G+C   +++ A  LF ++  +GI P  
Sbjct: 301 CKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTV 360

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLES 723
            TYT++I+     G   EA  L++EM      P+ CT++ ++   L      +AV  +E 
Sbjct: 361 VTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEE 420

Query: 724 L 724
           +
Sbjct: 421 M 421



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 140/436 (32%), Positives = 221/436 (50%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           M + GL P +   N ++  L      + A +++  M + G +P ++TY+T+++  CK G 
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
              AL+LL +M+ +GC PN V YN +I    ++  + +A     +M+K G+     +Y+ 
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           I+ G+   G + EA +L ++MV R V P   T+ ILI GLCK   +S+A   F  M  K 
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
           + PD+ +YN L+ GYC    + EA  LF+ +  +   P V +YN LI+G C+ G ++ A+
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
            L   M ++ + PD+ TY+ ++ G C++G    A+E   EM   GL P+   Y+  + G 
Sbjct: 241 GLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGL 300

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
            K G   EA+ L + M      P++  Y +L+ G+C  G LE A EL   +   G  P  
Sbjct: 301 CKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTV 360

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
           +TYT +I   L+ G      +LF  M   G  P   TY V+I      G    A     E
Sbjct: 361 VTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEE 420

Query: 619 MQVKGIRPNVITYNAL 634
           M  KG   +  T+  L
Sbjct: 421 MVGKGFSADSSTFRML 436



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 128/244 (52%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y  +S +++   +FN M R G  P+V++ N +I     +G   +A+ +   M    + P 
Sbjct: 195 YCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPD 254

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           I TY+T++  FC+ G  QEA ELL EM   G  PN +TY++++ G  ++G L++A  L++
Sbjct: 255 IFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLK 314

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M +  ++ +   Y  +I G    G L  A  L   +  +G+ PT+ TY ++I GL K G
Sbjct: 315 AMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGG 374

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
             ++A   F EM     +P+  +YN ++ G+ R+G+   A  L +E+  +       T+ 
Sbjct: 375 LSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFR 434

Query: 423 TLID 426
            L D
Sbjct: 435 MLSD 438



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 109/218 (50%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           +++  ++L+  + K   +++   +  +M    L PD+   + +++     G   +A+E+ 
Sbjct: 219 NVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELL 278

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
           + M  +G+ P+++TY+ +LD  CK G + EA ELL  MQ     PN   Y +LI G    
Sbjct: 279 KEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTF 338

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G+LE AR L  ++   G++ +  +Y  +I G  + GL  EA  L  EM   G  P   TY
Sbjct: 339 GKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTY 398

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTL 389
           N++I G  + G   +A     EM+ K    D  ++  L
Sbjct: 399 NVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRML 436


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  300 bits (767), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 158/534 (29%), Positives = 290/534 (54%), Gaps = 8/534 (1%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE----FGIKPSIVTYNTML 250
           +F +M+++  LP +   N+++  +      +K  ++   +GE      I   + +YN ++
Sbjct: 67  LFGEMVQSRPLPSIVEFNKLLSAIA----KMKKFDLVISLGERMQNLRISYDLYSYNILI 122

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
           + FC+  ++  AL +L +M   G  P+ VT + L+ G+  +  +  A  L+  M+++G K
Sbjct: 123 NCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 182

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
               ++N +I G        EA+ L ++MV RG  P L TY  ++ GLCK G +  A   
Sbjct: 183 PDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSL 242

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
             +M +  +  D++ YNT++ G C+  +I +AF LF+++ ++ + P V TYN+LI  LC 
Sbjct: 243 LKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCN 302

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
           YG    A +L  NMI + I P+V+T++ +++   K G L  A + ++EM+++ + PD F 
Sbjct: 303 YGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 362

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           Y++ I G        EA  + E M++K   P+++TYN L+ G CK   +EE  EL R+M 
Sbjct: 363 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS 422

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
             G + + +TY ++I    + GD    + +F  M+  G+ P ++TY++L+      G+LE
Sbjct: 423 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 482

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
            A + F  +Q   + P++ TYN +I G+C+  +++  + LF  +  +G+ PN   YT +I
Sbjct: 483 KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542

Query: 671 NENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           +  C  G  +EA  L++EM +    PD   ++ L+  +L    K  + E ++ +
Sbjct: 543 SGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEM 596



 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 159/502 (31%), Positives = 268/502 (53%), Gaps = 14/502 (2%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR-----EVY 231
           ++L+  + ++S +   L V  KM++ G  PD+   + ++     NG+    R      + 
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLL-----NGYCHSKRISDAVALV 173

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M E G KP  VT+NT++       +  EA+ L+ +M  RGC P+ VTY  ++ G  + 
Sbjct: 174 DQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKR 233

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G+++ A  L++ M K  ++     YN II G  +   + +A  L  +M T+G+ P + TY
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTY 293

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           N LI  LC +GR SDA      M+ + + P++++++ L+  + + G + EA  L+DE+  
Sbjct: 294 NSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           R++ P + TY++LI+G C +  L+ A+ + E MI++   P+V+TY  ++ G CK   +  
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
             E F EM ++GL  +   Y T I G  + GD   A ++ ++M++ G PPD+ITY++L+ 
Sbjct: 414 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           GLCK G LE+A  +   +      PD  TY  +I    + G +  G DLF ++  KG+ P
Sbjct: 474 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 533

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG-- 649
            ++ YT +I     +G  E A   F EM+  G  P+   YN LI    RLR  D+A    
Sbjct: 534 NVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRA--RLRDGDKAASAE 591

Query: 650 LFIDMEEEGILPNKYTYTILIN 671
           L  +M   G + +  T +++IN
Sbjct: 592 LIKEMRSCGFVGDASTISMVIN 613



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 139/435 (31%), Positives = 238/435 (54%), Gaps = 4/435 (0%)

Query: 180 LLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGI 239
           L ++ K S   + + + ++M++ G  PD+     ++  L   G    A  + + M +  I
Sbjct: 195 LFLHNKAS---EAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKI 251

Query: 240 KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
           +  +V YNT++D  CK   + +A  L  +M+ +G  P+  TYN LI+     G    A  
Sbjct: 252 EADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASR 311

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
           L+ +M++  +  +  +++ +I  + ++G LVEA  L +EM+ R + P + TY+ LI G C
Sbjct: 312 LLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
              R+ +A+H F  M+ K+  P++++YNTL+ G+C++  + E   LF E+  R LV   V
Sbjct: 372 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
           TYNTLI GL + GD ++AQ++ + M++ G+ PD+ITY+I+++G CK G L  A   F  +
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 491

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
            +  ++PD + Y   I G  K G   + + L   +  KG  P++I Y  ++ G C+ G  
Sbjct: 492 QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 551

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           EEA+ L R+M  DG +PD   Y ++I A L  GD     +L   M   G      T +++
Sbjct: 552 EEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMV 611

Query: 600 IHAHAARGRLELAFM 614
           I+     GRLE +++
Sbjct: 612 INM-LHDGRLEKSYL 625



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 135/448 (30%), Positives = 231/448 (51%)

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
           ++ +A+ L  EM      P+ V +N L++  ++  + +    L   M  L +    +SYN
Sbjct: 60  KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYN 119

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            +I  +  +  L  AL +  +M+  G  P + T + L+ G C   R+SDA     +M+  
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 179

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
              PD +++NTL++G        EA  L D++  R   P +VTY  +++GLC+ GD+++A
Sbjct: 180 GYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLA 239

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
             L + M    I  DV+ Y  +++G CK  ++  A   FN+M  KG++PD F Y + I+ 
Sbjct: 240 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISC 299

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
               G  S+A RL   M+ +   P+++T++ L+    K G L EA +L  +M+     PD
Sbjct: 300 LCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
             TY+S+I+       L   + +F  M+ K   P +VTY  LI       R+E     F 
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
           EM  +G+  N +TYN LI GL +    D A  +F  M  +G+ P+  TY+IL++  C  G
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479

Query: 678 NWQEALRLYKEMLDREIEPDYCTHSALL 705
             ++AL +++ +   ++EPD  T++ ++
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMI 507



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 132/415 (31%), Positives = 219/415 (52%)

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
           N +L+ A GL  +M++     S   +N ++   ++       ++L E M    ++  L +
Sbjct: 58  NLKLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYS 117

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           YNILI   C+  ++  A     +M++    PDI++ ++LL GYC S  I +A  L D++ 
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 177

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
                P  VT+NTLI GL  +     A  L + M+ +G  PD++TY  +VNG CK G++ 
Sbjct: 178 EMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDID 237

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
           +A     +M +  ++ D   Y T I G  K     +A+ L  +M  KG  PD+ TYN L+
Sbjct: 238 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLI 297

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
             LC  G   +A+ LL  M+     P+ +T++++I A ++ G L     L++ M+++ + 
Sbjct: 298 SCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           P + TY+ LI+      RL+ A   F  M  K   PNV+TYN LI G C+ +R+++   L
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           F +M + G++ N  TY  LI     AG+   A +++K+M+   + PD  T+S LL
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 472


>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 827

 Score =  299 bits (766), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 193/661 (29%), Positives = 318/661 (48%), Gaps = 46/661 (6%)

Query: 92  LLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVV 151
           L+ RV   +        +F  WVE   G       F  I+     +G+    + ++  +V
Sbjct: 161 LVSRVFKSLSWSVARKKKFGNWVECH-GFSHSISCFRIIVHAFALAGMRLEVWALLRDIV 219

Query: 152 CVNMHGILDV--LIGGGLSSCVSIK----ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLL 205
                   D   L    L S   ++    + D+L+ ++   SM+E  L VF+     GL 
Sbjct: 220 GFCNEAKYDTFELFSAFLDSPQHVERSGVVFDVLISVFASNSMLENALDVFSNAKHVGLE 279

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKE----GEMQE 261
           PD++ CN ++K L +       R V+  + + G  P+I TY  M++ +C +      M++
Sbjct: 280 PDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQ 339

Query: 262 ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC 321
           A  +L ++   G  P  VTY+  I G  + G +E A  LIR++      +++HS+N +I 
Sbjct: 340 AAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIY 399

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           G+ ++G + EAL + EEM + G+ P + +Y+ILI   C  G V        EM    + P
Sbjct: 400 GFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKP 459

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
            I+SY +L++G C+   +  A  +F  + + +       Y TLIDG C  GD++ A +L 
Sbjct: 460 SIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLL 519

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
           E MI   ++P   +   ++ G  K+G    A E FN MLR G+ PD  A    + G  + 
Sbjct: 520 EEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRA 579

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
           G   EA  L E+    GF  +  +YN +++ LCK G  E A ELL +M+    +P  + Y
Sbjct: 580 GYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNY 639

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI----HAH------------AA 605
           +++I    +  + +R  +LF  M++ G++  + TYT+L+    H+H              
Sbjct: 640 STLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKE 699

Query: 606 RG-------------------RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
           RG                    ++ A+  F EM  +G  PNVITY  +I+G C+  RID 
Sbjct: 700 RGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDL 759

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
           A  +F  M  + ++P+  TYT+LI+     G + +A +LY  M D+ + PD  TH+ L L
Sbjct: 760 ATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGVLPDDITHNVLGL 819

Query: 707 K 707
           K
Sbjct: 820 K 820



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 90/361 (24%), Positives = 166/361 (45%), Gaps = 11/361 (3%)

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
           S+A+H   E       PDI + N LL     +  +     +F+EL+ R   P + TY  +
Sbjct: 271 SNAKHVGLE-------PDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIM 323

Query: 425 IDGLCRY----GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           ++  C        +  A  +   +   G  P V+TY+  ++G CK+GN+  A      + 
Sbjct: 324 MNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLH 383

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
                 +  ++   I G  K G+  EA ++ EEM + G  PD+ +Y++L++  C  G + 
Sbjct: 384 YTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVM 443

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           +  +L+ +M      P  ++YTS+IH   +   L+   D+F+++           Y  LI
Sbjct: 444 KCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLI 503

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                +G ++ A     EM    + P   +  +LI G  +L   DQA  +F  M  +GI 
Sbjct: 504 DGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIW 563

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
           P+      +++ +C AG ++EAL L ++  +     +  +++A++ K   + Y   A+E 
Sbjct: 564 PDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALEL 623

Query: 721 L 721
           L
Sbjct: 624 L 624



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/373 (24%), Positives = 169/373 (45%), Gaps = 10/373 (2%)

Query: 362 GRVSDARHRFFEMLR------KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
           G  ++A++  FE+        ++V    + ++ L+  +  +  +  A  +F   +   L 
Sbjct: 220 GFCNEAKYDTFELFSAFLDSPQHVERSGVVFDVLISVFASNSMLENALDVFSNAKHVGLE 279

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM----GNLSM 471
           P + T N L+  L     +E  +++ E + ++G  P++ TYTIM+N  C        +  
Sbjct: 280 PDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQ 339

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A     ++ R G +P    Y+T I G  K+G+   A  L   +     P +  ++N +++
Sbjct: 340 AAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIY 399

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           G CK G + EA ++L +M   G +PD  +Y+ +I+A    GD+ +  DL   M    + P
Sbjct: 400 GFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKP 459

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
           ++V+YT LIH    +  L+ A   F  +     + +   Y  LI+G C    +D A  L 
Sbjct: 460 SIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLL 519

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDK 711
            +M    ++P  ++   LI      G + +AL ++  ML   I PD    + +L      
Sbjct: 520 EEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRA 579

Query: 712 DYKVHAVEYLESL 724
            Y   A+  LE  
Sbjct: 580 GYFKEALTLLEDF 592


>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 942

 Score =  299 bits (766), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 184/611 (30%), Positives = 313/611 (51%), Gaps = 7/611 (1%)

Query: 91  ELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSA--YWVVE 148
           EL+  VL  +R  P  +L FF+    QP  + D   +C I+ IL  + + +    Y    
Sbjct: 99  ELMDLVLRNLRLNPDASLEFFKLASKQPKFRPDVSSYCKIVHILSRARMYKEVRVYLNEL 158

Query: 149 TVVCVNMH---GILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLL 205
            V+C N +    + D L+        S  + D++L ++ +K M +  L VF+ M + G +
Sbjct: 159 VVLCKNNYIASAVWDELVSVYREFSFSPTVFDMILKVFAEKGMTKFALCVFDNMGKCGRV 218

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P +++CN ++  L  NG + KA  VY  M   GI P I +Y  M++++CKEG + EA   
Sbjct: 219 PSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNF 278

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           + EM+   C PN VTYN LI G+   G++  A+ ++  M + G+  ++ +Y  +I GY +
Sbjct: 279 VKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCK 338

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
           +G + +A  L   M+ + +      Y +LI+  C  GRV DA      ML+  +  + + 
Sbjct: 339 RGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVI 398

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
            N+L+ GYC+ G++ +A  +   ++  NL P    YNTL+DG C+  D   A +L + M 
Sbjct: 399 CNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMH 458

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
           N+G+   V+TY  ++     +G++  A   +N M ++G+ P+   Y T +    K+G   
Sbjct: 459 NKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFD 518

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
            A  + ++ L+KGF   +  YN ++ G CK+  L +A E+  KM   GF PD ITY ++I
Sbjct: 519 RAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLI 578

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
               ++G+L     L +   R G+S +   Y  LI        L+      +EM+ + + 
Sbjct: 579 DGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELS 638

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           PNV+TY +LI G C    +D+AY  +  M ++GI PN    + +++     G   EA  +
Sbjct: 639 PNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLI 698

Query: 686 YKEMLDREIEP 696
             ++ D  I+P
Sbjct: 699 LHQIAD--IDP 707



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 158/548 (28%), Positives = 264/548 (48%), Gaps = 35/548 (6%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +L+  Y     V+  L + + ML+ GL  +   CN +I      G   KA EV   M ++
Sbjct: 366 VLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDW 425

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
            +KP    YNT+LD FCK+ +  +A +L  EM  +G +   VTYN L+      G +E A
Sbjct: 426 NLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHA 485

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             +   M K G+  +  +Y  ++  + + G    A+ + ++ +++G   ++  YN +I G
Sbjct: 486 LHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICG 545

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
            CK  ++  A+  F +M      PD I+Y TL+ GYC+ GN+ EA  L D      +  +
Sbjct: 546 FCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSS 605

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
              YN+LI G+ R  +L+    L   M N+ + P+V+TY  ++ G C  G +  A   + 
Sbjct: 606 TEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYF 665

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEA---------------------------YRL 510
           +M+ KG+ P+    +  ++   + G   EA                             L
Sbjct: 666 KMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHL 725

Query: 511 QEEMLAKGFPPDL--------ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
           + + +   F            I YN+ + GLCK  ++++   +L  ++  GF PD+ TY 
Sbjct: 726 ETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYC 785

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
           S+IHA   +G +     L ++M+  GL P +V Y  LI+     G L+ A   F+++  K
Sbjct: 786 SLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARK 845

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
           G+ P V+TYN LI+G C+  R  +A  L   M EEGI P+  TY+ LI+     G  +++
Sbjct: 846 GLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQS 905

Query: 683 LRLYKEML 690
           + L  EM+
Sbjct: 906 VGLLNEMM 913



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 137/483 (28%), Positives = 234/483 (48%), Gaps = 5/483 (1%)

Query: 229 EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
            VYR   EF   P++  ++ +L  F ++G  + AL +   M   G  P+  + N L++  
Sbjct: 177 SVYR---EFSFSPTV--FDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNL 231

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
            +NGE  +A  +   M+ LG+     SY  ++  Y ++G + EA N  +EM      P +
Sbjct: 232 VQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNV 291

Query: 349 ATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDE 408
            TYN LI G    G V  A+     M  K +  +  +Y  L+ GYC+ G + +A  L   
Sbjct: 292 VTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGC 351

Query: 409 LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
           +  +NL      Y  LI   C  G ++ A ++++ M+  G+  + +    ++NG CK+G+
Sbjct: 352 MMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGH 411

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
           ++ A E    M    L+PD + Y T + G  K  D  +A++L +EM  KG    ++TYN 
Sbjct: 412 VNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNT 471

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           L+  L  +G +E A  +   M   G  P+ +TY +++ A  ++G   R   ++ + L KG
Sbjct: 472 LLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKG 531

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
            + ++  Y  +I       +L  A   F +M+  G  P+ ITY  LI+G C++  + +A 
Sbjct: 532 FTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEAL 591

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQ 708
            L    E +GI  +   Y  LI     +   Q+   L  EM +RE+ P+  T+ +L+   
Sbjct: 592 KLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGW 651

Query: 709 LDK 711
            DK
Sbjct: 652 CDK 654



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 124/410 (30%), Positives = 203/410 (49%), Gaps = 35/410 (8%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL  + K    ++ ++++   L  G    +   N +I         V+A+E++  M E G
Sbjct: 507 LLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELG 566

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
             P  +TY T++D +CK G + EAL+L    +  G S +   YN LITG  R+ EL++  
Sbjct: 567 FPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLN 626

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
           GL+ +M    L  +  +Y  +I G+ +KG++ +A N   +M+ +G+AP +   + ++  L
Sbjct: 627 GLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSL 686

Query: 359 CKWGRV---------------------------SDARH----RFFEMLRKNV----IPDI 383
            + G++                           SD RH    +  +   K      I + 
Sbjct: 687 YRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNN 746

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
           I YN  + G C+S NI +   +  +L  +   P   TY +LI      G +  A  L+++
Sbjct: 747 IVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDD 806

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           MIN G++P+++ Y  ++NG CK GNL  AR  FN++ RKGL P    Y T I G  K G 
Sbjct: 807 MINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGR 866

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
           T+EA  L+++M  +G  P  ITY+ L+HGL   G  E++  LL +M+  G
Sbjct: 867 TTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAG 916



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 96/379 (25%), Positives = 172/379 (45%), Gaps = 29/379 (7%)

Query: 366 DARHRFFEMLRKN--VIPDIISYNTLLY-------------------GYCRSGNIGEAFL 404
           DA   FF++  K     PD+ SY  +++                     C++  I  A  
Sbjct: 113 DASLEFFKLASKQPKFRPDVSSYCKIVHILSRARMYKEVRVYLNELVVLCKNNYIASA-- 170

Query: 405 LFDEL----RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           ++DEL    R  +  PTV  ++ ++      G  + A  + +NM   G +P + +   ++
Sbjct: 171 VWDELVSVYREFSFSPTV--FDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLL 228

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
           +   + G    A   + +M+  G+ PD F+YT  +    K G   EA+   +EM      
Sbjct: 229 SNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCE 288

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           P+++TYN L+ G   LG +  A ++L  M   G   +  TYT +I    + G + +   L
Sbjct: 289 PNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKL 348

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
              M+ K L      Y VLIHA+   GR++ A      M   G++ N +  N+LING C+
Sbjct: 349 IGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCK 408

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
           L  +++A  + + M++  + P+ Y Y  L++  C   ++ +A +L  EM ++ +     T
Sbjct: 409 LGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVT 468

Query: 701 HSALLLKQLDKDYKVHAVE 719
           ++ LL       +  HA+ 
Sbjct: 469 YNTLLKNLFHVGHVEHALH 487


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  299 bits (765), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 173/559 (30%), Positives = 285/559 (50%), Gaps = 16/559 (2%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +L+  +   S +   L  F K+ + GL PDV     ++  L  +    +A +++  +   
Sbjct: 121 ILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI--- 177

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
             +P ++T+ T+++  C+EG + EA+ LL  M   G  P+ +TY   + G  + G+   A
Sbjct: 178 -CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSA 236

Query: 298 RGLIRDMLKLG-LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
             L+R M ++  +K +   Y+ II G  + G   ++ NL  EM  +G+ P + TYN +I 
Sbjct: 237 LNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIG 296

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           G C  GR S A+    EML + + P++++YN L+  + + G   EA  L+DE+  R ++P
Sbjct: 297 GFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIP 356

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
             +TYN++IDG C+   L+ A+ +   M  +G  PDV T+T +++G C    +    E  
Sbjct: 357 NTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELL 416

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           +EM R+GL  +   Y T I G   +GD + A  L ++M++ G  PD++T N L+ GLC  
Sbjct: 417 HEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDN 476

Query: 537 GSLEEANELLRKMVG-----------DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           G L++A E+ + M             +G  PD +TY  +I   +  G      +L+  M 
Sbjct: 477 GKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMP 536

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
            +G+ P  +TY+ +I     + RL+ A   F  M  K   PNV+T+N LING C+  R+D
Sbjct: 537 HRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVD 596

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
               LF +M   GI+ +   Y  LI      GN   AL +++EM+   + PD  T   +L
Sbjct: 597 DGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 656

Query: 706 LKQLDKDYKVHAVEYLESL 724
                K+    AV  LE L
Sbjct: 657 TGFWSKEELERAVAMLEDL 675



 Score =  289 bits (739), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 159/483 (32%), Positives = 250/483 (51%), Gaps = 12/483 (2%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG-IKPSI 243
           ++  V + + + ++M+ NGL PD       +  +   G +V A  + R M E   IKP++
Sbjct: 194 REGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNV 253

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           V Y+ ++D  CK+G   ++  L  EMQ +G  PN VTYN +I GF  +G    A+ L+++
Sbjct: 254 VIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQE 313

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           ML+  +  +  +YN +I  + ++G   EA  L +EM+ RG+ P   TYN +I G CK  R
Sbjct: 314 MLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR 373

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           +  A   F+ M  K   PD+ ++ TL+ GYC +  I +   L  E+  R LV   VTYNT
Sbjct: 374 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 433

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK- 482
           LI G C  GDL  A  L + MI+ G+ PD++T   +++G C  G L  A E F  M +  
Sbjct: 434 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493

Query: 483 ----------GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
                     G++PD   Y   I G +  G   EA  L EEM  +G  PD ITY+ ++ G
Sbjct: 494 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           LCK   L+EA ++   M    F P+ +T+ ++I+   + G +  G +LF  M R+G+   
Sbjct: 554 LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 613

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
            + Y  LI+     G +  A   F EM   G+ P+ IT   ++ G      +++A  +  
Sbjct: 614 AIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLE 673

Query: 653 DME 655
           D++
Sbjct: 674 DLQ 676



 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 167/560 (29%), Positives = 270/560 (48%), Gaps = 43/560 (7%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +E  + +F+ MLR+  LP V + N+++  +           +Y+ M    I+  I ++  
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI----------------------- 285
           ++  FC   ++  AL    ++   G  P+ VT+  L+                       
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPD 181

Query: 286 --------TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
                    G  R G + +A  L+  M++ GL+    +Y   + G  + G  V ALNL  
Sbjct: 182 VLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLR 241

Query: 338 EM-VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS 396
           +M     + P +  Y+ +I GLCK GR SD+ + F EM  K + P+I++YN ++ G+C S
Sbjct: 242 KMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCIS 301

Query: 397 GNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
           G    A  L  E+  R + P VVTYN LI+   + G    A +L + M+ +GI+P+ ITY
Sbjct: 302 GRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITY 361

Query: 457 TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA 516
             M++G CK   L  A + F  M  KG  PD F +TT I G        +   L  EM  
Sbjct: 362 NSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPR 421

Query: 517 KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
           +G   + +TYN L+HG C +G L  A +L ++M+  G  PD +T  +++    + G L+ 
Sbjct: 422 RGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKD 481

Query: 577 GRDLFNNMLRK-----------GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
             ++F  M +            G+ P ++TY +LI      G+   A   + EM  +GI 
Sbjct: 482 ALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIV 541

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           P+ ITY+++I+GLC+  R+D+A  +F+ M  +   PN  T+  LIN  C AG   + L L
Sbjct: 542 PDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLEL 601

Query: 686 YKEMLDREIEPDYCTHSALL 705
           + EM  R I  D   +  L+
Sbjct: 602 FCEMGRRGIVADAIIYITLI 621



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 145/478 (30%), Positives = 238/478 (49%), Gaps = 16/478 (3%)

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           +++A++L  +M      P+ + +N L+    R    +    L + M +  ++   +S+  
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           +I  +     L  AL+   ++   G+ P + T+  L++GLC   RVS+A   F ++ R  
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR-- 179

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
             PD++++ TL+ G CR G + EA  L D +    L P  +TY T +DG+C+ GD   A 
Sbjct: 180 --PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 439 QLKENMIN-QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
            L   M     I P+V+ Y+ +++G CK G  S +   F EM  KG+ P+   Y   I G
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
               G  S A RL +EML +   P+++TYN L++   K G   EA EL  +M+  G IP+
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 357

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
            ITY S+I    +   L    D+F  M  KG SP + T+T LI  +    R++       
Sbjct: 358 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 417

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
           EM  +G+  N +TYN LI+G C +  ++ A  L   M   G+ P+  T   L++  C+ G
Sbjct: 418 EMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 477

Query: 678 NWQEALRLYKEM------LDRE-----IEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
             ++AL ++K M      LD       +EPD  T++ L+   +++   + A E  E +
Sbjct: 478 KLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEM 535



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/321 (30%), Positives = 159/321 (49%), Gaps = 21/321 (6%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR-----EVYRMMGEF 237
           + K+  ++    +F  M   G  PDV     +I     +G+    R     E+   M   
Sbjct: 368 FCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLI-----DGYCGAKRIDDGMELLHEMPRR 422

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G+  + VTYNT++  FC  G++  AL+L  +M   G  P+ VT N L+ G   NG+L+ A
Sbjct: 423 GLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDA 482

Query: 298 RGLIRDMLKLGLKVSAH-----------SYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
             + + M K  + + A            +YN +ICG   +G  +EA  L EEM  RG+ P
Sbjct: 483 LEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVP 542

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
              TY+ +I GLCK  R+ +A   F  M  K+  P+++++NTL+ GYC++G + +   LF
Sbjct: 543 DTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELF 602

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
            E+  R +V   + Y TLI G  + G++  A  + + MI+ G+ PD IT   M+ G    
Sbjct: 603 CEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSK 662

Query: 467 GNLSMAREFFNEMLRKGLQPD 487
             L  A     ++ R  L+ +
Sbjct: 663 EELERAVAMLEDLQRYQLEDE 683



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 129/277 (46%), Gaps = 32/277 (11%)

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
           +GS ++  L  A + F++MLR    P    +   +   +++        L ++M  K   
Sbjct: 54  SGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIR 113

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA------------- 567
            D+ ++ +L+   C    L  A     K+   G  PD +T+T+++H              
Sbjct: 114 CDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDL 173

Query: 568 -------------SLEMGDLRRGR-----DLFNNMLRKGLSPTLVTYTVLIHAHAARGRL 609
                        +L  G  R GR      L + M+  GL P  +TY   +      G  
Sbjct: 174 FHQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDT 233

Query: 610 ELAFMYFSEM-QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
             A     +M ++  I+PNV+ Y+A+I+GLC+  R   ++ LFI+M+++GI PN  TY  
Sbjct: 234 VSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNC 293

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +I   C +G W  A RL +EML+R+I P+  T++AL+
Sbjct: 294 MIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALI 330


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  299 bits (765), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 166/529 (31%), Positives = 273/529 (51%), Gaps = 38/529 (7%)

Query: 201 RNGLLPDVKNCNRIIKVLRDNGFSVK--AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           R G+ P ++  N ++  L  +  ++   + +V+R + E  + P+  T+N ++ + C +G 
Sbjct: 164 RRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGT 223

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           + +AL  L  MQG G SP+ VTYN L+    R G L +AR L+  M + G+  +  +YN 
Sbjct: 224 LADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNT 283

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR-K 377
           ++  ++  G + +A  + E M   G  P L TYN+L  GLC+ G+V +A     EM R  
Sbjct: 284 LVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLG 343

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
             +PD+++YNTL+    +     +A  L +E+R + + PT+VT+N ++  LC+ G LE A
Sbjct: 344 TALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEA 403

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ------------ 485
               E +  +G+ PDVITY  +++  CK GN++ A    +EM+ KGL+            
Sbjct: 404 LGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYN 463

Query: 486 -----------------------PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
                                  PD  +Y T +A   K  +   A RL ++M+ +   P 
Sbjct: 464 LCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPS 523

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
           + TYN L+ GLC++  L+EA + L + V  G +PD  TY  IIHA  + GDL       N
Sbjct: 524 ISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHN 583

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
            M+     P +VT   L++     G+L+ A   F     KG + +VITYN LI  +C++ 
Sbjct: 584 KMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVG 643

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
            +D A   F DME +G+ P+ +TY ++++    AG  +EA  +  ++ D
Sbjct: 644 DVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLAD 692



 Score =  265 bits (676), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 151/507 (29%), Positives = 264/507 (52%), Gaps = 1/507 (0%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
            +LL+  +  K  +   L   + M   GL PD    N ++      G   +AR +   M 
Sbjct: 211 FNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMK 270

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
             GI P+  TYNT++ +F + G +++A +++  M   G  P+  TYNVL  G  + G+++
Sbjct: 271 RDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVD 330

Query: 296 QARGLIRDMLKLGLKV-SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           +A  L  +M +LG  +    +YN ++    +     +AL L EEM  +GV PTL T+NI+
Sbjct: 331 EAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIV 390

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           +  LCK G++ +A  +  ++  + + PD+I+YNTL+  YC++GN+ +AF L DE+  + L
Sbjct: 391 VKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGL 450

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
                T NT++  LC+    E A++L  +   +G +PD ++Y  ++    K  N   A  
Sbjct: 451 KMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALR 510

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
            +++M+ + L P    Y T I G  ++    EA     E + KG  PD  TYN+++H  C
Sbjct: 511 LWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYC 570

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           K G LE A     KMV + F PD +T  ++++     G L +   LF + + KG    ++
Sbjct: 571 KEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVI 630

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           TY  LI +    G ++ A  +F +M+VKG++P+  TYN +++ L    R ++A+ +   +
Sbjct: 631 TYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKL 690

Query: 655 EEEGILPNKYTYTILINENCNAGNWQE 681
            + G L   +   +L   + +  + +E
Sbjct: 691 ADSGKLSQSFACPLLKPSSADEADVKE 717



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 150/551 (27%), Positives = 251/551 (45%), Gaps = 39/551 (7%)

Query: 157 GILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK 216
             L  + G GLS        + LL  + +K M+ +   +  +M R+G+ P     N ++ 
Sbjct: 229 ATLSTMQGFGLSP--DAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVS 286

Query: 217 VLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA-------------- 262
                G+  +A +V   M  +G +P + TYN +    C+ G++ EA              
Sbjct: 287 AFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTAL 346

Query: 263 ----------------------LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
                                 L LL EM+ +G  P  VT+N+++    + G+LE+A G 
Sbjct: 347 PDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGK 406

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  + + GL     +YN +I  Y + G + +A  L +EMV +G+     T N ++Y LCK
Sbjct: 407 LEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCK 466

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
             R  DA        ++  +PD +SY T++  Y +  N   A  L+D++  R L+P++ T
Sbjct: 467 MKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSIST 526

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YNTLI GLCR   L+ A       + +G++PD  TY I+++  CK G+L  A  F N+M+
Sbjct: 527 YNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMV 586

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
               +PD     T + G    G   +A +L E  + KG   D+ITYN L+  +CK+G ++
Sbjct: 587 ENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVD 646

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
            A      M   G  PD  TY  ++ A  E G      ++ + +   G         +L 
Sbjct: 647 TALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLK 706

Query: 601 HAHAARGRL-ELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
            + A    + E      +E   K     + TY   +NGLC   ++ +A  +  +M ++G+
Sbjct: 707 PSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGM 766

Query: 660 LPNKYTYTILI 670
             +  TY  L+
Sbjct: 767 PVDCSTYITLM 777



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 136/519 (26%), Positives = 246/519 (47%), Gaps = 86/519 (16%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G+   +  + T++      G ++ A  VVE++                      ++  ++
Sbjct: 273 GIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEP--------------DLRTYNV 318

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGL-LPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           L +   +   V++   + ++M R G  LPDV   N ++        S  A  +   M + 
Sbjct: 319 LAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDK 378

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G+KP++VT+N ++ S CKEG+++EAL  L ++   G +P+ +TYN LI  + + G + +A
Sbjct: 379 GVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKA 438

Query: 298 RGLIRDMLKLGLKVSAH-----------------------------------SYNPIICG 322
             L+ +M+  GLK+                                      SY  ++  
Sbjct: 439 FTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAA 498

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
           Y ++     AL L ++M+ R + P+++TYN LI GLC+  R+ +A  +  E + K ++PD
Sbjct: 499 YFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPD 558

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
             +YN +++ YC+ G++  AF   +++   +  P VVT NTL++GLC +G L+ A +L E
Sbjct: 559 ETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFE 618

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
           + + +G   DVITY  ++   CK+G++  A  FF++M  KGLQPD F Y   ++   + G
Sbjct: 619 SWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAG 678

Query: 503 DTSEAYRLQEEM-----LAKGFPPDLI-------------------------------TY 526
            + EA+ +  ++     L++ F   L+                               TY
Sbjct: 679 RSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETY 738

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
              ++GLC  G L+EA  +L +M+  G   D  TY +++
Sbjct: 739 MERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLM 777



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 151/358 (42%), Gaps = 36/358 (10%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  Y K   V +   + ++M+  GL  D    N ++  L        A E+     + G
Sbjct: 425 LIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRG 484

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
             P  V+Y T++ ++ KE   + AL L  +M  R   P+  TYN LI G  R   L++A 
Sbjct: 485 FVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAI 544

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
             + + ++ GL     +YN II  Y ++G L  A     +MV     P + T N L+ GL
Sbjct: 545 DKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGL 604

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C  G++  A   F   + K    D+I+YNTL+   C+ G++  A   FD++  + L P  
Sbjct: 605 CLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDA 664

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI------------------------ 454
            TYN ++  L   G  E A  +   + + G L                            
Sbjct: 665 FTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEA 724

Query: 455 ------------TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
                       TY   +NG C  G L  A+   +EM++KG+  D   Y T + G +K
Sbjct: 725 ESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIK 782



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 109/218 (50%), Gaps = 3/218 (1%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           ++++  Y K+  +E      NKM+ N   PDV  CN ++  L  +G   KA +++    E
Sbjct: 563 NIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVE 622

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G K  ++TYNT++ S CK G++  AL    +M+ +G  P+  TYNV+++  S  G  E+
Sbjct: 623 KGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEE 682

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYS--EKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           A  ++  +   G K+S     P++   S  E  +       E E   +     L TY   
Sbjct: 683 AHNMLHKLADSG-KLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMER 741

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
           + GLC  G++ +A+    EM++K +  D  +Y TL+ G
Sbjct: 742 LNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEG 779



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 68/128 (53%)

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           D+F +++   L P   T+ +L+H H ++G L  A    S MQ  G+ P+ +TYN L+N  
Sbjct: 194 DVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAH 253

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
           CR   + +A  L   M+ +GI P + TY  L++     G  ++A ++ + M     EPD 
Sbjct: 254 CRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDL 313

Query: 699 CTHSALLL 706
            T++ L +
Sbjct: 314 RTYNVLAM 321



 Score = 44.7 bits (104), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 2/142 (1%)

Query: 586 RKGLSPTLVTYTVLIHA--HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           R+G+ P+L     ++ A   +     + +   F  +    + PN  T+N L++  C    
Sbjct: 164 RRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGT 223

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSA 703
           +  A      M+  G+ P+  TY  L+N +C  G   EA  L   M    I P   T++ 
Sbjct: 224 LADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNT 283

Query: 704 LLLKQLDKDYKVHAVEYLESLT 725
           L+       +   A + +ES+T
Sbjct: 284 LVSAFARLGWIKQATKVVESMT 305


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  299 bits (765), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 163/475 (34%), Positives = 265/475 (55%), Gaps = 7/475 (1%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           M  +G  P+V   N +I  L  N    +A+E++  M      PS+VTYNT+LD   + G+
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH--SY 316
           ++ A+ L  EM  R  S + +++N+L+TG  R G++E A    R   K+  + S +  +Y
Sbjct: 61  LERAMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFR---KMDDRCSPNVITY 116

Query: 317 NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
           + +I G  +   + +A+ L E M  RG +P + TY IL+ GLCK  +V+ A     EML 
Sbjct: 117 SVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLD 176

Query: 377 KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
              +P++++YN+LL+G CR+  + +A  L  ++  R   P VVTY TLIDGLC+ G ++ 
Sbjct: 177 AGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKD 236

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
           A  +  +MI++G  PD++ Y +++NG CK   +  +       +  G++PD   Y++ I 
Sbjct: 237 ACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIY 296

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
           G  +     EA RL   + ++G PPD+I Y+ L+ GLCK G ++EA +L   M GDG   
Sbjct: 297 GLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDA 356

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
           D +TY+++I    + G +     L   M+R G  P+ +TY  LI        L+ A    
Sbjct: 357 DVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELV 416

Query: 617 SEMQVKGIRPNVITYNALINGLCRLRRIDQ-AYGLFIDMEEEGILPNKYTYTILI 670
            EM+     P+ +TYN LI+G+CR+ R+D  A   F +M + G++P+  TY+IL+
Sbjct: 417 EEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILL 471



 Score =  295 bits (754), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 170/492 (34%), Positives = 261/492 (53%), Gaps = 10/492 (2%)

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M + G +P++VTYN+++D  CK  E   A EL   M+   CSP+ VTYN L+ G  R G+
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 294 LEQARGLIRDMLKLGLKVSAH---SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
           LE+A  L ++ML       +H   S+N ++ G    G +  AL    +M  R  +P + T
Sbjct: 61  LERAMALFQEMLDR----RSHDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVIT 115

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           Y++LI GLCK  RVS A      M  +   PD+I+Y  L+ G C+   +  A+ +  E+ 
Sbjct: 116 YSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREML 175

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
               VP +VTYN+L+ GLCR   +  A  L  +M  +G  P+V+TY  +++G CK+G + 
Sbjct: 176 DAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVK 235

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            A     +M+ KG  PD   Y   I G  K     E+  L    ++ G  PD++TY+ ++
Sbjct: 236 DACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVI 295

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
           +GLC+   L+EA  LL  +   G  PD I Y+++I    + G +    DL+  M   G  
Sbjct: 296 YGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCD 355

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
             +VTY+ LI      GR++ A +  + M   G  P+ +TYN+LI GLC L  +D+A  L
Sbjct: 356 ADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIEL 415

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQE-ALRLYKEMLDREIEPDYCTHSALLLKQL 709
             +ME     P+  TY ILI+  C        AL  ++EM+D  + PD+ T+S +LL+ L
Sbjct: 416 VEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYS-ILLEGL 474

Query: 710 DKDYKVHAVEYL 721
            K   +H + +L
Sbjct: 475 KKSKDLHELRHL 486



 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 146/439 (33%), Positives = 231/439 (52%), Gaps = 4/439 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +E+ + +F +ML +    DV + N ++  L   G    A E +R M +    P+++TY+ 
Sbjct: 61  LERAMALFQEML-DRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSV 118

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++D  CK   + +A+ELL  M+ RGCSP+ +TY +L+ G  +  ++  A  ++R+ML  G
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
              +  +YN ++ G      + +AL L  +M  RG  P + TY  LI GLCK GRV DA 
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAC 238

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               +M+ K   PD++ YN L+ G C++  + E+  L     S  + P VVTY+++I GL
Sbjct: 239 AMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGL 298

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           CR   L+ A +L   + ++G  PDVI Y+ +++G CK G +  A + +  M   G   D 
Sbjct: 299 CRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADV 358

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             Y+T I G  K G   EA+ L   M+  G PP  +TYN L+ GLC L  L+EA EL+ +
Sbjct: 359 VTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEE 418

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGR-DLFNNMLRKGLSPTLVTYTVLIHA-HAAR 606
           M      P  +TY  +IH    M  +     D F  M+  G+ P  +TY++L+     ++
Sbjct: 419 MERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSK 478

Query: 607 GRLELAFMYFSEMQVKGIR 625
              EL  +   +M   G R
Sbjct: 479 DLHELRHLVLDQMVQLGYR 497



 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 145/456 (31%), Positives = 231/456 (50%), Gaps = 37/456 (8%)

Query: 269 MQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
           M+  GC PN VTYN LI G  +N E ++A+ L                            
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELF--------------------------- 33

Query: 329 LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNT 388
                   E M +   +P++ TYN L+ GL + G++  A   F EML +    D+IS+N 
Sbjct: 34  --------EHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRS-HDVISFNI 84

Query: 389 LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
           L+ G CR+G I  A   F ++  R   P V+TY+ LIDGLC+   +  A +L E+M  +G
Sbjct: 85  LVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSVLIDGLCKANRVSQAVELLESMKARG 143

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
             PDVITYTI+V+G CK   ++ A E   EML  G  P+   Y + + G  +    S+A 
Sbjct: 144 CSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDAL 203

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
            L  +M  +G  P+++TY  L+ GLCK+G +++A  +L  M+  G  PD + Y  +I+  
Sbjct: 204 ALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGL 263

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
            +   +     L    +  G+ P +VTY+ +I+      RL+ A      ++ +G  P+V
Sbjct: 264 CKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDV 323

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
           I Y+ LI+GLC+  ++D+A+ L+  M  +G   +  TY+ LI+  C AG   EA  L   
Sbjct: 324 ILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLAR 383

Query: 689 MLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           M+     P   T+++L+    D ++   A+E +E +
Sbjct: 384 MVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEM 419



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 125/372 (33%), Positives = 190/372 (51%), Gaps = 2/372 (0%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K + V Q + +   M   G  PDV     ++  L        A EV R M + G  P++V
Sbjct: 125 KANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLV 184

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TYN++L   C+   + +AL L+ +M  RGC+PN VTY  LI G  + G ++ A  ++ DM
Sbjct: 185 TYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADM 244

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           +  G       YN +I G  +   + E++ L    V+ G+ P + TY+ +IYGLC+  R+
Sbjct: 245 IDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRL 304

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            +A      +  +   PD+I Y+TL+ G C++G + EAF L++ +        VVTY+TL
Sbjct: 305 DEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTL 364

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           IDGLC+ G ++ A  L   M+  G  P  +TY  ++ G C + +L  A E   EM R   
Sbjct: 365 IDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNC 424

Query: 485 QPDRFAYTTQIAGELKLGDT-SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
            P    Y   I G  ++    S A    +EM+  G  PD ITY++L+ GL K   L E  
Sbjct: 425 APSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELR 484

Query: 544 EL-LRKMVGDGF 554
            L L +MV  G+
Sbjct: 485 HLVLDQMVQLGY 496


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  299 bits (765), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 176/557 (31%), Positives = 281/557 (50%), Gaps = 43/557 (7%)

Query: 167 LSSCVSIKILDLLLLIYTK---KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL-RDNG 222
           L +  S  + D  L  Y++     +  Q L    + +R  + P ++  N ++  L R   
Sbjct: 125 LGNLPSTPLADAALSAYSRLRLPHLAAQLLHSLRRRVR--VRPSLQAANAVLSALARSPS 182

Query: 223 FSVKAR-EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY 281
            S +A  + +R +    + P+  T+N ++ + C +G + +AL  L  MQG G SP+ VTY
Sbjct: 183 TSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTY 242

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
           N L+    R G L +AR L+  M K G+  +  +YN ++  Y+  G + +A  + E M  
Sbjct: 243 NTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTA 302

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR-KNVIPDIISYNTLLYGYCRSGNIG 400
            G  P L TYN+L  GLC+ G+V +A     EM R   ++PD+++YNTL     +     
Sbjct: 303 NGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSS 362

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           +A  L +E+R + +  T+VT+N +I GLC+ G+LE A      M + G+ PDVITY  ++
Sbjct: 363 DALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLI 422

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQ----------------------------------- 485
           +  CK GN++ A    +EM+R+GL+                                   
Sbjct: 423 HAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFM 482

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           PD  +Y T +A   K  ++  A RL +EM+ K   P + TYN L+ GL ++G L+EA + 
Sbjct: 483 PDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDK 542

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
           L +++  G +PD  TY  IIHA  + GDL       N M+     P +VT   L++    
Sbjct: 543 LNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCL 602

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
            G+L+ A   F     KG + +VITYN LI  +C+   +D A   F DME  G+ P+ +T
Sbjct: 603 NGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFT 662

Query: 666 YTILINENCNAGNWQEA 682
           Y ++++    AG  +EA
Sbjct: 663 YNVVLSALSEAGRTEEA 679



 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 166/566 (29%), Positives = 279/566 (49%), Gaps = 36/566 (6%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
            +LL+  +  K  +   L   + M   GL PD    N ++      G   +AR +   M 
Sbjct: 207 FNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMK 266

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
           + G+ P+  TYNT++ ++ + G +++A +++  M   G  P+  TYNVL  G  + G+++
Sbjct: 267 KDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVD 326

Query: 296 QARGLIRDMLKLG-LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           +A  L  +M +LG L     +YN +     +     +AL L EEM  +GV  TL T+NI+
Sbjct: 327 EAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIV 386

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           I GLCK G +  A     +M    + PD+I+YNTL++ +C++GNI +A+ L DE+  R L
Sbjct: 387 IKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGL 446

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
                T NT++  LC+    E AQ L ++   +G +PD ++Y  ++    K  N   A  
Sbjct: 447 KLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALR 506

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
            ++EM+ K L P    Y T I G  ++G   EA     E++ KG  PD  TYN+++H  C
Sbjct: 507 LWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYC 566

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           K G LE A +   KMV + F PD +T  ++++     G L +   LF + + KG    ++
Sbjct: 567 KEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVI 626

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           TY  LI      G ++ A  +F++M+ +G++P+  TYN +++ L    R ++A  +   +
Sbjct: 627 TYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKL 686

Query: 655 EEEGILPNKYT-----------------------------------YTILINENCNAGNW 679
            E G L   ++                                   YT L+N  C +G +
Sbjct: 687 AESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQF 746

Query: 680 QEALRLYKEMLDREIEPDYCTHSALL 705
           +EA  +  EM+ + +  D  T+  L+
Sbjct: 747 KEAKAILDEMMQKGMSVDSSTYITLM 772



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 154/511 (30%), Positives = 239/511 (46%), Gaps = 43/511 (8%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF- 237
           L+  Y +   ++Q   V   M  NG  PD+   N +   L   G   K  E +R+  E  
Sbjct: 280 LVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAG---KVDEAFRLKDEME 336

Query: 238 ---GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
               + P +VTYNT+ D+  K     +AL LL EM+ +G     VT+N++I G  ++GEL
Sbjct: 337 RLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGEL 396

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           E A G +  M   GL     +YN +I  + + G + +A  L +EMV RG+     T N +
Sbjct: 397 EGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTV 456

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           +Y LCK  R  +A+       ++  +PD +SY T++  Y +  N   A  L+DE+  + L
Sbjct: 457 LYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKL 516

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P++ TYNTLI GL R G L+ A      ++ +G++PD  TY I+++  CK G+L  A +
Sbjct: 517 TPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQ 576

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
           F N+M+    +PD     T + G    G   +A +L E  + KG   D+ITYN L+  +C
Sbjct: 577 FHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMC 636

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG------ 588
           K G ++ A      M   G  PD  TY  ++ A  E G     +++ + +   G      
Sbjct: 637 KDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSF 696

Query: 589 ----LSPTLV-------------------------TYTVLIHAHAARGRLELAFMYFSEM 619
               L P+ V                          YT L++     G+ + A     EM
Sbjct: 697 SSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEM 756

Query: 620 QVKGIRPNVITYNALINGLC-RLRRIDQAYG 649
             KG+  +  TY  L+ GL  R +R+  A G
Sbjct: 757 MQKGMSVDSSTYITLMEGLVKRQKRLTHAVG 787



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/386 (25%), Positives = 170/386 (44%), Gaps = 22/386 (5%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G+  D   + T++    ++G +  AY             ++D ++  GL   +    L+ 
Sbjct: 410 GLAPDVITYNTLIHAHCKAGNIAKAYT------------LMDEMVRRGLK--LDTFTLNT 455

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           +L    K+   E+   +     + G +PD  +   ++        S  A  ++  M E  
Sbjct: 456 VLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKK 515

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           + PSI TYNT++    + G ++EA++ L E+  +G  P+  TYN++I  + + G+LE A 
Sbjct: 516 LTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAF 575

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
                M++   K    + N ++ G    G L +AL L E  V +G    + TYN LI  +
Sbjct: 576 QFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTM 635

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           CK G V  A H F +M  + + PD  +YN +L     +G   EA  +  +L     +   
Sbjct: 636 CKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQS 695

Query: 419 VTYNTL----IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            +   L    +D      D +  ++  EN  +         YT +VNG C  G    A+ 
Sbjct: 696 FSSPLLKPSSVDEAESGKDAKTEEETVENPQDSA----SEAYTKLVNGLCTSGQFKEAKA 751

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELK 500
             +EM++KG+  D   Y T + G +K
Sbjct: 752 ILDEMMQKGMSVDSSTYITLMEGLVK 777



 Score = 42.4 bits (98), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 45/102 (44%)

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
           + PN  T+N L++  C    +  A      M+  G+ P+  TY  L+N +C  G   EA 
Sbjct: 200 LHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEAR 259

Query: 684 RLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
            L   M    + P   T++ L+       +   A + +E++T
Sbjct: 260 ALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMT 301


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  299 bits (765), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 181/624 (29%), Positives = 307/624 (49%), Gaps = 18/624 (2%)

Query: 104 PRIALRFFRWVETQPGVKRDEFVFCTILEILIESG-----------LLRSAYWVVETVVC 152
           P+ AL F  W+   P  K   + + ++L +LI +G           +++S   V +T+  
Sbjct: 103 PKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVADTLFV 162

Query: 153 VNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCN 212
           +++   ++      L   + I   + LL    +  +V++   V+ +ML + + P++   N
Sbjct: 163 LDLCRKMNKDESFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYN 222

Query: 213 RIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR 272
           +++      G   +A +   M+ E G+ P   TY +++  +C+  ++  A ++  EM  +
Sbjct: 223 KMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLK 282

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII---CGYSEKGLL 329
           GC  N V Y  LI G      +++A  L   M       +  +Y  +I   CG   K   
Sbjct: 283 GCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKS-- 340

Query: 330 VEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTL 389
            EALNL +EM  +G+ P + TY +LI  LC   ++  AR    +ML K ++P++I+YN L
Sbjct: 341 -EALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNAL 399

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
           + GYC+ G I +A  + + + SRNL P   TYN LI G C+  ++  A  +   M+ + +
Sbjct: 400 INGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKR-NVHKAMGVLNKMLERKV 458

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
           LPDV+TY  +++G C+ GN   A    + M  +GL PD + YT+ I    K     EA  
Sbjct: 459 LPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACD 518

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           L + +  K   P+++ Y  L+ G CK G + EA+ +L KM+    +P+ +T+ ++IH   
Sbjct: 519 LFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLC 578

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
             G L+    L   M++  L PT+ T T+LIH     G  + A+  F +M   G +P+  
Sbjct: 579 TDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAH 638

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           TY   I   CR  R+  A  +   M+E G+ P+ +TY+ LI    + G    A  + K M
Sbjct: 639 TYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRM 698

Query: 690 LDREIEPDYCTHSALLLKQLDKDY 713
            D   EP   T  +L+   L+  Y
Sbjct: 699 HDTGCEPSQHTFLSLIKHLLEMKY 722



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 168/556 (30%), Positives = 274/556 (49%), Gaps = 55/556 (9%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +++ + +F KM  +   P V+    +IK L  +    +A  + + M E GIKP+I TY  
Sbjct: 304 IDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTV 363

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++DS C + ++++A ELL +M  +G  PN +TYN LI G+ + G +E A  ++  M    
Sbjct: 364 LIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRN 423

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG----------- 357
           L+ +  +YN +I GY ++ +  +A+ +  +M+ R V P + TYN LI G           
Sbjct: 424 LRPNTRTYNELIKGYCKRNVH-KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482

Query: 358 ------------------------LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
                                   LCK  RV +A   F  + +K+VIP+++ Y  L+ GY
Sbjct: 483 RLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGY 542

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
           C++G + EA L+ +++ S+N +P  +T+N LI GLC  G L+ A  L+E M+   + P V
Sbjct: 543 CKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTV 602

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
            T TI+++   K G+   A   F +ML  G +PD   YTT I    + G   +A  +  +
Sbjct: 603 STDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAK 662

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM-- 571
           M   G  PDL TY+ L+ G   LG    A  +L++M   G  P   T+ S+I   LEM  
Sbjct: 663 MKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKY 722

Query: 572 GDLRRGR----------------DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           G ++ G                 +L   M+  G++P   +Y  L+      G L +A   
Sbjct: 723 GKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKV 782

Query: 616 FSEMQVK-GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
           F  MQ K GI P+ + +NAL++  C+L + ++A  +  DM   G LP   +  ILI    
Sbjct: 783 FDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLY 842

Query: 675 NAGNWQEALRLYKEML 690
             G  +    +++ +L
Sbjct: 843 KKGEKERGTSVFQNLL 858



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 131/471 (27%), Positives = 224/471 (47%), Gaps = 19/471 (4%)

Query: 186 KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVT 245
           K  V + + V NKML   +LPDV   N +I     +G    A  +  +M + G+ P   T
Sbjct: 440 KRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWT 499

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           Y +M+DS CK   ++EA +L   ++ +   PN V Y  LI G+ + G++ +A  ++  ML
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKML 559

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
                 ++ ++N +I G    G L EA  LEE+MV   + PT++T  ILI+ L K G   
Sbjct: 560 SKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFD 619

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
            A  RF +ML     PD  +Y T +  YCR G + +A  +  +++   + P + TY++LI
Sbjct: 620 HAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLI 679

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN---------------GSCKMGNL- 469
            G    G    A  + + M + G  P   T+  ++                G C M N+ 
Sbjct: 680 KGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMM 739

Query: 470 --SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK-GFPPDLITY 526
              +  E   +M+  G+ P+  +Y   + G  ++G+   A ++ + M  K G  P  + +
Sbjct: 740 EFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVF 799

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           N L+   CKL    EA +++  M+  G +P   +   +I    + G+  RG  +F N+L+
Sbjct: 800 NALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQ 859

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
            G     + + ++I     +G +E  +  F+ M+  G   +  TY+ LI G
Sbjct: 860 CGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLIEG 910


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  298 bits (763), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 160/474 (33%), Positives = 255/474 (53%), Gaps = 6/474 (1%)

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           C  G++  ALELL EM+  G +P+  T+  +IT  +  G+L+ A   +R M   G   + 
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNV 57

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
            +Y  +I  ++    L EA+ L EEM  RG  P L TYN+L+  LCK   V  A+    +
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M+     P+++++N+L+ G+C+ GN+ +A  L   + ++ + P VVTY+ LIDGLC+   
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
              A+++ E M   G+ PD  TY+ +++G CK   +  A +    M   G  PD   Y++
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            I    K G   EA +  +EM  +   PD++TYN ++ GLCKLG + EA  +L +M   G
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297

Query: 554 -FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
             +PD +TY+++I+   +   L   + L + M + G +P +VTYT +I      GRLE A
Sbjct: 298 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 357

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
                 M+  G  PNV+TY  LI+GLC+ R++D+A  +  +M   G  PN  TY  ++N 
Sbjct: 358 EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 417

Query: 673 NCNAGNWQEALRLYKEMLD--REIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
            C +G  +EA +L + M D   E  PD  T+  ++   +  D    A + LE +
Sbjct: 418 LCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471



 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 136/410 (33%), Positives = 231/410 (56%), Gaps = 5/410 (1%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  + +   +E+ + +  +M   G  P++   N ++  L        A++V + M E G
Sbjct: 63  LIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGG 122

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
             P+++T+N+++D FCK G + +A +LL  M  +G  PN VTY+ LI G  ++ +  +A+
Sbjct: 123 FAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAK 182

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            ++ +M   G+   A +Y+ +I G  +   + EA  +   M   G  P +  Y+ +I+  
Sbjct: 183 EVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAF 242

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR-SRNLVPT 417
           CK G++ +A+    EM ++   PD+++YNT++ G C+ G I EA ++ D+++ S +++P 
Sbjct: 243 CKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPD 302

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           VVTY+T+I+GLC+   L  AQ+L + M   G  PDV+TYT +++G CK G L  A     
Sbjct: 303 VVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQ 362

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            M R G  P+   YTT I+G  K     EA R+ EEM   G PP+L+TYN +V+GLC  G
Sbjct: 363 GMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSG 422

Query: 538 SLEEANELLRKMVGDGFI---PDHITYTSIIHASLEMGDLRRGRDLFNNM 584
            ++EA +L+++M  DG     PD  TY +I++A +    ++    L   M
Sbjct: 423 RIKEAQQLVQRM-KDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471



 Score =  251 bits (642), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 144/465 (30%), Positives = 238/465 (51%), Gaps = 6/465 (1%)

Query: 193 LLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDS 252
           L +  +M   G  PD      II  + + G    A +  R MG     P++VTY  ++ +
Sbjct: 10  LELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMG---CDPNVVTYTALIAA 66

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
           F +  +++EA++LL EM+ RGC PN VTYNVL+    +   +  A+ +++ M++ G   +
Sbjct: 67  FARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPN 126

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
             ++N ++ G+ ++G + +A  L   MV +G+ P + TY+ LI GLCK  +  +A+    
Sbjct: 127 VMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLE 186

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
           EM    V PD  +Y+ L++G C++  I EA  +   +      P VV Y+++I   C+ G
Sbjct: 187 EMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSG 246

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG-LQPDRFAY 491
            L  AQ+  + M  Q   PDV+TY  +++G CK+G ++ A+   ++M   G + PD   Y
Sbjct: 247 KLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTY 306

Query: 492 TTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
           +T I G  K     EA +L + M   G  PD++TY  ++ GLCK G LEEA  LL+ M  
Sbjct: 307 STVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKR 366

Query: 552 DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLEL 611
            G  P+ +TYT++I    +   +     +   M   G  P LVTY  +++     GR++ 
Sbjct: 367 AGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKE 426

Query: 612 AFMYFSEMQ--VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           A      M+       P+  TY  ++N L     + +A  L   M
Sbjct: 427 AQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  298 bits (763), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 190/655 (29%), Positives = 315/655 (48%), Gaps = 43/655 (6%)

Query: 55  ESYYKELIISTVEEKPWAFCNNRWVSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWV 114
           + + K+ +   V E+ W   ++  +   F + ++ P    RVL  + +  R+ALRFF W 
Sbjct: 67  DCFDKDSVREIVREQRW---DDFRIVSLFDSALA-PIWASRVLVELCQDARLALRFFEWA 122

Query: 115 ETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVN----MHGILDVLIGGGLSSC 170
           + + G +     +C ++ IL  +     A  V++ ++C+        + D+L        
Sbjct: 123 KGRIGFQHTSEAYCILVHILFCARFYSDANAVLKELICLRRVLPSWDVFDLLWATRNVCV 182

Query: 171 VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV 230
               + D L     +  M+E+    F KM +  + P  ++CN ++  L   G    +R+ 
Sbjct: 183 PGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKF 242

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
           ++ MG  GIK S+ TY                                   N++I    +
Sbjct: 243 FKDMGAAGIKRSVFTY-----------------------------------NIMIDYLCK 267

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
            G+LE AR L   M + G      +YN +I G+ + GLL E + + E+M      P + T
Sbjct: 268 EGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVIT 327

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           YN LI   CK+ R+  A     EM    + P++++Y+T +  +C+ G + EA   F ++R
Sbjct: 328 YNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMR 387

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
              L P   TY +LID  C+ G+L  A +L E ++  GI  +V+TYT +++G C+ G + 
Sbjct: 388 RVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMK 447

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            A E F  ML  G+ P++  YT  + G +K  +   A  + +EM  K   PDL+ Y  ++
Sbjct: 448 EAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTIL 507

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
            GLC    LEEA  L+ ++   G   + + YT+++ A  + G       L   ML  GL 
Sbjct: 508 WGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLI 567

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
            T VTY  LI      G ++ A  +F  M   G++PNV  Y AL++GLC+    + A  L
Sbjct: 568 ATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKL 627

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           F +M ++G++P+K  YT LI+ N   GN QEAL L   M++  +E D   ++AL+
Sbjct: 628 FDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALI 682



 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 162/550 (29%), Positives = 266/550 (48%), Gaps = 52/550 (9%)

Query: 86  VVSDPELLVRVLNRIREKPR--IALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSA 143
           V   P     +L+R+ +  R  ++ +FF+ +    G+KR  F +  +++ L + G L  A
Sbjct: 216 VFPKPRSCNALLHRLSKVGRGDLSRKFFKDM-GAAGIKRSVFTYNIMIDYLCKEGDLEMA 274

Query: 144 YWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNG 203
                         +   +   G +    I   + L+  + K  ++++C+ +F +M    
Sbjct: 275 ------------RSLFTQMKEAGFTP--DIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 320

Query: 204 LLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEAL 263
             PDV   N +I          KA E    M   G+KP++VTY+T +D+FCKEG +QEA+
Sbjct: 321 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI 380

Query: 264 ELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGY 323
           +   +M+    +PN  TY  LI    + G L +A  L+ ++L+ G+K++  +Y  ++ G 
Sbjct: 381 KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL 440

Query: 324 SEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
            E+G + EA  +   M+  GVAP   TY  L++G  K   +  A+    EM  K + PD+
Sbjct: 441 CEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDL 500

Query: 384 ISYNTLLYGYC-----------------------------------RSGNIGEAFLLFDE 408
           + Y T+L+G C                                   +SG   EA  L +E
Sbjct: 501 LLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEE 560

Query: 409 LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
           +    L+ T VTY  LIDGLC+ G ++ A      M   G+ P+V  YT +V+G CK   
Sbjct: 561 MLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNC 620

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
             +A++ F+EML KG+ PD+ AYT  I G +K G+  EA  L++ M+  G   DL  Y  
Sbjct: 621 FEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTA 680

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           L+ GL   G +++A  LL +M+G G +PD + Y  +I     +G +    +L N M ++G
Sbjct: 681 LIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRG 740

Query: 589 LSPTLVTYTV 598
           +   L  + V
Sbjct: 741 MITGLSDHAV 750



 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 145/489 (29%), Positives = 241/489 (49%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           S+   ++++    K+  +E    +F +M   G  PD+   N +I      G   +   ++
Sbjct: 254 SVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIF 313

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M +    P ++TYN +++ FCK   M +A E L EM+  G  PN VTY+  I  F + 
Sbjct: 314 EQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKE 373

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G L++A     DM ++ L  +  +Y  +I    + G L EAL L EE++  G+   + TY
Sbjct: 374 GMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTY 433

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
             L+ GLC+ GR+ +A   F  ML   V P+  +Y  L++G+ ++  +  A  +  E++ 
Sbjct: 434 TALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKE 493

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           + + P ++ Y T++ GLC    LE A+ L   +   GI  + + YT +++   K G  + 
Sbjct: 494 KCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATE 553

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A     EML  GL      Y   I G  K G   EA      M   G  P++  Y  LV 
Sbjct: 554 ALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVD 613

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           GLCK    E A +L  +M+  G +PD I YT++I  +++ G+L+   +L + M+  G+  
Sbjct: 614 GLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMEL 673

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
            L  YT LI   +  G+++ A     EM  KG+ P+ + Y  LI     L ++D+A  L 
Sbjct: 674 DLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQ 733

Query: 652 IDMEEEGIL 660
            +M + G++
Sbjct: 734 NEMAKRGMI 742


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  297 bits (761), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 156/531 (29%), Positives = 287/531 (54%), Gaps = 2/531 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
           +F  M+++   P +   ++++  + + N F +    +   M   GI  ++ TY+ +++ F
Sbjct: 68  LFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDL-VISLGEQMQNLGISHNLYTYSILINCF 126

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           C+  ++  AL +L +M   G  P+ VT N L+ GF     +  A  L+  M+++G +  +
Sbjct: 127 CRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDS 186

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
            ++N +I G        EA+ L + MV +G  P L TY I++ GLCK G +  A     +
Sbjct: 187 FTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKK 246

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M +  + P ++ YNT++   C   N+ +A  LF E+ ++ + P VVTYN+LI  LC YG 
Sbjct: 247 MEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 306

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
              A +L  +MI + I P+V+T++ +++   K G L  A + ++EM+++ + PD F Y++
Sbjct: 307 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 366

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            I G        EA  + E M++K   P+++TYN L+ G CK   ++E  EL R+M   G
Sbjct: 367 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRG 426

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
            + + +TYT++IH   +  +    + +F  M+  G+ P ++TY++L+      G++E A 
Sbjct: 427 LVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETAL 486

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
           + F  +Q   + P++ TYN +I G+C+  +++  + LF  +  +G+ PN  TYT +++  
Sbjct: 487 VVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGF 546

Query: 674 CNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           C  G  +EA  L++EM +    PD  T++ L+   L    K  + E +  +
Sbjct: 547 CRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 145/470 (30%), Positives = 249/470 (52%), Gaps = 2/470 (0%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +L+  + ++S +   L V  KM++ G  PD+   N ++           A  +   M E 
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G +P   T+NT++    +     EA+ L+  M  +GC P+ VTY +++ G  + G+++ A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L++ M +  ++     YN II        + +ALNL  EM  +G+ P + TYN LI  
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           LC +GR SDA     +M+ + + P++++++ L+  + + G + EA  L+DE+  R++ P 
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           + TY++LI+G C +  L+ A+ + E MI++   P+V+TY  ++ G CK   +    E F 
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           EM ++GL  +   YTT I G  +  +   A  + ++M++ G  PD++TY++L+ GLC  G
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            +E A  +   +      PD  TY  +I    + G +  G DLF ++  KG+ P +VTYT
Sbjct: 481 KVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 540

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
            ++     +G  E A   F EM+ +G  P+  TYN LI     LR  D+A
Sbjct: 541 TMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRA--HLRDGDKA 588



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 137/433 (31%), Positives = 233/433 (53%), Gaps = 7/433 (1%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           + +   + + + ++M+  G  PD+     ++  L   G    A  + + M +  I+P +V
Sbjct: 198 RHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVV 257

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
            YNT++D+ C    + +AL L  EM  +G  PN VTYN LI      G    A  L+ DM
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 317

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           ++  +  +  +++ +I  + ++G LVEA  L +EM+ R + P + TY+ LI G C   R+
Sbjct: 318 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 377

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            +A+H F  M+ K+  P++++YNTL+ G+C++  + E   LF E+  R LV   VTY TL
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           I G  +  + + AQ + + M++ G+LPD++TY+I+++G C  G +  A   F  + R  +
Sbjct: 438 IHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM 497

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
           +PD + Y   I G  K G   + + L   +  KG  P+++TY  ++ G C+ G  EEA+ 
Sbjct: 498 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 557

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR---KGLSPTLVTYTVLIH 601
           L R+M  +G +PD  TY ++I A L  GD     +L   M      G + T+   T ++H
Sbjct: 558 LFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNMLH 617

Query: 602 AHAARGRLELAFM 614
                GRL+ +F+
Sbjct: 618 D----GRLDKSFL 626



 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 135/431 (31%), Positives = 226/431 (52%), Gaps = 2/431 (0%)

Query: 277 NGVTYNVLITGFSR--NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
           +GV Y+      +R  + +L+ A  L  DM+K     S   ++ ++   ++       ++
Sbjct: 43  SGVRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVIS 102

Query: 335 LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
           L E+M   G++  L TY+ILI   C+  ++S A     +M++    PDI++ N+LL G+C
Sbjct: 103 LGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFC 162

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
               I +A  L  ++      P   T+NTLI GL R+     A  L + M+ +G  PD++
Sbjct: 163 HGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLV 222

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
           TY I+VNG CK G++ +A     +M +  ++P    Y T I       + ++A  L  EM
Sbjct: 223 TYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEM 282

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
             KG  P+++TYN L+  LC  G   +A+ LL  M+     P+ +T++++I A ++ G L
Sbjct: 283 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 342

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
                L++ M+++ + P + TY+ LI+      RL+ A   F  M  K   PNV+TYN L
Sbjct: 343 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 402

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           I G C+ +R+D+   LF +M + G++ N  TYT LI+    A     A  ++K+M+   +
Sbjct: 403 IKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGV 462

Query: 695 EPDYCTHSALL 705
            PD  T+S LL
Sbjct: 463 LPDIMTYSILL 473


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  297 bits (760), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 170/477 (35%), Positives = 261/477 (54%), Gaps = 13/477 (2%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           KK  +     + NK+ + G+ P +   N +I  +  +G   +A  ++  MG  G+ P+ V
Sbjct: 332 KKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDV 391

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY+ ++DSFCK G++  AL  L +M   G       Y+ LI+G  + G+L  A+ L  +M
Sbjct: 392 TYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEM 451

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           +  GLK +   Y  +I GY ++G L  A  L  EM  +G++P   T+  LI GLC   R+
Sbjct: 452 IANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRM 511

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
           ++A   F EM+  NVIP+ ++YN L+ G+C+ GN   AF L DE+  + LVP   TY  L
Sbjct: 512 AEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPL 571

Query: 425 IDGLCRYG----------DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
           I GLC  G          DL+  QQ K N I +G LP+V+TYT ++NG CK+G +  A  
Sbjct: 572 ISGLCSTGRVSEAREFMNDLQGEQQ-KLNEI-EGCLPNVVTYTALINGLCKIGLMDKAEL 629

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
              EML     P++  Y   +      G+  +A +L + +L +GF  + +TYN+L+ G C
Sbjct: 630 LCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLL-EGFLANTVTYNILIRGFC 688

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           KLG ++EA E+L  M+  G  PD I+Y++II+     GDL+    L+ +ML +G++P  V
Sbjct: 689 KLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTV 748

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
            Y  LI+     G L  AF    +M  +G++PN  TYN+LI+G C +  +      F
Sbjct: 749 AYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTADYF 805



 Score =  293 bits (749), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 197/703 (28%), Positives = 330/703 (46%), Gaps = 58/703 (8%)

Query: 75  NNRW---VSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTIL 131
           N  W   +++ F +    P  + +VL +  +  R+ALRFF ++            FC ++
Sbjct: 41  NQSWRVALNNSFISQTLKPHHVEKVLIQTLDDSRLALRFFNFLGLHKNFDHSTTSFCILI 100

Query: 132 EILIESGLLRSAYWVVET------VVCVNMHGILDVLIGGGLSSCVSIKI-LDLLLLIYT 184
             L++S L    YW   +      +  +N  G+ +  +        S  +  DLL+  Y 
Sbjct: 101 HALVQSNL----YWPASSLLQTLLLRGLNPEGLFESFLDSYRKCNFSTTLGFDLLIQTYV 156

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK-VLRDNGFSVKAREVYRMMGEFGIKPSI 243
           +       L+V   M+  G+LP ++  + ++  ++R   F + A  ++  +   G++P +
Sbjct: 157 QNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRM-ALHLFDEIVSSGLRPDV 215

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
             Y  ++ S C+  +   A E++  M+  GC  +  TYNV I G  +N  + +A  +   
Sbjct: 216 YVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNL 275

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           +   GL+    +Y  ++ G  +         +  EM+  G  P+ A  + L+ GL K G 
Sbjct: 276 LSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGN 335

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           +  A     ++ +  V P +  YN L+   C+ G + EA  LF+ +  + L P  VTY+ 
Sbjct: 336 IGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSI 395

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           LID  C+ G L+VA      M   GI   V  Y+ +++G CK+G L  A+  F+EM+  G
Sbjct: 396 LIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANG 455

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           L+P+   YT+ I+G  K G+   A+RL  EM  KG  P+  T+  L+ GLC    + EAN
Sbjct: 456 LKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEAN 515

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
           +L  +MV    IP+ +TY  +I    + G+  R  +L + M+ KGL P   TY  LI   
Sbjct: 516 KLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGL 575

Query: 604 AARGRLELAFMYFSEMQ--------VKGIRPNVITYNALINGLCRLRRIDQA-------- 647
            + GR+  A  + +++Q        ++G  PNV+TY ALINGLC++  +D+A        
Sbjct: 576 CSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREML 635

Query: 648 ----------YGLFID-------MEE---------EGILPNKYTYTILINENCNAGNWQE 681
                     Y  F+D       +E+         EG L N  TY ILI   C  G  QE
Sbjct: 636 ASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQE 695

Query: 682 ALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           A  +   M+D  I PD  ++S ++ +   +     A++  ES+
Sbjct: 696 AAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESM 738



 Score =  288 bits (736), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 156/488 (31%), Positives = 267/488 (54%), Gaps = 9/488 (1%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           + N+M+  G +P     + ++  LR  G    A ++   + +FG+ PS+  YN +++S C
Sbjct: 307 MMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMC 366

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K+G++ EA  L   M  +G  PN VTY++LI  F + G+L+ A   +  M ++G+K + +
Sbjct: 367 KDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVY 426

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
            Y+ +I G+ + G L  A +L +EM+  G+ P +  Y  LI G CK G + +A   + EM
Sbjct: 427 PYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEM 486

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
             K + P+  ++  L+ G C +  + EA  LF E+   N++P  VTYN LI+G C+ G+ 
Sbjct: 487 TGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNT 546

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK--------GLQP 486
             A +L + M+ +G++PD  TY  +++G C  G +S AREF N++  +        G  P
Sbjct: 547 VRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLP 606

Query: 487 DRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
           +   YT  I G  K+G   +A  L  EMLA    P+  TY   +  L   G++E+A +L 
Sbjct: 607 NVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQL- 665

Query: 547 RKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAAR 606
             ++ +GF+ + +TY  +I    ++G ++   ++  NM+  G+SP  ++Y+ +I+ +  R
Sbjct: 666 HDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRR 725

Query: 607 GRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
           G L+ A   +  M  +G+ P+ + YN LI G C    + +A+ L  DM   G+ PN+ TY
Sbjct: 726 GDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATY 785

Query: 667 TILINENC 674
             LI+  C
Sbjct: 786 NSLIHGTC 793



 Score =  265 bits (677), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 172/617 (27%), Positives = 305/617 (49%), Gaps = 29/617 (4%)

Query: 99  RIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGI 158
           RIR+  R+AL  F  +    G++ D +V+  ++  L E      A  V+         G 
Sbjct: 192 RIRQF-RMALHLFDEI-VSSGLRPDVYVYTAVVRSLCELKDFIRAREVI---------GR 240

Query: 159 LDVLIGGGLSSC-VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKN-CNRIIK 216
           ++       S C +S+   ++ +    K   V + + + N +   GL  DV   C  ++ 
Sbjct: 241 MES------SGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLG 294

Query: 217 VLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSP 276
           + +   F     E+   M EFG  PS    + ++D   K+G +  A +L+ +++  G +P
Sbjct: 295 LCKVEEFEA-GEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAP 353

Query: 277 NGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLE 336
           +   YN LI    ++G+L++A  L  +M   GL  +  +Y+ +I  + ++G L  AL+  
Sbjct: 354 SLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFL 413

Query: 337 EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS 396
            +M   G+  T+  Y+ LI G CK G++  A+  F EM+   + P+++ Y +L+ GYC+ 
Sbjct: 414 GKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKE 473

Query: 397 GNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
           G +  AF L+ E+  + + P   T+  LI GLC    +  A +L   M+   ++P+ +TY
Sbjct: 474 GELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTY 533

Query: 457 TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA 516
            +++ G CK GN   A E  +EM+ KGL PD + Y   I+G    G  SEA     ++  
Sbjct: 534 NVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQG 593

Query: 517 K--------GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
           +        G  P+++TY  L++GLCK+G +++A  L R+M+    +P+  TY   +   
Sbjct: 594 EQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYL 653

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
              G++ +   L +++L +G     VTY +LI      GR++ A      M   GI P+ 
Sbjct: 654 TSEGNIEKAIQL-HDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDC 712

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
           I+Y+ +I   CR   + +A  L+  M   G+ P+   Y  LI   C  G   +A  L  +
Sbjct: 713 ISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDD 772

Query: 689 MLDREIEPDYCTHSALL 705
           M+ R ++P+  T+++L+
Sbjct: 773 MMRRGVKPNRATYNSLI 789



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 94/291 (32%), Positives = 163/291 (56%), Gaps = 9/291 (3%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F +M+   ++P+    N +I+     G +V+A E+   M E G+ P   TY  ++   C
Sbjct: 517 LFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLC 576

Query: 255 KEGEMQEALELLWEMQGR--------GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
             G + EA E + ++QG         GC PN VTY  LI G  + G +++A  L R+ML 
Sbjct: 577 STGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLA 636

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
                + ++Y   +   + +G + +A+ L + ++   +A T+ TYNILI G CK GR+ +
Sbjct: 637 SNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTV-TYNILIRGFCKLGRIQE 695

Query: 367 ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
           A      M+   + PD ISY+T++Y YCR G++ EA  L++ + +R + P  V YN LI 
Sbjct: 696 AAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIY 755

Query: 427 GLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           G C  G+L  A +L+++M+ +G+ P+  TY  +++G+C M ++S   ++F+
Sbjct: 756 GCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTADYFS 806


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  296 bits (759), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 166/499 (33%), Positives = 273/499 (54%), Gaps = 2/499 (0%)

Query: 196 FNKMLRNGLLPDVKNCNRIIK--VLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
           F++MLR    P +   N+I+   V  +N     A  +   +   GI P+IVT+N +++ +
Sbjct: 45  FHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCY 104

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           C  GEM  A  +  ++   G  P  +T+N LI G   NG+L++A      ++ LG  +  
Sbjct: 105 CHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQ 164

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
            SY  +I G  + G    AL + +++  + V   +  YNI+I  LCK   VSDA   + E
Sbjct: 165 VSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSE 224

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M+ K + PD++++N+L+ G+C  G + EAF LF E+  +N+ P V T++ L+D LC+ G+
Sbjct: 225 MITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGN 284

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           +  A+ +   M+ QG++PDV+TY+ +++G C +  ++ A+  F+ M R G+ P   +Y  
Sbjct: 285 ITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNI 344

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            I G  K+    EA  L +EM  KG  PD +TYN L+ GLCKLG +  A +L+ +M  +G
Sbjct: 345 MINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNG 404

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
              D +TY S+I    +   + +   L   +  +G+ P++ TY +LI      GRL+ A 
Sbjct: 405 IPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQ 464

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
             F ++ +KG   N  TYN +INGLC+    ++A  L   ME  GI+P+  TY  +I   
Sbjct: 465 DVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRAL 524

Query: 674 CNAGNWQEALRLYKEMLDR 692
                 ++A +L +EM+ R
Sbjct: 525 FRKDENEKAEKLLREMIIR 543



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 152/512 (29%), Positives = 263/512 (51%), Gaps = 5/512 (0%)

Query: 219 RDNGFSVK--AREVYRMMGEFGIKPSIVTYNTMLDSFCK--EGEMQEALELLWEMQGRGC 274
           + N F V       +RM+      PSIV +N +L S  K        A+ L  +++ +G 
Sbjct: 32  KSNDFDVNNDVSSFHRML-RMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGI 90

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
           +P  VT+N+L+  +   GE+  A  +   +LKLG   +  ++N +I G    G L EAL+
Sbjct: 91  TPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALH 150

Query: 335 LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
             + ++  G      +Y  LI GLCK G    A     ++  K V  D++ YN ++   C
Sbjct: 151 FHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLC 210

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
           +   + +A+ L+ E+ ++ + P VVT+N+LI G C  G L+ A  L   M+ + I PDV 
Sbjct: 211 KDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVY 270

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
           T++I+V+  CK GN++ A+     M+++G+ PD   Y++ + G   + + ++A  +   M
Sbjct: 271 TFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTM 330

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
              G  P   +YN++++GL K+  ++EA  L ++M   G  PD +TY S+I    ++G +
Sbjct: 331 SRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRI 390

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
                L + M   G+   ++TY  LI        ++ A     +++ +GI+P++ TYN L
Sbjct: 391 SYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNIL 450

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           I+GLC+  R+  A  +F D+  +G   N +TY I+IN  C  G + EA  L  +M +  I
Sbjct: 451 IDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGI 510

Query: 695 EPDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
            PD  T+  ++     KD    A + L  + +
Sbjct: 511 IPDAVTYETIIRALFRKDENEKAEKLLREMII 542



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 117/221 (52%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           VF+ M R G+ P   + N +I  L       +A  +++ M   GI P  VTYN+++D  C
Sbjct: 326 VFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLC 385

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K G +  A +L+ EM   G   + +TYN LI    +N  +++A  L++ +   G++ S +
Sbjct: 386 KLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMY 445

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +YN +I G  + G L  A ++ ++++ +G +    TYNI+I GLCK G  ++A     +M
Sbjct: 446 TYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKM 505

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
               +IPD ++Y T++    R     +A  L  E+  R L+
Sbjct: 506 ENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGLL 546



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 99/208 (47%), Gaps = 15/208 (7%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           AL  F+ +  + G+  D   + ++++ L + G +  A+ +V+      MH         G
Sbjct: 358 ALSLFKEMCCK-GIAPDTVTYNSLIDGLCKLGRISYAWQLVD-----EMHN-------NG 404

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
           + +   I   + L+ +  K   +++ + +  K+   G+ P +   N +I  L   G    
Sbjct: 405 IPA--DILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKN 462

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A++V++ +   G   +  TYN M++  CKEG   EA  LL +M+  G  P+ VTY  +I 
Sbjct: 463 AQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIR 522

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAH 314
              R  E E+A  L+R+M+  GL +  H
Sbjct: 523 ALFRKDENEKAEKLLREMIIRGLLLCKH 550


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  296 bits (759), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 191/636 (30%), Positives = 316/636 (49%), Gaps = 37/636 (5%)

Query: 93   LVRVLNRIREKPRIALRFFRWVETQPGVKRDEFV--FCTILEILIESGLLRSAYWVVETV 150
            L+ VL +I+   R+ L FF W  +    +RD  +   C ++ + + S  L+ A  ++ + 
Sbjct: 513  LIWVLMKIKCDYRLVLDFFDWARS----RRDSNLESLCIVIHLAVASKDLKVAQSLISSF 568

Query: 151  VCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRN-GLLPDVK 209
                   + +  +          +  DLL+  Y       +   VF ++L   G+LP+  
Sbjct: 569  WERPKLNVTESFV----------QFFDLLVYTYKDWGSDPRVFDVFFQVLVEFGMLPE-- 616

Query: 210  NCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKE-GEMQEALELLWE 268
                             AR+V+  M  +G+  S+ + N  L    K+  +   A+ +  E
Sbjct: 617  -----------------ARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFRE 659

Query: 269  MQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
                G   N  +YN++I    + G + +A  L+  M   G      SY+ +I GY   G 
Sbjct: 660  FPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGE 719

Query: 329  LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNT 388
            L +   L E+M  +G+ P   TY  +I  LC+  ++++A   F EM+ + ++PD I Y T
Sbjct: 720  LDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTT 779

Query: 389  LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
            L+ G+C+ G+I  A   F E+ SR++ P V+TY  +I G C+ GD+  A +L   M+ +G
Sbjct: 780  LVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRG 839

Query: 449  ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
            + PD+IT+T ++NG CK G++  A    N M++ G  P+   YTT I G  K GD   A 
Sbjct: 840  LEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 899

Query: 509  RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
             L  EM   G  P++ TYN +V+GLCK G++EEA +L+ +    G   D +TYT+++ A 
Sbjct: 900  ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 959

Query: 569  LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
             + G++ + +++   ML KGL PT+VT+ VL++     G LE      + M  KGI PN 
Sbjct: 960  CKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 1019

Query: 629  ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
             T+N L+   C    +  A  ++ DM   G+ P+  TY  L+  +CNA N +EA  L++E
Sbjct: 1020 TTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQE 1079

Query: 689  MLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
            M  +       T+S L+     +   V A E  + +
Sbjct: 1080 MKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQM 1115


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  296 bits (758), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 173/576 (30%), Positives = 295/576 (51%), Gaps = 39/576 (6%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+L + +    E  + + ++M+  G  P     + ++  LR  G    A E+   +G FG
Sbjct: 301 LVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFG 360

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
             P++  YN +++S CK G++ +A  L   M      PNG+TY++LI  F R+G L+ A 
Sbjct: 361 FVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAI 420

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
                M++ G+  + ++YN +I G  + G L  A +L  EM  +GV PT  T+  LI G 
Sbjct: 421 SYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGY 480

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           CK  +V  A   + +M+   + P++ ++  L+ G C +  + EA  LFDEL  R + PT 
Sbjct: 481 CKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTE 540

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           VTYN LI+G CR G ++ A +L E+M  +G++PD  TY  +++G C  G +S A++F ++
Sbjct: 541 VTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDD 600

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           + ++ ++ +   Y+  + G  + G   EA     EM+ +G   DL+ + VL+ G  K   
Sbjct: 601 LHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPD 660

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
            +   +LL+ M   G  PD++ YTS+I    + G  ++  + ++ M+ +   P +VTYT 
Sbjct: 661 RKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTA 720

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITY--------------------------- 631
           L++     G ++ A + F  MQ   + PN ITY                           
Sbjct: 721 LMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLKGL 780

Query: 632 -------NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
                  N +I G C+L R  +A  +  +M E GI P+  TY+ LI E C +GN   +++
Sbjct: 781 LANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVK 840

Query: 685 LYKEMLDREIEPDYCTHSALLL-----KQLDKDYKV 715
           L+  ML+R +EPD   ++ L+       +LDK +++
Sbjct: 841 LWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFEL 876



 Score =  280 bits (717), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 176/658 (26%), Positives = 318/658 (48%), Gaps = 46/658 (6%)

Query: 90  PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVET 149
           P  + +VL    +  ++ALRFF ++     +      +  ++  L+ S L   A  ++ T
Sbjct: 69  PHHVEQVLMNTLDDAKLALRFFNFLGLHKNMNHSTTSYAIMVHALVHSRLFWPANSLLHT 128

Query: 150 VV-------CVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRN 202
           ++       CV  H  LD       SS +     +LL+  Y   S +   +++   M  N
Sbjct: 129 LLLRESHPKCVFSH-FLDSYKRCKFSSTLG---FNLLVQNYVLSSRIFDAVVIVKLMFAN 184

Query: 203 GLLPDVKN-----------------------------------CNRIIKVLRDNGFSVKA 227
            LLP+V+                                    C+ +++ + +    ++A
Sbjct: 185 NLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRA 244

Query: 228 REVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITG 287
           +E  R M   G   SIVTYN ++   CK   + EA+E+   + G+G + + VTY  L+ G
Sbjct: 245 KEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLG 304

Query: 288 FSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPT 347
           F R  + E    L+ +M++LG   +  + + ++ G  ++G + +A  L  ++   G  P 
Sbjct: 305 FCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPN 364

Query: 348 LATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFD 407
           L  YN LI  LCK G +  A   +  M   N+ P+ I+Y+ L+  +CRSG +  A   FD
Sbjct: 365 LFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFD 424

Query: 408 ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG 467
            +    +  TV  YN+LI+G C++GDL  A+ L   M N+G+ P   T+T +++G CK  
Sbjct: 425 RMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDL 484

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
            +  A + +N+M+  G+ P+ + +T  I+G       +EA  L +E++ +   P  +TYN
Sbjct: 485 QVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYN 544

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
           VL+ G C+ G +++A ELL  M   G +PD  TY  +I      G + + +D  +++ ++
Sbjct: 545 VLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQ 604

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
            +    + Y+ L+H +   GRL  A     EM  +GI  +++ +  LI+G  +       
Sbjct: 605 NVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTF 664

Query: 648 YGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           + L  DM ++G+ P+   YT +I+     G++++A   +  M+  E  P+  T++AL+
Sbjct: 665 FDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALM 722



 Score =  255 bits (651), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 157/548 (28%), Positives = 263/548 (47%), Gaps = 36/548 (6%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K+  ++    +  K+ R G +P++   N +I  L   G   KA  +Y  M    ++P+ +
Sbjct: 342 KQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGI 401

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY+ ++DSFC+ G +  A+     M   G       YN LI G  + G+L  A  L  +M
Sbjct: 402 TYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEM 461

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
              G++ +A ++  +I GY +   + +A  L  +M+  G+ P + T+  LI GLC   ++
Sbjct: 462 TNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKM 521

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
           ++A   F E++ + + P  ++YN L+ GYCR G I +AF L +++  + LVP   TY  L
Sbjct: 522 AEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPL 581

Query: 425 IDGLCRYGDLEVAQQL-----KEN------------------------------MINQGI 449
           I GLC  G +  A+       K+N                              MI +GI
Sbjct: 582 ISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGI 641

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
             D++ + ++++G+ K  +     +   +M  +GL+PD   YT+ I    K G   +A+ 
Sbjct: 642 NMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFE 701

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
             + M+ +   P+++TY  L++GLCK G ++ A  L ++M      P+ ITY   +    
Sbjct: 702 CWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLT 761

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
           + G+++    L + ML KGL    VT+ ++I      GR   A    SEM   GI P+ +
Sbjct: 762 KEGNMKEAIGLHHAML-KGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCV 820

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           TY+ LI   CR   +  +  L+  M   G+ P+   Y +LI   C  G   +A  L  +M
Sbjct: 821 TYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDM 880

Query: 690 LDREIEPD 697
           L R I PD
Sbjct: 881 LRRGIIPD 888



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 142/488 (29%), Positives = 254/488 (52%), Gaps = 2/488 (0%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +L+  + +   ++  +  F++M+++G+   V   N +I      G    A  ++  M   
Sbjct: 405 ILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNK 464

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G++P+  T+ +++  +CK+ ++Q+A +L  +M   G +PN  T+  LI+G     ++ +A
Sbjct: 465 GVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEA 524

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L  ++++  +K +  +YN +I GY   G + +A  L E+M  +G+ P   TY  LI G
Sbjct: 525 SELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISG 584

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           LC  GRVS A+    ++ ++NV  + + Y+ LL+GYC+ G + EA     E+  R +   
Sbjct: 585 LCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMD 644

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           +V +  LIDG  +  D +    L ++M +QG+ PD + YT M++   K G+   A E ++
Sbjct: 645 LVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWD 704

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            M+ +   P+   YT  + G  K G+   A  L + M A   PP+ ITY   +  L K G
Sbjct: 705 LMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEG 764

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
           +++EA  L   M+  G + + +T+  II    ++G       + + M   G+ P  VTY+
Sbjct: 765 NMKEAIGLHHAML-KGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYS 823

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
            LI+ +   G +  +   +  M  +G+ P+++ YN LI G C    +D+A+ L  DM   
Sbjct: 824 TLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRR 883

Query: 658 GILP-NKY 664
           GI+P NKY
Sbjct: 884 GIIPDNKY 891



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 114/374 (30%), Positives = 186/374 (49%)

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           +N+L+       R+ DA      M   N++P++ + + LL G  +       + LFDE  
Sbjct: 158 FNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELFDESV 217

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
           +  + P   T + ++  +C   D   A++    M   G    ++TY ++++G CK   +S
Sbjct: 218 NAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVS 277

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            A E    +  KGL  D   Y T + G  +L       +L +EM+  GF P     + LV
Sbjct: 278 EAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLV 337

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
            GL K G +++A EL+ K+   GF+P+   Y ++I++  + GDL +   L++NM    L 
Sbjct: 338 DGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLR 397

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           P  +TY++LI +    GRL++A  YF  M   GI   V  YN+LING C+   +  A  L
Sbjct: 398 PNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESL 457

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLD 710
           FI+M  +G+ P   T+T LI+  C     Q+A +LY +M+D  I P+  T +AL+     
Sbjct: 458 FIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCS 517

Query: 711 KDYKVHAVEYLESL 724
            +    A E  + L
Sbjct: 518 TNKMAEASELFDEL 531


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  296 bits (757), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 175/601 (29%), Positives = 306/601 (50%), Gaps = 16/601 (2%)

Query: 90  PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVF-CTILEILIESGLLRSAYWVVE 148
           P+ +  VL + ++ P  AL  F  V+ + G K     + C I ++      +     + E
Sbjct: 7   PKHVAAVLKQ-QKDPLKALEMFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVAMENVLAE 65

Query: 149 TVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDV 208
           T + ++   +  V IG   S              Y +K  V++ + VF +M      P V
Sbjct: 66  TRMDIDNSLLEGVYIGAMKS--------------YGRKGKVQEAVDVFERMDFYNCEPSV 111

Query: 209 KNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWE 268
            + N I+ +L ++G+  +A +V+  M   GI P + T+   + SFC+      AL LL  
Sbjct: 112 LSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNN 171

Query: 269 MQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
           M  +GC  N V Y  ++ GF       +A  L  DML++G+     ++N ++    +KG 
Sbjct: 172 MVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGE 231

Query: 329 LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNT 388
           + E+  L  +++ +G+   L T+NI I GLC+ G +S A      ++R+ + PD+++YNT
Sbjct: 232 VQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNT 291

Query: 389 LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
           L+ G C++ N+ EA     +L +  L P   TYNTLIDG C+ G L+ A+++ +  I +G
Sbjct: 292 LICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKG 351

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
            +PD  TY  ++NG C+   +  A   FN  L KGL+P    Y   I G  + G   +A 
Sbjct: 352 FVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQAL 411

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
           ++  EM   G   D+ TYN++++GLCK+G + +AN L+   +  G++PD  T+ ++I   
Sbjct: 412 QMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGY 471

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
            +   +     + N M   G++P ++TY  +++  +   + E     F  M  KG  PN 
Sbjct: 472 CKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNK 531

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
           ITYN L   LC+  ++++A  L  ++  +GI P+  ++  +I+   N G+ + A +L++ 
Sbjct: 532 ITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRR 591

Query: 689 M 689
           M
Sbjct: 592 M 592



 Score =  285 bits (728), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 149/480 (31%), Positives = 261/480 (54%)

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           +A +V+  M  +  +PS+++YN +++   + G  ++A ++   M+  G  P+  T+ + I
Sbjct: 94  EAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRI 153

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
             F R      A  L+ +M+  G +++A +Y  ++ G+ E+   VEA  L  +M+  G+ 
Sbjct: 154 KSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIF 213

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P ++T+N L++ LCK G V ++     ++L+K +  ++ ++N  + G CR G +  A  +
Sbjct: 214 PDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSM 273

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
            D +    L P VVTYNTLI GLC+  ++  A++    ++N G+ PD  TY  +++G CK
Sbjct: 274 LDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCK 333

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
           MG L  A +     + KG  PD F Y + I G  +  +   A  L    L KG  P +I 
Sbjct: 334 MGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVIL 393

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           YN+L+ GLC+ G + +A +++ +M  +G   D  TY  +I+   +MG +    +L N+ +
Sbjct: 394 YNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAI 453

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
            KG  P + T+  LI  +  + ++E      ++M   G+ P+VITYN+++NGL +  + +
Sbjct: 454 AKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNE 513

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
                F  M E+G +PNK TY IL    C AG   EAL L  E+L++ I PD  + + ++
Sbjct: 514 DLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATII 573



 Score =  279 bits (713), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 178/575 (30%), Positives = 281/575 (48%), Gaps = 19/575 (3%)

Query: 129 TILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSM 188
            I+ IL+ESG  + A+ V   +  V +  + DV          +I+I       + +   
Sbjct: 116 AIMNILVESGYFKQAHKVFLRMKNVGI--VPDVYT-------FTIRIKS-----FCRTKR 161

Query: 189 VEQCLLVFNKMLRNGL-LPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
               L + N M+  G  L  V  C  +     +N + V+A E++  M   GI P + T+N
Sbjct: 162 PHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEEN-YRVEAYELFNDMLRIGIFPDVSTFN 220

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
            +L + CK+GE+QE+  LL ++  +G   N  T+N+ I G  R G L  A  ++  +++ 
Sbjct: 221 KLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIRE 280

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           GL     +YN +ICG  +   +VEA     ++V  G+ P   TYN LI G CK G + +A
Sbjct: 281 GLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNA 340

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
                  + K  +PD  +Y +L+ G C++  I  A  LF+    + L PTV+ YN LI G
Sbjct: 341 EKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKG 400

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           LC+ G +  A Q+   M   G   D+ TY +++NG CKMG +S A    N+ + KG  PD
Sbjct: 401 LCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPD 460

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
            F + T I G  K        ++  +M + G  PD+ITYN +++GL K    E+  E   
Sbjct: 461 VFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFE 520

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
            MV  G +P+ ITY  +  +  + G +    DL + +L KG++P  V++  +I   A  G
Sbjct: 521 TMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNG 580

Query: 608 RLELAFMYFSEM--QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
            L+ A+  F  M  Q K +     TYN +IN       +     LF++M   G  P+ YT
Sbjct: 581 DLKGAYQLFRRMGEQYK-VSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYT 639

Query: 666 YTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
           Y ++I+  C  GN     +   EM+++   P   T
Sbjct: 640 YRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTT 674



 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 169/571 (29%), Positives = 272/571 (47%), Gaps = 19/571 (3%)

Query: 94  VRVLNRIREK-PRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVC 152
           +R+ +  R K P  ALR    + +Q G + +   +CT++    E      AY +   ++ 
Sbjct: 151 IRIKSFCRTKRPHSALRLLNNMVSQ-GCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLR 209

Query: 153 VNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCN 212
           +   GI              +   + LL    KK  V++   + NK+L+ G+  ++   N
Sbjct: 210 I---GIFP-----------DVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFN 255

Query: 213 RIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR 272
             I+ L   G    A  +   +   G+ P +VTYNT++   CK   + EA + L ++   
Sbjct: 256 IFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNG 315

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA 332
           G  P+G TYN LI G+ + G L+ A  +++  +  G      +Y  +I G  +   +  A
Sbjct: 316 GLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRA 375

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
           L L    + +G+ PT+  YN+LI GLC+ G +  A     EM       DI +YN ++ G
Sbjct: 376 LALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVING 435

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
            C+ G + +A  L ++  ++  VP V T+NTLIDG C+   +E   Q+   M + G+ PD
Sbjct: 436 LCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPD 495

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
           VITY  ++NG  K        E F  M+ KG  P++  Y        K G  +EA  L +
Sbjct: 496 VITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVD 555

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT--YTSIIHASLE 570
           E+L KG  PD +++  ++ G    G L+ A +L R+M G+ +   H T  Y  +I+A  E
Sbjct: 556 EILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRM-GEQYKVSHTTATYNIMINAFAE 614

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
             DL  G  LF  M   G +P   TY V+I      G  +  + +  EM  KG  P++ T
Sbjct: 615 KLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTT 674

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
           +  +IN LC   R+ +A  +   M   GI+P
Sbjct: 675 FGRVINCLCVQHRVHEAVDIIHFMVHNGIVP 705



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 130/471 (27%), Positives = 224/471 (47%), Gaps = 26/471 (5%)

Query: 117 QPGVKRDEFVFCTILEILIESGLLRSAYWVVETVV------------------CVNMHGI 158
           + G+  + F F   ++ L   G+L  A  ++++V+                  C N + +
Sbjct: 244 KKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVV 303

Query: 159 -----LDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNR 213
                L  L+ GGL         + L+  Y K  M++    +    +  G +PD      
Sbjct: 304 EAEKYLHKLVNGGLEP--DGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCS 361

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
           +I  L  N    +A  ++      G+KP+++ YN ++   C+EG + +AL+++ EM   G
Sbjct: 362 LINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENG 421

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
           CS +  TYN++I G  + G +  A  L+ D +  G      ++N +I GY ++  +   +
Sbjct: 422 CSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTI 481

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
            +  +M + GV P + TYN ++ GL K  +  D    F  M+ K  +P+ I+YN L    
Sbjct: 482 QILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESL 541

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ-GILPD 452
           C++G + EA  L DE+ ++ + P  V++ T+I G    GDL+ A QL   M  Q  +   
Sbjct: 542 CKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHT 601

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
             TY IM+N   +  +L M  + F EM   G  PD + Y   I G    G+T   Y+   
Sbjct: 602 TATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLL 661

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
           EM+ KGF P L T+  +++ LC    + EA +++  MV +G +P+ +   S
Sbjct: 662 EMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEVVNSIS 712



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 159/313 (50%)

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
           Y R G + EA  +F+ +   N  P+V++YN +++ L   G  + A ++   M N GI+PD
Sbjct: 86  YGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPD 145

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
           V T+TI +   C+      A    N M+ +G Q +  AY T +AG  +     EAY L  
Sbjct: 146 VYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFN 205

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           +ML  G  PD+ T+N L+H LCK G ++E+  LL K++  G   +  T+   I      G
Sbjct: 206 DMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKG 265

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
            L     + ++++R+GL+P +VTY  LI        +  A  Y  ++   G+ P+  TYN
Sbjct: 266 MLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYN 325

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
            LI+G C++  +  A  +      +G +P+++TY  LIN  C       AL L+   L +
Sbjct: 326 TLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGK 385

Query: 693 EIEPDYCTHSALL 705
            ++P    ++ L+
Sbjct: 386 GLKPTVILYNMLI 398



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 108/228 (47%), Gaps = 2/228 (0%)

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
           G   EA  + E M      P +++YN +++ L + G  ++A+++  +M   G +PD  T+
Sbjct: 90  GKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTF 149

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY-TVLIHAHAARGRLELAFMYFSEMQ 620
           T  I +            L NNM+ +G     V Y TV+   +    R+E A+  F++M 
Sbjct: 150 TIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVE-AYELFNDML 208

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
             GI P+V T+N L++ LC+   + ++  L   + ++G+  N +T+ I I   C  G   
Sbjct: 209 RIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLS 268

Query: 681 EALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLGA 728
            A+ +   ++   + PD  T++ L+         V A +YL  L  G 
Sbjct: 269 GAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGG 316


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  295 bits (756), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 173/530 (32%), Positives = 281/530 (53%), Gaps = 7/530 (1%)

Query: 191 QCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTML 250
           Q    F+ M+R+  +P + + NR++  L       +   +Y  M   G+ P + T + + 
Sbjct: 74  QAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILA 133

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
           +  C    + EAL  +  +  RG  PN VTY  LI G      + +A  L   M KLG  
Sbjct: 134 NCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCT 193

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG------VAPTLATYNILIYGLCKWGRV 364
            +A +Y  +I G  + G +  AL L +EM+           P + TY+I+I GLCK GR 
Sbjct: 194 PNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGRE 253

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            +A+  F EM  + +IPD+ISY+TL++G+C +G   ++  LFDE+  + + P +VT++ L
Sbjct: 254 DEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVL 313

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           ID LC+ G +  A++L E MI +GI+P++ITY  +++G C +G+L+ ARE F  M  KGL
Sbjct: 314 IDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGL 373

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
           +PD  +YTT I G  K     EA  L  EML  G  P++ TY  L+ GL + G + +A +
Sbjct: 374 EPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKK 433

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           L   M   G   +   Y   +    +   L    +LFN +        +  Y+ LI    
Sbjct: 434 LFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLC 493

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
             G+LE A+  F ++  +G++P+V+TYN +I+G C++ ++D A  LF  MEE G  P+  
Sbjct: 494 KAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDII 553

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYK 714
            Y  L+   C     +E ++L  +M+ +++ P+  +   +++  L KD K
Sbjct: 554 AYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAAS-CTIVVDMLCKDEK 602



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 157/501 (31%), Positives = 262/501 (52%), Gaps = 6/501 (1%)

Query: 191 QCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTML 250
           Q   ++N+M   GL PD+   + +   L +     +A      +   G  P++VTY T++
Sbjct: 109 QLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLI 168

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK---- 306
              C E  + EA  L   MQ  GC+PN VTY  LI G  + G +  A  L ++ML     
Sbjct: 169 KGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQ 228

Query: 307 --LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
             +  K    +Y+ II G  + G   EA  L EEM  +G+ P + +Y+ LI+G C  G+ 
Sbjct: 229 YGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKW 288

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
             ++H F EM+ + V PD+++++ L+   C+ G + EA  L + +  R +VP ++TYN+L
Sbjct: 289 DQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSL 348

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           IDG C  GDL  A++L  +M ++G+ PD I+YT ++NG CK   +  A   +NEML+ G 
Sbjct: 349 IDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGK 408

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            P+   Y T + G  + G   +A +L   M   G   +   Y + + GLCK   L EA E
Sbjct: 409 SPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAME 468

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           L  ++    F  +   Y+ +I    + G L    +LF  + ++GL P +VTY ++IH   
Sbjct: 469 LFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFC 528

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
             G+++ A + F +M+  G  P++I YN L+ G C   ++++   L   M ++ + PN  
Sbjct: 529 KVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAA 588

Query: 665 TYTILINENCNAGNWQEALRL 685
           + TI+++  C    +++ + L
Sbjct: 589 SCTIVVDMLCKDEKYKKFVDL 609



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 141/472 (29%), Positives = 242/472 (51%), Gaps = 10/472 (2%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V + L     +LR G +P+V     +IK L       +A  ++  M + G  P+ VTY T
Sbjct: 142 VSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGT 201

Query: 249 MLDSFCKEGEMQEALELLWEM------QGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           ++   C+ G +  AL+L  EM       G  C P  +TY+++I G  + G  ++A+ L  
Sbjct: 202 LIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFE 261

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M   G+     SY+ +I G+   G   ++ +L +EMV +GV P + T+++LI  LCK G
Sbjct: 262 EMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEG 321

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           +V++A+     M+++ ++P++I+YN+L+ G+C  G++  A  LF  + S+ L P  ++Y 
Sbjct: 322 KVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYT 381

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           TLI+G C+   ++ A  L   M+  G  P+V TY  ++ G  + G +  A++ F  M   
Sbjct: 382 TLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTY 441

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G+  +   Y   + G  K     EA  L  E+ +  F  ++  Y+ L+ GLCK G LE A
Sbjct: 442 GVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETA 501

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            EL  K+  +G  PD +TY  +IH   ++G +     LF  M   G +P ++ Y  L+  
Sbjct: 502 WELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCG 561

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
                +LE       +M  K + PN  +   +++ LC+    D+ Y  F+D+
Sbjct: 562 FCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCK----DEKYKKFVDL 609



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 126/354 (35%), Positives = 195/354 (55%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F +M   G++PDV + + +I      G   +++ ++  M + G++P +VT++ ++D+ C
Sbjct: 259 LFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLC 318

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           KEG++ EA +LL  M  RG  PN +TYN LI GF   G+L  AR L   M   GL+    
Sbjct: 319 KEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEI 378

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           SY  +I GY +   + EA+NL  EM+  G +P + TY  L+ GL + G+V DA+  F  M
Sbjct: 379 SYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVM 438

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
               V  +   Y   L G C++  + EA  LF+EL+S N    +  Y+ LIDGLC+ G L
Sbjct: 439 KTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKL 498

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           E A +L E +  +G+ PDV+TY IM++G CK+G +  A   F +M   G  PD  AY T 
Sbjct: 499 ETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTL 558

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
           + G  +     E  +L  +M+ K   P+  +  ++V  LCK    ++  +LL K
Sbjct: 559 LCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLLPK 612



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 122/401 (30%), Positives = 196/401 (48%), Gaps = 41/401 (10%)

Query: 330 VEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTL 389
           ++A +  + M+     P ++++N L+ GL K    S     + EM    + PD+ + + L
Sbjct: 73  IQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSIL 132

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL------------------------- 424
               C    + EA      +  R  +P VVTY TL                         
Sbjct: 133 ANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGC 192

Query: 425 ----------IDGLCRYGDLEVAQQLKENMINQG------ILPDVITYTIMVNGSCKMGN 468
                     I GLC+ G++ +A +L + M+N          P VITY+I+++G CK+G 
Sbjct: 193 TPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGR 252

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
              A+E F EM  +G+ PD  +Y+T I G    G   ++  L +EM+ +G  PD++T++V
Sbjct: 253 EDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSV 312

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           L+  LCK G + EA +LL  M+  G +P+ ITY S+I     +GDL   R+LF +M  KG
Sbjct: 313 LIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKG 372

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
           L P  ++YT LI+ +    +++ A   ++EM   G  PNV TY  L+ GL +  ++  A 
Sbjct: 373 LEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAK 432

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
            LF  M+  G+  N   Y I ++  C      EA+ L+ E+
Sbjct: 433 KLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNEL 473



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 107/213 (50%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K   V++ + ++N+ML+ G  P+V     ++K L   G    A++++ +M  +G+  +
Sbjct: 387 YCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSAN 446

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
              Y   LD  CK   + EA+EL  E++      N   Y+ LI G  + G+LE A  L  
Sbjct: 447 SQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFE 506

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            + + GL+    +YN +I G+ + G +  A  L E+M   G  P +  YN L+ G C+  
Sbjct: 507 KLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGN 566

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
           ++ +      +M++K+V P+  S   ++   C+
Sbjct: 567 KLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCK 599


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  295 bits (756), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 203/713 (28%), Positives = 336/713 (47%), Gaps = 89/713 (12%)

Query: 104 PRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWV--------VETVVCVNM 155
           P+ AL FF +V      +     +C ++ +L+ + LL  A  +        V      N 
Sbjct: 100 PKTALNFFHFVSETCKFRFTARSYCVLIHLLVGNDLLSPARLLLIRLIDGKVPAFYARNF 159

Query: 156 HG----ILDVLIGGGL--SSCVSIKILDLLLLIYT---KKSMVEQCLLVFNKMLRNGLLP 206
                 I  ++    L     + +KI DLL+ +Y+   K         VF+ + + GL P
Sbjct: 160 ESRHFEIAQIMADFNLVFEPVIGVKIADLLVHVYSTQFKHLGFGFAADVFSLLAKKGLFP 219

Query: 207 DVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELL 266
            +K C  ++  L       K+ EVY  +   GI P +  ++TM+++FCK     +A+ L 
Sbjct: 220 SLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGLF 279

Query: 267 WEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEK 326
            +M+  G +PN VTYN +I G  ++G L++A      M+K  +  S  +Y+  I G  + 
Sbjct: 280 SKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKL 339

Query: 327 GLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISY 386
             + EA  + +EM   G  P    YN LI G CK G +S+A     +ML K + P+ ++ 
Sbjct: 340 EKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTL 399

Query: 387 NTLLYGYCRSGNIGEAFLLFDELRSR---------------------------------- 412
           N+L+ G+C+S  IG+A  + +E+  R                                  
Sbjct: 400 NSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLL 459

Query: 413 -NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
            NL P      TL+ GLC+ G    A +L   ++ +G +P+++T   +++G CK GN+  
Sbjct: 460 RNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQE 519

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
             +   +ML +GL  DR  Y T I+G  K G   E + L+EEM+ KG  PD+ T+N+L+H
Sbjct: 520 TLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLH 579

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           GLC    ++EA+ L  +   +G++P+  TY  +I    +   +  G +L N ++ K L  
Sbjct: 580 GLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLEL 639

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
             V Y  LI A+   G +  AF    +M+ +G+  +  TY++L++GLC +  +D A  L 
Sbjct: 640 NSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLL 699

Query: 652 IDMEEEGILPN-----------------------------------KYTYTILINENCNA 676
            +M +EG+LPN                                   K+TYTI+I+  C  
Sbjct: 700 DEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKL 759

Query: 677 GNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKV-HAVEYLESLTLGA 728
           G  +EA +L  EM ++ I PD  T++A     L K+ KV  A +  + ++ GA
Sbjct: 760 GKTKEAAKLLNEMTEKGILPDAVTYNA-FTNGLCKEGKVEEAFKVCDEMSSGA 811



 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 193/690 (27%), Positives = 335/690 (48%), Gaps = 53/690 (7%)

Query: 61  LIISTVEEKPWAFCNNRWVSDHFQ--AVVSDPELLVRVLNRIREKPRIALRFFRWVETQP 118
           L+I  ++ K  AF    + S HF+   +++D  L+   +  ++    IA        TQ 
Sbjct: 142 LLIRLIDGKVPAFYARNFESRHFEIAQIMADFNLVFEPVIGVK----IADLLVHVYSTQ- 196

Query: 119 GVKRDEFVFCT-ILEILIESGL---LRSAYWVVETVVCVN----MHGILDVLIGGGLSSC 170
             K   F F   +  +L + GL   L++  +++ ++V  N     + + D +  GG+   
Sbjct: 197 -FKHLGFGFAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIP- 254

Query: 171 VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG-------- 222
             + +   ++  + K    +  + +F+KM + G+ P+V   N II  L  +G        
Sbjct: 255 -DVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRF 313

Query: 223 ---------------FSV------------KAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
                          +SV            +A  V + M E G  P+ V YNT++D +CK
Sbjct: 314 KEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCK 373

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
            G + EAL++  +M  +G SPN VT N LI GF ++ ++ QA  ++ +M+  GL ++  S
Sbjct: 374 MGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGS 433

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           ++ +I     K   V AL+   EM+ R + P       L+ GLCK G+  +A   +  +L
Sbjct: 434 FSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLL 493

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
            K  +P+I++ N L++G C++GN+ E   L  ++  R LV   +TYNTLI G C+ G ++
Sbjct: 494 GKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVK 553

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
              +LKE M+ +GI PD+ T+ ++++G C    +  A   ++E  + G  P+ + Y   I
Sbjct: 554 EGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMI 613

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
            G  K     E   L  E+++K    + + YN L+   C  G++  A  L   M   G +
Sbjct: 614 DGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVL 673

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
               TY+S++H    +G +   + L + M ++GL P +V YT +I  ++  G++    + 
Sbjct: 674 LSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIV 733

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
             EM    I PN  TY  +I+G C+L +  +A  L  +M E+GILP+  TY    N  C 
Sbjct: 734 LQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCK 793

Query: 676 AGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            G  +EA ++  EM    +  D  T++ L+
Sbjct: 794 EGKVEEAFKVCDEMSSGAVCLDEITYTTLI 823



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 152/576 (26%), Positives = 266/576 (46%), Gaps = 24/576 (4%)

Query: 85  AVVSDPELLVRVLNRIREKPR--IALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRS 142
            ++ D  L   ++N   +  R   A+  F  +E + GV  +   +  I+  L +SG L  
Sbjct: 251 GIIPDVHLFSTMINAFCKGHREDDAIGLFSKME-KLGVAPNVVTYNNIIHGLCKSGRLDE 309

Query: 143 AYWVVETVVCVNMHGIL---DVLIGGGL-------SSCVSIKILDL-----------LLL 181
           AY   E +V   +   L    V I G +       ++CV  ++ +L           L+ 
Sbjct: 310 AYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLID 369

Query: 182 IYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKP 241
            Y K   + + L + + ML  G+ P+    N +I+    +    +A  V   M   G+  
Sbjct: 370 GYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPI 429

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
           +  +++ +++  C +     AL  + EM  R   PN      L++G  + G+  +A  L 
Sbjct: 430 NQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELW 489

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
             +L  G   +  + N +I G  + G + E L L  +M+ RG+     TYN LI G CK 
Sbjct: 490 CRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKE 549

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           G+V +      EM++K + PDI ++N LL+G C +  I EA  L+ E +    VP V TY
Sbjct: 550 GKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTY 609

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
             +IDG C+   +E  + L   ++++ +  + + Y  ++   C  GN++ A    ++M  
Sbjct: 610 GVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKS 669

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
           +G+      Y++ + G   +G   +A  L +EM  +G  P+++ Y  ++ G  KLG + +
Sbjct: 670 RGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNK 729

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
            N +L++M      P+  TYT +I    ++G  +    L N M  KG+ P  VTY    +
Sbjct: 730 VNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTN 789

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
                G++E AF    EM    +  + ITY  LI+G
Sbjct: 790 GLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDG 825


>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
 gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
          Length = 892

 Score =  295 bits (755), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 171/557 (30%), Positives = 290/557 (52%), Gaps = 34/557 (6%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + +   +E  L + + ML    +P V +C+ ++  LR  G   KA  +   +GE G+ P+
Sbjct: 275 FCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPN 334

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +   N ++D  CK+   +EA  L   M  RG  PN VTY +LI    + G ++ A  +  
Sbjct: 335 LFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFD 394

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M + G++V+ + YN +I GY +     +A  L  EMV +G+AP+ A+Y+ LI GLC+ G
Sbjct: 395 RMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKG 454

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            ++ A     EM R  V  ++ ++ TL+ G+C+ GN+ EA  LFD++   ++VP  VT+N
Sbjct: 455 DLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFN 514

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            +I+G CR G++  A QL + M+++G+ PD  TY  +++  C       A+EF +++   
Sbjct: 515 VMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENN 574

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
            +  + F+ TT + G  K G  +E Y + +EM A+G   DLI++ V+V+   KL   E+ 
Sbjct: 575 CVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKI 634

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
           + L R+M   G  PD++ +T +I    +  ++ +  + ++ M+  G SP +VTYTVLI+ 
Sbjct: 635 SVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINH 694

Query: 603 HAARGRLELAFMYFSEMQV----------------------------------KGIRPNV 628
               G L  A +   EM V                                  +G   N 
Sbjct: 695 LCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVLHATILEGCLANT 754

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
           +T+N LI G C+  +I  A  L  +  E G  P+  +Y+ +INE C  G+  +A +L+ E
Sbjct: 755 VTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNE 814

Query: 689 MLDREIEPDYCTHSALL 705
           ML + ++PD   ++ L+
Sbjct: 815 MLYKGLKPDIVAYNILI 831



 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 163/532 (30%), Positives = 274/532 (51%), Gaps = 40/532 (7%)

Query: 203 GLLPDVKNCNRII-KVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQE 261
           G++P++  CN +I K+ +D  F  +A  ++R M   G++P+ VTY  ++ S CK G M +
Sbjct: 330 GMVPNLFACNALIDKLCKDRRFR-EAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDD 388

Query: 262 ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC 321
           AL +   M+ +G       YN LI G+ ++    QARGL+ +M++ GL  SA SY+P+I 
Sbjct: 389 ALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIA 448

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           G   KG L  A+ L  EM   GV+  + T+  LI G CK G + +A   F +M+  +V+P
Sbjct: 449 GLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVP 508

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID--------------- 426
           + +++N ++ GYCR GN+ +AF L+D++  R L P   TY +LI                
Sbjct: 509 NEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFV 568

Query: 427 --------------------GLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
                               G C+ G L     + + M  +G+  D+I++T++V  + K+
Sbjct: 569 DDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKL 628

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
            +       F EM  KG++PD   +T  I    K  +  +A    ++M+A G  P+++TY
Sbjct: 629 HDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTY 688

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
            VL++ LCK G L  A  L  +M+   F+P+  TY   +      G+L + + L   +L 
Sbjct: 689 TVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVLHATILE 748

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
             L+ T VT+  LI      G+++ A          G  P+ I+Y+ +IN LC++  I++
Sbjct: 749 GCLANT-VTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINK 807

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCN-AGNWQEALRLYKEMLDREIEPD 697
           A+ L+ +M  +G+ P+   Y ILI   CN  G + + L +Y +M++ +   D
Sbjct: 808 AFQLWNEMLYKGLKPDIVAYNILIRW-CNIHGEFDKGLGIYSDMVNLKYADD 858



 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 143/502 (28%), Positives = 263/502 (52%), Gaps = 2/502 (0%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           AR +   M   G+K S V YN ++   C+   + EA+E+   M  RG   + VTY  L+ 
Sbjct: 214 ARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVY 273

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           GF R  ELE A  +  DML L    S  S + ++ G  ++G + +A  L   +   G+ P
Sbjct: 274 GFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVP 333

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
            L   N LI  LCK  R  +A   F  M  + + P+ ++Y  L++  C+ G + +A  +F
Sbjct: 334 NLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMF 393

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
           D +R + +  TV  YN+LI+G C++ +   A+ L   M+ +G+ P   +Y+ ++ G C+ 
Sbjct: 394 DRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRK 453

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G+L+ A E   EM R G+  + + +TT I+G  K G+  EA RL ++M+     P+ +T+
Sbjct: 454 GDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTF 513

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA-SLEMGDLRRGRDLFNNML 585
           NV++ G C++G++ +A +L  +MV  G  PD+ TY S+I    L +G ++  ++  +++ 
Sbjct: 514 NVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMK-AKEFVDDLE 572

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
              +     + T L++     GRL   +  + EM+ +G++ ++I++  ++    +L   +
Sbjct: 573 NNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGE 632

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +   LF +M+E+G+ P+   +T +I+ +    N  +AL  + +M+     P+  T++ L+
Sbjct: 633 KISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLI 692

Query: 706 LKQLDKDYKVHAVEYLESLTLG 727
                  Y   A    E + +G
Sbjct: 693 NHLCKSGYLSSAQILCEEMLVG 714



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 141/498 (28%), Positives = 240/498 (48%), Gaps = 4/498 (0%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A +V R+    GI     T + +L +  K  +   A +L  EM       +   Y   I 
Sbjct: 144 AADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIR 203

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
            +     L+ ARGL+  M   G+K SA  YN ++ G      ++EA+ ++  MV RG+  
Sbjct: 204 AYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVA 263

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
              TY  L+YG C+   +  A     +ML  + +P + S + ++ G  + G+I +AF L 
Sbjct: 264 DEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLA 323

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
             L    +VP +   N LID LC+      A++L   M N+G+ P+ +TY I+++  CK 
Sbjct: 324 CHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKR 383

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G +  A   F+ M  KG++   + Y + I G  +  +  +A  L  EM+ KG  P   +Y
Sbjct: 384 GMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASY 443

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           + L+ GLC+ G L  A EL R+M  +G   +  T+T++I    + G++     LF+ M+ 
Sbjct: 444 SPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMID 503

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
             + P  VT+ V+I  +   G +  AF  + +M  +G+ P+  TY +LI+ LC      +
Sbjct: 504 SSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMK 563

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
           A     D+E   ++ N ++ T L+   C  G   E   ++ EM  R ++ D  + + ++ 
Sbjct: 564 AKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVY 623

Query: 707 KQLDKDYKVHAVEYLESL 724
             L    K+H  E +  L
Sbjct: 624 AAL----KLHDGEKISVL 637



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 134/516 (25%), Positives = 233/516 (45%), Gaps = 51/516 (9%)

Query: 105 RIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIG 164
           R A R FR +  + G++ +E  +  ++  L + G++  A       +C     + D +  
Sbjct: 352 REAERLFRGMANR-GLEPNEVTYAILIHSLCKRGMMDDA-------LC-----MFDRMRE 398

Query: 165 GGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS 224
            G+   V++   + L+  Y +     Q   + N+M+  GL P   + + +I  L   G  
Sbjct: 399 KGIR--VTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDL 456

Query: 225 VKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVL 284
             A E++R M   G+  ++ T+ T++  FCK+G M EA  L  +M      PN VT+NV+
Sbjct: 457 ASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVM 516

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC----------------------- 321
           I G+ R G + +A  L   M+  GL    ++Y  +I                        
Sbjct: 517 IEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCV 576

Query: 322 ------------GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
                       G+ ++G L E  ++ +EM  RGV   L ++ +++Y   K         
Sbjct: 577 VLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISV 636

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
            F EM  K V PD + +  ++  + +  NI +A   +D++ +    P VVTY  LI+ LC
Sbjct: 637 LFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLC 696

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
           + G L  AQ L E M+    LP+  TY   ++     G L  A+     +L +G   +  
Sbjct: 697 KSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVLHATIL-EGCLANTV 755

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
            + T I G  K G    A  L +     GF PD I+Y+ +++ LCK+G + +A +L  +M
Sbjct: 756 TFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEM 815

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           +  G  PD + Y  +I      G+  +G  ++++M+
Sbjct: 816 LYKGLKPDIVAYNILIRWCNIHGEFDKGLGIYSDMV 851


>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 794

 Score =  295 bits (755), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 174/547 (31%), Positives = 281/547 (51%), Gaps = 15/547 (2%)

Query: 126 VFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTK 185
            F  ++ +  + GL+  A     T + ++ H + DV       SC S      LL +  K
Sbjct: 103 AFSLVISVFADCGLVDRALEFYRTFIKIH-HCVPDVF------SCNS------LLNVLVK 149

Query: 186 KSMVEQCLLVFNKML-RNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
              VE    V+++M+ RNG + +   C  +  + ++       + + +  G  G  P+IV
Sbjct: 150 HGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGR-GCMPNIV 208

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
            YNT++D +CK+G+ + A  L  E++ +G  P   TY  +I GF + G+ E    L+ +M
Sbjct: 209 FYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEM 268

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
            + GL VS H YN II    + G  +EA +    M+  G  P +ATYNILI G C  G V
Sbjct: 269 SERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEV 328

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
             A     + +++ ++P+ +SY  L++ YC+ G    A  L  ++  R   P +VTY  L
Sbjct: 329 HKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAAL 388

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           I GL   G+++VA  ++  M+ +G+LPD   Y ++++G CK G L  A+    EML + +
Sbjct: 389 IHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNV 448

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            PD F   T + G ++ GD  EA +L E  + KG  P ++ YN ++ G CK G +++A  
Sbjct: 449 APDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALL 508

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
             ++M+     PD  TY++II   ++M DL     +F  M++    P +VTYT+LI+   
Sbjct: 509 CFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFC 568

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
             G +  A   F +M    ++PNV+TY  LI   C+   + +A   F  M  E  LPN  
Sbjct: 569 LSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDV 628

Query: 665 TYTILIN 671
           TY  L+N
Sbjct: 629 TYNYLMN 635



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 158/529 (29%), Positives = 256/529 (48%), Gaps = 1/529 (0%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLR-NGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           L++ ++    +V++ L  +   ++ +  +PDV +CN ++ VL  +G    A +VY  M +
Sbjct: 106 LVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVLVKHGKVEIACKVYDEMVD 165

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
              +    T   M+   CKEG++++  +L+ +  GRGC PN V YN LI G+ + G+ E+
Sbjct: 166 RNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCKKGDTER 225

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  L +++   G   +  +Y  II G+ +KG       L  EM  RG+  ++  YN +I 
Sbjct: 226 ANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIID 285

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
              K G   +A      M++    PD+ +YN L+ G C  G + +A  L ++   R L+P
Sbjct: 286 AQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLP 345

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
             V+Y  LI   C+ G+   A  L   M  +G  PD++TY  +++G    G + +A    
Sbjct: 346 NKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVR 405

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           N+M+ KG+ PD   Y   ++G  K G    A  L  EML +   PD      LV G  + 
Sbjct: 406 NKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRH 465

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G  EEA +L    +  G  P  + Y ++I    + G ++     F  M++   SP   TY
Sbjct: 466 GDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTY 525

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
           + +I  +     L  A   F  M     +PNV+TY  LING C    I++A   F  M  
Sbjct: 526 STIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLS 585

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             + PN  TYTILI   C   N  +A   +++ML  +  P+  T++ L+
Sbjct: 586 LRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLM 634



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 144/552 (26%), Positives = 232/552 (42%), Gaps = 127/552 (23%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR-----EVYRMMGEF 237
           Y KK   E+  ++F ++   G LP VK    II     NGF  K +     ++   M E 
Sbjct: 217 YCKKGDTERANVLFKELKMKGFLPTVKTYGAII-----NGFCKKGKFEVVDKLLVEMSER 271

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G+  SI  YN ++D+  K G   EA + +  M   GC P+  TYN+LITG    GE+ +A
Sbjct: 272 GLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKA 331

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL---------------------- 335
             L+   +K GL  +  SY P+I  Y ++G  + AL+L                      
Sbjct: 332 EQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHG 391

Query: 336 -------------EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
                          +MV +GV P    YN+L+ GLCK GR+  A+    EML +NV PD
Sbjct: 392 LIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPD 451

Query: 383 -----------------------------------IISYNTLLYGYCRSGNIGEAFLLFD 407
                                              ++ YN ++ GYC+ G + +A L F 
Sbjct: 452 AFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFK 511

Query: 408 ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG 467
            +      P   TY+T+IDG  +  DL  A ++   M+     P+V+TYT+++NG C  G
Sbjct: 512 RMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSG 571

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
           +++ A + F +ML   L+P+   YT  I    K  + ++A    E+ML +   P+ +TYN
Sbjct: 572 DINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYN 631

Query: 528 VLVHGL-----------------------------------------------CKLGSLE 540
            L++GL                                               C+   ++
Sbjct: 632 YLMNGLTNNVDFVISNQRSEQTENSLVLESFGMMISDGWDRRAASYNSILICLCQHKMVK 691

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
            A  L  KM+  GF+PD ++  +++H     G  +   ++ +  L +      V Y+  +
Sbjct: 692 HALHLRDKMMSKGFLPDPVSLVALLHGLCLEGRSQDWNNVISCKLNERELQVAVKYSEKL 751

Query: 601 HAHAARGRLELA 612
            A  ++G+   A
Sbjct: 752 DAFLSQGQTSEA 763



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 133/267 (49%), Gaps = 9/267 (3%)

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR-KGLQPDRFAYTTQIAGELKLG 502
           M ++ ++P    ++++++     G +  A EF+   ++     PD F+  + +   +K G
Sbjct: 92  MKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVLVKHG 151

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
               A ++ +EM+ +    D  T  ++V GLCK G +E+  +L+ K  G G +P+ + Y 
Sbjct: 152 KVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYN 211

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
           ++I    + GD  R   LF  +  KG  PT+ TY  +I+    +G+ E+      EM  +
Sbjct: 212 TLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSER 271

Query: 623 GIRPNVITYNALINGL----CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGN 678
           G+  ++  YN +I+      CR+   D   G  I   + G  P+  TY ILI  +C+ G 
Sbjct: 272 GLDVSIHIYNNIIDAQFKHGCRIEAADTV-GWMI---KSGCDPDMATYNILITGSCSCGE 327

Query: 679 WQEALRLYKEMLDREIEPDYCTHSALL 705
             +A +L ++ + R + P+  +++ L+
Sbjct: 328 VHKAEQLLEQAIKRGLLPNKVSYTPLI 354



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 108/242 (44%), Gaps = 12/242 (4%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K + +   L +F  M++    P+V     +I     +G   +A + ++ M    +KP+
Sbjct: 532 YIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPN 591

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL-------- 294
           +VTY  ++  FCK   + +A     +M    C PN VTYN L+ G + N +         
Sbjct: 592 VVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTNNVDFVISNQRSE 651

Query: 295 EQARGLIRD----MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
           +    L+ +    M+  G    A SYN I+    +  ++  AL+L ++M+++G  P   +
Sbjct: 652 QTENSLVLESFGMMISDGWDRRAASYNSILICLCQHKMVKHALHLRDKMMSKGFLPDPVS 711

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
              L++GLC  GR  D  +     L +  +   + Y+  L  +   G   EA L+   L 
Sbjct: 712 LVALLHGLCLEGRSQDWNNVISCKLNERELQVAVKYSEKLDAFLSQGQTSEASLILHSLA 771

Query: 411 SR 412
            +
Sbjct: 772 DQ 773



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/253 (20%), Positives = 115/253 (45%), Gaps = 4/253 (1%)

Query: 471 MAREFFNEMLRK---GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
           M  EFF+   ++   G   + F+ ++ +    +    SE   L + M +K   P    ++
Sbjct: 46  MGLEFFHWASKQSNCGNYLNEFSCSSLLRLLARRRLFSEVESLLKIMKSKDLMPTREAFS 105

Query: 528 VLVHGLCKLGSLEEANELLRKMVG-DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           +++      G ++ A E  R  +     +PD  +  S+++  ++ G +     +++ M+ 
Sbjct: 106 LVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVLVKHGKVEIACKVYDEMVD 165

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
           +       T  +++      G++E  +    +   +G  PN++ YN LI+G C+    ++
Sbjct: 166 RNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCKKGDTER 225

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
           A  LF +++ +G LP   TY  +IN  C  G ++   +L  EM +R ++     ++ ++ 
Sbjct: 226 ANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIID 285

Query: 707 KQLDKDYKVHAVE 719
            Q     ++ A +
Sbjct: 286 AQFKHGCRIEAAD 298


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  295 bits (755), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 175/536 (32%), Positives = 270/536 (50%), Gaps = 40/536 (7%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P  K+ N ++ +L D      A  V+  M   G+ P++ T+  ++ + C   E+  A  L
Sbjct: 168 PTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSL 227

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           L +M   GC PN V Y  LI     N  + +A  L+ DM  +  +    ++N +I G   
Sbjct: 228 LRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCR 287

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
            G + EA  L + M+ RG +    TY  L++GLC+ G+V +AR     +L K   P+ + 
Sbjct: 288 AGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEAR----ALLNKIPNPNTVL 343

Query: 386 YNTLLYGYCRSGNIGEAF-LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
           YNTL+ GY  SG   EA  LL++ +      P   T+N +IDGL + G L  A +L   M
Sbjct: 344 YNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEM 403

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
           + +   P+VITYTI++NG CK G L  A E  N M  KGL  +   Y   I    K G+ 
Sbjct: 404 VAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNI 463

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
            EA +L  EM  KG  PD+ T+N L++GLCK   +EEA  L   M  +G I + +TY ++
Sbjct: 464 EEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTL 523

Query: 565 IHASL-----------------------------------EMGDLRRGRDLFNNMLRKGL 589
           +HA L                                   + G + +G  LF  ML KG+
Sbjct: 524 VHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGI 583

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
            PT+++  +LI      G++  A  +  +M  +G+ P+++TYN+LINGLC++  + +A  
Sbjct: 584 FPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASN 643

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           LF  ++ EGI P+  TY  LI+ +C+ G + +A  L  + +D    P+  T S L+
Sbjct: 644 LFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILI 699



 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 178/571 (31%), Positives = 271/571 (47%), Gaps = 55/571 (9%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK--------------------ARE 229
           + C L+ +K+   G + D K   +++K ++D G   K                     R 
Sbjct: 100 DACYLLIDKL---GAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRL 156

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           +  M G +   P+  +YN +LD        + A  + ++M  RG SP   T+ V++    
Sbjct: 157 LLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALC 216

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
              E++ A  L+RDM K G   ++  Y  +I    E   + EAL L E+M      P + 
Sbjct: 217 MVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQ 276

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           T+N +I+GLC+ GR+ +A      ML +    D ++Y  L++G CR G + EA  L +++
Sbjct: 277 TFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKI 336

Query: 410 RSRNLV--------------------------------PTVVTYNTLIDGLCRYGDLEVA 437
            + N V                                P   T+N +IDGL + G L  A
Sbjct: 337 PNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSA 396

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
            +L   M+ +   P+VITYTI++NG CK G L  A E  N M  KGL  +   Y   I  
Sbjct: 397 LELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICA 456

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
             K G+  EA +L  EM  KG  PD+ T+N L++GLCK   +EEA  L   M  +G I +
Sbjct: 457 LCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIAN 516

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
            +TY +++HA L    +++   L + ML +G     +TY  LI A    G +E     F 
Sbjct: 517 TVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFE 576

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
           EM  KGI P +I+ N LI+GLCR  +++ A     DM   G+ P+  TY  LIN  C  G
Sbjct: 577 EMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMG 636

Query: 678 NWQEALRLYKEMLDREIEPDYCTHSALLLKQ 708
           + QEA  L+ ++    I PD  T++ L+ + 
Sbjct: 637 HVQEASNLFNKLQSEGIRPDAITYNTLISRH 667



 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 154/486 (31%), Positives = 251/486 (51%), Gaps = 5/486 (1%)

Query: 187 SMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTY 246
           S V+    +   M ++G +P+      +I  L +N    +A ++   M     +P + T+
Sbjct: 219 SEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTF 278

Query: 247 NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
           N ++   C+ G + EA +LL  M  RG S + +TY  L+ G  R G++++AR L+  +  
Sbjct: 279 NDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPN 338

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNL-EEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
               +    YN +I GY   G   EA +L    MV  G  P   T+NI+I GL K G + 
Sbjct: 339 PNTVL----YNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLV 394

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
            A     EM+ K   P++I+Y  L+ G+C+ G + EA  + + + ++ L    V YN LI
Sbjct: 395 SALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLI 454

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
             LC+ G++E A QL   M  +G  PD+ T+  ++NG CK   +  A   +++M  +G+ 
Sbjct: 455 CALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVI 514

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
            +   Y T +   L      +A++L +EML +G P D ITYN L+  LCK G++E+   L
Sbjct: 515 ANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGL 574

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
             +M+G G  P  I+   +I      G +        +M+ +GL+P +VTY  LI+    
Sbjct: 575 FEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCK 634

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
            G ++ A   F+++Q +GIRP+ ITYN LI+  C     + A  L     + G +PN+ T
Sbjct: 635 MGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVT 694

Query: 666 YTILIN 671
           ++ILIN
Sbjct: 695 WSILIN 700



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 110/342 (32%), Positives = 190/342 (55%)

Query: 194 LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
           L++N M+  G  PD    N +I  L   G+ V A E+   M     +P+++TY  +++ F
Sbjct: 363 LLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGF 422

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           CK+G ++EA E++  M  +G S N V YN LI    ++G +E+A  L  +M   G K   
Sbjct: 423 CKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDI 482

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
           +++N +I G  +   + EAL+L  +M   GV     TYN L++       +  A     E
Sbjct: 483 YTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDE 542

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           ML +    D I+YN L+   C++G + +   LF+E+  + + PT+++ N LI GLCR G 
Sbjct: 543 MLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGK 602

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           +  A +  ++MI++G+ PD++TY  ++NG CKMG++  A   FN++  +G++PD   Y T
Sbjct: 603 VNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNT 662

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
            I+     G  ++A  L  + +  GF P+ +T+++L++ + K
Sbjct: 663 LISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVK 704



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 137/480 (28%), Positives = 221/480 (46%), Gaps = 11/480 (2%)

Query: 252 SFCKEGEMQEALELLWEMQGRGCSPNGVTYN-----VLITGFSRNGELEQARGLIRDMLK 306
             CK  E+   +    E+  R  +  G ++      +LI      G+ +    L++ M  
Sbjct: 68  QLCKLLELPLDIPTSMELFQRAGAQKGYSHTFDACYLLIDKLGAVGDFKVIEKLLKQMKD 127

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV-TRGVAPTLATYNILIYGLCKWGRVS 365
            GL      +  I+  Y + GL  +A  L  +M       PT  +YN+++  L       
Sbjct: 128 EGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDILVDGDCPR 187

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
            A + F++ML + V P + ++  ++   C    +  A  L  ++     VP  V Y TLI
Sbjct: 188 VAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLI 247

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
             LC    +  A QL E+M      PDV T+  +++G C+ G +  A +  + ML +G  
Sbjct: 248 HALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFS 307

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
            D   Y   + G  ++G   EA  L    L K   P+ + YN L+ G    G  EEA +L
Sbjct: 308 TDALTYGYLMHGLCRMGQVDEARAL----LNKIPNPNTVLYNTLISGYVASGRFEEAKDL 363

Query: 546 L-RKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           L   MV  G+ PD  T+  +I   ++ G L    +L N M+ K   P ++TYT+LI+   
Sbjct: 364 LYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFC 423

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
            +GRLE A    + M  KG+  N + YN LI  LC+   I++A  LF +M  +G  P+ Y
Sbjct: 424 KQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIY 483

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           T+  LIN  C     +EAL LY +M    +  +  T++ L+   L +D    A + ++ +
Sbjct: 484 TFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEM 543



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 106/206 (51%), Gaps = 6/206 (2%)

Query: 160 DVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLR 219
           D+ + G +++ V+    + L+  +  +  ++Q   + ++ML  G   D    N +IK L 
Sbjct: 507 DMFLEGVIANTVT---YNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALC 563

Query: 220 DNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGV 279
             G   K   ++  M   GI P+I++ N ++   C+ G++ +AL+ L +M  RG +P+ V
Sbjct: 564 KTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIV 623

Query: 280 TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
           TYN LI G  + G +++A  L   +   G++  A +YN +I  +  +G+  +A  L  + 
Sbjct: 624 TYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKG 683

Query: 340 VTRGVAPTLATYNILIYGLCK---WG 362
           V  G  P   T++ILI  + K   WG
Sbjct: 684 VDSGFIPNEVTWSILINYIVKKIPWG 709


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  295 bits (754), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 174/516 (33%), Positives = 276/516 (53%), Gaps = 15/516 (2%)

Query: 201 RNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQ 260
           ++G   DV + N ++ +L  +G   +  +VY+ +   G  P++VT+  ++   CK G+  
Sbjct: 20  QDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAT 79

Query: 261 EALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII 320
            ALE L  +     +P+   +N LI G  ++G  +QA  L  +M    +     +YN +I
Sbjct: 80  RALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVI 139

Query: 321 CGYSEKGLLVEALNLEEEMVTRG--VAPTLATYNILI-YGLCKWGRVSDARHRFFEMLRK 377
            G  + G L +A  L EEM+ RG   AP + TYN LI  G+CK G V +A      M   
Sbjct: 140 SGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLA 199

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
              PD+I+YN++++  C +G + EA  +   L++ +  P +VT+NTL+DG C+ G L  A
Sbjct: 200 GPAPDVITYNSIIHALCVAGRVVEAAEI---LKTMSCSPDLVTFNTLLDGFCKAGMLPRA 256

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
            ++ E M  + ILPDVITYTI+VNG C++G + +A     E++R+G  PD  AYT+ + G
Sbjct: 257 LEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDG 316

Query: 498 ELKLGDTSEAYRLQEEMLAK---------GFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             K G+  EA++L +EM A+            P L TYN+++ GL K GS+ +A  L+  
Sbjct: 317 LCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISD 376

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           +V  G++PD +TY ++I    +   +R   DL + M   G  P  VT   ++      GR
Sbjct: 377 LVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGR 436

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           ++ A+    EM  K   PNV+ Y +LI+GLC+  R+D A  +   M  +G+  + + Y  
Sbjct: 437 VDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRK 496

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
           LI    + G   EA+ +Y EM+ R   PD  T   L
Sbjct: 497 LIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTL 532



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 171/583 (29%), Positives = 285/583 (48%), Gaps = 64/583 (10%)

Query: 99  RIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGI 158
           R   +P +A++FF W   Q G K D   +                            + +
Sbjct: 2   RRSSRPDLAIQFFDWAGEQDGYKHDVHSY----------------------------NHL 33

Query: 159 LDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL 218
           LD+L+  G                 T K        V+  +L +G  P++     +I+  
Sbjct: 34  LDILVKSGHQ-------------FRTGK--------VYKDLLHSGCSPNLVTFKILIRGN 72

Query: 219 RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNG 278
              G + +A E  R + EF + P +  +N ++    K+G   +A++L   M+    +P+ 
Sbjct: 73  CKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDI 132

Query: 279 VTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH--SYNPII-CGYSEKGLLVEALNL 335
            TYN +I+G  ++G LE+AR L+ +M++ G K +    +YN +I  G  + G + EAL +
Sbjct: 133 FTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEI 192

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
            + M   G AP + TYN +I+ LC  GRV +A      M   +  PD++++NTLL G+C+
Sbjct: 193 LDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLDGFCK 249

Query: 396 SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
           +G +  A  + +E+   N++P V+TY  L++GLCR G ++VA  L E ++ QG +PDVI 
Sbjct: 250 AGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIA 309

Query: 456 YTIMVNGSCKMGNLS---------MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSE 506
           YT +V+G CK G +           ARE   EM+   + P  F Y   + G +K G  S+
Sbjct: 310 YTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISK 369

Query: 507 AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
           A  L  +++A+G+ PD++TYN L+ GLCK   + EA +L  +M   G  P+ +T  S++ 
Sbjct: 370 AVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVF 429

Query: 567 ASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRP 626
               +G +     L   M RK  +P +V YT LI       R++ A +    M+ +G+  
Sbjct: 430 GLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVAL 489

Query: 627 NVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL 669
           +   Y  LI  +    R+ +A  ++ +M   G LP+  T   L
Sbjct: 490 DDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTL 532



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 151/484 (31%), Positives = 250/484 (51%), Gaps = 15/484 (3%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G K  + +YN +LD   K G      ++  ++   GCSPN VT+ +LI G  + G+  +A
Sbjct: 22  GYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRA 81

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
              +R + +  +    + +N +I G  + G   +A+ L E M +  V P + TYN +I G
Sbjct: 82  LEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISG 141

Query: 358 LCKWGRVSDARHRFFEMLRKN--VIPDIISYNTLL-YGYCRSGNIGEAFLLFDELRSRNL 414
           LCK G +  AR    EM+R+     PDI++YNTL+  G C+ G++ EA  + D ++    
Sbjct: 142 LCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGP 201

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P V+TYN++I  LC  G +  A ++ + M      PD++T+  +++G CK G L  A E
Sbjct: 202 APDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALE 258

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
              EM R+ + PD   YT  + G  ++G    A+ L EE++ +G+ PD+I Y  LV GLC
Sbjct: 259 VLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLC 318

Query: 535 KLGSLEEAN---------ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           K G +EEA+         E+L +MV    +P   TY  ++   ++ G + +   L ++++
Sbjct: 319 KSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLV 378

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
            +G  P +VTY  LI       R+  A     EM   G  PN +T  +++ GLCR+ R+D
Sbjct: 379 ARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVD 438

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            A+ L ++M  +   PN   YT LI+  C +    +A  +   M  + +  D   +  L+
Sbjct: 439 DAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLI 498

Query: 706 LKQL 709
           +  +
Sbjct: 499 VSMI 502


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  294 bits (753), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 200/667 (29%), Positives = 325/667 (48%), Gaps = 64/667 (9%)

Query: 78  WVSDHFQAVVSDPELLVRVLNRIREKP--RIALRFFRWVETQPGVKRDEFVFCTILEILI 135
           + S H  A+ S     V++L+ +R +P    ALR F     +P    +  ++  IL  L 
Sbjct: 38  FASPHSAALSSTD---VKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLG 94

Query: 136 ESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLI--YTKKSMVEQCL 193
            SG       ++E +                 SS   +     L+LI  Y +  + ++ L
Sbjct: 95  RSGSFDDMKKILEDMK----------------SSRCEMGTSTFLILIESYAQFELQDEIL 138

Query: 194 LVFNKMLRN-GLLPDVKNCNRIIKVLRDNGFSVKAREV-YRMMGEFGIKPSIVTYNTMLD 251
            V + M+   GL PD    NR++ +L D G S+K  E+ +  M  +GIKP + T+N ++ 
Sbjct: 139 SVVDWMIDEFGLKPDTHFYNRMLNLLVD-GNSLKLVEISHAKMSVWGIKPDVSTFNVLIK 197

Query: 252 SFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKV 311
           + C+  +++ A+ +L +M   G  P+  T+  ++ G+   G+L+ A  +   M++ G   
Sbjct: 198 ALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSW 257

Query: 312 SAHSYNPIICGYSEKGLLVEALNLEEEMVTR-GVAPTLATYNILIYGLCKWGRVSDARHR 370
           S  S N I+ G+ ++G + +ALN  +EM  + G  P   T+N L+ GLCK G V  A   
Sbjct: 258 SNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEI 317

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
              ML++   PD+ +YN+++ G C+ G + EA  + D++ +R+  P  VTYNTLI  LC+
Sbjct: 318 MDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCK 377

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF- 489
              +E A +L   + ++GILPDV T+  ++ G C   N  +A E F EM  KG +PD F 
Sbjct: 378 ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFT 437

Query: 490 ----------------------------------AYTTQIAGELKLGDTSEAYRLQEEML 515
                                              Y T I G  K   T EA  + +EM 
Sbjct: 438 YNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEME 497

Query: 516 AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLR 575
             G   + +TYN L+ GLCK   +E+A +L+ +M+ +G  PD  TY S++      GD++
Sbjct: 498 VHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIK 557

Query: 576 RGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALI 635
           +  D+   M   G  P +VTY  LI      GR+E+A      +Q+KGI      YN +I
Sbjct: 558 KAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVI 617

Query: 636 NGLCRLRRIDQAYGLFIDM-EEEGILPNKYTYTILINENCNAGN-WQEALRLYKEMLDRE 693
            GL R R+  +A  LF +M E+    P+  +Y I+    CN G   +EA+    E+L++ 
Sbjct: 618 QGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKG 677

Query: 694 IEPDYCT 700
             P++ +
Sbjct: 678 FVPEFSS 684



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 145/508 (28%), Positives = 245/508 (48%), Gaps = 49/508 (9%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P    Y  +L    + G   +  ++L +M+   C     T+ +LI  +++    ++   +
Sbjct: 81  PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSV 140

Query: 301 IRDML-KLGLKVSAHSYNPIICGYSEKGLLVEALNLE------EEMVTRGVAPTLATYNI 353
           +  M+ + GLK   H YN ++       LLV+  +L+       +M   G+ P ++T+N+
Sbjct: 141 VDWMIDEFGLKPDTHFYNRML------NLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNV 194

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           LI  LC+  ++  A     +M    ++PD  ++ T++ GY   G++  A  + +++    
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ-GILPDVITYTIMVNGSCKMGNLSMA 472
              + V+ N ++ G C+ G +E A    + M NQ G  PD  T+  +VNG CK G++  A
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHA 314

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
            E  + ML++G  PD + Y + I+G  KLG+  EA  + ++M+ +   P+ +TYN L+  
Sbjct: 315 IEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIST 374

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           LCK   +EEA EL R +   G +PD  T+ S+I       + R   +LF  M  KG  P 
Sbjct: 375 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPD 434

Query: 593 LVTYTVLIHAHAARGRLELAFMY-----------------------------------FS 617
             TY +LI +  ++G+L+ A                                      F 
Sbjct: 435 EFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFD 494

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
           EM+V G+  N +TYN LI+GLC+ RR++ A  L   M  EG  P+KYTY  L+   C  G
Sbjct: 495 EMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGG 554

Query: 678 NWQEALRLYKEMLDREIEPDYCTHSALL 705
           + ++A  + + M     EPD  T+  L+
Sbjct: 555 DIKKAADIVQAMTSNGCEPDIVTYGTLI 582



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 153/543 (28%), Positives = 238/543 (43%), Gaps = 102/543 (18%)

Query: 87  VSDPELLVRVLNRIRE-KPRIALRFFRWVETQP--GVKRDEFVFCTILEILIESGLLRSA 143
           VS   +L++ L R  + +P I +     +E  P  G+  DE  F T+++  IE G L  A
Sbjct: 189 VSTFNVLIKALCRAHQLRPAILM-----LEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243

Query: 144 YWVVETVV---CVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKML 200
             + E +V   C   +  ++V++ G                 + K+  VE  L    +M 
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHG-----------------FCKEGRVEDALNFIQEMS 286

Query: 201 -RNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEM 259
            ++G  PD    N ++  L   G    A E+  +M + G  P + TYN+++   CK GE+
Sbjct: 287 NQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEV 346

Query: 260 QEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR----------------- 302
           +EA+E+L +M  R CSPN VTYN LI+   +  ++E+A  L R                 
Sbjct: 347 KEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSL 406

Query: 303 ------------------DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
                             +M   G +    +YN +I     KG L EALN+ ++M   G 
Sbjct: 407 IQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGC 466

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
           A ++ TYN LI G CK  +  +A   F EM    V  + ++YNTL+ G C+S  + +A  
Sbjct: 467 ARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQ 526

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
           L D++      P   TYN+L+   CR GD++ A  + + M + G  PD++TY  +++G C
Sbjct: 527 LMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLC 586

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA-------- 516
           K G + +A +    +  KG+     AY   I G  +   T+EA  L  EML         
Sbjct: 587 KAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDA 646

Query: 517 -----------------------------KGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
                                        KGF P+  +  +L  GL  L S+EE    L 
Sbjct: 647 VSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTL-SMEETLVKLV 705

Query: 548 KMV 550
            MV
Sbjct: 706 NMV 708



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 106/393 (26%), Positives = 186/393 (47%), Gaps = 16/393 (4%)

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
           +P  A Y  ++  L + G   D +    +M          ++  L+  Y +       F 
Sbjct: 80  SPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQ-------FE 132

Query: 405 LFDELRSR--------NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
           L DE+ S          L P    YN +++ L     L++ +     M   GI PDV T+
Sbjct: 133 LQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTF 192

Query: 457 TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA 516
            +++   C+   L  A     +M   GL PD   +TT + G ++ GD   A R++E+M+ 
Sbjct: 193 NVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVE 252

Query: 517 KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG-DGFIPDHITYTSIIHASLEMGDLR 575
            G     ++ NV+VHG CK G +E+A   +++M   DGF PD  T+ ++++   + G ++
Sbjct: 253 FGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVK 312

Query: 576 RGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALI 635
              ++ + ML++G  P + TY  +I      G ++ A     +M  +   PN +TYN LI
Sbjct: 313 HAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLI 372

Query: 636 NGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIE 695
           + LC+  ++++A  L   +  +GILP+  T+  LI   C   N + A+ L++EM  +  E
Sbjct: 373 STLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCE 432

Query: 696 PDYCTHSALLLKQLDKDYKVHAVEYLESLTLGA 728
           PD  T++ L+     K     A+  L+ + L  
Sbjct: 433 PDEFTYNMLIDSLCSKGKLDEALNMLKQMELSG 465


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  294 bits (753), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 173/533 (32%), Positives = 269/533 (50%), Gaps = 40/533 (7%)

Query: 188 MVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL-RDNGFSVKAR-EVYRMMGEFGIKPSIVT 245
           +  Q L  F +  R  + P ++  N ++  L R    S +A  +V+R +    + P+  T
Sbjct: 155 LAAQLLHSFRR--RGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYT 212

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           +N ++ + C +G + +AL  L  MQG G SP+ VTYN L+    R G L +AR L+  M 
Sbjct: 213 FNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMK 272

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
           K G+  +  +YN ++  Y+  G + +A N+ E M   G  P L TYN+L  GLC+ G+V 
Sbjct: 273 KEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVD 332

Query: 366 DARHRFFEMLRKNVI-PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
           +A     EM   +++ PD+++YNTL+    +     +A  L +E+R + +  ++VT+N +
Sbjct: 333 EAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIV 392

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           + GLCR G LE A    + M  +G+ PDVITY  +++  CK  N++ A    +EM+R GL
Sbjct: 393 VKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGL 452

Query: 485 Q-----------------------------------PDRFAYTTQIAGELKLGDTSEAYR 509
           +                                   PD  +Y T +A   K      A  
Sbjct: 453 KMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALY 512

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           L +EM  +   P + TYN L+ GLC +G L EA + L +++  G +PD  TY  IIHA  
Sbjct: 513 LWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYC 572

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
           + GDL +     N ML     P +VT   L++     G+LE A   F     KG + +VI
Sbjct: 573 KEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVI 632

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
           TYN LI  LC+   +D A   F DME  G+ P+ +TY ++++    AG  +EA
Sbjct: 633 TYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEA 685



 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 164/600 (27%), Positives = 281/600 (46%), Gaps = 72/600 (12%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           L  L  +  +  +  L VF  ++   L P+    N ++      G    A      M  F
Sbjct: 180 LSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGF 239

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G+ P +VTYNT+L + C++G + EA  LL  M+  G +P   TYN L++ ++R G ++QA
Sbjct: 240 GLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQA 299

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA------------------------- 332
             ++  M   G +    +YN +  G  + G + EA                         
Sbjct: 300 TNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVD 359

Query: 333 -----------LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
                      LNL EEM  +GV  +L T+NI++ GLC+ G++ +A  R   M  + + P
Sbjct: 360 ACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAP 419

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           D+I+YNTL+  YC++ N+ +AF+L DE+    L     T NTL+  LC+    E A++L 
Sbjct: 420 DVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELL 479

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
            +   +G +PD ++Y  ++    K      A   ++EM ++ L P  + Y T I G   +
Sbjct: 480 RSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTI 539

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
           G  +EA     E++ KG  PD  TYN+++H  CK G LE+A +   KM+ + F PD +T 
Sbjct: 540 GKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTC 599

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
            ++++     G L +   LF +   KG    ++TY  LI A    G ++ A  +F++M+ 
Sbjct: 600 NTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEA 659

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL------------ 669
           +G++P+  TYN +++ L    R ++A  +   ++E G L  +++Y ++            
Sbjct: 660 RGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVKTGKD 719

Query: 670 ------------------------INENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
                                   + E C  G  +EA  +  EM+ + +  D  T+  L+
Sbjct: 720 PEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLM 779



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 150/512 (29%), Positives = 234/512 (45%), Gaps = 44/512 (8%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  Y +   ++Q   V   M   G  PD+   N +   L   G   K  E +++  E  
Sbjct: 286 LVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAG---KVDEAFKLKDEME 342

Query: 239 ----IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
               + P +VTYNT++D+  K     +AL LL EM+ +G   + VT+N+++ G  R G+L
Sbjct: 343 HLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQL 402

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           E+A G ++ M + GL     +YN +I  Y +   + +A  L +EMV  G+     T N L
Sbjct: 403 EEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTL 462

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           +Y LCK  R  +A        ++  +PD +SY T++  Y +      A  L+DE+  R L
Sbjct: 463 LYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKL 522

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P++ TYNTLI GLC  G L  A      ++ +G++PD  TY I+++  CK G+L  A +
Sbjct: 523 TPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQ 582

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
           F N+ML    +PD     T + G    G   +A +L E    KG   D+ITYN L+  LC
Sbjct: 583 FHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALC 642

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM---------- 584
           K G ++ A      M   G  PD  TY  ++ A  E G     +++ + +          
Sbjct: 643 KDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERF 702

Query: 585 -----------LRKGLSPTLVT---------------YTVLIHAHAARGRLELAFMYFSE 618
                      ++ G  P + +               Y   +      G+L+ A     E
Sbjct: 703 SYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDE 762

Query: 619 MQVKGIRPNVITYNALINGLC-RLRRIDQAYG 649
           M  KG+  +  TY  L+ GL  R +R   A G
Sbjct: 763 MMQKGMSVDSSTYITLMEGLIKRQKRQTHAAG 794



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 155/332 (46%), Gaps = 36/332 (10%)

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLL--FDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           R +V P + + N +L    RS +      L  F  L +  L P   T+N L+   C  G 
Sbjct: 166 RGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGT 225

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           L  A      M   G+ PDV+TY  ++   C+ G L  AR     M ++G+ P R  Y T
Sbjct: 226 LADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNT 285

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            ++   +LG   +A  + E M A GF PDL TYNVL  GLC+ G ++EA +L        
Sbjct: 286 LVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKL-------- 337

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
              D + + SI+                        SP +VTY  L+ A     R   A 
Sbjct: 338 --KDEMEHLSIV------------------------SPDVVTYNTLVDACFKYQRSSDAL 371

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
               EM+ KG++ +++T+N ++ GLCR  ++++A G    M EEG+ P+  TY  LI+  
Sbjct: 372 NLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAY 431

Query: 674 CNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           C A N  +A  L  EM+   ++ D  T + LL
Sbjct: 432 CKARNVAKAFVLMDEMVRSGLKMDTFTLNTLL 463



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 170/380 (44%), Gaps = 38/380 (10%)

Query: 157 GILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK 216
           G L ++   GL+    +   + L+  Y K   V +  ++ ++M+R+GL  D    N ++ 
Sbjct: 407 GRLKMMTEEGLAP--DVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLY 464

Query: 217 VLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSP 276
            L       +A E+ R   + G  P  V+Y T++ ++ KE + + AL L  EM  R  +P
Sbjct: 465 NLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTP 524

Query: 277 NGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLE 336
           +  TYN LI G    G+L +A   + +++K GL     +YN II  Y ++G L +A    
Sbjct: 525 SIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFH 584

Query: 337 EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS 396
            +M+     P + T N L+ GLC  G++  A   F     K    D+I+YNTL+   C+ 
Sbjct: 585 NKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKD 644

Query: 397 GNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
           G++  A   F ++ +R L P   TYN ++  L   G  E AQ +   +   G L +  +Y
Sbjct: 645 GDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSY 704

Query: 457 TIMVNGS------------------------------------CKMGNLSMAREFFNEML 480
            ++ + +                                    C  G L  A+   +EM+
Sbjct: 705 PLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMM 764

Query: 481 RKGLQPDRFAYTTQIAGELK 500
           +KG+  D   Y T + G +K
Sbjct: 765 QKGMSVDSSTYITLMEGLIK 784



 Score = 40.8 bits (94), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 43/102 (42%)

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
           + PN  T+N L++  C    +  A      M+  G+ P+  TY  L+  +C  G   EA 
Sbjct: 206 LHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEAR 265

Query: 684 RLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
            L   M    I P   T++ L+       +   A   +E++T
Sbjct: 266 TLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMT 307


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  294 bits (752), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 189/639 (29%), Positives = 307/639 (48%), Gaps = 51/639 (7%)

Query: 104 PRIALRFFRWV-ET--QPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILD 160
           PR A  FF +  ET  +P V        T++++LI     +  +     V       +  
Sbjct: 103 PRTAFNFFHFASETLFEPAVA------VTVVDLLIHVYSTQFKHLGFGVVF-----ELFS 151

Query: 161 VLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRD 220
           +L   GL    S+K  + LL    K + V+    VF+ M   G+ PDV   + ++     
Sbjct: 152 LLANKGLFP--SLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCT 209

Query: 221 NGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVT 280
            G    A E++R M + G+ P++VTYN ++   CK G + EA +   +M+     P+ VT
Sbjct: 210 GGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVT 269

Query: 281 YNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV 340
           Y VLI G  +    ++A  ++++M   G   +   YN +I GY   G +  AL + ++M+
Sbjct: 270 YGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMI 329

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
           + G++P   T N LI G CK  ++  A H   EML    + +  ++ ++++  C      
Sbjct: 330 SNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFD 389

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
            A L   E+  RN  P       L+ GLC+ G    A +L   ++ +G   + +T   ++
Sbjct: 390 SALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALI 449

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
           +G C+ G+   A +   EML +GL  D  +Y T I    K G   E ++L+EEM+ +G  
Sbjct: 450 HGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQ 509

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT------------------ 562
           PD+ TYN+L+HGLC +G +EEA  L  +   +G  PD  TY                   
Sbjct: 510 PDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKL 569

Query: 563 -----------------SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
                            ++I A  E G++R    L ++M  +G+  T  TY+ LIH  + 
Sbjct: 570 FQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSN 629

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
            G ++ A     EM+ +G+ PNV+ Y ALI G C+L ++ +   +  +M    + PNK T
Sbjct: 630 IGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKIT 689

Query: 666 YTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
           YTI+IN +C  GN + A +L  EM  + I PD  T++AL
Sbjct: 690 YTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNAL 728



 Score =  275 bits (704), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 163/484 (33%), Positives = 256/484 (52%), Gaps = 1/484 (0%)

Query: 222 GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY 281
           GF V   E++ ++   G+ PS+ T N +L S  K  E++ + ++   M   G +P+   +
Sbjct: 142 GFGV-VFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLF 200

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
           + ++  F   G ++ A  L R M K+G+  +  +YN II G  + G L EA   +E+M  
Sbjct: 201 STMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEK 260

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
             V P+L TY +LI GL K  R  +A     EM  +   P+ + YNTL+ GYCR GNI  
Sbjct: 261 ERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNIST 320

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           A  + D++ S  + P  VT N+LI G C+   +E A+ L E M+  G + +  T+T +++
Sbjct: 321 ALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIH 380

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
             C       A  F  EML +  +P+    T  ++G  + G  SEA  L   +L KGF  
Sbjct: 381 RLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAA 440

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           + +T N L+HGLC+ GS EEA +LL++M+  G + D I+Y ++I A  + G +  G  L 
Sbjct: 441 NTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLK 500

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
             M+R+G+ P + TY +L+H     G++E A   + E +  G  P+  TY  +I+G C+ 
Sbjct: 501 EEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKA 560

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
            R+++   LF +M    I  N   Y  LI   C  GN +EA RL  +M  R I     T+
Sbjct: 561 NRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATY 620

Query: 702 SALL 705
           S+L+
Sbjct: 621 SSLI 624



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 132/455 (29%), Positives = 224/455 (49%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y +   +   L + + M+ NG+ P+   CN +I+    +     A  +   M   G   +
Sbjct: 312 YCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVIN 371

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             T+ +++   C +     AL  + EM  R   PN     +L++G  +NG+  +A  L  
Sbjct: 372 QGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWY 431

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            +L+ G   +  + N +I G  E G   EA  L +EM+ RG+     +YN LI   CK G
Sbjct: 432 RLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEG 491

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           +V +      EM+R+ + PD+ +YN LL+G C  G I EA  L+ E +     P   TY 
Sbjct: 492 KVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYG 551

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            +IDG C+   +E  ++L + M+   I  + + Y  ++   C+ GN+  A    ++M  +
Sbjct: 552 IMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSR 611

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G+      Y++ I G   +G    A +L +EM  +G  P+++ Y  L+ G CKLG + + 
Sbjct: 612 GIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKV 671

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
           + +L++M  +   P+ ITYT +I+   ++G+++    L N M +KG+ P  VTY  L + 
Sbjct: 672 DSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNG 731

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
               G++E A      M   GI  + ITY  LI+G
Sbjct: 732 FCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDG 766



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 128/413 (30%), Positives = 197/413 (47%), Gaps = 40/413 (9%)

Query: 156 HGILDVLIGGG-LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRI 214
           H + ++L GGG ++      ++  L L    K   +  LL   +ML     P+      +
Sbjct: 358 HLLEEMLTGGGVINQGTFTSVIHRLCL----KCRFDSALLFIMEMLLRNFKPNDGLLTLL 413

Query: 215 IKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGC 274
           +  L  NG   +A E++  + E G   + VT N ++   C+ G  +EA +LL EM  RG 
Sbjct: 414 VSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGL 473

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
             + ++YN LI    + G++E+   L  +M++ G++   ++YN ++ G    G + EA  
Sbjct: 474 VLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGG 533

Query: 335 LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
           L  E    G  P   TY I+I G CK  RV +    F EM+   +  + + Y TL+  YC
Sbjct: 534 LWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYC 593

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV- 453
            +GN+ EAF L D++RSR +  T  TY++LI GL   G ++ A QL + M  +G+ P+V 
Sbjct: 594 ENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVV 653

Query: 454 ----------------------------------ITYTIMVNGSCKMGNLSMAREFFNEM 479
                                             ITYTIM+NG CK+GN+  A +  NEM
Sbjct: 654 CYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEM 713

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
            +KG+ PD   Y     G  K G   EA ++ + M   G   D ITY  L+ G
Sbjct: 714 AQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDG 766



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 174/336 (51%)

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
           F  +  K + P + + N LL    ++  +  ++ +FD +    + P V  ++T+++  C 
Sbjct: 150 FSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCT 209

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
            G ++ A +L   M   G+ P+V+TY  +++G CK G L  A +F  +M ++ ++P    
Sbjct: 210 GGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVT 269

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           Y   I G +KL    EA  + +EM  +G+ P+ + YN L+ G C++G++  A ++   M+
Sbjct: 270 YGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMI 329

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
            +G  P+ +T  S+I    +   +     L   ML  G      T+T +IH    + R +
Sbjct: 330 SNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFD 389

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
            A ++  EM ++  +PN      L++GLC+  +  +A  L+  + E+G   N  T   LI
Sbjct: 390 SALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALI 449

Query: 671 NENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
           +  C AG+ +EA +L KEML+R +  D  +++ L+L
Sbjct: 450 HGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLIL 485



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 4/238 (1%)

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           Y+TQ    L  G   E + L   +  KG  P L T N L+  L K   ++ + ++   M 
Sbjct: 134 YSTQFK-HLGFGVVFELFSL---LANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMC 189

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
             G  PD   ++++++A    G +    +LF  M + G++P +VTY  +IH     GRL+
Sbjct: 190 HCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLD 249

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
            AF +  +M+ + ++P+++TY  LINGL +L R D+A  +  +M + G  PN   Y  LI
Sbjct: 250 EAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLI 309

Query: 671 NENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLGA 728
           +  C  GN   AL++  +M+   I P+  T ++L+      +   HA   LE +  G 
Sbjct: 310 DGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGG 367



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 70/138 (50%)

Query: 188 MVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
           +V+    + ++M + GL P+V     +I      G   K   + + M    + P+ +TY 
Sbjct: 632 LVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYT 691

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
            M++  CK G M+ A +LL EM  +G  P+ VTYN L  GF + G++E+A  +   M   
Sbjct: 692 IMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTG 751

Query: 308 GLKVSAHSYNPIICGYSE 325
           G+ +   +Y  +I G+ +
Sbjct: 752 GISLDDITYTTLIDGWHK 769


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  294 bits (752), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 188/633 (29%), Positives = 296/633 (46%), Gaps = 85/633 (13%)

Query: 21  LKKVRFFFPFCFSVHTYPSISESNNKD-SVLNPESESYYKELIISTVEEKPWAFCNNRWV 79
           +K ++ F    F + T+ S+S S     S+    +ES     ++ ++E   W F     V
Sbjct: 1   MKFLKIFNSKPFKLRTFNSLSHSQTPPFSIPTTLTES----TLLHSIESSQWHFIEQ--V 54

Query: 80  SDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQP---GVKRDEFVFCTILEILIE 136
           + H    +         L  +R  P++ L     ++  P    +       C +  +   
Sbjct: 55  APHLTPSLL-----SSTLTTLRHNPQLVLHLLSHLQNHPHSLDLATSSLAICVLYRLPSP 109

Query: 137 SGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVF 196
              +     ++ +  C N     ++ +        +  I DLL+  Y +     + L  F
Sbjct: 110 KPSINLIQRLILSPTCTNRTIFDELALARDRVDAKTTLIFDLLVRAYCELKKPNEALECF 169

Query: 197 NKMLRNGLLPDVKNCNRI-----------------------------------IKVLRDN 221
             +   G +P+++ CN++                                   I VL   
Sbjct: 170 YLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKE 229

Query: 222 GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY 281
           G   KA+E    M   G+KP++VTYNT++   C  G+ Q A  +   M+ +G  P+  TY
Sbjct: 230 GKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTY 289

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
           N  I+G  + G LE+A GLI  ML+ GL  +A +YN +I GY  KG L +A    +EM++
Sbjct: 290 NSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMIS 349

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
           +G+  +L TYN+ I+ L   GR+ DA +   EM  K ++PD +++N L+ GYCR G+   
Sbjct: 350 KGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKR 409

Query: 402 AFLLFDELRSRNLVPTVVTY-----------------------------------NTLID 426
           AF L DE+  + + PT+VTY                                   N LID
Sbjct: 410 AFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALID 469

Query: 427 GLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
           G C  G+++ A QL + M N  +LPD ITY  ++ G C+ G +  AR+  +EM R+G++P
Sbjct: 470 GHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKP 529

Query: 487 DRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
           D  +Y T I+G  K GD  +A+R+++EM+  GF P ++TYN L+ GLCK    E A ELL
Sbjct: 530 DHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELL 589

Query: 547 RKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
           ++MV  G  PD  TY SII A   + DL    D
Sbjct: 590 KEMVSKGITPDDSTYLSIIEAMETVDDLEGNDD 622



 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 149/445 (33%), Positives = 242/445 (54%)

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           +A E + ++ E G  P+I T N ML  F K    Q A  L  EM       +  T+N++I
Sbjct: 164 EALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMI 223

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
               + G+L++A+  I  M  LG+K +  +YN II G+  +G    A  + + M  +G+ 
Sbjct: 224 NVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLE 283

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P   TYN  I GLCK GR+ +A     +ML   ++P+ ++YN L+ GYC  G++ +A+  
Sbjct: 284 PDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAY 343

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
            DE+ S+ ++ ++VTYN  I  L   G +  A  + + M  +G++PD +T+ I++NG C+
Sbjct: 344 RDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCR 403

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
            G+   A    +EM+ KG+QP    YT+ I    K     EA  L  ++  +G  PD+I 
Sbjct: 404 CGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIV 463

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           +N L+ G C  G+++ A +LL++M     +PD ITY +++      G +   R L + M 
Sbjct: 464 FNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMK 523

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
           R+G+ P  ++Y  LI  ++ RG ++ AF    EM   G  P ++TYNALI GLC+ +  +
Sbjct: 524 RRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGE 583

Query: 646 QAYGLFIDMEEEGILPNKYTYTILI 670
            A  L  +M  +GI P+  TY  +I
Sbjct: 584 HAEELLKEMVSKGITPDDSTYLSII 608



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 143/464 (30%), Positives = 242/464 (52%)

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
           + + ++ ++ ++C+  +  EALE  + ++ +G  PN  T N +++ F +    + A  L 
Sbjct: 145 TTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLY 204

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
            +M ++ ++ S +++N +I    ++G L +A      M T GV P + TYN +I+G C  
Sbjct: 205 AEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLR 264

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           G+   AR  F  M  K + PD  +YN+ + G C+ G + EA  L  ++    LVP  VTY
Sbjct: 265 GKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTY 324

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           N LIDG C  GDL+ A   ++ MI++GI+  ++TY + ++     G +  A     EM  
Sbjct: 325 NALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMRE 384

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
           KG+ PD   +   I G  + GD   A+ L +EM+ KG  P L+TY  L++ L K   ++E
Sbjct: 385 KGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKE 444

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A+ L  K+  +G +PD I + ++I      G++ R   L   M    + P  +TY  L+ 
Sbjct: 445 ADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQ 504

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
            +   G++E A     EM+ +GI+P+ I+YN LI+G  +   +  A+ +  +M   G  P
Sbjct: 505 GYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDP 564

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
              TY  LI   C     + A  L KEM+ + I PD  T+ +++
Sbjct: 565 TILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSII 608



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 209/396 (52%), Gaps = 35/396 (8%)

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
           A T   +++L+   C+  + ++A   F+ +  K  +P+I + N +L  + +      A++
Sbjct: 143 AKTTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWV 202

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
           L+ E+   N+  ++ T+N +I+ LC+ G L+ A++   +M   G+ P+V+TY  +++G C
Sbjct: 203 LYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHC 262

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
             G    AR  F  M  KGL+PD + Y + I+G  K G   EA  L  +ML  G  P+ +
Sbjct: 263 LRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAV 322

Query: 525 TYNVLVHGLCKLGSLE-----------------------------------EANELLRKM 549
           TYN L+ G C  G L+                                   +A+ ++++M
Sbjct: 323 TYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEM 382

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRL 609
              G +PD +T+  +I+     GD +R   L + M+ KG+ PTLVTYT LI+    R R+
Sbjct: 383 REKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRM 442

Query: 610 ELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL 669
           + A   FS++Q +G+ P++I +NALI+G C    ID+A+ L  +M+   +LP++ TY  L
Sbjct: 443 KEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTL 502

Query: 670 INENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +   C  G  +EA +L  EM  R I+PD+ +++ L+
Sbjct: 503 MQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLI 538


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 176/562 (31%), Positives = 281/562 (50%), Gaps = 39/562 (6%)

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLL-PDVKNCNRIIKVL-RDNGFS 224
           L+S  +  + D  L  Y +  +      + +   R G + P ++  N ++  L R    S
Sbjct: 130 LASFPTSALADAALSTYARLRLPHLAAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTS 189

Query: 225 VKAR-EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNV 283
            +A  + +  +    + P+  T+N ++ + C +G + +AL  L +MQG G SP+ VTYN 
Sbjct: 190 PQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNT 249

Query: 284 LITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG 343
           L+    R G L +AR L+  M K G+  +  +YN ++  Y+  G + +A ++ E M   G
Sbjct: 250 LLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFG 309

Query: 344 VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI-PDIISYNTLLYGYCRSGNIGEA 402
             P L TYN+L  GLC+ G+V +A     EM +  ++ PD+++YNTL+    +     +A
Sbjct: 310 FEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDA 369

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
             L +E+R + +  ++VT+N ++ GLCR G LE A    E M  +G+ PDVITY  +++ 
Sbjct: 370 LNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDA 429

Query: 463 SCKMGNLSMAREFFNEMLRKGLQ-----------------------------------PD 487
           SCK GN++ A    +EM+R GL+                                   PD
Sbjct: 430 SCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPD 489

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
             +Y T +A   K      A  L +EM+ +   P + TYN L+ GL  +G L EA + L 
Sbjct: 490 EVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLN 549

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
           +++  G +PD  TY  IIHA  + GDL +     N M+     P +VT   L++     G
Sbjct: 550 ELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYG 609

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
           RLE A   F     KG + +VITYN LI  LC+   +D A   F DME  G+ P+ +TY 
Sbjct: 610 RLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYN 669

Query: 668 ILINENCNAGNWQEALRLYKEM 689
           +L++    AG   EA ++  ++
Sbjct: 670 VLLSALSEAGRSVEAQKMLHKL 691



 Score =  263 bits (671), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 155/493 (31%), Positives = 263/493 (53%), Gaps = 3/493 (0%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
            +LL+  +  K  +   L   +KM   GL PD    N ++      G   +AR +   M 
Sbjct: 212 FNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMK 271

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
           + GI P+  TYNT++ ++ + G +++A +++  M   G  P+  TYNVL  G  + G+++
Sbjct: 272 KEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVD 331

Query: 296 QARGLIRDMLKLGLKVSAH--SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           +A  L  +M +LG+ VS    +YN ++    +     +ALNL EEM  +GV  +L T+NI
Sbjct: 332 EAFKLKDEMEQLGI-VSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNI 390

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           ++ GLC+ G++ +A  R   M  + + PD+I+YNTL+   C++GN+ +AF+L DE+    
Sbjct: 391 IVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSG 450

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           L     T NTL+  LC+    E A++L      +G +PD ++Y  ++    K      A 
Sbjct: 451 LKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPAL 510

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
             ++EM+++ L P    Y T I G   +G  +EA     E++  G  PD  TYN+++H  
Sbjct: 511 CLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAY 570

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
           CK G LE+A +   KMV + F PD +T  ++++     G L +   LF + + KG    +
Sbjct: 571 CKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDV 630

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
           +TY  LI A      ++ A  +F++M+V+G++P+V TYN L++ L    R  +A  +   
Sbjct: 631 ITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHK 690

Query: 654 MEEEGILPNKYTY 666
           + E G L  ++ Y
Sbjct: 691 LNESGKLYGRFFY 703



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 127/449 (28%), Positives = 218/449 (48%), Gaps = 72/449 (16%)

Query: 189 VEQCLLVFNKMLRNGLL-PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
           V++   + ++M + G++ PDV   N ++        S  A  +   M E G+K S+VT+N
Sbjct: 330 VDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHN 389

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
            ++   C+EG+++EAL  L  M   G +P+ +TYN LI    + G + +A  L+ +M++ 
Sbjct: 390 IIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRS 449

Query: 308 GLKVSAH-----------------------------------SYNPIICGYSEKGLLVEA 332
           GLK+                                      SY  ++  Y ++     A
Sbjct: 450 GLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPA 509

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
           L L +EM+ R + P+++TYN LI GL   G++++A  +  E++   ++PD  +YN +++ 
Sbjct: 510 LCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHA 569

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
           YC+ G++ +AF   +++   +  P VVT NTL++GLC YG LE A +L E+ + +G   D
Sbjct: 570 YCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVD 629

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA----Y 508
           VITY  ++   CK  ++  A  FF +M  +GLQPD F Y   ++   + G + EA    +
Sbjct: 630 VITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLH 689

Query: 509 RLQE-----------------EMLAKGFPP---------------DLITYNVLVHGLCKL 536
           +L E                 E +  G  P               D  +YN  +  LC  
Sbjct: 690 KLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIG 749

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSII 565
           G L+EA  +L +M+  G   D+ TY +++
Sbjct: 750 GQLKEAKAVLDEMMQKGMSVDNSTYITLM 778



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 122/239 (51%), Gaps = 4/239 (1%)

Query: 471 MAREFFNEMLRKG-LQPDRFAYTTQIAGELKLGDTSEAYRLQ--EEMLAKGFPPDLITYN 527
           +A +  +   R+G ++P   A    ++   +   TS    L     ++A    P+  T+N
Sbjct: 154 LAAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFN 213

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
           +LVH  C  G+L +A   L KM G G  PD +TY ++++A    G L   R L   M ++
Sbjct: 214 LLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKE 273

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
           G+ PT  TY  L+ A+A  G ++ A      M   G  P++ TYN L  GLC+  ++D+A
Sbjct: 274 GIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEA 333

Query: 648 YGLFIDMEEEGIL-PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           + L  +ME+ GI+ P+  TY  L++         +AL L +EM ++ ++    TH+ ++
Sbjct: 334 FKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIV 392



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 111/241 (46%), Gaps = 11/241 (4%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
            N+++  GL+PD    N II      G   KA + +  M E   KP +VT NT+++  C 
Sbjct: 548 LNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCL 607

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
            G +++A++L      +G   + +TYN LI    ++ +++ A     DM   GL+    +
Sbjct: 608 YGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFT 667

Query: 316 YNPIICGYSEKGLLVEA------LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
           YN ++   SE G  VEA      LN   ++  R   P++ +    +    + G+  + + 
Sbjct: 668 YNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAV----ETGKDPEVKS 723

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
              E +      D  SYN  +   C  G + EA  + DE+  + +     TY TL++GL 
Sbjct: 724 D-IESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLI 782

Query: 430 R 430
           +
Sbjct: 783 K 783



 Score = 44.3 bits (103), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 45/102 (44%)

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
           + PN  T+N L++  C    +  A      M+  G+ P+  TY  L+N +C  G   EA 
Sbjct: 205 LHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEAR 264

Query: 684 RLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
            L   M    I P   T++ L+       +   A + +E++T
Sbjct: 265 TLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMT 306


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 174/622 (27%), Positives = 309/622 (49%), Gaps = 23/622 (3%)

Query: 94  VRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCV 153
           V  + +I+  P  AL  F   +++ G K     +  I++ L   G     +  +E ++  
Sbjct: 10  VAAVVKIQTDPLKALEMFNSAKSEDGFKHTASTYKCIVQKLGHHG----EFEEMEKLLSE 65

Query: 154 NMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNR 213
               + + L+ G     +           Y +K  V++ +  F +M      P V + N 
Sbjct: 66  MRENVNNALLEGAYIEAMKN---------YGRKGKVQEAVDTFERMDFYNCDPSVHSHNA 116

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
           I+ +L + G+  +A +VY  M + G++  + TY   + SFCK      AL LL  M   G
Sbjct: 117 IMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELG 176

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
           C  N V Y  ++ G   +GE + AR L  +ML   L     ++N ++    +KGL+ E+ 
Sbjct: 177 CDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESE 236

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWG---------RVSDARHRFFEMLRKNVIPDII 384
            L  +++ RGV P L T+NI + GLC+ G         RV +A     +M+     PD +
Sbjct: 237 RLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDL 296

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
           +YN+++ GYC+ G + +A  +  +   +   P   TY +LI+G C+ GD + A  + ++ 
Sbjct: 297 TYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDG 356

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
           + +G+ P ++ Y  ++ G  + G +  A +  NEM   G  P+ + Y   I G  K+G  
Sbjct: 357 LGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCV 416

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
           S+A  L ++ +AKG PPD+ TYN L+ G CK   L+ A E++ +M   G  PD ITY ++
Sbjct: 417 SDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTL 476

Query: 565 IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
           ++   + G      ++F  M  KG +P ++TY +++ +     ++  A     EM+ KG+
Sbjct: 477 LNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGL 536

Query: 625 RPNVITYNALINGLCRLRRIDQAYGLFIDMEEE-GILPNKYTYTILINENCNAGNWQEAL 683
           +P+V+++  L  G C++  ID AY LF  ME++  +     TY I+++      N   A+
Sbjct: 537 KPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAM 596

Query: 684 RLYKEMLDREIEPDYCTHSALL 705
           +L+  M +   +PD  T+  ++
Sbjct: 597 KLFSVMKNSGCDPDNYTYRVVI 618



 Score =  261 bits (668), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 165/537 (30%), Positives = 275/537 (51%), Gaps = 25/537 (4%)

Query: 103 KPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVL 162
           +P  ALR  R +  + G   +   +CT++  L +SG    A              + D +
Sbjct: 161 RPYAALRLLRNM-PELGCDSNAVAYCTVVAGLYDSGEHDHA------------RELFDEM 207

Query: 163 IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL-RD- 220
           +   L  C  +   + L+ +  KK +V +   +  K+L+ G+ P++   N  ++ L R+ 
Sbjct: 208 LARCL--CPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREG 265

Query: 221 -------NGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
                  N   V+A E  R M   G +P  +TYN+++D +CK+G +Q+A  +L +   +G
Sbjct: 266 ALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKG 325

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
             P+  TY  LI GF ++G+ ++A  + +D L  GL+ S   YN +I G S++GL++ AL
Sbjct: 326 FKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPAL 385

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
            L  EM   G  P + TYN++I GLCK G VSDA H   + + K   PDI +YNTL+ GY
Sbjct: 386 QLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGY 445

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
           C+   +  A  + + + S+ + P V+TYNTL++GLC+ G  E   ++ + M  +G  P++
Sbjct: 446 CKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNI 505

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
           ITY I+V+  CK   ++ A +   EM  KGL+PD  ++ T   G  K+GD   AY+L   
Sbjct: 506 ITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRR 565

Query: 514 MLAK-GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           M  +        TYN++V    +  ++  A +L   M   G  PD+ TY  +I    +MG
Sbjct: 566 MEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMG 625

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
           ++ +G       + K   P+L T+  +++    + ++  A      M  KGI P  +
Sbjct: 626 NITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPETV 682



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 108/239 (45%), Gaps = 36/239 (15%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K+  ++    + N+M   G+ PDV   N ++  L   G S +  E+++ M E G  P+
Sbjct: 445 YCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPN 504

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGV----------------------- 279
           I+TYN ++DS CK  ++ EA++LL EM+ +G  P+ V                       
Sbjct: 505 IITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFR 564

Query: 280 -------------TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEK 326
                        TYN++++ FS    +  A  L   M   G     ++Y  +I G+ + 
Sbjct: 565 RMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKM 624

Query: 327 GLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
           G + +      E + +   P+L T+  ++  LC   +V +A      ML+K ++P+ ++
Sbjct: 625 GNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPETVN 683



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 9/178 (5%)

Query: 552 DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV--TYTVLIHAHAARGRL 609
           DGF     TY  I+      G+      L + M R+ ++  L+   Y   +  +  +G++
Sbjct: 34  DGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEM-RENVNNALLEGAYIEAMKNYGRKGKV 92

Query: 610 ELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL 669
           + A   F  M      P+V ++NA++N L      +QA+ +++ M + G+  + YTYTI 
Sbjct: 93  QEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIR 152

Query: 670 INENCNAGNWQEALRLYKEMLDREIEPD---YCTHSALLLKQLDKDYKVHAVEYLESL 724
           I   C       ALRL + M +   + +   YCT  A L    + D   HA E  + +
Sbjct: 153 IKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHD---HARELFDEM 207


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 168/538 (31%), Positives = 290/538 (53%), Gaps = 3/538 (0%)

Query: 171 VSIKILDLLLLIYTKKSMVEQCL-LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE 229
           V I I + LL  + +    ++ L ++ ++    G +PDV + + ++K L D G S +A +
Sbjct: 144 VDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADD 203

Query: 230 VYRMMGEFG--IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITG 287
           + RMM E G    P +V YNT++D F KEG++ +A +L  EM  RG  P+ VTY+ ++  
Sbjct: 204 LLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHA 263

Query: 288 FSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPT 347
             +   +++A   +R M+  G+  +  +YN +I GYS  G   EA+ + +EM  + + P 
Sbjct: 264 LCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPD 323

Query: 348 LATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFD 407
           + T+N+L+  LCK+G++ +AR  F  M  K   PD+ SYN +L GY   G + +   LFD
Sbjct: 324 VVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 383

Query: 408 ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG 467
            +    + P + T+N LI      G L+ A  +   M + G+ P+V+TYT ++   C++G
Sbjct: 384 LMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIG 443

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
            +  A E FN+M+ +G+ PD++AY   I G    G   +A  L  E++  G   D++ ++
Sbjct: 444 KMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFS 503

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
            +++ LCKLG + +A  +    V  G  P  + Y+ ++     +G + +   +F+ M+  
Sbjct: 504 SIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 563

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
           G+ P  V Y  L++ +   GR++     F EM  KGI+P+ I YN +I+GL    R   A
Sbjct: 564 GIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPA 623

Query: 648 YGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
              F +M E GI  NK TY+I++        + EA+ L+KE+    ++ D  T + ++
Sbjct: 624 KVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMI 681



 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 160/506 (31%), Positives = 265/506 (52%), Gaps = 38/506 (7%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR-GCSPNGVTYNVLITGFSRNGELEQ 296
           G++  I+  N +L  FC+     EAL++L       GC P+  +Y++L+      G+  Q
Sbjct: 141 GLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQ 200

Query: 297 ARGLIRDMLKLGLKVSAH--SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           A  L+R M + G   S    +YN +I G+ ++G + +A +L +EMV RG+ P   TY+ +
Sbjct: 201 ADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSV 260

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           ++ LCK   +  A     +M+ K V+P+  +YN L+YGY  +G   EA  +F E+R +++
Sbjct: 261 VHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSI 320

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG----SC------ 464
           +P VVT+N L+  LC+YG ++ A+ + + M  +G  PDV +Y IM+NG     C      
Sbjct: 321 LPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTD 380

Query: 465 -------------------------KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
                                      G L  A   FNEM   G++P+   YTT IA   
Sbjct: 381 LFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALC 440

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           ++G   +A     +M+ +G  PD   Y+ L+ G C  GSL +A EL+ +++ +G   D +
Sbjct: 441 RIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIV 500

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
            ++SII+   ++G +   +++F+  +  GL PT V Y++L+  +   G++E A   F  M
Sbjct: 501 LFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAM 560

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
              GI PN + Y  L+NG C++ RID+   LF +M ++GI P+   Y I+I+    AG  
Sbjct: 561 VSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRT 620

Query: 680 QEALRLYKEMLDREIEPDYCTHSALL 705
             A   + EM +  I  + CT+S +L
Sbjct: 621 VPAKVKFHEMTESGIAMNKCTYSIVL 646



 Score =  265 bits (678), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 150/542 (27%), Positives = 277/542 (51%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K+  V +   +F +M++ G+ PD    + ++  L       KA    R M   G+ P+
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPN 288

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             TYN ++  +   G+ +EA+ +  EM+ +   P+ VT+N+L+    + G++++AR +  
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFD 348

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M   G      SYN ++ GY+ KG LV+  +L + M+  G+AP + T+N+LI      G
Sbjct: 349 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCG 408

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            +  A   F EM    V P++++Y T++   CR G + +A   F+++  + + P    Y+
Sbjct: 409 MLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYH 468

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            LI G C +G L  A++L   ++N G+  D++ ++ ++N  CK+G +  A+  F+  +  
Sbjct: 469 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNV 528

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           GL P    Y+  + G   +G   +A R+ + M++ G  P+ + Y  LV+G CK+G ++E 
Sbjct: 529 GLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEG 588

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             L R+M+  G  P  I Y  II    E G     +  F+ M   G++    TY++++  
Sbjct: 589 LSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRG 648

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
                  + A   F E++   ++ ++IT N +I G+ + RR+++A  LF  +   G++P 
Sbjct: 649 LFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPC 708

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLE 722
             TY+I+I      G  +EA  ++  M +   EPD    + ++ + L K+  V A  YL 
Sbjct: 709 VVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLS 768

Query: 723 SL 724
            +
Sbjct: 769 KI 770



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 144/503 (28%), Positives = 249/503 (49%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y+     ++ + VF +M R  +LPDV   N ++  L   G   +AR+V+  M   G  P 
Sbjct: 299 YSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPD 358

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           + +YN ML+ +  +G + +  +L   M G G +P   T+NVLI  ++  G L++A  +  
Sbjct: 359 VFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFN 418

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M   G+K +  +Y  +I      G + +A+    +M+ +GVAP    Y+ LI G C  G
Sbjct: 419 EMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHG 478

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            +  A+    E++   +  DI+ +++++   C+ G + +A  +FD   +  L PT V Y+
Sbjct: 479 SLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYS 538

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            L+DG C  G +E A ++ + M++ GI P+ + Y  +VNG CK+G +      F EML+K
Sbjct: 539 MLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQK 598

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G++P    Y   I G  + G T  A     EM   G   +  TY++++ GL K    +EA
Sbjct: 599 GIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEA 658

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             L +++       D IT  ++I    +   +   +DLF ++ R GL P +VTY+++I  
Sbjct: 659 IFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITN 718

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
               G +E A   FS MQ  G  P+    N ++  L +   I +A      ++E      
Sbjct: 719 LIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLE 778

Query: 663 KYTYTILINENCNAGNWQEALRL 685
             T  +L++   + G  +E +R 
Sbjct: 779 HLTTMLLVDLFSSKGTCREHIRF 801



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 132/475 (27%), Positives = 225/475 (47%), Gaps = 39/475 (8%)

Query: 270 QG-RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
           QG R  SP   TY +L+   +R    E A      +L+ GL+V     N ++ G+ E   
Sbjct: 102 QGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKR 161

Query: 329 LVEALN-LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI--PDIIS 385
             EAL+ L       G  P + +Y+IL+  LC  G+   A      M     +  PD+++
Sbjct: 162 TDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVA 221

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           YNT++ G+ + G++ +A  LF E+  R + P  VTY++++  LC+   ++ A+     M+
Sbjct: 222 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMV 281

Query: 446 NQG-----------------------------------ILPDVITYTIMVNGSCKMGNLS 470
           N+G                                   ILPDV+T+ +++   CK G + 
Sbjct: 282 NKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIK 341

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            AR+ F+ M  KG  PD F+Y   + G    G   +   L + ML  G  P + T+NVL+
Sbjct: 342 EARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLI 401

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
                 G L++A  +  +M   G  P+ +TYT++I A   +G +    + FN M+ +G++
Sbjct: 402 KAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVA 461

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           P    Y  LI      G L  A    SE+   G+  +++ ++++IN LC+L R+  A  +
Sbjct: 462 PDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNI 521

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           F      G+ P    Y++L++  C  G  ++ALR++  M+   IEP+   +  L+
Sbjct: 522 FDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLV 576



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 210/416 (50%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
            ++L+    K   +++   VF+ M   G  PDV + N ++      G  V   +++ +M 
Sbjct: 327 FNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLML 386

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
             GI P I T+N ++ ++   G + +A+ +  EM+  G  PN +TY  +I    R G+++
Sbjct: 387 GDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMD 446

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
            A      M+  G+    ++Y+ +I G+   G L++A  L  E++  G+   +  ++ +I
Sbjct: 447 DAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSII 506

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
             LCK GRV DA++ F   +   + P  + Y+ L+ GYC  G + +A  +FD + S  + 
Sbjct: 507 NNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIE 566

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P  V Y TL++G C+ G ++    L   M+ +GI P  I Y I+++G  + G    A+  
Sbjct: 567 PNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVK 626

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
           F+EM   G+  ++  Y+  + G  K     EA  L +E+ A     D+IT N ++ G+ +
Sbjct: 627 FHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQ 686

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
              +EEA +L   +   G +P  +TY+ +I   ++ G +    D+F++M   G  P
Sbjct: 687 TRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEP 742


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 188/635 (29%), Positives = 312/635 (49%), Gaps = 35/635 (5%)

Query: 93  LVRVLNRIREKPRIALRFFRWVETQPGVKRDEFV--FCTILEILIESGLLRSAYWVVETV 150
           L+ VL +I+   R+ L FF W  +    +RD  +   C ++ + + S  L+ A  ++ + 
Sbjct: 90  LIWVLMKIKCDYRLVLDFFDWARS----RRDSNLESLCIVIHLAVASKDLKVAQSLISSF 145

Query: 151 VCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKN 210
                  + D  +          +  DLL+  Y       +   VF              
Sbjct: 146 WERPKLNVTDSFV----------QFFDLLVYTYKDWGSDPRVFDVF-------------- 181

Query: 211 CNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG-EMQEALELLWEM 269
                +VL D G   +AR V+  M  +G+  S+ + N  L    K+  +   A+ +  E 
Sbjct: 182 ----FQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREF 237

Query: 270 QGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLL 329
              G   N  +YN++I    + G +++A  L+  M   G      SY+ ++ GY   G L
Sbjct: 238 PEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGEL 297

Query: 330 VEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTL 389
            +   L E M  +G+ P    Y  +I  LC+  ++++A   F EM+R+ ++PD + Y TL
Sbjct: 298 DKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTL 357

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
           + G+C+ G+I  A   F E+ SR++ P V+TY  +I G C+ GD+  A +L   M  +G+
Sbjct: 358 IDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 417

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
            PD +T+T ++NG CK G++  A    N M++ G  P+   YTT I G  K GD   A  
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           L  EM   G  P++ TYN +V+GLCK G++EEA +L+ +    G   D +TYT+++ A  
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
           + G++ + +++   ML KGL PT+VT+ VL++     G LE      + M  KGI PN  
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           T+N+L+   C    +  A  ++ DM   G+ P+  TY  L+  +C A N +EA  L++EM
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657

Query: 690 LDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
             +       T+S L+   L +   + A E  + +
Sbjct: 658 KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 159/468 (33%), Positives = 261/468 (55%), Gaps = 10/468 (2%)

Query: 203 GLLPDVKNCNRIIKVL-----RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG 257
           GL P+    N +I         D GFSV A+ +     + G++P+I+T+ T+++  CK G
Sbjct: 121 GLSPNTCTLNILINCFCLMQHVDLGFSVLAKVI-----KLGLQPTIITFTTLINGLCKAG 175

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
           E  +ALEL  +M  RGC P+  TY  +I G  + GE   A GLI+ M ++G +    +Y+
Sbjct: 176 EFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYS 235

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            +I    +  L+ EAL++   M  +G++PT+ +Y  LI GLC + R  +A     EM   
Sbjct: 236 TLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSL 295

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
           N++PDI++++ L+  +C+ GN+ EA  +   +    + P V+TYN+L+ G     ++  A
Sbjct: 296 NIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEA 355

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
           ++L + MI +G  PDV +Y+I++NG C +  +  A++ FNEM+ +GL P+  +YTT I  
Sbjct: 356 RKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHA 415

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
             +LG   EA  L ++M   G+ PDL TY+VL+ G CK G L +A  L R M G    P+
Sbjct: 416 FCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPN 475

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
            + YT +I +  + G+L   R LF+ +   GL P +  YT +I+     G L+ A   F 
Sbjct: 476 LVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFR 535

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
           +M+  G  PN  +YN +I G  + +   +A  L  +M ++G + ++ T
Sbjct: 536 KMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADEGT 583



 Score =  286 bits (732), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 165/516 (31%), Positives = 267/516 (51%), Gaps = 13/516 (2%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY-------RMMGEFGIKP 241
           ++  L  FN ML    LP +   N+++  +      V+ R+ Y       + M   G+ P
Sbjct: 71  IDDALASFNHMLHRKPLPCIIQFNKLLSAI------VRMRQYYDAVISLSKQMELAGLSP 124

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
           +  T N +++ FC    +     +L ++   G  P  +T+  LI G  + GE  QA  L 
Sbjct: 125 NTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELF 184

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
            DM+  G +   ++Y  II G  + G    A  L ++M   G  P + TY+ LI  LCK 
Sbjct: 185 DDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKD 244

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
             V++A   F  M  K + P ++SY +L+ G C      EA  + +E+ S N++P +VT+
Sbjct: 245 RLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTF 304

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           + LID  C+ G++  AQ + + M   G+ P+VITY  +++G      +  AR+ F+ M+ 
Sbjct: 305 SLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMIT 364

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
           +G +PD F+Y+  I G   +    EA +L  EM+ +G  P+ ++Y  L+H  C+LG L E
Sbjct: 365 RGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLRE 424

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A EL + M  +G++PD  TY+ ++    + G L +   LF  M    L P LV YT+LI 
Sbjct: 425 ARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILID 484

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
           +    G L  A   FSE+ V G++P+V  Y  +INGLC+   +D+A   F  MEE+G  P
Sbjct: 485 SMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPP 544

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           N+++Y ++I       +   A++L  EM D+    D
Sbjct: 545 NEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVAD 580



 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 144/482 (29%), Positives = 265/482 (54%), Gaps = 1/482 (0%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEA-LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
           P I+ +N +L +  +  +  +A + L  +M+  G SPN  T N+LI  F     ++    
Sbjct: 88  PCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFS 147

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
           ++  ++KLGL+ +  ++  +I G  + G   +AL L ++MV RG  P + TY  +I GLC
Sbjct: 148 VLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLC 207

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
           K G  + A     +M      PD+++Y+TL+   C+   + EA  +F  ++++ + PTVV
Sbjct: 208 KMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVV 267

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
           +Y +LI GLC +   + A  +   M +  I+PD++T++++++  CK GN+  A+     M
Sbjct: 268 SYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTM 327

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
              G++P+   Y + + G     +  EA +L + M+ +G  PD+ +Y++L++G C +  +
Sbjct: 328 TEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRI 387

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           +EA +L  +M+  G  P+ ++YT++IHA  ++G LR  R+LF +M   G  P L TY+VL
Sbjct: 388 DEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVL 447

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           +     +G L  AF  F  MQ   ++PN++ Y  LI+ +C+   ++ A  LF ++   G+
Sbjct: 448 LEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGL 507

Query: 660 LPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVE 719
            P+   YT +IN  C  G   EAL  +++M +    P+  +++ ++   L    +  AV+
Sbjct: 508 QPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQ 567

Query: 720 YL 721
            +
Sbjct: 568 LI 569


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  293 bits (750), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 176/551 (31%), Positives = 277/551 (50%), Gaps = 4/551 (0%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           + + LL +  + S ++    V+N+M   G+ PDV   N +IK L        A  +   M
Sbjct: 164 VFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEM 223

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
              G+ P   T+ T++  F +EG ++ AL +  +M   GCSP GVT NVLI G+ + G +
Sbjct: 224 SSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRV 283

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           E A G I+  +  G +    +YN  + G  + G +  AL + + M+  G  P + TYN +
Sbjct: 284 EDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTV 343

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           I  L K G + +A+    +M+ +  +PD  ++NTL+        + EA  L  EL  + L
Sbjct: 344 INCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGL 403

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P V T+N LI+ LC+ GD  +  +L E M + G  PD +TY I+++  C MG L  A +
Sbjct: 404 SPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALD 463

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
             NEM   G       Y T I    K     EA  + ++M A+G     +T+N L+ GLC
Sbjct: 464 LLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLC 523

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           K   +++A EL+ +MV +G  P++ITY SI+    + G++++  D+   M   G    +V
Sbjct: 524 KAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVV 583

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           TY  LI+     GR ++A      M++KGIRP    YN +I  L R   +  A  LF +M
Sbjct: 584 TYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREM 643

Query: 655 EEEGILPNKYTYTILINENCNAGN-WQEALRLYKEMLDREIEPDYCTHSAL---LLKQLD 710
            E G  P+  TY I+    C  G   +EA     EM+++   P++ +   L   LL    
Sbjct: 644 TEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGM 703

Query: 711 KDYKVHAVEYL 721
            DY + A+E +
Sbjct: 704 DDYLISAIELI 714



 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 152/510 (29%), Positives = 250/510 (49%), Gaps = 2/510 (0%)

Query: 194 LVFNKMLRN--GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLD 251
           LV N++  +  G+  D    N ++ VL +         VY  M   GI+P +VT NT++ 
Sbjct: 146 LVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIK 205

Query: 252 SFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKV 311
           + C+  +++ A+ +L EM   G +P+  T+  L+ GF   G +E A  +   M++ G   
Sbjct: 206 ALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSP 265

Query: 312 SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRF 371
           +  + N +I GY + G + +AL   ++ +  G  P   TYN  ++GLC+ G VS A    
Sbjct: 266 TGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVM 325

Query: 372 FEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY 431
             ML++   PD+ +YNT++    ++G + EA  + +++  R  +P   T+NTLI  L   
Sbjct: 326 DLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQ 385

Query: 432 GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAY 491
             LE A  L   +  +G+ PDV T+ I++N  CK+G+  +    F EM   G  PD   Y
Sbjct: 386 NRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTY 445

Query: 492 TTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
              I     +G    A  L  EM + G P   +TYN ++  LCK   +EEA E+  +M  
Sbjct: 446 NILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDA 505

Query: 552 DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLEL 611
            G     +T+ ++I    +   +    +L   M+++GL P  +TY  ++  +  +G ++ 
Sbjct: 506 QGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKK 565

Query: 612 AFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
           A      M   G   +V+TY  LINGLC+  R   A  L   M  +GI P    Y  +I 
Sbjct: 566 AADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQ 625

Query: 672 ENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
                 N ++AL L++EM +    PD  T+
Sbjct: 626 SLFRRNNLRDALNLFREMTEVGEPPDALTY 655



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 144/470 (30%), Positives = 219/470 (46%), Gaps = 37/470 (7%)

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLW-EMQGRGCSPNGVTYNVLITGFSRNGELE 295
           FG++   V +N +L+    EG   + LE ++ EM GRG  P+ VT N LI    R  ++ 
Sbjct: 156 FGVQADTVVFNHLLNVLV-EGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVR 214

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
            A  ++                                   EEM + GVAP   T+  L+
Sbjct: 215 TAVLML-----------------------------------EEMSSHGVAPDETTFTTLM 239

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
            G  + G +  A     +M+     P  ++ N L+ GYC+ G + +A     +  +    
Sbjct: 240 QGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFE 299

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P  VTYNT + GLC+ G +  A ++ + M+ +G  PDV TY  ++N   K G L  A+  
Sbjct: 300 PDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGI 359

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
            N+M+ +G  PD   + T I          EA  L  E+  KG  PD+ T+N+L++ LCK
Sbjct: 360 VNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCK 419

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
           +G       L  +M   G  PD +TY  +I     MG L    DL N M   G   + VT
Sbjct: 420 VGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVT 479

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           Y  +I A   + R+E A   F +M  +GI  + +T+N LI+GLC+ +RID A  L   M 
Sbjct: 480 YNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMV 539

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +EG+ PN  TY  ++   C  GN ++A  + + M     E D  T+  L+
Sbjct: 540 KEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLI 589



 Score =  225 bits (574), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 150/522 (28%), Positives = 249/522 (47%), Gaps = 4/522 (0%)

Query: 208 VKNCNRIIKVLRDNGFSVKA-REVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELL 266
           + + +R++  LR+      A R +   +      PS   Y  ++      G       L+
Sbjct: 53  ISDQDRLLAALREQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLV 112

Query: 267 WEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK---LGLKVSAHSYNPIICGY 323
            EM+  G     V     +  ++R    + A  L+ + L     G++     +N ++   
Sbjct: 113 REMRREGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVL 172

Query: 324 SEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
            E   L    ++  EM  RG+ P + T N LI  LC+  +V  A     EM    V PD 
Sbjct: 173 VEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDE 232

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
            ++ TL+ G+   G+I  A  +  ++      PT VT N LI+G C+ G +E A    + 
Sbjct: 233 TTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQ 292

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
            I  G  PD +TY   V+G C+ G++S A +  + ML++G  PD F Y T I    K G+
Sbjct: 293 EIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGE 352

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
             EA  +  +M+ +G  PD  T+N L+  L     LEEA +L R++   G  PD  T+  
Sbjct: 353 LDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNI 412

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           +I+A  ++GD   G  LF  M   G +P  VTY +LI    + G+L  A    +EM+  G
Sbjct: 413 LINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNG 472

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
              + +TYN +I+ LC+  RI++A  +F  M+ +GI  +  T+  LI+  C A    +A 
Sbjct: 473 CPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDAT 532

Query: 684 RLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
            L ++M+   ++P+  T++++L     +     A + LE++T
Sbjct: 533 ELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMT 574



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 145/331 (43%), Gaps = 13/331 (3%)

Query: 404 LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
           +L   L   +  P+   Y  ++  L   G  ++ + L   M  +G     +     V   
Sbjct: 75  MLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESY 134

Query: 464 CKMGNLSMAREFFNEMLRK---GLQPDRFAYTTQI-----AGELKLGDTSEAYRLQEEML 515
            ++     A +     L     G+Q D   +   +       +LKL ++     +  EM 
Sbjct: 135 ARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLES-----VYNEMT 189

Query: 516 AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLR 575
            +G  PD++T N L+  LC+   +  A  +L +M   G  PD  T+T+++   +E G + 
Sbjct: 190 GRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIE 249

Query: 576 RGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALI 635
               +   M+  G SPT VT  VLI+ +   GR+E A  Y  +    G  P+ +TYN  +
Sbjct: 250 AALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFV 309

Query: 636 NGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIE 695
           +GLC+   +  A  +   M +EG  P+ +TY  +IN     G   EA  +  +M+DR   
Sbjct: 310 HGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCL 369

Query: 696 PDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
           PD  T + L++    ++    A++    LT+
Sbjct: 370 PDTTTFNTLIVALSSQNRLEEALDLARELTV 400


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  293 bits (750), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 175/549 (31%), Positives = 283/549 (51%), Gaps = 26/549 (4%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y +   +E    + N+M+ + L  ++   N +I      G  V+A  +   M   G++P 
Sbjct: 359 YCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPD 418

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             +YN+++D +CK+G M +A E    M   G +   +TYN L+ GF   G ++ A  L  
Sbjct: 419 TYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWF 478

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            MLK G+  +  S + ++ G+ + G   +ALNL +E + RG+A    T+N +I GLCK  
Sbjct: 479 LMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIE 538

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R+ +A     +M +    PDII+Y TL  GYC+ G++  A  + +EL +    PT+  +N
Sbjct: 539 RMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFN 598

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           +LI G            +   M N+G+ P+ + Y  ++ G CK G+L  A   + EM+ K
Sbjct: 599 SLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEK 658

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL------------------- 523
           GL P+ F  ++ ++   + G   EA  + + ++     PD+                   
Sbjct: 659 GLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAG 718

Query: 524 -------ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
                  I +N+++ GLCKLG +E+A  LL  +   GF+ D+ TY+S+IH     G +  
Sbjct: 719 GNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDV 778

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
             DL + ML  GL+P +VTY  LI+     G L  A   F ++  KGI PN ITYN LI+
Sbjct: 779 AFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLID 838

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
             C+   I +A+ L   M EEGI P  +TY+ILIN  C  G  +EA++L  +M++  ++P
Sbjct: 839 KHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDP 898

Query: 697 DYCTHSALL 705
           +Y T+  L+
Sbjct: 899 NYVTYWTLI 907



 Score =  278 bits (711), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 167/542 (30%), Positives = 267/542 (49%), Gaps = 61/542 (11%)

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
             +  +++ +C+ G M++A  LL EM       N   YN++I G+ + G + +A  ++ +
Sbjct: 350 AVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHE 409

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M  +G++   +SYN ++ GY +KGL+ +A      M+  G A T  TYN L+ G C  G 
Sbjct: 410 MTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGS 469

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           + DA   +F ML+K + P+ IS +TLL G+ +SG   +A  L+ E  +R L     T+NT
Sbjct: 470 IDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNT 529

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR---------- 473
           +I+GLC+   +  A++L + M      PD+ITY  + +G CK+G++  A           
Sbjct: 530 VINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLG 589

Query: 474 -----EFFN--------------------EMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
                EFFN                    EM  +GL P+  AY   IAG  K GD   AY
Sbjct: 590 FAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAY 649

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD----------- 557
            L  EM+ KG  P+L   + LV    + G  +EAN +L+ +VG   IPD           
Sbjct: 650 NLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKV 709

Query: 558 ---------------HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
                           I +  +I    ++G +   ++L  ++  KG      TY+ LIH 
Sbjct: 710 ANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHG 769

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
            +A G +++AF     M   G+ PN++TYN+LI GLC+   + +A  LF  +  +GI PN
Sbjct: 770 CSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPN 829

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLE 722
             TY  LI+++C  G   EA +L + M++  I P   T+S L+     + Y   A++ L+
Sbjct: 830 AITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLD 889

Query: 723 SL 724
            +
Sbjct: 890 QM 891



 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 157/538 (29%), Positives = 261/538 (48%), Gaps = 27/538 (5%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           VF +M R G LPD      + K        V A E    M + G++ ++V Y+ +++ +C
Sbjct: 230 VFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYC 289

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK-LGLKVSA 313
           + G+  +A  +L  + GRG SPN VTY +L+ G+     +E+A G+++++ K   L V  
Sbjct: 290 EVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDE 349

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
             +  +I GY + G + +A  L  EMV   +   L  YNI+I G CK GR+ +A +   E
Sbjct: 350 AVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHE 409

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M    V PD  SYN+L+ GYC+ G + +AF  ++ +       T +TYN L+ G C  G 
Sbjct: 410 MTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGS 469

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           ++ A +L   M+ +GI P+ I+ + +++G  K G    A   + E L +GL  +   + T
Sbjct: 470 IDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNT 529

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            I G  K+    EA  L ++M     PPD+ITY  L  G CK+G ++ A+ +L ++   G
Sbjct: 530 VINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLG 589

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
           F P    + S+I          +  D+   M  +GLSP  V Y  LI      G L  A+
Sbjct: 590 FAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAY 649

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN----------- 662
             + EM  KG+ PN+   ++L++   R  + D+A  +  ++    ++P+           
Sbjct: 650 NLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKV 709

Query: 663 ---------------KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
                          K  + I+I   C  G  ++A  L  ++ D+    D  T+S+L+
Sbjct: 710 ANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLI 767



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 146/522 (27%), Positives = 252/522 (48%), Gaps = 34/522 (6%)

Query: 153 VNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCN 212
           V  H IL  + G G+         + L+  Y KK ++ +    +N MLRNG        N
Sbjct: 401 VEAHNILHEMTGVGVRP--DTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYN 458

Query: 213 RIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR 272
            ++K     G    A  ++ +M + GI P+ ++ +T+LD F K G+ ++AL L  E   R
Sbjct: 459 ALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLAR 518

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA 332
           G + N  T+N +I G  +   + +A  L+  M +        +Y  +  GY + G +  A
Sbjct: 519 GLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRA 578

Query: 333 LNLEEEMVTRGVAPTLATYNILIYG---LCKWGRVSDARHRFFEMLRKNVIPDIISYNTL 389
             +  E+   G APT+  +N LI G     + G+V+D     FEM  + + P+ ++Y  L
Sbjct: 579 SRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDI---LFEMSNRGLSPNTVAYGAL 635

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
           + G+C+ G++  A+ L+ E+  + LVP +   ++L+    R G  + A  + +N++   +
Sbjct: 636 IAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDM 695

Query: 450 LPDV--------------------------ITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           +PD+                          I + I++ G CK+G +  A+    ++  KG
Sbjct: 696 IPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKG 755

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
              D F Y++ I G    G    A+ L++ ML+ G  P+++TYN L++GLCK G L  A 
Sbjct: 756 FVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAV 815

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
            L +K+   G  P+ ITY ++I    + G +     L   M+ +G+ PT+ TY++LI+  
Sbjct: 816 SLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGL 875

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
             +G +E A     +M    + PN +TY  LI G  R   +D
Sbjct: 876 CTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCESVD 917



 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 137/521 (26%), Positives = 258/521 (49%), Gaps = 38/521 (7%)

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
           +++ L + G    A +V+  M   G + S+ + N++L+   + G++   + +  +MQ  G
Sbjct: 179 LLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQMQRAG 238

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
             P+  T  ++   + +   +  A   + +M K+G++V+  +Y+ ++ GY E G   +A 
Sbjct: 239 ALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDAR 298

Query: 334 NLEEEMVTRGVAPTLATYNIL------------------------------------IYG 357
            + + +  RG +P + TY +L                                    I G
Sbjct: 299 RMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVING 358

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
            C+ GR+ DA     EM+   +  ++  YN ++ GYC+ G + EA  +  E+    + P 
Sbjct: 359 YCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPD 418

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
             +YN+L+DG C+ G +  A +    M+  G     +TY  ++ G C +G++  A   + 
Sbjct: 419 TYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWF 478

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            ML+KG+ P+  + +T + G  K G T +A  L +E LA+G   +  T+N +++GLCK+ 
Sbjct: 479 LMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIE 538

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            + EA EL+ KM      PD ITY ++     ++GD+ R   + N +   G +PT+  + 
Sbjct: 539 RMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFN 598

Query: 598 VLIHAH-AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
            LI  H  A+   ++  + F EM  +G+ PN + Y ALI G C+   +  AY L+++M E
Sbjct: 599 SLITGHFIAKQHGKVNDILF-EMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIE 657

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           +G++PN +  + L++     G + EA  + + ++  ++ PD
Sbjct: 658 KGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPD 698



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 208/421 (49%), Gaps = 1/421 (0%)

Query: 277 NGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLE 336
           +  ++++L+   +  G+L+ A  +  +M  LG ++S  S N I+   ++ G L   + + 
Sbjct: 172 SAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVF 231

Query: 337 EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS 396
           E+M   G  P   T  I+    CK   V  A     EM +  V  ++++Y+ ++ GYC  
Sbjct: 232 EQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEV 291

Query: 397 GNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ-LKENMINQGILPDVIT 455
           G   +A  + D L  R   P +VTY  L+ G C   ++E A+  ++E   N+ ++ D   
Sbjct: 292 GQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAV 351

Query: 456 YTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML 515
           +  ++NG C+MG +  A    NEM+   LQ + F Y   I G  KLG   EA+ +  EM 
Sbjct: 352 FGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMT 411

Query: 516 AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLR 575
             G  PD  +YN LV G CK G + +A E    M+ +GF    +TY +++     +G + 
Sbjct: 412 GVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSID 471

Query: 576 RGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALI 635
               L+  ML+KG++P  ++ + L+      G+ E A   + E   +G+  N  T+N +I
Sbjct: 472 DALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVI 531

Query: 636 NGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIE 695
           NGLC++ R+ +A  L   M++    P+  TY  L +  C  G+   A R+  E+ +    
Sbjct: 532 NGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFA 591

Query: 696 P 696
           P
Sbjct: 592 P 592



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 129/532 (24%), Positives = 256/532 (48%), Gaps = 40/532 (7%)

Query: 116 TQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKI 175
           T  GV+ D + + ++++   + GL+  A+    T            ++  G ++  +   
Sbjct: 411 TGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNT------------MLRNGFAA--TTLT 456

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
            + LL  +     ++  L ++  ML+ G+ P+  +C+ ++     +G + KA  +++   
Sbjct: 457 YNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETL 516

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
             G+  +  T+NT+++  CK   M EA EL+ +M+   C P+ +TY  L +G+ + G+++
Sbjct: 517 ARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMD 576

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
           +A  ++ ++  LG   +   +N +I G+       +  ++  EM  RG++P    Y  LI
Sbjct: 577 RASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALI 636

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
            G CK G +  A + + EM+ K ++P++   ++L+  + R G   EA L+   L   +++
Sbjct: 637 AGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMI 696

Query: 416 PTV--------------------------VTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
           P +                          + +N +I GLC+ G +E A+ L  ++ ++G 
Sbjct: 697 PDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGF 756

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
           + D  TY+ +++G    G + +A +  + ML  GL P+   Y + I G  K G+ S A  
Sbjct: 757 VADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVS 816

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           L +++  KG  P+ ITYN L+   CK G + EA +L ++M+ +G  P   TY+ +I+   
Sbjct: 817 LFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLC 876

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
             G +     L + M+   + P  VTY  LI  +     +++  M   +  +
Sbjct: 877 TQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCESVDVPIMPLDQSTI 928



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 93/322 (28%), Positives = 169/322 (52%), Gaps = 1/322 (0%)

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
           S++ LL     +G +  A  +FDE+R+     ++ + N++++ L + GDL     + E M
Sbjct: 175 SFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQM 234

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
              G LPD  T  IM    CK+  +  A EF  EM + G++ +  AY   + G  ++G T
Sbjct: 235 QRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQT 294

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG-FIPDHITYTS 563
           ++A R+ + +  +GF P+++TY +LV G C   ++EEA  +++++  +   + D   + +
Sbjct: 295 NDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGA 354

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           +I+   +MG +     L N M+   L   L  Y ++I+ +   GR+  A     EM   G
Sbjct: 355 VINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVG 414

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
           +RP+  +YN+L++G C+   +++A+  +  M   G      TY  L+   C+ G+  +AL
Sbjct: 415 VRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDAL 474

Query: 684 RLYKEMLDREIEPDYCTHSALL 705
           RL+  ML + I P+  + S LL
Sbjct: 475 RLWFLMLKKGIAPNEISCSTLL 496


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  293 bits (750), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 176/554 (31%), Positives = 283/554 (51%), Gaps = 5/554 (0%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL +  + S ++    V+++M   G+ PDV   N ++K L        A  +   M   G
Sbjct: 156 LLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSG 215

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           + P   T+ T++  F +EG ++ AL +   M   GCSP  VT NVLI G+ + G +E A 
Sbjct: 216 VAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDAL 275

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
           G I+  +  G +    +YN  + G  + G +  AL + + MV  G  P + TYNI++  L
Sbjct: 276 GYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCL 335

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           CK G++ +A+    +M+ +  +PDI ++NTL+   C    + EA  L  ++  + L P V
Sbjct: 336 CKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDV 395

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
            T+N LI+ LC+ GD ++A +L E M + G  PD +TY  +++  C +G L  A +   E
Sbjct: 396 YTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKE 455

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M   G       Y T I G  K     EA  + ++M  +G   + IT+N L+ GLCK   
Sbjct: 456 MESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKR 515

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           +++AN+L+ +M+ +G  P++ITY SI+    + GD+++  D+   M   G    +VTY  
Sbjct: 516 IDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGT 575

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           LI+     GR ++A      M++KG+R     YN +I  L R      A  LF +M E G
Sbjct: 576 LINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVG 635

Query: 659 ILPNKYTYTILINENC-NAGNWQEALRLYKEMLDREIEPDYCTHSAL---LLKQLDKDYK 714
             P+ +TY I+    C   G+ +EA     EM+D+   P++ +   L   LL     DY 
Sbjct: 636 EPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYF 695

Query: 715 VHAVE-YLESLTLG 727
           + A+E  +E   LG
Sbjct: 696 IRAIEIIIEKADLG 709



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 147/470 (31%), Positives = 223/470 (47%), Gaps = 37/470 (7%)

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLW-EMQGRGCSPNGVTYNVLITGFSRNGELE 295
           FGI+   V YN +L+    EG   + LE ++ EM  RG  P+ VT+N L+    R     
Sbjct: 144 FGIQADTVVYNHLLNVLV-EGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCR----- 197

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
                            AH                 A+ + EEM + GVAP   T+  L+
Sbjct: 198 -----------------AHQVR-------------TAVLMLEEMSSSGVAPDETTFTTLM 227

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
            G  + G +  A      ML     P  ++ N L+ GYC+ G + +A     +  +    
Sbjct: 228 QGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFE 287

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P  +TYNT ++GLC+ G +  A ++ + M+ +G  PDV TY I+VN  CK G L  A+  
Sbjct: 288 PDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 347

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
            N+M+ +G  PD   + T I          EA  L  ++  KG  PD+ T+N+L++ LCK
Sbjct: 348 LNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCK 407

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
           +G  + A  L  +M   G  PD +TY ++I     +G L +  DL   M   G   + VT
Sbjct: 408 VGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVT 467

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           Y  +I     + R+E A   F +M ++GI  N IT+N LI+GLC+ +RID A  L   M 
Sbjct: 468 YNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMI 527

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            EG+ PN  TY  ++   C  G+ ++A  + + M     E D  T+  L+
Sbjct: 528 SEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLI 577



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 113/391 (28%), Positives = 183/391 (46%), Gaps = 17/391 (4%)

Query: 114 VETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCV-S 172
           V  Q G   D F +  ++  L ++G L  A             GIL+ ++  G   C+  
Sbjct: 315 VMVQEGHDPDVFTYNIVVNCLCKNGQLEEA------------KGILNQMVERG---CLPD 359

Query: 173 IKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR 232
           I   + L++     + +E+ L +  ++   GL PDV   N +I  L   G    A  ++ 
Sbjct: 360 ITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFE 419

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
            M   G  P  VTYNT++D+ C  G++ +AL+LL EM+  GC  + VTYN +I G  +  
Sbjct: 420 EMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKM 479

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
            +E+A  +   M   G+  +A ++N +I G  +   + +A  L  +M++ G+ P   TYN
Sbjct: 480 RIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYN 539

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
            ++   CK G +  A      M       D+++Y TL+ G C++G    A  L   +R +
Sbjct: 540 SILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIK 599

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK-MGNLSM 471
            +  T   YN +I  L R  +   A  L   M   G  PD  TY I+  G C+  G++  
Sbjct: 600 GMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIRE 659

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
           A +F  EM+ KG  P+  ++     G L LG
Sbjct: 660 AFDFLLEMVDKGFIPEFSSFRMLAEGLLNLG 690



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 78/172 (45%)

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
           G   D + Y  +++  +E   ++    +++ M  +G+ P +VT+  L+ A     ++  A
Sbjct: 145 GIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTA 204

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
            +   EM   G+ P+  T+  L+ G      I  A  +   M E G  P K T  +LIN 
Sbjct: 205 VLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLING 264

Query: 673 NCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
            C  G  ++AL   ++ +    EPD  T++  +       +  HA++ ++ +
Sbjct: 265 YCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVM 316


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  293 bits (750), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 188/635 (29%), Positives = 312/635 (49%), Gaps = 35/635 (5%)

Query: 93   LVRVLNRIREKPRIALRFFRWVETQPGVKRDEFV--FCTILEILIESGLLRSAYWVVETV 150
            L+ VL +I+   R+ L FF W  +    +RD  +   C ++ + + S  L+ A  ++ + 
Sbjct: 533  LIWVLMKIKCDYRLVLDFFDWARS----RRDSNLESLCIVIHLAVASKDLKVAQSLISSF 588

Query: 151  VCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKN 210
                   + D  +          +  DLL+  Y       +   VF              
Sbjct: 589  WERPKLNVTDSFV----------QFFDLLVYTYKDWGSDPRVFDVF-------------- 624

Query: 211  CNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG-EMQEALELLWEM 269
                 +VL D G   +AR V+  M  +G+  S+ + N  L    K+  +   A+ +  E 
Sbjct: 625  ----FQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREF 680

Query: 270  QGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLL 329
               G   N  +YN++I    + G +++A  L+  M   G      SY+ ++ GY   G L
Sbjct: 681  PEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGEL 740

Query: 330  VEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTL 389
             +   L E M  +G+ P    Y  +I  LC+  ++++A   F EM+R+ ++PD + Y TL
Sbjct: 741  DKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTL 800

Query: 390  LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
            + G+C+ G+I  A   F E+ SR++ P V+TY  +I G C+ GD+  A +L   M  +G+
Sbjct: 801  IDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 860

Query: 450  LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
             PD +T+T ++NG CK G++  A    N M++ G  P+   YTT I G  K GD   A  
Sbjct: 861  EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 920

Query: 510  LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
            L  EM   G  P++ TYN +V+GLCK G++EEA +L+ +    G   D +TYT+++ A  
Sbjct: 921  LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 980

Query: 570  EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
            + G++ + +++   ML KGL PT+VT+ VL++     G LE      + M  KGI PN  
Sbjct: 981  KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 1040

Query: 630  TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
            T+N+L+   C    +  A  ++ DM   G+ P+  TY  L+  +C A N +EA  L++EM
Sbjct: 1041 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 1100

Query: 690  LDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
              +       T+S L+   L +   + A E  + +
Sbjct: 1101 KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 1135


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  293 bits (749), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 180/611 (29%), Positives = 300/611 (49%), Gaps = 25/611 (4%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHG---ILDVLI 163
           A+ FFRW   Q G + D F +  ++ +L+        Y + E ++   +       ++LI
Sbjct: 102 AISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILI 161

Query: 164 --------GGGLSSCVSI--------KILDLLLLI--YTKKSMVEQCLLVFNKMLRNGLL 205
                        +C  I         +   L+L+    K  M E+   VF++M+  G +
Sbjct: 162 RSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFV 221

Query: 206 P-DVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALE 264
           P D      +++ L       +AREV+  M + G  P  + YNTM+D   K G  QEAL+
Sbjct: 222 PPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALK 281

Query: 265 LLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYS 324
           +L  M  + C P  VTY +L+    + G LE+A  L R M   G + ++  Y  +I G++
Sbjct: 282 VLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFA 341

Query: 325 EKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDII 384
           + G + EA +L +EMV  G  P + T+ ++I GLCK G    A   F EM+R    P+++
Sbjct: 342 KSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVV 401

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
           +Y T++ G  + G +  AF +   + +    P  VTY  L+DG C+ G L+ A QL + +
Sbjct: 402 TYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDEL 461

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP-DRFAYTTQIAGELKLGD 503
                 P++  Y+ +VNG C  G++    +   E  +   +  D     + I G  K G 
Sbjct: 462 DKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGR 521

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL--GSLEEANELLRKMVGDGFIPDHITY 561
             EA R+ + M+++G  PD  TYN+L++GLC+     +E A  LL  +   G++PD +TY
Sbjct: 522 LDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTY 581

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
           T +     ++G++ R   +      +G +  +V YT L      +G+++ A   F EM  
Sbjct: 582 TPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVR 641

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
           +G  P+   Y  +INGL ++++++ A   F +M  +G  P   TYT L+   C+AGN  E
Sbjct: 642 QGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDE 701

Query: 682 ALRLYKEMLDR 692
           A   ++ ML R
Sbjct: 702 AFHRFESMLAR 712



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 167/535 (31%), Positives = 264/535 (49%), Gaps = 44/535 (8%)

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGE-FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQ 270
           + +  VLR    +  A   +R  GE  G +  + TYN +++    E    +   +  EM 
Sbjct: 87  SHVAAVLRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEML 146

Query: 271 GRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLV 330
             G +PN  ++N+LI  F+R    + A      M +   K   H++  ++    + G+  
Sbjct: 147 KAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDE 206

Query: 331 EALNLEEEMVTRG-VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTL 389
           +A  +  EM+  G V P  A +  ++  L K  RV +AR  F +M +    PD I+YNT+
Sbjct: 207 KAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTM 266

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL--------- 440
           + G  ++G+  EA  + D + ++  VPT VTY  L++ LC+ G LE A++L         
Sbjct: 267 IDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGF 326

Query: 441 --------------------KE------NMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
                               KE       M+  G  PDVIT+T+M++G CK GN   A +
Sbjct: 327 RPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAK 386

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
            F EM+R G +P+   YTT I G  K+G  + A+R+ + M+A G  PD +TY  L+ G C
Sbjct: 387 SFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFC 446

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG-RDLF--NNMLRKGLSP 591
           KLG L+EA +LL ++      P+   Y+S+++   + G + +   DLF  +    + L P
Sbjct: 447 KLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDP 506

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR--RIDQAYG 649
            L     +I      GRL+ A   F  M  +G +P+  TYN LINGLCR R  R+++A+ 
Sbjct: 507 GLCCS--IIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFA 564

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
           L  D+E+ G LP+  TYT L    C  G    A+++ +E   R    D   ++AL
Sbjct: 565 LLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTAL 619



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 145/480 (30%), Positives = 238/480 (49%), Gaps = 11/480 (2%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K   +++   +F++M+  G  PDV     +I  L  +G   +A + +  M   G KP+
Sbjct: 340 FAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPN 399

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +VTY T++    K G +  A  ++  M   GC P+ VTY  L+ GF + G L++A  L+ 
Sbjct: 400 VVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLD 459

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALN-LEEEMVTRGVAPTL--ATYNILIYGLC 359
           ++ K     +   Y+ ++ G  + G + + L+ L E+  ++  A TL       +I GLC
Sbjct: 460 ELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQ--SKAAAETLDPGLCCSIIVGLC 517

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS--GNIGEAFLLFDELRSRNLVPT 417
           K GR+ +A   F  M+ +   PD  +YN L+ G CRS    +  AF L  +L     +P 
Sbjct: 518 KTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPD 577

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
            VTY  L  GLC+ G+++ A ++ E   ++G   DV+ YT +  G C  G +  A   F 
Sbjct: 578 AVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQ 637

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           EM+R+G  PD  AY   I G +K+    +A +  +EM+ KG  P + TY  LV  LC  G
Sbjct: 638 EMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAG 697

Query: 538 SLEEANELLRKMVGDG-FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           +++EA      M+  G  +   + Y ++IH   +   +     LF +M+ +G  PT VT 
Sbjct: 698 NVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTS 757

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
             L       G+ E A     EM   G  P+  T+ A+++G   LR+ D++  L   ++E
Sbjct: 758 ASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDG---LRKSDESGKLLKLVQE 814



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 120/357 (33%), Positives = 181/357 (50%), Gaps = 1/357 (0%)

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           TYN L+  L      S       EML+  + P+  S+N L+  + R+    +A   F+ +
Sbjct: 121 TYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIM 180

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP-DVITYTIMVNGSCKMGN 468
           + +   P + T+  L+D LC+ G  E A ++   M+  G +P D   +T MV    K   
Sbjct: 181 KRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKR 240

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
           +  ARE F +M + G  PD  AY T I G  K G   EA ++ + MLAK   P  +TY +
Sbjct: 241 VKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGI 300

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           LV+ LCK G+LE A EL R M   GF P+ + YTS+IH   + G ++    LF+ M+  G
Sbjct: 301 LVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAG 360

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
             P ++T+TV+I      G  E A   F EM   G +PNV+TY  +I GL ++ R+  A+
Sbjct: 361 YRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAF 420

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            +   M   G  P+  TY  L++  C  G   EA +L  E+      P+   +S+L+
Sbjct: 421 RIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLV 477



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 140/296 (47%), Gaps = 36/296 (12%)

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT--------TQIAG 497
             G   DV TY  ++N      N S       EML+ G+ P+ F++         T+ A 
Sbjct: 112 QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRAD 171

Query: 498 E---------------------------LKLGDTSEAYRLQEEMLAKGF-PPDLITYNVL 529
           +                            K G   +A+ +  EM+A GF PPD   +  +
Sbjct: 172 DAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAM 231

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           V  L K   ++EA E+  +M   GF PD I Y ++I    + G  +    + +NML K  
Sbjct: 232 VRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKAC 291

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
            PT VTY +L+++    G LE A   F  M   G RPN + Y +LI+G  +  R+ +A  
Sbjct: 292 VPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACS 351

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           LF +M E G  P+  T+T++I+  C +GN+++A + ++EM+    +P+  T++ ++
Sbjct: 352 LFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTII 407


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  293 bits (749), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 180/624 (28%), Positives = 305/624 (48%), Gaps = 18/624 (2%)

Query: 104 PRIALRFFRWVETQPGVKRDEFVFCTILEILIESG-----------LLRSAYWVVETVVC 152
           P+ AL F  W+   P  K   + + ++L +LI +G           +++S   V + +  
Sbjct: 103 PKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYV 162

Query: 153 VNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCN 212
           +++   ++      L   + I   + LL    +  +V++   V+ +ML + + P++   N
Sbjct: 163 LDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYN 222

Query: 213 RIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR 272
           +++      G   +A +    + E G+ P   TY +++  +C+  ++  A ++  EM  +
Sbjct: 223 KMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLK 282

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII---CGYSEKGLL 329
           GC  N V Y  LI G      +++A  L   M       +  +Y  +I   CG   K   
Sbjct: 283 GCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKS-- 340

Query: 330 VEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTL 389
            EALNL +EM   G+ P + TY +LI  LC   +   AR    +ML K ++P++I+YN L
Sbjct: 341 -EALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNAL 399

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
           + GYC+ G I +A  + + + SR L P   TYN LI G C+  ++  A  +   M+ + +
Sbjct: 400 INGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKV 458

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
           LPDV+TY  +++G C+ GN   A    + M  +GL PD++ YT+ I    K     EA  
Sbjct: 459 LPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACD 518

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           L + +  KG  P+++ Y  L+ G CK G ++EA+ +L KM+    +P+ +T+ ++IH   
Sbjct: 519 LFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLC 578

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
             G L+    L   M++ GL PT+ T T+LIH     G  + A+  F +M   G +P+  
Sbjct: 579 ADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAH 638

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           TY   I   CR  R+  A  +   M E G+ P+ +TY+ LI    + G    A  + K M
Sbjct: 639 TYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698

Query: 690 LDREIEPDYCTHSALLLKQLDKDY 713
            D   EP   T  +L+   L+  Y
Sbjct: 699 RDTGCEPSQHTFLSLIKHLLEMKY 722



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 159/519 (30%), Positives = 263/519 (50%), Gaps = 20/519 (3%)

Query: 191 QCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTML 250
           + L +  +M   G+ P++     +I  L       KARE+   M E G+ P+++TYN ++
Sbjct: 341 EALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALI 400

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
           + +CK G +++A++++  M+ R  SPN  TYN LI G+ ++  + +A G++  ML+  + 
Sbjct: 401 NGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVL 459

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
               +YN +I G    G    A  L   M  RG+ P   TY  +I  LCK  RV +A   
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDL 519

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
           F  + +K V P+++ Y  L+ GYC++G + EA L+ +++ S+N +P  +T+N LI GLC 
Sbjct: 520 FDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCA 579

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
            G L+ A  L+E M+  G+ P V T TI+++   K G+   A   F +ML  G +PD   
Sbjct: 580 DGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHT 639

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           YTT I    + G   +A  +  +M   G  PDL TY+ L+ G   LG    A ++L++M 
Sbjct: 640 YTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMR 699

Query: 551 GDGFIPDHITYTSIIHASLEMG-DLRRGRD-----------------LFNNMLRKGLSPT 592
             G  P   T+ S+I   LEM    ++G +                 L   M+   ++P 
Sbjct: 700 DTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPN 759

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQV-KGIRPNVITYNALINGLCRLRRIDQAYGLF 651
             +Y  LI      G L +A   F  MQ  +GI P+ + +NAL++  C+L++ ++A  + 
Sbjct: 760 AKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVV 819

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
            DM   G LP   +  +LI      G  +    +++ +L
Sbjct: 820 DDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLL 858



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 135/471 (28%), Positives = 229/471 (48%), Gaps = 19/471 (4%)

Query: 186 KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVT 245
           KS V + + V NKML   +LPDV   N +I     +G    A  +  +M + G+ P   T
Sbjct: 440 KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWT 499

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           Y +M+DS CK   ++EA +L   ++ +G +PN V Y  LI G+ + G++++A  ++  ML
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
                 ++ ++N +I G    G L EA  LEE+MV  G+ PT++T  ILI+ L K G   
Sbjct: 560 SKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFD 619

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
            A  RF +ML     PD  +Y T +  YCR G + +A  +  ++R   + P + TY++LI
Sbjct: 620 HAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN-----------GS----CKMGNL- 469
            G    G    A  + + M + G  P   T+  ++            GS    C M N+ 
Sbjct: 680 KGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMM 739

Query: 470 --SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA-KGFPPDLITY 526
                 E   +M+   + P+  +Y   I G  ++G+   A ++ + M   +G  P  + +
Sbjct: 740 EFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVF 799

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           N L+   CKL    EA +++  M+  G +P   +   +I    + G+  RG  +F N+L+
Sbjct: 800 NALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQ 859

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
            G     + + ++I     +G +E  +  F+ M+  G + +  TY+ LI G
Sbjct: 860 CGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 149/296 (50%), Gaps = 15/296 (5%)

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF---------AYTTQ 494
           +IN G +  V    +++  SC     ++   +  ++ RK  + +RF          Y T 
Sbjct: 133 LINNGYVGVVFKIRLLMIKSCDSVGDAL---YVLDLCRKMNKDERFELKYKLIIGCYNTL 189

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           +    + G   E  ++  EML     P++ TYN +V+G CKLG++EEAN+ + K+V  G 
Sbjct: 190 LNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGL 249

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            PD  TYTS+I    +  DL     +FN M  KG     V YT LIH      R++ A  
Sbjct: 250 DPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMD 309

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F +M+     P V TY  LI  LC   R  +A  L  +MEE GI PN +TYT+LI+  C
Sbjct: 310 LFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLC 369

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALL---LKQLDKDYKVHAVEYLESLTLG 727
           +   +++A  L  +ML++ + P+  T++AL+    K+   +  V  VE +ES  L 
Sbjct: 370 SQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  293 bits (749), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 168/481 (34%), Positives = 256/481 (53%), Gaps = 2/481 (0%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           AR++Y  M   GI+PS++T+NTM++  CK+G +QEA  ++  +      PN  TY  LI 
Sbjct: 186 ARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLIL 245

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G  RN  L+ A  +   M+K G   ++ +Y+ +I G   +G L EA+++ EEMV +G+ P
Sbjct: 246 GHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEP 305

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
           T+ TY I +  LC  G  S+A     +M ++  +P+I ++  L+ G  R G    A  L+
Sbjct: 306 TVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLY 365

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
            ++ +  LVPT VTYN LI+ LC  G  E A  + + M++ G LP   TY  ++   C M
Sbjct: 366 HKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLM 425

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G++  A   F++ML+ G  P+   Y T I G  K G+ + A RL E M   G  PD  TY
Sbjct: 426 GDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTY 485

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
             L+ G  + G LE A  L   M+  G  P+H+TYT+II     +  +     LF  M+ 
Sbjct: 486 TELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVE 545

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
            G  P+  TY V+I   +    +  A  +  +M  +G+ PNVITY + I+GLCR  R   
Sbjct: 546 SGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGL 605

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA--LRLYKEMLDREIEPDYCTHSAL 704
           A+ +F +ME+    PN YTY+ LI   C  G  ++A    L   +     EP+  T++ L
Sbjct: 606 AFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTL 665

Query: 705 L 705
           +
Sbjct: 666 V 666



 Score =  288 bits (738), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 200/699 (28%), Positives = 322/699 (46%), Gaps = 23/699 (3%)

Query: 32  FSVHTYPSISESNNKDSVLNPESESYYKELIISTVEEKPWAFCNNRWVSDHFQAVVS--- 88
           F++ + P  S      S  NP  E   K   IST+   P      +W        +S   
Sbjct: 26  FNLSSEPHPSSPLPISSTTNPFPELVSK---ISTILSSP------KWEHSSELCHLSPKL 76

Query: 89  DPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVE 148
            P  +V +L   +    + LRFF W+  +   K D   F ++L  L+   L   A  V  
Sbjct: 77  KPHHVVNILQTHKNTDSV-LRFFFWISRRKFFKHDMSCFVSMLNRLVRDRLFAPADHVRI 135

Query: 149 TVV--CVNMHGILDVL-----IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLR 201
            ++  C N   +  V      I        ++     LL+   K  MV+    ++ KML 
Sbjct: 136 LMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLN 195

Query: 202 NGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQE 261
           +G+ P +   N +I +L   G   +A+ +   +  +   P+  TY +++   C+   +  
Sbjct: 196 SGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDL 255

Query: 262 ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC 321
           A  +   M   GC PN VTY+ LI G    G LE+A  ++ +M++ G++ + ++Y   + 
Sbjct: 256 AFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLV 315

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
              + G   EA+ L  +M  RG  P + T+  LI GL + G+   A   + +ML   ++P
Sbjct: 316 SLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVP 375

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
             ++YN L+   C  G    AF +F  + S   +P+  TYN +I   C  GD++ A  + 
Sbjct: 376 TTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIF 435

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
           + M+  G  P+VITY  ++ G CK GNL+ A      M   GL+PD + YT  I+G  + 
Sbjct: 436 DKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRG 495

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
           G    A  L   M+  G  P+ +TY  ++ G   L  +++A  L  KMV  G +P   TY
Sbjct: 496 GKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTY 555

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
             +I    +   +    +    M+++GL P ++TYT  I      GR  LAF  F EM+ 
Sbjct: 556 NVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEK 615

Query: 622 KGIRPNVITYNALINGLCRLRRIDQA--YGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
           +   PN+ TY++LI GLC+  R + A  Y L   +   G  PN  TYT L+   C  G  
Sbjct: 616 RNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRC 675

Query: 680 QEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAV 718
            EA +L   M  + ++P    + ALL+ +  K+ KV + 
Sbjct: 676 YEADQLVVSMQKKGLQPSEEIYRALLIGEC-KNLKVESA 713



 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 169/550 (30%), Positives = 273/550 (49%), Gaps = 5/550 (0%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+L + +   ++    +F++M+++G  P+    + +I  L   G   +A ++   M + G
Sbjct: 243 LILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKG 302

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           I+P++ TY   L S C  G   EA+ELL +M+ RGC PN  T+  LI+G SR+G+ E A 
Sbjct: 303 IEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAI 362

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
           GL   ML  GL  +  +YN +I     +G    A  + + M++ G  P+  TYN +I   
Sbjct: 363 GLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCF 422

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C  G +  A   F +ML+    P++I+YNTL+YGYC+ GN+  A  L + ++   L P  
Sbjct: 423 CLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDA 482

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
            TY  LI G  R G LE A  L   M+  GI P+ +TYT +++G   +  +  A   F +
Sbjct: 483 WTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWK 542

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M+  G  P    Y   I+G  K    SEA     +M+ +G  P++ITY   + GLC+ G 
Sbjct: 543 MVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGR 602

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR--DLFNNMLRKGLSPTLVTY 596
              A ++  +M    + P+  TY+S+I+   + G        +L   +   G  P + TY
Sbjct: 603 TGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTY 662

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
           T L+      GR   A      MQ KG++P+   Y AL+ G C+  +++ A  +F  M+ 
Sbjct: 663 TTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDT 722

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL---LLKQLDKDY 713
            G   +   Y  LI   C     +EA  +++ ML++    D    + L   LLK+ + D 
Sbjct: 723 LGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDL 782

Query: 714 KVHAVEYLES 723
            +  +  +ES
Sbjct: 783 CLKLLHVMES 792



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 137/412 (33%), Positives = 213/412 (51%), Gaps = 2/412 (0%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           E    +F  ML +G LP  +  N IIK     G   KA  ++  M + G  P+++TYNT+
Sbjct: 394 ETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTL 453

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           +  +CK+G +  A+ LL  M+G G  P+  TY  LI+GFSR G+LE A  L   M++ G+
Sbjct: 454 IYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGI 513

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
             +  +Y  II GY     + +AL L  +MV  G  P+  TYN++I G  K   +S+A +
Sbjct: 514 SPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAEN 573

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
              +M+++ ++P++I+Y + + G CR+G  G AF +F E+  RN  P + TY++LI GLC
Sbjct: 574 FCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLC 633

Query: 430 RYGDLEVAQ--QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           + G  E A+   L   + + G  P+V TYT +V G C  G    A +    M +KGLQP 
Sbjct: 634 QEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPS 693

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              Y   + GE K      A  +   M   GF   L  Y  L+  LCK   +EEA  + +
Sbjct: 694 EEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQ 753

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
            M+   +  D + +T ++   L+ G+      L + M  +  +    TY +L
Sbjct: 754 TMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVML 805



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 137/481 (28%), Positives = 231/481 (48%), Gaps = 4/481 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
           +  KM + G +P+++    +I  L RD  F +     ++M+ + G+ P+ VTYN +++  
Sbjct: 329 LLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLAD-GLVPTTVTYNALINQL 387

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           C EG  + A  +   M   G  P+  TYN +I  F   G++++A  +   MLK G   + 
Sbjct: 388 CVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNV 447

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
            +YN +I GY ++G L  A+ L E M   G+ P   TY  LI G  + G++  A   F+ 
Sbjct: 448 ITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYG 507

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M+   + P+ ++Y  ++ GY     + +A  LF ++     +P+  TYN +I G  +   
Sbjct: 508 MMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNS 567

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           +  A+     M+ QG+LP+VITYT  ++G C+ G   +A + F+EM ++   P+ + Y++
Sbjct: 568 ISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSS 627

Query: 494 QIAGELKLG--DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
            I G  + G  + +E Y L   +   G  P++ TY  LV GLC  G   EA++L+  M  
Sbjct: 628 LIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQK 687

Query: 552 DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLEL 611
            G  P    Y +++    +   +    ++F +M   G    L  Y  LI A      +E 
Sbjct: 688 KGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEE 747

Query: 612 AFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
           A   F  M  K    + + +  L++GL +    D    L   ME      N  TY +L  
Sbjct: 748 AQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLAR 807

Query: 672 E 672
           E
Sbjct: 808 E 808



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 184/417 (44%), Gaps = 11/417 (2%)

Query: 129 TILEILIESGLLRSAYWVVETVVCVNMHG-------ILDVLIGGGLSSCVSIKILDLLLL 181
           TI + ++  G L S     E + C  + G       I D ++  G  S  ++   + L+ 
Sbjct: 398 TIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAG--SSPNVITYNTLIY 455

Query: 182 IYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKP 241
            Y K+  +   + +   M  NGL PD      +I      G    A  ++  M E GI P
Sbjct: 456 GYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISP 515

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
           + VTY  ++D +    ++ +AL L W+M   G  P+  TYNV+I+GFS+   + +A    
Sbjct: 516 NHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFC 575

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
             M+K GL  +  +Y   I G    G    A  +  EM  R   P L TY+ LIYGLC+ 
Sbjct: 576 GKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQE 635

Query: 362 GRVSDAR--HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
           GR  DA   +    +      P++ +Y TL+ G C  G   EA  L   ++ + L P+  
Sbjct: 636 GRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEE 695

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
            Y  L+ G C+   +E A  +  +M   G    +  Y  ++   CK   +  A+  F  M
Sbjct: 696 IYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTM 755

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           L K    D  A+T  + G LK G+T    +L   M ++    +  TY +L   L  L
Sbjct: 756 LEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLARELSAL 812



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 127/275 (46%), Gaps = 6/275 (2%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           S +  ++++  ++K + + +      KM++ GLLP+V      I  L  NG +  A +++
Sbjct: 551 SSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIF 610

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA--LELLWEMQGRGCSPNGVTYNVLITGFS 289
             M +    P++ TY++++   C+EG  ++A    LL  +   GC PN  TY  L+ G  
Sbjct: 611 HEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLC 670

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
             G   +A  L+  M K GL+ S   Y  ++ G  +   +  ALN+   M T G    L+
Sbjct: 671 GEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLS 730

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
            Y  LI  LCK   + +A+  F  ML K+   D +++  LL G  + G       L   +
Sbjct: 731 DYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVM 790

Query: 410 RSRNLVPTVVTYNTLIDGL----CRYGDLEVAQQL 440
            SRN      TY  L   L    C     +++QQL
Sbjct: 791 ESRNCTLNFQTYVMLARELSALDCAIKIPQISQQL 825



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 39/216 (18%)

Query: 544 ELLRKMVGDG-FIP-DHITYTSIIHASLEMGDLRRGRDLFNNMLRK-GLSPTLVTYTVLI 600
            +L ++V D  F P DH+    +I +    G+++R     + +  K     TL ++T L+
Sbjct: 116 SMLNRLVRDRLFAPADHVRIL-MIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLL 174

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN------------------------ 636
                   ++LA   + +M   GIRP+++T+N +IN                        
Sbjct: 175 IQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAY 234

Query: 637 -----------GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
                      G CR   +D A+ +F  M ++G  PN  TY+ LIN  C+ G  +EA+ +
Sbjct: 235 PNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDM 294

Query: 686 YKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYL 721
            +EM+ + IEP   T++  L+   D      AVE L
Sbjct: 295 LEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELL 330


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  293 bits (749), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 156/479 (32%), Positives = 266/479 (55%), Gaps = 1/479 (0%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A E++  M E GI P+ VTY  +++  CK G M +A E+  +M+ +  SP     N LI 
Sbjct: 348 ALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIR 407

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G+ +    E+A  L  + +  G+  +  +YN ++    ++G + EA ++ E+MV +GV P
Sbjct: 408 GYLKARSPEEASKLFDEAVACGI-ANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRP 466

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
           ++ +YN +I G C+ G +  A   F EML K + P++I+Y+ L+ GY + G+   AF L+
Sbjct: 467 SVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLY 526

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
           D +R  N+ P+  T N +I+GLC+ G    +Q   + ++ +G +P  +TY  +++G  K 
Sbjct: 527 DRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKE 586

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G+++ A   + EM + G+ P+ F YT  I G  K  +   A ++ +EM  KG   D+  Y
Sbjct: 587 GSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVY 646

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
             L+ G C+ G +  A++LL ++   G  P+ + Y+S+I    ++ ++     L   M+ 
Sbjct: 647 CALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMIN 706

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
           +G+   L  YT LI      G+L  A   ++EM  KGI P++ITY+ LI+GLC   +++ 
Sbjct: 707 EGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLEN 766

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           A  +  DM+ + + P  + Y  LI  +   GN QEA RL+ EMLD+ + PD  T+  L+
Sbjct: 767 AQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILV 825



 Score =  289 bits (740), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 178/583 (30%), Positives = 301/583 (51%), Gaps = 56/583 (9%)

Query: 110 FFRWVETQPGVKRDEFVFCTILEILIES-------GLLRSAY---WVVETV-------VC 152
           +FR  + + GV+ D   +  ++E + +        GLLR      WV   V       VC
Sbjct: 246 WFREAKNK-GVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVC 304

Query: 153 VNMHGILD-VLIGGGLSSC---VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDV 208
           +    +L+ V + G + SC   +++ +   L+  Y K+  ++  L +F+KM  NG+ P+ 
Sbjct: 305 MKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNN 364

Query: 209 KNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV------------------------ 244
                II+    NG   KA E+Y  M    I P++                         
Sbjct: 365 VTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDE 424

Query: 245 ----------TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
                     TYN++L   CKEG+M EA  +  +M  +G  P+ V+YN +I G  + G++
Sbjct: 425 AVACGIANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDM 484

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           + A G+  +ML+ GLK +  +Y+ ++ GY +KG    A  L + M    +AP+  T NI+
Sbjct: 485 DSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNII 544

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           I GLCK GR S+++ R  +++++  IP  ++YN ++ G+ + G++  A  ++ E+    +
Sbjct: 545 INGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGV 604

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P V TY  LI+G C+  ++++A ++ + M N+GI  DV  Y  +++G C+ G++  A +
Sbjct: 605 SPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQ 664

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
             +E+   GL P++  Y++ I+G  KL +   A  L + M+ +G P DL  Y  L+ GL 
Sbjct: 665 LLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLL 724

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           K G L  A+EL  +M+  G +PD ITY+ +IH     G L   + +  +M RK ++PT+ 
Sbjct: 725 KEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVF 784

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
            Y  LI  H   G L+ AF   +EM  KG+ P+  TY+ L+NG
Sbjct: 785 IYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNG 827



 Score =  283 bits (724), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 188/670 (28%), Positives = 323/670 (48%), Gaps = 44/670 (6%)

Query: 101 REKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESG-LLRSAYWVVETVVCVNMHGIL 159
           +  P+ AL +F W   + G+ +     C +L IL +S      A  ++      +   + 
Sbjct: 75  QNDPQSALSYFTWASQKRGLIKSVDALCVLLHILTKSTETCGKARNLLNRFASDDWGPVP 134

Query: 160 DVLIGGGLSSCVSI------KILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNR 213
            V++   + S   +      ++ + LL  Y K   +   +  FN ++   ++P +   N 
Sbjct: 135 SVVVARLIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNI 194

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQE------------ 261
            +  L  N    +AR+VY  M   G+K    T + M+ +  +EG+++E            
Sbjct: 195 FLSELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKG 254

Query: 262 -----------------------ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
                                  AL LL EM+ +G  P+ V +  +I    + G++ +A 
Sbjct: 255 VELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAV 314

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            +  +ML  G  ++      ++ GY ++G L  AL L ++M   G+ P   TY ++I   
Sbjct: 315 KVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWC 374

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           CK G +  A   + +M  K++ P + + N+L+ GY ++ +  EA  LFDE  +   +  V
Sbjct: 375 CKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACG-IANV 433

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
            TYN+L+  LC+ G +  A  + E M+ +G+ P V++Y  M+ G C+ G++  A   F E
Sbjct: 434 FTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVE 493

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           ML KGL+P+   Y+  + G  K GDT  A+ L + M  +   P   T N++++GLCK G 
Sbjct: 494 MLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGR 553

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
             E+ + L+K+V +GFIP  +TY  II   ++ G +     ++  M + G+SP + TYT 
Sbjct: 554 TSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTN 613

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           LI+       ++LA     EM+ KGI  +V  Y ALI+G CR   +  A  L  +++E G
Sbjct: 614 LINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVG 673

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAV 718
           + PNK  Y+ +I+      N + AL L+K M++  I  D   ++ L+   L +   + A 
Sbjct: 674 LSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFAS 733

Query: 719 E-YLESLTLG 727
           E Y E L  G
Sbjct: 734 ELYAEMLAKG 743



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 130/400 (32%), Positives = 212/400 (53%), Gaps = 1/400 (0%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           LL  +  +  M E C  ++ KM+R G+ P V + N +I      G    A  V+  M E 
Sbjct: 439 LLSWLCKEGKMSEACS-IWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEK 497

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G+KP+++TY+ ++D + K+G+ + A  L   M+G   +P+  T N++I G  + G   ++
Sbjct: 498 GLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSES 557

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
           +  ++ +++ G   +  +YN II G+ ++G +  AL +  EM   GV+P + TY  LI G
Sbjct: 558 QDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLING 617

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
            CK   +  A     EM  K +  D+  Y  L+ G+CR G++  A  L  EL+   L P 
Sbjct: 618 FCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPN 677

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
            V Y+++I G  +  ++E A  L + MIN+GI  D+  YT +++G  K G L  A E + 
Sbjct: 678 KVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYA 737

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           EML KG+ PD   Y+  I G    G    A ++ E+M  K   P +  YN L+ G  K G
Sbjct: 738 EMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEG 797

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
           +L+EA  L  +M+  G +PD  TY  +++  ++ G+L  G
Sbjct: 798 NLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNLFSG 837


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  293 bits (749), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 168/481 (34%), Positives = 256/481 (53%), Gaps = 2/481 (0%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           AR++Y  M   GI+PS++T+NTM++  CK+G +QEA  ++  +      PN  TY  LI 
Sbjct: 186 ARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLIL 245

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G  RN  L+ A  +   M+K G   ++ +Y+ +I G   +G L EA+++ EEMV +G+ P
Sbjct: 246 GHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEP 305

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
           T+ TY I +  LC  G  S+A     +M ++  +P+I ++  L+ G  R G    A  L+
Sbjct: 306 TVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLY 365

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
            ++ +  LVPT VTYN LI+ LC  G  E A  + + M++ G LP   TY  ++   C M
Sbjct: 366 HKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLM 425

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G++  A   F++ML+ G  P+   Y T I G  K G+ + A RL E M   G  PD  TY
Sbjct: 426 GDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTY 485

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
             L+ G  + G LE A  L   M+  G  P+H+TYT+II     +  +     LF  M+ 
Sbjct: 486 TELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVE 545

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
            G  P+  TY V+I   +    +  A  +  +M  +G+ PNVITY + I+GLCR  R   
Sbjct: 546 SGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGL 605

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA--LRLYKEMLDREIEPDYCTHSAL 704
           A+ +F +ME+    PN YTY+ LI   C  G  ++A    L   +     EP+  T++ L
Sbjct: 606 AFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTL 665

Query: 705 L 705
           +
Sbjct: 666 V 666



 Score =  288 bits (737), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 200/699 (28%), Positives = 322/699 (46%), Gaps = 23/699 (3%)

Query: 32  FSVHTYPSISESNNKDSVLNPESESYYKELIISTVEEKPWAFCNNRWVSDHFQAVVS--- 88
           F++ + P  S      S  NP  E   K   IST+   P      +W        +S   
Sbjct: 26  FNLSSEPHPSSPLPISSTTNPFPELVSK---ISTILSSP------KWEHSSELCHLSPKL 76

Query: 89  DPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVE 148
            P  +V +L   +    + LRFF W+  +   K D   F ++L  L+   L   A  V  
Sbjct: 77  KPHHVVNILQTHKNTDSV-LRFFFWISRRKFFKHDMSCFVSMLNRLVRDRLFAPADHVRI 135

Query: 149 TVV--CVNMHGILDVL-----IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLR 201
            ++  C N   +  V      I        ++     LL+   K  MV+    ++ KML 
Sbjct: 136 LMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLN 195

Query: 202 NGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQE 261
           +G+ P +   N +I +L   G   +A+ +   +  +   P+  TY +++   C+   +  
Sbjct: 196 SGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDL 255

Query: 262 ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC 321
           A  +   M   GC PN VTY+ LI G    G LE+A  ++ +M++ G++ + ++Y   + 
Sbjct: 256 AFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLV 315

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
              + G   EA+ L  +M  RG  P + T+  LI GL + G+   A   + +ML   ++P
Sbjct: 316 SLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVP 375

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
             ++YN L+   C  G    AF +F  + S   +P+  TYN +I   C  GD++ A  + 
Sbjct: 376 TTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIF 435

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
           + M+  G  P+VITY  ++ G CK GNL+ A      M   GL+PD + YT  I+G  + 
Sbjct: 436 DKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRG 495

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
           G    A  L   M+  G  P+ +TY  ++ G   L  +++A  L  KMV  G +P   TY
Sbjct: 496 GKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTY 555

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
             +I    +   +    +    M+++GL P ++TYT  I      GR  LAF  F EM+ 
Sbjct: 556 NVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEK 615

Query: 622 KGIRPNVITYNALINGLCRLRRIDQA--YGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
           +   PN+ TY++LI GLC+  R + A  Y L   +   G  PN  TYT L+   C  G  
Sbjct: 616 RNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRC 675

Query: 680 QEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAV 718
            EA +L   M  + ++P    + ALL+ +  K+ KV + 
Sbjct: 676 YEADQLVVSMQKKGLQPSEEIYRALLIGEC-KNLKVESA 713



 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 169/550 (30%), Positives = 273/550 (49%), Gaps = 5/550 (0%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+L + +   ++    +F++M+++G  P+    + +I  L   G   +A ++   M + G
Sbjct: 243 LILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKG 302

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           I+P++ TY   L S C  G   EA+ELL +M+ RGC PN  T+  LI+G SR+G+ E A 
Sbjct: 303 IEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAI 362

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
           GL   ML  GL  +  +YN +I     +G    A  + + M++ G  P+  TYN +I   
Sbjct: 363 GLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCF 422

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C  G +  A   F +ML+    P++I+YNTL+YGYC+ GN+  A  L + ++   L P  
Sbjct: 423 CLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDA 482

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
            TY  LI G  R G LE A  L   M+  GI P+ +TYT +++G   +  +  A   F +
Sbjct: 483 WTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWK 542

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M+  G  P    Y   I+G  K    SEA     +M+ +G  P++ITY   + GLC+ G 
Sbjct: 543 MVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGR 602

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR--DLFNNMLRKGLSPTLVTY 596
              A ++  +M    + P+  TY+S+I+   + G        +L   +   G  P + TY
Sbjct: 603 TGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTY 662

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
           T L+      GR   A      MQ KG++P+   Y AL+ G C+  +++ A  +F  M+ 
Sbjct: 663 TTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDT 722

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL---LLKQLDKDY 713
            G   +   Y  LI   C     +EA  +++ ML++    D    + L   LLK+ + D 
Sbjct: 723 LGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDL 782

Query: 714 KVHAVEYLES 723
            +  +  +ES
Sbjct: 783 CLKLLHVMES 792



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 137/412 (33%), Positives = 213/412 (51%), Gaps = 2/412 (0%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           E    +F  ML +G LP  +  N IIK     G   KA  ++  M + G  P+++TYNT+
Sbjct: 394 ETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTL 453

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           +  +CK+G +  A+ LL  M+G G  P+  TY  LI+GFSR G+LE A  L   M++ G+
Sbjct: 454 IYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGI 513

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
             +  +Y  II GY     + +AL L  +MV  G  P+  TYN++I G  K   +S+A +
Sbjct: 514 SPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAEN 573

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
              +M+++ ++P++I+Y + + G CR+G  G AF +F E+  RN  P + TY++LI GLC
Sbjct: 574 FCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLC 633

Query: 430 RYGDLEVAQ--QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           + G  E A+   L   + + G  P+V TYT +V G C  G    A +    M +KGLQP 
Sbjct: 634 QEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPS 693

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              Y   + GE K      A  +   M   GF   L  Y  L+  LCK   +EEA  + +
Sbjct: 694 EEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQ 753

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
            M+   +  D + +T ++   L+ G+      L + M  +  +    TY +L
Sbjct: 754 TMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVML 805



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 137/481 (28%), Positives = 231/481 (48%), Gaps = 4/481 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
           +  KM + G +P+++    +I  L RD  F +     ++M+ + G+ P+ VTYN +++  
Sbjct: 329 LLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLAD-GLVPTTVTYNALINQL 387

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           C EG  + A  +   M   G  P+  TYN +I  F   G++++A  +   MLK G   + 
Sbjct: 388 CVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNV 447

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
            +YN +I GY ++G L  A+ L E M   G+ P   TY  LI G  + G++  A   F+ 
Sbjct: 448 ITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYG 507

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M+   + P+ ++Y  ++ GY     + +A  LF ++     +P+  TYN +I G  +   
Sbjct: 508 MMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNS 567

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           +  A+     M+ QG+LP+VITYT  ++G C+ G   +A + F+EM ++   P+ + Y++
Sbjct: 568 ISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSS 627

Query: 494 QIAGELKLG--DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
            I G  + G  + +E Y L   +   G  P++ TY  LV GLC  G   EA++L+  M  
Sbjct: 628 LIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQK 687

Query: 552 DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLEL 611
            G  P    Y +++    +   +    ++F +M   G    L  Y  LI A      +E 
Sbjct: 688 KGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEE 747

Query: 612 AFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
           A   F  M  K    + + +  L++GL +    D    L   ME      N  TY +L  
Sbjct: 748 AQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLAR 807

Query: 672 E 672
           E
Sbjct: 808 E 808



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 183/417 (43%), Gaps = 11/417 (2%)

Query: 129 TILEILIESGLLRSAYWVVETVVCVNMHG-------ILDVLIGGGLSSCVSIKILDLLLL 181
           TI + ++  G L S     E + C  + G       I D ++  G S   ++   + L+ 
Sbjct: 398 TIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSP--NVITYNTLIY 455

Query: 182 IYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKP 241
            Y K+  +   + +   M  NGL PD      +I      G    A  ++  M E GI P
Sbjct: 456 GYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISP 515

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
           + VTY  ++D +    ++ +AL L W+M   G  P+  TYNV+I+GFS+   + +A    
Sbjct: 516 NHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFC 575

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
             M+K GL  +  +Y   I G    G    A  +  EM  R   P L TY+ LIYGLC+ 
Sbjct: 576 GKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQE 635

Query: 362 GRVSDAR--HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
           GR  DA   +    +      P++ +Y TL+ G C  G   EA  L   ++ + L P+  
Sbjct: 636 GRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEE 695

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
            Y  L+ G C+   +E A  +  +M   G    +  Y  ++   CK   +  A+  F  M
Sbjct: 696 IYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTM 755

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           L K    D   +T  + G LK G+T    +L   M ++    +  TY +L   L  L
Sbjct: 756 LEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLARELSAL 812



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 126/275 (45%), Gaps = 6/275 (2%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           S +  ++++  ++K + + +      KM++ GLLP+V      I  L  NG +  A +++
Sbjct: 551 SSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIF 610

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA--LELLWEMQGRGCSPNGVTYNVLITGFS 289
             M +    P++ TY++++   C+EG  ++A    LL  +   GC PN  TY  L+ G  
Sbjct: 611 HEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLC 670

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
             G   +A  L+  M K GL+ S   Y  ++ G  +   +  ALN+   M T G    L+
Sbjct: 671 GEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLS 730

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
            Y  LI  LCK   + +A+  F  ML K+   D + +  LL G  + G       L   +
Sbjct: 731 DYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVM 790

Query: 410 RSRNLVPTVVTYNTLIDGL----CRYGDLEVAQQL 440
            SRN      TY  L   L    C     +++QQL
Sbjct: 791 ESRNCTLNFQTYVMLARELSALDCAIKIPQISQQL 825



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 39/216 (18%)

Query: 544 ELLRKMVGDG-FIP-DHITYTSIIHASLEMGDLRRGRDLFNNMLRK-GLSPTLVTYTVLI 600
            +L ++V D  F P DH+    +I +    G+++R     + +  K     TL ++T L+
Sbjct: 116 SMLNRLVRDRLFAPADHVRIL-MIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLL 174

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN------------------------ 636
                   ++LA   + +M   GIRP+++T+N +IN                        
Sbjct: 175 IQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAY 234

Query: 637 -----------GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
                      G CR   +D A+ +F  M ++G  PN  TY+ LIN  C+ G  +EA+ +
Sbjct: 235 PNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDM 294

Query: 686 YKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYL 721
            +EM+ + IEP   T++  L+   D      AVE L
Sbjct: 295 LEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELL 330


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  292 bits (748), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 163/517 (31%), Positives = 269/517 (52%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           ++  L  F +MLR    P V    R +  +           +   M  FG+  ++ + N 
Sbjct: 73  IDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNI 132

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++  C+   +  A+ +L +M   G  P+ +T+N LI G    GE+++A GL  +M++ G
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            +    SY+ +I G  + G    AL L  +M  +G  P L  Y  +I  LCK   V+DA 
Sbjct: 193 HQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAM 252

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               EM+ + + PD+++Y+T+L+G+C  G++ EA +LF+E+  RN++P  VT+  L+DGL
Sbjct: 253 DLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGL 312

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G +  A+ + E M  +G  P+  TY  +++G C    +  A++  + M+ KG  P  
Sbjct: 313 CKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVV 372

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
            +Y   I G  K     EA  L  EM  K   PD +TY+ L+ GLC++G  +EA  L ++
Sbjct: 373 HSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKE 432

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M   G +PD +TY++++    + G L     L  +M    + P +V Y +LI      G+
Sbjct: 433 MCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGK 492

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           LE+A   FS++   GI+P + TY  +I GL +    D+AY LF  ME++G LPN  +Y +
Sbjct: 493 LEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNV 552

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +I       +   A+RL  EM+ +    D  T   LL
Sbjct: 553 IIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLL 589



 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 158/488 (32%), Positives = 264/488 (54%)

Query: 184 TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
            KK      + + N+M   G+  +V + N +I  L      V A  V   M + GI+P  
Sbjct: 103 AKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDA 162

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           +T+NT+++  C EGE++EA+ L  EM  RG  P+ ++Y+ +I G  ++G    A  L+R 
Sbjct: 163 ITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRK 222

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M + G K +  +Y  II    +  L+ +A++L  EMV RG+ P + TY+ +++G C  G 
Sbjct: 223 MEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGH 282

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           +++A   F EM+ +NV+P+ +++  L+ G C+ G + EA  +F+ +  +   P   TYN 
Sbjct: 283 LNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNA 342

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           L+DG C    ++ AQ++ + M+++G  P V +Y I++NG CK   L  A+    EM  K 
Sbjct: 343 LMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKE 402

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           L PD   Y+T + G  ++G   EA  L +EM + G  PDL+TY+ L+ GLCK G L+EA 
Sbjct: 403 LTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEAL 462

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
           +LL+ M      PD + Y  +I      G L   ++LF+ +   G+ PT+ TYT++I   
Sbjct: 463 KLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGL 522

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
              G  + A+  F +M+  G  PN  +YN +I G  + +    A  L  +M  +    + 
Sbjct: 523 LKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADS 582

Query: 664 YTYTILIN 671
            T+ +L++
Sbjct: 583 STFQMLLD 590



 Score =  265 bits (678), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 156/509 (30%), Positives = 261/509 (51%), Gaps = 3/509 (0%)

Query: 218 LRDNGFSVKAR--EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCS 275
           L +N  S+       YRM+     +PS+V +   L S  K+ +    + L  +M   G +
Sbjct: 66  LSNNSISIDDALASFYRML-RMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVT 124

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
            N  + N+LI    R   +  A  ++  M KLG++  A ++N +I G   +G + EA+ L
Sbjct: 125 HNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGL 184

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
             EMV RG  P + +Y+ +I GLCK G  S A     +M  K   P++++Y T++   C+
Sbjct: 185 FNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCK 244

Query: 396 SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
              + +A  L  E+  R + P VVTY+T++ G C  G L  A  L   M+ + ++P+ +T
Sbjct: 245 DTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVT 304

Query: 456 YTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML 515
           +TI+V+G CK G +S AR  F  M +KG +P+ + Y   + G        EA ++ + M+
Sbjct: 305 FTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMV 364

Query: 516 AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLR 575
            KG  P + +YN+L++G CK   L+EA  LL +M      PD +TY++++    ++G  +
Sbjct: 365 DKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQ 424

Query: 576 RGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALI 635
              +LF  M   GL P L+TY+ L+      G L+ A      MQ   I P+++ YN LI
Sbjct: 425 EALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILI 484

Query: 636 NGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIE 695
            G+    +++ A  LF  +  +GI P   TYTI+I      G   EA  L+++M D    
Sbjct: 485 EGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFL 544

Query: 696 PDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           P+ C+++ ++   L       A+  ++ +
Sbjct: 545 PNSCSYNVIIQGFLQNQDSSTAIRLIDEM 573


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  292 bits (748), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 159/494 (32%), Positives = 263/494 (53%), Gaps = 12/494 (2%)

Query: 240 KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
           KP+++ + T+++  C+EG + EA+ LL  M   G  PN +TY  ++ G  + G+   A  
Sbjct: 174 KPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALN 233

Query: 300 LIRDMLKLG-LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
           L+R M ++  +K +   Y+ II G  + G   +A NL  EM  +G++P L TYN +I G 
Sbjct: 234 LLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGF 293

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C  GR S+A+    EM  + + PD+++++ L+    + G   EA  L++E+  R ++P  
Sbjct: 294 CSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNT 353

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           +TYN++IDG  +   L+ A+++   M  +G  PDVIT++I+++G C    +    +  +E
Sbjct: 354 ITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHE 413

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M R+GL  +   YTT I G  +LG+ + A  L +EM++ G  P+++T N L+ GLC  G 
Sbjct: 414 MSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGK 473

Query: 539 LEEANELLRKMVG-----------DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
           L++A E+ + M             +   PD  TY  +I   +  G      +L+  M  +
Sbjct: 474 LKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHR 533

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
           GL P  +TY  +I     + RL+ A   F  M  KG  P+V+T+  LING C++ R+   
Sbjct: 534 GLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDG 593

Query: 648 YGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLK 707
             +F +M   GI+ N  TY  LI+  C  GN   AL +++EM+   + PD  T   +L  
Sbjct: 594 LEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTG 653

Query: 708 QLDKDYKVHAVEYL 721
              K+    AV+ L
Sbjct: 654 LWSKEELKRAVQCL 667



 Score =  278 bits (712), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 155/466 (33%), Positives = 244/466 (52%), Gaps = 12/466 (2%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG-IKPSI 243
           ++  V + + + ++M+ +GL P+      I+  +   G +V A  + R M E   IKP++
Sbjct: 189 REGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNV 248

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           V Y+ ++D   K+G   +A  L  EMQ +G SPN  TYN +I GF  +G   +A+ L+R+
Sbjct: 249 VIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLRE 308

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M +  +     +++ +I    ++G   EA  L  EM+ RG+ P   TYN +I G  K  R
Sbjct: 309 MFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNR 368

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           +  A   F+ M  K   PD+I+++ L+ GYC +  + +   L  E+  R LV   +TY T
Sbjct: 369 LDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTT 428

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           LI G C+ G+L  A  L + MI+ G+ P+V+T   +++G C  G L  A E F  M +  
Sbjct: 429 LIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSK 488

Query: 484 L-----------QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
           +           +PD   Y   I G +  G  SEA  L EEM  +G  PD ITYN ++ G
Sbjct: 489 MDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDG 548

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           LCK   L+EA ++   M   GF PD +T+T++I+   ++G +  G ++F  M R+G+   
Sbjct: 549 LCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVAN 608

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
            +TY  LIH     G +  A   F EM   G+ P+ IT   ++ GL
Sbjct: 609 AITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 654



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 142/437 (32%), Positives = 227/437 (51%), Gaps = 16/437 (3%)

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
           L R M    +  + +S+  +I  +     L  AL+   ++   G  P+L T++ L++GLC
Sbjct: 98  LHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLC 157

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
              RVS+A H F ++ +    P++I++ TL+ G CR G + EA  L D +    L P  +
Sbjct: 158 VEDRVSEALHFFHQICK----PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQI 213

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQG-ILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           TY T++DG+C+ GD   A  L   M     I P+V+ Y+ +++G  K G  + A+  F+E
Sbjct: 214 TYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSE 273

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M  KG+ P+ F Y   I G    G  SEA RL  EM  +   PD++T++VL++ L K G 
Sbjct: 274 MQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGK 333

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
             EA EL  +M+  G IP+ ITY S+I    +   L     +F  M  KG SP ++T+++
Sbjct: 334 FFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSI 393

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           LI  +    R++       EM  +G+  N ITY  LI+G C+L  ++ A  L  +M   G
Sbjct: 394 LIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSG 453

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEM------LD-----REIEPDYCTHSALLLK 707
           + PN  T   L++  CN G  ++AL ++K M      LD      ++EPD  T++ L+  
Sbjct: 454 VCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICG 513

Query: 708 QLDKDYKVHAVEYLESL 724
            +++     A E  E +
Sbjct: 514 LINEGKFSEAEELYEEM 530



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 122/363 (33%), Positives = 201/363 (55%), Gaps = 11/363 (3%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +  +M    + PDV   + +I  L   G   +A E+Y  M   GI P+ +TYN+M+D F 
Sbjct: 305 LLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFS 364

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K+  +  A  + + M  +GCSP+ +T+++LI G+     ++    L+ +M + GL  +  
Sbjct: 365 KQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTI 424

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +Y  +I G+ + G L  AL+L +EM++ GV P + T N L+ GLC  G++ DA   F  M
Sbjct: 425 TYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVM 484

Query: 375 LRK-----------NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
            +            +V PD+ +YN L+ G    G   EA  L++E+  R LVP  +TYN+
Sbjct: 485 QKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNS 544

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           +IDGLC+   L+ A Q+ ++M ++G  PDV+T+T ++NG CK+G +    E F EM R+G
Sbjct: 545 VIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRG 604

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           +  +   Y T I G  ++G+ + A  + +EM++ G  PD IT   ++ GL     L+ A 
Sbjct: 605 IVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAV 664

Query: 544 ELL 546
           + L
Sbjct: 665 QCL 667



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 122/374 (32%), Positives = 198/374 (52%), Gaps = 5/374 (1%)

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
           ++L  +M  R +   + ++ ILI   C   ++  A   F ++ +    P +++++TLL+G
Sbjct: 96  ISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHG 155

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
            C    + EA   F ++      P V+ + TL++GLCR G +  A  L + M+  G+ P+
Sbjct: 156 LCVEDRVSEALHFFHQI----CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPN 211

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKG-LQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
            ITY  +V+G CKMG+   A     +M     ++P+   Y+  I G  K G  ++A  L 
Sbjct: 212 QITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLF 271

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
            EM  KG  P+L TYN +++G C  G   EA  LLR+M      PD +T++ +I+A ++ 
Sbjct: 272 SEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKE 331

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
           G      +L+N ML +G+ P  +TY  +I   + + RL+ A   F  M  KG  P+VIT+
Sbjct: 332 GKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITF 391

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           + LI+G C  +R+D    L  +M   G++ N  TYT LI+  C  GN   AL L +EM+ 
Sbjct: 392 SILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMIS 451

Query: 692 REIEPDYCTHSALL 705
             + P+  T + LL
Sbjct: 452 SGVCPNVVTCNTLL 465



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/220 (22%), Positives = 82/220 (37%), Gaps = 70/220 (31%)

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV------------------ 594
           GF  + +   S  H   E+  L    DLF  M+R    P ++                  
Sbjct: 39  GFGGERLKLQSGFH---EIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVV 95

Query: 595 -----------------TYTVLIHAHAARGRLELAFMYFSEMQVKGI------------- 624
                            ++T+LI    +  +L  A   F ++   G              
Sbjct: 96  ISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHG 155

Query: 625 ------------------RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
                             +PNVI +  L+NGLCR  R+ +A  L   M E+G+ PN+ TY
Sbjct: 156 LCVEDRVSEALHFFHQICKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITY 215

Query: 667 TILINENCNAGNWQEALRLYKEMLD-REIEPDYCTHSALL 705
             +++  C  G+   AL L ++M +   I+P+   +SA++
Sbjct: 216 GTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAII 255


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  292 bits (748), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 159/517 (30%), Positives = 269/517 (52%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           ++  L  F +M+R    P V    + +  +        A  +   M  FG+  ++ + N 
Sbjct: 77  IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNV 136

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++  C+   +  A+ ++ +M   G  P+ +T+N LI G    G++++A GL  +M+  G
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            + +  SYN +I G  + G  + A+ +  +M      P + TYN +I  LCK   V++A 
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAV 256

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               EM+ + + PD+++YNT+L+G+C  G + EA  LF E+  RN++P  VT+N L+DGL
Sbjct: 257 EFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGL 316

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G +  A+ + E M  +G  P+  TY  +++G C    +  A +    M+ KG  P+ 
Sbjct: 317 CKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNL 376

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
            +Y   I G  K    +EA RL  EM  K   PD +TY+ L+ GLC++G   EA  L ++
Sbjct: 377 SSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKE 436

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M   G +PD + Y+ ++    + G L     L   M  + + P ++ YT+LI      G+
Sbjct: 437 MCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGK 496

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           LE+A   FS++   GIRP++ TYN +I GL +    D+AY  F  ME++G LP+  +Y +
Sbjct: 497 LEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNV 556

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +I       +   A++L  EM+ +    D  T   LL
Sbjct: 557 IIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLL 593



 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 154/494 (31%), Positives = 257/494 (52%), Gaps = 1/494 (0%)

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
           YRM+     +PS+V +   L S  K+ +   A+ L  +M   G + N  + NVLI    R
Sbjct: 85  YRMV-RMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCR 143

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
              ++ A  ++  M KLG++  A ++N +I G   +G + EA+ L  EMV  G  P + +
Sbjct: 144 LSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVIS 203

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           YN +I GLCK G    A   F +M +    P++++YNT++   C+   + EA     E+ 
Sbjct: 204 YNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMV 263

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
            R + P VVTYNT++ G C  G L  A +L + M+ + ++PD +T+ I+V+G CK G +S
Sbjct: 264 DRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVS 323

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            AR     M  KG +P+ + Y   + G        EA ++   M+ KG  P+L +YN+L+
Sbjct: 324 EARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILI 383

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
           +G CK   + EA  LL +M      PD +TY++++    ++G  R   +LF  M   GL 
Sbjct: 384 NGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLL 443

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           P L+ Y++L+      G L+ A     EM  + I+PN+I Y  LI G+    +++ A  L
Sbjct: 444 PDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKEL 503

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLD 710
           F  +  +GI P+ +TY ++I      G   EA   +++M D    PD C+++ ++   L 
Sbjct: 504 FSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQ 563

Query: 711 KDYKVHAVEYLESL 724
                 A++ ++ +
Sbjct: 564 NQDSSTAIQLIDEM 577



 Score =  275 bits (702), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 154/488 (31%), Positives = 261/488 (53%)

Query: 184 TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
            KK      + + N+M   G+  +V + N +I  L        A  V   M + GI+P  
Sbjct: 107 AKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDA 166

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           +T+NT+++  C EG+++EA+ L  EM   G  PN ++YN +I G  +NG    A  + R 
Sbjct: 167 ITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRK 226

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M +   K +  +YN II    +  L+ EA+    EMV RG+ P + TYN +++G C  G+
Sbjct: 227 MEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQ 286

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           +++A   F EM+ +NV+PD +++N L+ G C+ G + EA  + + +  +   P   TYN 
Sbjct: 287 LNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNA 346

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           L+DG C +  ++ A ++   MI +G  P++ +Y I++NG CK   ++ A+   +EM  K 
Sbjct: 347 LMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKN 406

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           L PD   Y+T + G  ++G   EA  L +EM + G  PDL+ Y++L+ G CK G L+EA 
Sbjct: 407 LTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEAL 466

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
           +LL++M      P+ I YT +I      G L   ++LF+ +   G+ P + TY V+I   
Sbjct: 467 KLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGL 526

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
              G  + A+ +F +M+  G  P+  +YN +I G  + +    A  L  +M  +    + 
Sbjct: 527 LKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADS 586

Query: 664 YTYTILIN 671
            T+ +L++
Sbjct: 587 STFQMLLD 594



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 151/460 (32%), Positives = 233/460 (50%), Gaps = 35/460 (7%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
           L++L+    + S V+  + V  KM + G+ PD    N +I  L + G   +A  ++  M 
Sbjct: 134 LNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMV 193

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
             G +P++++YNT+++  CK G    A+ +  +M+     PN VTYN +I    ++  + 
Sbjct: 194 WSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVN 253

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
           +A   + +M+  G+     +YN I+ G+   G L EA  L +EMV R V P   T+NIL+
Sbjct: 254 EAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILV 313

Query: 356 YGLCKWGRVSDAR---------------------------HRFFE--------MLRKNVI 380
            GLCK G VS+AR                           H   +        M+ K   
Sbjct: 314 DGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCA 373

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           P++ SYN L+ GYC+S  + EA  L  E+  +NL P  VTY+TL+ GLC+ G    A  L
Sbjct: 374 PNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNL 433

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
            + M + G+LPD++ Y+I+++G CK G+L  A +   EM  + ++P+   YT  I G   
Sbjct: 434 FKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFI 493

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
            G    A  L  ++ A G  PD+ TYNV++ GL K G  +EA E  RKM  DGF+PD  +
Sbjct: 494 AGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCS 553

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           Y  II   L+  D      L + M+ K  S    T+ +L+
Sbjct: 554 YNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLL 593



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 155/343 (45%), Gaps = 35/343 (10%)

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
           +I +A   F  +   N  P+VV +   +  + +      A  L   M   G+  +V +  
Sbjct: 76  SIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLN 135

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
           +++N  C++ ++  A     +M + G+QPD   + T I G    G   EA  L  EM+  
Sbjct: 136 VLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWS 195

Query: 518 GFPPDLITYNVLVHGLCKLGS-----------------------------------LEEA 542
           G  P++I+YN +++GLCK G+                                   + EA
Sbjct: 196 GHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEA 255

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            E L +MV  G  PD +TY +I+H    +G L     LF  M+ + + P  VT+ +L+  
Sbjct: 256 VEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDG 315

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
               G +  A      M  KG  PN  TYNAL++G C   ++D+A  +   M  +G  PN
Sbjct: 316 LCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPN 375

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             +Y ILIN  C +    EA RL  EM ++ + PD  T+S L+
Sbjct: 376 LSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLM 418



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 115/233 (49%), Gaps = 2/233 (0%)

Query: 158 ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
           +L ++IG G +   ++   ++L+  Y K   + +   + ++M    L PD    + +++ 
Sbjct: 363 VLGIMIGKGCAP--NLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQG 420

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
           L   G   +A  +++ M   G+ P ++ Y+ +LD FCK G + EAL+LL EM  R   PN
Sbjct: 421 LCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPN 480

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
            + Y +LI G    G+LE A+ L   +   G++    +YN +I G  ++GL  EA     
Sbjct: 481 IILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFR 540

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
           +M   G  P   +YN++I G  +    S A     EM+ K    D  ++  LL
Sbjct: 541 KMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLL 593


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  292 bits (747), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 161/503 (32%), Positives = 269/503 (53%), Gaps = 1/503 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F++MLR  + PDV   N ++  L   G  +++  +   + + G+  +  T N  +   C
Sbjct: 102 LFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLC 161

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           + G ++EA+ L+  M     +P+ VTYN L+ G  ++ ++++A   +R M+  G      
Sbjct: 162 EGGRLEEAVALVESMDAY-IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDF 220

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +YN II GY ++ +L EA  L ++ + +G  P   TY  LI GLC  G V  A   F E 
Sbjct: 221 TYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEA 280

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
             K++ PD++ YN+L+ G CR G I  A  + +E+      P + TYN +I+GLC+ G++
Sbjct: 281 QAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNI 340

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
             A  +  + I +G LPDV T+  M++G CK   L  A +    M   G+ PD   Y + 
Sbjct: 341 SDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSV 400

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           + G  K G   E     EEM+ KG  P+ ITYN+L+   CK+  LEEA+ ++ +M  DG 
Sbjct: 401 LNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGL 460

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
           +PD I++ ++IH     GDL     LF  +  KG S T  T+ +LI A++++  +++A  
Sbjct: 461 VPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEK 520

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F EM  KG +P++ TY  L++G C+   +D+AY    +M  +G +P+  T+  ++N   
Sbjct: 521 IFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLA 580

Query: 675 NAGNWQEALRLYKEMLDREIEPD 697
                 EA+ +   M+   + P+
Sbjct: 581 MNHRVSEAVAIIHIMVRMGVVPE 603



 Score =  279 bits (713), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 147/490 (30%), Positives = 261/490 (53%), Gaps = 1/490 (0%)

Query: 203 GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           G  P     N I+  L +  +  +A +VY  M   G+ P   T+   + SFC  G    A
Sbjct: 5   GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
           L LL  +  RGC    + Y  ++ G   +G    AR L  +ML+  +     ++N ++  
Sbjct: 65  LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHA 124

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
             +KG ++E+  L  +++ RG++    T NI I GLC+ GR+ +A     E +   + PD
Sbjct: 125 LCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAV-ALVESMDAYIAPD 183

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
           +++YNTL+ G C+   + EA      + ++  +P   TYNT+IDG C+   L+ A +L +
Sbjct: 184 VVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLK 243

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
           + I +G +PD +TY  ++NG C  G++  A E FNE   K L+PD   Y + + G  + G
Sbjct: 244 DAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQG 303

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
               A ++  EM+  G  PD+ TYN++++GLCK+G++ +A  ++   +  G++PD  T+ 
Sbjct: 304 LILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFN 363

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
           ++I    +   L     L   M   G++P  +TY  +++     G+ +     F EM +K
Sbjct: 364 TMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILK 423

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
           G RPN ITYN LI   C++ ++++A G+ + M ++G++P+  ++  LI+  C  G+   A
Sbjct: 424 GCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGA 483

Query: 683 LRLYKEMLDR 692
             L++++ ++
Sbjct: 484 YLLFQKLDEK 493



 Score =  278 bits (711), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 157/492 (31%), Positives = 250/492 (50%), Gaps = 1/492 (0%)

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
           +++ L  +G    AR ++  M    + P + T+N +L + C++G++ E+  LL ++  RG
Sbjct: 86  VVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRG 145

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
            S N  T N+ I G    G LE+A  L+  M    +     +YN ++ G  +   + EA 
Sbjct: 146 MSVNKFTCNIWIRGLCEGGRLEEAVALVESM-DAYIAPDVVTYNTLMRGLCKDSKVQEAA 204

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
                M+ +G  P   TYN +I G CK   + +A     + + K  +PD ++Y +L+ G 
Sbjct: 205 QYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGL 264

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
           C  G++  A  LF+E ++++L P +V YN+L+ GLCR G +  A Q+   M+  G  PD+
Sbjct: 265 CAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDI 324

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
            TY I++NG CKMGN+S A    N+ + KG  PD F + T I G  K      A +L E 
Sbjct: 325 WTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVER 384

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           M   G  PD ITYN +++GLCK G  +E NE   +M+  G  P+ ITY  +I    ++  
Sbjct: 385 MWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQ 444

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
           L     +   M + GL P  +++  LIH     G L+ A++ F ++  KG      T+N 
Sbjct: 445 LEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNI 504

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
           LI        +  A  +F +M  +G  P+ YTY +L++ +C A N   A     EM+ + 
Sbjct: 505 LIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKG 564

Query: 694 IEPDYCTHSALL 705
             P   T   +L
Sbjct: 565 FVPSMATFGRVL 576



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 148/472 (31%), Positives = 239/472 (50%), Gaps = 1/472 (0%)

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M  FG  P+   YN ++D+        +A ++   M   G +P+  T+ V I  F   G 
Sbjct: 1   MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGR 60

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
              A  L+R + + G  V   +Y  ++ G    G   +A +L +EM+ R V P +AT+N 
Sbjct: 61  PHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNN 120

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           +++ LC+ G + ++     ++L++ +  +  + N  + G C  G + EA  L + + +  
Sbjct: 121 VLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY- 179

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           + P VVTYNTL+ GLC+   ++ A Q    M+NQG +PD  TY  +++G CK   L  A 
Sbjct: 180 IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEAT 239

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
           E   + + KG  PDR  Y + I G    GD   A  L  E  AK   PDL+ YN LV GL
Sbjct: 240 ELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGL 299

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
           C+ G +  A +++ +MV DG  PD  TY  +I+   +MG++     + N+ + KG  P +
Sbjct: 300 CRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDV 359

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
            T+  +I  +  R +L+ A      M + GI P+ ITYN+++NGLC+  +  +    F +
Sbjct: 360 FTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEE 419

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           M  +G  PN  TY ILI   C     +EA  +   M    + PD  + + L+
Sbjct: 420 MILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLI 471



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 134/427 (31%), Positives = 224/427 (52%), Gaps = 2/427 (0%)

Query: 204 LLPDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           + PDV   N +++ L +D+     A+ + RMM + G  P   TYNT++D +CK   +QEA
Sbjct: 180 IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQ-GCIPDDFTYNTIIDGYCKRDMLQEA 238

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
            ELL +   +G  P+ VTY  LI G    G++E+A  L  +     LK     YN ++ G
Sbjct: 239 TELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKG 298

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
              +GL++ AL +  EMV  G  P + TYNI+I GLCK G +SDA     + + K  +PD
Sbjct: 299 LCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPD 358

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
           + ++NT++ GYC+   +  A  L + +    + P  +TYN++++GLC+ G  +   +  E
Sbjct: 359 VFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFE 418

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            MI +G  P+ ITY I++   CK+  L  A      M + GL PD  ++ T I G  + G
Sbjct: 419 EMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNG 478

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
           D   AY L +++  KG+     T+N+L+       +++ A ++  +M+  G+ PD  TY 
Sbjct: 479 DLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYR 538

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
            ++  S +  ++ R       M+ KG  P++ T+  ++++ A   R+  A      M   
Sbjct: 539 VLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRM 598

Query: 623 GIRPNVI 629
           G+ P V+
Sbjct: 599 GVVPEVV 605



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 114/375 (30%), Positives = 192/375 (51%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K+ M+++   +    +  G +PD      +I  L   G   +A E++       +KP 
Sbjct: 229 YCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPD 288

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +V YN+++   C++G +  AL+++ EM   GC P+  TYN++I G  + G +  A  ++ 
Sbjct: 289 LVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMN 348

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           D +  G      ++N +I GY ++  L  AL L E M   G+AP   TYN ++ GLCK G
Sbjct: 349 DAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAG 408

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           +  +    F EM+ K   P+ I+YN L+  +C+   + EA  +   +    LVP  +++N
Sbjct: 409 KAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFN 468

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           TLI G CR GDL+ A  L + +  +G      T+ I++       N+ MA + F EM+ K
Sbjct: 469 TLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISK 528

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G +PD + Y   + G  K  +   AY    EM++KGF P + T+  +++ L     + EA
Sbjct: 529 GYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEA 588

Query: 543 NELLRKMVGDGFIPD 557
             ++  MV  G +P+
Sbjct: 589 VAIIHIMVRMGVVPE 603



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 147/309 (47%), Gaps = 1/309 (0%)

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P    YN ++D L      + A ++   M++ G+ PD  T+T+ +   C  G   +A   
Sbjct: 8   PAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRL 67

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
              +  +G      AY T + G    G   +A  L +EML +   PD+ T+N ++H LC+
Sbjct: 68  LRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQ 127

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
            G + E+  LL K++  G   +  T    I    E G L     L  +M    ++P +VT
Sbjct: 128 KGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM-DAYIAPDVVT 186

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           Y  L+       +++ A  Y   M  +G  P+  TYN +I+G C+   + +A  L  D  
Sbjct: 187 YNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAI 246

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKV 715
            +G +P++ TY  LIN  C  G+ + AL L+ E   ++++PD   +++L+     +   +
Sbjct: 247 FKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLIL 306

Query: 716 HAVEYLESL 724
           HA++ +  +
Sbjct: 307 HALQVMNEM 315



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/252 (22%), Positives = 114/252 (45%), Gaps = 40/252 (15%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           ++L+  + K + +E+   V  +M ++GL+PD                             
Sbjct: 433 NILIENFCKINQLEEASGVIVRMSQDGLVPDT---------------------------- 464

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
                  +++NT++  FC+ G++  A  L  ++  +G S    T+N+LI  +S    ++ 
Sbjct: 465 -------ISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQM 517

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  +  +M+  G K   ++Y  ++ G  +   +  A     EMV++G  P++AT+  ++ 
Sbjct: 518 AEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLN 577

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
            L    RVS+A      M+R  V+P+++  +T+L        I    +L +EL  +  + 
Sbjct: 578 SLAMNHRVSEAVAIIHIMVRMGVVPEVV--DTIL--STDKKEIAAPKILVEELMKKGHI- 632

Query: 417 TVVTYNTLIDGL 428
           +  TY  L +G+
Sbjct: 633 SYPTYEVLHEGV 644


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  292 bits (747), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 156/477 (32%), Positives = 261/477 (54%), Gaps = 1/477 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F++ML   + PDV   N ++  L   G  +++  +   + + G+  +  T N  +   C
Sbjct: 198 LFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLC 257

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           ++G ++EA+ L+  M G   +P+ VTYN L+ G  ++ ++++A   +  M+  G      
Sbjct: 258 EDGRLEEAVALVERM-GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDF 316

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +YN II GY + G+L EA  L ++ V +G  P   TY  LI GLC  G +  A   F E 
Sbjct: 317 TYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEA 376

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
             K++ PD++ YN+L+ G CR G I  A  + +E+      P + TYN +I+GLC+ G++
Sbjct: 377 QAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNI 436

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
             A  +  + I +G LPDV T+  +++G CK   L  A +    M   G+ PD   Y + 
Sbjct: 437 SDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSV 496

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           + G  K G   E     EEM+ KG  P+ ITYN+L+   CK+  LEEA+ ++ +M  DG 
Sbjct: 497 LNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGL 556

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
           +PD +++ ++IH     GDL     LF  +  KG S T  T+ +LI A++++  +++A  
Sbjct: 557 VPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEK 616

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
            F EM  KG +P++ TY  L++GLC+   +D+AY    +M  +G +P+  T+  ++N
Sbjct: 617 IFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLN 673



 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 162/494 (32%), Positives = 256/494 (51%), Gaps = 5/494 (1%)

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
           +++ L  +G    AR ++  M    + P + T+N +L + C++G++ E+  LL ++  RG
Sbjct: 182 VVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRG 241

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH--SYNPIICGYSEKGLLVE 331
            S N  T N+ I G   +G LE+A  L+    ++G  V+    +YN ++ G  +   + E
Sbjct: 242 MSANKFTCNIWIRGLCEDGRLEEAVALVE---RMGAYVAPDVVTYNTLMRGLCKDSKVQE 298

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
           A      M+ +G  P   TYN +I G CK G + +A     + + K  +PD ++Y +L+ 
Sbjct: 299 AAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLIN 358

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
           G C  G+I  A  LF+E ++++L P +V YN+L+ GLCR G +  A Q+   M+ +G  P
Sbjct: 359 GLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHP 418

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           D+ TY I++NG CKMGN+S A    N+ + KG  PD F + T I G  K      A +L 
Sbjct: 419 DIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLV 478

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
           E M   G  PD+ITYN +++GLCK G  +E NE   +M+  G  P+ ITY  +I    ++
Sbjct: 479 ERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKI 538

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
             L     +   M + GL P  V++  LIH     G L+ A++ F ++  KG      T+
Sbjct: 539 NQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTF 598

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           N LI        +  A  +F +M  +G  P+ YTY IL++  C A N   A     EM+ 
Sbjct: 599 NILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMIS 658

Query: 692 REIEPDYCTHSALL 705
           +   P   T   +L
Sbjct: 659 KGFVPSMATFGRML 672



 Score =  282 bits (722), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 151/510 (29%), Positives = 268/510 (52%), Gaps = 1/510 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y +   +   +  F +M      P     N I+  L +  +  +A +VY  M   G+ P 
Sbjct: 81  YARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPD 140

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             T+   L SFC  G    AL LL  +  RGC      Y  ++ G   +G    AR L  
Sbjct: 141 ARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFD 200

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +ML   +     ++N ++    +KG ++E+  L  +++ RG++    T NI I GLC+ G
Sbjct: 201 EMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDG 260

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R+ +A     E +   V PD+++YNTL+ G C+   + EA      + ++  +P   TYN
Sbjct: 261 RLEEAV-ALVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYN 319

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           T+IDG C+ G L+ A +L ++ + +G +PD +TY  ++NG C  G++  A E FNE   K
Sbjct: 320 TIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAK 379

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
            L+PD   Y + + G  + G    A ++  EM+ +G  PD+ TYN++++GLCK+G++ +A
Sbjct: 380 DLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDA 439

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             ++   +  G++PD  T+ ++I    +   L     L   M   G++P ++TY  +++ 
Sbjct: 440 AVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNG 499

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
               G+ +     F EM +KG RPN ITYN LI   C++ ++++A G+ + M ++G++P+
Sbjct: 500 LCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPD 559

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDR 692
             ++  LI+  C  G+   A  L++++ ++
Sbjct: 560 AVSFNTLIHGFCRNGDLDGAYLLFQKLDEK 589



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 148/494 (29%), Positives = 230/494 (46%), Gaps = 34/494 (6%)

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           Y   + ++ + G ++ A++    M    C P    YN ++         +QA  +   ML
Sbjct: 74  YVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRML 133

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
             G+   A ++   +  +   G    AL L   +  RG     A Y  ++ GL   G   
Sbjct: 134 AAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGY 193

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL----------- 414
           +ARH F EML ++V PD+ ++N +L+  C+ G++ E+  L  ++  R +           
Sbjct: 194 NARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWI 253

Query: 415 -----------------------VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
                                   P VVTYNTL+ GLC+   ++ A Q    M+NQG +P
Sbjct: 254 RGLCEDGRLEEAVALVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIP 313

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           D  TY  +++G CK G L  A E   + + KG  PDR  Y + I G    GD   A  L 
Sbjct: 314 DDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELF 373

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
            E  AK   PDL+ YN LV GLC+ G +  A +++ +MV +G  PD  TY  II+   +M
Sbjct: 374 NEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKM 433

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
           G++     + N+ + KG  P + T+  LI  +  R +L+ A      M   GI P+VITY
Sbjct: 434 GNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITY 493

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           N+++NGLC+  +  +    F +M  +G  PN  TY ILI   C     +EA  +   M  
Sbjct: 494 NSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQ 553

Query: 692 REIEPDYCTHSALL 705
             + PD  + + L+
Sbjct: 554 DGLVPDAVSFNTLI 567



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 153/562 (27%), Positives = 269/562 (47%), Gaps = 51/562 (9%)

Query: 103 KPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVL 162
           +P +ALR  R + ++ G       +CT++  L   G     Y         N   + D +
Sbjct: 156 RPHVALRLLRSL-SERGCDAKPAAYCTVVRGLYAHG---HGY---------NARHLFDEM 202

Query: 163 IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG 222
           +G  +     +   + +L    +K  V +   +  K+L+ G+  +   CN  I+ L ++G
Sbjct: 203 LGRDVFP--DVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDG 260

Query: 223 FSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYN 282
              +A  +   MG + + P +VTYNT++   CK+ ++QEA + L  M  +GC P+  TYN
Sbjct: 261 RLEEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYN 319

Query: 283 VLITGFSRNGELEQARGLIRDMLKLG---------------------------------- 308
            +I G+ ++G L++A  L++D +  G                                  
Sbjct: 320 TIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAK 379

Query: 309 -LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
            LK     YN ++ G   +GL++ AL +  EMV  G  P + TYNI+I GLCK G +SDA
Sbjct: 380 DLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDA 439

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
                + + K  +PD+ ++NTL+ GYC+   +  A  L + + +  + P V+TYN++++G
Sbjct: 440 AVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNG 499

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           LC+ G  +   +  E MI +G  P+ ITY I++   CK+  L  A      M + GL PD
Sbjct: 500 LCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPD 559

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
             ++ T I G  + GD   AY L +++  KG+     T+N+L+       +++ A ++  
Sbjct: 560 AVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFG 619

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
           +M+  G+ PD  TY  ++    +  ++ R       M+ KG  P++ T+  +++  A   
Sbjct: 620 EMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNH 679

Query: 608 RLELAFMYFSEMQVKGIRPNVI 629
           R+  A      M   G+ P V+
Sbjct: 680 RVSEAVAIIHIMVRMGVVPEVV 701



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 172/383 (44%), Gaps = 4/383 (1%)

Query: 344 VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS--YNTLLYGYCRSGNIGE 401
            A T+  Y  LI  L   GR+ D         R ++ PD +   Y   +  Y R+G +  
Sbjct: 31  TASTIPAYRALIRELVSAGRLDDVDAALASA-RSHLAPDSLQPLYVASIQAYARAGRLRA 89

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           A   F+ +      P    YN ++D L      + A ++   M+  G+ PD  T+T+ + 
Sbjct: 90  AVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLK 149

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
             C  G   +A      +  +G      AY T + G    G    A  L +EML +   P
Sbjct: 150 SFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFP 209

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           D+ T+N ++H LC+ G + E+  LL K++  G   +  T    I    E G L     L 
Sbjct: 210 DVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALV 269

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
             M    ++P +VTY  L+       +++ A  Y   M  +G  P+  TYN +I+G C+ 
Sbjct: 270 ERM-GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKS 328

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
             + +A  L  D   +G +P++ TY  LIN  C  G+ + AL L+ E   ++++PD   +
Sbjct: 329 GMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVY 388

Query: 702 SALLLKQLDKDYKVHAVEYLESL 724
           ++L+     +   +HA++ +  +
Sbjct: 389 NSLVKGLCRQGLILHALQVMNEM 411


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  291 bits (746), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 167/518 (32%), Positives = 267/518 (51%), Gaps = 22/518 (4%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A   +  + + G  P++VT++T+L   C E  + EAL+L  +M    C PN VT+  L+ 
Sbjct: 132 ALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMN 187

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV-TRGVA 345
           G  R G + +A  L+  ML+ GL+ +  +Y  I+ G  + G  V ALNL  +M     + 
Sbjct: 188 GLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIK 247

Query: 346 PTLATYNI-----LIYGLCKWGRVSDARHRFFEML-RKNVIPDIISYNTLLYGYCRSGNI 399
           P +  + +     +I G C  GR S+A+    EML RK + PD+++YN L+  + + G  
Sbjct: 248 PNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKF 307

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
            EA  L+DE+  R ++P+ +TY+++IDG C+   L+ A+ +   M  +G  PD+IT+  +
Sbjct: 308 FEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTL 367

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           + G C+   +    +  +EM   GL  +   YTT I G  ++GD + A  L +EM++ G 
Sbjct: 368 IAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGV 427

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVG-----------DGFIPDHITYTSIIHAS 568
            P+++T N L+ GLC  G L++A E+ + M             +G  PD  TY  +I   
Sbjct: 428 CPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGL 487

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
           +  G      +L+  M  +G+ P  +TY  +IH    + RL+ A   F  M  K   PNV
Sbjct: 488 INEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNV 547

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
           +T+  LING C+  R+D    LF +M   GI+ N  TY  LI+     GN   AL +++E
Sbjct: 548 VTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQE 607

Query: 689 MLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
           M+   + PD  T   +L     K+    AV  LE L +
Sbjct: 608 MMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQM 645



 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 162/486 (33%), Positives = 256/486 (52%), Gaps = 24/486 (4%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           + + L +F++M +    P+V     ++  L   G  V+A  +   M E G++P+ +TY T
Sbjct: 164 ISEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGT 219

Query: 249 MLDSFCKEGEMQEALELLWEMQG-RGCSPNGVTY-----NVLITGFSRNGELEQARGLIR 302
           ++D  CK G+   AL LL +M+      PN V +       +I GF  +G   +A+ L++
Sbjct: 220 IVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQ 279

Query: 303 DMLKLGLKVSAH--SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +ML+   K+S    +YN +I  + ++G   EA  L +EM+ RG+ P+  TY+ +I G CK
Sbjct: 280 EMLERK-KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCK 338

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
             R+  A H F+ M  K   PDII++NTL+ GYCR+  + +   L  E+    LV   +T
Sbjct: 339 QNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTIT 398

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y TLI G C+ GDL  AQ L + M++ G+ P+V+T   +++G C  G L  A E F  M 
Sbjct: 399 YTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQ 458

Query: 481 RK-----------GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
           +            G++PD   Y   I+G +  G   EA  L EEM  +G  PD ITYN +
Sbjct: 459 KSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSV 518

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           +HGLCK   L+EA ++   M    F P+ +T+T++I+   + G +  G +LF  M R+G+
Sbjct: 519 IHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 578

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
               +TY  LIH     G +  A   F EM   G+ P+ IT   ++ GL     + +A  
Sbjct: 579 VANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVA 638

Query: 650 LFIDME 655
           +  D++
Sbjct: 639 MLEDLQ 644



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 140/455 (30%), Positives = 239/455 (52%), Gaps = 18/455 (3%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG-IKPSI 243
           ++  V + + + ++ML +GL P+      I+  +   G +V A  + R M E   IKP++
Sbjct: 191 REGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNV 250

Query: 244 VTY-----NTMLDSFCKEGEMQEALELLWEM-QGRGCSPNGVTYNVLITGFSRNGELEQA 297
           V +       M++ FC  G   EA +LL EM + +  SP+ VTYN LI  F + G+  +A
Sbjct: 251 VIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEA 310

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L  +ML  G+  S  +Y+ +I G+ ++  L  A ++   M T+G +P + T+N LI G
Sbjct: 311 EELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAG 370

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
            C+  RV D      EM    ++ + I+Y TL++G+C+ G++  A  L  E+ S  + P 
Sbjct: 371 YCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPN 430

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQ-----------GILPDVITYTIMVNGSCKM 466
           VVT NTL+DGLC  G L+ A ++ + M              G+ PDV TY I+++G    
Sbjct: 431 VVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINE 490

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G    A E + EM  +G+ PD   Y + I G  K     EA ++ + M +K F P+++T+
Sbjct: 491 GKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTF 550

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
             L++G CK G +++  EL  +M   G + + ITY ++IH   ++G++    D+F  M+ 
Sbjct: 551 TTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMA 610

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
            G+ P  +T   ++    ++  L+ A     ++Q+
Sbjct: 611 SGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQM 645



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 147/465 (31%), Positives = 230/465 (49%), Gaps = 22/465 (4%)

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           +++A++L  +M      P+ + +  L+    R G L+    L R M    +  +A+S+  
Sbjct: 59  LEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTI 118

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           ++  +     L  AL+   ++   G  PT+ T++ L++GLC   R+S+A   F +M +  
Sbjct: 119 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCK-- 176

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
             P+++++ TL+ G CR G + EA  L D +    L P  +TY T++DG+C+ GD   A 
Sbjct: 177 --PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 234

Query: 439 QLKENMIN-QGILPDVITY-----TIMVNGSCKMGNLSMAREFFNEML-RKGLQPDRFAY 491
            L   M     I P+V+ +     T M+NG C  G  S A++   EML RK + PD   Y
Sbjct: 235 NLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTY 294

Query: 492 TTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
              I   +K G   EA  L +EML +G  P  ITY+ ++ G CK   L+ A  +   M  
Sbjct: 295 NALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMAT 354

Query: 552 DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLEL 611
            G  PD IT+ ++I        +  G  L + M   GL    +TYT LIH     G L  
Sbjct: 355 KGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNA 414

Query: 612 AFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE-----------GIL 660
           A     EM   G+ PNV+T N L++GLC   ++  A  +F  M++            G+ 
Sbjct: 415 AQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVE 474

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           P+  TY ILI+   N G + EA  LY+EM  R I PD  T+++++
Sbjct: 475 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVI 519



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 137/459 (29%), Positives = 221/459 (48%), Gaps = 22/459 (4%)

Query: 284 LITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG 343
           L +GF     LE A  L  DM++     S   +  ++      G L   ++L  +M  R 
Sbjct: 49  LRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRR 108

Query: 344 VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF 403
           V     ++ IL+   C   ++  A   F ++ +    P +++++TLL+G C    I EA 
Sbjct: 109 VPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEAL 168

Query: 404 LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
            LF ++      P VVT+ TL++GLCR G +  A  L + M+  G+ P+ ITY  +V+G 
Sbjct: 169 DLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 224

Query: 464 CKMGNLSMAREFFNEMLR-KGLQPDRFAY-----TTQIAGELKLGDTSEAYRLQEEMLA- 516
           CKMG+   A     +M     ++P+   +     T  I G    G  SEA +L +EML  
Sbjct: 225 CKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLER 284

Query: 517 KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
           K   PD++TYN L++   K G   EA EL  +M+  G IP  ITY+S+I    +   L  
Sbjct: 285 KKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDA 344

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
              +F  M  KG SP ++T+  LI  +    R++       EM   G+  N ITY  LI+
Sbjct: 345 AEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIH 404

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE--- 693
           G C++  ++ A  L  +M   G+ PN  T   L++  C+ G  ++AL ++K M   +   
Sbjct: 405 GFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDI 464

Query: 694 --------IEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
                   +EPD  T++ L+   +++   + A E  E +
Sbjct: 465 DASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 503


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  291 bits (745), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 156/537 (29%), Positives = 288/537 (53%), Gaps = 2/537 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
           ++  + +F +M+++   P +   ++++  + + N F V    +   M   GI  +  TY+
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDV-VISLGEQMQNLGIPHNHYTYS 120

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
            +L+ FC+  ++  AL +L +M   G  P+ VT + L+ G+     + +A  L+  M+++
Sbjct: 121 ILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEM 180

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           G K    ++N +I G        EA+ L + MV RG  P L TY  ++ GLCK G +  A
Sbjct: 181 GYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 240

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
                +M +  +  +++ YNT++ G C+  ++ +AF LF+++ ++ + P V TYN+LI  
Sbjct: 241 LSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISC 300

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           LC YG    A +L  +MI + I P+V+T+  +++   K G L  A + F+EM+++ + P+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 360

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              Y + I G        EA ++   M++K   PD++TYN L+ G CK   +EE  EL R
Sbjct: 361 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFR 420

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
           +M   G + + +TY ++I    + GD    + +F  M+  G+ P ++TY++L+      G
Sbjct: 421 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 480

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
           +LE A + F  +Q   + PN+ TYN +I G+C+  +++  + LF  +  +G+ PN   YT
Sbjct: 481 KLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 540

Query: 668 ILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
            +I+  C  G  +EA  L++EM +    PD   ++ L+  +L    K  + E ++ +
Sbjct: 541 TMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEM 597



 Score =  289 bits (739), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 162/496 (32%), Positives = 269/496 (54%), Gaps = 4/496 (0%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +LL  + ++S +   L V  KM++ G  PD+   + ++          +A  +   M E 
Sbjct: 121 ILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEM 180

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G KP  VT+NT++       +  EA+ L+  M  RGC P+  TY  ++ G  + G+++ A
Sbjct: 181 GYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 240

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L++ M K  ++ +   YN II G  +   + +A +L  +M T+G+ P + TYN LI  
Sbjct: 241 LSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISC 300

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           LC +GR SDA     +M+ + + P+++++N+L+  + + G + EA  LFDE+  R++ P 
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 360

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           +VTYN+LI+G C +  L+ AQQ+   M+++  LPDV+TY  ++ G CK   +    E F 
Sbjct: 361 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFR 420

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           EM ++GL  +   Y T I G  + GD   A ++ ++M++ G PPD+ITY++L+ GLCK G
Sbjct: 421 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 480

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            LE+A  +   +      P+  TY  +I    + G +  G DLF ++  KG+ P ++ YT
Sbjct: 481 KLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 540

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG--LFIDME 655
            +I     +G  E A   F EM+  G  P+   YN LI    RLR  D+A    L  +M 
Sbjct: 541 TMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRA--RLRDGDKAASAELIKEMR 598

Query: 656 EEGILPNKYTYTILIN 671
             G + +  T +++IN
Sbjct: 599 SCGFVGDASTISMVIN 614



 Score =  263 bits (672), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 141/435 (32%), Positives = 240/435 (55%), Gaps = 4/435 (0%)

Query: 180 LLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGI 239
           L ++ K S   + + + ++M+  G  PD+     ++  L   G    A  + + M +  I
Sbjct: 196 LFLHNKAS---EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKI 252

Query: 240 KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
           + ++V YNT++D  CK   M +A +L  +M+ +G  P+  TYN LI+     G    A  
Sbjct: 253 EANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASR 312

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
           L+ DM++  +  +  ++N +I  ++++G L+EA  L +EM+ R + P + TYN LI G C
Sbjct: 313 LLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFC 372

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
              R+ +A+  F  M+ K+ +PD+++YNTL+ G+C++  + E   LF E+  R LV   V
Sbjct: 373 MHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 432

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
           TYNTLI GL + GD ++AQ++ + M++ G+ PD+ITY+I+++G CK G L  A   F  +
Sbjct: 433 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 492

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
            +  ++P+ + Y   I G  K G   + + L   +  KG  P++I Y  ++ G C+ G  
Sbjct: 493 QKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 552

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           EEA+ L R+M  DG +PD   Y ++I A L  GD     +L   M   G      T +++
Sbjct: 553 EEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMV 612

Query: 600 IHAHAARGRLELAFM 614
           I+     GRLE +++
Sbjct: 613 INM-LHDGRLEKSYL 626



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 134/422 (31%), Positives = 218/422 (51%), Gaps = 4/422 (0%)

Query: 288 FSRNG----ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG 343
            SRNG    +L+ A  L  +M+K     S   ++ ++   ++       ++L E+M   G
Sbjct: 52  LSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG 111

Query: 344 VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF 403
           +     TY+IL+   C+  ++  A     +M++    PDI++ ++LL GYC    I EA 
Sbjct: 112 IPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV 171

Query: 404 LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
            L D++      P  VT+NTLI GL  +     A  L + M+ +G  PD+ TY  +VNG 
Sbjct: 172 ALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 231

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
           CK G++ +A     +M +  ++ +   Y T I G  K     +A+ L  +M  KG  PD+
Sbjct: 232 CKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDV 291

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
            TYN L+  LC  G   +A+ LL  M+     P+ +T+ S+I A  + G L     LF+ 
Sbjct: 292 FTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDE 351

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           M+++ + P +VTY  LI+      RL+ A   F+ M  K   P+V+TYN LI G C+ +R
Sbjct: 352 MIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKR 411

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSA 703
           +++   LF +M + G++ N  TY  LI     AG+   A +++K+M+   + PD  T+S 
Sbjct: 412 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 471

Query: 704 LL 705
           LL
Sbjct: 472 LL 473



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 141/493 (28%), Positives = 242/493 (49%), Gaps = 41/493 (8%)

Query: 218 LRDNGFS-VKAREVYRMMGEFGIK----PSIVTYNTMLDSFCKEGEMQEALELLWEMQGR 272
           L  NG S +K  +   + GE  +K    PSI+ ++ +L +  K  +    + L  +MQ  
Sbjct: 52  LSRNGLSELKLDDAVALFGEM-VKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNL 110

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA 332
           G   N  TY++L+  F R  +L  A  ++  M+KLG +                      
Sbjct: 111 GIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYE---------------------- 148

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
                        P + T + L+ G C   R+S+A     +M+     PD +++NTL++G
Sbjct: 149 -------------PDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHG 195

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
                   EA  L D + +R   P + TY T+++GLC+ GD+++A  L + M    I  +
Sbjct: 196 LFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEAN 255

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
           V+ Y  +++G CK  ++  A + FN+M  KG++PD F Y + I+     G  S+A RL  
Sbjct: 256 VVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLS 315

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           +M+ +   P+++T+N L+    K G L EA +L  +M+     P+ +TY S+I+      
Sbjct: 316 DMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHD 375

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
            L   + +F  M+ K   P +VTY  LI       R+E     F EM  +G+  N +TYN
Sbjct: 376 RLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 435

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
            LI GL +    D A  +F  M  +G+ P+  TY+IL++  C  G  ++AL +++ +   
Sbjct: 436 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 495

Query: 693 EIEPDYCTHSALL 705
           ++EP+  T++ ++
Sbjct: 496 KMEPNIYTYNIMI 508


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  291 bits (745), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 161/504 (31%), Positives = 257/504 (50%), Gaps = 36/504 (7%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G  P+I TYN +L+  CK G ++EA++LL ++   GC+P+ VTY  LI G  +     +A
Sbjct: 16  GCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEA 75

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L ++M   GL +    Y  +I    + G + +A ++ + M + G  P + T + +I G
Sbjct: 76  YKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDG 135

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           L K GR+  A   F  M  + + P+ + Y+ L++G C++  +  A  +  +++     P 
Sbjct: 136 LSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPD 195

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA-REFF 476
            +TYN LIDGLC+ GD+E A+   + M+  G  PDV TY I+++G CK GN   A     
Sbjct: 196 TITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLA 255

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
            E    G   D   YT  +    K     EA  L E++ A G  P + TYN L++GLCK+
Sbjct: 256 QETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKM 315

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHA----------------------------- 567
           G LEEA +LLRK+V +G  PD +TYTS+I                               
Sbjct: 316 GRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCY 375

Query: 568 ------SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
                  L+ G + +   ++  M   G  P +VT + +I   +  GR+  A   F  M+ 
Sbjct: 376 TALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEA 435

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
           +G+ PN + Y+ALI+GLC+ R++D A  +   M++    P+  TY ILI+  C +G+ + 
Sbjct: 436 RGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEA 495

Query: 682 ALRLYKEMLDREIEPDYCTHSALL 705
           A   + EML+   +PD  T++ L+
Sbjct: 496 ARAFFDEMLEAGCKPDVYTYNILI 519



 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 163/553 (29%), Positives = 265/553 (47%), Gaps = 36/553 (6%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +E+ + +  K+  NG  P +   N ++  L   G   +A ++ R + + G  P +VTY +
Sbjct: 2   IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++D   KE    EA +L  EM  RG + + V Y  LI    + G++ QA  + + M   G
Sbjct: 62  LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
                 + + +I G S+ G +  A+ + + M  RG+AP    Y+ LI+GLCK  ++  A 
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               +M +    PD I+YN L+ G C+SG++  A   FDE+      P V TYN LI G 
Sbjct: 182 EMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGF 241

Query: 429 CRYGDLEVAQQ------------------------------------LKENMINQGILPD 452
           C+ G+ + A                                      L E +   G  P 
Sbjct: 242 CKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPT 301

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
           + TY  ++NG CKMG L  A +   +++  G  PD   YT+ I G  K   + EAY+L +
Sbjct: 302 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 361

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           EM  +G   D + Y  L+  L + G + +A+ + + M   G +PD +T +++I    + G
Sbjct: 362 EMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAG 421

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
            +     +F +M  +GL+P  V Y+ LIH      +++ A    ++M+     P+ ITYN
Sbjct: 422 RIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYN 481

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
            LI+GLC+   ++ A   F +M E G  P+ YTY ILI+  C AGN   A  ++ +M   
Sbjct: 482 ILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSS 541

Query: 693 EIEPDYCTHSALL 705
               +  T+ AL+
Sbjct: 542 RCSANVVTYGALI 554



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 154/499 (30%), Positives = 243/499 (48%), Gaps = 1/499 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F +M   GL  D      +I+ L   G   +A  VY+ M   G  P +VT +TM+D   
Sbjct: 78  LFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLS 137

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K G +  A+ +   M+ RG +PN V Y+ LI G  +  +++ A  ++  M K        
Sbjct: 138 KAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTI 197

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +YN +I G  + G +  A    +EM+  G  P + TYNILI G CK G    A H   + 
Sbjct: 198 TYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQE 257

Query: 375 LRKN-VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
              N    DI +Y  ++    ++  I EA  L +++ +    PT+ TYN L++GLC+ G 
Sbjct: 258 TTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGR 317

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           LE A  L   +++ G  PDV+TYT +++G  K      A + F EM  +GL  D   YT 
Sbjct: 318 LEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTA 377

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            I   L+ G   +A  + + M + G  PD++T + ++ GL K G +  A  + + M   G
Sbjct: 378 LIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARG 437

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
             P+ + Y+++IH   +   +    ++   M +   +P  +TY +LI      G +E A 
Sbjct: 438 LAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAAR 497

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
            +F EM   G +P+V TYN LI+G C+    D A G+F DM       N  TY  LI+  
Sbjct: 498 AFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGL 557

Query: 674 CNAGNWQEALRLYKEMLDR 692
           C      +A   ++ M +R
Sbjct: 558 CKRRQLTKASLYFQHMKER 576



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 143/471 (30%), Positives = 226/471 (47%), Gaps = 36/471 (7%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           + Q   V+  M  +G +PDV   + +I  L   G    A  +++ M   G+ P+ V Y+ 
Sbjct: 107 IPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSA 166

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++   CK  +M  ALE+L +M+   C+P+ +TYNVLI G  ++G++E AR    +ML+ G
Sbjct: 167 LIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAG 226

Query: 309 LKVSAHSYNPIICGYSEKG------------------------------------LLVEA 332
            K   ++YN +I G+ + G                                     + EA
Sbjct: 227 CKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEA 286

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
           + L E++   G  PT+ATYN L+ GLCK GR+ +A     +++     PD+++Y +L+ G
Sbjct: 287 VALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDG 346

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
             +     EA+ LF E+  R L    V Y  LI  L + G +  A  + + M + G +PD
Sbjct: 347 LGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPD 406

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
           V+T + M++G  K G +  A   F  M  +GL P+   Y+  I G  K      A  +  
Sbjct: 407 VVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLA 466

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           +M      PD ITYN+L+ GLCK G +E A     +M+  G  PD  TY  +I    + G
Sbjct: 467 QMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAG 526

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           +      +F++M     S  +VTY  LI     R +L  A +YF  M+ +G
Sbjct: 527 NTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMKERG 577



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 137/486 (28%), Positives = 230/486 (47%), Gaps = 26/486 (5%)

Query: 70  PWAFCNNRWVSDHFQAVVSDPELLVRVLNRIREKPRI--ALRFFRWVETQPGVKRDEFVF 127
           P A    + ++ H    V D   L  +++ + +  RI  A+R F+ +E + G+  +E V+
Sbjct: 108 PQASSVYKTMTSH--GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEAR-GLAPNEVVY 164

Query: 128 CTILEILIESGLLRSAYWVV---ETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYT 184
             ++  L ++  +  A  ++   +   C       +VLI G                   
Sbjct: 165 SALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDG-----------------LC 207

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF-GIKPSI 243
           K   VE     F++ML  G  PDV   N +I      G +  A           G    I
Sbjct: 208 KSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDI 267

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
            TY  ++D   K  +++EA+ L+ ++   GC+P   TYN L+ G  + G LE+A  L+R 
Sbjct: 268 HTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRK 327

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           ++  G      +Y  +I G  ++    EA  L +EM  RG+A     Y  LI  L + G+
Sbjct: 328 IVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGK 387

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           +  A   +  M     +PD+++ +T++ G  ++G IG A  +F  + +R L P  V Y+ 
Sbjct: 388 IPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSA 447

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           LI GLC+   ++ A ++   M      PD ITY I+++G CK G++  AR FF+EML  G
Sbjct: 448 LIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAG 507

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
            +PD + Y   I+G  K G+T  A  + ++M +     +++TY  L+ GLCK   L +A+
Sbjct: 508 CKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKAS 567

Query: 544 ELLRKM 549
              + M
Sbjct: 568 LYFQHM 573


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 168/554 (30%), Positives = 276/554 (49%), Gaps = 40/554 (7%)

Query: 169 SCVSIK--ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLR--DNGFS 224
           SC+ I   +LD+ +  Y       Q   +FN+M R G+ P +  CN ++  L    +  S
Sbjct: 118 SCLHISKPLLDISIGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHS 177

Query: 225 VK-AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNV 283
           ++ ++ V+    + G+K +  ++N ++   C E    EA+ +L +M+  GC P+ +TYN 
Sbjct: 178 IRLSKAVFTDFIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNT 237

Query: 284 LITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG 343
           ++ G  + G L +AR L+ DM   GL  +  ++N ++ G    G L EA N+ E M    
Sbjct: 238 ILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNS 297

Query: 344 VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF 403
           V P   TYN++I G CK GR+++A     EM    + PD+++YNTL+ G    G+  E F
Sbjct: 298 VVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGF 357

Query: 404 LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
            L +E+  R + P  VTYN ++    + G ++   +    M   G LPD++TY  +++  
Sbjct: 358 KLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWH 417

Query: 464 CKMGNLSMAREFFNEMLRKGLQ-----------------------------------PDR 488
           CK+G +  A    +EM RKGL+                                    D 
Sbjct: 418 CKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDE 477

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
            +Y T I G  K    S+A RL +EM  K   P +ITYN ++ GLC++G   +A + L +
Sbjct: 478 VSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDE 537

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           ++  G +PD ITY +IIH   + G + +     N M+ K   P +VT   L+      G 
Sbjct: 538 LLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGM 597

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           LE A   F+    KG   + ++YN +I  LC+ +R  +A+ L  +MEE+ + P+ YTY  
Sbjct: 598 LEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNA 657

Query: 669 LINENCNAGNWQEA 682
           ++    +AG  ++A
Sbjct: 658 ILGGLTDAGRMKDA 671



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 131/449 (29%), Positives = 224/449 (49%), Gaps = 12/449 (2%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V   M +N ++PD    N +I      G   +A  +   M    + P +VTYNT+++   
Sbjct: 289 VIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCF 348

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           + G  +E  +L+ EM+GRG  PN VTYNV++  F + G++++    +R M + G      
Sbjct: 349 EHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIV 408

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +YN +I  + + G + EA  L +EM  +G+     T N ++  LC+  ++ +A       
Sbjct: 409 TYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSA 468

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
            R+    D +SY TL+ GY +     +A  L+DE++ + ++P+++TYN++I GLC+ G  
Sbjct: 469 RRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKT 528

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
             A    + ++  G++PD ITY  +++G C+ G +  A +F N+M+ K  +PD     T 
Sbjct: 529 NQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTL 588

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           + G  K G   +A +L    ++KG   D ++YN ++  LCK     EA +LL +M     
Sbjct: 589 LCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKL 648

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            PD  TY +I+    + G ++   +  + +  KG S     +  L     AR        
Sbjct: 649 GPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSEN--QFLELGKRQDART------- 699

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRR 643
             SE+  +   PN I Y+  IN LC   R
Sbjct: 700 --SEIPQEP-HPNAIAYSNKINELCSQGR 725


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 149/435 (34%), Positives = 244/435 (56%), Gaps = 1/435 (0%)

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
           R CSPN  T+ V++  F + G+L     L   ML  G+      YN +I GY++KG + E
Sbjct: 2   RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
           A  L EEMV+ G+ P++ TYN L+   CK  ++ +A   F  M  K   PD+++Y+T++ 
Sbjct: 62  ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121

Query: 392 GYCRSGNIGEAF-LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
           G C++G + EA  +LF ++  R      V YN LI+GLC+  ++E A +L E M ++G +
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
           PD ITY  +++G C+MG +S A++FF+ M  +G  PD  AY   +    K G T EA +L
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKL 241

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
            ++++AKG+ PD +TYN ++ GL +  +++EA E+ +KMV  G  P+  TY+ ++     
Sbjct: 242 FKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCR 301

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
              +     +   M + G  P +VTY +L+        ++ A   FS M   G  P++++
Sbjct: 302 AKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVS 361

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           Y+ ++NGLC+  ++  A  LF  M E  ++P+  T+ IL++  C AG   EA  L  +M 
Sbjct: 362 YSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMT 421

Query: 691 DREIEPDYCTHSALL 705
                PDY  ++ L+
Sbjct: 422 CSGCAPDYVAYNTLM 436



 Score =  282 bits (721), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 137/453 (30%), Positives = 264/453 (58%), Gaps = 1/453 (0%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P+  T+  +L SFCK+G++++  +L  +M   G SP+G+ YN+LI G+++ G +++A  L
Sbjct: 6   PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
             +M+ +GL+ S ++YN ++  + ++  + EA+ L + M  +G  P + TY+ +I GLCK
Sbjct: 66  YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125

Query: 361 WGRVSDARHRFF-EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
            G+V++A    F +M+ +    + ++YN L+ G C+  NI  A+ L +E+ S+  VP  +
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNI 185

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
           TYNT++ GLCR G +  A+Q  ++M ++G  PDV+ Y  +++   K G    A + F ++
Sbjct: 186 TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDV 245

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
           + KG  PD   Y + + G  +  +  EA  + ++M+A G  P+  TY++++ G C+   +
Sbjct: 246 IAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKV 305

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           ++A+++L +M   G +PD +TY  ++    +   + +  +LF+ M+  G +P +V+Y+V+
Sbjct: 306 DDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVV 365

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           ++      ++  A + F  M  + + P+V+T+N L++GLC+  ++D+A  L   M   G 
Sbjct: 366 LNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGC 425

Query: 660 LPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
            P+   Y  L+N     G   +A RL + M ++
Sbjct: 426 APDYVAYNTLMNGLRKQGRHIQADRLTQAMKEK 458



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 139/447 (31%), Positives = 241/447 (53%), Gaps = 1/447 (0%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           ++L  + K+  +     +F +ML NG+ PD    N +I      G   +A  +Y  M   
Sbjct: 13  VVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSV 72

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G++PSI TYN++L++FCKE +M+EA+EL   M  +G  P+ VTY+ +I+G  + G++ +A
Sbjct: 73  GLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEA 132

Query: 298 -RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
              L   M++ G   +  +YN +I G  +   +  A  L EEM ++G  P   TYN ++ 
Sbjct: 133 LEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILS 192

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           GLC+ G+VS+A+  F  M  +   PD+++YN LL    + G   EA  LF ++ ++  +P
Sbjct: 193 GLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMP 252

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
             VTYN+++ GL R  +++ A+++ + M+  G  P+  TY+I+++G C+   +  A +  
Sbjct: 253 DTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVL 312

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
            EM + G  PD   Y   + G  K     +A+ L   M+  G  PD+++Y+V+++GLCK 
Sbjct: 313 EEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKT 372

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
             + +A  L  +M+    +PD +T+  ++    + G L   +DL + M   G +P  V Y
Sbjct: 373 NKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAY 432

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKG 623
             L++    +GR   A      M+ KG
Sbjct: 433 NTLMNGLRKQGRHIQADRLTQAMKEKG 459



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 144/471 (30%), Positives = 246/471 (52%), Gaps = 21/471 (4%)

Query: 123 DEFVFCTILEILIESGLLRSAYWVVETVV--CVNMHGI-LDVLIGGGLSSCVSIKILDLL 179
           + + F  +L+   + G LR  Y + E ++   ++  GI  ++LI G              
Sbjct: 7   NRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDG-------------- 52

Query: 180 LLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGI 239
              Y KK  V++   ++ +M+  GL P +   N ++          +A E+++ M E G 
Sbjct: 53  ---YAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGF 109

Query: 240 KPSIVTYNTMLDSFCKEGEMQEALELLW-EMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           +P +VTY+T++   CK G++ EALE+L+ +M  RGCS N V YN LI G  ++  +E+A 
Sbjct: 110 EPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAY 169

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L+ +M   G      +YN I+ G    G + EA    + M +RG +P +  YN L+  L
Sbjct: 170 KLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDAL 229

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
            K G+  +A   F +++ K  +PD ++YN++L G  R  N+ EA  +F ++ +    P  
Sbjct: 230 YKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNG 289

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
            TY+ ++ G CR   ++ A ++ E M   G +PDV+TY I+++G CK   +  A E F+ 
Sbjct: 290 ATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFST 349

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M+  G  PD  +Y+  + G  K     +A  L + M+ +   PD++T+N+L+ GLCK G 
Sbjct: 350 MVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGK 409

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           L+EA +LL +M   G  PD++ Y ++++   + G   +   L   M  KG 
Sbjct: 410 LDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGF 460



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 115/387 (29%), Positives = 192/387 (49%), Gaps = 14/387 (3%)

Query: 103 KPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVL 162
           K + A+  F+ +  + G + D   + TI+  L ++G +  A           +  +   +
Sbjct: 93  KMKEAMELFKTM-AEKGFEPDVVTYSTIISGLCKTGKVTEA-----------LEMLFHKM 140

Query: 163 IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG 222
           I  G S+  +    + L+    K   +E+   +  +M   G +PD    N I+  L   G
Sbjct: 141 IERGCSA--NTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMG 198

Query: 223 FSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYN 282
              +A++ +  M   G  P +V YN +LD+  KEG+  EA++L  ++  +G  P+ VTYN
Sbjct: 199 KVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYN 258

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
            ++ G +R   +++A  + + M+  G   +  +Y+ ++ G+     + +A  + EEM   
Sbjct: 259 SILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKI 318

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           G  P + TYNIL+ GLCK   V  A   F  M+     PDI+SY+ +L G C++  + +A
Sbjct: 319 GAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDA 378

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
            +LFD +  R LVP VVT+N L+DGLC+ G L+ A+ L + M   G  PD + Y  ++NG
Sbjct: 379 RVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNG 438

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRF 489
             K G    A      M  KG   D F
Sbjct: 439 LRKQGRHIQADRLTQAMKEKGFLSDCF 465



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 87/257 (33%), Positives = 137/257 (53%), Gaps = 1/257 (0%)

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
           P+  T+ +++   CK G L    + F +ML  G+ PD   Y   I G  K G   EA RL
Sbjct: 6   PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
            EEM++ G  P + TYN L++  CK   ++EA EL + M   GF PD +TY++II    +
Sbjct: 66  YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125

Query: 571 MGDLRRGRD-LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
            G +    + LF+ M+ +G S   V Y  LI+       +E A+    EM  KG  P+ I
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNI 185

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           TYN +++GLCR+ ++ +A   F  M   G  P+   Y  L++     G   EA++L+K++
Sbjct: 186 TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDV 245

Query: 690 LDREIEPDYCTHSALLL 706
           + +   PD  T++++LL
Sbjct: 246 IAKGYMPDTVTYNSILL 262


>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
 gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  290 bits (743), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 162/525 (30%), Positives = 281/525 (53%), Gaps = 3/525 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK-VLRDNGFSVKAREVYRMMGEFGIKP 241
           +  K  VE  L     +++ G   D+  CN+I+K +   N   V A + + M+   G KP
Sbjct: 247 FMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQNDIGV-ADDYFNMVVRIGPKP 305

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
           ++VT++T++D++CKEG + +A  L   M G G +P+ + Y++LI G  + G LE  + L+
Sbjct: 306 NVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLL 365

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
              L  G+K+    ++  +  Y + G L   + + + M+  G++P + + +ILI G C+ 
Sbjct: 366 LVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQN 425

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           GR+ +A   F ++L+    P I++Y+ L+ G+C+SGN+ + F L++++  +   P  + Y
Sbjct: 426 GRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVY 485

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           + LI+GLC+ G +  A +     +N+G+ P+V T   +++  C++  +  A + +  M  
Sbjct: 486 SVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGM 545

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
             ++ D   YT  I G  + G   EA  L  +ML K F PD+ITY  L+ GLCKL     
Sbjct: 546 LNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSA 605

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
              +   M  +   PD   Y  +I+     G L     LF +++ +G  P + T+  +I 
Sbjct: 606 GLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMIC 665

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
            +    RL+ A   F++M  + +RPN IT+  LI+  CR  R+D A  +F  M EEG  P
Sbjct: 666 CYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEP 725

Query: 662 NKYTYTILINENCNAGNWQEA-LRLYKEMLDREIEPDYCTHSALL 705
           N  TY+ LI+    + +  E+ L+LY EML+  I P+  ++S L+
Sbjct: 726 NLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILI 770



 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 165/535 (30%), Positives = 276/535 (51%), Gaps = 1/535 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K+  +++  ++F+ M  NG+ PD+   + +I  L   G     + +  +  + GIK  
Sbjct: 317 YCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLD 376

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +V +++ +D++ K G++   +++   M   G SPN V+ ++LI GF +NG + +A GL  
Sbjct: 377 VVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFV 436

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            +LKLG + S  +Y+ +I G+ + G L +   L E+M+ +   P    Y++LI GLCK G
Sbjct: 437 QILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQG 496

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            V DA   FF+ + + + P++ + NTLL  +CR   I  A  ++  +   N+    VTY 
Sbjct: 497 LVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYT 556

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            LI G  ++G ++ A  L   M+ +   PDVITY  +++G CK+   S     F+ M + 
Sbjct: 557 ILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKN 616

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
            + PD   Y   I    + G    A  L   ++ +G  PD+ T+N ++   C    L++A
Sbjct: 617 AVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDA 676

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            +L  KM  +   P+ IT+T +I A    G +     +F+ ML +G  P LVTY+ LIH 
Sbjct: 677 VQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHG 736

Query: 603 H-AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
           +  ++  +E     ++EM    I PN+++Y+ LI+GLC+   + +A   F    ++ +LP
Sbjct: 737 YFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLP 796

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVH 716
           +   YTILI   C  G   EA+ LY  ML   + PD      L   QL K    H
Sbjct: 797 DVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPDRFLERTLEEYQLKKAGAKH 851



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 120/404 (29%), Positives = 193/404 (47%), Gaps = 56/404 (13%)

Query: 136 ESGLLRSAYWVVETVV---CVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQC 192
           +SG LR  +++ E ++   C     +  VLI G                   K+ +V   
Sbjct: 459 KSGNLRDGFYLYEDMIKKRCEPDTIVYSVLING-----------------LCKQGLVGDA 501

Query: 193 LLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDS 252
           L  F + +  GL P+V   N ++         V A +VY +MG   IK   VTY  ++  
Sbjct: 502 LRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKG 561

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTY------------------------------- 281
             + G + EAL L ++M  +   P+ +TY                               
Sbjct: 562 AAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPD 621

Query: 282 ----NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
               NVLI   SR G LE A GL   +++ G K    ++N +IC Y     L +A+ L  
Sbjct: 622 IAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFA 681

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
           +M +  + P   T+ ILI   C+ GR+ DA   F +ML +   P++++Y+ L++GY +S 
Sbjct: 682 KMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQ 741

Query: 398 NIGEAFL-LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
           ++ E+ L L++E+   N+ P +V+Y+ LIDGLC+ G ++ A       +++ +LPDVI Y
Sbjct: 742 SMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAY 801

Query: 457 TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
           TI++ G CK+G L+ A   ++ ML   L PDRF   T    +LK
Sbjct: 802 TILIRGYCKVGRLTEAMMLYDNMLLNRLTPDRFLERTLEEYQLK 845



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 185/387 (47%), Gaps = 1/387 (0%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           SI     L+  + K   +     ++  M++    PD    + +I  L   G    A   +
Sbjct: 446 SILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFF 505

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
                 G+ P++ T NT+LDSFC+   +  A+++ + M       + VTY +LI G ++ 
Sbjct: 506 FQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQF 565

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G +++A  L   MLK   K    +Y  +I G  +       L + + M    VAP +A Y
Sbjct: 566 GRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIY 625

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           N+LI    + G +  A   F  ++ +   PD+ ++NT++  YC    + +A  LF ++ S
Sbjct: 626 NVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTS 685

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN-LS 470
             L P  +T+  LID  CR G ++ A  +   M+ +G  P+++TY+ +++G  K  + + 
Sbjct: 686 EQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMME 745

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
              + +NEML   + P+  +Y+  I G  K G   EA       L K   PD+I Y +L+
Sbjct: 746 SGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILI 805

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPD 557
            G CK+G L EA  L   M+ +   PD
Sbjct: 806 RGYCKVGRLTEAMMLYDNMLLNRLTPD 832


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  290 bits (743), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 182/607 (29%), Positives = 301/607 (49%), Gaps = 31/607 (5%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVV-----------CVNM 155
           AL  F  V  +  + ++  ++  I+ +L  + L   A  ++  ++           C ++
Sbjct: 53  ALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCSV 112

Query: 156 HGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRII 215
             +L  L     SS  +  +  +L++ +++  +VE+ L V+ KM    +LP ++ CN ++
Sbjct: 113 FNVLSRL----ESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVL 165

Query: 216 KVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCS 275
             L   G      +VY  M   G  P++VTY T++D  C++G+  +A  L  EM  +   
Sbjct: 166 DGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIF 225

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           P  V Y +LI G      + +A  + R M   G+  + ++YN ++ GY +   + +AL L
Sbjct: 226 PTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALEL 285

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
            +EM+  G+ P + T+ ILI GLCK   +  AR    +M    V+P+I  YN L+ GYC+
Sbjct: 286 YQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCK 345

Query: 396 SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
           +GN+ EA  L  E+    ++P V TY+ LI GLC    +E A  L + M  +G LP+ +T
Sbjct: 346 AGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVT 405

Query: 456 YTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML 515
           Y  +++G CK GN+  A E  ++M  KG++P+   ++T I G  K G    A  L  EM+
Sbjct: 406 YNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMV 465

Query: 516 AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLR 575
            KG  PD++ Y  L+ G  K G+ +EA  L ++M   G  P+  T + +I    + G + 
Sbjct: 466 IKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRIS 525

Query: 576 RGRDLF-------------NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
               LF             N + R   SP  V YT LI      GR+  A  +FS+M+  
Sbjct: 526 DAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCS 585

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
           G+RP+V T   +I G  R   +     L  D+ + GI+PN   Y +L      +G  + A
Sbjct: 586 GLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSA 645

Query: 683 LRLYKEM 689
           LR  +++
Sbjct: 646 LRCSEDL 652



 Score =  268 bits (685), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 149/468 (31%), Positives = 247/468 (52%), Gaps = 16/468 (3%)

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           +  ++ +F + G ++EAL + ++M      P     N+++ G  + G  +    +  DM+
Sbjct: 129 FGVLIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGLVKKGRFDTMWKVYGDMV 185

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
             G   +  +Y  +I G   +G  ++A  L +EM+ + + PT+  Y ILI GLC   R+S
Sbjct: 186 ARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRIS 245

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
           +A   F  M    ++P++ +YNT++ GYC+  ++ +A  L+ E+    L+P VVT+  LI
Sbjct: 246 EAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILI 305

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           DGLC+  ++  A++   +M + G++P++  Y  +++G CK GNLS A    +E+ +  + 
Sbjct: 306 DGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEIL 365

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           PD F Y+  I G   +    EA  L +EM  KGF P+ +TYN L+ G CK G++E+A E+
Sbjct: 366 PDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEV 425

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
             +M   G  P+ IT++++I    + G +     L+  M+ KGL P +V YT LI  H  
Sbjct: 426 CSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFK 485

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI------------- 652
            G  + AF    EMQ  G+ PNV T + LI+GLC+  RI  A  LF+             
Sbjct: 486 DGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTN 545

Query: 653 DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
           +++     PN   YT LI   C  G   +A + + +M    + PD  T
Sbjct: 546 ELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFT 593



 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 149/468 (31%), Positives = 240/468 (51%), Gaps = 25/468 (5%)

Query: 260 QEALELLWEMQGRG-CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL----------- 307
            +ALEL   +  R   + N   Y+ +I   +      +AR L+RD+++            
Sbjct: 51  NQALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICC 110

Query: 308 ----------GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
                       K + + +  +I  +SE GL+ EAL +  +M    V P +   N+++ G
Sbjct: 111 SVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDG 167

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           L K GR       + +M+ +   P++++Y TL+ G CR G+  +AF LFDE+  + + PT
Sbjct: 168 LVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPT 227

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           VV Y  LI GLC    +  A+ +   M N G+LP++ TY  M++G CK+ ++  A E + 
Sbjct: 228 VVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQ 287

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           EML  GL P+   +   I G  K  +   A +   +M + G  P++  YN L+ G CK G
Sbjct: 288 EMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAG 347

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
           +L EA  L  ++     +PD  TY+ +I     +  +     L   M +KG  P  VTY 
Sbjct: 348 NLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYN 407

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
            LI  +   G +E A    S+M  KGI PN+IT++ LI+G C+  +++ A GL+ +M  +
Sbjct: 408 TLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIK 467

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           G+LP+   YT LI+ +   GN +EA RL+KEM +  + P+  T S L+
Sbjct: 468 GLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLI 515



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 125/384 (32%), Positives = 205/384 (53%), Gaps = 13/384 (3%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K + V++ L ++ +ML +GLLP+V     +I  L      V AR+    M  FG+ P+
Sbjct: 273 YCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPN 332

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           I  YN ++D +CK G + EAL L  E++     P+  TY++LI G      +E+A GL++
Sbjct: 333 IFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQ 392

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M K G   +A +YN +I GY ++G + +A+ +  +M  +G+ P + T++ LI G CK G
Sbjct: 393 EMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAG 452

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           ++  A   + EM+ K ++PD+++Y  L+ G+ + GN  EAF L  E++   L P V T +
Sbjct: 453 KMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLS 512

Query: 423 TLIDGLCRYGDLEVAQQL------------KENMINQGIL-PDVITYTIMVNGSCKMGNL 469
            LIDGLC+ G +  A +L            K N +++ +  P+ + YT ++ G C  G +
Sbjct: 513 CLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRI 572

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A +FF++M   GL+PD F     I G  +     +   LQ ++L  G  P+   Y VL
Sbjct: 573 FKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVL 632

Query: 530 VHGLCKLGSLEEANELLRKMVGDG 553
             G  + G L+ A      + G G
Sbjct: 633 AKGYEESGYLKSALRCSEDLSGIG 656



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/326 (25%), Positives = 149/326 (45%), Gaps = 48/326 (14%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           +I + + L+  Y K   + + L + +++ ++ +LPDV   + +IK L       +A  + 
Sbjct: 332 NIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLL 391

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
           + M + G  P+ VTYNT++D +CKEG M++A+E+  +M  +G  PN +T++ LI G+ + 
Sbjct: 392 QEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKA 451

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT- 350
           G++E A GL  +M+  GL     +Y  +I G+ + G   EA  L +EM   G+ P + T 
Sbjct: 452 GKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTL 511

Query: 351 -----------------------------------------------YNILIYGLCKWGR 363
                                                          Y  LI GLC  GR
Sbjct: 512 SCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGR 571

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           +  A   F +M    + PD+ +   ++ G+ R+ ++ +  +L  ++    ++P    Y  
Sbjct: 572 IFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRV 631

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGI 449
           L  G    G L+ A +  E++   GI
Sbjct: 632 LAKGYEESGYLKSALRCSEDLSGIGI 657


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  290 bits (743), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 172/502 (34%), Positives = 261/502 (51%), Gaps = 7/502 (1%)

Query: 206 PDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALE 264
           P  K+ N ++ +L   N  SV A   Y M+ + G+ P++ T+  ++ + C   E+  A  
Sbjct: 171 PTFKSYNVVLDILVSANCPSVAANVFYEMLSK-GVIPTVYTFGVVMKALCMVNEVDNACS 229

Query: 265 LLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYS 324
           LL +M   GC PN V Y  LI   S+   + +A  L+ +M  +G      ++N +I G  
Sbjct: 230 LLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLC 289

Query: 325 EKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDII 384
               + E   L + M+ RG  P   TY +L+ GLC+ G+V +A+     +L K   P+ +
Sbjct: 290 RLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQ----VLLNKVPTPNDV 345

Query: 385 SYNTLLYGYCRSGNIGEA-FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
            +  L+ GY +SG + EA   L+D++      P V T+NTLI GLC+ G +  A  +  +
Sbjct: 346 HFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVND 405

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           M   G  P++ITYT +++G CK   L  A    NEM  KG + +   Y   +    K G 
Sbjct: 406 MSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGK 465

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
             +A  +  EM  KG  PD+ T+N L+ GLCK+   E+A  L R M+ DG I + +TY +
Sbjct: 466 VPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNT 525

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           +IHA L  G ++    L N+ML +G     +TY  LI A    G  E A   F EM  K 
Sbjct: 526 LIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKD 585

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
           + P+ I+ N LINGLCR+ ++  A  L  DM   G+ P+  TY  LIN  C  GN +EA 
Sbjct: 586 LVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAF 645

Query: 684 RLYKEMLDREIEPDYCTHSALL 705
            L+ ++    I+PD  T++ L+
Sbjct: 646 NLFNKLQAEGIQPDAITYNTLI 667



 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 150/484 (30%), Positives = 251/484 (51%), Gaps = 5/484 (1%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V+    +   M ++G +P+      +I  L       +A ++   M   G  P + T+N 
Sbjct: 224 VDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFND 283

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++   C+   + E  +L+  M  RG +PN +TY VL+ G  R G++++A+ L+    K+ 
Sbjct: 284 VIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLN---KVP 340

Query: 309 LKVSAHSYNPIICGYSEKGLLVEA-LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
                H +  +I GY + G L EA   L ++M+  G  P + T+N LI+GLCK G +  A
Sbjct: 341 TPNDVH-FTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSA 399

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
                +M      P++I+Y TLL G+C+   + EA  + +E+ ++     ++ YN L+  
Sbjct: 400 VDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRA 459

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           LC+ G +  A  +   M ++G  PD+ T+  ++ G CK+     A   + +ML  G+  +
Sbjct: 460 LCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIAN 519

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              Y T I   L+ G   EA +L  +ML +G P D ITYN L+   CKLG+ E+A  L  
Sbjct: 520 TVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFD 579

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
           +MV    +P +I+   +I+    +G +    +L  +M+ +GL+P +VTY  LI+     G
Sbjct: 580 EMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMG 639

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
            +  AF  F+++Q +GI+P+ ITYN LI   CR    D AY L +   E   +PN  T+ 
Sbjct: 640 NIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWY 699

Query: 668 ILIN 671
           IL++
Sbjct: 700 ILVS 703



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 120/354 (33%), Positives = 196/354 (55%), Gaps = 1/354 (0%)

Query: 183 YTKKSMVEQC-LLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKP 241
           Y K   +++    +++KM++NG  PDV   N +I  L   G    A ++   M   G  P
Sbjct: 354 YVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTP 413

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
           +++TY T+LD FCK+ +++EA  +L EM  +G   N + YNVL+    +NG++ +A  ++
Sbjct: 414 NLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDML 473

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
            +M   G K    ++N +I G  +     +AL L  +M+  GV     TYN LI+   + 
Sbjct: 474 GEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRG 533

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           G + +A     +ML +    D I+YN L+  +C+ G   +A  LFDE+  ++LVP+ ++ 
Sbjct: 534 GAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISC 593

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           N LI+GLCR G +  A +L  +MI++G+ PDV+TY  ++NG CKMGN+  A   FN++  
Sbjct: 594 NLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQA 653

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
           +G+QPD   Y T I    + G   +AY L    +   F P+ +T+ +LV    K
Sbjct: 654 EGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIK 707



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/347 (33%), Positives = 186/347 (53%), Gaps = 14/347 (4%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G + D F F T++  L + GL+ SA   V+ V  ++ +G    LI               
Sbjct: 375 GCRPDVFTFNTLIHGLCKKGLMGSA---VDMVNDMSANGCTPNLI-----------TYTT 420

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL  + KK+ +E+   V N+M   G   ++   N +++ L  NG   KA ++   M + G
Sbjct: 421 LLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKG 480

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
            KP I T+NT++   CK    ++AL L  +M   G   N VTYN LI  F R G +++A 
Sbjct: 481 CKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEAL 540

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L+ DML  G  +   +YN +I  + + G   +AL L +EMV + + P+  + N+LI GL
Sbjct: 541 KLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGL 600

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C+ G+V +A     +M+ + + PD+++YN+L+ G C+ GNI EAF LF++L++  + P  
Sbjct: 601 CRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDA 660

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
           +TYNTLI   CR G  + A  L    +    +P+ +T+ I+V+   K
Sbjct: 661 ITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIK 707



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 172/347 (49%), Gaps = 5/347 (1%)

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           P   SYN +L     +     A  +F E+ S+ ++PTV T+  ++  LC   +++ A  L
Sbjct: 171 PTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSL 230

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
             +M   G +P+ + Y  +++   K   ++ A +   EM   G  PD   +   I G  +
Sbjct: 231 LRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCR 290

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
           L    E  +L + ML +GF P+ ITY VL++GLC++G ++EA  LL K+      P+ + 
Sbjct: 291 LNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVP----TPNDVH 346

Query: 561 YTSIIHASLEMGDLRRGRD-LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
           +T +I+  ++ G L      L++ M++ G  P + T+  LIH    +G +  A    ++M
Sbjct: 347 FTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDM 406

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
              G  PN+ITY  L++G C+  ++++A  +  +M  +G   N   Y +L+   C  G  
Sbjct: 407 SANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKV 466

Query: 680 QEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
            +AL +  EM D+  +PD  T + L+      D K  A+     + L
Sbjct: 467 PKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLL 513


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 161/533 (30%), Positives = 274/533 (51%), Gaps = 34/533 (6%)

Query: 206 PDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALE 264
           P  K+ N ++++L   N   V A   Y M+    I P++ T+  ++ +FC   E+  AL 
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSR-KIPPTLFTFGVVMKAFCAVNEIDSALS 238

Query: 265 LLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYS 324
           LL +M   GC PN V Y  LI   S+   + +A  L+ +M  +G    A ++N +I G  
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298

Query: 325 EKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK------- 377
           +   + EA  +   M+ RG AP   TY  L+ GLCK GRV  A+  F+ + +        
Sbjct: 299 KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNT 358

Query: 378 -------------------------NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
                                     ++PD+ +YN+L+YGY + G +G A  +  ++R++
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
              P V +Y  L+DG C+ G ++ A  +   M   G+ P+ + +  +++  CK   +  A
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 478

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
            E F EM RKG +PD + + + I+G  ++ +   A  L  +M+++G   + +TYN L++ 
Sbjct: 479 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINA 538

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
             + G ++EA +L+ +MV  G   D ITY S+I      G++ + R LF  MLR G +P+
Sbjct: 539 FLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPS 598

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
            ++  +LI+     G +E A  +  EM ++G  P+++T+N+LINGLCR  RI+    +F 
Sbjct: 599 NISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFR 658

Query: 653 DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            ++ EGI P+  T+  L++  C  G   +A  L  E ++    P++ T S LL
Sbjct: 659 KLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILL 711



 Score =  268 bits (686), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 164/496 (33%), Positives = 259/496 (52%), Gaps = 9/496 (1%)

Query: 215 IKVLRDNGFSVKAREVYRMMGE----FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQ 270
           I ++RD   +    +  R+M E    +  +P+  +YN +L+        + A  + ++M 
Sbjct: 150 ISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDML 209

Query: 271 GRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLV 330
            R   P   T+ V++  F    E++ A  L+RDM K G   ++  Y  +I   S+   + 
Sbjct: 210 SRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVN 269

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
           EAL L EEM   G  P   T+N +I GLCK+ R+++A      ML +   PD I+Y  L+
Sbjct: 270 EALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLM 329

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ-GI 449
            G C+ G +  A  LF  +      P +V +NTLI G   +G L+ A+ +  +M+   GI
Sbjct: 330 NGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGI 385

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
           +PDV TY  ++ G  K G + +A E  ++M  KG +P+ ++YT  + G  KLG   EAY 
Sbjct: 386 VPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYN 445

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           +  EM A G  P+ + +N L+   CK   + EA E+ R+M   G  PD  T+ S+I    
Sbjct: 446 VLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLC 505

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
           E+ +++    L  +M+ +G+    VTY  LI+A   RG ++ A    +EM  +G   + I
Sbjct: 506 EVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEI 565

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           TYN+LI GLCR   +D+A  LF  M  +G  P+  +  ILIN  C +G  +EA+   KEM
Sbjct: 566 TYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEM 625

Query: 690 LDREIEPDYCTHSALL 705
           + R   PD  T ++L+
Sbjct: 626 VLRGSTPDIVTFNSLI 641



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 138/465 (29%), Positives = 244/465 (52%), Gaps = 7/465 (1%)

Query: 184 TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRII-KVLRDNGFSVKAREVYRMMGEFGIKPS 242
           +K + V + L +  +M   G +PD +  N +I  + + +  +  A+ V RM+   G  P 
Sbjct: 263 SKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIR-GFAPD 321

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            +TY  +++  CK G +  A +L + +      P  V +N LI GF  +G L+ A+ ++ 
Sbjct: 322 DITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLS 377

Query: 303 DML-KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
           DM+   G+     +YN +I GY ++GL+  AL +  +M  +G  P + +Y IL+ G CK 
Sbjct: 378 DMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKL 437

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           G++ +A +   EM    + P+ + +N L+  +C+   I EA  +F E+  +   P V T+
Sbjct: 438 GKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTF 497

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           N+LI GLC   +++ A  L  +MI++G++ + +TY  ++N   + G +  AR+  NEM+ 
Sbjct: 498 NSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVF 557

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
           +G   D   Y + I G  + G+  +A  L E+ML  G  P  I+ N+L++GLC+ G +EE
Sbjct: 558 QGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEE 617

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A E  ++MV  G  PD +T+ S+I+     G +  G  +F  +  +G+ P  VT+  L+ 
Sbjct: 618 AVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
                G +  A +   E    G  PN  T++ L+  +     +D+
Sbjct: 678 WLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 121/374 (32%), Positives = 212/374 (56%), Gaps = 1/374 (0%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYR-MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALE 264
           P++   N +I     +G    A+ V   M+  +GI P + TYN+++  + KEG +  ALE
Sbjct: 351 PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALE 410

Query: 265 LLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYS 324
           +L +M+ +GC PN  +Y +L+ GF + G++++A  ++ +M   GLK +   +N +I  + 
Sbjct: 411 VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFC 470

Query: 325 EKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDII 384
           ++  + EA+ +  EM  +G  P + T+N LI GLC+   +  A     +M+ + V+ + +
Sbjct: 471 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV 530

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
           +YNTL+  + R G I EA  L +E+  +      +TYN+LI GLCR G+++ A+ L E M
Sbjct: 531 TYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
           +  G  P  I+  I++NG C+ G +  A EF  EM+ +G  PD   + + I G  + G  
Sbjct: 591 LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 650

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
            +   +  ++ A+G PPD +T+N L+  LCK G + +A  LL + + DGF+P+H T++ +
Sbjct: 651 EDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSIL 710

Query: 565 IHASLEMGDLRRGR 578
           + + +    L R R
Sbjct: 711 LQSIIPQETLDRRR 724



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/450 (26%), Positives = 213/450 (47%), Gaps = 7/450 (1%)

Query: 259 MQEALELL-WEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
           +  ++EL  W     G   +   Y VLI     NGE +    L+  M   G+      + 
Sbjct: 91  VSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFI 150

Query: 318 PIICGYSEKGLLVEALNLEEEMV-TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
            I+  Y + G   +   L  EM       PT  +YN+++  L        A + F++ML 
Sbjct: 151 SIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLS 210

Query: 377 KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
           + + P + ++  ++  +C    I  A  L  ++     VP  V Y TLI  L +   +  
Sbjct: 211 RKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNE 270

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
           A QL E M   G +PD  T+  ++ G CK   ++ A +  N ML +G  PD   Y   + 
Sbjct: 271 ALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMN 330

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD-GFI 555
           G  K+G    A    +++  +   P+++ +N L+HG    G L++A  +L  MV   G +
Sbjct: 331 GLCKIGRVDAA----KDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIV 386

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           PD  TY S+I+   + G +    ++ ++M  KG  P + +YT+L+      G+++ A+  
Sbjct: 387 PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
            +EM   G++PN + +N LI+  C+  RI +A  +F +M  +G  P+ YT+  LI+  C 
Sbjct: 447 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 506

Query: 676 AGNWQEALRLYKEMLDREIEPDYCTHSALL 705
               + AL L ++M+   +  +  T++ L+
Sbjct: 507 VDEIKHALWLLRDMISEGVVANTVTYNTLI 536



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/369 (30%), Positives = 195/369 (52%), Gaps = 1/369 (0%)

Query: 173 IKILDLLLLIYTKKSMVEQCLLVFNKMLRN-GLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           I I + L+  +     ++    V + M+ + G++PDV   N +I      G    A EV 
Sbjct: 353 IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVL 412

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M   G KP++ +Y  ++D FCK G++ EA  +L EM   G  PN V +N LI+ F + 
Sbjct: 413 HDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKE 472

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
             + +A  + R+M + G K   +++N +I G  E   +  AL L  +M++ GV     TY
Sbjct: 473 HRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTY 532

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           N LI    + G + +AR    EM+ +    D I+YN+L+ G CR+G + +A  LF+++  
Sbjct: 533 NTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLR 592

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
               P+ ++ N LI+GLCR G +E A + ++ M+ +G  PD++T+  ++NG C+ G +  
Sbjct: 593 DGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIED 652

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
               F ++  +G+ PD   + T ++   K G   +A  L +E +  GF P+  T+++L+ 
Sbjct: 653 GLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQ 712

Query: 532 GLCKLGSLE 540
            +    +L+
Sbjct: 713 SIIPQETLD 721



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 98/295 (33%), Positives = 162/295 (54%), Gaps = 1/295 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K   +++   V N+M  +GL P+    N +I          +A E++R M   G KP 
Sbjct: 434 FCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPD 493

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           + T+N+++   C+  E++ AL LL +M   G   N VTYN LI  F R GE+++AR L+ 
Sbjct: 494 VYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVN 553

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M+  G  +   +YN +I G    G + +A +L E+M+  G AP+  + NILI GLC+ G
Sbjct: 554 EMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSG 613

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            V +A     EM+ +   PDI+++N+L+ G CR+G I +   +F +L++  + P  VT+N
Sbjct: 614 MVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFN 673

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           TL+  LC+ G +  A  L +  I  G +P+  T++I++        L   R F+N
Sbjct: 674 TLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLD-RRRFYN 727


>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
 gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 186/620 (30%), Positives = 302/620 (48%), Gaps = 74/620 (11%)

Query: 157 GILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK 216
           G+LD++   G+    ++      ++ Y +   VE+   ++  M+RNG+L DV   + ++ 
Sbjct: 225 GVLDMMKEAGVDP--NVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVA 282

Query: 217 VL-RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGC- 274
            L RD  FS +A  ++R M + G  P+ VTY T++DS  K G  +E L LL EM  RG  
Sbjct: 283 GLCRDGRFS-EAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVV 341

Query: 275 ----------------------------------SPNGVTYNVLITGFSRNGELEQARGL 300
                                             SPNGVTY VLI    +   +++A  +
Sbjct: 342 MDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQV 401

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           + +M +  +  +  +++ +I G+ ++GLL +A   +  M  RG+ P + TY  LI G  K
Sbjct: 402 LLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFK 461

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
           +     A   + +ML + V  +    ++L+ G  ++G I EA  LF +     L    V 
Sbjct: 462 FQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVN 521

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y TLIDGL + GD+  A +  + ++++ +LPD + Y + +N  C +G    A+ F  EM 
Sbjct: 522 YTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMR 581

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
             GL+PD+  Y T I    + G+T++A +L  EM      P+LITYN LV GL   G++E
Sbjct: 582 NMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVE 641

Query: 541 EANELLRKMVGDGFIPDHITYTSI------------------------IHASLEM----- 571
           +A  LL +MV  GF P  +T+  +                        +HA + +     
Sbjct: 642 KAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLL 701

Query: 572 ------GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
                 G  R+   +   ML  G++P  +T+  LI  H     L+ AF  +++M  + I 
Sbjct: 702 QVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNIS 761

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           PN+ T+N L+ GL  + RI +A  + I+ME+ G+ PN  TY IL   +    N  EA+RL
Sbjct: 762 PNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRL 821

Query: 686 YKEMLDREIEPDYCTHSALL 705
           Y EM+ +   P   T++AL+
Sbjct: 822 YCEMVGKGFVPKVSTYNALI 841



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 149/483 (30%), Positives = 234/483 (48%), Gaps = 3/483 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
            EQ LL   +M    + P+V   + +I      G   KA E  RMM E GI P++VTY T
Sbjct: 398 AEQVLL---EMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGT 454

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++D F K      ALE+  +M   G   N    + L+ G  +NG++E+A  L +D    G
Sbjct: 455 LIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSG 514

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           L +   +Y  +I G  + G +  A    +E++ R + P    YN+ I  LC  G+  +A+
Sbjct: 515 LSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAK 574

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               EM    + PD  +YNT++  +CR G   +A  L  E++  ++ P ++TYNTL+ GL
Sbjct: 575 SFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGL 634

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
              G +E A+ L   M++ G  P  +T+  ++    +   L +  +    M+  GL  D 
Sbjct: 635 FGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADI 694

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             Y T +      G T +A  + EEML  G  PD IT+N L+ G CK   L+ A     +
Sbjct: 695 TVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQ 754

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M+     P+  T+ +++     +G +     +   M + GL P  +TY +L   H  +  
Sbjct: 755 MLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSN 814

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
              A   + EM  KG  P V TYNALI+   +   + QA  LF DM++ G+ P   TY I
Sbjct: 815 KVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDI 874

Query: 669 LIN 671
           L++
Sbjct: 875 LVS 877



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 161/594 (27%), Positives = 275/594 (46%), Gaps = 41/594 (6%)

Query: 164 GGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGF 223
           GGG+ + + +   + L+  Y +       L V ++M   GL  DV   N ++      G 
Sbjct: 161 GGGIHA-LDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQ 219

Query: 224 SVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNV 283
              AR V  MM E G+ P++ TY   +  +C+   ++EA +L   M   G   + VT + 
Sbjct: 220 VDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSA 279

Query: 284 LITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG 343
           L+ G  R+G   +A  L R+M K+G   +  +Y  +I   ++ G   E L+L  EMV+RG
Sbjct: 280 LVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRG 339

Query: 344 VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF 403
           V   L TY  L+  L K G+  + +      L  N+ P+ ++Y  L+   C++ N+ EA 
Sbjct: 340 VVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAE 399

Query: 404 LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
            +  E+  +++ P VVT++++I+G  + G L+ A + K  M  +GI P+V+TY  +++G 
Sbjct: 400 QVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGF 459

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
            K      A E +++ML +G++ ++F   + + G  + G   EA  L ++    G   D 
Sbjct: 460 FKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDH 519

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
           + Y  L+ GL K G +  A +  ++++    +PD + Y   I+    +G  +  +     
Sbjct: 520 VNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTE 579

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           M   GL P   TY  +I +H  +G    A     EM++  I+PN+ITYN L+ GL     
Sbjct: 580 MRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGA 639

Query: 644 IDQAYGLFIDMEEEGILPNKYT-----------------------------------YTI 668
           +++A  L  +M   G  P+  T                                   Y  
Sbjct: 640 VEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNT 699

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL-----KQLDKDYKVHA 717
           L+   C  G  ++A  + +EML   I PD  T +AL+L       LD  +  +A
Sbjct: 700 LLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYA 753



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 148/535 (27%), Positives = 244/535 (45%), Gaps = 39/535 (7%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P     N ++  L D+     A  V   M + G+    VT NT+L   C+ G++ +A   
Sbjct: 101 PTTVAYNILLAALSDHA---HAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQV-DAAAA 156

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           L +  G   + + + +N LI G+ R G+   A  +   M   GL +    YN ++ G+  
Sbjct: 157 LADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCR 216

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
            G +  A  + + M   GV P +ATY   I   C+   V +A   +  M+R  V+ D+++
Sbjct: 217 AGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVT 276

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
            + L+ G CR G   EA+ LF E+      P  VTY TLID L + G  +    L   M+
Sbjct: 277 LSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMV 336

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
           ++G++ D++TYT +++   K G     ++     L   L P+   YT  I    K  +  
Sbjct: 337 SRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVD 396

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           EA ++  EM  K   P+++T++ +++G  K G L++A E  R M   G  P+ +TY ++I
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLI 456

Query: 566 ---------HASLEM--------------------------GDLRRGRDLFNNMLRKGLS 590
                     A+LE+                          G +     LF +    GLS
Sbjct: 457 DGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLS 516

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
              V YT LI      G +  AF +  E+  + + P+ + YN  IN LC L +  +A   
Sbjct: 517 LDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSF 576

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             +M   G+ P++ TY  +I  +C  G   +AL+L  EM    I+P+  T++ L+
Sbjct: 577 LTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLV 631



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 117/427 (27%), Positives = 190/427 (44%), Gaps = 35/427 (8%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           +  L V++ ML  G+  +    + ++  LR NG   +A  +++     G+    V Y T+
Sbjct: 466 DAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTL 525

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           +D   K G+M  A +   E+  R   P+ V YNV I      G+ ++A+  + +M  +GL
Sbjct: 526 IDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGL 585

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
           K    +YN +I  +  KG   +AL L  EM    + P L TYN L+ GL   G V  A++
Sbjct: 586 KPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKY 645

Query: 370 RFFEMLRKNVIP-----------------------------------DIISYNTLLYGYC 394
              EM+     P                                   DI  YNTLL   C
Sbjct: 646 LLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLC 705

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
             G   +A ++ +E+    + P  +T+N LI G C+   L+ A      M++Q I P++ 
Sbjct: 706 YHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIA 765

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
           T+  ++ G   +G +  A     EM + GL+P+   Y     G  K  +  EA RL  EM
Sbjct: 766 TFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEM 825

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
           + KGF P + TYN L+    K G + +A EL + M   G  P   TY  ++    ++   
Sbjct: 826 VGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWYDLARE 885

Query: 575 RRGRDLF 581
           ++ ++ +
Sbjct: 886 QKSQNTY 892



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 162/385 (42%), Gaps = 61/385 (15%)

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL--------------VPTV--------- 418
           D  S N LLY +CR   +  A  L    R   +               P V         
Sbjct: 72  DPASLNALLYSHCRLRLLRPAIALLRSSRPTTVAYNILLAALSDHAHAPAVLAEMCKRGV 131

Query: 419 ----VTYNTLIDGLCRYGDLEVAQQL---------------------------------- 440
               VT NTL+ GLCR G ++ A  L                                  
Sbjct: 132 PFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSV 191

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
            + M  QG+  DV+ Y  +V G C+ G +  AR   + M   G+ P+   YT  I    +
Sbjct: 192 ADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCR 251

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
                EA+ L E M+  G   D++T + LV GLC+ G   EA  L R+M   G  P+H+T
Sbjct: 252 TKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVT 311

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           Y ++I +  + G  +    L   M+ +G+   LVTYT L+     +G+ +          
Sbjct: 312 YCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFAL 371

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
              + PN +TY  LI+ LC+   +D+A  + ++MEE+ I PN  T++ +IN     G   
Sbjct: 372 SDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLD 431

Query: 681 EALRLYKEMLDREIEPDYCTHSALL 705
           +A    + M +R I P+  T+  L+
Sbjct: 432 KATEYKRMMKERGINPNVVTYGTLI 456



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 112/223 (50%), Gaps = 15/223 (6%)

Query: 158 ILDV---LIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRI 214
           ILD+   ++  GL +   I + + LL +     M  +  +V  +ML +G+ PD    N +
Sbjct: 678 ILDIHEWMMNAGLHA--DITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNAL 735

Query: 215 I-----KVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM 269
           I         DN F+  A+ +++      I P+I T+NT+L      G + EA  +L EM
Sbjct: 736 ILGHCKSSHLDNAFATYAQMLHQ-----NISPNIATFNTLLGGLESVGRIGEAGTVLIEM 790

Query: 270 QGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLL 329
           +  G  PN +TY++L TG  +     +A  L  +M+  G      +YN +I  +++ G++
Sbjct: 791 EKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMM 850

Query: 330 VEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
            +A  L ++M  RGV PT  TY+IL+ G     R   +++ +F
Sbjct: 851 TQAKELFKDMQKRGVHPTSCTYDILVSGWYDLAREQKSQNTYF 893



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 88/217 (40%), Gaps = 36/217 (16%)

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII-------HASLEMG 572
           P D  + N L++  C+L  L  A  LLR        P  + Y  ++       HA   + 
Sbjct: 70  PADPASLNALLYSHCRLRLLRPAIALLRSSR-----PTTVAYNILLAALSDHAHAPAVLA 124

Query: 573 DL-RRG--------RDLFNNMLRKGL---------------SPTLVTYTVLIHAHAARGR 608
           ++ +RG          L   + R G                +  ++ +  LI  +   G 
Sbjct: 125 EMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIAGYCRVGD 184

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
              A      M  +G+  +V+ YN L+ G CR  ++D A G+   M+E G+ PN  TYT 
Sbjct: 185 TPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTP 244

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            I   C     +EA  LY+ M+   +  D  T SAL+
Sbjct: 245 FIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALV 281


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 167/508 (32%), Positives = 262/508 (51%), Gaps = 1/508 (0%)

Query: 194 LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
           +V ++M+  G+ PDV   N +IK L        A  +   MG +G+ P   T+ T++  F
Sbjct: 197 IVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGF 256

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
            +EG M  AL +  +M   GC  + VT NVL+ G+ + G +E+    I +M   G +   
Sbjct: 257 IEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDR 316

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
            ++N ++ G    G +  AL + + M+  G  P + TYN LI+GLCK G V +A     +
Sbjct: 317 FTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQ 376

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M+ ++  P+ ++YNTL+   C+   + EA  L   L S+ ++P V T+N+LI GLC   +
Sbjct: 377 MILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNN 436

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
             +A +L E M  +G  PD  TY ++++  C  G L  A     EM   G   +   Y T
Sbjct: 437 HRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNT 496

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            I G  K     EA  + +EM  +G   +++TYN L+ GLCK   +EEA +L+ +M+ +G
Sbjct: 497 LIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEG 556

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
             PD  TY S++      GD+++  D+   M   G  P  VTY  LI   +  GR+ELA 
Sbjct: 557 LKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELAS 616

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
                +Q+KG+     TYN +I  L R +R  +A  LF +M E+G  P+  TY ++    
Sbjct: 617 RLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGL 676

Query: 674 CNAGN-WQEALRLYKEMLDREIEPDYCT 700
           C+ G    EA+    EM D+   PD+ +
Sbjct: 677 CSGGGPIGEAVDFLVEMTDKGFLPDFSS 704



 Score =  275 bits (703), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 161/468 (34%), Positives = 251/468 (53%), Gaps = 5/468 (1%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PS V Y  +L    K+G       +L EM+  GC     T+ +LI  +++    ++A  +
Sbjct: 103 PSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAV 162

Query: 301 IRDMLK-LGLKVSAHSYNPI--ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
           +  M +  GLK+ A +YN +  +     K  LVE +N    MV+RG+ P + T+NILI  
Sbjct: 163 VDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVN--SRMVSRGIKPDVTTFNILIKA 220

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           LC+  ++  A     EM    + PD  ++ TL+ G+   GN+  A  + +++ +     +
Sbjct: 221 LCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSS 280

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
            VT N L+ G C+ G +E      + M N+G  PD  T+  +VNG C++G++  A E  +
Sbjct: 281 NVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILD 340

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            ML++G  PD F Y + I G  KLG+  EA  +  +M+ + F P+ +TYN L+  LCK  
Sbjct: 341 VMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKEN 400

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            +EEA EL R +   G +PD  T+ S+I       + R   +LF  M  KG  P   TY 
Sbjct: 401 QVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYN 460

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           +LI +  +RGRLE A     EM+  G   NV+TYN LI+G C+ +RI++A  +F +ME +
Sbjct: 461 MLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQ 520

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           GI  N  TY  LI+  C     +EA +L  +ML   ++PD  T+++LL
Sbjct: 521 GISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLL 568



 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 165/562 (29%), Positives = 276/562 (49%), Gaps = 15/562 (2%)

Query: 114 VETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSI 173
           +E + G+K D F +  +L +L++   L+        V  VN       ++  G+   V+ 
Sbjct: 166 MEEEFGLKLDAFTYNFLLNVLVDGNKLK-------LVEIVNSR-----MVSRGIKPDVTT 213

Query: 174 KILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRM 233
              ++L+    +   +   +L+  +M   GL PD K    +++   + G    A  +   
Sbjct: 214 --FNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQ 271

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M   G   S VT N ++  +CKEG ++E L  + EM   G  P+  T+N L+ G  R G 
Sbjct: 272 MVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGH 331

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           ++ A  ++  ML+ G      +YN +I G  + G + EA+ +  +M+ R  +P   TYN 
Sbjct: 332 VKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNT 391

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           LI  LCK  +V +A      +  K ++PD+ ++N+L+ G C + N   A  LF+E++++ 
Sbjct: 392 LISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKG 451

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
             P   TYN LID LC  G LE A  L + M + G   +V+TY  +++G CK   +  A 
Sbjct: 452 CHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAE 511

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
           E F+EM  +G+  +   Y T I G  K     EA +L ++ML +G  PD  TYN L+   
Sbjct: 512 EIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYF 571

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
           C+ G +++A ++++ M  +G  PD +TY ++I    + G +     L   +  KG+    
Sbjct: 572 CRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAP 631

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR-LRRIDQAYGLFI 652
            TY  +I A     R   A   F EM  KG  P+ +TY  +  GLC     I +A    +
Sbjct: 632 QTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLV 691

Query: 653 DMEEEGILPNKYTYTILINENC 674
           +M ++G LP+  ++ +L    C
Sbjct: 692 EMTDKGFLPDFSSFLMLAEGLC 713



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 159/539 (29%), Positives = 241/539 (44%), Gaps = 88/539 (16%)

Query: 75  NNRWVSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEIL 134
           N+R VS   +  V+   +L++ L R  +  R A+     + +  G+  DE  F T+++  
Sbjct: 199 NSRMVSRGIKPDVTTFNILIKALCRAHQI-RPAILMMEEMGSY-GLSPDEKTFTTLMQGF 256

Query: 135 IESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLL 194
           IE G +  A  + E +V             G  SS V++ +L   +  Y K+  +E+ L 
Sbjct: 257 IEEGNMNGALRIREQMVA-----------AGCPSSNVTVNVL---VHGYCKEGRIEEVLS 302

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
             ++M   G  PD    N ++  L   G    A E+  +M + G  P I TYN+++   C
Sbjct: 303 FIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLC 362

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K GE++EA+E+L +M  R  SPN VTYN LI+   +  ++E+A  L R +   G+     
Sbjct: 363 KLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVC 422

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           ++N +I G         A+ L EEM T+G  P   TYN+LI  LC  GR+ +A     EM
Sbjct: 423 TFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEM 482

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC----- 429
                  ++++YNTL+ G+C++  I EA  +FDE+  + +   VVTYNTLIDGLC     
Sbjct: 483 ESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRV 542

Query: 430 ------------------------------RYGDLEVAQQLKENMINQGILPDVITYTIM 459
                                         R GD++ A  + + M + G  PD +TY  +
Sbjct: 543 EEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTL 602

Query: 460 VNGSCKMGNLSMA---------------------------RE--------FFNEMLRKGL 484
           + G  K G + +A                           RE         F EM+ KG 
Sbjct: 603 ILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGD 662

Query: 485 QPDRFAYTTQIAGELKLGDT-SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
            PD   Y     G    G    EA     EM  KGF PD  ++ +L  GLC L S+E+ 
Sbjct: 663 PPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLCAL-SMEDT 720



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 161/365 (44%), Gaps = 38/365 (10%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+    K++ VE+   +   +   G+LPDV   N +I+ L        A E++  M   G
Sbjct: 392 LISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKG 451

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
             P   TYN ++DS C  G ++EAL LL EM+  GCS N VTYN LI GF +N  +E+A 
Sbjct: 452 CHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAE 511

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            +  +M   G+  +  +YN +I G  +   + EA  L ++M+  G+ P   TYN L+   
Sbjct: 512 EIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYF 571

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI------------------- 399
           C+ G +  A      M      PD ++Y TL+ G  ++G +                   
Sbjct: 572 CRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAP 631

Query: 400 ----------------GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG-DLEVAQQLKE 442
                            EA  LF E+  +   P  VTY  +  GLC  G  +  A     
Sbjct: 632 QTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLV 691

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            M ++G LPD  ++ ++  G C +       +  N ++++    D  +  + I G LK+ 
Sbjct: 692 EMTDKGFLPDFSSFLMLAEGLCALSMEDTLIKLVNRVMKQANFSD--SEVSMIMGFLKIR 749

Query: 503 DTSEA 507
              +A
Sbjct: 750 KFQDA 754



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/322 (26%), Positives = 154/322 (47%), Gaps = 11/322 (3%)

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
           +  N VP+ V Y  ++  L + G     +++ + M + G      T+ I++    K    
Sbjct: 97  KQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELF 156

Query: 470 SMAREFFNEMLRK-GLQPDRFAYTTQI-----AGELKLGDTSEAYRLQEEMLAKGFPPDL 523
             A    + M  + GL+ D F Y   +       +LKL +      +   M+++G  PD+
Sbjct: 157 DEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEI-----VNSRMVSRGIKPDV 211

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
            T+N+L+  LC+   +  A  ++ +M   G  PD  T+T+++   +E G++     +   
Sbjct: 212 TTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQ 271

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           M+  G   + VT  VL+H +   GR+E    +  EM  +G RP+  T+N+L+NGLCR+  
Sbjct: 272 MVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGH 331

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSA 703
           +  A  +   M +EG  P+ +TY  LI   C  G  +EA+ +  +M+ R+  P+  T++ 
Sbjct: 332 VKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNT 391

Query: 704 LLLKQLDKDYKVHAVEYLESLT 725
           L+     ++    A E    LT
Sbjct: 392 LISTLCKENQVEEATELARVLT 413



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/314 (25%), Positives = 129/314 (41%), Gaps = 2/314 (0%)

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ-GILPDVITYTIMVNGSCKMGNLSMAR 473
           +P   T   L D L R  D +    L +    Q   +P  + Y  ++    K G+    R
Sbjct: 66  LPQNFTPKQLRDALRRQSDEDSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMR 125

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK-GFPPDLITYNVLVHG 532
               EM   G +  R  +   I    K     EA  + + M  + G   D  TYN L++ 
Sbjct: 126 RVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNV 185

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           L     L+    +  +MV  G  PD  T+  +I A      +R    +   M   GLSP 
Sbjct: 186 LVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPD 245

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
             T+T L+      G +  A     +M   G   + +T N L++G C+  RI++      
Sbjct: 246 EKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFID 305

Query: 653 DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
           +M  EG  P+++T+  L+N  C  G+ + AL +   ML    +PD  T+++L+       
Sbjct: 306 EMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLG 365

Query: 713 YKVHAVEYLESLTL 726
               AVE L  + L
Sbjct: 366 EVEEAVEILNQMIL 379


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 159/442 (35%), Positives = 245/442 (55%), Gaps = 35/442 (7%)

Query: 173 IKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR 232
           I+  + +L ++ K +  E   +++ +M R  +   V   N +I VL   G   KA++   
Sbjct: 201 IETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIG 260

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
            M   G+KP++VTYNT++  +C  G ++ A  +L  M+ RG  P+  TY  LI+G  + G
Sbjct: 261 SMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGG 320

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
           +LE+A G++  M ++GL  +A +YN +I GY  KG LV+A    +EMV R + PT++TYN
Sbjct: 321 KLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYN 380

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
           +LI+ L   G++ +A     +M    ++PD I+YN L+ GYCR GN  +AF L DE+ S+
Sbjct: 381 LLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISK 440

Query: 413 NLVPTVVTY-----------------------------------NTLIDGLCRYGDLEVA 437
            + PT+VTY                                   N LIDG C  G+L+ A
Sbjct: 441 GIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRA 500

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
             L + M  + I+PD +TY  ++ G C+ G +  ARE   EM R+G++PD  +Y T I+G
Sbjct: 501 FALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISG 560

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
             K GD ++A+ +++EML+ GF P L+TYN L+ GLCK    + A ELL++MV  G  PD
Sbjct: 561 YSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPD 620

Query: 558 HITYTSIIHASLEMGDLRRGRD 579
             TY S+I    ++ D     D
Sbjct: 621 DSTYFSLIEGIGKVDDSSEASD 642



 Score =  286 bits (732), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 162/456 (35%), Positives = 246/456 (53%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A E + MM E G+ P I T+N ML  F K  + +    L  EM          T+N++I 
Sbjct: 185 AFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMIN 244

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
              + G+L++A+  I  M  LG+K +  +YN +I GY  +G +  A  + + M  RGV P
Sbjct: 245 VLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEP 304

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
              TY  LI G+CK G++ +A     +M    ++P  ++YNTL+ GYC  G++ +AF   
Sbjct: 305 DSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYR 364

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
           DE+  R ++PTV TYN LI  L   G ++ A  + ++M + GI+PD ITY I++NG C+ 
Sbjct: 365 DEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRC 424

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           GN   A    +EM+ KG+QP    YT+ I    K      A  L E+++ +G  PDLI +
Sbjct: 425 GNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMF 484

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           N L+ G C  G+L+ A  LL++M     +PD +TY +++      G +   R+L   M R
Sbjct: 485 NALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKR 544

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
           +G+ P  ++Y  LI  ++ RG +  AF    EM   G  P ++TYNALI GLC+ ++ D 
Sbjct: 545 RGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDL 604

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
           A  L  +M  +GI P+  TY  LI       +  EA
Sbjct: 605 AEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEA 640



 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 170/564 (30%), Positives = 288/564 (51%), Gaps = 11/564 (1%)

Query: 90  PELLVRVLNRIREKPRIALRFFRWVETQPGVKR-DEFVFCTILEILIESGLLRSAYWVVE 148
           P L+   L  + +K  +AL+F     T  G K  D    C  + ++  S   +S   +++
Sbjct: 82  PSLISATLLSLHKKSDLALQFV----THIGFKGLDIKTKCLAVAVVSRSPSPKSTLHLLK 137

Query: 149 TVVCVNMHGILDV-----LIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNG 203
             +   + G+ DV     +    L +  SI + D+L+    +    +     F+ M   G
Sbjct: 138 QTIESRVAGVKDVFHELAITRDRLGTKSSI-VFDMLIRACCELKRGDDAFECFDMMKEKG 196

Query: 204 LLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEAL 263
           ++P ++  N ++ +      +     +Y  M    IK ++ T+N M++  CKEG++++A 
Sbjct: 197 VVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAK 256

Query: 264 ELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGY 323
           + +  M+  G  PN VTYN +I G+   G +E AR ++  M   G++  +++Y  +I G 
Sbjct: 257 DFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGM 316

Query: 324 SEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
            + G L EA  + E+M   G+ PT  TYN LI G C  G +  A     EM+R+ ++P +
Sbjct: 317 CKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTV 376

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
            +YN L++     G + EA  +  ++    +VP  +TYN LI+G CR G+ + A  L + 
Sbjct: 377 STYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDE 436

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           MI++GI P ++TYT ++    K   +  A + F +++R+G  PD   +   I G    G+
Sbjct: 437 MISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGN 496

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
              A+ L +EM  +   PD +TYN L+ G C+ G +EEA ELL++M   G  PDHI+Y +
Sbjct: 497 LDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNT 556

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           +I    + GD+     + + ML  G +PTL+TY  LI       + +LA     EM  KG
Sbjct: 557 LISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKG 616

Query: 624 IRPNVITYNALINGLCRLRRIDQA 647
           I P+  TY +LI G+ ++    +A
Sbjct: 617 ITPDDSTYFSLIEGIGKVDDSSEA 640



 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 150/469 (31%), Positives = 245/469 (52%), Gaps = 1/469 (0%)

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G K SIV ++ ++ + C+     +A E    M+ +G  P   T+N +++ F +  + E 
Sbjct: 161 LGTKSSIV-FDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTET 219

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
              L  +M +L +K + +++N +I    ++G L +A +    M   GV P + TYN +I+
Sbjct: 220 VWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIH 279

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           G C  GRV  AR     M  + V PD  +Y +L+ G C+ G + EA  + ++++   L+P
Sbjct: 280 GYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLP 339

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
           T VTYNTLIDG C  GDL  A   ++ M+ + ILP V TY ++++     G +  A    
Sbjct: 340 TAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMI 399

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
            +M   G+ PD   Y   I G  + G+  +A+ L +EM++KG  P L+TY  L++ L K 
Sbjct: 400 KDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKR 459

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
             ++ A++L  K++ +G  PD I + ++I      G+L R   L   M ++ + P  VTY
Sbjct: 460 NRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTY 519

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
             L+      G++E A     EM+ +GIRP+ I+YN LI+G  +   I+ A+ +  +M  
Sbjct: 520 NTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLS 579

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            G  P   TY  LI   C       A  L KEM+ + I PD  T+ +L+
Sbjct: 580 IGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLI 628



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 173/381 (45%), Gaps = 37/381 (9%)

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGL-CKWGRVSDARHRFFEMLRKNVIPDII 384
           KGL ++   L   +V+R  +P  +T ++L   +  +   V D  H       +      I
Sbjct: 109 KGLDIKTKCLAVAVVSRSPSPK-STLHLLKQTIESRVAGVKDVFHELAITRDRLGTKSSI 167

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
            ++ L+   C      +AF  FD ++ + +VP + T+N ++    +    E    L   M
Sbjct: 168 VFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEM 227

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
               I   V T+ IM+N  CK G L  A++F   M   G++P+                 
Sbjct: 228 FRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPN----------------- 270

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
                             ++TYN ++HG C  G +E A  +L  M   G  PD  TY S+
Sbjct: 271 ------------------VVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSL 312

Query: 565 IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
           I    + G L     +   M   GL PT VTY  LI  +  +G L  AF Y  EM  + I
Sbjct: 313 ISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAI 372

Query: 625 RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
            P V TYN LI+ L    ++D+A G+  DM + GI+P+  TY ILIN  C  GN ++A  
Sbjct: 373 LPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFN 432

Query: 685 LYKEMLDREIEPDYCTHSALL 705
           L+ EM+ + I+P   T+++L+
Sbjct: 433 LHDEMISKGIQPTLVTYTSLI 453



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 102/201 (50%)

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
           I +++L+   C+L   ++A E    M   G +P   T+ +++   L++        L+  
Sbjct: 167 IVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAE 226

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           M R  +  T+ T+ ++I+     G+L+ A  +   M+  G++PNV+TYN +I+G C   R
Sbjct: 227 MFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGR 286

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSA 703
           ++ A  +   M+  G+ P+ YTY  LI+  C  G  +EA  + ++M +  + P   T++ 
Sbjct: 287 VEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNT 346

Query: 704 LLLKQLDKDYKVHAVEYLESL 724
           L+    +K   V A  Y + +
Sbjct: 347 LIDGYCNKGDLVKAFGYRDEM 367


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 152/484 (31%), Positives = 259/484 (53%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PSIV +  +L S  K       L L  +M   G  PN  T N+LI  F     +  A  +
Sbjct: 54  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 113

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  +LKLG +    ++  +I G   +G + EAL+L ++M+  G  P + TY  LI GLCK
Sbjct: 114 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 173

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G  S A      M + N  PD++ Y +++   C+   + EAF LF ++  + + P + T
Sbjct: 174 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 233

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y +L+  LC   + +    L   M+N  ILPDV+ ++ +V+  CK G ++ A E  + M+
Sbjct: 234 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 293

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           ++G++PD   YTT + G     +  EA ++ + M+ KGF PD+I+Y  L++G CK+  ++
Sbjct: 294 QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKID 353

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           +A  L  +M    +IPD  TY +++H    +G L+    LF+ M+ +G  P LVTY++L+
Sbjct: 354 KAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILL 413

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
            +      LE A      ++   + P++  YN +I+G+CR   ++ A  LF ++  +G+ 
Sbjct: 414 DSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLH 473

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
           P+ +TY I+I+  C  G   EA +L+ EM   +  PD CT++ +    L  +  + A++ 
Sbjct: 474 PSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQL 533

Query: 721 LESL 724
           LE +
Sbjct: 534 LEEM 537



 Score =  268 bits (686), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 154/524 (29%), Positives = 267/524 (50%), Gaps = 1/524 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           ++  L  FN++L     P + +  +++  +           +   M  FG+ P++ T N 
Sbjct: 37  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 96

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++SFC    +  A  +L ++   G  P+  T+  LI G    G++ +A  L   M+  G
Sbjct: 97  LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 156

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            + +  +Y  +I G  + G    A+ L   M      P +  Y  +I  LCK  +V++A 
Sbjct: 157 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 216

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
           + F +M+ + + PDI +Y +L++  C          L +++ +  ++P VV ++T++D L
Sbjct: 217 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 276

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G +  A ++ + MI +G+ PDV+TYT +++G C    +  A + F+ M+RKG  PD 
Sbjct: 277 CKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDV 336

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
            +YTT I G  K+    +A  L EEM  K + PD  TYN L+HGLC +G L++A  L  +
Sbjct: 337 ISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHE 396

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           MV  G +PD +TY+ ++ +  +   L     L   +    L+P +  Y ++I      G 
Sbjct: 397 MVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGE 456

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           LE A   FS +  KG+ P+V TYN +I+GLC+   +++A  LF++M+     P+  TY  
Sbjct: 457 LEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNT 516

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
           +            A++L +EML R    D  T + LL++ L  D
Sbjct: 517 IARGFLQNNETLRAIQLLEEMLARGFSADVST-TTLLVEMLSDD 559



 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 164/498 (32%), Positives = 249/498 (50%), Gaps = 12/498 (2%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV---LRDNGFSVKAREVYRMMG 235
           LL    K       L +  +M   G+ P+V   N +I     L   GF   A  V   + 
Sbjct: 62  LLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGF---AFSVLAKIL 118

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
           + G +P   T+ T++   C EG++ EAL L  +M   G  PN VTY  LI G  + G   
Sbjct: 119 KLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTS 178

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
            A  L+R M +   +     Y  II    +   + EA NL  +MV +G++P + TY  L+
Sbjct: 179 AAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLV 238

Query: 356 YGLC---KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
           + LC   +W  V+   +   +M+   ++PD++ ++T++   C+ G + EA  + D +  R
Sbjct: 239 HALCNLCEWKHVTTLLN---QMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQR 295

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
            + P VVTY TL+DG C   +++ A ++ + M+ +G  PDVI+YT ++NG CK+  +  A
Sbjct: 296 GVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKA 355

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
              F EM RK   PD   Y T + G   +G   +A  L  EM+A+G  PDL+TY++L+  
Sbjct: 356 MYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDS 415

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           LCK   LEEA  LL+ +      PD   Y  II      G+L   RDLF+N+  KGL P+
Sbjct: 416 LCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPS 475

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
           + TY ++IH    RG L  A   F EM      P+  TYN +  G  +     +A  L  
Sbjct: 476 VWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLE 535

Query: 653 DMEEEGILPNKYTYTILI 670
           +M   G   +  T T+L+
Sbjct: 536 EMLARGFSADVSTTTLLV 553



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 137/448 (30%), Positives = 215/448 (47%), Gaps = 35/448 (7%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V  K+L+ G  PD      +I+ L   G   +A  ++  M + G +P++VTY T+++  C
Sbjct: 113 VLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLC 172

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K G    A+ LL  M+   C P+ V Y  +I    ++ ++ +A  L   M+  G+     
Sbjct: 173 KVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIF 232

Query: 315 SYNPII---CGYSE--------------------------------KGLLVEALNLEEEM 339
           +Y  ++   C   E                                +G + EA  + + M
Sbjct: 233 TYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMM 292

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
           + RGV P + TY  L+ G C    + +A   F  M+RK   PD+ISY TL+ GYC+   I
Sbjct: 293 IQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKI 352

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
            +A  LF+E+  +  +P   TYNTL+ GLC  G L+ A  L   M+ +G +PD++TY+I+
Sbjct: 353 DKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSIL 412

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           ++  CK  +L  A      +    L PD   Y   I G  + G+   A  L   + +KG 
Sbjct: 413 LDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGL 472

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
            P + TYN+++HGLCK G L EAN+L  +M G+   PD  TY +I    L+  +  R   
Sbjct: 473 HPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQ 532

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARG 607
           L   ML +G S  + T T+L+   +  G
Sbjct: 533 LLEEMLARGFSADVSTTTLLVEMLSDDG 560



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 117/243 (48%)

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
           S     L  A   FN +L     P    +   +    K+   S    L  +M + G PP+
Sbjct: 31  SLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPN 90

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
           + T N+L++  C L  +  A  +L K++  G  PD  T+T++I      G +     LF+
Sbjct: 91  VYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFD 150

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
            M+ +G  P +VTY  LI+     G    A      M+    +P+V+ Y ++I+ LC+ R
Sbjct: 151 KMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDR 210

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
           ++ +A+ LF  M  +GI P+ +TYT L++  CN   W+    L  +M++ +I PD    S
Sbjct: 211 QVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFS 270

Query: 703 ALL 705
            ++
Sbjct: 271 TVV 273



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 77/151 (50%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +LL    K   +E+ + +   +  + L PD++  N II  +   G    AR+++  +   
Sbjct: 411 ILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSK 470

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G+ PS+ TYN M+   CK G + EA +L  EM G  CSP+G TYN +  GF +N E  +A
Sbjct: 471 GLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRA 530

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
             L+ +ML  G      +   ++   S+ GL
Sbjct: 531 IQLLEEMLARGFSADVSTTTLLVEMLSDDGL 561



 Score = 45.8 bits (107), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 1/125 (0%)

Query: 173 IKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR 232
           I++ ++++    +   +E    +F+ +   GL P V   N +I  L   G   +A +++ 
Sbjct: 441 IQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFM 500

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
            M      P   TYNT+   F +  E   A++LL EM  RG S +  T  +L+   S +G
Sbjct: 501 EMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDG 560

Query: 293 ELEQA 297
            L+Q+
Sbjct: 561 -LDQS 564


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  290 bits (741), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 186/620 (30%), Positives = 302/620 (48%), Gaps = 74/620 (11%)

Query: 157 GILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK 216
           G+LD++   G+    ++      ++ Y +   VE+   ++  M+RNG+L DV   + ++ 
Sbjct: 225 GVLDMMKEAGVDP--NVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVA 282

Query: 217 VL-RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGC- 274
            L RD  FS +A  ++R M + G  P+ VTY T++DS  K G  +E L LL EM  RG  
Sbjct: 283 GLCRDGRFS-EAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVV 341

Query: 275 ----------------------------------SPNGVTYNVLITGFSRNGELEQARGL 300
                                             SPNGVTY VLI    +   +++A  +
Sbjct: 342 MDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQV 401

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           + +M +  +  +  +++ +I G+ ++GLL +A   +  M  RG+ P + TY  LI G  K
Sbjct: 402 LLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFK 461

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
           +     A   + +ML + V  +    ++L+ G  ++G I EA  LF +     L    V 
Sbjct: 462 FQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVN 521

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y TLIDGL + GD+  A +  + ++++ +LPD + Y + +N  C +G    A+ F  EM 
Sbjct: 522 YTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMR 581

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
             GL+PD+  Y T I    + G+T++A +L  EM      P+LITYN LV GL   G++E
Sbjct: 582 NMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVE 641

Query: 541 EANELLRKMVGDGFIPDHITYTSI------------------------IHASLEM----- 571
           +A  LL +MV  GF P  +T+  +                        +HA + +     
Sbjct: 642 KAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLL 701

Query: 572 ------GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
                 G  R+   +   ML  G++P  +T+  LI  H     L+ AF  +++M  + I 
Sbjct: 702 QVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNIS 761

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           PN+ T+N L+ GL  + RI +A  + I+ME+ G+ PN  TY IL   +    N  EA+RL
Sbjct: 762 PNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRL 821

Query: 686 YKEMLDREIEPDYCTHSALL 705
           Y EM+ +   P   T++AL+
Sbjct: 822 YCEMVGKGFVPKVSTYNALI 841



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 156/514 (30%), Positives = 245/514 (47%), Gaps = 3/514 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
            EQ LL   +M    + P+V   + +I      G   KA E  RMM E GI P++VTY T
Sbjct: 398 AEQVLL---EMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGT 454

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++D F K      ALE+  +M   G   N    + L+ G  +NG++E+A  L +D    G
Sbjct: 455 LIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSG 514

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           L +   +Y  +I G  + G +  A    +E++ R + P    YN+ I  LC  G+  +A+
Sbjct: 515 LSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAK 574

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               EM    + PD  +YNT++  +CR G   +A  L  E++  ++ P ++TYNTL+ GL
Sbjct: 575 SFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGL 634

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
              G +E A+ L   M++ G  P  +T+  ++    +   L +  +    M+  GL  D 
Sbjct: 635 FGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADI 694

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             Y T +      G T +A  + EEML  G  PD IT+N L+ G CK   L+ A     +
Sbjct: 695 TVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQ 754

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M+     P+  T+ +++     +G +     +   M + GL P  +TY +L   H  +  
Sbjct: 755 MLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSN 814

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
              A   + EM  KG  P V TYNALI+   +   + QA  LF DM++ G+ P   TY I
Sbjct: 815 KVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDI 874

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
           L++      N  E  +  K+M ++   P   T S
Sbjct: 875 LVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLS 908



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 161/591 (27%), Positives = 274/591 (46%), Gaps = 45/591 (7%)

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
           +SS  ++ +LD+     T  +     L V ++M   GL  DV   N ++      G    
Sbjct: 168 MSSAGTLSLLDIAGFGDTPAA-----LSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDA 222

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           AR V  MM E G+ P++ TY   +  +C+   ++EA +L   M   G   + VT + L+ 
Sbjct: 223 ARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVA 282

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G  R+G   +A  L R+M K+G   +  +Y  +I   ++ G   E L+L  EMV+RGV  
Sbjct: 283 GLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVM 342

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
            L TY  L+  L K G+  + +      L  N+ P+ ++Y  L+   C++ N+ EA  + 
Sbjct: 343 DLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVL 402

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
            E+  +++ P VVT++++I+G  + G L+ A + K  M  +GI P+V+TY  +++G  K 
Sbjct: 403 LEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKF 462

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
                A E +++ML +G++ ++F   + + G  + G   EA  L ++    G   D + Y
Sbjct: 463 QGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNY 522

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
             L+ GL K G +  A +  ++++    +PD + Y   I+    +G  +  +     M  
Sbjct: 523 TTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRN 582

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
            GL P   TY  +I +H  +G    A     EM++  I+PN+ITYN L+ GL     +++
Sbjct: 583 MGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEK 642

Query: 647 AYGLFIDMEEEGILPNKYT-----------------------------------YTILIN 671
           A  L  +M   G  P+  T                                   Y  L+ 
Sbjct: 643 AKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQ 702

Query: 672 ENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL-----KQLDKDYKVHA 717
             C  G  ++A  + +EML   I PD  T +AL+L       LD  +  +A
Sbjct: 703 VLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYA 753



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 247/512 (48%), Gaps = 3/512 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM-LDSF 253
           V  +M + G+  D    N ++  L  NG    A  +    G  GI P + +  T+ L   
Sbjct: 122 VLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRAG--GITPWMSSAGTLSLLDI 179

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
              G+   AL +   M  +G   + V YN L+ GF R G+++ ARG++  M + G+  + 
Sbjct: 180 AGFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNV 239

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
            +Y P I  Y     + EA +L E MV  GV   + T + L+ GLC+ GR S+A   F E
Sbjct: 240 ATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFRE 299

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M +    P+ ++Y TL+    ++G   E   L  E+ SR +V  +VTY  L+D L + G 
Sbjct: 300 MDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGK 359

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
            +  +      ++  + P+ +TYT++++  CK  N+  A +   EM  K + P+   +++
Sbjct: 360 TDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSS 419

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            I G +K G   +A   +  M  +G  P+++TY  L+ G  K    + A E+   M+ +G
Sbjct: 420 VINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEG 479

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
              +     S+++   + G +     LF +    GLS   V YT LI      G +  AF
Sbjct: 480 VKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAF 539

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
            +  E+  + + P+ + YN  IN LC L +  +A     +M   G+ P++ TY  +I  +
Sbjct: 540 KFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSH 599

Query: 674 CNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           C  G   +AL+L  EM    I+P+  T++ L+
Sbjct: 600 CRKGETAKALKLLHEMKMSSIKPNLITYNTLV 631



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 194/388 (50%), Gaps = 1/388 (0%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           M RN +LPD    N  I  L   G   +A+     M   G+KP   TYNTM+ S C++GE
Sbjct: 546 MDRN-MLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGE 604

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
             +AL+LL EM+     PN +TYN L+ G    G +E+A+ L+ +M+  G   S+ ++  
Sbjct: 605 TAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRR 664

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           ++   S+   L   L++ E M+  G+   +  YN L+  LC  G    A     EML   
Sbjct: 665 VLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSG 724

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
           + PD I++N L+ G+C+S ++  AF  + ++  +N+ P + T+NTL+ GL   G +  A 
Sbjct: 725 IAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAG 784

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
            +   M   G+ P+ +TY I+  G  K  N   A   + EM+ KG  P    Y   I+  
Sbjct: 785 TVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDF 844

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
            K G  ++A  L ++M  +G  P   TY++LV G  ++ +  E  + L+ M   GF P  
Sbjct: 845 TKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSK 904

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLR 586
            T + I  A  + G   + + L  N+ R
Sbjct: 905 GTLSFICRAFSKPGMTWQAQRLLKNLYR 932



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 162/385 (42%), Gaps = 61/385 (15%)

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL--------------VPTV--------- 418
           D  S N LLY +CR   +  A  L    R   +               P V         
Sbjct: 72  DPASLNALLYSHCRLRLLRPAIALLRSSRPTTVAYNILLAALSDHAHAPAVLAEMCKRGV 131

Query: 419 ----VTYNTLIDGLCR----------------------------------YGDLEVAQQL 440
               VT NTL+ GLCR                                  +GD   A  +
Sbjct: 132 PFDGVTVNTLLAGLCRNGQVDAAAALADRAGGITPWMSSAGTLSLLDIAGFGDTPAALSV 191

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
            + M  QG+  DV+ Y  +V G C+ G +  AR   + M   G+ P+   YT  I    +
Sbjct: 192 ADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCR 251

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
                EA+ L E M+  G   D++T + LV GLC+ G   EA  L R+M   G  P+H+T
Sbjct: 252 TKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVT 311

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           Y ++I +  + G  +    L   M+ +G+   LVTYT L+     +G+ +          
Sbjct: 312 YCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFAL 371

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
              + PN +TY  LI+ LC+   +D+A  + ++MEE+ I PN  T++ +IN     G   
Sbjct: 372 SDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLD 431

Query: 681 EALRLYKEMLDREIEPDYCTHSALL 705
           +A    + M +R I P+  T+  L+
Sbjct: 432 KATEYKRMMKERGINPNVVTYGTLI 456



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 131/284 (46%), Gaps = 17/284 (5%)

Query: 95  RVLNRIREKPR--IALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVC 152
           RVL    +  R  + L    W+    G+  D  V+ T+L++L   G+ R A  V+E    
Sbjct: 664 RVLQACSQSRRLDVILDIHEWM-MNAGLHADITVYNTLLQVLCYHGMTRKATVVLEE--- 719

Query: 153 VNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCN 212
                    ++G G++        + L+L + K S ++     + +ML   + P++   N
Sbjct: 720 ---------MLGSGIAP--DTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFN 768

Query: 213 RIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR 272
            ++  L   G   +A  V   M + G++P+ +TY+ +     K+    EA+ L  EM G+
Sbjct: 769 TLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGK 828

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA 332
           G  P   TYN LI+ F++ G + QA+ L +DM K G+  ++ +Y+ ++ G+S      E 
Sbjct: 829 GFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEV 888

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
               ++M  +G +P+  T + +     K G    A+     + R
Sbjct: 889 KKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNLYR 932



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/131 (23%), Positives = 70/131 (53%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           D+L   + K+S   + + ++ +M+  G +P V   N +I      G   +A+E+++ M +
Sbjct: 803 DILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQK 862

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G+ P+  TY+ ++  + +     E  + L +M+ +G SP+  T + +   FS+ G   Q
Sbjct: 863 RGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQ 922

Query: 297 ARGLIRDMLKL 307
           A+ L++++ ++
Sbjct: 923 AQRLLKNLYRV 933


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  289 bits (740), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 158/471 (33%), Positives = 261/471 (55%), Gaps = 7/471 (1%)

Query: 240 KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
           +P++VT+  ++D FCK  ++++AL    +M+    +PN  TYNV++ G  +     +A  
Sbjct: 4   QPTVVTWTIIIDGFCKANQLKQALACFEKMR-EFVAPNERTYNVVVNGLCKARLTSKAYE 62

Query: 300 LIRDMLKLGLKVSAH--SYNPIICGYSEKGLLVEALNLEEEMVTR-GVAPTLATYNILIY 356
           ++++M + G  V+    +Y+ +I G+ ++G +  A  +  EMVTR G+AP + TY  ++ 
Sbjct: 63  VLKEM-RDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVD 121

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDE-LRSRNLV 415
           GLC+ G++  A     EM  K V PD  +++ L+ G+C +  + EA  L+ E L S +  
Sbjct: 122 GLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWK 181

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P VVTY  LIDG C+ G+LE A ++   M  +  +P+V+TY+ +++G CK G+L  A + 
Sbjct: 182 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 241

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
           F  M  KG  P+   YTT I G         A  L +EM A   PPD ++YN L+ G C+
Sbjct: 242 FRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCR 301

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM-LRKGLSPTLV 594
           LG +EEA +L ++M     +PD ITYT ++        L   R L  NM    G+ P +V
Sbjct: 302 LGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVV 361

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           TY++++  ++   R   A  +  EM  + + PN +TY++LI+GLC+  R+D A  +  +M
Sbjct: 362 TYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNM 421

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             + + P+  T+  +I   C  G+  EA +L   M    +EP   T++ LL
Sbjct: 422 VNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLL 472



 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 163/526 (30%), Positives = 282/526 (53%), Gaps = 14/526 (2%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF-GIKP 241
           + K + ++Q L  F KM R  + P+ +  N ++  L     + KA EV + M +   + P
Sbjct: 17  FCKANQLKQALACFEKM-REFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAP 75

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGR-GCSPNGVTYNVLITGFSRNGELEQARGL 300
            +VTY+T+++ FCK+GEM  A E+L EM  R G +P+ VTY  ++ G  R+G++++A  +
Sbjct: 76  DLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEM 135

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV-APTLATYNILIYGLC 359
           +R+M   G++    +++ +I G+     + EAL L +E++T     P + TY  LI G C
Sbjct: 136 VREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFC 195

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
           K G +  A      M  +  +P++++Y++LL+G C++G++ +A  LF  + S+  VP VV
Sbjct: 196 KSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVV 255

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
           TY TLI GLC    ++ A+ L + M      PD ++Y  +++G C++G +  A++ F EM
Sbjct: 256 TYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEM 315

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM-LAKGFPPDLITYNVLVHGLCKLGS 538
             K   PDR  YT  + G        EA  L E M  A G  PD++TY+++V G  +   
Sbjct: 316 ATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKR 375

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
             EA E +++M+     P+ +TY+S+I    + G +    ++  NM+ K + P++ T+  
Sbjct: 376 FVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNS 435

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME--- 655
           +I A    G ++ A+     M   G+ P ++TY  L+ G  R  R++ AY LF  M    
Sbjct: 436 VIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKA 495

Query: 656 -----EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
                   ++P +  ++ LI   C A    +A+ + +E+  RE EP
Sbjct: 496 KKSSSAANLVPEQ-AFSALIRGLCKAREIDKAMAVVEELRSRECEP 540



 Score =  261 bits (668), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 138/383 (36%), Positives = 226/383 (59%), Gaps = 5/383 (1%)

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           PT+ T+ I+I G CK  ++  A    FE +R+ V P+  +YN ++ G C++    +A+ +
Sbjct: 5   PTVVTWTIIIDGFCKANQLKQALA-CFEKMREFVAPNERTYNVVVNGLCKARLTSKAYEV 63

Query: 406 FDELRS-RNLVPTVVTYNTLIDGLCRYGDLEVAQQ-LKENMINQGILPDVITYTIMVNGS 463
             E+R  +++ P +VTY+T+I+G C+ G+++ A + L+E +   GI PDV+TYT +V+G 
Sbjct: 64  LKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGL 123

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML-AKGFPPD 522
           C+ G +  A E   EM  KG++PD+F ++  I G        EA +L +E+L +  + PD
Sbjct: 124 CRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPD 183

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
           ++TY  L+ G CK G+LE+A ++L  M G   +P+ +TY+S++H   + GDL +  DLF 
Sbjct: 184 VVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFR 243

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
            M  KG  P +VTYT LIH   A  +++ A +   EM      P+ ++YNAL++G CRL 
Sbjct: 244 RMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLG 303

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE-IEPDYCTH 701
           RI++A  LF +M  +  LP++ TYT L+   CNA   +EA  L + M     I+PD  T+
Sbjct: 304 RIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTY 363

Query: 702 SALLLKQLDKDYKVHAVEYLESL 724
           S ++         V A E+++ +
Sbjct: 364 SIVVAGYSRAKRFVEAAEFIQEM 386



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 118/411 (28%), Positives = 193/411 (46%), Gaps = 46/411 (11%)

Query: 189 VEQCLLVFNKML-RNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
           V++ L ++ ++L  +   PDV     +I     +G   KA ++  +M      P++VTY+
Sbjct: 164 VDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYS 223

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
           ++L   CK G++ +AL+L   M  +GC PN VTY  LI G     +++ AR L+ +M   
Sbjct: 224 SLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTAT 283

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
                  SYN ++ GY   G + EA  L +EM T+   P   TY  L+ G C   R+ +A
Sbjct: 284 CCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEA 343

Query: 368 RHRFFEM-LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
           R     M     + PD+++Y+ ++ GY R+    EA     E+ +RN+ P  VTY++LID
Sbjct: 344 RFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLID 403

Query: 427 GLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
           GLC+ G ++ A ++ +NM+N+ + P V T+  ++   C++G++  A +    M   GL+P
Sbjct: 404 GLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEP 463

Query: 487 DRFAYTTQIAGELKLGDTSEAYRLQEEM--------LAKGFPPDLITYNVLVHGLCKL-- 536
               YTT + G  + G    AY L E M         A    P+   ++ L+ GLCK   
Sbjct: 464 GMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQ-AFSALIRGLCKARE 522

Query: 537 ---------------------------------GSLEEANELLRKMVGDGF 554
                                            G  EEA +L+  +   G 
Sbjct: 523 IDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 573



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/421 (26%), Positives = 184/421 (43%), Gaps = 57/421 (13%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           AL+ ++ + T    K D   +  +++   +SG L  A         + M G+++     G
Sbjct: 167 ALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKA---------MKMLGVME-----G 212

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
                ++     LL    K   ++Q L +F +M   G +P+V     +I  L        
Sbjct: 213 RKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDA 272

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           AR +   M      P  V+YN +LD +C+ G ++EA +L  EM  + C P+ +TY  L+ 
Sbjct: 273 ARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVR 332

Query: 287 GFSRNGELEQARGLIRDM-LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
           GF     LE+AR L+ +M    G+     +Y+ ++ GYS     VEA    +EM+ R VA
Sbjct: 333 GFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVA 392

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P   TY+ LI GLCK GRV  A      M+ K V P + ++N+++   CR G++ EA+ L
Sbjct: 393 PNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKL 452

Query: 406 FDELRSRNLVPTVVTYNTLID--------------------------------------- 426
              + +  L P +VTY TL++                                       
Sbjct: 453 LVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSA 512

Query: 427 ---GLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
              GLC+  +++ A  + E + ++   P       +V+G  + G    A +  N + + G
Sbjct: 513 LIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVG 572

Query: 484 L 484
           L
Sbjct: 573 L 573


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  289 bits (740), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 167/537 (31%), Positives = 281/537 (52%), Gaps = 42/537 (7%)

Query: 206 PDVKNCNRIIKVLR-DNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALE 264
           P  ++ N ++ VL   N  SV +   Y M+ + G+ P+  T+  ++ + C   E+  A  
Sbjct: 173 PSFRSYNVVLDVLVVGNCPSVASNVFYDMLSK-GVSPNDYTFGLVMKALCMVNEVDNACL 231

Query: 265 LLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYS 324
           LL +M   GC PN + Y  LI   S+   +++A  L+ +M  +G     +++N +I G+ 
Sbjct: 232 LLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFC 291

Query: 325 EKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDII 384
               ++E   L + M+ +G  P   TY  L++GLCK  R+ +A+     +L K   P+++
Sbjct: 292 RLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQ----ALLSKVPGPNVV 347

Query: 385 SYNTLLYGYCRSGNIGEA-FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
            +NTL+ G+ R+G + EA   ++D++ +   VP V T++TL++GLC+ G    A +L  +
Sbjct: 348 HFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVND 407

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           M  +G  P++ TYTI+++G CK G L  A     EML KG   +   Y   I+   K G 
Sbjct: 408 MDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGK 467

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
             EA  +  EM +KG  PD+ T+N L+ GLC++  +E+A  L R MV +G I + +T+ +
Sbjct: 468 IHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNT 527

Query: 564 IIHASLEMGDLR-----------------------------------RGRDLFNNMLRKG 588
           +IHA L  G+++                                   +G  LF  M+RKG
Sbjct: 528 LIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKG 587

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
           L+P+++T  +LI+     G++  A  +  +M  +G  P+++TYN+LINGLC+  RI +A 
Sbjct: 588 LTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEAL 647

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            LF  ++ EGI P+  TY  LI   C  G + +A  L    ++    P+  T + L+
Sbjct: 648 NLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILV 704



 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 161/480 (33%), Positives = 250/480 (52%), Gaps = 5/480 (1%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
            R +  M G +  +PS  +YN +LD          A  + ++M  +G SPN  T+ +++ 
Sbjct: 159 TRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMK 218

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
                 E++ A  L+RDM K G   ++  Y  +I   S++  + EAL L EEM   G  P
Sbjct: 219 ALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPP 278

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
            + T+N +IYG C+  RV +       M+ K   P+ ++Y  L++G C++  I EA  L 
Sbjct: 279 DVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALL 338

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDL-EVAQQLKENMINQGILPDVITYTIMVNGSCK 465
            ++      P VV +NTL++G  R G L E    + + MIN G +PDV T++ +VNG CK
Sbjct: 339 SKVPG----PNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCK 394

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
            G    A E  N+M  KG +P+   YT  I G  K G   EA  +  EML KGF  + + 
Sbjct: 395 KGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVG 454

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           YN L+  LCK G + EA ++  +M   G  PD  T+ S+I     + ++     L+ +M+
Sbjct: 455 YNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMV 514

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
            +G+    VT+  LIHA   RG ++ A    ++M  +G   + ITYN LI  LC+   ++
Sbjct: 515 LEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVE 574

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +  GLF +M  +G+ P+  T  ILIN  C AG    AL   ++M+ R   PD  T+++L+
Sbjct: 575 KGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLI 634



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 130/362 (35%), Positives = 210/362 (58%), Gaps = 1/362 (0%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKARE-VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALE 264
           P+V + N ++     NG   +A   VY  M   G  P + T++T+++  CK+G    ALE
Sbjct: 344 PNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALE 403

Query: 265 LLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYS 324
           L+ +M  +GC PN  TY +LI GF + G+LE+A  ++R+ML  G  ++   YN +I    
Sbjct: 404 LVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALC 463

Query: 325 EKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDII 384
           + G + EAL++  EM ++G  P + T+N LI+GLC+   + DA   + +M+ + VI + +
Sbjct: 464 KHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSV 523

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
           ++NTL++ + R G I EA  L +++  R      +TYN LI  LC+ G +E    L E M
Sbjct: 524 TFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEM 583

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
           I +G+ P +IT  I++NG C  G +  A EF  +M+ +G  PD   Y + I G  K G  
Sbjct: 584 IRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRI 643

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
            EA  L E++ A+G  PD ITYN L+  LC+ G+ ++A  LL + V +GF+P+ +T+  +
Sbjct: 644 QEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNIL 703

Query: 565 IH 566
           ++
Sbjct: 704 VY 705



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 113/351 (32%), Positives = 188/351 (53%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           E    V++KM+ NG +PDV   + ++  L   G    A E+   M   G KP++ TY  +
Sbjct: 364 EATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTIL 423

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           +D FCK+G+++EA  +L EM  +G S N V YN LI+   ++G++ +A  +  +M   G 
Sbjct: 424 IDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGC 483

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
           K    ++N +I G      + +AL L  +MV  GV     T+N LI+   + G + +A  
Sbjct: 484 KPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALK 543

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
              +ML +    D I+YN L+   C++G + +   LF+E+  + L P+++T N LI+G C
Sbjct: 544 LVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFC 603

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
             G +  A +   +MI++G  PD++TY  ++NG CK G +  A   F ++  +G+QPD  
Sbjct: 604 TAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSI 663

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            Y T I    + G   +A  L    +  GF P+ +T+N+LV+   K  + E
Sbjct: 664 TYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQSNSE 714



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 115/353 (32%), Positives = 180/353 (50%), Gaps = 20/353 (5%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVV---ETVVCVNMHGILDVLIGGGLSSCVSIKI 175
           G   D F F T++  L + GL  SA  +V   +   C        +LI G          
Sbjct: 377 GYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDG---------- 426

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
                  + KK  +E+  L+  +ML  G   +    N +I  L  +G   +A +++  M 
Sbjct: 427 -------FCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMS 479

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
             G KP I T+N+++   C+  EM++AL L  +M   G   N VT+N LI  F R GE++
Sbjct: 480 SKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQ 539

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
           +A  L+ DML  G  +   +YN +I    + G + + L L EEM+ +G+ P++ T NILI
Sbjct: 540 EALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILI 599

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
            G C  G+V +A     +M+ +   PDI++YN+L+ G C+ G I EA  LF++L++  + 
Sbjct: 600 NGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQ 659

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
           P  +TYNTLI  LCR G  + A  L    +  G +P+ +T+ I+V    K  N
Sbjct: 660 PDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQSN 712



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 14/177 (7%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G   DE  +  +++ L ++G +                G+ + +I  GL+   SI   ++
Sbjct: 552 GCPLDEITYNGLIKALCKTGAVEKGL------------GLFEEMIRKGLTP--SIITCNI 597

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  +     V   L     M+  G  PD+   N +I  L   G   +A  ++  +   G
Sbjct: 598 LINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEG 657

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
           I+P  +TYNT++   C+EG   +A  LL+     G  PN VT+N+L+  F +    E
Sbjct: 658 IQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQSNSE 714


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  289 bits (740), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 163/513 (31%), Positives = 274/513 (53%), Gaps = 1/513 (0%)

Query: 188 MVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
           M+ + L     +L  G L D      +I  L  NG    A  + + M +  ++P++V Y+
Sbjct: 140 MIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYS 199

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
            ++D  CK+G + +AL L  ++  RG   + VTYN LI G    G  ++   L+  M++ 
Sbjct: 200 ALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRE 259

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
            +    +++N +I    ++G ++EA  +   M  RG  P + TYN L+ G C    V +A
Sbjct: 260 NVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEA 319

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
           R  F  M+++ + PD+++YN L+ GYC++  + EA +LF EL ++NLVPT+ +YN+LIDG
Sbjct: 320 RELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDG 379

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           LC  G +   ++L + M      PDV+TY I+++  CK G +  A      M++KG++P+
Sbjct: 380 LCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPN 439

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              Y   + G     + + A  +   M+  G  PD++ YNVL++G CK   ++EA  L +
Sbjct: 440 IVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFK 499

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
           +M     IPD  +Y S+I     +G +   ++L + M   G SP ++TY +L+ A     
Sbjct: 500 EMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQ 559

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
             + A   F ++ V+GI P+  T +A+++ LC+  ++  A      +   G  PN  TYT
Sbjct: 560 PFDKAISLFRQI-VEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYT 618

Query: 668 ILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
           ILIN  C  G++ EA+ L  +M D +  PD  T
Sbjct: 619 ILINALCKDGSFGEAMLLLSKMEDNDRPPDAIT 651



 Score =  288 bits (737), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 165/517 (31%), Positives = 263/517 (50%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V+  +  FN+M+R    P     ++++  +   G    A  ++  +   GI PSI T+  
Sbjct: 36  VDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTI 95

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++ +  +     A  LL  +   G  PN VT+N +I GF  NG + +A    +++L  G
Sbjct: 96  LINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQG 155

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
                 +Y  +I G S+ G +  AL+L +EM    V P L  Y+ LI GLCK G VSDA 
Sbjct: 156 YLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDAL 215

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               ++  + ++ D ++YN+L+ G C  G   E   L  ++   N+ P   T+N LID L
Sbjct: 216 GLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDAL 275

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G +  AQ +   M  +G  PD++TY  ++ G C   N+  ARE FN M+++GL+PD 
Sbjct: 276 CKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDV 335

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             Y   I G  K     EA  L +E+  K   P + +YN L+ GLC  G +    +LL +
Sbjct: 336 LNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDE 395

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M G    PD +TY  +I A  + G +     +   M++KG+ P +VTY  ++  +  R  
Sbjct: 396 MHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNN 455

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           + +A   F+ M   G+ P+++ YN LING C+   +D+A  LF +M  + ++P+  +Y  
Sbjct: 456 VNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNS 515

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           LI+  CN G       L  EM D    PD  T++ LL
Sbjct: 516 LIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILL 552



 Score =  286 bits (733), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 159/531 (29%), Positives = 284/531 (53%), Gaps = 1/531 (0%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           + D LL    +       + +F ++   G+ P +     +I        +  A  +   +
Sbjct: 57  VFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATI 116

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
            + G +P++VT+NT+++ FC  G + +AL+    +  +G   +  TY  LI G S+NG++
Sbjct: 117 LKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQI 176

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           + A  L+++M K  ++ +   Y+ +I G  + G + +AL L  ++  RG+     TYN L
Sbjct: 177 KAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSL 236

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           I G C  GR  +      +M+R+NV PD  ++N L+   C+ G I EA  +   +  R  
Sbjct: 237 IDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGE 296

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P +VTYN L++G C   ++  A++L   M+ +G+ PDV+ Y ++++G CK   +  A  
Sbjct: 297 KPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMV 356

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
            F E+  K L P   +Y + I G    G  S   +L +EM     PPD++TYN+L+  LC
Sbjct: 357 LFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALC 416

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           K G + EA  +L  M+  G  P+ +TY +++       ++   +D+FN M++ GL P ++
Sbjct: 417 KEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDIL 476

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
            Y VLI+ +     ++ A + F EM+ K + P++ +YN+LI+GLC L RI     L  +M
Sbjct: 477 NYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEM 536

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            + G  P+  TY IL++  C    + +A+ L++++++  I PD+ T+ A++
Sbjct: 537 CDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIV 586



 Score =  281 bits (719), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 168/509 (33%), Positives = 262/509 (51%), Gaps = 1/509 (0%)

Query: 184 TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
           +K   ++  L +  +M ++ + P++   + +I  L  +GF   A  +   +GE GI    
Sbjct: 171 SKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDA 230

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           VTYN+++D  C  G  QE  +LL +M      P+  T+N+LI    + G + +A+G++  
Sbjct: 231 VTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAM 290

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M K G K    +YN ++ GY  +  + EA  L   MV RG+ P +  YN+LI G CK   
Sbjct: 291 MSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKM 350

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           V +A   F E+  KN++P I SYN+L+ G C SG I     L DE+      P VVTYN 
Sbjct: 351 VDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNI 410

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           LID LC+ G +  A  +   M+ +G+ P+++TY  M++G C   N+++A++ FN M++ G
Sbjct: 411 LIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSG 470

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           L+PD   Y   I G  K     EA  L +EM  K   PD+ +YN L+ GLC LG +    
Sbjct: 471 LEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQ 530

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
           ELL +M   G  PD ITY  ++ A  +     +   LF  ++ +G+ P   T   ++   
Sbjct: 531 ELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPDFYTNHAIVDNL 589

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
               +L++A      + + G  PNV TY  LIN LC+     +A  L   ME+    P+ 
Sbjct: 590 CKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDA 649

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDR 692
            T+ I+I          +A +L +EM+ R
Sbjct: 650 ITFEIIIGVLLQRNETDKAEKLREEMIAR 678



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 154/539 (28%), Positives = 243/539 (45%), Gaps = 91/539 (16%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVE----TVVCVNM---HGIL 159
           AL F + +  Q G   D+F + T++  L ++G +++A  +++    + V  N+     ++
Sbjct: 144 ALDFCQNLLAQ-GYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALI 202

Query: 160 DVLIGGGLSS-----CVSIKILDLLLLIYTKKSMVEQCLLV---------FNKMLRNGLL 205
           D L   G  S     C  I    +LL   T  S+++ C  V           KM+R  + 
Sbjct: 203 DGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVD 262

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           PD    N +I  L   G  ++A+ V  MM + G KP IVTYN +++ +C    + EA EL
Sbjct: 263 PDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEAREL 322

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
              M  RG  P+ + YNVLI G+ +   +++A  L +++    L  +  SYN +I G   
Sbjct: 323 FNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCN 382

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR---------------------- 363
            G +     L +EM      P + TYNILI  LCK GR                      
Sbjct: 383 SGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVT 442

Query: 364 -------------VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
                        V+ A+  F  M++  + PDI++YN L+ GYC++  + EA +LF E+R
Sbjct: 443 YNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMR 502

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG--- 467
            +NL+P + +YN+LIDGLC  G +   Q+L + M + G  PDVITY I+++  CK     
Sbjct: 503 HKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFD 562

Query: 468 -------------------------------NLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
                                           L MA +    +L  G  P+   YT  I 
Sbjct: 563 KAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILIN 622

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
              K G   EA  L  +M     PPD IT+ +++  L +    ++A +L  +M+  G +
Sbjct: 623 ALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLV 681



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 174/347 (50%)

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C++  V DA   F  M+R    P    ++ LL    R G+   A  LF +L+S+ + P++
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
            T+  LI+          A  L   ++  G  P+++T+  ++NG C  G +  A +F   
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           +L +G   D+F Y T I G  K G    A  L +EM      P+L+ Y+ L+ GLCK G 
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           + +A  L  ++   G + D +TY S+I     +G  +    L   M+R+ + P   T+ +
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           LI A    GR+  A    + M  +G +P+++TYNAL+ G C    + +A  LF  M + G
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           + P+   Y +LI+  C      EA+ L+KE+ ++ + P   ++++L+
Sbjct: 331 LEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLI 377



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 122/243 (50%)

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
           +C+  N+  A   FN M+R    P    +   +   +++G    A  L  ++ +KG  P 
Sbjct: 30  NCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPS 89

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
           + T+ +L++          A  LL  ++  G+ P+ +T+ +II+     G + +  D   
Sbjct: 90  IATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQ 149

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
           N+L +G      TY  LI+  +  G+++ A     EM+   ++PN++ Y+ALI+GLC+  
Sbjct: 150 NLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDG 209

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
            +  A GL   + E GIL +  TY  LI+  C+ G WQE  +L  +M+   ++PD  T +
Sbjct: 210 FVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFN 269

Query: 703 ALL 705
            L+
Sbjct: 270 ILI 272



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 89/175 (50%)

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
           H  C+  ++++A     +MV     P    +  ++ A + MG       LF  +  KG+S
Sbjct: 28  HKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGIS 87

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           P++ T+T+LI+ +  +     AF   + +   G +PN++T+N +ING C    I +A   
Sbjct: 88  PSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDF 147

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             ++  +G L +++TY  LIN     G  + AL L +EM    ++P+   +SAL+
Sbjct: 148 CQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALI 202


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  289 bits (740), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 169/555 (30%), Positives = 276/555 (49%), Gaps = 38/555 (6%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           + D+L   Y++  MV   L V  KM    L   +   N ++  LR         +VY  +
Sbjct: 170 VWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDI---MWDVYNEI 226

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
              G+  +  T   ++D  C++  +Q+A+  L E  G    P+ V++N L++GF + G +
Sbjct: 227 KASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSV 286

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           + A+     M+K GL    +SYN ++ G    G + EAL    +M   GV P + TYNIL
Sbjct: 287 DVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNIL 346

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
             G    G +S A      ML   + PD+++Y  L+ G+C+ GNI E+F L +++ S+ L
Sbjct: 347 ANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGL 406

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
             ++VTY  L+  LC+ G ++ A  L   M   G+ PD++TY+++++G CK G +  A E
Sbjct: 407 KLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIE 466

Query: 475 FFNEMLRKGLQPDRFA-----------------------------------YTTQIAGEL 499
            + EM  K + P+ F                                    Y   I G  
Sbjct: 467 LYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYA 526

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           KLG+  EA R  ++++ KG  P ++T+N L++G CK G L EA +LL  +   G +P  +
Sbjct: 527 KLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSV 586

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
           TYT++++   E GD+    D+ + M  K + PT +TYTV++      GRL  +      M
Sbjct: 587 TYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYM 646

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
             +G+ P+ ITYN +I   C+   + +A+ L   M +  + P+  TY +LIN  C  GN 
Sbjct: 647 YARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNL 706

Query: 680 QEALRLYKEMLDREI 694
           ++A RL   + D+ I
Sbjct: 707 KDADRLLVTLQDQSI 721



 Score =  283 bits (723), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 150/500 (30%), Positives = 264/500 (52%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P V + N ++      G    A+  + MM ++G+ P + +YN +L   C  G M+EALE 
Sbjct: 268 PSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEF 327

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
             +M+  G  P+ VTYN+L  GF   G +  A  +++ ML  GL     +Y  +ICG+ +
Sbjct: 328 TNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQ 387

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
            G + E+  L+E+M+++G+  ++ TY +L+  LCK GR+ +A     EM    + PD+++
Sbjct: 388 MGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLT 447

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           Y+ L++G C+ G + EA  L++E+ S+ + P     + +I GL   G +  AQ   +++ 
Sbjct: 448 YSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVT 507

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
              +  ++I Y IM++G  K+GN+  A   + +++ KG+ P    + + I G  K G  +
Sbjct: 508 KSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLA 567

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           EA +L + +   G  P  +TY  L++G C+ G +    ++L +M      P  ITYT ++
Sbjct: 568 EAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVV 627

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
               + G L     L   M  +GL P  +TY  +I +      L+ AF   ++M    ++
Sbjct: 628 KGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQ 687

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           P+ +TYN LINGLC    +  A  L + ++++ I   K  YT +I  +C  G+ Q AL  
Sbjct: 688 PSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVF 747

Query: 686 YKEMLDREIEPDYCTHSALL 705
           + +M++R  E     +SA++
Sbjct: 748 FHQMVERGFEVSIRDYSAVI 767



 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 172/533 (32%), Positives = 267/533 (50%)

Query: 165 GGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS 224
           GG     S+   + L+  + K   V+     F  M++ GLLPDV + N ++  L   G  
Sbjct: 262 GGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSM 321

Query: 225 VKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVL 284
            +A E    M   G++P IVTYN + + F   G +  A +++  M   G +P+ VTY +L
Sbjct: 322 EEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTIL 381

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           I G  + G +E++  L   ML  GLK+S  +Y  ++    + G + EA+ L  EM   G+
Sbjct: 382 ICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGL 441

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
            P L TY++LI+GLCK G V +A   + EM  K + P+    + ++ G    G I EA +
Sbjct: 442 KPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQM 501

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
            FD +   ++   ++ YN +IDG  + G++  A +  + +I +GI P ++T+  ++ G C
Sbjct: 502 YFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFC 561

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
           K G L+ A +  + +   GL P    YTT + G  + GD    + +  EM AK   P  I
Sbjct: 562 KKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQI 621

Query: 525 TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM 584
           TY V+V GLCK G L E+ +LL+ M   G  PD ITY ++I +  +  DL++   L N M
Sbjct: 622 TYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQM 681

Query: 585 LRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRI 644
           L+  L P+ VTY VLI+     G L+ A      +Q + IR   + Y  +I   C    +
Sbjct: 682 LQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDV 741

Query: 645 DQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
             A   F  M E G   +   Y+ +IN  C      +A   +  ML   I PD
Sbjct: 742 QNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPD 794



 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 153/467 (32%), Positives = 243/467 (52%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V  +ML NGL PD+     +I      G   ++ ++   M   G+K SIVTY  +L S C
Sbjct: 362 VVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLC 421

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K G + EA+ LL EM+  G  P+ +TY+VLI G  + G +E+A  L  +M    +  ++ 
Sbjct: 422 KSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSF 481

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
             + II G  EKG + EA    + +    VA  +  YNI+I G  K G + +A   + ++
Sbjct: 482 VCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQI 541

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           + K + P I+++N+L+YG+C+ G + EA  L D ++   LVPT VTY TL++G C  GD+
Sbjct: 542 IEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDM 601

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
                +   M  + I P  ITYT++V G CK G L  + +    M  +GL PD+  Y T 
Sbjct: 602 HSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTV 661

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I    K  D  +A++L  +ML     P  +TYNVL++GLC  G+L++A+ LL  +     
Sbjct: 662 IQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSI 721

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
               + YT+II A    GD++     F+ M+ +G   ++  Y+ +I+    R  +  A  
Sbjct: 722 RLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKF 781

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
           +F  M   GI P+      ++N   R    +  + +F  M + G+LP
Sbjct: 782 FFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 828



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 146/495 (29%), Positives = 249/495 (50%), Gaps = 28/495 (5%)

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM---QGRGCSPNGVTYNVLITGFSRNG 292
           E+G + S V++  +     ++G+ +E   +L +M   +G G +P+     +L   F R+ 
Sbjct: 108 EYGFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPS--LCELLCNSF-RDW 164

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
           +L     ++ DML               C YS   ++ +AL +  +M    +  ++ATYN
Sbjct: 165 DLNN---VVWDMLA--------------CAYSRAEMVHDALFVLAKMKVLNLQVSIATYN 207

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY-GYCRSGNIGEAFLLFDELRS 411
            L+Y L    R +D     +  ++ + +P     N +L  G CR   + +A     E   
Sbjct: 208 SLLYNL----RHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGG 263

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
               P+VV++N L+ G C+ G ++VA+     MI  G+LPDV +Y I+++G C  G++  
Sbjct: 264 EEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEE 323

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A EF N+M   G++PD   Y     G   LG  S A+++ + ML  G  PDL+TY +L+ 
Sbjct: 324 ALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILIC 383

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           G C++G++EE+ +L  KM+  G     +TYT ++ +  + G +     L + M   GL P
Sbjct: 384 GHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKP 443

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
            L+TY+VLIH    RG +E A   + EM  K I PN    +A+I+GL     I +A   F
Sbjct: 444 DLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYF 503

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDK 711
             + +  +      Y I+I+     GN  EA+R YK+++++ I P   T ++L+     K
Sbjct: 504 DSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKK 563

Query: 712 DYKVHAVEYLESLTL 726
                AV+ L+++ +
Sbjct: 564 GKLAEAVKLLDTIKV 578



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 153/304 (50%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K   + + +  + +++  G+ P +   N +I      G   +A ++   +   G+ P+
Sbjct: 525 YAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPT 584

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            VTY T+++ +C+EG+M    ++L EM+ +   P  +TY V++ G  + G L ++  L++
Sbjct: 585 SVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLK 644

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M   GL     +YN +I  + +   L +A  L  +M+   + P+  TYN+LI GLC +G
Sbjct: 645 YMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYG 704

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            + DA      +  +++    ++Y T++  +C  G++  A + F ++  R    ++  Y+
Sbjct: 705 NLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYS 764

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            +I+ LC+   +  A+     M+  GI PD     +M+N   + G+ +   E F  M++ 
Sbjct: 765 AVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKC 824

Query: 483 GLQP 486
           GL P
Sbjct: 825 GLLP 828


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  289 bits (740), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 165/513 (32%), Positives = 265/513 (51%), Gaps = 35/513 (6%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A++V   M E G   + VTYN ++   C+ G ++EA     +M+  G  P+G TY  LI 
Sbjct: 241 AKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALIN 300

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G  ++    +A+ L+ +M    LK +   Y  +I G+  +G   EA  + +EMV  GV P
Sbjct: 301 GLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQP 360

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
              TY+ L+ GLCK G++  A     +M+R +  PD I+YN ++ G+ R  +  +AF L 
Sbjct: 361 NKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLL 420

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
            E+ +  + P V TY+ +I GLC+ G+ E A  L E M  +G+ P+   Y  +++G C+ 
Sbjct: 421 SEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCRE 480

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           GN+S+A E F++M +  + PD + Y + I G  K+G   E+ +   +M  +G  P+  TY
Sbjct: 481 GNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTY 540

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           + L+HG  K G LE A +L+++M+  G  P+ + Y  ++ +  +  D+ +    F +ML 
Sbjct: 541 SGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLD 600

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFS----------------------------- 617
           +G+      Y +LIH  ++ G +E AF   S                             
Sbjct: 601 QGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREK 660

Query: 618 ------EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
                 EM  KG+ PN++ YNALI+GLC+   I  A  +F  +  +G++PN  TYT LI+
Sbjct: 661 AFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLID 720

Query: 672 ENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
            +C  G+   A  LY EML   I PD   +S L
Sbjct: 721 GSCKVGDISNAFYLYNEMLATGITPDAFVYSVL 753



 Score =  275 bits (702), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 156/516 (30%), Positives = 268/516 (51%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           ++L+    +   VE+       M   GL+PD      +I  L  +  S +A+ +   M  
Sbjct: 261 NVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSC 320

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
             +KP++V Y  ++D F +EG   EA +++ EM   G  PN +TY+ L+ G  + G++++
Sbjct: 321 AELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDR 380

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  L++ M++   +    +YN II G+       +A  L  EM   G++P + TY+I+I+
Sbjct: 381 ASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIH 440

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           GLC+ G    A     EM  K + P+   Y  L+ GYCR GN+  A  +FD++   N++P
Sbjct: 441 GLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLP 500

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
            +  YN+LI GL + G +E + +    M  +G+LP+  TY+ +++G  K G+L  A +  
Sbjct: 501 DLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLV 560

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
             ML  GL+P+   Y   +    K  D  +     + ML +G   D   Y +L+H L   
Sbjct: 561 QRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSS 620

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G++E A  +L  +  +G +PD   Y+S+I    +  D  +   + + M +KG+ P +V Y
Sbjct: 621 GNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCY 680

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
             LI      G +  A   F+ +  KG+ PN +TY +LI+G C++  I  A+ L+ +M  
Sbjct: 681 NALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLA 740

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
            GI P+ + Y++L     +AG+ ++A+ L +EM  R
Sbjct: 741 TGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLR 776



 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 147/529 (27%), Positives = 276/529 (52%), Gaps = 1/529 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + ++   ++   +  +M+  G+ P+    + +++ L   G   +A  + + M     +P 
Sbjct: 337 FMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPD 396

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            +TYN +++   +    ++A  LL EM+  G SPN  TY+++I G  ++GE E+A  L+ 
Sbjct: 397 TITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLE 456

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M   GLK +A  Y P+I GY  +G +  A  + ++M    V P L  YN LI+GL K G
Sbjct: 457 EMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVG 516

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           RV ++   F +M  + ++P+  +Y+ L++GY ++G++  A  L   +    L P  V Y 
Sbjct: 517 RVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYI 576

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            L++   +  D+E      ++M++QG++ D   Y I+++     GN+  A    + + + 
Sbjct: 577 DLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKN 636

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G  PD   Y++ I+G  K  D  +A+ + +EM  KG  P+++ YN L+ GLCK G +  A
Sbjct: 637 GSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYA 696

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             +   ++  G +P+ +TYTS+I  S ++GD+     L+N ML  G++P    Y+VL   
Sbjct: 697 RNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTG 756

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
            ++ G LE A     EM ++G   ++ ++N L++G C+  ++ +   L   +   G++PN
Sbjct: 757 CSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPN 815

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDK 711
             T   +I+    AG   E   ++ E+  +  E      S+L +  +++
Sbjct: 816 ALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQ 864



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 179/362 (49%), Gaps = 35/362 (9%)

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           + + L  YC+      A  +  E+R R      VTYN LI GLCR G +E A   K++M 
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
           + G++PD  TY  ++NG CK    + A+   +EM    L+P+   Y   I G ++ G+  
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 344

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           EA+++ +EM+A G  P+ ITY+ LV GLCK+G ++ A+ LL++MV D   PD ITY  II
Sbjct: 345 EAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLII 404

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
                    +    L + M   G+SP + TY+++IH     G  E A     EM  KG++
Sbjct: 405 EGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLK 464

Query: 626 PNVITYNALINGLCR-----------------------------------LRRIDQAYGL 650
           PN   Y  LI+G CR                                   + R++++   
Sbjct: 465 PNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKY 524

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLD 710
           F  M+E G+LPN++TY+ LI+     G+ + A +L + MLD  ++P+   +  LL     
Sbjct: 525 FAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFK 584

Query: 711 KD 712
            D
Sbjct: 585 SD 586



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 122/438 (27%), Positives = 209/438 (47%), Gaps = 24/438 (5%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+   +K   VE+    F +M   GLLP+    + +I     NG    A ++ + M + G
Sbjct: 508 LIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTG 567

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           +KP+ V Y  +L+S+ K  ++++       M  +G   +   Y +LI   S +G +E A 
Sbjct: 568 LKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAF 627

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            ++  + K G     H Y+ +I G  +     +A  + +EM  +GV P +  YN LI GL
Sbjct: 628 RVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGL 687

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           CK G +S AR+ F  +L K ++P+ ++Y +L+ G C+ G+I  AF L++E+ +  + P  
Sbjct: 688 CKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDA 747

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
             Y+ L  G    GDLE A  L E M  +G    + ++  +V+G CK G +    +  + 
Sbjct: 748 FVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHV 806

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAY----RLQE---------------EMLAKG- 518
           ++ +GL P+       I+G  + G  SE +     LQ+               +M+ +G 
Sbjct: 807 IMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGK 866

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
            P D++   +  H  CK G+L++A  L   +V         +Y +I+      G L    
Sbjct: 867 IPLDVVDDMIRDH--CKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEAL 924

Query: 579 DLFNNMLRKG-LSPTLVT 595
           +L   M ++G L PTLV 
Sbjct: 925 NLLKEMDKRGNLQPTLVA 942



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 149/341 (43%), Gaps = 30/341 (8%)

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV----NGSCKMGNLS 470
            P    +  L   LC      +A  L   MI     P V+  +I      +G    G   
Sbjct: 119 APAPDAFAHLAMSLCAGSLFNLANGLLIKMIRAYPSPPVVLASIHRALSDSGHPFAGGAR 178

Query: 471 MAREFFNEML----RKGLQPD--RFAYTTQ----------IAGELKLGDTSEAY-RLQE- 512
             R +  E+     R+G +PD  R  + +Q           A   + G   EAY +++E 
Sbjct: 179 RPRGYLQEVWEGAGRRGGRPDDERSGHGSQHSVLQRAVEGSAARGRHGSALEAYCKVREF 238

Query: 513 --------EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
                   EM  +G   + +TYNVL+ GLC+ G++EEA    + M   G +PD  TY ++
Sbjct: 239 DTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGAL 298

Query: 565 IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
           I+   +       + L + M    L P +V Y  LI      G  + AF    EM   G+
Sbjct: 299 INGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGV 358

Query: 625 RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
           +PN ITY+ L+ GLC++ ++D+A  L   M  +   P+  TY ++I  +    + ++A R
Sbjct: 359 QPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFR 418

Query: 685 LYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
           L  EM +  I P+  T+S ++           A + LE +T
Sbjct: 419 LLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMT 459


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  289 bits (739), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 163/518 (31%), Positives = 276/518 (53%), Gaps = 1/518 (0%)

Query: 188 MVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
           M+ + L     +L  G L D      +I  L  NG    A  + + M +  ++P++V Y+
Sbjct: 140 MIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYS 199

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
            ++D  CK+G + +AL L  ++  RG   + VTYN LI G    G  ++   L+  M++ 
Sbjct: 200 ALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRE 259

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
            +    +++N +I    ++G ++EA  +   M  RG  P + TYN L+ G C    V +A
Sbjct: 260 NVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEA 319

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
           R  F  M+++ + PD+++YN L+ GYC++  + EA +LF EL ++NLVPT+ +YN+LIDG
Sbjct: 320 RELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDG 379

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           LC  G +   ++L + M      PDV+TY I+++  CK G +  A      M++KG++P+
Sbjct: 380 LCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPN 439

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              Y   + G     + + A  +   M+  G  PD++ YNVL++G CK   ++EA  L +
Sbjct: 440 IVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFK 499

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
           +M     IPD  +Y S+I     +G +   ++L + M   G SP ++TY +L+ A     
Sbjct: 500 EMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQ 559

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
             + A   F ++ V+GI P+  T +A+++ LC+  ++  A      +   G  PN  TYT
Sbjct: 560 PFDKAISLFRQI-VEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYT 618

Query: 668 ILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           ILIN  C  G++ EA+ L  +M D +  PD  T   ++
Sbjct: 619 ILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIII 656



 Score =  288 bits (736), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 165/517 (31%), Positives = 263/517 (50%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V+  +  FN+M+R    P     ++++  +   G    A  ++  +   GI PSI T+  
Sbjct: 36  VDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTI 95

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++ +  +     A  LL  +   G  PN VT+N +I GF  NG + +A    +++L  G
Sbjct: 96  LINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQG 155

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
                 +Y  +I G S+ G +  AL+L +EM    V P L  Y+ LI GLCK G VSDA 
Sbjct: 156 YLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDAL 215

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               ++  + ++ D ++YN+L+ G C  G   E   L  ++   N+ P   T+N LID L
Sbjct: 216 GLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDAL 275

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G +  AQ +   M  +G  PD++TY  ++ G C   N+  ARE FN M+++GL+PD 
Sbjct: 276 CKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDV 335

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             Y   I G  K     EA  L +E+  K   P + +YN L+ GLC  G +    +LL +
Sbjct: 336 LNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDE 395

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M G    PD +TY  +I A  + G +     +   M++KG+ P +VTY  ++  +  R  
Sbjct: 396 MHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNN 455

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           + +A   F+ M   G+ P+++ YN LING C+   +D+A  LF +M  + ++P+  +Y  
Sbjct: 456 VNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNS 515

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           LI+  CN G       L  EM D    PD  T++ LL
Sbjct: 516 LIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILL 552



 Score =  286 bits (731), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 159/531 (29%), Positives = 284/531 (53%), Gaps = 1/531 (0%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           + D LL    +       + +F ++   G+ P +     +I        +  A  +   +
Sbjct: 57  VFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATI 116

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
            + G +P++VT+NT+++ FC  G + +AL+    +  +G   +  TY  LI G S+NG++
Sbjct: 117 LKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQI 176

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           + A  L+++M K  ++ +   Y+ +I G  + G + +AL L  ++  RG+     TYN L
Sbjct: 177 KAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSL 236

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           I G C  GR  +      +M+R+NV PD  ++N L+   C+ G I EA  +   +  R  
Sbjct: 237 IDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGE 296

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P +VTYN L++G C   ++  A++L   M+ +G+ PDV+ Y ++++G CK   +  A  
Sbjct: 297 KPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMV 356

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
            F E+  K L P   +Y + I G    G  S   +L +EM     PPD++TYN+L+  LC
Sbjct: 357 LFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALC 416

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           K G + EA  +L  M+  G  P+ +TY +++       ++   +D+FN M++ GL P ++
Sbjct: 417 KEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDIL 476

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
            Y VLI+ +     ++ A + F EM+ K + P++ +YN+LI+GLC L RI     L  +M
Sbjct: 477 NYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEM 536

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            + G  P+  TY IL++  C    + +A+ L++++++  I PD+ T+ A++
Sbjct: 537 CDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIV 586



 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 168/509 (33%), Positives = 262/509 (51%), Gaps = 1/509 (0%)

Query: 184 TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
           +K   ++  L +  +M ++ + P++   + +I  L  +GF   A  +   +GE GI    
Sbjct: 171 SKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDA 230

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           VTYN+++D  C  G  QE  +LL +M      P+  T+N+LI    + G + +A+G++  
Sbjct: 231 VTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAM 290

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M K G K    +YN ++ GY  +  + EA  L   MV RG+ P +  YN+LI G CK   
Sbjct: 291 MSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKM 350

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           V +A   F E+  KN++P I SYN+L+ G C SG I     L DE+      P VVTYN 
Sbjct: 351 VDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNI 410

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           LID LC+ G +  A  +   M+ +G+ P+++TY  M++G C   N+++A++ FN M++ G
Sbjct: 411 LIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSG 470

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           L+PD   Y   I G  K     EA  L +EM  K   PD+ +YN L+ GLC LG +    
Sbjct: 471 LEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQ 530

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
           ELL +M   G  PD ITY  ++ A  +     +   LF  ++ +G+ P   T   ++   
Sbjct: 531 ELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPDFYTNHAIVDNL 589

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
               +L++A      + + G  PNV TY  LIN LC+     +A  L   ME+    P+ 
Sbjct: 590 CKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDA 649

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDR 692
            T+ I+I          +A +L +EM+ R
Sbjct: 650 ITFEIIIGVLLQRNETDKAEKLREEMIAR 678



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 154/539 (28%), Positives = 243/539 (45%), Gaps = 91/539 (16%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVE----TVVCVNM---HGIL 159
           AL F + +  Q G   D+F + T++  L ++G +++A  +++    + V  N+     ++
Sbjct: 144 ALDFCQNLLAQ-GYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALI 202

Query: 160 DVLIGGGLSS-----CVSIKILDLLLLIYTKKSMVEQCLLV---------FNKMLRNGLL 205
           D L   G  S     C  I    +LL   T  S+++ C  V           KM+R  + 
Sbjct: 203 DGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVD 262

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           PD    N +I  L   G  ++A+ V  MM + G KP IVTYN +++ +C    + EA EL
Sbjct: 263 PDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEAREL 322

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
              M  RG  P+ + YNVLI G+ +   +++A  L +++    L  +  SYN +I G   
Sbjct: 323 FNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCN 382

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR---------------------- 363
            G +     L +EM      P + TYNILI  LCK GR                      
Sbjct: 383 SGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVT 442

Query: 364 -------------VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
                        V+ A+  F  M++  + PDI++YN L+ GYC++  + EA +LF E+R
Sbjct: 443 YNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMR 502

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG--- 467
            +NL+P + +YN+LIDGLC  G +   Q+L + M + G  PDVITY I+++  CK     
Sbjct: 503 HKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFD 562

Query: 468 -------------------------------NLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
                                           L MA +    +L  G  P+   YT  I 
Sbjct: 563 KAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILIN 622

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
              K G   EA  L  +M     PPD IT+ +++  L +    ++A +L  +M+  G +
Sbjct: 623 ALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLV 681



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 174/347 (50%)

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C++  V DA   F  M+R    P    ++ LL    R G+   A  LF +L+S+ + P++
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
            T+  LI+          A  L   ++  G  P+++T+  ++NG C  G +  A +F   
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           +L +G   D+F Y T I G  K G    A  L +EM      P+L+ Y+ L+ GLCK G 
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           + +A  L  ++   G + D +TY S+I     +G  +    L   M+R+ + P   T+ +
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           LI A    GR+  A    + M  +G +P+++TYNAL+ G C    + +A  LF  M + G
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           + P+   Y +LI+  C      EA+ L+KE+ ++ + P   ++++L+
Sbjct: 331 LEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLI 377



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 122/243 (50%)

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
           +C+  N+  A   FN M+R    P    +   +   +++G    A  L  ++ +KG  P 
Sbjct: 30  NCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPS 89

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
           + T+ +L++          A  LL  ++  G+ P+ +T+ +II+     G + +  D   
Sbjct: 90  IATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQ 149

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
           N+L +G      TY  LI+  +  G+++ A     EM+   ++PN++ Y+ALI+GLC+  
Sbjct: 150 NLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDG 209

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
            +  A GL   + E GIL +  TY  LI+  C+ G WQE  +L  +M+   ++PD  T +
Sbjct: 210 FVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFN 269

Query: 703 ALL 705
            L+
Sbjct: 270 ILI 272



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 89/175 (50%)

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
           H  C+  ++++A     +MV     P    +  ++ A + MG       LF  +  KG+S
Sbjct: 28  HKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGIS 87

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           P++ T+T+LI+ +  +     AF   + +   G +PN++T+N +ING C    I +A   
Sbjct: 88  PSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDF 147

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             ++  +G L +++TY  LIN     G  + AL L +EM    ++P+   +SAL+
Sbjct: 148 CQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALI 202


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  289 bits (739), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 201/688 (29%), Positives = 329/688 (47%), Gaps = 79/688 (11%)

Query: 92  LLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVV 151
           +L  VL +++  P  +L FF+    Q   + +    C ++ IL  + +       +  +V
Sbjct: 62  ILDSVLLKLKFNPIASLHFFKLASKQSNFRPNVNSHCKLVHILSRARMYDETRSYLNELV 121

Query: 152 CVNMHGILDVLIGGGLSSCV-----SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLP 206
             + +    +++   L         S  + D++L IY +K M++  L VF+ M + G +P
Sbjct: 122 TPSKNNYSSLVVWNELVRVFEDFKFSPTVFDMILKIYCEKGMIKNALHVFDNMGKLGCVP 181

Query: 207 DVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELL 266
            +++CNR++  L   G S  A  VY  +   GI P + T + M++++CK+G +  A++ +
Sbjct: 182 SLRSCNRLLSSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFV 241

Query: 267 WEMQGRGCSPNGVTYNVLITGFSRNGELEQA---------RGLIRDMLKL---------- 307
            EM   G   N VTYN LI G    G++E+A         RG++R+ + L          
Sbjct: 242 KEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQ 301

Query: 308 -----------------GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
                            G+ +  ++Y  +I GY     + +A+ L +EM+  G+   L  
Sbjct: 302 CKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFI 361

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
            N LI G CK G+VS+A      M+  ++ P+  SY+TL+ G+CR G + +A  +++E+ 
Sbjct: 362 CNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEML 421

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
              +   VVT+N+L+ GLCR G  E A  +   M+ +G+ PD ++Y  +++   KMG   
Sbjct: 422 RVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFF 481

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            A   +N++L +G     +A+ T I G  K+    EA      M   GF PD +TY  L+
Sbjct: 482 RALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLI 541

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
            G CKLG++EEA ++  KM  +  +P    Y S+I    +    R   DL + M  KGLS
Sbjct: 542 DGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLS 601

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           P +VTY  LI      GRL+ AF  + +M  KG  PNVI  + +++ L RL RID+A  L
Sbjct: 602 PNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANML 661

Query: 651 ---------FID--------------MEEEGI------------LPNKYTYTILINENCN 675
                    F+D              ++ + I            LPN   Y I I   C 
Sbjct: 662 LQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCK 721

Query: 676 AGNWQEALRLYKEMLDREIEPD---YCT 700
           +G   +A +++  +L R   PD   YCT
Sbjct: 722 SGKVDDAKKIFSSLLLRGFSPDNFTYCT 749



 Score =  282 bits (722), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 203/721 (28%), Positives = 326/721 (45%), Gaps = 155/721 (21%)

Query: 126 VFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTK 185
           VF  IL+I  E G++++A  V + +              G L    S++  + LL    +
Sbjct: 150 VFDMILKIYCEKGMIKNALHVFDNM--------------GKLGCVPSLRSCNRLLSSLVR 195

Query: 186 KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV---------------------------- 217
           K      +LV++ + R G++PDV  C+ ++                              
Sbjct: 196 KGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVT 255

Query: 218 ---LRDNGFSV----KAREVYRMMGEFGIKPSIVT------------------------- 245
              L D   S+    +A  V ++MGE GI  + VT                         
Sbjct: 256 YNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREME 315

Query: 246 -----------YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
                      Y  ++D +C+  +M +A+ L  EM   G   N    N LI G+ +NG++
Sbjct: 316 RSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQV 375

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
            +A  L+  M+   L+  ++SY+ ++ G+  +GL+ +A+++  EM+  G+   + T+N L
Sbjct: 376 SEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSL 435

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISY---------------------------- 386
           + GLC+ G   DA H +  ML++ V PD +SY                            
Sbjct: 436 LKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGY 495

Query: 387 -------NTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
                  NT++ G+C+   + EA   F+ ++     P  VTY TLIDG C+ G++E A +
Sbjct: 496 GRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFK 555

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           +KE M  + ILP +  Y  ++ G  K        +  +EM  KGL P+   Y T IAG  
Sbjct: 556 VKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWC 615

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG-------- 551
             G   +A+    +M+ KGF P++I  + +V  L +LG ++EAN LL+KMV         
Sbjct: 616 DEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHG 675

Query: 552 ---------DG------------------FIPDHITYTSIIHASLEMGDLRRGRDLFNNM 584
                    DG                   +P+ + Y   I    + G +   + +F+++
Sbjct: 676 YFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSL 735

Query: 585 LRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRI 644
           L +G SP   TY  LIH ++A G +  AF    EM  +G+ PN+ITYNALINGLC+   +
Sbjct: 736 LLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNL 795

Query: 645 DQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
           D+A  LF  +  +G+ PN  +Y ILI+  C  GN +EAL L  +ML   I P   T+SAL
Sbjct: 796 DRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSAL 855

Query: 705 L 705
           +
Sbjct: 856 I 856



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 144/490 (29%), Positives = 249/490 (50%), Gaps = 35/490 (7%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + ++ +V + + V+N+MLR G+  +V   N ++K L   G    A  V+ +M + G+ P 
Sbjct: 404 FCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPD 463

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            V+Y T+LD   K GE   AL L  ++  RG   +   +N +I GF +  ++ +A     
Sbjct: 464 EVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFN 523

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M +LG +    +Y  +I GY + G + EA  ++E+M    + P++  YN LI GL K  
Sbjct: 524 RMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSK 583

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           +  +      EM  K + P++++Y TL+ G+C  G + +AF  + ++  +   P V+  +
Sbjct: 584 KTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICS 643

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGI--------------------------------- 449
            ++  L R G ++ A  L + M+N  +                                 
Sbjct: 644 KIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKS 703

Query: 450 --LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
             LP+ + Y I + G CK G +  A++ F+ +L +G  PD F Y T I G    G+ ++A
Sbjct: 704 FSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDA 763

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
           + L++EML +G  P++ITYN L++GLCK G+L+ A +L  K+   G  P+ I+Y  +I  
Sbjct: 764 FSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDG 823

Query: 568 SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
             + G+ R   DL N ML++G+SP+L+TY+ LI+    +G +  A     EM+      N
Sbjct: 824 YCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQN 883

Query: 628 VITYNALING 637
           +  +  L+ G
Sbjct: 884 IAKFVKLVEG 893



 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 168/529 (31%), Positives = 270/529 (51%), Gaps = 14/529 (2%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           I + L+  Y K   V +   +  +M+   L P+  + + ++      G   KA  VY  M
Sbjct: 361 ICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEM 420

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
              GI+ ++VT+N++L   C+ G  ++AL +   M  RG +P+ V+Y  L+    + GE 
Sbjct: 421 LRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEF 480

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
            +A  L  D+L  G   S +++N +I G+ +   ++EA      M   G  P   TY  L
Sbjct: 481 FRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTL 540

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           I G CK G V +A     +M ++ ++P I  YN+L+ G  +S    E   L  E+  + L
Sbjct: 541 IDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGL 600

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P VVTY TLI G C  G L+ A     +MI +G  P+VI  + +V+   ++G +  A  
Sbjct: 601 SPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEA-- 658

Query: 475 FFNEMLRKGLQPDRF---AYTTQI--AGELKLGDTSEAYRLQEEMLAKGFP-PDLITYNV 528
             N +L+K +  D F    Y  ++  A +  L     A  L E   +K F  P+ + YN+
Sbjct: 659 --NMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDES--SKSFSLPNSVVYNI 714

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
            + GLCK G +++A ++   ++  GF PD+ TY ++IH     G++     L + ML++G
Sbjct: 715 AIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRG 774

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
           L+P ++TY  LI+     G L+ A   F ++ +KG+ PNVI+YN LI+G C+     +A 
Sbjct: 775 LAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREAL 834

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
            L   M +EGI P+  TY+ LI   C  G+  +A  L  EM  RE+  D
Sbjct: 835 DLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEM--RELFAD 881



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/484 (26%), Positives = 247/484 (51%), Gaps = 3/484 (0%)

Query: 229 EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
           E+ R+  +F   P++  ++ +L  +C++G ++ AL +   M   GC P+  + N L++  
Sbjct: 136 ELVRVFEDFKFSPTV--FDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSL 193

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
            R GE   A  +   + +LG+     + + ++  Y + G +  A++  +EM   G    +
Sbjct: 194 VRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNV 253

Query: 349 ATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDE 408
            TYN LI G    G +  A      M  + ++ + ++   L+ GYCR   + EA  +  E
Sbjct: 254 VTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLRE 313

Query: 409 L-RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG 467
           + RS  +V     Y  LIDG CR   ++ A +L++ M+N G+  ++     ++NG CK G
Sbjct: 314 MERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNG 373

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
            +S A      M+   L+P+ ++Y+T + G  + G  ++A  +  EML  G   +++T+N
Sbjct: 374 QVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHN 433

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
            L+ GLC++G+ E+A  +   M+  G  PD ++Y +++    +MG+  R   L+N++L +
Sbjct: 434 SLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILAR 493

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
           G   +   +  +I+      ++  A   F+ M+  G  P+ +TY  LI+G C+L  +++A
Sbjct: 494 GYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEA 553

Query: 648 YGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLK 707
           + +   ME+E ILP+   Y  LI     +   +E + L  EM  + + P+  T+  L+  
Sbjct: 554 FKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAG 613

Query: 708 QLDK 711
             D+
Sbjct: 614 WCDE 617



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 149/547 (27%), Positives = 258/547 (47%), Gaps = 54/547 (9%)

Query: 99  RIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGI 158
           ++ E  R+ +R   W + +P    + + + T+++     GL+  A  V   ++ V     
Sbjct: 374 QVSEAERLLMRMVDW-DLEP----ESYSYSTLMDGFCREGLVTKAISVYNEMLRV----- 423

Query: 159 LDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL 218
                  G+ S V     + LL    +    E  L V++ ML+ G+ PD  +   ++ +L
Sbjct: 424 -------GIQSNVVTH--NSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLL 474

Query: 219 RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNG 278
              G   +A  ++  +   G   S   +NTM++ FCK  +M EA E    M+  G  P+G
Sbjct: 475 FKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDG 534

Query: 279 VTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
           VTY  LI G+ + G +E+A  +   M K  +  S   YN +I G  +     E ++L  E
Sbjct: 535 VTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSE 594

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
           M  +G++P + TY  LI G C  GR+  A   +F+M+ K   P++I  + ++    R G 
Sbjct: 595 MCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGR 654

Query: 399 IGEAFLL---------------FDELRSRN--------------------LVPTVVTYNT 423
           I EA +L               FD L   +                     +P  V YN 
Sbjct: 655 IDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNI 714

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
            I GLC+ G ++ A+++  +++ +G  PD  TY  +++G    GN++ A    +EML++G
Sbjct: 715 AIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRG 774

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           L P+   Y   I G  K G+   A +L +++  KG  P++I+YN+L+ G CK G+  EA 
Sbjct: 775 LAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREAL 834

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
           +L  KM+ +G  P  ITY+++I+   + GD+ +  +L + M        +  +  L+  H
Sbjct: 835 DLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNIAKFVKLVEGH 894

Query: 604 AARGRLE 610
              G ++
Sbjct: 895 VKCGEVK 901



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/415 (31%), Positives = 216/415 (52%), Gaps = 40/415 (9%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF---GI 239
           Y K   VE+   V  KM +  +LP ++  N +I  L     S K REV  ++ E    G+
Sbjct: 544 YCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFK---SKKTREVMDLLSEMCLKGL 600

Query: 240 KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
            P++VTY T++  +C EG + +A    ++M  +G +PN +  + +++   R G +++A  
Sbjct: 601 SPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANM 660

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA--------PTLATY 351
           L++ M+ L + +          GY ++    +  NL+ + +   +         P    Y
Sbjct: 661 LLQKMVNLDVFLDH--------GYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVY 712

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           NI I GLCK G+V DA+  F  +L +   PD  +Y TL++GY  +GN+ +AF L DE+  
Sbjct: 713 NIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLK 772

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           R L P ++TYN LI+GLC+ G+L+ AQ+L + +  +G+ P+VI+Y I+++G CK GN   
Sbjct: 773 RGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTRE 832

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A +  N+ML++G+ P    Y+  I G  K GD  +A  L +EM       ++  +  LV 
Sbjct: 833 ALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNIAKFVKLVE 892

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTS---IIHASLEMGDLRRGRDLFNN 583
           G  K G +++  +L   M        HIT      I H  +E+       D+F+N
Sbjct: 893 GHVKCGEVKKIAKLHNMM--------HITIPCAGVISHKQMEL-------DVFSN 932


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  289 bits (739), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 161/533 (30%), Positives = 272/533 (51%), Gaps = 34/533 (6%)

Query: 206 PDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALE 264
           P  K+ N ++++L   N   V A   Y M+    I P++ T+  ++ + C   E+  AL 
Sbjct: 174 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSR-KIPPTLFTFGVVMKALCAVNEVDSALS 232

Query: 265 LLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYS 324
           +L +M   GC PN V Y  LI   S+   + +A  L+ +M  +G    A ++N +I G  
Sbjct: 233 VLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 292

Query: 325 EKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN------ 378
           +   + EA  +   M+ RG  P   TY  L+ GLCK GRV  A+  F+ + +        
Sbjct: 293 KFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNT 352

Query: 379 --------------------------VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
                                     ++PD+ +YN+L+YGY + G +G A  +  ++R++
Sbjct: 353 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNK 412

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
              P V +Y  L+DG C+ G ++ A  L   M   G+ P+ + +  +++  CK   +  A
Sbjct: 413 GCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 472

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
            E F EM RKG +PD + + + I+G  ++ +   A  L  +M+++G   + +TYN L++ 
Sbjct: 473 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINA 532

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
             + G ++EA +L+ +MV  G + D ITY S+I      G++ + R LF  MLR GL P+
Sbjct: 533 FLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPS 592

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
            ++  +LI+     G +E A  +  EM ++G  P+++T+N+LINGLCR  RI+    +F 
Sbjct: 593 SISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFR 652

Query: 653 DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            ++ EGI P+  TY  L++  C  G   +A  L  E ++    P+  T S LL
Sbjct: 653 KLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILL 705



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 141/465 (30%), Positives = 244/465 (52%), Gaps = 7/465 (1%)

Query: 184 TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRII-KVLRDNGFSVKAREVYRMMGEFGIKPS 242
           +K + V + L +  +M   G +PD +  N +I  + + +  +  A+ V RM+   G  P 
Sbjct: 257 SKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIR-GFTPD 315

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            +TY  +++  CK G +  A +L + +      P  V +N LI GF  +G L+ A+ ++ 
Sbjct: 316 DITYGYLMNGLCKIGRVDAAKDLFYRIP----KPTSVIFNTLIHGFVTHGRLDDAKAVLS 371

Query: 303 DML-KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
           DM+   G+     +YN +I GY +KGL+  AL +  +M  +G  P + +Y IL+ G CK 
Sbjct: 372 DMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKL 431

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           G++ +A +   EM    + P+ + +N L+  +C+   I EA  +F E+  +   P V T+
Sbjct: 432 GKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTF 491

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           N+LI GLC   +++ A  L  +MI++G++ + +TY  ++N   + G +  AR+  NEM+ 
Sbjct: 492 NSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVF 551

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
           +G   D   Y + I G  + G+  +A  L E+ML  G  P  I+ N+L++GLC+ G +EE
Sbjct: 552 QGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEE 611

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A E  ++MV  G  PD +T+ S+I+     G +  G  +F  +  +G+ P  VTY  L+ 
Sbjct: 612 AVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMS 671

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
                G +  A +   E    G  PN  T++ L+  L     +D+
Sbjct: 672 WLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETLDR 716



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 116/350 (33%), Positives = 205/350 (58%), Gaps = 1/350 (0%)

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
           M+  +GI P + TYN+++  + K+G +  ALE+L +M+ +GC PN  +Y +L+ GF + G
Sbjct: 373 MVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLG 432

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
           ++++A  L+ +M   GLK +   +N +I  + ++  + EA+ +  EM  +G  P + T+N
Sbjct: 433 KIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFN 492

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
            LI GLC+   +  A     +M+ + V+ + ++YNTL+  + R G I EA  L +E+  +
Sbjct: 493 SLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQ 552

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
             +   +TYN+LI GLCR G+++ A+ L E M+  G++P  I+  I++NG C+ G +  A
Sbjct: 553 GSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEA 612

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
            EF  EM+ +G  PD   + + I G  + G   +   +  ++ A+G PPD +TYN L+  
Sbjct: 613 VEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSW 672

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
           LCK G + +A  LL + + DGF+P+  T++ ++ + +    L R R  +N
Sbjct: 673 LCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETLDR-RTFYN 721



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 135/470 (28%), Positives = 227/470 (48%), Gaps = 6/470 (1%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G + S   Y  ++      GE +    LL +M+  G       +  ++  + + G   Q 
Sbjct: 100 GYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPGQT 159

Query: 298 RGLIRDMLKL-GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
             L+ +M  +   + +  SYN ++           A N+  +M++R + PTL T+ +++ 
Sbjct: 160 TRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMK 219

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
            LC    V  A     +M +   +P+ + Y TL++   +   + EA  L +E+     VP
Sbjct: 220 ALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVP 279

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
              T+N +I GLC++  +  A ++   M+ +G  PD ITY  ++NG CK+G +  A++ F
Sbjct: 280 DAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLF 339

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK-GFPPDLITYNVLVHGLCK 535
             + +    P    + T I G +  G   +A  +  +M+   G  PD+ TYN L++G  K
Sbjct: 340 YRIPK----PTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWK 395

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
            G +  A E+LR M   G  P+  +YT ++    ++G +    +L N M   GL P  V 
Sbjct: 396 KGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVG 455

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           +  LI A     R+  A   F EM  KG +P+V T+N+LI+GLC +  I  A  L  DM 
Sbjct: 456 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI 515

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            EG++ N  TY  LIN     G  +EA +L  EM+ +    D  T+++L+
Sbjct: 516 SEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLI 565



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 120/470 (25%), Positives = 214/470 (45%), Gaps = 42/470 (8%)

Query: 258 EMQEALELL-WEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSY 316
           ++  ++EL  W    +G   +   Y VLI     NGE +    L+  M   G+      +
Sbjct: 84  DVSTSMELFSWTGSQKGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLF 143

Query: 317 NPIICGYSEKGLLVEALNLEEEMV-TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
             I+  Y + G   +   L  EM       PT  +YN+++  L        A + F++ML
Sbjct: 144 ISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDML 203

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
                                              SR + PT+ T+  ++  LC   +++
Sbjct: 204 -----------------------------------SRKIPPTLFTFGVVMKALCAVNEVD 228

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            A  +  +M   G +P+ + Y  +++   K   ++ A +   EM   G  PD   +   I
Sbjct: 229 SALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVI 288

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
            G  K    +EA ++   ML +GF PD ITY  L++GLCK+G ++ A +L  ++      
Sbjct: 289 LGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK---- 344

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRK-GLSPTLVTYTVLIHAHAARGRLELAFM 614
           P  + + ++IH  +  G L   + + ++M+   G+ P + TY  LI+ +  +G + LA  
Sbjct: 345 PTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALE 404

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
              +M+ KG +PNV +Y  L++G C+L +ID+AY L  +M  +G+ PN   +  LI+  C
Sbjct: 405 VLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFC 464

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
                 EA+ +++EM  +  +PD  T ++L+    + D   HA+  L  +
Sbjct: 465 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDM 514


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  289 bits (739), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 167/505 (33%), Positives = 260/505 (51%), Gaps = 1/505 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG-FSVKAREVYRMMGEFGIKPSIVTYN 247
           ++  L  FN ML    LP +    +++  +   G +      + + M   G+ P I T +
Sbjct: 75  IDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLS 134

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
            ++D F     +  A  +  +M   G  P+ VT+N LI G  + G+  QA     D    
Sbjct: 135 ILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEAS 194

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           G + + ++Y  II G  + G    A  L ++M   G  P + TYNILI  LCK   V++A
Sbjct: 195 GCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEA 254

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
              F  M  K + PDI +YN+L+ G C      EA  L +E+ S N++P + T+N L+D 
Sbjct: 255 LDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDA 314

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           +C+ G +  AQ + + M   G+ PDV+TY+ ++ G      +  AR+ F+ M+ KG +PD
Sbjct: 315 ICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPD 374

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
            F+Y   I G  K     EA +L  EM+ +G  PD + YN L+HGLC+LG L EA +L +
Sbjct: 375 AFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFK 434

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
            M  +G +PD  TY+ ++    + G L +   LF  M    L P +  Y +LI A    G
Sbjct: 435 NMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFG 494

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
            L+ A   FSE+ V+G+ PNV  Y  +IN LC+   +D+A   F +ME +G  P++++Y 
Sbjct: 495 NLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYN 554

Query: 668 ILINENCNAGNWQEALRLYKEMLDR 692
           ++I       +   A +L  EM DR
Sbjct: 555 VIIRGFLQYKDESRAAQLIGEMRDR 579



 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 148/466 (31%), Positives = 250/466 (53%), Gaps = 1/466 (0%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEA-LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
           P I+ +  +L +  K G+   A + L  +M+  G SP+  T ++LI  FS    ++ A  
Sbjct: 92  PCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFS 151

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
           +   M+KLGL+  A ++N +I G  + G   +A+   ++    G  PT+ TY  +I GLC
Sbjct: 152 VFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLC 211

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
           K G  + A   F +M      P++++YN L+   C+   + EA  +F  ++++ + P + 
Sbjct: 212 KIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIF 271

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
           TYN+LI GLC +   + A  L   M +  I+P++ T+ ++V+  CK G +S A+  F  M
Sbjct: 272 TYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTM 331

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
              G++PD   Y++ + G     +  EA +L + M+ KG  PD  +YN+L+ G CK   +
Sbjct: 332 TEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRI 391

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           +EA +L  +M+  G  PD++ Y ++IH   ++G LR  +DLF NM   G  P L TY++L
Sbjct: 392 DEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSML 451

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           +      G L  AF  F  MQ   ++P++  YN LI+ +C+   +  A  LF ++  +G+
Sbjct: 452 LDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGL 511

Query: 660 LPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           LPN   YT +IN  C  G   EAL  ++ M      PD  +++ ++
Sbjct: 512 LPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVII 557



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 151/465 (32%), Positives = 241/465 (51%)

Query: 203 GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           GL PD+   + +I           A  V+  M + G++P  VT+NT+++  CK G+  +A
Sbjct: 125 GLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQA 184

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
           +E   + +  GC P   TY  +I G  + GE   A GL + M + G + +  +YN +I  
Sbjct: 185 VEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDS 244

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
             +  L+ EAL++   M  + ++P + TYN LI GLC + R  +A     EM   N++P+
Sbjct: 245 LCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPN 304

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
           I ++N L+   C+ G + EA  +F  +    + P VVTY++L+ G     ++  A++L +
Sbjct: 305 IFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFD 364

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            MI +G  PD  +Y I++ G CK   +  A++ FNEM+ +GL PD   Y T I G  +LG
Sbjct: 365 AMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLG 424

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
              EA  L + M + G  PDL TY++L+ G CK G L +A  L R M      PD   Y 
Sbjct: 425 RLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYN 484

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
            +I A  + G+L+  R LF+ +  +GL P +  YT +I+     G L+ A   F  M+  
Sbjct: 485 ILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGD 544

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
           G  P+  +YN +I G  + +   +A  L  +M + G +    T T
Sbjct: 545 GCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAGTTT 589



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 147/459 (32%), Positives = 234/459 (50%), Gaps = 2/459 (0%)

Query: 165 GGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS 224
            GLS    I  L +L+  ++    V+    VF+KM++ GL PD    N +I  L   G  
Sbjct: 124 AGLSP--DIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKF 181

Query: 225 VKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVL 284
            +A E +      G +P++ TY T+++  CK GE   A  L  +M+  GC PN VTYN+L
Sbjct: 182 AQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNIL 241

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           I    ++  + +A  +   M    +     +YN +I G        EA  L  EM +  +
Sbjct: 242 IDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNI 301

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
            P + T+N+L+  +CK G+VS+A+  F  M    V PD+++Y++L+YGY     I EA  
Sbjct: 302 MPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARK 361

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
           LFD + ++   P   +YN LI G C+   ++ A+QL   MI+QG+ PD + Y  +++G C
Sbjct: 362 LFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLC 421

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
           ++G L  A++ F  M   G  PD F Y+  + G  K G   +A+RL   M +    PD+ 
Sbjct: 422 QLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIA 481

Query: 525 TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM 584
            YN+L+  +CK G+L++A +L  ++   G +P+   YT+II+   + G L    + F NM
Sbjct: 482 MYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNM 541

Query: 585 LRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
              G  P   +Y V+I           A     EM+ +G
Sbjct: 542 EGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRG 580



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 126/368 (34%), Positives = 200/368 (54%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F KM   G  P+V   N +I  L  +    +A +++  M    I P I TYN+++   C
Sbjct: 222 LFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLC 281

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
                +EA  LL EM      PN  T+NVL+    + G++ +A+G+ + M ++G++    
Sbjct: 282 NFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVV 341

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +Y+ ++ GYS +  +VEA  L + M+T+G  P   +YNILI G CK  R+ +A+  F EM
Sbjct: 342 TYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEM 401

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           + + + PD ++YNTL++G C+ G + EA  LF  + S   +P + TY+ L+DG C+ G L
Sbjct: 402 IHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYL 461

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
             A +L   M +  + PD+  Y I+++  CK GNL  AR+ F+E+  +GL P+   YTT 
Sbjct: 462 GKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTI 521

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I    K G   EA      M   G PPD  +YNV++ G  +      A +L+ +M   GF
Sbjct: 522 INNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGF 581

Query: 555 IPDHITYT 562
           + +  T T
Sbjct: 582 VAEAGTTT 589



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 124/335 (37%), Positives = 188/335 (56%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K  +V + L +F+ M    + PD+   N +I+ L +     +A  +   M    I P+I 
Sbjct: 247 KDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIF 306

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           T+N ++D+ CKEG++ EA  +   M   G  P+ VTY+ L+ G+S   E+ +AR L   M
Sbjct: 307 TFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAM 366

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           +  G K  A SYN +I GY +   + EA  L  EM+ +G+ P    YN LI+GLC+ GR+
Sbjct: 367 ITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRL 426

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            +A+  F  M     +PD+ +Y+ LL G+C+ G +G+AF LF  ++S  L P +  YN L
Sbjct: 427 REAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNIL 486

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           ID +C++G+L+ A++L   +  QG+LP+V  YT ++N  CK G L  A E F  M   G 
Sbjct: 487 IDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGC 546

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
            PD F+Y   I G L+  D S A +L  EM  +GF
Sbjct: 547 PPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGF 581



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 102/206 (49%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           ++L+  Y K   +++   +FN+M+  GL PD  N N +I  L   G   +A+++++ M  
Sbjct: 379 NILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHS 438

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G  P + TY+ +LD FCKEG + +A  L   MQ     P+   YN+LI    + G L+ 
Sbjct: 439 NGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKD 498

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           AR L  ++   GL  +   Y  II    ++GLL EAL     M   G  P   +YN++I 
Sbjct: 499 ARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIR 558

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPD 382
           G  ++   S A     EM  +  + +
Sbjct: 559 GFLQYKDESRAAQLIGEMRDRGFVAE 584



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 92/195 (47%), Gaps = 14/195 (7%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G+  D   + T++  L + G LR A  + +     NMH        G L    +     +
Sbjct: 405 GLTPDNVNYNTLIHGLCQLGRLREAQDLFK-----NMHS------NGNLPDLFTYS---M 450

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL  + K+  + +   +F  M    L PD+   N +I  +   G    AR+++  +   G
Sbjct: 451 LLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQG 510

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           + P++  Y T++++ CKEG + EALE    M+G GC P+  +YNV+I GF +  +  +A 
Sbjct: 511 LLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAA 570

Query: 299 GLIRDMLKLGLKVSA 313
            LI +M   G    A
Sbjct: 571 QLIGEMRDRGFVAEA 585


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  289 bits (739), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 186/620 (30%), Positives = 302/620 (48%), Gaps = 74/620 (11%)

Query: 157 GILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK 216
           G+LD++   G+    ++      ++ Y +   VE+   ++  M+RNG+L DV   + ++ 
Sbjct: 225 GVLDMMKEAGVDP--NVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVA 282

Query: 217 VL-RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGC- 274
            L RD  FS +A  ++R M + G  P+ VTY T++DS  K G  +E L LL EM  RG  
Sbjct: 283 GLCRDGRFS-EAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVV 341

Query: 275 ----------------------------------SPNGVTYNVLITGFSRNGELEQARGL 300
                                             SPNGVTY VLI    +   +++A  +
Sbjct: 342 MDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQV 401

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           + +M +  +  +  +++ +I G+ ++GLL +A   +  M  RG+ P + TY  LI G  K
Sbjct: 402 LLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFK 461

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
           +     A   + +ML + V  +    ++L+ G  ++G I EA  LF +     L    V 
Sbjct: 462 FQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVN 521

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y TLIDGL + GD+  A +  + ++++ +LPD + Y + +N  C +G    A+ F  EM 
Sbjct: 522 YTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMR 581

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
             GL+PD+  Y T I    + G+T++A +L  EM      P+LITYN LV GL   G++E
Sbjct: 582 NMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVE 641

Query: 541 EANELLRKMVGDGFIPDHITYTSI------------------------IHASLEM----- 571
           +A  LL +MV  GF P  +T+  +                        +HA + +     
Sbjct: 642 KAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLL 701

Query: 572 ------GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
                 G  R+   +   ML  G++P  +T+  LI  H     L+ AF  +++M  + I 
Sbjct: 702 QVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNIS 761

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           PN+ T+N L+ GL  + RI +A  + I+ME+ G+ PN  TY IL   +    N  EA+RL
Sbjct: 762 PNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRL 821

Query: 686 YKEMLDREIEPDYCTHSALL 705
           Y EM+ +   P   T++AL+
Sbjct: 822 YCEMVGKGFVPKVSTYNALI 841



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 156/514 (30%), Positives = 245/514 (47%), Gaps = 3/514 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
            EQ LL   +M    + P+V   + +I      G   KA E  RMM E GI P++VTY T
Sbjct: 398 AEQVLL---EMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGT 454

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++D F K      ALE+  +M   G   N    + L+ G  +NG++E+A  L +D    G
Sbjct: 455 LIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSG 514

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           L +   +Y  +I G  + G +  A    +E++ R + P    YN+ I  LC  G+  +A+
Sbjct: 515 LSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAK 574

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               EM    + PD  +YNT++  +CR G   +A  L  E++  ++ P ++TYNTL+ GL
Sbjct: 575 SFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGL 634

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
              G +E A+ L   M++ G  P  +T+  ++    +   L +  +    M+  GL  D 
Sbjct: 635 FGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADI 694

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             Y T +      G T +A  + EEML  G  PD IT+N L+ G CK   L+ A     +
Sbjct: 695 TVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQ 754

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M+     P+  T+ +++     +G +     +   M + GL P  +TY +L   H  +  
Sbjct: 755 MLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSN 814

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
              A   + EM  KG  P V TYNALI+   +   + QA  LF DM++ G+ P   TY I
Sbjct: 815 KVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDI 874

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
           L++      N  E  +  K+M ++   P   T S
Sbjct: 875 LVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLS 908



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 161/594 (27%), Positives = 275/594 (46%), Gaps = 41/594 (6%)

Query: 164 GGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGF 223
           GGG+ + + +   + L+  Y +       L V ++M   GL  DV   N ++      G 
Sbjct: 161 GGGIHA-LDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQ 219

Query: 224 SVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNV 283
              AR V  MM E G+ P++ TY   +  +C+   ++EA +L   M   G   + VT + 
Sbjct: 220 VDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSA 279

Query: 284 LITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG 343
           L+ G  R+G   +A  L R+M K+G   +  +Y  +I   ++ G   E L+L  EMV+RG
Sbjct: 280 LVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRG 339

Query: 344 VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF 403
           V   L TY  L+  L K G+  + +      L  N+ P+ ++Y  L+   C++ N+ EA 
Sbjct: 340 VVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAE 399

Query: 404 LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
            +  E+  +++ P VVT++++I+G  + G L+ A + K  M  +GI P+V+TY  +++G 
Sbjct: 400 QVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGF 459

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
            K      A E +++ML +G++ ++F   + + G  + G   EA  L ++    G   D 
Sbjct: 460 FKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDH 519

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
           + Y  L+ GL K G +  A +  ++++    +PD + Y   I+    +G  +  +     
Sbjct: 520 VNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTE 579

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           M   GL P   TY  +I +H  +G    A     EM++  I+PN+ITYN L+ GL     
Sbjct: 580 MRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGA 639

Query: 644 IDQAYGLFIDMEEEGILPNKYT-----------------------------------YTI 668
           +++A  L  +M   G  P+  T                                   Y  
Sbjct: 640 VEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNT 699

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL-----KQLDKDYKVHA 717
           L+   C  G  ++A  + +EML   I PD  T +AL+L       LD  +  +A
Sbjct: 700 LLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYA 753



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 148/535 (27%), Positives = 244/535 (45%), Gaps = 39/535 (7%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P     N ++  L D+     A  V   M + G+    VT NT+L   C+ G++ +A   
Sbjct: 101 PTTVAYNILLAALSDH---AHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQV-DAAAA 156

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           L +  G   + + + +N LI G+ R G+   A  +   M   GL +    YN ++ G+  
Sbjct: 157 LADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCR 216

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
            G +  A  + + M   GV P +ATY   I   C+   V +A   +  M+R  V+ D+++
Sbjct: 217 AGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVT 276

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
            + L+ G CR G   EA+ LF E+      P  VTY TLID L + G  +    L   M+
Sbjct: 277 LSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMV 336

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
           ++G++ D++TYT +++   K G     ++     L   L P+   YT  I    K  +  
Sbjct: 337 SRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVD 396

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           EA ++  EM  K   P+++T++ +++G  K G L++A E  R M   G  P+ +TY ++I
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLI 456

Query: 566 ---------HASLEM--------------------------GDLRRGRDLFNNMLRKGLS 590
                     A+LE+                          G +     LF +    GLS
Sbjct: 457 DGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLS 516

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
              V YT LI      G +  AF +  E+  + + P+ + YN  IN LC L +  +A   
Sbjct: 517 LDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSF 576

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             +M   G+ P++ TY  +I  +C  G   +AL+L  EM    I+P+  T++ L+
Sbjct: 577 LTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLV 631



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 194/388 (50%), Gaps = 1/388 (0%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           M RN +LPD    N  I  L   G   +A+     M   G+KP   TYNTM+ S C++GE
Sbjct: 546 MDRN-MLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGE 604

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
             +AL+LL EM+     PN +TYN L+ G    G +E+A+ L+ +M+  G   S+ ++  
Sbjct: 605 TAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRR 664

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           ++   S+   L   L++ E M+  G+   +  YN L+  LC  G    A     EML   
Sbjct: 665 VLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSG 724

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
           + PD I++N L+ G+C+S ++  AF  + ++  +N+ P + T+NTL+ GL   G +  A 
Sbjct: 725 IAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAG 784

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
            +   M   G+ P+ +TY I+  G  K  N   A   + EM+ KG  P    Y   I+  
Sbjct: 785 TVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDF 844

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
            K G  ++A  L ++M  +G  P   TY++LV G  ++ +  E  + L+ M   GF P  
Sbjct: 845 TKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSK 904

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLR 586
            T + I  A  + G   + + L  N+ R
Sbjct: 905 GTLSFICRAFSKPGMTWQAQRLLKNLYR 932



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 162/385 (42%), Gaps = 61/385 (15%)

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL--------------VPTV--------- 418
           D  S N LLY +CR   +  A  L    R   +               P V         
Sbjct: 72  DPASLNALLYSHCRLRLLRPAIALLRSSRPTTVAYNILLAALSDHAHAPAVLAEMCKRGV 131

Query: 419 ----VTYNTLIDGLCRYGDLEVAQQL---------------------------------- 440
               VT NTL+ GLCR G ++ A  L                                  
Sbjct: 132 PFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSV 191

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
            + M  QG+  DV+ Y  +V G C+ G +  AR   + M   G+ P+   YT  I    +
Sbjct: 192 ADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCR 251

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
                EA+ L E M+  G   D++T + LV GLC+ G   EA  L R+M   G  P+H+T
Sbjct: 252 TKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVT 311

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           Y ++I +  + G  +    L   M+ +G+   LVTYT L+     +G+ +          
Sbjct: 312 YCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFAL 371

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
              + PN +TY  LI+ LC+   +D+A  + ++MEE+ I PN  T++ +IN     G   
Sbjct: 372 SDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLD 431

Query: 681 EALRLYKEMLDREIEPDYCTHSALL 705
           +A    + M +R I P+  T+  L+
Sbjct: 432 KATEYKRMMKERGINPNVVTYGTLI 456



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 131/284 (46%), Gaps = 17/284 (5%)

Query: 95  RVLNRIREKPR--IALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVC 152
           RVL    +  R  + L    W+    G+  D  V+ T+L++L   G+ R A  V+E    
Sbjct: 664 RVLQACSQSRRLDVILDIHEWM-MNAGLHADITVYNTLLQVLCYHGMTRKATVVLEE--- 719

Query: 153 VNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCN 212
                    ++G G++        + L+L + K S ++     + +ML   + P++   N
Sbjct: 720 ---------MLGSGIAP--DTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFN 768

Query: 213 RIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR 272
            ++  L   G   +A  V   M + G++P+ +TY+ +     K+    EA+ L  EM G+
Sbjct: 769 TLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGK 828

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA 332
           G  P   TYN LI+ F++ G + QA+ L +DM K G+  ++ +Y+ ++ G+S      E 
Sbjct: 829 GFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEV 888

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
               ++M  +G +P+  T + +     K G    A+     + R
Sbjct: 889 KKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNLYR 932



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 88/217 (40%), Gaps = 36/217 (16%)

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII-------HASLEMG 572
           P D  + N L++  C+L  L  A  LLR        P  + Y  ++       HA   + 
Sbjct: 70  PADPASLNALLYSHCRLRLLRPAIALLRSSR-----PTTVAYNILLAALSDHAHAPAVLA 124

Query: 573 DL-RRG--------RDLFNNMLRKGL---------------SPTLVTYTVLIHAHAARGR 608
           ++ +RG          L   + R G                +  ++ +  LI  +   G 
Sbjct: 125 EMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIAGYCRVGD 184

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
              A      M  +G+  +V+ YN L+ G CR  ++D A G+   M+E G+ PN  TYT 
Sbjct: 185 TPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTP 244

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            I   C     +EA  LY+ M+   +  D  T SAL+
Sbjct: 245 FIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALV 281



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/131 (23%), Positives = 70/131 (53%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           D+L   + K+S   + + ++ +M+  G +P V   N +I      G   +A+E+++ M +
Sbjct: 803 DILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQK 862

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G+ P+  TY+ ++  + +     E  + L +M+ +G SP+  T + +   FS+ G   Q
Sbjct: 863 RGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQ 922

Query: 297 ARGLIRDMLKL 307
           A+ L++++ ++
Sbjct: 923 AQRLLKNLYRV 933


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  288 bits (738), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 195/651 (29%), Positives = 319/651 (49%), Gaps = 61/651 (9%)

Query: 94  VRVLNRIREKP--RIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVV 151
           V++L+ +R +     ALR F     +P    +  ++  IL  L  SG             
Sbjct: 51  VKLLDSLRSQADDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFD---------- 100

Query: 152 CVNMHGILDVLIGGGLSSCVSIKILDLLLLI--YTKKSMVEQCLLVFNKMLRN-GLLPDV 208
             +M  IL+ +   G     S      L+LI  Y +  + ++ L V + M+ + GL PD 
Sbjct: 101 --DMRKILEDMKNSGCEMGTS----PFLILIESYAQFELQDEILGVVHWMIDDFGLKPDT 154

Query: 209 KNCNRIIKVLRDNGFSVKAREV-YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLW 267
              NR++ +L D G ++K  E+ +  M  +GIKP + T+N ++ + C+  +++ A+ +L 
Sbjct: 155 HFYNRMLNLLVD-GNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLE 213

Query: 268 EMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKG 327
           +M   G  P+  T+  ++ G+   G+L+ A  +   M++ G   S  S N I+ G+ ++G
Sbjct: 214 DMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEG 273

Query: 328 LLVEALNLEEEMVTR-GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISY 386
            + +ALN  +EM  + G  P   T+N L+ GLCK G V  A      ML++   PD+ +Y
Sbjct: 274 RVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTY 333

Query: 387 NTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMIN 446
           N+++ G C+ G + EA    D++ +R+  P  VTYNTLI  LC+   +E A +L   + +
Sbjct: 334 NSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTS 393

Query: 447 QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF----------------- 489
           +GILPDV T+  ++ G C   N  +A E F EM  KG +PD F                 
Sbjct: 394 KGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDE 453

Query: 490 ------------------AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
                              Y T I G  K     EA  + +EM   G   + +TYN L+ 
Sbjct: 454 ALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLID 513

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           GLCK   +E+A++L+ +M+ +G  PD  TY S++      GD+++  D+   M   G  P
Sbjct: 514 GLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEP 573

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
            +VTY  LI      GR+E+A      +Q+KGI      YN +I GL R R+  +A  LF
Sbjct: 574 DIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLF 633

Query: 652 IDM-EEEGILPNKYTYTILINENCNAGN-WQEALRLYKEMLDREIEPDYCT 700
            +M E+    P+  +Y I+    CN G   +EA+    E+L++   P++ +
Sbjct: 634 REMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSS 684



 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 146/508 (28%), Positives = 244/508 (48%), Gaps = 49/508 (9%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P    Y  +L    + G   +  ++L +M+  GC      + +LI  +++    ++  G+
Sbjct: 81  PEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQDEILGV 140

Query: 301 IRDMLK-LGLKVSAHSYNPIICGYSEKGLLVEALNLE------EEMVTRGVAPTLATYNI 353
           +  M+   GLK   H YN ++       LLV+  NL+       +M   G+ P ++T+N+
Sbjct: 141 VHWMIDDFGLKPDTHFYNRML------NLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNV 194

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           LI  LC+  ++  A     +M    ++PD  ++ T++ GY   G++  A  + +++    
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFG 254

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ-GILPDVITYTIMVNGSCKMGNLSMA 472
              + V+ N ++ G C+ G +E A    + M NQ G  PD  T+  +VNG CK G++  A
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHA 314

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
            E  + ML++G  PD + Y + I+G  KLG+  EA    ++M+ +   P+ +TYN L+  
Sbjct: 315 IEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLIST 374

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           LCK   +EEA EL R +   G +PD  T+ S+I       + R   +LF  M  KG  P 
Sbjct: 375 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPD 434

Query: 593 LVTYTVLIHAHAARGRLELAFMY-----------------------------------FS 617
             TY +LI +  ++G+L+ A                                      F 
Sbjct: 435 EFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFD 494

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
           EM+V G+  N +TYN LI+GLC+ RR++ A  L   M  EG  P+K+TY  L+   C  G
Sbjct: 495 EMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGG 554

Query: 678 NWQEALRLYKEMLDREIEPDYCTHSALL 705
           + ++A  + + M     EPD  T+  L+
Sbjct: 555 DIKKAADIVQAMTSNGCEPDIVTYGTLI 582



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 153/501 (30%), Positives = 242/501 (48%), Gaps = 38/501 (7%)

Query: 87  VSDPELLVRVLNRIRE-KPRIALRFFRWVETQP--GVKRDEFVFCTILEILIESGLLRSA 143
           VS   +L++ L R  + +P I +     +E  P  G+  DE  F TI++  IE G L  A
Sbjct: 189 VSTFNVLIKALCRAHQLRPAILM-----LEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGA 243

Query: 144 YWVVETVV---CVNMHGILDVLIGGGLSSCVSIKILDLLLLI-------------YT--- 184
             + E +V   C   +  ++V++ G    C   ++ D L  I             YT   
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHG---FCKEGRVEDALNFIQEMSNQDGFFPDQYTFNT 300

Query: 185 ------KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
                 K   V+  + + + ML+ G  PDV   N +I  L   G   +A E    M    
Sbjct: 301 LVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRD 360

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
             P+ VTYNT++ + CKE +++EA EL   +  +G  P+  T+N LI G         A 
Sbjct: 361 CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAM 420

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L  +M   G +    +YN +I     KG L EALN+ ++M   G A ++ TYN LI G 
Sbjct: 421 ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGF 480

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           CK  ++ +A   F EM    V  + ++YNTL+ G C+S  + +A  L D++      P  
Sbjct: 481 CKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDK 540

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
            TYN+L+   CR GD++ A  + + M + G  PD++TY  +++G CK G + +A +    
Sbjct: 541 FTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRS 600

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG-FPPDLITYNVLVHGLCKLG 537
           +  KG+     AY   I G  +   T+EA  L  EML +    PD ++Y ++  GLC  G
Sbjct: 601 IQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGG 660

Query: 538 S-LEEANELLRKMVGDGFIPD 557
             + EA + L +++  GF+P+
Sbjct: 661 GPIREAVDFLVELLEKGFVPE 681



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 186/389 (47%), Gaps = 8/389 (2%)

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR----SGNIG 400
           +P  A Y  ++  L + G   D R    +M           +  L+  Y +       +G
Sbjct: 80  SPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQDEILG 139

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
               + D+     L P    YN +++ L    +L++ +     M   GI PDV T+ +++
Sbjct: 140 VVHWMIDDF---GLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLI 196

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
              C+   L  A     +M   GL PD   +TT + G ++ GD   A R++E+M+  G  
Sbjct: 197 KALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCS 256

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVG-DGFIPDHITYTSIIHASLEMGDLRRGRD 579
              ++ NV+VHG CK G +E+A   +++M   DGF PD  T+ ++++   + G ++   +
Sbjct: 257 WSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIE 316

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
           + + ML++G  P + TY  +I      G ++ A  +  +M  +   PN +TYN LI+ LC
Sbjct: 317 IMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLC 376

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
           +  ++++A  L   +  +GILP+  T+  LI   C   N + A+ L++EM  +  EPD  
Sbjct: 377 KENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEF 436

Query: 700 THSALLLKQLDKDYKVHAVEYLESLTLGA 728
           T++ L+     K     A+  L+ + L  
Sbjct: 437 TYNMLIDSLCSKGKLDEALNMLKQMELSG 465


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  288 bits (738), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 167/501 (33%), Positives = 259/501 (51%), Gaps = 5/501 (0%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P  K+ N ++++L        A  V+  M   GI P++ T+  ++ +FC   E+  A  L
Sbjct: 163 PTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSL 222

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           L +M   GC PN + Y +LI   S N  + +A  L+ +M  +G +    ++N +I G  +
Sbjct: 223 LRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCK 282

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
            G + EA  L + M+ R           L++GLC+ G+V +AR     ML K   P+ + 
Sbjct: 283 AGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEAR----AMLSKIPNPNTVL 338

Query: 386 YNTLLYGYCRSGNIGEAF-LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
           YNTL+ GY  SG   EA  LL+  +      P   T+N +IDGLC+ G L  A +  + M
Sbjct: 339 YNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEM 398

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
           + +G  P+VITYTI+++G CK G+   A +  N M  KGL  +   Y   I    K G  
Sbjct: 399 VKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKI 458

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
            +A ++  EM +KG  PD+ T+N L++GLCK   +EEA  L R M+ +G I + +TY ++
Sbjct: 459 QDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTL 518

Query: 565 IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
           IHA L +  +++   L   M  +G     +TY  LI A    G  E       +M  + I
Sbjct: 519 IHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEI 578

Query: 625 RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
            P++ + N LIN  CR  +++ A     DM + G+ P+  TY  LIN  C  G +QEAL 
Sbjct: 579 FPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALN 638

Query: 685 LYKEMLDREIEPDYCTHSALL 705
           L+  +  + I PD  T++ L+
Sbjct: 639 LFNGLQAKGIHPDAVTYNTLI 659



 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 159/480 (33%), Positives = 249/480 (51%), Gaps = 5/480 (1%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
            R +  M G +  +P+  +YN +L+        + A  + ++M  RG SP   T+ V++ 
Sbjct: 149 TRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMK 208

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
            F    E++ A  L+RDM K G   ++  Y  +I   SE   + EA+ L EEM   G  P
Sbjct: 209 AFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEP 268

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
            + T+N +I+GLCK GR+ +A      ML ++   D +    L++G CR G + EA  + 
Sbjct: 269 DVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAML 328

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ-LKENMINQGILPDVITYTIMVNGSCK 465
            ++ +    P  V YNTLI+G    G  E A+  L +NM+  G  PD  T+ IM++G CK
Sbjct: 329 SKIPN----PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCK 384

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
            G L  A EF +EM++KG +P+   YT  I G  K G   EA ++   M AKG   + + 
Sbjct: 385 KGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVG 444

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           YN L+  LCK G +++A ++  +M   G  PD  T+ S+I+   +   +     L+ +ML
Sbjct: 445 YNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDML 504

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
            +G+    VTY  LIHA      ++ A     EM+ +G   + ITYN LI  LC+    +
Sbjct: 505 LEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATE 564

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +  GL   M  E I P+  +  ILIN  C  G   +AL+  ++M+ R + PD  T+++L+
Sbjct: 565 KCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLI 624



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 147/484 (30%), Positives = 246/484 (50%), Gaps = 5/484 (1%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V+    +   M ++G +P+      +I  L +N    +A ++   M   G +P + T+N 
Sbjct: 216 VDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFND 275

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++   CK G + EA +L   M  R  + + +    L+ G  R G++++AR ++  +    
Sbjct: 276 VIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPN 335

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNL-EEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
             +    YN +I GY   G   EA +L  + MV  G  P   T+NI+I GLCK G +  A
Sbjct: 336 TVL----YNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSA 391

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
                EM++K   P++I+Y  L+ G+C+ G+  EA  + + + ++ L    V YN LI  
Sbjct: 392 LEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGA 451

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           LC+ G ++ A Q+   M ++G  PD+ T+  ++ G CK   +  A   + +ML +G+  +
Sbjct: 452 LCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIAN 511

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              Y T I   L+L    +A +L  EM  +G P D ITYN L+  LCK G+ E+   L+ 
Sbjct: 512 TVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIE 571

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
           +M G+   P   +   +I++    G +        +M+++GL+P +VTY  LI+     G
Sbjct: 572 QMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMG 631

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
           R + A   F+ +Q KGI P+ +TYN LI+  C     + A  L       G +PN+ T++
Sbjct: 632 RFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWS 691

Query: 668 ILIN 671
           ILIN
Sbjct: 692 ILIN 695



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 143/466 (30%), Positives = 233/466 (50%), Gaps = 6/466 (1%)

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
           S   Y  ++D     GE +   +LL +M+  GC      + +++  + + G   QA  L+
Sbjct: 93  SFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLL 152

Query: 302 RDMLKL-GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
            DM  +   + +  SYN ++           A N+  +M++RG++PT+ T+ +++   C 
Sbjct: 153 LDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCM 212

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
              V  A     +M +   +P+ I Y  L++    +  + EA  L +E+      P V T
Sbjct: 213 VNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQT 272

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           +N +I GLC+ G +  A +L + M+ +    D +    +++G C+MG +  AR     ML
Sbjct: 273 FNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEAR----AML 328

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYR-LQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
            K   P+   Y T I G +  G   EA   L + M+  GF PD  T+N+++ GLCK G L
Sbjct: 329 SKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYL 388

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
             A E L +MV  GF P+ ITYT +I    + G       + N+M  KGLS   V Y  L
Sbjct: 389 VSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCL 448

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           I A    G+++ A   + EM  KG +P++ T+N+LI GLC+  ++++A GL+ DM  EG+
Sbjct: 449 IGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGV 508

Query: 660 LPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           + N  TY  LI+        Q+A +L  EM  R    D  T++ L+
Sbjct: 509 IANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLI 554



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 109/353 (30%), Positives = 183/353 (51%)

Query: 194 LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
           L++  M+  G  PD    N +I  L   G+ V A E    M + G +P+++TY  ++D F
Sbjct: 358 LLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGF 417

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           CK+G  +EA +++  M  +G S N V YN LI    ++G+++ A  +  +M   G K   
Sbjct: 418 CKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDI 477

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
           +++N +I G  +   + EAL L  +M+  GV     TYN LI+   +   +  A     E
Sbjct: 478 YTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGE 537

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M  +    D I+YN L+   C++G   +   L +++    + P++ + N LI+  CR G 
Sbjct: 538 MRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGK 597

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           +  A Q   +MI +G+ PD++TY  ++NG CKMG    A   FN +  KG+ PD   Y T
Sbjct: 598 VNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNT 657

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
            I+     G  ++A +L  + ++ GF P+ IT+++L++   K  S  E   +L
Sbjct: 658 LISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKNNSDSEQFTIL 710



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 101/326 (30%), Positives = 166/326 (50%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           KK  +   L   ++M++ G  P+V     +I      G   +A +V   M   G+  + V
Sbjct: 384 KKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTV 443

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
            YN ++ + CK+G++Q+AL++  EM  +GC P+  T+N LI G  +N ++E+A GL RDM
Sbjct: 444 GYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDM 503

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           L  G+  +  +YN +I  +    L+ +A  L  EM  RG      TYN LI  LCK G  
Sbjct: 504 LLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGAT 563

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
                   +M  + + P I S N L+  +CR+G + +A     ++  R L P +VTYN+L
Sbjct: 564 EKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSL 623

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           I+GLC+ G  + A  L   +  +GI PD +TY  +++  C  G  + A +   + +  G 
Sbjct: 624 INGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGF 683

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRL 510
            P+   ++  I   +K    SE + +
Sbjct: 684 IPNEITWSILINYFVKNNSDSEQFTI 709



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 108/343 (31%), Positives = 174/343 (50%), Gaps = 14/343 (4%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G + D F F  +++ L + G L SA               LD ++  G     ++    +
Sbjct: 367 GFEPDAFTFNIMIDGLCKKGYLVSALE------------FLDEMVKKGFEP--NVITYTI 412

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  + K+   E+   V N M   GL  +    N +I  L  +G    A ++Y  M   G
Sbjct: 413 LIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKG 472

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
            KP I T+N+++   CK  +M+EAL L  +M   G   N VTYN LI  F R   ++QA 
Sbjct: 473 CKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQAD 532

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L+ +M   G  +   +YN +I    + G   + L L E+M    + P++ + NILI   
Sbjct: 533 KLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSF 592

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C+ G+V+DA     +M+++ + PDI++YN+L+ G C+ G   EA  LF+ L+++ + P  
Sbjct: 593 CRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDA 652

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           VTYNTLI   C  G    A QL    ++ G +P+ IT++I++N
Sbjct: 653 VTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILIN 695



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 139/315 (44%), Gaps = 6/315 (1%)

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           R  + +   Y  LID L   G+ ++  +L + M ++G +     + +++    K G    
Sbjct: 88  RGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQ 147

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSE-AYRLQEEMLAKGFPPDLITYNVLV 530
           A     +M         F     +   L  G+  + A  +  +ML++G  P + T+ V++
Sbjct: 148 ATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVM 207

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
              C +  ++ A  LLR M   G +P+ I Y  +IHA  E   +     L   M   G  
Sbjct: 208 KAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCE 267

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           P + T+  +IH     GR+  A      M ++    + +    L++GLCR+ ++D+A  +
Sbjct: 268 PDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAM 327

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRL-YKEMLDREIEPDYCTHSALLLKQL 709
              +      PN   Y  LIN    +G ++EA  L YK M+    EPD  T + ++    
Sbjct: 328 LSKIPN----PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLC 383

Query: 710 DKDYKVHAVEYLESL 724
            K Y V A+E+L+ +
Sbjct: 384 KKGYLVSALEFLDEM 398



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 62/120 (51%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           SI   ++L+  + +   V   L     M++ GL PD+   N +I  L   G   +A  ++
Sbjct: 581 SINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLF 640

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             +   GI P  VTYNT++  +C EG   +A +LL++    G  PN +T+++LI  F +N
Sbjct: 641 NGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKN 700


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  288 bits (738), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 166/510 (32%), Positives = 266/510 (52%), Gaps = 1/510 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG-FSVKAREVYRMMGEFGIKPSIVTYN 247
           ++  L  FN ML    LP +    +++  +   G +      + + M   G+ P+I T +
Sbjct: 73  IDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLS 132

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
             ++ FC+   +     +L ++   G  P  VT+  LI G  + GE  QA  L  DM+  
Sbjct: 133 IFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAK 192

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           G +   ++YN II G  + G    A  L ++M   G  P + TY+ LI  LC+   V++A
Sbjct: 193 GCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEA 252

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
              F  M  K + PDI +Y +L+ G C+     EA  L +E+ S N++P +VT+N L+D 
Sbjct: 253 LDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDT 312

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
            C+ G +  A  + + M   G+ P+V+TY+ ++ G     ++  AR+ F+ M+ KG +P+
Sbjct: 313 FCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPN 372

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
            F+Y   I G  K     EA +L  EM+ +G  P+ ++YN L+HG C+LG L EA +L R
Sbjct: 373 IFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFR 432

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
            M  +G +PD  TY+ ++    + G L +   LF  M    L P LV YT+L+HA    G
Sbjct: 433 NMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSG 492

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
             + A   FSE+ V+G++P+V  Y  +INGLC+   +D+A   F +ME +G  P++ +Y 
Sbjct: 493 NHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYN 552

Query: 668 ILINENCNAGNWQEALRLYKEMLDREIEPD 697
           ++I       +   AL L  EM DR    D
Sbjct: 553 VIIRGLLQHKDESRALLLVGEMRDRGFIAD 582



 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 138/466 (29%), Positives = 252/466 (54%), Gaps = 1/466 (0%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEA-LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
           P I+ +  +L +  K G+  +  + L  +M+  G SPN  T ++ +  F +   ++    
Sbjct: 90  PCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFS 149

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
           ++  ++KLGL+ +  ++  +I G  + G   +A+ L ++MV +G  P + TYN +I GLC
Sbjct: 150 VLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLC 209

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
           K G  + A     +M      P++++Y+TL+   CR   + EA  +F  ++++ + P + 
Sbjct: 210 KIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIF 269

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
           TY +LI GLC++   + A  L   M +  I+PD++T+ ++V+  CK G +S A      M
Sbjct: 270 TYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTM 329

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
              G++P+   Y++ + G     D  EA +L   M+ KG  P++ +YN+L++G CK   +
Sbjct: 330 TEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRI 389

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           +EA +L  +M+  G  P++++Y ++IH   ++G LR  +DLF NM   G  P L TY++L
Sbjct: 390 DEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSIL 449

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           +     +G L  AF  F  MQ   ++PN++ Y  L++ +C+      A  LF ++  +G+
Sbjct: 450 LDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGL 509

Query: 660 LPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            P+   YT +IN  C  G   EAL  ++ M      PD  +++ ++
Sbjct: 510 QPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVII 555



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 150/459 (32%), Positives = 223/459 (48%), Gaps = 37/459 (8%)

Query: 166 GLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSV 225
           GLS   +I  L + +  + +   V+    V  K+++ GL P +     +I  L   G   
Sbjct: 123 GLSP--NIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFA 180

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           +A E++  M   G +P + TYNT+++  CK GE   A  LL +M+  GC PN VTY+ LI
Sbjct: 181 QAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLI 240

Query: 286 TGFSRN-----------------------------------GELEQARGLIRDMLKLGLK 310
               R+                                      ++A  L+ +M  L + 
Sbjct: 241 DSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIM 300

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
               ++N ++  + ++G + EAL + + M   GV P + TY+ L+YG   W  V +AR  
Sbjct: 301 PDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKL 360

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
           F  M+ K   P+I SYN L+ GYC++  I EA  LF+E+  + L P  V+YNTLI G C+
Sbjct: 361 FHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQ 420

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
            G L  AQ L  NM   G LPD+ TY+I+++G CK G L  A   F  M    L+P+   
Sbjct: 421 LGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVM 480

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           YT  +    K G+  +A +L  E+  +G  P +  Y  +++GLCK G L+EA E  R M 
Sbjct: 481 YTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNME 540

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
            DG  PD I+Y  II   L+  D  R   L   M  +G 
Sbjct: 541 ADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGF 579


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  288 bits (736), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 178/613 (29%), Positives = 306/613 (49%), Gaps = 11/613 (1%)

Query: 108 LRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSA--YWVVETVVCVNMHGI------L 159
           ++FF W+  +P  K +   F ++L  L+   +   A    ++    C N   I      L
Sbjct: 92  IQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFL 151

Query: 160 DVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLR 219
           + + G G     S+   + LL+   K  MVE    ++ +ML +G+ P +   N +I +L 
Sbjct: 152 NEISGMGFG--FSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILS 209

Query: 220 DNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGV 279
             G   +A  +   + ++ + P + TY +++   C+   +  A  +   M   GC PN V
Sbjct: 210 KKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSV 269

Query: 280 TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
           TY+ LI G    G +++A  ++ +M++ G++ + ++Y   I          EA+ L   M
Sbjct: 270 TYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARM 329

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
             RG  P + TY  LI GL + G++  A   + +ML++ ++P+ ++YN L+   C  G  
Sbjct: 330 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRF 389

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
             A  +F  +     +    TYN +I GLC  GD+E A  L E M+  G LP V+TY  +
Sbjct: 390 STALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTL 449

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           +NG    GN++ A    + M   G +PD + Y   ++G  K G    A    +EM+  G 
Sbjct: 450 INGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGL 509

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
            P+ ++Y  L+ G  K G ++ A  LL++M   G  P+  +Y ++I+   +         
Sbjct: 510 NPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEK 569

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
           + + M+ +GL P ++TYT LI      GR + AF  F +M+ +   PN+ TY++LI GLC
Sbjct: 570 ICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLC 629

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
           +  + D+A  L  +ME +G+ P++ T+T LI+     G    A  L + M+D   +P+Y 
Sbjct: 630 QEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYR 689

Query: 700 THSALLLKQLDKD 712
           T+S +LLK L K+
Sbjct: 690 TYS-VLLKGLQKE 701



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 163/306 (53%)

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
           ++ + NTL+  L ++  +E A+ L + M+N GI P ++T+  ++N   K G +  A    
Sbjct: 162 SLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELIL 221

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           +++ +  L PD F YT+ I G  +  +   A+ + + M+ +G  P+ +TY+ L++GLC  
Sbjct: 222 SQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNE 281

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G ++EA ++L +M+  G  P   TYT  I A   +       +L   M ++G  P + TY
Sbjct: 282 GRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTY 341

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
           T LI   +  G+LE+A   + +M  +G+ PN +TYNALIN LC   R   A  +F  ME 
Sbjct: 342 TALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEG 401

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVH 716
            G L N  TY  +I   C  G+ ++A+ L+++ML     P   T++ L+   L K    +
Sbjct: 402 HGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNN 461

Query: 717 AVEYLE 722
           A   L+
Sbjct: 462 AARLLD 467



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 89/156 (57%), Gaps = 5/156 (3%)

Query: 184 TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
           +K++   +   + +KM+  GLLP+V     +I  L  NG +  A +++  M +    P++
Sbjct: 559 SKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNL 618

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
            TY++++   C+EG+  EA  LL EM+ +G +P+ VT+  LI GF   G ++ A  L+R 
Sbjct: 619 YTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRR 678

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
           M+ +G K +  +Y+ ++     KGL  E L LEE++
Sbjct: 679 MVDMGCKPNYRTYSVLL-----KGLQKECLLLEEKI 709


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 183/621 (29%), Positives = 308/621 (49%), Gaps = 10/621 (1%)

Query: 105  RIALRFFRWVETQPG--VKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVL 162
            R+AL+F +WV  QPG  +K    ++C    IL+++ +  SA  ++  +      GI    
Sbjct: 842  RLALKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLC---QMGIGSKS 898

Query: 163  IGGGLSS----CVSI-KILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
            I G L      C SI  + DLL+ +Y K+ M++  +  F  +   G  P V  CN I+  
Sbjct: 899  IFGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILAS 958

Query: 218  LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
            +  +  +     ++R M + GI P++ T+N +++  C EG +++A  LL +M+  G  P 
Sbjct: 959  MVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPT 1018

Query: 278  GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
             VTYN L+  + + G  + A  LI  M+  G++    +YN  I          +A  L +
Sbjct: 1019 IVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLK 1078

Query: 338  EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
            +M    ++P   TYN LI G  K G++  A   F EM + ++ P+ ++YN L+ G+C  G
Sbjct: 1079 KMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVG 1138

Query: 398  NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
            +  EA  L D + +  L    VTY TL++GLC++   E+A++L E M    ++   I YT
Sbjct: 1139 DFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYT 1198

Query: 458  IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
            ++++G CK G L  A +    M + G+ PD   Y++ I G  ++G+   A  +   M   
Sbjct: 1199 VLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRS 1258

Query: 518  GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
            G   + I Y+ L++  C+ G++ EA ++   M  +G   DH T   ++ +    G L   
Sbjct: 1259 GLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEA 1318

Query: 578  RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
                 +M R GL P  +TY  +I+ + + G    AF +F +M   G  P+  TY +L+ G
Sbjct: 1319 EKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKG 1378

Query: 638  LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
            LC+   + +A      +       +   Y  L+ E C +GN  EA+ L+ +M+   + PD
Sbjct: 1379 LCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPD 1438

Query: 698  YCTHSALLLKQLDKDYKVHAV 718
              T+S+LL     K   V AV
Sbjct: 1439 SYTYSSLLTGLCRKGKAVTAV 1459



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 154/627 (24%), Positives = 268/627 (42%), Gaps = 106/627 (16%)

Query: 185  KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
            K  M+++ + +   M ++G+ PDV   + +I      G    A+E+   M   G+  + +
Sbjct: 1206 KNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKI 1265

Query: 245  TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
             Y+T++ +FC+ G + EA+++   M   G   +  T NVL++   R+G+L +A   +  M
Sbjct: 1266 IYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHM 1325

Query: 305  LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
             ++GL  ++ +Y+ II GY   G  + A +  ++M+  G  P+  TY  L+ GLCK G +
Sbjct: 1326 SRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNL 1385

Query: 365  SDAR-------------------------------HR----FFEMLRKNVIPDIISYNTL 389
             +A+                               H     F +M++ NV+PD  +Y++L
Sbjct: 1386 VEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSL 1445

Query: 390  LYGYCRSGNIGEAFLLFDELRSR-NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
            L G CR G    A  LF     R  L P  V Y  L+DGL + G  + A    E M+ +G
Sbjct: 1446 LTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKG 1505

Query: 449  ILPDVITYTIMVNGSCKMGNLSMAREFFNEM----------------------------- 479
              PD + +  +++   + G +  A +FF+ M                             
Sbjct: 1506 TCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYL 1565

Query: 480  ------LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
                  +R+G+ PD+  + + I G  K G      +L  +M+ +G   D  T+N+L++  
Sbjct: 1566 SLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKY 1625

Query: 534  CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
             + G + +A +L+  M   G  PD  TY  I +   +    R    + + ML  G+ P  
Sbjct: 1626 SESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKH 1685

Query: 594  VTYTVLIHAHAARGRLELAFMYFSEMQVKG------------------------------ 623
              Y  LI+     G ++ AF    EM+  G                              
Sbjct: 1686 AQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDH 1745

Query: 624  -----IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGN 678
                 + P + T+  L++  CR  +I +A  L   ME  G+  +   Y +LI   C  G+
Sbjct: 1746 MLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGD 1805

Query: 679  WQEALRLYKEMLDREIEPDYCTHSALL 705
               A  LY+EM  R++ P+  T++ L+
Sbjct: 1806 SAAAFELYEEMRHRDLCPNITTYAVLV 1832



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 134/498 (26%), Positives = 231/498 (46%), Gaps = 1/498 (0%)

Query: 196  FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
            F+ M++ G  P       ++K L   G  V+A++    +         V YNT+L   CK
Sbjct: 1357 FDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCK 1416

Query: 256  EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
             G + EA+ L  +M      P+  TY+ L+TG  R G+   A  L    +  G     H 
Sbjct: 1417 SGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHV 1476

Query: 316  -YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
             Y  ++ G S+ G    A    EEM+ +G  P    +N +I    + G++  A   F  M
Sbjct: 1477 MYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTM 1536

Query: 375  LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
                V P++ +YN LL+G+ +   +     L+  +    + P  +T+++LI GL + G  
Sbjct: 1537 RWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIP 1596

Query: 435  EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
            ++  +L   MI +G L D  T+ I++N   + G +  A +  N M   G+ PDR  Y   
Sbjct: 1597 DLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHI 1656

Query: 495  IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
              G  K     E+  +  EML  G  P    Y  L++G+C++G ++ A +L  +M   GF
Sbjct: 1657 FNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGF 1716

Query: 555  IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
                +  ++++   L  G       + ++MLR  L PT+ T+T L+H      ++  A  
Sbjct: 1717 GSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALK 1776

Query: 615  YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
                M++ G++ +V+ YN LI G+C       A+ L+ +M    + PN  TY +L++   
Sbjct: 1777 LKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAIS 1836

Query: 675  NAGNWQEALRLYKEMLDR 692
             A N  +  +L  ++ +R
Sbjct: 1837 AANNLIQGEKLLTDLQER 1854



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 124/436 (28%), Positives = 205/436 (47%), Gaps = 1/436 (0%)

Query: 226  KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGC-SPNGVTYNVL 284
            +A  ++  M +  + P   TY+++L   C++G+   A+ L     GRG   PN V Y  L
Sbjct: 1422 EAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCL 1481

Query: 285  ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
            + G S+ G  + A     +M+K G      ++N II   S +G +++A +    M   GV
Sbjct: 1482 VDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGV 1541

Query: 345  APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
             P LATYNIL++G  K   +      +  M+R+ + PD +++++L+ G  +SG       
Sbjct: 1542 CPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVK 1601

Query: 405  LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
            L  ++     +    T+N LI+     G +  A  L   M   G+ PD  TY  + NG  
Sbjct: 1602 LLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLN 1661

Query: 465  KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
            K      +    +EML  G+ P    Y T I G  ++GD   A++L++EM A GF    +
Sbjct: 1662 KKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEV 1721

Query: 525  TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM 584
              + +V GL   G  E+A  +L  M+    +P   T+T+++H       +     L   M
Sbjct: 1722 AESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVM 1781

Query: 585  LRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRI 644
               GL   +V Y VLI    A G    AF  + EM+ + + PN+ TY  L++ +     +
Sbjct: 1782 ELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNL 1841

Query: 645  DQAYGLFIDMEEEGIL 660
             Q   L  D++E G++
Sbjct: 1842 IQGEKLLTDLQERGLI 1857



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 175/360 (48%)

Query: 196  FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
            F +M++ G  PD    N II      G  +KA + +  M  +G+ P++ TYN +L  F K
Sbjct: 1498 FEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSK 1557

Query: 256  EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
            +  +   L L   M   G  P+ +T++ LI G S++G  +    L+  M+  G      +
Sbjct: 1558 KQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFT 1617

Query: 316  YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
            +N +I  YSE G + +A +L   M T GV P   TYN +  GL K     ++     EML
Sbjct: 1618 FNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEML 1677

Query: 376  RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
               VIP    Y TL+ G CR G+I  AF L DE+ +       V  + ++ GL   G  E
Sbjct: 1678 ENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTE 1737

Query: 436  VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
             A  + ++M+   +LP + T+T +++  C+   ++ A +    M   GL+ D  AY   I
Sbjct: 1738 DAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLI 1797

Query: 496  AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
             G    GD++ A+ L EEM  +   P++ TY VLV  +    +L +  +LL  +   G I
Sbjct: 1798 MGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGLI 1857



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 199/447 (44%), Gaps = 36/447 (8%)

Query: 179  LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMGEF 237
            LL    K   + + + +F+KM++N +LPD    + ++  L   G +V A  ++   MG  
Sbjct: 1410 LLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRG 1469

Query: 238  GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
             + P+ V Y  ++D   K G  + A     EM  +G  P+ V +N +I   SR G++ +A
Sbjct: 1470 TLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKA 1529

Query: 298  RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
                  M   G+  +  +YN ++ G+S+K  L+  L+L   M+  G+ P   T++ LI G
Sbjct: 1530 NDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILG 1589

Query: 358  LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
            L K G          +M+ +  + D  ++N L+  Y  SG + +AF L + + +  + P 
Sbjct: 1590 LSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPD 1649

Query: 418  VVTYN-----------------------------------TLIDGLCRYGDLEVAQQLKE 442
              TYN                                   TLI+G+CR GD++ A +LK+
Sbjct: 1650 RDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKD 1709

Query: 443  NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
             M   G     +  + MV G    G    A    + MLR  L P    +TT +    +  
Sbjct: 1710 EMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDA 1769

Query: 503  DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
              +EA +L+  M   G   D++ YNVL+ G+C  G    A EL  +M      P+  TY 
Sbjct: 1770 KIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYA 1829

Query: 563  SIIHASLEMGDLRRGRDLFNNMLRKGL 589
             ++ A     +L +G  L  ++  +GL
Sbjct: 1830 VLVDAISAANNLIQGEKLLTDLQERGL 1856



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 113/240 (47%)

Query: 176  LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
             ++L+  Y++   + +   + N M   G+ PD    N I   L       ++  V   M 
Sbjct: 1618 FNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEML 1677

Query: 236  EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
            E G+ P    Y T+++  C+ G++Q A +L  EM+  G   + V  + ++ G    G+ E
Sbjct: 1678 ENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTE 1737

Query: 296  QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
             A  ++  ML++ L  +  ++  ++  +     + EAL L+  M   G+   +  YN+LI
Sbjct: 1738 DAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLI 1797

Query: 356  YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
             G+C  G  + A   + EM  +++ P+I +Y  L+     + N+ +   L  +L+ R L+
Sbjct: 1798 MGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGLI 1857


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 166/555 (29%), Positives = 285/555 (51%), Gaps = 38/555 (6%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+L + +    +  + + N+M+  G +P     + ++  LR  G    A ++   +G FG
Sbjct: 294 LVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFG 353

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWE-MQGRGCSPNGVTYNVLITGFSRNGELEQA 297
             P++  YN ++++ CK GE  +  ELL++ M       N VTY++LI  F + G L+ A
Sbjct: 354 FLPNLFVYNALINALCK-GEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVA 412

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
                 M++ G++ + + YN +I G+ + G L  A  L  +M+  G+ PT  T+  LI G
Sbjct: 413 ESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISG 472

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
            CK  +V  A   + EM  K + P + ++  L+YG C +  + EA  LFDE+  R + PT
Sbjct: 473 YCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPT 532

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
            VTYN +I+G C+  +++ A +L E+M++ G++PD  TY  +++G C  G +S A++F +
Sbjct: 533 EVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFID 592

Query: 478 -----------------------------------EMLRKGLQPDRFAYTTQIAGELKLG 502
                                              EM+++G+  D   +   I G +K  
Sbjct: 593 DLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQ 652

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
           D    + L ++M  +G  PD + Y  ++    K GS +++ E L  MV +   P+ +TYT
Sbjct: 653 DMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYT 712

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
           + ++   ++G++ R   LF  ML   +SP  VTY   + +    G ++ A     EM +K
Sbjct: 713 AFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEM-LK 771

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
           G+  N  TYN LI G C+L R+ +A  +  +M E GI P+  TY+ +I E+C +G+   A
Sbjct: 772 GLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAA 831

Query: 683 LRLYKEMLDREIEPD 697
           + L+  ML + +EPD
Sbjct: 832 VELWDTMLRKGVEPD 846



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 145/511 (28%), Positives = 267/511 (52%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           VF++ +  G+ PD   C+ +I+ L +     +A+E    M       SIVTYN ++   C
Sbjct: 205 VFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLC 264

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K G + EALE+   ++ +G   + VTY  L+ GF R  + +    L+ +M++LG   +  
Sbjct: 265 KGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEA 324

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           + + ++ G  +KG +  A +L  ++   G  P L  YN LI  LCK   +  A   +  M
Sbjct: 325 AVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNM 384

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
              N+  + ++Y+ L+  +C+ G +  A   F  +    +  T+  YN+LI+G C++GDL
Sbjct: 385 HSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDL 444

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
             A+ L   MIN+G+ P   T+T +++G CK   +  A + + EM  K + P  + +T  
Sbjct: 445 SAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTAL 504

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I G     + +EA +L +EM+ +   P  +TYNV++ G CK  ++++A ELL  M+ +G 
Sbjct: 505 IYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGL 564

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
           +PD  TY  +I      G +   +D  +++ +K L    + Y+ L+H +  +GRL  A  
Sbjct: 565 VPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALS 624

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
              EM  +GI  +++ +  LI+G  + + + + +GL   M ++G+ P+   YT +I+   
Sbjct: 625 ASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYS 684

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             G+++++      M+  +  P+  T++A +
Sbjct: 685 KEGSFKKSGECLDLMVTEKCFPNVVTYTAFM 715



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 170/623 (27%), Positives = 300/623 (48%), Gaps = 11/623 (1%)

Query: 90  PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVET 149
           P  + +VL       ++ALRFF ++     +      F  ++  L+++ L   A  ++ T
Sbjct: 62  PHHVEQVLINTLHDSKLALRFFNFLGLHKNMNHTTTSFAILVHALVQNKLFWPANSLLHT 121

Query: 150 VVCVN------MHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNG 203
           ++             L+       SS +     D L+  Y + + V   ++V   ML N 
Sbjct: 122 LLLRGSDPKFVFEKFLESHKQCKFSSTLG---FDFLVHSYLQNTRVFDAVVVLRLMLGNT 178

Query: 204 LLPDVKNCNRIIK-VLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           LLP+V+  + I+  +LR   F +   EV+      G+KP   T + ++ S C+  +   A
Sbjct: 179 LLPEVRTLSAILNGLLRIRKF-ILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDFCRA 237

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
            E +  M+      + VTYNVLI G  + G + +A  + + + + GLK    +Y  ++ G
Sbjct: 238 KEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLG 297

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
           +       + + L  EMV  G  PT A  + L+ GL K G +  A     ++ R   +P+
Sbjct: 298 FCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPN 357

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
           +  YN L+   C+  ++ +A LL+  + S NL    VTY+ LID  C+ G L+VA+    
Sbjct: 358 LFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFG 417

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            MI  GI   +  Y  ++NG CK G+LS A   + +M+ +GL+P    +TT I+G  K  
Sbjct: 418 RMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDL 477

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
              +A++L  EM  K   P + T+  L++GLC    + EA++L  +MV     P  +TY 
Sbjct: 478 QVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYN 537

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
            +I    +  ++ +  +L  +ML  GL P   TY  LI    + GR+  A  +  ++  K
Sbjct: 538 VMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKK 597

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
            ++ N + Y+AL++G C   R+ +A     +M + GI  +   + +LI+      + +  
Sbjct: 598 NLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRL 657

Query: 683 LRLYKEMLDREIEPDYCTHSALL 705
             L K+M D+ + PD   +++++
Sbjct: 658 FGLLKKMYDQGLRPDSVIYTSMI 680



 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 158/553 (28%), Positives = 266/553 (48%), Gaps = 62/553 (11%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +L+  + K+ M++     F +M+ +G+   +   N +I      G    A  +Y  M   
Sbjct: 398 ILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINE 457

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G++P+  T+ T++  +CK+ ++++A +L  EM  +  +P+  T+  LI G     E+ +A
Sbjct: 458 GLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEA 517

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L  +M++  +K +  +YN +I GY +   + +A  L E+M+  G+ P   TY  LI G
Sbjct: 518 SKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISG 577

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA--------------- 402
           LC  GRVS A+    ++ +KN+  + + Y+ LL+GYC  G + EA               
Sbjct: 578 LCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMD 637

Query: 403 --------------------FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
                               F L  ++  + L P  V Y ++ID   + G  + + +  +
Sbjct: 638 LVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLD 697

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            M+ +   P+V+TYT  +NG CK+G +  A   F +ML   + P+   Y   +    K G
Sbjct: 698 LMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEG 757

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
           +  EA  L  EML KG   +  TYN+L+ G CKLG L EA ++L +M  +G  PD ITY+
Sbjct: 758 NMKEATDLHHEML-KGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYS 816

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
           +II+     GD+    +L++ MLRKG+ P  V + +LI+     G L+ AF   ++M  +
Sbjct: 817 TIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSR 876

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
           G++P  I          +L++ D     F                 L++  C  G    A
Sbjct: 877 GLKPRQIL---------QLQKRDLGVCNF-----------------LMHGGCVTGEVDTA 910

Query: 683 LRLYKEMLDREIE 695
           LRLY  ML R ++
Sbjct: 911 LRLYHSMLTRAVK 923



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 108/258 (41%), Gaps = 22/258 (8%)

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM-LAKGFPPDLIT 525
           GNLS    F +  +   L+P    +  Q+     L D+  A R    + L K       +
Sbjct: 43  GNLSWKIAFNDPSISSTLKPH---HVEQVLIN-TLHDSKLALRFFNFLGLHKNMNHTTTS 98

Query: 526 YNVLVHGLCKLGSLEEANELLR---------KMVGDGFIPDH--------ITYTSIIHAS 568
           + +LVH L +      AN LL          K V + F+  H        + +  ++H+ 
Sbjct: 99  FAILVHALVQNKLFWPANSLLHTLLLRGSDPKFVFEKFLESHKQCKFSSTLGFDFLVHSY 158

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
           L+   +     +   ML   L P + T + +++      +  L +  F E    G++P+ 
Sbjct: 159 LQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDP 218

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
            T +A+I  LC L+   +A    + ME      +  TY +LI+  C  G   EAL + K 
Sbjct: 219 YTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKS 278

Query: 689 MLDREIEPDYCTHSALLL 706
           + ++ ++ D  T+  L+L
Sbjct: 279 LREKGLKEDVVTYCTLVL 296



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 75/182 (41%), Gaps = 46/182 (25%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V ++M  NG+ PD                                    +TY+T++   C
Sbjct: 799 VLSEMTENGIFPDC-----------------------------------ITYSTIIYEHC 823

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK---- 310
           + G++  A+EL   M  +G  P+ V +N+LI G   NG L++A  L  DML  GLK    
Sbjct: 824 RSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQI 883

Query: 311 VSAHSYNPIICGYSEKGLLV-----EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
           +     +  +C +   G  V      AL L   M+TR V  +L  +  L   L  +G +S
Sbjct: 884 LQLQKRDLGVCNFLMHGGCVTGEVDTALRLYHSMLTRAVKLSLEMWKCLY--LLSYGVIS 941

Query: 366 DA 367
            +
Sbjct: 942 KS 943


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 170/549 (30%), Positives = 284/549 (51%), Gaps = 37/549 (6%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K+  VE+ L +  ++   G+ P++   N +I  L       +A  ++  MG+ G+ P+ V
Sbjct: 344 KRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDV 403

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY+ ++D FC+ G++  AL  L EM   G  P+   YN LI G  + G++  A  L+ +M
Sbjct: 404 TYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEM 463

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           +   L+ +  +Y  ++ GY  KG + +AL L  EM  +G+ P++ T+  L+ GL + G +
Sbjct: 464 INKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLI 523

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            DA   F EM   NV P+ ++YN ++ GYC  GN+ +AF   +E+  + +VP   +Y  L
Sbjct: 524 RDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPL 583

Query: 425 IDGLC-----------------------------------RYGDLEVAQQLKENMINQGI 449
           I GLC                                   R G LE A  + ++M  +G+
Sbjct: 584 IHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGV 643

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
             D++ Y ++++GS K  +  +      EM  +GL+PD   YT+ I  + K GD  EA+ 
Sbjct: 644 DLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFG 703

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA-S 568
           + + M+ +G  P+ +TY  +++GLCK G + EA  L  KM     +P+ +TY   +   +
Sbjct: 704 IWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILT 763

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
             +GD+++  +L N +L KGL     TY +LI     +GR+E A    + M   G+ P+ 
Sbjct: 764 KGVGDMKKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDC 822

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
           ITY  +I+ LCR   + +A  L+  M E+GI P++  Y  LI+  C AG   +A  L  E
Sbjct: 823 ITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNE 882

Query: 689 MLDREIEPD 697
           ML + ++P+
Sbjct: 883 MLRQGLKPN 891



 Score =  287 bits (734), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 172/549 (31%), Positives = 284/549 (51%), Gaps = 37/549 (6%)

Query: 193 LLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDS 252
           L + ++MLR    P     + +++ LR  G   +A  + + + EFG+ P+I  YN ++DS
Sbjct: 317 LEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDS 376

Query: 253 FCKEGEMQEALELLWEMQGR-GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKV 311
            CK     EA ELL++  G+ G  PN VTY++LI  F R G+L+ A   + +M+ +GLK 
Sbjct: 377 LCKGRNFDEA-ELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKP 435

Query: 312 SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRF 371
           S + YN +I G+ + G +  A +L  EM+ + + PT+ TY  L+ G C  G+++ A   +
Sbjct: 436 SVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLY 495

Query: 372 FEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY 431
            EM  K ++P I ++ TLL G  R+G I +A  LF E+   N+ P  VTYN +I+G C  
Sbjct: 496 HEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEE 555

Query: 432 GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAY 491
           G++  A +    MI +GI+PD  +Y  +++G C  G  S A+ F + + +   + +   Y
Sbjct: 556 GNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICY 615

Query: 492 TTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
           T  + G  + G   EA  + ++M  +G   DL+ Y VL+ G  K    +    LL++M  
Sbjct: 616 TGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHD 675

Query: 552 DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLEL 611
            G  PD + YTS+I A  + GD +    +++ M+ +G  P  VTYT +I+     G +  
Sbjct: 676 RGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNE 735

Query: 612 AFMYFSEMQ-----------------------------------VKGIRPNVITYNALIN 636
           A +  S+M+                                   +KG+  N  TYN LI 
Sbjct: 736 AEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLANTATYNMLIR 795

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
           G CR  R+++A  L   M  +G+ P+  TYT +I+E C   + ++A+ L+  M ++ I P
Sbjct: 796 GFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRP 855

Query: 697 DYCTHSALL 705
           D   ++ L+
Sbjct: 856 DRVAYNTLI 864



 Score =  279 bits (714), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 173/648 (26%), Positives = 310/648 (47%), Gaps = 49/648 (7%)

Query: 102 EKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLL--RSAYWVVETVVCVNMHGIL 159
           + P++ LRFF ++    G       FC ++  L+++ L    S+      +  +    + 
Sbjct: 82  DDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVQANLFWPASSLLQTLLLRALKPSEVF 141

Query: 160 DVLIGGGLSSC------VSIKILDLLLLIYTKKSMVEQCLLVFNKML-RNGLLPDVKNCN 212
           D L      SC       S    DLL+  Y +   V   +LVF  M+ +  LLP+V+  +
Sbjct: 142 DALF-----SCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLS 196

Query: 213 RIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR 272
            ++  L        A E++  M   GI+P +  Y  ++ S C+  ++  A E++ +M+  
Sbjct: 197 ALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEAT 256

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE------- 325
           GC  N V YNVLI G  +  ++ +A G+ +D+    LK    +Y  ++CG  +       
Sbjct: 257 GCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVG 316

Query: 326 ----------------------------KGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
                                       +G + EALNL + +   GV+P +  YN LI  
Sbjct: 317 LEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDS 376

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           LCK     +A   F  M +  + P+ ++Y+ L+  +CR G +  A     E+    L P+
Sbjct: 377 LCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPS 436

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           V  YN+LI+G C++GD+  A+ L   MIN+ + P V+TYT ++ G C  G ++ A   ++
Sbjct: 437 VYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYH 496

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           EM  KG+ P  + +TT ++G  + G   +A +L  EM      P+ +TYNV++ G C+ G
Sbjct: 497 EMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEG 556

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
           ++ +A E L +M+  G +PD  +Y  +IH     G     +   + + +       + YT
Sbjct: 557 NMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYT 616

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
            L+H     G+LE A     +M ++G+  +++ Y  LI+G  + +      GL  +M + 
Sbjct: 617 GLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDR 676

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           G+ P+   YT +I+     G+++EA  ++  M++    P+  T++A++
Sbjct: 677 GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVI 724



 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 177/591 (29%), Positives = 286/591 (48%), Gaps = 37/591 (6%)

Query: 171 VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKN-CNRIIKVLRDNGFSVKARE 229
           V+I   ++L+    KK  V + + +   +    L PDV   C  +  + +   F V    
Sbjct: 260 VNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEM 319

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           +  M+      PS    +++++   K G+++EAL L+  +   G SPN   YN LI    
Sbjct: 320 IDEML-RLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLC 378

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           +    ++A  L   M K+GL  +  +Y+ +I  +  +G L  AL+   EM+  G+ P++ 
Sbjct: 379 KGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVY 438

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
            YN LI G CK+G +S A     EM+ K + P +++Y +L+ GYC  G I +A  L+ E+
Sbjct: 439 PYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEM 498

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
             + +VP++ T+ TL+ GL R G +  A +L   M    + P+ +TY +M+ G C+ GN+
Sbjct: 499 TGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNM 558

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
           S A EF NEM+ KG+ PD ++Y   I G    G  SEA    + +       + I Y  L
Sbjct: 559 SKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGL 618

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           +HG C+ G LEEA  + + M   G   D + Y  +I  SL+  D +    L   M  +GL
Sbjct: 619 LHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGL 678

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA-- 647
            P  V YT +I A +  G  + AF  +  M  +G  PN +TY A+INGLC+   +++A  
Sbjct: 679 KPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEI 738

Query: 648 ----------------YGLFIDMEEEGI-----------------LPNKYTYTILINENC 674
                           YG F+D+  +G+                 L N  TY +LI   C
Sbjct: 739 LCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLANTATYNMLIRGFC 798

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
             G  +EA  L   M+   + PD  T++ ++ +   ++    A+E   S+T
Sbjct: 799 RQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMT 849



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 152/508 (29%), Positives = 254/508 (50%), Gaps = 37/508 (7%)

Query: 165 GGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS 224
           G +  C +     +L+ ++ ++  ++  L    +M+  GL P V   N +I      G  
Sbjct: 394 GKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDI 453

Query: 225 VKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVL 284
             A  +   M    ++P++VTY +++  +C +G++ +AL L  EM G+G  P+  T+  L
Sbjct: 454 SAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTL 513

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           ++G  R G +  A  L  +M +  +K +  +YN +I GY E+G + +A     EM+ +G+
Sbjct: 514 LSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGI 573

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA-- 402
            P   +Y  LI+GLC  G+ S+A+     + + N   + I Y  LL+G+CR G + EA  
Sbjct: 574 VPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALS 633

Query: 403 --------------------------------FL-LFDELRSRNLVPTVVTYNTLIDGLC 429
                                           FL L  E+  R L P  V Y ++ID   
Sbjct: 634 VCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKS 693

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
           + GD + A  + + MIN+G +P+ +TYT ++NG CK G ++ A    ++M      P++ 
Sbjct: 694 KTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQV 753

Query: 490 AYTTQIAGELK-LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
            Y   +    K +GD  +A  L   +L KG   +  TYN+L+ G C+ G +EEA+EL+ +
Sbjct: 754 TYGCFLDILTKGVGDMKKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRMEEASELITR 812

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M+GDG  PD ITYT++I       D+++  +L+N+M  KG+ P  V Y  LIH     G 
Sbjct: 813 MIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGE 872

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALIN 636
           +  A    +EM  +G++PN  T    I+
Sbjct: 873 MGKATELRNEMLRQGLKPNTETSETTIS 900



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/430 (26%), Positives = 195/430 (45%), Gaps = 56/430 (13%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHG---ILDVLI 163
           ALR +  + T  G+    + F T+L  L  +GL+R A  +   +   N+       +V+I
Sbjct: 491 ALRLYHEM-TGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMI 549

Query: 164 GGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGF 223
            G                 Y ++  + +     N+M+  G++PD  +   +I  L   G 
Sbjct: 550 EG-----------------YCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQ 592

Query: 224 SVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNV 283
           + +A+     + +   + + + Y  +L  FC+EG+++EAL +  +M  RG   + V Y V
Sbjct: 593 ASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGV 652

Query: 284 LITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG 343
           LI G  ++ + +   GL+++M   GLK     Y  +I   S+ G   EA  + + M+  G
Sbjct: 653 LIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEG 712

Query: 344 VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISY----------------- 386
             P   TY  +I GLCK G V++A     +M   N +P+ ++Y                 
Sbjct: 713 CVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKA 772

Query: 387 ------------------NTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
                             N L+ G+CR G + EA  L   +    + P  +TY T+I  L
Sbjct: 773 VELHNAILKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISEL 832

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           CR  D++ A +L  +M  +GI PD + Y  +++G C  G +  A E  NEMLR+GL+P+ 
Sbjct: 833 CRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNT 892

Query: 489 FAYTTQIAGE 498
               T I+ +
Sbjct: 893 ETSETTISND 902


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 199/702 (28%), Positives = 333/702 (47%), Gaps = 58/702 (8%)

Query: 50  LNPESESYYKELIISTVE-EKPWAFC-NNRWVSDHFQAVVSDPELLVRVLNRIREKPRIA 107
           L+ E++S++  ++   V   + W    NN  +S + +     P  + +VL R  +  R+A
Sbjct: 32  LDNENDSHFVYVLEQIVRGNQSWKIAFNNSSISGNIE-----PHHVEKVLIRTLDDSRLA 86

Query: 108 LRFFRWVETQPGVKRDEFVFCTILEILIESGLL--RSAYWVVETVVCVNMHGILDVLIGG 165
           LRFF ++            FC ++  L+++ L    S+      +  +N H I +     
Sbjct: 87  LRFFNFLGLHRNFHHSTASFCILIHSLLQNNLFWPASSLLQTLLLRGLNPHQIFENFFES 146

Query: 166 ----GLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDN 221
                 SS       D+L+  Y +   V   +LV N M   GLLP+V+  + ++  L   
Sbjct: 147 YKKYKFSSSSG---FDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARI 203

Query: 222 GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY 281
               +  E++  +   G+KP    Y  ++   C+  +  +A E++ + +G GCS + VTY
Sbjct: 204 RKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTY 263

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
           NV I G  ++  + +A  + R + + GLK    +Y  ++ G          + + +EM+ 
Sbjct: 264 NVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIE 323

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK----NVIPDIISYNTLLYGYCRSG 397
            G  P+ A  + LI GL K G +  A    FE+L K     V+P++  YN+++   C++G
Sbjct: 324 LGYVPSEAAVSGLIEGLIKMGSIEGA----FELLNKVGKLGVVPNLFVYNSMINSLCKTG 379

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
            + EA LLF  +  R L P  VTY  LIDG  R   L+VA      MI  GI   V +Y 
Sbjct: 380 KLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYN 439

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
            M+N  CK G + MA   F EM+ KGL+P    YT+ I+G  K G   +A++L  EM  K
Sbjct: 440 SMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGK 499

Query: 518 GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
           G  P+ +T+  L+ GLC++  + EA++L  +MV    +P+ +TY  +I      G+  R 
Sbjct: 500 GIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRA 559

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
            +L + M++KGLSP   TY  LI    + GR+  A  + +++  K  R + + Y AL+ G
Sbjct: 560 FELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQG 619

Query: 638 LCRLRRIDQA----------------------------------YGLFIDMEEEGILPNK 663
            C+  RI +A                                  + L  +M  +G+ P+ 
Sbjct: 620 FCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLREMHGKGMQPDN 679

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             YTILI+    +GN ++A   +  M+     P+  T++AL+
Sbjct: 680 VIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALV 721



 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 197/709 (27%), Positives = 332/709 (46%), Gaps = 101/709 (14%)

Query: 93  LVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVV---ET 149
           L+  L RIR K R  L  F  +    GVK D +++  +++ L E      A  ++   E 
Sbjct: 196 LLNALARIR-KFRQVLELFDTL-VNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEG 253

Query: 150 VVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYT------KKSMVEQCLLVF------- 196
             C       +V I G    C S ++ + + +  +      K  +V  C LV        
Sbjct: 254 NGCSLSIVTYNVFING---LCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQE 310

Query: 197 --------NKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
                   ++M+  G +P     + +I+ L   G    A E+   +G+ G+ P++  YN+
Sbjct: 311 FEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNS 370

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN----------------- 291
           M++S CK G+++EA  L   M  RG +PN VTY +LI GF R                  
Sbjct: 371 MINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECG 430

Query: 292 ------------------GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
                             G+++ A  L ++M+  GLK +  +Y  +I GY + GL+ +A 
Sbjct: 431 ISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAF 490

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
            L  EM  +G+AP   T+  LI GLC+  ++++A   F EM+   ++P+ ++YN L+ G+
Sbjct: 491 KLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGH 550

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL------------- 440
           CR GN   AF L DE+  + L P   TY  LI GLC  G +  A++              
Sbjct: 551 CREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDE 610

Query: 441 ----------------------KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
                                 ++ M+ +G+  D+++Y ++++G+    N  +  E   E
Sbjct: 611 LCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQ-NDRILFELLRE 669

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M  KG+QPD   YT  I G +K G+  +A+     M+ +G+ P+ +TY  LV+GL K G 
Sbjct: 670 MHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGY 729

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           + EA  L ++M+    IP+HITY   +    + G++     L N ML+   + T VTY +
Sbjct: 730 VNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSFANT-VTYNI 788

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           LI  +   G+ + A      M   G+ P+ ITY+  I   C+   +D A  ++  M + G
Sbjct: 789 LIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRG 848

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLK 707
           + P++  +  LI+  C  G    AL+L  +M+ R ++P   T+ +L+++
Sbjct: 849 LKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQ 897



 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 154/498 (30%), Positives = 262/498 (52%), Gaps = 35/498 (7%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + +++ ++     FNKM+  G+   V + N +I      G    A  +++ M + G+KP+
Sbjct: 410 FGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPT 469

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           + TY +++  +CK+G + +A +L  EM G+G +PN VT+  LI G  +  ++ +A  L  
Sbjct: 470 VATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFD 529

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M++L +  +  +YN +I G+  +G    A  L +EM+ +G++P   TY  LI GLC  G
Sbjct: 530 EMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTG 589

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           RVS+A+    ++  K+   D + Y  LL G+C+ G I EA +   E+  R L   +V+Y 
Sbjct: 590 RVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYA 649

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            LI G     D  + + L+E M  +G+ PD + YTI+++G  K GNL  A EF+  M+ +
Sbjct: 650 VLISGALNQNDRILFELLRE-MHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGE 708

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA-------------------------- 516
           G  P+   YT  + G  K G  +EA  L + ML                           
Sbjct: 709 GYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENA 768

Query: 517 --------KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
                   +G   + +TYN+L+ G C++G  +EA +LL  M+G G +PD ITY++ I+  
Sbjct: 769 LQLHNAMLQGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEY 828

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
            + G++    D++  ML++GL P  V +  LIHA    G L+ A    ++M ++G++P  
Sbjct: 829 CKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQ 888

Query: 629 ITYNALINGLCRLRRIDQ 646
            TY++L+  L +  R+ Q
Sbjct: 889 STYHSLMVQLAQRARLTQ 906



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 131/444 (29%), Positives = 216/444 (48%)

Query: 281 YNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV 340
           +++LI  + +N  +     ++  M   GL     + + ++   +      + L L + +V
Sbjct: 158 FDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLV 217

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
             GV P    Y +++  LC+    + A+    +         I++YN  + G C+S  + 
Sbjct: 218 NAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVW 277

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           EA  +   L  + L   +VTY TL+ GLCR  + EV  ++ + MI  G +P     + ++
Sbjct: 278 EAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLI 337

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
            G  KMG++  A E  N++ + G+ P+ F Y + I    K G   EA  L   M  +G  
Sbjct: 338 EGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLN 397

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           P+ +TY +L+ G  +   L+ A     KM+  G      +Y S+I+   + G ++    L
Sbjct: 398 PNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELL 457

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
           F  M+ KGL PT+ TYT LI  +   G +  AF  + EM  KGI PN +T+ ALI GLC+
Sbjct: 458 FKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQ 517

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
           + ++ +A  LF +M E  ILPN+ TY +LI  +C  GN   A  L  EM+ + + PD  T
Sbjct: 518 INKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYT 577

Query: 701 HSALLLKQLDKDYKVHAVEYLESL 724
           +  L+           A E++  L
Sbjct: 578 YRPLIAGLCSTGRVSEAKEFINDL 601



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/298 (27%), Positives = 134/298 (44%), Gaps = 43/298 (14%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR---EVYRMMG 235
           LL  + K+  +++ L+   +M+  GL  D+ +      VL     +   R   E+ R M 
Sbjct: 616 LLQGFCKEGRIKEALVARQEMVGRGLQMDLVS----YAVLISGALNQNDRILFELLREMH 671

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
             G++P  V Y  ++D F K G +++A E  + M G G  PN VTY  L+ G  + G + 
Sbjct: 672 GKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVN 731

Query: 296 QARGLIRDMLKLGLKVSAH-----------------------------------SYNPII 320
           +A+ L + ML +G  +  H                                   +YN +I
Sbjct: 732 EAKLLFKRML-VGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSFANTVTYNILI 790

Query: 321 CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
            GY + G   EA  L + M+  G+ P   TY+  IY  CK G V  A   +  ML++ + 
Sbjct: 791 RGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLK 850

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
           PD + +N L++  C +G +  A  L +++  R L PT  TY++L+  L +   L   Q
Sbjct: 851 PDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARLTQVQ 908



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 130/279 (46%), Gaps = 24/279 (8%)

Query: 94  VRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAY--WVVETVV 151
           V +   + +  RI     R +  + G++ D  ++  +++  I+SG L+ A+  W +    
Sbjct: 650 VLISGALNQNDRILFELLREMHGK-GMQPDNVIYTILIDGFIKSGNLKKAFEFWYI---- 704

Query: 152 CVNMHGILDVLIGGGL--SSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVK 209
                     +IG G   +S     +++ L     K   V +  L+F +ML    +P+  
Sbjct: 705 ----------MIGEGYVPNSVTYTALVNGLF----KAGYVNEAKLLFKRMLVGEAIPNHI 750

Query: 210 NCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM 269
                +  L   G    A +++  M + G   + VTYN ++  +C+ G+ QEA +LL  M
Sbjct: 751 TYGCFLDHLTKEGNMENALQLHNAMLQ-GSFANTVTYNILIRGYCQIGKFQEAAKLLDVM 809

Query: 270 QGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLL 329
            G G  P+ +TY+  I  + + G ++ A  +   ML+ GLK     +N +I      G L
Sbjct: 810 IGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGEL 869

Query: 330 VEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
             AL L  +M+ RG+ PT +TY+ L+  L +  R++  +
Sbjct: 870 DRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARLTQVQ 908


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 182/606 (30%), Positives = 297/606 (49%), Gaps = 31/606 (5%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVV-----------CVNM 155
           AL  F  V  +  + ++  ++  I+ +L  + L   A  ++  ++           C ++
Sbjct: 53  ALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQKSRRSRICCSV 112

Query: 156 HGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRII 215
             +L  L     SS  +  +  +L++ +++  +VE+ L V+ KM    +LP ++ CN ++
Sbjct: 113 FNVLSRL----ESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVL 165

Query: 216 KVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCS 275
             L   G      +VY  M   G  P++VTY T++D  C++G+  +A  L  EM  +   
Sbjct: 166 DGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIF 225

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           P  V Y +LI G      + +A  + R M   G+  + ++YN ++ GY +   + +AL L
Sbjct: 226 PTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALEL 285

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
             EM+  G+ P + T+ ILI GLCK   +  AR    +M    V+P+I  YN L+ GYC+
Sbjct: 286 YXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCK 345

Query: 396 SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
           +GN+ EA  L  E+    ++P V TY+ LI GLC    +E A  L + M  +G LP+ +T
Sbjct: 346 AGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVT 405

Query: 456 YTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML 515
           Y  +++G CK GN+  A E  ++M  KG++P+   ++T I G  K G    A  L  EM+
Sbjct: 406 YNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMV 465

Query: 516 AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLR 575
            KG  PD++ Y  L+ G  K G+ +EA  L ++M   G  P+  T + +I    + G + 
Sbjct: 466 IKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRIS 525

Query: 576 RGRDLF-------------NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
               LF             N + R   SP  V YT LI      GR+  A  +FS+M+  
Sbjct: 526 DAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCS 585

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
           G+RP+V T   +I G  R   +     L  D+ + GI+PN   Y +L      +G  + A
Sbjct: 586 GLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSA 645

Query: 683 LRLYKE 688
           L    E
Sbjct: 646 LSFCGE 651



 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 149/468 (31%), Positives = 247/468 (52%), Gaps = 16/468 (3%)

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           +  ++ +F + G ++EAL + ++M      P     N+++ G  + G  +    +  DM+
Sbjct: 129 FGVLIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGLVKKGRFDTMWKVYGDMV 185

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
             G   +  +Y  +I G   +G  ++A  L +EM+ + + PT+  Y ILI GLC   R+S
Sbjct: 186 ARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRIS 245

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
           +A   F  M    ++P++ +YNT++ GYC+  ++ +A  L+ E+    L+P VVT+  LI
Sbjct: 246 EAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILI 305

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           DGLC+  ++  A++   +M + G++P++  Y  +++G CK GNLS A    +E+ +  + 
Sbjct: 306 DGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEIL 365

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           PD F Y+  I G   +    EA  L +EM  KGF P+ +TYN L+ G CK G++E+A E+
Sbjct: 366 PDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEV 425

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
             +M   G  P+ IT++++I    + G +     L+  M+ KGL P +V YT LI  H  
Sbjct: 426 CSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFK 485

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI------------- 652
            G  + AF    EMQ  G+ PNV T + LI+GLC+  RI  A  LF+             
Sbjct: 486 DGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTN 545

Query: 653 DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
           +++     PN   YT LI   C  G   +A + + +M    + PD  T
Sbjct: 546 ELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFT 593



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 149/467 (31%), Positives = 240/467 (51%), Gaps = 25/467 (5%)

Query: 261 EALELLWEMQGRG-CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL------------ 307
           +ALEL   +  R   + N   Y+ +I   +      +AR L+RD+++             
Sbjct: 52  QALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQKSRRSRICCS 111

Query: 308 ---------GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
                      K + + +  +I  +SE GL+ EAL +  +M    V P +   N+++ GL
Sbjct: 112 VFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGL 168

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
            K GR       + +M+ +   P++++Y TL+ G CR G+  +AF LFDE+  + + PTV
Sbjct: 169 VKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTV 228

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           V Y  LI GLC    +  A+ +   M N G+LP++ TY  M++G CK+ ++  A E + E
Sbjct: 229 VIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXE 288

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           ML  GL P+   +   I G  K  +   A +   +M + G  P++  YN L+ G CK G+
Sbjct: 289 MLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGN 348

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           L EA  L  ++     +PD  TY+ +I     +  +     L   M +KG  P  VTY  
Sbjct: 349 LSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT 408

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           LI  +   G +E A    S+M  KGI PN+IT++ LI+G C+  +++ A GL+ +M  +G
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG 468

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +LP+   YT LI+ +   GN +EA RL+KEM +  + P+  T S L+
Sbjct: 469 LLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLI 515



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 143/621 (23%), Positives = 260/621 (41%), Gaps = 98/621 (15%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           +I + + L+  Y K   + + L + +++ ++ +LPDV   + +IK L       +A  + 
Sbjct: 332 NIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLL 391

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
           + M + G  P+ VTYNT++D +CKEG M++A+E+  +M  +G  PN +T++ LI G+ + 
Sbjct: 392 QEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKA 451

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G++E A GL  +M+  GL     +Y  +I G+ + G   EA  L +EM   G+ P + T 
Sbjct: 452 GKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTL 511

Query: 352 NILIYGLCKWGRVSDA-------------------------------------------- 367
           + LI GLCK GR+SDA                                            
Sbjct: 512 SCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGR 571

Query: 368 ---RHRFFEMLR-KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
                +FF  +R   + PD+ +   ++ G+ R+ ++ +  +L  ++    ++P    Y  
Sbjct: 572 IFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRV 631

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILP-DVI------TYTIMV---------NGSC--- 464
           L  G    G L+ A     +   +G+ P D +      +YTI              C   
Sbjct: 632 LAKGYEESGYLKSAL----SFCGEGVQPLDRVNSEPWGSYTIRSRFQLCVVTEKKECHSS 687

Query: 465 ---KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
                G  S    ++   + K   P          G+      ++A +L  +M      P
Sbjct: 688 YLTAFGIHSFVLLWYFHTILKPPSPHEILKKVPFIGQKGDQRPNKALQLFRQMQMDDXQP 747

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           D++T  V +     LG+L+    +   +   G   D     S+I+   + G++   R LF
Sbjct: 748 DIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRLF 807

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR---------------- 625
           +   +K ++    T+T +I  HA  G+ E A   F+EM+    R                
Sbjct: 808 DGTQKKDVT----TWTSMIVGHALHGQAEEALQLFTEMKETNKRARKNKRNGEXESSLVL 863

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEE-GILPNKYTYTILINENCNAGNWQEALR 684
           PN +T+  ++        +++    F  M+E+  + P    +  +++  C AG   EA  
Sbjct: 864 PNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEA-- 921

Query: 685 LYKEMLDREIEPDYCTHSALL 705
            Y+ +L   + P+      LL
Sbjct: 922 -YEFILKMPVRPNAVVWRTLL 941



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 116/513 (22%), Positives = 206/513 (40%), Gaps = 66/513 (12%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K   +E  + ++ +M+  GLLPDV     +I     +G + +A  +++ M E G+ P+
Sbjct: 448 YCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPN 507

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRG-------------CSPNGVTYNVLITGFS 289
           + T + ++D  CK+G + +A++L     G               CSPN V Y  LI G  
Sbjct: 508 VFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLC 567

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
            +G + +A     DM   GL+    +   II G+     L + + L+ +++  G+ P  +
Sbjct: 568 TDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSS 627

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY---------------- 393
            Y +L  G  + G +  A         + V P +   N+  +G                 
Sbjct: 628 VYRVLAKGYEESGYLKSA----LSFCGEGVQP-LDRVNSEPWGSYTIRSRFQLCVVTEKK 682

Query: 394 -CRSGNIG----EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV--AQQLKENMIN 446
            C S  +      +F+L     +    P+       +  + + GD     A QL   M  
Sbjct: 683 ECHSSYLTAFGIHSFVLLWYFHTILKPPSPHEILKKVPFIGQKGDQRPNKALQLFRQMQM 742

Query: 447 QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSE 506
               PD++T T+ ++    +G L M       +  +GL  D     + I    K G+   
Sbjct: 743 DDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGT 802

Query: 507 AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA----------NELLRKMVGDG--- 553
           A RL +    K    D+ T+  ++ G    G  EEA          N+  RK   +G   
Sbjct: 803 ARRLFDGTQKK----DVTTWTSMIVGHALHGQAEEALQLFTEMKETNKRARKNKRNGEXE 858

Query: 554 ---FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK-GLSPTLVTYTVLIHAHAARGRL 609
               +P+ +T+  ++ A    G +  G+  F +M     L P +  +  ++      G L
Sbjct: 859 SSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLL 918

Query: 610 ELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
             A+ +  +M V   RPN + +  L+ G C L+
Sbjct: 919 TEAYEFILKMPV---RPNAVVWRTLL-GACSLQ 947



 Score = 38.9 bits (89), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 46/238 (19%)

Query: 230  VYRMMGEFGI---------KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVT 280
            +Y   GE G          K  + T+ +M+      G+ +EAL+L  EM+          
Sbjct: 793  MYSKCGEIGTARRLFDGTQKKDVTTWTSMIVGHALHGQAEEALQLFTEMK---------E 843

Query: 281  YNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA----LNLE 336
             N       RNGE E +  L  D+  +G          ++   S  GL+ E      +++
Sbjct: 844  TNKRARKNKRNGEXESSLVLPNDVTFMG----------VLMACSHAGLVEEGKQHFRSMK 893

Query: 337  EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC-- 394
            E+   R   P ++ +  ++  LC+ G +++A + F  +L+  V P+ + + TLL G C  
Sbjct: 894  EDYSLR---PRISHFGCMVDLLCRAGLLTEA-YEF--ILKMPVRPNAVVWRTLL-GACSL 946

Query: 395  ---RSGNIGEAFLLFDELRSR--NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
                +GN      +  E R +   L P+ V  N ++  L     +   + L  N I Q
Sbjct: 947  QGDSNGNGNSNIKIXSEARRQLLELEPSHVGDNVIMSNLYAAKGMWDKKMLVRNQIKQ 1004


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 173/621 (27%), Positives = 304/621 (48%), Gaps = 7/621 (1%)

Query: 90  PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVET 149
           P  L  + N     P  AL FF+W+  Q G       +  +L IL+ +G LR+A  V  +
Sbjct: 69  PTHLSSLFNNPNLHPLTALNFFKWIHYQHGFIHTVHSYQPLLFILVRNGFLRAAENVRNS 128

Query: 150 VV--CVNMHG---ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGL 204
           ++  CV+ H    +L++L     S  +S+   + L ++ ++  ++++   +F  ML +G+
Sbjct: 129 MIKSCVSSHEARFVLNLLTHHEFS--LSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGV 186

Query: 205 LPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALE 264
            P++ + N ++      G  V A+  +  + +FG      TY +++  +CK  E+ +A +
Sbjct: 187 EPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYK 246

Query: 265 LLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYS 324
           +   M   GC  N V+Y  LI GF   G++++A  L   M + G      +Y  ++  + 
Sbjct: 247 VFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFC 306

Query: 325 EKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDII 384
           E G   EAL   EEMV  G+ P + TY +LI   CK G++ +       ML K ++  ++
Sbjct: 307 EVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVV 366

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
            +N L+ GYC+ G + +A  + D ++   + P   TYN LI G CR   ++ A  L   M
Sbjct: 367 PFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKM 426

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
               + P+++TY  +++G CK   +  A    + M++ G  PD+  +   I    K+G  
Sbjct: 427 YENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKV 486

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
            +A+++ E +  K    +   Y  L+ G CK     +A+ L ++M+ +G  P+ IT+  +
Sbjct: 487 EQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVL 546

Query: 565 IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
           +    + G +     L + M +    PT+ TYT+LI         + A M+  +M   G 
Sbjct: 547 LDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGC 606

Query: 625 RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
           +PNV+TY A I   CR  R+ +A  + + ++EEGIL + + Y +L+N     G    A  
Sbjct: 607 QPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFG 666

Query: 685 LYKEMLDREIEPDYCTHSALL 705
           +   M D   EP   T+S LL
Sbjct: 667 VLIRMFDTGCEPSRQTYSILL 687



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 150/530 (28%), Positives = 263/530 (49%), Gaps = 28/530 (5%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +++ L +F +M  +G  PDV     ++    + G   +A + +  M E GI+P++ TY  
Sbjct: 276 IDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTV 335

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++D FCK G+M E +E+L  M  +G   + V +N LI G+ + G +E A  ++  M    
Sbjct: 336 LIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNK 395

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           +  ++ +YN +ICG+  K  +  A+ L  +M    ++P L TYN LI+GLCK  RV D+ 
Sbjct: 396 VCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCK-ARVVDSA 454

Query: 369 HRFFE-MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
            R    M++   +PD  ++   +   C+ G + +A  +F+ L+ ++       Y  LIDG
Sbjct: 455 WRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDG 514

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
            C+      A  L + M+ +G  P+ IT+ ++++G  K G +  A    + M +   +P 
Sbjct: 515 YCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPT 574

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              YT  I   L+  D   A    ++M++ G  P+++TY   +   C+ G L EA E++ 
Sbjct: 575 VHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVV 634

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI------- 600
           K+  +G + D   Y  +++A   +G L     +   M   G  P+  TY++L+       
Sbjct: 635 KIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEK 694

Query: 601 ------------------HAHAAR-GRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
                             +A+  +    E+  M F +M  +G  PNV TY+ LI GLC++
Sbjct: 695 YNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKV 754

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
             +  A+ LF  M+E GI P++  +  L++  C  G  +EALRL   M++
Sbjct: 755 EHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMME 804



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 146/578 (25%), Positives = 234/578 (40%), Gaps = 96/578 (16%)

Query: 191 QCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTML 250
           + L  F +M+ NG+ P+V     +I      G   +  E+   M E G+  S+V +N ++
Sbjct: 313 EALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALI 372

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
           D +CK G M++A+ +L  M+     PN  TYN LI GF R   +++A  L+  M +  L 
Sbjct: 373 DGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLS 432

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV------ 364
            +  +YN +I G  +  ++  A  L   M+  G  P   T+   I  LCK G+V      
Sbjct: 433 PNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQV 492

Query: 365 -----------------------------SDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
                                        SDA   F  ML +   P+ I++N LL G  +
Sbjct: 493 FESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRK 552

Query: 396 SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
            G + +A  L D +   +  PTV TY  LI+ + R  D + A    + MI+ G  P+V+T
Sbjct: 553 EGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVT 612

Query: 456 YTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML 515
           YT  +   C+ G L  A E   ++  +G+  D F Y   +     +G    A+ +   M 
Sbjct: 613 YTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMF 672

Query: 516 AKGFPPDLITYNVLVHGLC--------------------------KLGSLEEANELLRKM 549
             G  P   TY++L+  L                           K+   E    L  KM
Sbjct: 673 DTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKM 732

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT----------------- 592
           V  G +P+  TY+ +I    ++  L     LFN+M   G+SP+                 
Sbjct: 733 VEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMH 792

Query: 593 ------------------LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
                             L +Y +L+     +G  E A   F  +   G   + + +  L
Sbjct: 793 EEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVL 852

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
           ++GL R   +D+   L   ME+ G   +  T+T+L  E
Sbjct: 853 LDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHTMLSQE 890



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/441 (25%), Positives = 200/441 (45%), Gaps = 26/441 (5%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K  +V+    + + M+++G +PD +     I  L   G   +A +V+  + E   + +  
Sbjct: 447 KARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEF 506

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
            Y  ++D +CK  +  +A  L   M   GC PN +T+NVL+ G  + G++E A  L+  M
Sbjct: 507 LYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVM 566

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
            K   K + H+Y  +I     +     A    ++M++ G  P + TY   I   C+ GR+
Sbjct: 567 GKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRL 626

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            +A     ++  + ++ D   Y+ L+  Y   G +  AF +   +      P+  TY+ L
Sbjct: 627 LEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSIL 686

Query: 425 IDGLC--------------------------RYGDLEVAQQLKENMINQGILPDVITYTI 458
           +  L                           +  D E+   L E M+ QG +P+V TY+ 
Sbjct: 687 LKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSK 746

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           ++ G CK+ +LS+A   FN M   G+ P    + + ++   KLG   EA RL + M+   
Sbjct: 747 LIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYN 806

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
               L +Y +LV GL + G+ E+A E+ R ++  G+  D + +  ++   +  G +    
Sbjct: 807 HLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECS 866

Query: 579 DLFNNMLRKGLSPTLVTYTVL 599
            L + M + G      T+T+L
Sbjct: 867 QLRDIMEKTGCRLHSDTHTML 887



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 141/313 (45%), Gaps = 18/313 (5%)

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
            + TV +Y  L+  L R G L  A+ ++ +MI                 SC   +   AR
Sbjct: 99  FIHTVHSYQPLLFILVRNGFLRAAENVRNSMIK----------------SCVSSH--EAR 140

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
              N +          +Y        + G   E   L ++ML  G  P+LI++N +V+  
Sbjct: 141 FVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAH 200

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
           CK+G++  A      ++  GF  D  TYTS+I    ++ +L     +F  M ++G     
Sbjct: 201 CKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNE 260

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
           V+YT LIH     G+++ A   F +M+  G  P+V TY  L+   C + +  +A   F +
Sbjct: 261 VSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEE 320

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDY 713
           M E GI PN YTYT+LI+  C  G   E + +   ML++ +       +AL+     +  
Sbjct: 321 MVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGM 380

Query: 714 KVHAVEYLESLTL 726
              A+  L+S+ L
Sbjct: 381 MEDAICVLDSMKL 393


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 161/497 (32%), Positives = 264/497 (53%), Gaps = 36/497 (7%)

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M +  I  ++ TY++++ S  KE + +E+ ++L EM   GC+P+   +N ++ GF+R+  
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           +E+AR + + M++ G K    SY+ +I G ++ G L E+L +  EMV RG  P++  Y+ 
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 354 L-----------------------------------IYGLCKWGRVSDARHRFFEMLRKN 378
           L                                   I GLC+ G+V DA  RF +M +  
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
             P++  YN LL+G C SG + +A  LF E++S +  P VVTYNTL+D +C+   +E   
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
           +L E M   G +P+VIT++ +++G C+ G L  A E F  ML  G +P+++ YTT I+G 
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD-GFIPD 557
            +     +A  L E+M     PPD + YN L+ G CK GS++EA +L R+M G  G  P 
Sbjct: 301 CRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPT 360

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
            +T+ ++I    ++G L R  +L   M  KGL+    TY +LI   +   +L+ A   + 
Sbjct: 361 IVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYK 420

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
           +M+ K    + ++  + + GLC+   IDQAY +F    + G +PN  T+ IL       G
Sbjct: 421 QMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLG 480

Query: 678 NWQEALRLYKEMLDREI 694
             ++A +L +    R+I
Sbjct: 481 RVEDAQKLMEPAKARDI 497



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 135/464 (29%), Positives = 221/464 (47%), Gaps = 36/464 (7%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K++  E+   V  +M+  G  PDV   N +++    +    KAREVY+ M E G KP  V
Sbjct: 22  KEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNV 81

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           +Y+ ++    K G++ E+L++L EM  RG +P+   Y+ L+   ++   ++ A  L  +M
Sbjct: 82  SYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEM 141

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           ++ G       +  +I G  + G + +A    ++M   G  P +  YN+L++GLC  G++
Sbjct: 142 IRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQL 201

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT---- 420
             A   F EM   +  PD+++YNTLL   C++  + E   LF+ +R+   VP V+T    
Sbjct: 202 EQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTL 261

Query: 421 -------------------------------YNTLIDGLCRYGDLEVAQQLKENMINQGI 449
                                          Y TLI GLCR   +  A++L E M    I
Sbjct: 262 IHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACI 321

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEML-RKGLQPDRFAYTTQIAGELKLGDTSEAY 508
            PD + Y  ++ G CK G++  A + + EM    GLQP    + T I G  KLG    A 
Sbjct: 322 PPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRAN 381

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
            L  EM  KG   D  TY +L+ GL +   L+EA E+ ++M    F+ D ++  S +   
Sbjct: 382 ELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGL 441

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
            + G++ +   +F    + G  P   T+ +L  +    GR+E A
Sbjct: 442 CKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDA 485



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 165/317 (52%)

Query: 409 LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
           +R +N+   V TY+++I  L +    E + ++ E M+  G  PDV  +  ++ G  +  N
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
           +  ARE +  M+  G +PD  +Y   I G  K+G   E+ ++  EM+ +G  P +  Y+ 
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           LV  L K   ++ A+ L  +M+  G  PD + +  +I    + G ++   + F  M + G
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
             P +  Y VL+H   + G+LE A   F+EM+     P+V+TYN L++ +C+ RR+++  
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQ 708
            LF  M   G +PN  T++ LI+  C  G  ++AL ++  ML+   +P+  T++ L+   
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300

Query: 709 LDKDYKVHAVEYLESLT 725
              +  + A E  E +T
Sbjct: 301 CRAEKVIQARELFEKMT 317



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 81/216 (37%), Gaps = 71/216 (32%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR-MMGEFGIKPSIVTYN 247
           V Q   +F KM +  + PD    N +I      G   +A ++YR M G  G++P+IVT+N
Sbjct: 306 VIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFN 365

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR----------------- 290
           T++D FCK G++  A EL+ EM  +G + +  TY +LI G SR                 
Sbjct: 366 TLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREK 425

Query: 291 ------------------NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA 332
                              G ++QA  +                                
Sbjct: 426 KFLLDPVSCVSFVGGLCKTGNIDQAYAVF------------------------------- 454

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
               E     G  P   T+ IL   L K GRV DA+
Sbjct: 455 ----EATRKSGAVPNPETFRILSESLIKLGRVEDAQ 486


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 148/483 (30%), Positives = 266/483 (55%), Gaps = 1/483 (0%)

Query: 240 KPSIVTYNTMLDSFCKEGEMQEA-LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           +P I+ +N +L +  K     +A + L  +M+  G SP+  T ++LI  F +   ++   
Sbjct: 118 RPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGF 177

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            ++  ++KLGL+++  ++N +I G  + G   +A+ L ++MV RG  P + TY  +I GL
Sbjct: 178 SVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGL 237

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           CK G    A   F +M      PD+++Y+T++   C+   + EA  +F  ++++ + P +
Sbjct: 238 CKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNI 297

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
            TYN+LI GLC +     A  +   M++  I+P+++T+++++N  CK GN+  AR     
Sbjct: 298 FTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKT 357

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M   G++P+   Y++ + G     +  EA +L + M+ KG  PD+ +YN+L++G CK   
Sbjct: 358 MTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKR 417

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           + EA +L  +M+  G  PD ++Y ++I    ++G LR   DLF NML  G  P L TY++
Sbjct: 418 IGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSI 477

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           L+     +G L  AF  F  MQ   ++PN++ YN LI+ +C+ R + +A  LF ++  +G
Sbjct: 478 LLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQG 537

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAV 718
           + PN   YT +IN  C  G   EAL  ++ M +    P+  +++ ++   L    +  AV
Sbjct: 538 LQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAV 597

Query: 719 EYL 721
           + +
Sbjct: 598 QLI 600



 Score =  282 bits (721), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 163/513 (31%), Positives = 272/513 (53%), Gaps = 1/513 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIK-VLRDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
           ++  L  FN ML     P +   N+++  +++   +      + + M   G+ P   T +
Sbjct: 102 IDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLH 161

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
            +++ F +   +     +L ++   G     VT+N LI G  + G+  QA  L  DM+  
Sbjct: 162 MLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVAR 221

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           G +   H+Y  II G  + G  V A  L  +M   G  P + TY+ +I  LCK  RV++A
Sbjct: 222 GYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 281

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
              F  M  K + P+I +YN+L+ G C      EA  + +E+ S N++P +VT++ LI+ 
Sbjct: 282 LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINI 341

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
            C+ G++  A+ + + M   G+ P+V+TY+ ++NG      +  AR+ F+ M+ KG +PD
Sbjct: 342 FCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPD 401

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
            F+Y   I G  K     EA +L  EM+ +G  PD+++YN L+ GLC+LG L EA++L +
Sbjct: 402 VFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFK 461

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
            M+ +G +PD  TY+ ++    + G L +   LF  M    L P +V Y +LI A     
Sbjct: 462 NMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSR 521

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
            L+ A   FSE+ V+G++PNV  Y  +INGLC+   +D+A   F +MEE+G  PN+++Y 
Sbjct: 522 NLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYN 581

Query: 668 ILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
           ++I       +   A++L  EM ++    D  T
Sbjct: 582 VIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 96/354 (27%), Positives = 175/354 (49%), Gaps = 25/354 (7%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           AL  F +++ + G+  + F + ++++ L      R A  ++  ++ +N+           
Sbjct: 281 ALDIFSYMKAK-GISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMP--------- 330

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS-- 224
                +I    LL+ I+ K+  V +   V   M   G+ P+V   + ++     NG+S  
Sbjct: 331 -----NIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLM-----NGYSLQ 380

Query: 225 ---VKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY 281
              V+AR+++ +M   G KP + +YN +++ +CK   + EA +L  EM  +G +P+ V+Y
Sbjct: 381 AEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSY 440

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
           N LI G  + G L +A  L ++ML  G      +Y+ ++ G+ ++G L +A  L   M +
Sbjct: 441 NTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQS 500

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
             + P +  YNILI  +CK   + +AR  F E+  + + P++  Y T++ G C+ G + E
Sbjct: 501 TYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDE 560

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
           A   F  +      P   +YN +I G  ++ D   A QL   M  +G + DV T
Sbjct: 561 ALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 195/664 (29%), Positives = 325/664 (48%), Gaps = 54/664 (8%)

Query: 97  LNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMH 156
           L RIR+  R+AL  F  +    G++ D +V+  ++  L E      A  V+         
Sbjct: 190 LIRIRQF-RMALHLFDEI-VSSGLRPDVYVYTAVVRSLCELKDFIRAREVI--------- 238

Query: 157 GILDVLIGGGLSSC-VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKN-CNRI 214
           G ++       S C +S+   ++ +    K   V + + + N +   GL  DV   C  +
Sbjct: 239 GRMES------SGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLV 292

Query: 215 IKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGC 274
           + + +   F     E+   M EFG  PS    + ++D   K+G +  A +L+ +++  G 
Sbjct: 293 LGLCKVEEFEA-GEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGV 351

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
           +P+   YN LI    ++G+L++A  L  +M   GL  +  +Y+ +I  + ++G L  AL+
Sbjct: 352 APSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALH 411

Query: 335 LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
              +M   G+  T+  Y+ LI G CK G++  A+  F EM+   + P+++ Y +L+ GYC
Sbjct: 412 FLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYC 471

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
           + G +  AF L+ E+  + + P   T+  LI GLC    +  A +L   M+   ++P+ +
Sbjct: 472 KEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEV 531

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
           TY +++ G CK GN   A E  +EM+ KGL PD + Y   I+G    G  SEA     ++
Sbjct: 532 TYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDL 591

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
             +    + + ++ L+HG CK G L++A +  R+M+G G   D + Y+ +I+  L   D 
Sbjct: 592 QGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDR 651

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
           R   DL   M  +GL P  V YT +I A+A  G L++AF  +  M  +G  PNV+TY AL
Sbjct: 652 RSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTAL 711

Query: 635 INGLCRLRRIDQA------------------YGLFID-------MEE---------EGIL 660
           INGLC++  +D+A                  Y  F+D       +E+         EG L
Sbjct: 712 INGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFL 771

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
            N  TY ILI   C  G  QEA  +   M+D  I PD  ++S ++ +   +     A++ 
Sbjct: 772 ANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKL 831

Query: 721 LESL 724
            ES+
Sbjct: 832 WESM 835



 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 167/559 (29%), Positives = 278/559 (49%), Gaps = 69/559 (12%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           KK  +     + NK+ + G+ P +   N +I  +  +G   +A  ++  MG  G+ P+ V
Sbjct: 332 KKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDV 391

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY+ ++DSFCK G++  AL  L +M   G       Y+ LI+G  + G+L  A+ L  +M
Sbjct: 392 TYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEM 451

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           +  GLK +   Y  +I GY ++G L  A  L  EM  +G++P   T+  LI GLC   R+
Sbjct: 452 IANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRM 511

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
           ++A   F EM+  NVIP+ ++YN L+ G+C+ GN   AF L DE+  + LVP   TY  L
Sbjct: 512 AEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPL 571

Query: 425 IDGLCRYG----------DLEVAQQ--------------LKEN-----------MINQGI 449
           I GLC  G          DL+  QQ               KE            M+ +G+
Sbjct: 572 ISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGV 631

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
             D++ Y++++ G  +  +     +   +M  +GL+PD   YTT I    K G+   A+ 
Sbjct: 632 AMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFG 691

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG------------------ 551
           L + M+++G  P+++TY  L++GLCK+G +++A  L R+M+                   
Sbjct: 692 LWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLT 751

Query: 552 ----------------DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
                           +GF+ + +TY  +I    ++G ++   ++  NM+  G+SP  ++
Sbjct: 752 SEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCIS 811

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           Y+ +I+ +  RG L+ A   +  M  +G+ P+ + YN LI G C    + +A+ L  DM 
Sbjct: 812 YSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMM 871

Query: 656 EEGILPNKYTYTILINENC 674
             G+ PN+ TY  LI+  C
Sbjct: 872 RRGVKPNRATYNSLIHGTC 890



 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 181/676 (26%), Positives = 320/676 (47%), Gaps = 49/676 (7%)

Query: 75  NNRW---VSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTIL 131
           N  W   +++ F +    P  + +VL +  +  R+ALRFF ++            FC ++
Sbjct: 41  NQSWRVALNNSFISQTLKPHHVEKVLIQTLDDSRLALRFFNFLGLHKNFDHSTTSFCILI 100

Query: 132 EILIESGLLRSAYWVVET------VVCVNMHGILDVLIGGGLSSCVSIKI-LDLLLLIYT 184
             L++S L    YW   +      +  +N  G+ +  +        S  +  DLL+  Y 
Sbjct: 101 HALVQSNL----YWPASSLLQTLLLRGLNPEGLFESFLDSYRKCNFSTTLGFDLLIQTYV 156

Query: 185 KK----------SMVEQC-------------------------LLVFNKMLRNGLLPDVK 209
           +            ++  C                         L +F++++ +GL PDV 
Sbjct: 157 QNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVY 216

Query: 210 NCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM 269
               +++ L +    ++AREV   M   G   S+ TYN  +   CK   + EA+E+   +
Sbjct: 217 VYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLL 276

Query: 270 QGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLL 329
             +G   +  TY  L+ G  +  E E    ++ +M++ G   S  + + ++ G  +KG +
Sbjct: 277 SYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNI 336

Query: 330 VEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTL 389
             A +L  ++   GVAP+L  YN LI  +CK G++ +A   F  M  K + P+ ++Y+ L
Sbjct: 337 GSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSIL 396

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
           +  +C+ G +  A     ++    +  TV  Y++LI G C+ G L  A+ L + MI  G+
Sbjct: 397 IDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGL 456

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
            P+V+ YT +++G CK G L  A   ++EM  KG+ P+ + +T  I+G       +EA +
Sbjct: 457 KPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANK 516

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           L  EM+     P+ +TYNVL+ G CK G+   A ELL +MV  G +PD  TY  +I    
Sbjct: 517 LFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLC 576

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
             G +   R+  N++  +      + ++ L+H +   GRL+ A     EM  +G+  +++
Sbjct: 577 STGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLV 636

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
            Y+ LI G+ R +       L   M ++G+ P+   YT +I+ N  AGN + A  L+  M
Sbjct: 637 CYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIM 696

Query: 690 LDREIEPDYCTHSALL 705
           +     P+  T++AL+
Sbjct: 697 VSEGCLPNVVTYTALI 712



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 159/504 (31%), Positives = 256/504 (50%), Gaps = 34/504 (6%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +L+  + K+  ++  L    KM   G+   V   + +I      G    A+ ++  M   
Sbjct: 395 ILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIAN 454

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G+KP++V Y +++  +CKEGE+  A  L  EM G+G SPN  T+  LI+G      + +A
Sbjct: 455 GLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEA 514

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L  +M++  +  +  +YN +I G+ ++G  V A  L +EMV +G+ P   TY  LI G
Sbjct: 515 NKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISG 574

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           LC  GRVS+AR    ++  +    + + ++ LL+GYC+ G + +A     E+  R +   
Sbjct: 575 LCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMD 634

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           +V Y+ LI G+ R  D      L + M +QG+ PD + YT M++ + K GNL MA   ++
Sbjct: 635 LVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWD 694

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA--------------------- 516
            M+ +G  P+   YT  I G  K+G   +A  L  EMLA                     
Sbjct: 695 IMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEG 754

Query: 517 -------------KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
                        +GF  + +TYN+L+ G CKLG ++EA E+L  M+  G  PD I+Y++
Sbjct: 755 NIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYST 814

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           II+     GDL+    L+ +ML +G++P  V Y  LI+     G L  AF    +M  +G
Sbjct: 815 IIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRG 874

Query: 624 IRPNVITYNALINGLCRLRRIDQA 647
           ++PN  TYN+LI+G C +  +   
Sbjct: 875 VKPNRATYNSLIHGTCLMSSVSST 898



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 153/534 (28%), Positives = 265/534 (49%), Gaps = 1/534 (0%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           S+ + + L+    K   +++   +FN M   GL P+    + +I      G    A    
Sbjct: 354 SLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFL 413

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M E GIK ++  Y++++   CK G+++ A  L  EM   G  PN V Y  LI+G+ + 
Sbjct: 414 GKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKE 473

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           GEL  A  L  +M   G+  + +++  +I G      + EA  L  EMV   V P   TY
Sbjct: 474 GELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTY 533

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           N+LI G CK G    A     EM+ K ++PD  +Y  L+ G C +G + EA    ++L+ 
Sbjct: 534 NVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQG 593

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
                  + ++ L+ G C+ G L+ A      M+ +G+  D++ Y++++ G  +  +   
Sbjct: 594 EQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRS 653

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
             +   +M  +GL+PD   YTT I    K G+   A+ L + M+++G  P+++TY  L++
Sbjct: 654 IIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALIN 713

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           GLCK+G +++A  L R+M+    +P+  TY   +      G++ +   L +++L +G   
Sbjct: 714 GLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQL-HDVLLEGFLA 772

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
             VTY +LI      GR++ A      M   GI P+ I+Y+ +I   CR   + +A  L+
Sbjct: 773 NTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLW 832

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             M   G+ P+   Y  LI   C  G   +A  L  +M+ R ++P+  T+++L+
Sbjct: 833 ESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLI 886



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 150/513 (29%), Positives = 247/513 (48%), Gaps = 49/513 (9%)

Query: 101 REKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILD 160
           R K  +AL F   + T+ G+K   + + +++    + G LR+A              + D
Sbjct: 403 RGKLDVALHFLGKM-TEVGIKATVYPYSSLISGHCKLGKLRAA------------KSLFD 449

Query: 161 VLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRD 220
            +I  GL    ++ I   L+  Y K+  +     ++++M   G+ P+      +I  L  
Sbjct: 450 EMIANGLKP--NVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCH 507

Query: 221 NGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVT 280
                +A +++  M E+ + P+ VTYN +++  CKEG    A ELL EM  +G  P+  T
Sbjct: 508 ANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYT 567

Query: 281 YNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV 340
           Y  LI+G    G + +AR  + D+     K++   ++ ++ GY ++G L +AL+   EM+
Sbjct: 568 YRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREML 627

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
            RGVA  L  Y++LIYG+ +            +M  + + PD + Y T++    ++GN+ 
Sbjct: 628 GRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLK 687

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI------NQ------- 447
            AF L+D + S   +P VVTY  LI+GLC+ G ++ A+ L   M+      NQ       
Sbjct: 688 MAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFL 747

Query: 448 ---------------------GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
                                G L + +TY I++ G CK+G +  A E    M+  G+ P
Sbjct: 748 DYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISP 807

Query: 487 DRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
           D  +Y+T I    + GD  EA +L E ML +G  PD + YN L++G C  G L +A EL 
Sbjct: 808 DCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELR 867

Query: 547 RKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
             M+  G  P+  TY S+IH +  M  +    D
Sbjct: 868 DDMMRRGVKPNRATYNSLIHGTCLMSSVSSTAD 900



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 125/421 (29%), Positives = 193/421 (45%), Gaps = 35/421 (8%)

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
           M+  G+ P + T + ++ GL +  +   A H F E++   + PD+  Y  ++   C   +
Sbjct: 171 MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKD 230

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
              A  +   + S     +V TYN  I GLC+   +  A ++K  +  +G+  DV TY  
Sbjct: 231 FIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCT 290

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           +V G CK+       E  NEM+  G  P   A +  + G  K G+   A+ L  ++   G
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT------------------ 560
             P L  YN L++ +CK G L+EA  L   M   G  P+ +T                  
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVAL 410

Query: 561 -----------------YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
                            Y+S+I    ++G LR  + LF+ M+  GL P +V YT LI  +
Sbjct: 411 HFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGY 470

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
              G L  AF  + EM  KGI PN  T+ ALI+GLC   R+ +A  LF +M E  ++PN+
Sbjct: 471 CKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNE 530

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLES 723
            TY +LI  +C  GN   A  L  EM+++ + PD  T+  L+           A E++  
Sbjct: 531 VTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMND 590

Query: 724 L 724
           L
Sbjct: 591 L 591


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 179/611 (29%), Positives = 298/611 (48%), Gaps = 25/611 (4%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHG---ILDVLI 163
           A+ FFRW   Q G + D F +  ++ +L+        Y + E ++   +       ++LI
Sbjct: 102 AISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILI 161

Query: 164 --------GGGLSSCVSI--------KILDLLLLI--YTKKSMVEQCLLVFNKMLRNGLL 205
                        +C  I         +   L+L+    K  M E+   VF++M+  G +
Sbjct: 162 RSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFV 221

Query: 206 P-DVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALE 264
           P D      +++ L       +AREV+  M + G  P  + YNTM+D   K G  QEAL+
Sbjct: 222 PPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALK 281

Query: 265 LLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYS 324
           +L  M  + C P  VTY +L+    + G LE+A  L R M   G + ++  Y  +I G++
Sbjct: 282 VLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFA 341

Query: 325 EKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDII 384
           + G + EA +L +EMV  G  P + T+ ++I GLCK G    A   F EM+R    P+++
Sbjct: 342 KSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVV 401

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
           +Y T++ G  + G +  AF +   + +    P  VTY  L+DG C+ G L+ A QL + +
Sbjct: 402 TYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDEL 461

Query: 445 INQGILPDVITYTIMVNGSCKMGNL-SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
                 P++  Y+ +V G C  G++ +   + F +        D     + I G  K G 
Sbjct: 462 DKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGR 521

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL--GSLEEANELLRKMVGDGFIPDHITY 561
             EA R+ + M+++G  PD  TYN+L++GLC+     +E A  LL  +   G++PD +TY
Sbjct: 522 LDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTY 581

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
           T +     ++G++ R   +      +G +  +V YT L      +G+++ A   F EM  
Sbjct: 582 TPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVR 641

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
           +G  P+   Y  +INGL + ++++ A   F +M  +G  P   TYT L+   C+AGN  E
Sbjct: 642 QGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDE 701

Query: 682 ALRLYKEMLDR 692
           A   ++ ML R
Sbjct: 702 AFHRFEGMLAR 712



 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 167/535 (31%), Positives = 261/535 (48%), Gaps = 44/535 (8%)

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGE-FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQ 270
           + +  VLR    +  A   +R  GE  G +  + TYN +++    E    +   +  EM 
Sbjct: 87  SHVAAVLRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEML 146

Query: 271 GRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLV 330
             G +PN  ++N+LI  F+R    + A      M +   K   H++  ++    + G+  
Sbjct: 147 KAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDE 206

Query: 331 EALNLEEEMVTRG-VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTL 389
           +A  +  EM+  G V P  A +  ++  L K  RV +AR  F +M +    PD I+YNT+
Sbjct: 207 KAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTM 266

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL--------- 440
           + G  ++G+  EA  + D + ++  VPT VTY  L++ LC+ G LE A++L         
Sbjct: 267 IDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGF 326

Query: 441 --------------------KE------NMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
                               KE       M+  G  PDVIT+T+M++G CK GN   A +
Sbjct: 327 RPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAK 386

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
            F EM+R G +P+   YTT I G  K+G  + A+R+ + M+A G  PD +TY  L+ G C
Sbjct: 387 SFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFC 446

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG-RDLF--NNMLRKGLSP 591
           KLG L+EA +LL ++      P+   Y+S++    + G +     DLF  +    + L P
Sbjct: 447 KLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDP 506

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR--RIDQAYG 649
            L     +I      GRL+ A   F  M  +G +P+  TYN LINGLCR R  R+++A+ 
Sbjct: 507 GLCCS--IIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFA 564

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
           L  D+E  G LP+  TYT L    C  G    A+++ +E   R    D   ++AL
Sbjct: 565 LLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTAL 619



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 142/480 (29%), Positives = 233/480 (48%), Gaps = 11/480 (2%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K   +++   +F++M+  G  PDV     +I  L  +G   +A + +  M   G KP+
Sbjct: 340 FAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPN 399

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +VTY T++    K G +  A  ++  M   GC P+ VTY  L+ GF + G L++A  L+ 
Sbjct: 400 VVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLD 459

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALN---LEEEMVTRGVAPTLATYNILIYGLC 359
           ++ K     +   Y+ ++ G  + G +   L+    + +     + P L     +I GLC
Sbjct: 460 ELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCS--IIVGLC 517

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS--GNIGEAFLLFDELRSRNLVPT 417
           K GR+ +A   F  M+ +   PD  +YN L+ G CRS    +  AF L  +L     +P 
Sbjct: 518 KTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPD 577

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
            VTY  L  GLC+ G+++ A ++ E   ++G   DV+ YT +  G C  G +  A   F 
Sbjct: 578 AVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQ 637

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           EM+R+G  PD  AY   I G +K     +A +  +EM+ KG  P + TY  LV  LC  G
Sbjct: 638 EMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAG 697

Query: 538 SLEEANELLRKMVGDG-FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           +++EA      M+  G  +   + Y ++IH   +   +     LF +M+ +G  PT VT 
Sbjct: 698 NVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTS 757

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
             L       G+ E A     EM   G  P+  T+ A+++G   LR+ D++  L   ++E
Sbjct: 758 ASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDG---LRKSDESGKLLKLVQE 814



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 120/357 (33%), Positives = 181/357 (50%), Gaps = 1/357 (0%)

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           TYN L+  L      S       EML+  + P+  S+N L+  + R+    +A   F+ +
Sbjct: 121 TYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIM 180

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP-DVITYTIMVNGSCKMGN 468
           + +   P + T+  L+D LC+ G  E A ++   M+  G +P D   +T MV    K   
Sbjct: 181 KRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKR 240

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
           +  ARE F +M + G  PD  AY T I G  K G   EA ++ + MLAK   P  +TY +
Sbjct: 241 VKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGI 300

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           LV+ LCK G+LE A EL R M   GF P+ + YTS+IH   + G ++    LF+ M+  G
Sbjct: 301 LVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAG 360

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
             P ++T+TV+I      G  E A   F EM   G +PNV+TY  +I GL ++ R+  A+
Sbjct: 361 YRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAF 420

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            +   M   G  P+  TY  L++  C  G   EA +L  E+      P+   +S+L+
Sbjct: 421 RIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLV 477



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 140/294 (47%), Gaps = 36/294 (12%)

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT--------TQIAGE- 498
           G   DV TY  ++N      N S       EML+ G+ P+ F++         T+ A + 
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173

Query: 499 --------------------------LKLGDTSEAYRLQEEMLAKGF-PPDLITYNVLVH 531
                                      K G   +A+ +  EM+A GF PPD   +  +V 
Sbjct: 174 VTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVR 233

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
            L K   ++EA E+  +M   GF PD I Y ++I    + G  +    + +NML K   P
Sbjct: 234 TLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVP 293

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
           T VTY +L+++    G LE A   F  M   G RPN + Y +LI+G  +  R+ +A  LF
Sbjct: 294 TEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLF 353

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            +M E G  P+  T+T++I+  C +GN+++A + ++EM+    +P+  T++ ++
Sbjct: 354 DEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTII 407


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 167/527 (31%), Positives = 276/527 (52%), Gaps = 8/527 (1%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           ++  +++   V  + +R G  PD    N  I  L        A ++ + M E    P+ V
Sbjct: 53  REKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTV 112

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY  ++D   K G + EA+ +L +M  +G SP   TY V+I G S+ G +E+AR +  DM
Sbjct: 113 TYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDM 172

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV----TRGVAPTLATYNILIYGLCK 360
           L  G +  A  Y  +I G ++ G L EAL    +MV     RGV P +  +N++I  LC 
Sbjct: 173 LGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCA 232

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G + DA   +F+ L  ++     ++N L+   C++    EA     ++  R   PT+ T
Sbjct: 233 SGNLEDALA-YFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFT 291

Query: 421 YNTLIDGLCRYGDLEVAQ-QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
           Y +L+DG  + G L+ A  QLKE  + +G +PD +TYT +++G CK+G +    E F+EM
Sbjct: 292 YTSLVDGFLKLGRLDEALLQLKE-AVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEM 350

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
             +G +PD   Y   I G +K     +A+R+  +ML  G     +TYN+++ GLCK G +
Sbjct: 351 RNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRV 410

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
            EA      M   G +   +TY++++      G++    +LF  ML +G  P LV+Y ++
Sbjct: 411 AEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNII 470

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC-RLRRIDQAYGLFIDMEEEG 658
           I      G+L  A+ YF ++  + + P+V T+N+ ++GLC RL  +     LF  M  +G
Sbjct: 471 IRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQG 530

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             PN ++Y+IL++  C AG  +  L ++ EM+ R + PD    + L+
Sbjct: 531 TSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLI 577



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 160/525 (30%), Positives = 261/525 (49%), Gaps = 9/525 (1%)

Query: 205 LPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALE 264
           L D + C  ++  L   G   +A     ++ E    P +V +  +++  C+E  + EA  
Sbjct: 6   LVDTRVCTALLNGLCKTGQLDRA---MLLLDEMPCSPDMVAFTVVINGLCREKRLDEAFS 62

Query: 265 LLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYS 324
           +L      GC P+ VTYNV I G  +   ++ A  L++ M +     +  +Y  ++ G  
Sbjct: 63  VLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLL 122

Query: 325 EKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDII 384
           + G L EA+ + E+MV +G +PTL TY ++I GL K GRV +AR  F +ML     PD  
Sbjct: 123 KAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAF 182

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELR----SRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
            Y  L+ G  + G + EA +  +++     +R + P VV +N +I  LC  G+LE A   
Sbjct: 183 VYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAY 242

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
            + + +   L    T+  +V   CK      A  F  +M  +   P  F YT+ + G LK
Sbjct: 243 FDELDDSLDLTH-FTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLK 301

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
           LG   EA    +E + +GF PD +TY  ++ GLCKLG +EE  E   +M   G+ PD +T
Sbjct: 302 LGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVT 361

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           Y ++I   ++   + +   ++  ML+ G   + VTY +++      GR+  A+  F  M+
Sbjct: 362 YAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAME 421

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
            +G    V+TY+AL++G C    +  A  LF  M + G  PN  +Y I+I   C AG   
Sbjct: 422 ERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLA 481

Query: 681 EALRLYKEMLDREIEPDYCTHSALLLKQLDK-DYKVHAVEYLESL 724
           +A   ++++L R + PD  T ++ L     + D     VE  ES+
Sbjct: 482 KAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESM 526



 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 146/503 (29%), Positives = 251/503 (49%), Gaps = 7/503 (1%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   +++ + +  +M+  G  P +K    +I  L   G   +AR ++  M   G +P   
Sbjct: 123 KAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAF 182

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCS----PNGVTYNVLITGFSRNGELEQARGL 300
            Y  ++    K G++ EAL  L +M   GC+    P+ V +N++I     +G LE A   
Sbjct: 183 VYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAY 242

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
             D L   L ++  ++NP++    +     EA+   ++M  R   PTL TY  L+ G  K
Sbjct: 243 F-DELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLK 301

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            GR+ +A  +  E + +  IPD ++Y +++ G C+ G + E    F E+R+R   P  VT
Sbjct: 302 LGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVT 361

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y  LIDG  +   +  A ++   M+  G +   +TY I+++G CK G ++ A   F  M 
Sbjct: 362 YAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAME 421

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            +G       Y+  + G    G+ S A  L   ML +G  P+L++YN+++ GLC+ G L 
Sbjct: 422 ERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLA 481

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGD-LRRGRDLFNNMLRKGLSPTLVTYTVL 599
           +A     K++     PD  T+ S +H   +  D +  G +LF +M+ +G SP L +Y++L
Sbjct: 482 KAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSIL 541

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           +      G LE+    F EM  +G+ P+V+ +N LI  LC   R+D+A  +F ++E    
Sbjct: 542 MDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSA 601

Query: 660 LPNKYTYTILINENCNAGNWQEA 682
            P+ ++Y  L++        +EA
Sbjct: 602 -PDAWSYWSLLDALSRCERMEEA 623



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 148/517 (28%), Positives = 259/517 (50%), Gaps = 9/517 (1%)

Query: 157 GILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK 216
            IL+ ++  G S   ++K   +++   +K   VE+   +F  ML NG  PD      +I 
Sbjct: 132 AILEQMVEKGNSP--TLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIS 189

Query: 217 VLRDNGFSVKAREVYRMMGE----FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR 272
            L   G   +A      M E     G++P +V +N ++   C  G +++AL    E+   
Sbjct: 190 GLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDD- 248

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA 332
                  T+N L+    +    E+A   ++ M +     +  +Y  ++ G+ + G L EA
Sbjct: 249 SLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEA 308

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
           L   +E V RG  P   TY  +I GLCK GRV +   RF EM  +   PD ++Y  L+ G
Sbjct: 309 LLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDG 368

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
           + ++  I +A  ++ ++     V + VTYN ++DGLC+ G +  A      M  +G +  
Sbjct: 369 FMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVAT 428

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
           V+TY+ +++G C  GN+S A E F  ML +G +P+  +Y   I G  + G  ++AY   E
Sbjct: 429 VVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFE 488

Query: 513 EMLAKGFPPDLITYNVLVHGLC-KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
           ++L +   PD+ T+N  +HGLC +L ++ +  EL   MV  G  P+  +Y+ ++      
Sbjct: 489 KLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRA 548

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
           G L    ++F+ M+ +G++P +V +  LI      GR++ A   F E++ +   P+  +Y
Sbjct: 549 GGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSA-PDAWSY 607

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
            +L++ L R  R+++A  L   M+ +G  P  Y  T+
Sbjct: 608 WSLLDALSRCERMEEARLLSFHMKLQGCAPRHYDLTV 644


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 183/621 (29%), Positives = 320/621 (51%), Gaps = 32/621 (5%)

Query: 90  PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVET 149
           P+ L+  +   R  P  AL FF         +++  ++  I+ +L+ S LL  A +++  
Sbjct: 30  PDSLITTVLNCRS-PWKALEFF-----NAAPEKNIQLYSAIIHVLVGSKLLSHARYLLND 83

Query: 150 VV--CVNMHGILDV--LIGGGLSSCVSIK----ILDLLLLIYTKKSMVEQCLLVFNKMLR 201
           +V   V  H       L    LS   S K    +   L+++  K  +VE+ L +++K+  
Sbjct: 84  LVQNLVKSHKPYHACQLAFSELSRLKSSKFTPNVYGELIIVLCKMELVEEALSMYHKV-- 141

Query: 202 NGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQE 261
            G    ++ CN ++ VL   G       +Y  M   G+ PS++T+ T++D  C++G++  
Sbjct: 142 -GAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLR 200

Query: 262 ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC 321
           A E+  EM+ +G  P  + Y +LI G   + ++E+A  + R M ++G+  + ++YN ++ 
Sbjct: 201 AQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMD 260

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           GY +     +AL L ++M+  G+ P + T+ ILI GLCK+G +  AR+ F  M++ +V P
Sbjct: 261 GYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTP 320

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           +I  YN+L+  YC+ G++ EA  LF EL    + P V TY+ LI GLC     E A  + 
Sbjct: 321 NIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIF 380

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
           E M  +GIL + +TY  +++G CK G +  A E  ++M   G++P+   ++T I G  K+
Sbjct: 381 EKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKI 440

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
            +   A  +  EM+ K   PD++TY  ++ G CK GS++EA +L   M+ +G  P+  T 
Sbjct: 441 RNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTI 500

Query: 562 TSIIHASLEMGDLRRGRDLFN----------NMLRKGLSPTL---VTYTVLIHAHAARGR 608
           + ++    + G +    +LF           N+   G  P+L   V YT LIH     G+
Sbjct: 501 SCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQ 560

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
              A   FS+M+  G++P+ + Y  ++ GL +++ I     L  DM + G++PN   + I
Sbjct: 561 FSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQVKYILMM--LHADMLKFGVIPNSAVHVI 618

Query: 669 LINENCNAGNWQEALRLYKEM 689
           L      +G  + A    K++
Sbjct: 619 LCECYQESGFLKSAQNCSKDL 639



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 147/473 (31%), Positives = 251/473 (53%), Gaps = 16/473 (3%)

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           Y  ++   CK   ++EAL +  ++   G +      NVL+    + G  E    +  +M+
Sbjct: 118 YGELIIVLCKMELVEEALSMYHKV---GAALTIQACNVLLYVLVKTGRFELLWRIYEEMI 174

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
             GL  S  ++  +I G   +G L+ A  + +EM  +G+ PT+  Y ILI GLC   ++ 
Sbjct: 175 SNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIE 234

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
           +A      M    V P++ +YNTL+ GYC+  N  +A  L+ ++    LVP VVT+  LI
Sbjct: 235 EAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILI 294

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           DGLC++G+++ A+ L  NMI   + P++  Y  +++  CK+G++S A   F E+ R  + 
Sbjct: 295 DGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVS 354

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           PD F Y+  I G   +  T EA  + E+M  +G   + +TYN L+ G CK G +++A E+
Sbjct: 355 PDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEI 414

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
             +M  +G  P+ IT++++I    ++ +L+    +++ M+ K LSP +VTYT +I  H  
Sbjct: 415 CSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCK 474

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE--------- 656
            G ++ A   +S+M   GI PN  T + L++GLC+  +I  A  LF +  E         
Sbjct: 475 YGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVD 534

Query: 657 ----EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
               +  L N   YT LI+  C  G + +A++L+ +M    ++PD   +  +L
Sbjct: 535 AGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVML 587



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 134/432 (31%), Positives = 233/432 (53%), Gaps = 5/432 (1%)

Query: 260 QEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI 319
           Q A   L  ++    +PN   Y  LI    +   +E+A  +     K+G  ++  + N +
Sbjct: 99  QLAFSELSRLKSSKFTPN--VYGELIIVLCKMELVEEALSMYH---KVGAALTIQACNVL 153

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           +    + G       + EEM++ G++P++ T+  LI G C+ G +  A+  F EM  K +
Sbjct: 154 LYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGI 213

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
           +P +I Y  L+ G C    I EA  +   +R   + P V TYNTL+DG C+  + + A +
Sbjct: 214 VPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALR 273

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           L ++M+ +G++PDV+T+ I+++G CK G +  AR  F  M++  + P+   Y + I    
Sbjct: 274 LYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYC 333

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           K+GD SEA  L  E+      PD+ TY++L+ GLC +   EEA  +  KM  +G + + +
Sbjct: 334 KVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSV 393

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
           TY S+I    + G + +  ++ + M   G+ P ++T++ LI  +     L+ A   +SEM
Sbjct: 394 TYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEM 453

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
            +K + P+V+TY A+I+G C+   + +A  L+ DM + GI PN YT + L++  C  G  
Sbjct: 454 VIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKI 513

Query: 680 QEALRLYKEMLD 691
            +AL L+ E ++
Sbjct: 514 SDALELFTEKIE 525



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 133/406 (32%), Positives = 216/406 (53%), Gaps = 4/406 (0%)

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
           K + + Y  +I    +  L+ EAL++  ++   G A T+   N+L+Y L K GR      
Sbjct: 112 KFTPNVYGELIIVLCKMELVEEALSMYHKV---GAALTIQACNVLLYVLVKTGRFELLWR 168

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
            + EM+   + P +I++ TL+ G CR G++  A  +FDE+R + +VPTV+ Y  LI GLC
Sbjct: 169 IYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLC 228

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
               +E A+ +   M   G+ P+V TY  +++G CK+ N   A   + +ML +GL PD  
Sbjct: 229 SDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVV 288

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
            +   I G  K G+   A  L   M+     P++  YN L+   CK+G + EA  L  ++
Sbjct: 289 TFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLEL 348

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRL 609
                 PD  TY+ +I     +       ++F  M ++G+    VTY  LI      G++
Sbjct: 349 ERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKM 408

Query: 610 ELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL 669
           + A    S+M   G+ PNVIT++ LI+G C++R +  A G++ +M  + + P+  TYT +
Sbjct: 409 DKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAM 468

Query: 670 INENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKV 715
           I+ +C  G+ +EAL+LY +MLD  I P+ C   + LL  L KD K+
Sbjct: 469 IDGHCKYGSMKEALKLYSDMLDNGITPN-CYTISCLLDGLCKDGKI 513


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 175/636 (27%), Positives = 325/636 (51%), Gaps = 14/636 (2%)

Query: 86  VVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYW 145
           V+    LL  + +  R    + + F R  E   G   D   + T+L+ + + G    + W
Sbjct: 138 VIVVSSLLRGLCDAKRTDEAVDVLFHRMPEL--GCVPDAISYSTVLKSVCDDG---RSQW 192

Query: 146 VVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLL 205
            ++ +        + V  GGG   C  +    ++  ++ +  + E C L F++M + G+ 
Sbjct: 193 ALDILR-------MAVKQGGG-CPCNVVVYSTVVHGLFKEGKVGEACDL-FHEMTQQGVP 243

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P+V   N +I  L       KA+ + R M   G++P  VTYNT++  +   G+ ++A+ +
Sbjct: 244 PNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRM 303

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
             EM  RG  PN VT +  +    ++G +E+AR     ML  G K++  SY+ ++ GY+ 
Sbjct: 304 FKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYAT 363

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
            G LV+  NL   MV  G+ P    +NIL+ G  K G V +A   F +M ++ + PD+++
Sbjct: 364 AGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLT 423

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           Y  +++ +CR G++ +A   F+ +  + + P    Y  LI G C +GDL  A++L   + 
Sbjct: 424 YLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIR 483

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
           N+G+ P ++++  ++N  CK G +  A+  F+ ++R G + D   +T+ I G   +G  S
Sbjct: 484 NKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMS 543

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           EA+R+ + M++ G  PD++TY  LV+G CK G +++   L R+++  G  P   TY  I+
Sbjct: 544 EAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIIL 603

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
                 G     +++F  M+  G++ T+ TY++L+         E A   F ++    ++
Sbjct: 604 DGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVK 663

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
            +++  N +I+ + + RR ++A GLF  + + G++P   TYTI++      G+ +EA  +
Sbjct: 664 FDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGV 723

Query: 686 YKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYL 721
           +  ML   + P     + ++   L+K   V A  Y+
Sbjct: 724 FSVMLKSGLSPTSHFINVIVRTLLEKGEIVKAGIYM 759



 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 142/538 (26%), Positives = 258/538 (47%), Gaps = 73/538 (13%)

Query: 241 PSIVTYNTMLDSFCKEGEM-----------------------------------QEALEL 265
           P++ TY+ ++D  C+   +                                    EA+++
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160

Query: 266 LWE-MQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL--GLKVSAHSYNPIICG 322
           L+  M   GC P+ ++Y+ ++     +G  + A  ++R  +K   G   +   Y+ ++ G
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHG 220

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
             ++G + EA +L  EM  +GV P + TYN +I+ LCK   V  A+    +M+   V PD
Sbjct: 221 LFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPD 280

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
            ++YNTL++GY   G   +A  +F E+ SR ++P  VT +T +  LC++G +E A++  +
Sbjct: 281 NVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFD 340

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
           +M+ +G   ++I+Y+ +++G    G L      FN M+R G+ P++  +   + G  K G
Sbjct: 341 SMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCG 400

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
              EA  + E+M  +G  PD++TY  ++H  C++GS+++A +    M+  G  P+   Y 
Sbjct: 401 MVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQ 460

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT--------------------------- 595
            +I      GDL +  +L   +  KGL P +++                           
Sbjct: 461 CLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRT 520

Query: 596 --------YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
                   +T LI  +   G++  AF     M   GI P+++TY  L+NG C+  RID  
Sbjct: 521 GEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDG 580

Query: 648 YGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             LF ++  +G+ P  +TY I+++   +AG    A  +++EM++  I     T+S LL
Sbjct: 581 LILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILL 638



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 152/570 (26%), Positives = 266/570 (46%), Gaps = 14/570 (2%)

Query: 116 TQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKI 175
           TQ GV  +   + +++  L ++  +  A             GIL  ++G G+        
Sbjct: 238 TQQGVPPNVVTYNSVIHALCKARAVDKA------------QGILRQMVGNGVQP--DNVT 283

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
            + L+  Y+     +Q + +F +M   G++P+   C+  +  L  +G   +ARE +  M 
Sbjct: 284 YNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSML 343

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
             G K +I++Y+T+L  +   G + +   L   M   G  PN   +N+L+ G+++ G + 
Sbjct: 344 AKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVR 403

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
           +A  +  DM K GL     +Y  +I  +   G + +A++    M+ +GV P  A Y  LI
Sbjct: 404 EAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLI 463

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
            G C  G +  A    +E+  K + P I+S+ +L+   C+ G + EA  +FD +      
Sbjct: 464 QGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEK 523

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
             V  + +LIDG C  G +  A ++ + M++ GI PD++TY  +VNG CK G +      
Sbjct: 524 ADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLIL 583

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
           F E+L KG++P  F Y   + G    G T+ A  + +EM+  G    + TY++L+ GLC+
Sbjct: 584 FRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCR 643

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
               EEA  + +K+       D +    +I    +         LF ++   GL PT+ T
Sbjct: 644 NNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQT 703

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           YT+++      G +E A   FS M   G+ P     N ++  L     I +A      ++
Sbjct: 704 YTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKAGIYMCRVD 763

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRL 685
            + IL    T ++L++     G  +E L L
Sbjct: 764 GKSILFEASTASMLLSLFSCKGKHREHLNL 793



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 193/367 (52%), Gaps = 3/367 (0%)

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
           R   PT+ TY+ILI   C+  R+  A   F  +LR+ +  D+I  ++LL G C +    E
Sbjct: 97  RVALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDE 156

Query: 402 AF-LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ--GILPDVITYTI 458
           A  +LF  +     VP  ++Y+T++  +C  G  + A  +    + Q  G   +V+ Y+ 
Sbjct: 157 AVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYST 216

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           +V+G  K G +  A + F+EM ++G+ P+   Y + I    K     +A  +  +M+  G
Sbjct: 217 VVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNG 276

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
             PD +TYN L+HG   LG  ++A  + ++M   G IP+ +T ++ +    + G +   R
Sbjct: 277 VQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAR 336

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           + F++ML KG    +++Y+ L+H +A  G L      F+ M   GI PN   +N L+NG 
Sbjct: 337 EFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGY 396

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
            +   + +A  +F DM++ G+ P+  TY  +I+  C  G+  +A+  +  M+D+ +EP++
Sbjct: 397 AKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNF 456

Query: 699 CTHSALL 705
             +  L+
Sbjct: 457 AVYQCLI 463



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 169/346 (48%), Gaps = 42/346 (12%)

Query: 402 AFLLFDELRS----RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
           A  LF+ + +    R  +PTV TY+ LID  CR   L++A      ++ QG+  DVI  +
Sbjct: 83  AVALFNRMSTGTGPRVALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVS 142

Query: 458 IMVNGSCKMGNLSMARE-FFNEMLRKGLQPDRFA-------------------------- 490
            ++ G C       A +  F+ M   G  PD  +                          
Sbjct: 143 SLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVK 202

Query: 491 -----------YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
                      Y+T + G  K G   EA  L  EM  +G PP+++TYN ++H LCK  ++
Sbjct: 203 QGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAV 262

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           ++A  +LR+MVG+G  PD++TY ++IH    +G  ++   +F  M  +G+ P  VT +  
Sbjct: 263 DKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTF 322

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           +      GR+E A  +F  M  KG + N+I+Y+ L++G      +     LF  M  +GI
Sbjct: 323 VAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGI 382

Query: 660 LPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +PN++ + IL+N     G  +EA+ ++++M  R + PD  T+ A++
Sbjct: 383 VPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVI 428


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  286 bits (733), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 172/531 (32%), Positives = 263/531 (49%), Gaps = 4/531 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V+N+M   G+ PDV   N +IK L        A  +   M    + P   T+ T++  F 
Sbjct: 182 VYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFI 241

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           +EG ++ AL +  +M   GCSP  VT NVLI G+ + G +E A G I+  +  G +    
Sbjct: 242 EEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQV 301

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +YN  +    + G +  AL + + M+  G  P + TYN +I  L K G + +A+    +M
Sbjct: 302 TYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQM 361

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           + +  +PD  ++NTL+   C    + EA  L  EL  + L P V T+N LI+ LC+ GD 
Sbjct: 362 VDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDP 421

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
            +  +L E M + G  PD +TY I+++  C MG L  A +   EM   G       Y T 
Sbjct: 422 HLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTI 481

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I    K     EA  + ++M A G     +T+N L+ GLCK   +++A EL+ +MV +G 
Sbjct: 482 IDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGL 541

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            P +ITY SI+    + GDL++  D+   M   G    +VTY  LI+     GR ++A  
Sbjct: 542 QPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALK 601

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
               M++KGIRP    YN +I  L R   +  A  LF +M E G  P+  TY I+    C
Sbjct: 602 LLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLC 661

Query: 675 NAGN-WQEALRLYKEMLDREIEPDYCTHSAL---LLKQLDKDYKVHAVEYL 721
             G   +EA     EM+++   P++ +   L   LL     DY + A+E +
Sbjct: 662 RGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGMDDYLISAIELI 712



 Score =  263 bits (672), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 152/508 (29%), Positives = 251/508 (49%)

Query: 194 LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
           LV N++   G+  D    N ++ VL +         VY  M + GI+P +VT NT++ + 
Sbjct: 146 LVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKAL 205

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           C+  +++ A+ +L EM     +P+  T+  L+ GF   G +E A  +   M++ G   + 
Sbjct: 206 CRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTR 265

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
            + N +I GY + G + +AL   ++ +  G  P   TYN  ++ LC+ G VS A      
Sbjct: 266 VTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDL 325

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           ML++   PD+ +YNT++    ++G + EA  + +++  R  +P   T+NTLI  LC    
Sbjct: 326 MLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNR 385

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           LE A  L   +  +G+ PDV T+ I++N  CK+G+  +    F EM   G  PD   Y  
Sbjct: 386 LEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNI 445

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            I     +G    A  L +EM + G P   +TYN ++  LCK   +EEA E+  +M   G
Sbjct: 446 LIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHG 505

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
                +T+ ++I    +   +    +L   M+++GL P+ +TY  ++  +  +G L+ A 
Sbjct: 506 ISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAA 565

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
                M   G   +V+TY  LINGLC+  R   A  L   M  +GI P    Y  +I   
Sbjct: 566 DILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSL 625

Query: 674 CNAGNWQEALRLYKEMLDREIEPDYCTH 701
               N ++AL L++EM +    PD  T+
Sbjct: 626 FRRNNLRDALSLFREMTEVGEPPDALTY 653



 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 158/560 (28%), Positives = 261/560 (46%), Gaps = 15/560 (2%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           GV+ D  V+  +L +L E   ++             +  + + +   G+     +  L+ 
Sbjct: 155 GVQADTAVYNHLLNVLAEGSRMKL------------LESVYNEMTDRGIQP--DVVTLNT 200

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+    +   V   +L+  +M  + + PD      +++   + G    A  V   M E G
Sbjct: 201 LIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETG 260

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
             P+ VT N +++ +CK G +++AL  + +    G  P+ VTYN  +    +NG +  A 
Sbjct: 261 CSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHAL 320

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            ++  ML+ G      +YN +I   S+ G L EA  +  +MV RG  P   T+N LI  L
Sbjct: 321 KVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVAL 380

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C   R+ +A     E+  K + PD+ ++N L+   C+ G+      LF+E++S    P  
Sbjct: 381 CSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDE 440

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           VTYN LID LC  G L  A  L + M + G     +TY  +++  CK   +  A E F++
Sbjct: 441 VTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQ 500

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M   G+      + T I G  K     +A  L E+M+ +G  P  ITYN ++   CK G 
Sbjct: 501 MDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGD 560

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           L++A ++L  M  +GF  D +TY ++I+   + G  +    L   M  KG+ PT   Y  
Sbjct: 561 LKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNP 620

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR-LRRIDQAYGLFIDMEEE 657
           +I +   R  L  A   F EM   G  P+ +TY  +  GLCR    I +A+   ++M  +
Sbjct: 621 VIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNK 680

Query: 658 GILPNKYTYTILINENCNAG 677
           G +P   ++ +L     N G
Sbjct: 681 GFMPEFSSFRMLAEGLLNLG 700



 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 149/520 (28%), Positives = 247/520 (47%), Gaps = 2/520 (0%)

Query: 208 VKNCNRIIKVLRDNGFSVKAREVYR-MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELL 266
           + + +R++  LR+      A ++    +      PS   Y  ++      G       L+
Sbjct: 53  ISDQDRLLTALREQADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLV 112

Query: 267 WEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK-LGLKVSAHSYNPIICGYSE 325
            EM+  G           +  ++R    + A  L+R+ L   G++     YN ++   +E
Sbjct: 113 REMRREGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAE 172

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
              +    ++  EM  RG+ P + T N LI  LC+  +V  A     EM    V PD  +
Sbjct: 173 GSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETT 232

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           + TL+ G+   G+I  A  +  ++      PT VT N LI+G C+ G +E A    +  I
Sbjct: 233 FTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEI 292

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
             G  PD +TY   V+  C+ G++S A +  + ML++G  PD F Y T I    K G+  
Sbjct: 293 ADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELD 352

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           EA  +  +M+ +G  PD  T+N L+  LC    LEEA +L R++   G  PD  T+  +I
Sbjct: 353 EAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILI 412

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
           +A  ++GD   G  LF  M   G +P  VTY +LI    + G+L  A     EM+  G  
Sbjct: 413 NALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCP 472

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
            + +TYN +I+ LC+  RI++A  +F  M+  GI  +  T+  LI+  C A    +A  L
Sbjct: 473 RSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATEL 532

Query: 686 YKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
            ++M+   ++P   T++++L     +     A + LE++T
Sbjct: 533 IEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMT 572



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 139/477 (29%), Positives = 215/477 (45%), Gaps = 37/477 (7%)

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLW-EMQGRGCSPNGVTYNVLITGF 288
           V   +  FG++     YN +L+    EG   + LE ++ EM  RG  P+ VT N LI   
Sbjct: 147 VRNQLNTFGVQADTAVYNHLLNVLA-EGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKAL 205

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
            R  ++  A  ++                                   EEM +  VAP  
Sbjct: 206 CRAHQVRTAVLML-----------------------------------EEMSSHAVAPDE 230

Query: 349 ATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDE 408
            T+  L+ G  + G +  A     +M+     P  ++ N L+ GYC+ G + +A     +
Sbjct: 231 TTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQK 290

Query: 409 LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
             +    P  VTYNT +  LC+ G +  A ++ + M+ +G  PDV TY  ++N   K G 
Sbjct: 291 EIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGE 350

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
           L  A+   N+M+ +G  PD   + T I          EA  L  E+  KG  PD+ T+N+
Sbjct: 351 LDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNI 410

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           L++ LCK+G       L  +M   G  PD +TY  +I     MG L    DL   M   G
Sbjct: 411 LINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNG 470

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
              + VTY  +I A   + R+E A   F +M   GI  + +T+N LI+GLC+ +RID A 
Sbjct: 471 CPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDAT 530

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            L   M +EG+ P+  TY  ++   C  G+ ++A  + + M     E D  T+  L+
Sbjct: 531 ELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLI 587



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 83/330 (25%), Positives = 142/330 (43%), Gaps = 13/330 (3%)

Query: 404 LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
           +L   L   +  P+   Y  +I  L   G  ++ + L   M  +G           V   
Sbjct: 75  MLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVESY 134

Query: 464 CKMGNLSMAREFF-NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ------EEMLA 516
            ++     A +   N++   G+Q D   Y         L   +E  R++       EM  
Sbjct: 135 ARLRRFDDAVDLVRNQLNTFGVQADTAVYNHL------LNVLAEGSRMKLLESVYNEMTD 188

Query: 517 KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
           +G  PD++T N L+  LC+   +  A  +L +M      PD  T+T+++   +E G +  
Sbjct: 189 RGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEA 248

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
              +   M+  G SPT VT  VLI+ +   GR+E A  Y  +    G  P+ +TYN  ++
Sbjct: 249 ALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVH 308

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
            LC+   +  A  +   M +EG  P+ +TY  +IN     G   EA  +  +M+DR   P
Sbjct: 309 CLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLP 368

Query: 697 DYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
           D  T + L++    ++    A++    LT+
Sbjct: 369 DTTTFNTLIVALCSQNRLEEALDLARELTV 398


>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
          Length = 1014

 Score =  286 bits (733), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 169/551 (30%), Positives = 274/551 (49%), Gaps = 34/551 (6%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +E  L + + M+R G +P   NC+ +I  LR      +A  +   +G+ G+ P++  YN 
Sbjct: 284 LEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNA 343

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++D  CK     +A  L  EM GRG  PN VTY +LI    + G +E A  L   M   G
Sbjct: 344 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 403

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           +KV+ + YN +I GY ++G L  A  L   MV  G+ PT A+Y+ LI GLC+ G +S A 
Sbjct: 404 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAM 463

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               EM  + +  +  ++  L+ G+C+   + EA  LFD++   N++P  VT+N +I+G 
Sbjct: 464 ELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY 523

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C  G++  A QL + M+  G+ PD  TY  +++G C    +S A EF  ++       + 
Sbjct: 524 CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNN 583

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
           F+ T  + G  + G  +E Y L +EM  +G   DL+++ ++V+   K    E++  L R+
Sbjct: 584 FSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFRE 643

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M   G  PD I YT +I A  +  ++ +  + ++ M+  G SP  VT+TVLI+     G 
Sbjct: 644 MKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGY 703

Query: 609 LELAFMYFSEMQVKGIRPNVITYNA----------------------------------L 634
           L  A +   EM    + PN  TYN                                   L
Sbjct: 704 LGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNIL 763

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           I GLC+  +I +A  L   + E G  P+  +Y+ +I+E C  G+  +A  L+ EML + +
Sbjct: 764 IKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGL 823

Query: 695 EPDYCTHSALL 705
           +PD   ++  +
Sbjct: 824 KPDVVAYNIFI 834



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 151/539 (28%), Positives = 277/539 (51%), Gaps = 16/539 (2%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           A R F+ +  + G++ +E  +  ++  L + G+       +E  +C     + D +   G
Sbjct: 357 ADRLFKEMAGR-GLEPNEVTYAILIHALCKRGM-------IEDALC-----LFDKMRDKG 403

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
           +   V++   + L+  Y K+  +++   + + M++ GL P   + + +I  L  NG    
Sbjct: 404 IK--VTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSS 461

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A E++R M E GI  +  T+  +++ FCK+ +M EA  L  +M      PN VT+NV+I 
Sbjct: 462 AMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIE 521

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G+   G + +A  L   M+++GLK   ++Y  +I G      + +A     ++       
Sbjct: 522 GYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVL 581

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
              +   L+YGL + GR ++  H + EM  + V  D++S+  ++Y   +  +  ++ +LF
Sbjct: 582 NNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLF 641

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
            E++ + + P  + Y  +ID L +  ++  A    + M+  G  P+ +T+T+++N  CK 
Sbjct: 642 REMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKS 701

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G L  A     EML   + P++F Y   +      GD  +A  L   ML +G    ++++
Sbjct: 702 GYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSF 760

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           N+L+ GLCK G ++EA +L+RK+   GF PD I+Y++IIH   +MGD+ +  +L+N ML 
Sbjct: 761 NILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLY 820

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
           KGL P +V Y + I      G  + A   ++ M   G++PN  TY AL++G+  +   D
Sbjct: 821 KGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMLHYD 879



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 134/514 (26%), Positives = 245/514 (47%), Gaps = 35/514 (6%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           AR+++  M + G+      Y   + ++C+   +  A  L+  M+  G   + V YNVL+ 
Sbjct: 182 ARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMY 241

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G  +N  +++A  +   M+ +G+     +Y  ++ G+     L  AL +  +M+  G  P
Sbjct: 242 GLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVP 301

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
           + A  + +I  L K   V +A     ++    ++P++ +YN L+   C++    +A  LF
Sbjct: 302 SEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLF 361

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
            E+  R L P  VTY  LI  LC+ G +E A  L + M ++GI   V  Y  ++NG CK 
Sbjct: 362 KEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQ 421

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G+L  AR   + M+++GL P   +Y+  IAG  + GD S A  L  EM  +G   +  T+
Sbjct: 422 GSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTF 481

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
             L++G CK   ++EA  L  KM+    IP+ +T+  +I     +G++R+   L++ M+ 
Sbjct: 482 TALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVE 541

Query: 587 KGLSPTLVTY-----------------------------------TVLIHAHAARGRLEL 611
            GL P   TY                                   T L++     GR   
Sbjct: 542 MGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTE 601

Query: 612 AFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
            +  + EM V+G++ +++++  ++    +    +++  LF +M+E+G+ P+   YT +I+
Sbjct: 602 TYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMID 661

Query: 672 ENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
                 N  +AL  + +M+     P+  TH+ L+
Sbjct: 662 ALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLI 695



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 35/226 (15%)

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
           L+ G   +  T + ++  L K+     A +L  KM+  G   D   YT+ I A  E  +L
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
              R L   M  +G+  + V Y VL++      R++ A    + M   G+  + +TY  L
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 635 INGLCRLRR-----------------------------------IDQAYGLFIDMEEEGI 659
           + G CR+                                     +++A+ L   + + G+
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 660 LPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +PN + Y  LI++ C    + +A RL+KEM  R +EP+  T++ L+
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILI 380


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  286 bits (733), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 161/488 (32%), Positives = 259/488 (53%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           ++  + +FN ++    LP V   N II  +        A  + + M   G+ PSI T + 
Sbjct: 65  IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSI 124

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
            ++ +C  GEM  A  +L  +  RG  PN +T   ++ G   NGE+++A     ++   G
Sbjct: 125 WINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQG 184

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           + +    Y  +I G  + G  ++A  L +EM  + V P +  YN++I   CK      AR
Sbjct: 185 MLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKAR 244

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             + +++   + PDI++Y +L+ G+CR+G  GE   L  E+ ++N+ P V T+N LID  
Sbjct: 245 DLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAF 304

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           CR G +  AQ +   M+ +G  PD++T+  +++G C  GN+  AR+ F+ +  +G+ PD 
Sbjct: 305 CRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDV 364

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
           ++YT  I G  K     EA  L  EM  K    D++ Y+ L+ GLCK G +  A EL   
Sbjct: 365 WSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFST 424

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           +  DG  P+ ITY  +I A  ++ D+  G +LF  M  KGL+PT++TY +LI+ +    R
Sbjct: 425 INNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKR 484

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           +  A    S MQ K + P+ ITYN+L +GLC+  RI  A+ LF  M   G   +  TY +
Sbjct: 485 IREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNV 544

Query: 669 LINENCNA 676
           L++  C A
Sbjct: 545 LLDAFCKA 552



 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 138/465 (29%), Positives = 242/465 (52%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PS++ +NT++ S  K      A+ LL +M  +G +P+  T ++ I  +   GE+  A  +
Sbjct: 82  PSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSV 141

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  +LK G + +  +   ++ G    G + +A++  + +  +G+      Y  LI GLCK
Sbjct: 142 LGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCK 201

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            GR  DA     EM  + V P+I+ YN ++  +C+     +A  L+ ++    + P ++T
Sbjct: 202 IGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILT 261

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y +LI G CR G     +QL   M+N+ I P+V T+ ++++  C+ G +  A+  FN M+
Sbjct: 262 YTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMV 321

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           ++G QPD   + T I+G    G+  EA +L + +  +G  PD+ +Y +L+ G CK   ++
Sbjct: 322 KRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRID 381

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA  L  +M     + D + Y+S+I    + G +    +LF+ +   G  P ++TY +LI
Sbjct: 382 EAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILI 441

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
            A      +++    F  M  KG+ P V+TYN LING C+ +RI +A  L   M+ + + 
Sbjct: 442 DAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLA 501

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           P+  TY  L +  C +G   +A  L+K M       D  T++ LL
Sbjct: 502 PDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLL 546



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 134/386 (34%), Positives = 208/386 (53%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V++ +   + +   G+L D      +I  L   G S+ A ++ + M    +KP+IV YN 
Sbjct: 170 VQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNM 229

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++DSFCK+    +A +L  ++   G  P+ +TY  LI GF R G+  + + L+ +M+   
Sbjct: 230 IIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKN 289

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           +  + +++N +I  +  KG ++EA  +   MV RG  P + T+N LI G C  G V +AR
Sbjct: 290 INPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEAR 349

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F  +  + ++PD+ SY  L+ GYC+   I EA  LF+E+R +N+V  +V Y++LIDGL
Sbjct: 350 KLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGL 409

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G +  A +L   + N G  P+VITY I+++  CK+ ++ M  E F  M  KGL P  
Sbjct: 410 CKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTV 469

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             Y   I G  K     EA  L   M +K   PD ITYN L  GLCK G + +A EL + 
Sbjct: 470 LTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKV 529

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDL 574
           M   G   D  TY  ++ A  +  D+
Sbjct: 530 MHVGGPPVDVATYNVLLDAFCKAQDV 555



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 185/375 (49%)

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
           +A+ L   ++     P++  +N +I  + K      A     +M+ K V P I + +  +
Sbjct: 67  DAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWI 126

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
             YC  G +G AF +   +  R   P  +T  T++ GLC  G+++ A    +N+  QG+L
Sbjct: 127 NCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGML 186

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
            D + Y  ++NG CK+G    A +   EM  + ++P+   Y   I    K   T +A  L
Sbjct: 187 LDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDL 246

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
             +++  G  PD++TY  L+ G C+ G   E  +L+ +MV     P+  T+  +I A   
Sbjct: 247 YLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCR 306

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
            G +   + +FN M+++G  P +VT+  LI  H   G +  A   F  +  +GI P+V +
Sbjct: 307 KGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWS 366

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           Y  LI G C+ +RID+A  LF +M  + ++ +   Y+ LI+  C +G    A  L+  + 
Sbjct: 367 YTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTIN 426

Query: 691 DREIEPDYCTHSALL 705
           +    P+  T++ L+
Sbjct: 427 NDGPPPNVITYNILI 441



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 105/335 (31%), Positives = 167/335 (49%), Gaps = 35/335 (10%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P++   N II     +  + KAR++Y  + + GI P I+TY +++  FC+ G+  E  +L
Sbjct: 222 PNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQL 281

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           + EM  +  +PN  T+NVLI  F R G++ +A+G+   M+K G +    ++N +I G+  
Sbjct: 282 MCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCL 341

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
            G ++EA  L + +  RG+ P + +Y ILI G CK  R+ +A   F EM  KN++ DI+ 
Sbjct: 342 HGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVL 401

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRS---------------------------------- 411
           Y++L+ G C+SG I  A+ LF  + +                                  
Sbjct: 402 YSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMC 461

Query: 412 -RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
            + L PTV+TYN LI+G C+   +  A  L   M ++ + PD ITY  + +G CK G +S
Sbjct: 462 GKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRIS 521

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
            A E F  M   G   D   Y   +    K  D +
Sbjct: 522 DAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDVA 556



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 181/348 (52%)

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           L  +  + DA   F  ++    +P +I +NT++    +  +   A  L  ++  + + P+
Sbjct: 59  LSSFNGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPS 118

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           + T +  I+  C  G++  A  +   ++ +G  P+ IT T ++ G C  G +  A +F +
Sbjct: 119 IFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHD 178

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            +  +G+  D   Y T I G  K+G + +A++L +EM  +   P+++ YN+++   CK  
Sbjct: 179 NVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDE 238

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
              +A +L  K+V  G  PD +TYTS+I      G     + L   M+ K ++P + T+ 
Sbjct: 239 LTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFN 298

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           VLI A   +G++  A   F+ M  +G +P+++T+N LI+G C    + +A  LF  + E 
Sbjct: 299 VLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFER 358

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           GILP+ ++YTILI   C      EA+ L+ EM  + +  D   +S+L+
Sbjct: 359 GILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLI 406



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 171/337 (50%), Gaps = 10/337 (2%)

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
           RFF    K     + S+N           I +A  LF+ L +   +P+V+ +NT+I  + 
Sbjct: 46  RFFSHCPKQNAKILSSFN----------GIDDAVTLFNHLINMQPLPSVIQFNTIIGSVV 95

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
           +     VA  L + M+ +G+ P + T +I +N  C +G +  A      +L++G QP+  
Sbjct: 96  KMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNI 155

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
             TT + G    G+  +A    + + A+G   D + Y  L++GLCK+G   +A +LL++M
Sbjct: 156 TLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEM 215

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRL 609
            G    P+ + Y  II +  +     + RDL+  ++  G+ P ++TYT LI      G+ 
Sbjct: 216 EGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQW 275

Query: 610 ELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL 669
                   EM  K I PNV T+N LI+  CR  ++ +A G+F  M + G  P+  T+  L
Sbjct: 276 GEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTL 335

Query: 670 INENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
           I+ +C  GN  EA +L+  + +R I PD  +++ L++
Sbjct: 336 ISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILII 372


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  286 bits (732), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 170/561 (30%), Positives = 283/561 (50%), Gaps = 16/561 (2%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +L+  +   S +   L  F K+ + G  P V   N ++  L       +A +++  M   
Sbjct: 121 ILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM--- 177

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
             KP++VT+ T+++  C+EG + EA+ LL  M   G  PN +TY  ++ G  + G+   A
Sbjct: 178 -CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSA 236

Query: 298 RGLIRDMLKLGLKV-SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
             L+R M ++   + +   YN II G  + G   +A NL  EM  + + P + TYN +I 
Sbjct: 237 LNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMIN 296

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           G C  GR SDA     EML + + PD+++++ L+  + + G   EA  L+DE+  R+++P
Sbjct: 297 GFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIP 356

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
           + VTY+++IDG C+   L+ A+ +      +G  PD+IT+  ++ G C+   +    +  
Sbjct: 357 STVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLL 416

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           +EM   GL  +   YTT I G  ++GD + A  L +EM++ G  P+++T N L+ GLC  
Sbjct: 417 HEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDN 476

Query: 537 GSLEEANELLRKMVG-----------DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           G L++A E+ + M             +G  PD  TY  +I   +  G      +L+  M 
Sbjct: 477 GKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMP 536

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
            +G+ P  +TY+ +I     + RL+ A   F  M  K   P+V+T+N LI G C+   +D
Sbjct: 537 HRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVD 596

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
               LF +M + GI+ +  TY  LI       N   AL +++EM+   + PD  T   +L
Sbjct: 597 DGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNML 656

Query: 706 LKQLDKDYKVHAVEYLESLTL 726
                K+    AV  LE L +
Sbjct: 657 TGLWSKEELERAVAMLEDLQM 677



 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 161/560 (28%), Positives = 268/560 (47%), Gaps = 43/560 (7%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           ++  + +F  M+R+  LP V +  +++ V+   G       +++ M    +  +  ++  
Sbjct: 62  LDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTI 121

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI----------------------- 285
           ++  FC   ++  AL    ++   G  P  VT+N L+                       
Sbjct: 122 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCKPN 181

Query: 286 --------TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
                    G  R G + +A  L+  ML+ GL+ +  +Y  I+ G  + G  V ALNL  
Sbjct: 182 VVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLR 241

Query: 338 EM-VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS 396
           +M     + P +  YN +I GL K GR SDA + F EM  K + PDI++YN ++ G+C S
Sbjct: 242 KMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCIS 301

Query: 397 GNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
           G   +A  L  E+  R + P VVT++ LI+   + G    A++L + M+ + I+P  +TY
Sbjct: 302 GRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTY 361

Query: 457 TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA 516
           + M++G CK   L  A   F     KG  PD   + T IAG  +     +  +L  EM  
Sbjct: 362 SSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTE 421

Query: 517 KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
            G   + ITY  L+HG C++G L  A +LL++M+  G  P+ +T  +++    + G L+ 
Sbjct: 422 AGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKD 481

Query: 577 GRDLFNNMLRK-----------GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
             ++F  M +            G+ P + TY +LI      G+   A   + EM  +GI 
Sbjct: 482 ALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIV 541

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           P+ ITY+++I+GLC+  R+D+A  +F  M  +   P+  T+  LI   C AG   + L L
Sbjct: 542 PDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLEL 601

Query: 686 YKEMLDREIEPDYCTHSALL 705
           + EM  R I  D  T+  L+
Sbjct: 602 FCEMGQRGIVADAITYITLI 621



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 123/376 (32%), Positives = 201/376 (53%), Gaps = 5/376 (1%)

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           ++ IL+   C   ++  A   F ++ +    P ++++NTLL+G C    I EA  LF ++
Sbjct: 118 SFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM 177

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
                 P VVT+ TL++GLCR G +  A  L + M+  G+ P+ ITY  +V+G CKMG+ 
Sbjct: 178 CK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDT 233

Query: 470 SMAREFFNEMLR-KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
             A     +M     + P+   Y T I G  K G  S+A+ L  EM  K   PD++TYN 
Sbjct: 234 VSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNC 293

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           +++G C  G   +A +LL++M+     PD +T++++I+A ++ G      +L++ ML + 
Sbjct: 294 MINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRS 353

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
           + P+ VTY+ +I     + RL+ A   F     KG  P++IT+N LI G CR +R+D   
Sbjct: 354 IIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGI 413

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQ 708
            L  +M E G++ N  TYT LI+  C  G+   A  L +EM+   + P+  T + LL   
Sbjct: 414 KLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGL 473

Query: 709 LDKDYKVHAVEYLESL 724
            D      A+E  +++
Sbjct: 474 CDNGKLKDALEMFKAM 489



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 127/281 (45%), Gaps = 40/281 (14%)

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
           +G  ++  L  A + F  M+R    P    +   +   +++G       L ++M     P
Sbjct: 54  SGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMP 113

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
            +  ++ +L+   C    L  A     K+   GF P  +T+ +++H       +    DL
Sbjct: 114 CNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDL 173

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
           F+ M +    P +VT+T L++     GR+  A      M   G++PN ITY  +++G+C+
Sbjct: 174 FHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCK 229

Query: 641 ----------LRRIDQ--------------------------AYGLFIDMEEEGILPNKY 664
                     LR++++                          A+ LFI+M+E+ I P+  
Sbjct: 230 MGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIV 289

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           TY  +IN  C +G W +A +L +EML+R+I PD  T SAL+
Sbjct: 290 TYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALI 330


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  286 bits (732), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 178/613 (29%), Positives = 304/613 (49%), Gaps = 11/613 (1%)

Query: 108 LRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSA--YWVVETVVCVNMHGI------L 159
           ++FF W+  +P  K +   F ++L  L+   +   A    ++    C N   I      L
Sbjct: 134 IQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFL 193

Query: 160 DVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLR 219
           + + G G     S+   + LL+   K  MVE    ++ +ML +G+ P +   N +I +L 
Sbjct: 194 NEISGMGFG--FSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILS 251

Query: 220 DNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGV 279
             G   +A  +   + ++ + P + TY +++   C+   +  A  +   M   GC PN V
Sbjct: 252 KKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSV 311

Query: 280 TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
           TY+ LI G    G +++A  ++ +M++ G++ + ++Y   I          EA+ L   M
Sbjct: 312 TYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARM 371

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
             RG  P + TY  LI GL + G++  A   + +ML++ ++P+ ++YN L+   C  G  
Sbjct: 372 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRF 431

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
             A  +F  +     +    TYN +I GLC  GD+E A  L E M+  G LP V+TY  +
Sbjct: 432 STALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTL 491

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           +NG    GN++ A    + M   G +PD + Y   ++G  K G    A    +EM+  G 
Sbjct: 492 INGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGL 551

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
            P+ ++Y  L+ G  K G ++ A  LL +M   G  P+  +Y ++I+   +         
Sbjct: 552 NPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEK 611

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
           + + M  +GL P ++TYT LI      GR + AF  F +M+ +   PN+ TY++LI GLC
Sbjct: 612 ICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLC 671

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
           +  + D+A  L  +ME +G+ P++ T+T LI+     G    A  L + M+D   +P+Y 
Sbjct: 672 QEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYR 731

Query: 700 THSALLLKQLDKD 712
           T+S +LLK L K+
Sbjct: 732 TYS-VLLKGLQKE 743



 Score =  265 bits (677), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 190/631 (30%), Positives = 301/631 (47%), Gaps = 44/631 (6%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G++     F T++ IL + G +R A  ++  +   ++    DV     L           
Sbjct: 235 GIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSP--DVFTYTSL----------- 281

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
            +L + +   ++    VF++M++ G  P+    + +I  L + G   +A ++   M E G
Sbjct: 282 -ILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKG 340

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           I+P++ TY   + + C     +EA+EL+  M+ RGC PN  TY  LI+G SR G+LE A 
Sbjct: 341 IEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAI 400

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
           GL   MLK GL  +  +YN +I      G    AL +   M   G      TYN +I GL
Sbjct: 401 GLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGL 460

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C  G +  A   F +ML+   +P +++YNTL+ GY   GN+  A  L D ++     P  
Sbjct: 461 CLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDE 520

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
            TYN L+ G  ++G LE A    + M+  G+ P+ ++YT +++G  K G + +A      
Sbjct: 521 WTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLER 580

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M   G  P+  +Y   I G  K    SEA ++ ++M  +G  P++ITY  L+ GLC+ G 
Sbjct: 581 MEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGR 640

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
            + A ++   M     +P+  TY+S+I+   + G       L   M RKGL+P  VT+T 
Sbjct: 641 TQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTS 700

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL---CRLRRIDQAY------- 648
           LI      GR++ AF+    M   G +PN  TY+ L+ GL   C L     A        
Sbjct: 701 LIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYS 760

Query: 649 --------------GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
                          L   M E G  P   TY+ L++  C  G + EA +L K+M +R  
Sbjct: 761 FSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGF 820

Query: 695 EPDYCTHSALLL---KQLDKDYKV---HAVE 719
            PD   + +LL+   K L+ D+ +   H++E
Sbjct: 821 CPDREIYYSLLIAHCKNLEVDHALKIFHSIE 851



 Score =  258 bits (659), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 167/553 (30%), Positives = 272/553 (49%), Gaps = 27/553 (4%)

Query: 198 KMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG 257
           +M + G  P+V+    +I  L   G    A  +Y  M + G+ P+ VTYN +++  C  G
Sbjct: 370 RMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGG 429

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
               AL++   M+G G   N  TYN +I G    G++E+A  L   MLK+G   +  +YN
Sbjct: 430 RFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYN 489

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            +I GY  KG +  A  L + M   G  P   TYN L+ G  KWG++  A   F EM+  
Sbjct: 490 TLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVEC 549

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
            + P+ +SY TL+ G+ + G +  A  L + +      P V +YN +I+GL +      A
Sbjct: 550 GLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEA 609

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
           +++ + M  QG+LP+VITYT +++G C+ G    A + F++M ++   P+ + Y++ I G
Sbjct: 610 EKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYG 669

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
             + G   EA  L +EM  KG  PD +T+  L+ G   LG ++ A  LLR+MV  G  P+
Sbjct: 670 LCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPN 729

Query: 558 HITYTSIIHA--------------------SLEMGDLRRGRDLFNNMLRK----GLSPTL 593
           + TY+ ++                      S    +     ++ +N+L +    G  PTL
Sbjct: 730 YRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTL 789

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
            TY+ L+     +GR   A     +M+ +G  P+   Y +L+   C+   +D A  +F  
Sbjct: 790 DTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHS 849

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL---LLKQLD 710
           +E +G   +   Y  LI   C AG  +EA  L+  ML++E   D    + L   LLK+ +
Sbjct: 850 IEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGE 909

Query: 711 KDYKVHAVEYLES 723
            D  +  +  +ES
Sbjct: 910 LDLCMKLLHIMES 922



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 163/514 (31%), Positives = 262/514 (50%), Gaps = 24/514 (4%)

Query: 193 LLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDS 252
           L +F+ M  +G L + +  N IIK L   G   KA  ++  M + G  P++VTYNT+++ 
Sbjct: 435 LKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLING 494

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
           +  +G +  A  LL  M+  GC P+  TYN L++GFS+ G+LE A    ++M++ GL  +
Sbjct: 495 YLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPN 554

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
             SY  +I G+S+ G +  AL+L E M   G  P + +YN +I GL K  R S+A     
Sbjct: 555 PVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICD 614

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
           +M  + ++P++I+Y TL+ G CR+G    AF +F ++  R  +P + TY++LI GLC+ G
Sbjct: 615 KMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEG 674

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
             + A+ L + M  +G+ PD +T+T +++G   +G +  A      M+  G +P+   Y+
Sbjct: 675 KADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYS 734

Query: 493 TQIAG--------ELKLGDTSEA------------YRLQEEMLAK----GFPPDLITYNV 528
             + G        E K+    EA            + +   +LA+    G  P L TY+ 
Sbjct: 735 VLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYST 794

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           LV GLC+ G   EA +L++ M   GF PD   Y S++ A  +  ++     +F+++  KG
Sbjct: 795 LVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKG 854

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
               L  Y  LI A    G++E A   F  M  K    + I +  L++GL +   +D   
Sbjct: 855 FQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCM 914

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
            L   ME +   PN  TY IL  E    G   E+
Sbjct: 915 KLLHIMESKNFTPNIQTYVILGRELSRIGKSIES 948



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 132/470 (28%), Positives = 214/470 (45%), Gaps = 59/470 (12%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +E+ +++F KML+ G LP V   N +I      G    A  +  +M E G +P   TYN 
Sbjct: 466 IEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNE 525

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++  F K G+++ A     EM   G +PN V+Y  LI G S++G+++ A  L+  M ++G
Sbjct: 526 LVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMG 585

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
              +  SYN +I G S++    EA  + ++M  +G+ P + TY  LI GLC+ GR   A 
Sbjct: 586 CNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAF 645

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT-------- 420
             F +M ++  +P++ +Y++L+YG C+ G   EA +L  E+  + L P  VT        
Sbjct: 646 KIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGF 705

Query: 421 ---------------------------YNTLIDGLCR----------------YG----- 432
                                      Y+ L+ GL +                Y      
Sbjct: 706 VVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHE 765

Query: 433 ---DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
              + E+   L   M   G  P + TY+ +V+G C+ G    A +   +M  +G  PDR 
Sbjct: 766 KDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDRE 825

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
            Y + +    K  +   A ++   + AKGF   L  Y  L+  LCK G +EEA  L   M
Sbjct: 826 IYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNM 885

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           +   +  D I +T ++   L+ G+L     L + M  K  +P + TY +L
Sbjct: 886 LEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVIL 935



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 163/306 (53%)

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
           ++ + NTL+  L ++  +E A+ L + M+N GI P ++T+  ++N   K G +  A    
Sbjct: 204 SLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELIL 263

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           +++ +  L PD F YT+ I G  +  +   A+ + + M+ +G  P+ +TY+ L++GLC  
Sbjct: 264 SQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNE 323

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G ++EA ++L +M+  G  P   TYT  I A   +       +L   M ++G  P + TY
Sbjct: 324 GRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTY 383

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
           T LI   +  G+LE+A   + +M  +G+ PN +TYNALIN LC   R   A  +F  ME 
Sbjct: 384 TALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEG 443

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVH 716
            G L N  TY  +I   C  G+ ++A+ L+++ML     P   T++ L+   L K    +
Sbjct: 444 HGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNN 503

Query: 717 AVEYLE 722
           A   L+
Sbjct: 504 AARLLD 509



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 173/355 (48%), Gaps = 24/355 (6%)

Query: 184 TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
           +K++   +   + +KM   GLLP+V     +I  L  NG +  A +++  M +    P++
Sbjct: 601 SKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNL 660

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
            TY++++   C+EG+  EA  LL EM+ +G +P+ VT+  LI GF   G ++ A  L+R 
Sbjct: 661 YTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRR 720

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVE------------------------ALNLEEEM 339
           M+ +G K +  +Y+ ++ G  ++ LL+E                          NL   M
Sbjct: 721 MVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARM 780

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
              G  PTL TY+ L+ GLC+ GR  +A     +M  +   PD   Y +LL  +C++  +
Sbjct: 781 SEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEV 840

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
             A  +F  + ++     +  Y  LI  LC+ G +E AQ L +NM+ +    D I +T++
Sbjct: 841 DHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVL 900

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
           V+G  K G L +  +  + M  K   P+   Y        ++G + E+  L +++
Sbjct: 901 VDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKL 955



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 69/295 (23%), Positives = 128/295 (43%), Gaps = 31/295 (10%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVV---CVNMHGILDVLIGGGLSSCVSIKI 175
           G+  DE  F ++++  +  G +  A+ ++  +V   C   +    VL+ G    C     
Sbjct: 690 GLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKEC----- 744

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
               LL+  K ++  + +  F+        P  K+ N          F + +  + RM  
Sbjct: 745 ----LLLEEKVAVQHEAVYSFS--------PHEKDVN----------FEIVSNLLARM-S 781

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
           E G +P++ TY+T++   C++G   EA +L+ +M+ RG  P+   Y  L+    +N E++
Sbjct: 782 EIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVD 841

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
            A  +   +   G ++    Y  +IC   + G + EA  L + M+ +        + +L+
Sbjct: 842 HALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLV 901

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
            GL K G +         M  KN  P+I +Y  L     R G   E+  L D+L+
Sbjct: 902 DGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLK 956


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  286 bits (732), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 155/531 (29%), Positives = 283/531 (53%), Gaps = 2/531 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
           +F +M+++  LP +   N+++  + + N F +      RM     I   + +YN +++ F
Sbjct: 67  LFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQN-LRISYDLYSYNILINCF 125

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           C+  ++  AL +L +M   G  P+ VT + L+ G+     + +A  L+  M  +  + + 
Sbjct: 126 CRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNT 185

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
            ++N +I G        EA+ L + MV RG  P L TY  ++ GLCK G +  A     +
Sbjct: 186 VTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKK 245

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M +  +  D++ Y T++   C   N+ +A  LF E+ ++ + P VVTYN+LI  LC YG 
Sbjct: 246 MEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 305

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
              A +L  +MI + I P+V+T++ +++   K G L  A + ++EM+++ + PD F Y++
Sbjct: 306 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 365

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            I G        EA  + E M++K   P+++TYN L+ G CK   +EE  EL R+M   G
Sbjct: 366 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG 425

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
            + + +TY ++I    + GD    + +F  M+  G+ P ++TY++L+      G+LE A 
Sbjct: 426 LVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL 485

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
           + F  +Q   + P++ TYN +I G+C+  +++  + LF  +  +G+ PN   YT +I+  
Sbjct: 486 VVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGF 545

Query: 674 CNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           C  G  +EA  L++EM +    P+  T++ L+  +L    K  + E ++ +
Sbjct: 546 CRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596



 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 142/435 (32%), Positives = 237/435 (54%), Gaps = 4/435 (0%)

Query: 180 LLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGI 239
           L ++ K S   + + + ++M+  G  PD+     ++  L   G    A  + + M +  I
Sbjct: 195 LFLHNKAS---EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKI 251

Query: 240 KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
           +  +V Y T++D+ C    + +AL L  EM  +G  PN VTYN LI      G    A  
Sbjct: 252 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 311

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
           L+ DM++  +  +  +++ +I  + ++G LVEA  L +EM+ R + P + TY+ LI G C
Sbjct: 312 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
              R+ +A+H F  M+ K+  P++++YNTL+ G+C++  + E   LF E+  R LV   V
Sbjct: 372 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
           TYNTLI GL + GD ++AQ++ + M++ G+ PD+ITY+I+++G CK G L  A   F  +
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 491

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
            +  ++PD + Y   I G  K G   + + L   +  KG  P++I Y  ++ G C+ G  
Sbjct: 492 QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 551

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           EEA+ L R+M  DG +P+  TY ++I A L  GD     +L   M   G      T +++
Sbjct: 552 EEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMV 611

Query: 600 IHAHAARGRLELAFM 614
           I+     GRLE +++
Sbjct: 612 INM-LHDGRLEKSYL 625



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 131/448 (29%), Positives = 229/448 (51%)

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
           ++ +A++L  EM      P+ V +N L++  ++  + +    L   M  L +    +SYN
Sbjct: 60  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            +I  +  +  L  AL +  +M+  G  P + T + L+ G C   R+S+A     +M   
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
              P+ +++NTL++G        EA  L D + +R   P + TY T+++GLC+ GD+++A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
             L + M    I  DV+ YT +++  C   N++ A   F EM  KG++P+   Y + I  
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
               G  S+A RL  +M+ +   P+++T++ L+    K G L EA +L  +M+     PD
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
             TY+S+I+       L   + +F  M+ K   P +VTY  LI       R+E     F 
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
           EM  +G+  N +TYN LI GL +    D A  +F  M  +G+ P+  TY+IL++  C  G
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479

Query: 678 NWQEALRLYKEMLDREIEPDYCTHSALL 705
             ++AL +++ +   ++EPD  T++ ++
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMI 507


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  286 bits (732), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 158/505 (31%), Positives = 253/505 (50%), Gaps = 33/505 (6%)

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M E  + P + TYN ++D  CK  +  +A E+L EM  RG +P+ VT+N ++ G  + G+
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
            E+A  L+  M +   + S  +YN +I G  ++  +  A  L +E V+ G  P + TY+I
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           L  GLCK GR+ +A     EM      P++++YNTL+ G C++    +A+ L + L S  
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
            VP VVTY  ++DGLC+ G L+ A ++ E M+ +G  P VITYT ++ G C+ G +  A 
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ---------------------- 511
             F EM+ K    D  AY + + G  K   T EA ++                       
Sbjct: 241 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKE 300

Query: 512 ----------EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
                     E+M  +G  P++ TYN+++ GLCK G ++EA   L  M   G +PD ++Y
Sbjct: 301 GRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSY 360

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
             II    +    +  R + + M++ G+ P  VTY  L+       R + A      M  
Sbjct: 361 NIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIK 420

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG-ILPNKYTYTILINENCNAGNWQ 680
            G+ P+ +TYN LI+GL +  R+  AY L  +M   G ++    TY  +I+  C  G  +
Sbjct: 421 AGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLK 480

Query: 681 EALRLYKEMLDREIEPDYCTHSALL 705
           +AL L   M    +E +  T++  +
Sbjct: 481 QALLLMDHMTGHGVEANTVTYNIFI 505



 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 168/550 (30%), Positives = 273/550 (49%), Gaps = 43/550 (7%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K+  +++   +  +M  NG  P++   N +I  L     + KA E+   +   G  P +V
Sbjct: 127 KRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVV 186

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY  ++D  CKEG + +AL+++  M  RGC+P+ +TY  L+ G  R G +++A  + ++M
Sbjct: 187 TYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEM 246

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           +       A +Y  ++ GY +     EA  + + +  RG  P +  YN L+ G CK GR+
Sbjct: 247 VSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI--RGT-PYIDVYNALMDGYCKEGRL 303

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            +  + F +M  +  +P+I +YN ++ G C+ G + EAF   + + S   VP VV+YN +
Sbjct: 304 DEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNII 363

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           IDGL +    + A+Q+ + MI  GI PD +TY  ++   CK      A      M++ G+
Sbjct: 364 IDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGV 423

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEML----------------------------- 515
            PD   Y T I+G  +     +AY L  EML                             
Sbjct: 424 DPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQAL 483

Query: 516 -------AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
                    G   + +TYN+ +  LCK G L+EA+ LL +M     + D ++YT++I   
Sbjct: 484 LLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGL 540

Query: 569 LEMGDLRRGRDLFNNMLR-KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
            +   L R   L   M+  KGL  T  T+ +LI A     RL+ A      M  +G  P+
Sbjct: 541 CKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPS 600

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYK 687
           VITYN +I  LC+L ++D+A+ LF +M   GI+ +  +YT+LI   C  G  +EAL++ +
Sbjct: 601 VITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLE 660

Query: 688 EMLDREIEPD 697
           EM   + E D
Sbjct: 661 EMASSDCEID 670



 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 159/539 (29%), Positives = 261/539 (48%), Gaps = 36/539 (6%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K S  ++   + ++M+  G+ PD    N I+  L   G   +A  +  +M E   +PS  
Sbjct: 22  KASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCC 81

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TYNT++   CK+  +  A  L+ E    G  P+ VTY++L  G  + G +++A  L+++M
Sbjct: 82  TYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEM 141

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
              G   +  +YN +I G  +     +A  L E +V+ G  P + TY I++ GLCK GR+
Sbjct: 142 SGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRL 201

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL---------- 414
             A      ML++   P +I+Y  L+ G CR+G + EA  +F E+ S++           
Sbjct: 202 DKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSL 261

Query: 415 ----------------------VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
                                  P +  YN L+DG C+ G L+    + E+M  +G +P+
Sbjct: 262 VNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPN 321

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
           + TY I+++G CK G +  A  F   M   G  PD  +Y   I G  K     EA ++ +
Sbjct: 322 IKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLD 381

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           +M+  G PPD +TYN L+   CK    ++A  +L+ M+  G  PD++TY ++I    +  
Sbjct: 382 QMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTN 441

Query: 573 DLRRGRDLFNNMLRKG-LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
            L    +L + MLR G +     TY  +I      G L+ A +    M   G+  N +TY
Sbjct: 442 RLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTY 501

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           N  I+ LC+  R+D+A  L  +M+    L ++ +YT +I   C A     A +L +EM+
Sbjct: 502 NIFIDRLCKEGRLDEASSLLSEMD---TLRDEVSYTTVIIGLCKAEQLDRASKLAREMV 557



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 129/415 (31%), Positives = 193/415 (46%), Gaps = 40/415 (9%)

Query: 173 IKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR 232
           I + + L+  Y K+  +++   VF  M   G +P++K  N ++  L  +G   +A     
Sbjct: 287 IDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLE 346

Query: 233 MMGEFGIKPSIVTYNTMLD-----------------------------------SFCKEG 257
            M   G  P +V+YN ++D                                    FCKE 
Sbjct: 347 SMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEE 406

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA-HSY 316
              +A+ +L  M   G  P+ VTYN LI+G S+   L  A  L+ +ML+ G  VSA  +Y
Sbjct: 407 RFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTY 466

Query: 317 NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
           N II    ++G L +AL L + M   GV     TYNI I  LCK GR+ +A     EM  
Sbjct: 467 NTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM-- 524

Query: 377 KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS-RNLVPTVVTYNTLIDGLCRYGDLE 435
            + + D +SY T++ G C++  +  A  L  E+ + + L  T  T+N LID   +   L+
Sbjct: 525 -DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLD 583

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            A  L E M+ +G  P VITY +++   CK+  +  A E F+EM  +G+     +YT  I
Sbjct: 584 EALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLI 643

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
            G    G   EA ++ EEM +     D +    L   L   G  EEA ELLR+M 
Sbjct: 644 YGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRMT 698


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  286 bits (732), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 179/634 (28%), Positives = 318/634 (50%), Gaps = 55/634 (8%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           A+  F W+ ++ GV    +    +L++LI+S  +                   DV++   
Sbjct: 159 AVDTFAWM-SKMGVSISHYAASEMLDLLIDSDRI-------------------DVILENY 198

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
              C  + + + +   + K+  VE+ L     ++  GL+P + +CN+I+K L        
Sbjct: 199 EEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGV 258

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A + + MM   G  P++VT++T+++ +CKE  + EA  L   M  +G  P+ V Y++LI 
Sbjct: 259 ASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILIN 318

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G  R G+LE+   L    L  G+K+    ++ I+  Y   G L +A+ +   M+  G++P
Sbjct: 319 GLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISP 378

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
            + TY+ILI GLC+ GRV +A   F ++L++ + P +++Y++L+ G+C+S N+ + F L+
Sbjct: 379 NVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLY 438

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG------------------ 448
             +  +  VP VV  + LI+GL R G ++ A +     + +G                  
Sbjct: 439 GIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRL 498

Query: 449 -----------------ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAY 491
                            ++PDV+TYT++V G  + G L  A   F ++L+KG  PD   Y
Sbjct: 499 KRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIY 558

Query: 492 TTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
            T I G  K  D +   ++ + M + G  PD+  YNVL++   + G +E   ELLR+++ 
Sbjct: 559 CTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIK 618

Query: 552 DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLEL 611
            G  PD +TY ++I     +    +   LF  +      P  +T+T+LI A+   GR++ 
Sbjct: 619 YGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDD 678

Query: 612 AFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
           A + FS M  +G  PN++TY+ LI+G  +    + A+ L+  M  + + PN  +Y+ILI+
Sbjct: 679 AMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILID 738

Query: 672 ENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             C  G  +EA   ++  + R + PD   +  L+
Sbjct: 739 GLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILI 772



 Score =  258 bits (659), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 192/707 (27%), Positives = 324/707 (45%), Gaps = 47/707 (6%)

Query: 58  YKELIISTVEEKPWAFCNNRWVSDHFQAVVS-DPELLVRVLNRIREKPRIALRFFRWVET 116
           Y    ++ V +   AF +N +   +  ++ +  P  L  V+ ++R  P  ALRFF W E 
Sbjct: 22  YSSFSVTVVHQIAKAFHHNNFSFFNSGSLPNLQPAHLEPVVFQLRSNPTSALRFFEWAEN 81

Query: 117 QPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVL--IGGGLSSCVS-- 172
             G+      FC I  +L+   +   A  V + +V     G L+VL    G   +  S  
Sbjct: 82  FLGLCHPVQSFCGIAHVLLRHRMFDPATRVFDRMV--GQFGNLEVLGEFHGSFRNYGSNP 139

Query: 173 IKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR 232
             +   LL  Y +  MV++ +  F  M + G+       + ++ +L D+       E Y 
Sbjct: 140 STVYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYE 199

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
            M +      +  Y  + +SF K GE+++ L     +  RG  P  V  N ++ G     
Sbjct: 200 EMCK-----GLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGN 254

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
           ++  A      M++ G   +  +++ +I  Y ++  L EA +L   M+ +G+ P L  Y+
Sbjct: 255 QIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYS 314

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
           ILI GL + G++ +    F   L + V  D++ +++++  Y R G++G+A  ++  +   
Sbjct: 315 ILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKE 374

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
            + P VVTY+ LI+GLCR G +  A  +   ++ QG+ P V+TY+ +++G CK  NL   
Sbjct: 375 GISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDG 434

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP------------ 520
              +  MLRKG  PD    +  I G  + G   EA R   + + +G              
Sbjct: 435 FGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDG 494

Query: 521 -----------------------PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
                                  PD++TY VLV GL + G L+EA  L  +++  GF PD
Sbjct: 495 CFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPD 554

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
           HI Y ++I    +  D   G  +F  M   G+ P +  Y VLI+     G +E       
Sbjct: 555 HIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLR 614

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
           E+   G+ P+++TYN +I G C L+   +A  LF  ++     PN  T+TILI+  C  G
Sbjct: 615 EIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDG 674

Query: 678 NWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
              +A+ ++  ML+R  EP+  T+S L+      +    A E  E +
Sbjct: 675 RMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKM 721



 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 169/628 (26%), Positives = 307/628 (48%), Gaps = 21/628 (3%)

Query: 96  VLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILE------------ILIESGL---L 140
           +L+ + +  RI +    + E   G+   EFVF + L+             L+E GL   +
Sbjct: 181 MLDLLIDSDRIDVILENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKI 240

Query: 141 RSAYWVVETVVCVNMHGI----LDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVF 196
                +++ +   N  G+     D+++  G S   ++     L+ +Y K+  +++   ++
Sbjct: 241 VDCNKILKGLCMGNQIGVASDFFDMMVRSGPSP--NLVTFSTLINVYCKELRLDEAFSLY 298

Query: 197 NKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKE 256
           N M+  G++PD+   + +I  L   G   +   ++ M    G+K  +V +++++D++ + 
Sbjct: 299 NLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRV 358

Query: 257 GEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSY 316
           G++ +A+E+   M   G SPN VTY++LI G  RNG + +A G+   +LK GL+ S  +Y
Sbjct: 359 GDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTY 418

Query: 317 NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
           + +I G+ +   L +   L   M+ +G  P +   ++LI GL + G + +A   FF+ ++
Sbjct: 419 SSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVK 478

Query: 377 KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
           + +  +   +N L+ G  R     +   ++  +    ++P VVTY  L+ GL   G L+ 
Sbjct: 479 RGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDE 538

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
           A  L   ++ +G  PD I Y  +++G CK  + +   + F  M   G+ PD   Y   I 
Sbjct: 539 ALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLIN 598

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
              + G       L  E++  G  PD++TYN ++ G C L    +A +L   +      P
Sbjct: 599 MFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQP 658

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
           + IT+T +I A  + G +     +F++ML +G  P ++TY+ LI  +      E AF  +
Sbjct: 659 NAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELY 718

Query: 617 SEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNA 676
            +M    + PN+++Y+ LI+GLC+   +++A   F       +LP+   Y ILI   C  
Sbjct: 719 EKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKV 778

Query: 677 GNWQEALRLYKEMLDREIEPDYCTHSAL 704
           G   EA+ LY  ML   I PD     AL
Sbjct: 779 GRLAEAMMLYDHMLVNGIMPDDLLQKAL 806


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  286 bits (732), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 155/531 (29%), Positives = 283/531 (53%), Gaps = 2/531 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
           +F +M+++  LP +   N+++  + + N F +      RM     I   + +YN +++ F
Sbjct: 51  LFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQN-LRISYDLYSYNILINCF 109

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           C+  ++  AL +L +M   G  P+ VT + L+ G+     + +A  L+  M  +  + + 
Sbjct: 110 CRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNT 169

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
            ++N +I G        EA+ L + MV RG  P L TY  ++ GLCK G +  A     +
Sbjct: 170 VTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKK 229

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M +  +  D++ Y T++   C   N+ +A  LF E+ ++ + P VVTYN+LI  LC YG 
Sbjct: 230 MEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 289

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
              A +L  +MI + I P+V+T++ +++   K G L  A + ++EM+++ + PD F Y++
Sbjct: 290 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 349

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            I G        EA  + E M++K   P+++TYN L+ G CK   +EE  EL R+M   G
Sbjct: 350 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG 409

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
            + + +TY ++I    + GD    + +F  M+  G+ P ++TY++L+      G+LE A 
Sbjct: 410 LVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL 469

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
           + F  +Q   + P++ TYN +I G+C+  +++  + LF  +  +G+ PN   YT +I+  
Sbjct: 470 VVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGF 529

Query: 674 CNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           C  G  +EA  L++EM +    P+  T++ L+  +L    K  + E ++ +
Sbjct: 530 CRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 580



 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 142/435 (32%), Positives = 237/435 (54%), Gaps = 4/435 (0%)

Query: 180 LLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGI 239
           L ++ K S   + + + ++M+  G  PD+     ++  L   G    A  + + M +  I
Sbjct: 179 LFLHNKAS---EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKI 235

Query: 240 KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
           +  +V Y T++D+ C    + +AL L  EM  +G  PN VTYN LI      G    A  
Sbjct: 236 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 295

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
           L+ DM++  +  +  +++ +I  + ++G LVEA  L +EM+ R + P + TY+ LI G C
Sbjct: 296 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 355

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
              R+ +A+H F  M+ K+  P++++YNTL+ G+C++  + E   LF E+  R LV   V
Sbjct: 356 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 415

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
           TYNTLI GL + GD ++AQ++ + M++ G+ PD+ITY+I+++G CK G L  A   F  +
Sbjct: 416 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 475

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
            +  ++PD + Y   I G  K G   + + L   +  KG  P++I Y  ++ G C+ G  
Sbjct: 476 QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 535

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           EEA+ L R+M  DG +P+  TY ++I A L  GD     +L   M   G      T +++
Sbjct: 536 EEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMV 595

Query: 600 IHAHAARGRLELAFM 614
           I+     GRLE +++
Sbjct: 596 INM-LHDGRLEKSYL 609



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 131/448 (29%), Positives = 229/448 (51%)

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
           ++ +A++L  EM      P+ V +N L++  ++  + +    L   M  L +    +SYN
Sbjct: 44  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            +I  +  +  L  AL +  +M+  G  P + T + L+ G C   R+S+A     +M   
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 163

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
              P+ +++NTL++G        EA  L D + +R   P + TY T+++GLC+ GD+++A
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 223

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
             L + M    I  DV+ YT +++  C   N++ A   F EM  KG++P+   Y + I  
Sbjct: 224 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 283

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
               G  S+A RL  +M+ +   P+++T++ L+    K G L EA +L  +M+     PD
Sbjct: 284 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 343

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
             TY+S+I+       L   + +F  M+ K   P +VTY  LI       R+E     F 
Sbjct: 344 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 403

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
           EM  +G+  N +TYN LI GL +    D A  +F  M  +G+ P+  TY+IL++  C  G
Sbjct: 404 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 463

Query: 678 NWQEALRLYKEMLDREIEPDYCTHSALL 705
             ++AL +++ +   ++EPD  T++ ++
Sbjct: 464 KLEKALVVFEYLQKSKMEPDIYTYNIMI 491


>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score =  286 bits (732), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 179/634 (28%), Positives = 318/634 (50%), Gaps = 55/634 (8%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           A+  F W+ ++ GV    +    +L++LI+S  +                   DV++   
Sbjct: 159 AVDTFAWM-SKMGVSISHYAASEMLDLLIDSDRI-------------------DVILENY 198

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
              C  + + + +   + K+  VE+ L     ++  GL+P + +CN+I+K L        
Sbjct: 199 EEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGV 258

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A + + MM   G  P++VT++T+++ +CKE  + EA  L   M  +G  P+ V Y++LI 
Sbjct: 259 ASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILIN 318

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G  R G+LE+   L    L  G+K+    ++ I+  Y   G L +A+ +   M+  G++P
Sbjct: 319 GLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISP 378

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
            + TY+ILI GLC+ GRV +A   F ++L++ + P +++Y++L+ G+C+S N+ + F L+
Sbjct: 379 NVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLY 438

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG------------------ 448
             +  +  VP VV  + LI+GL R G ++ A +     + +G                  
Sbjct: 439 GIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRL 498

Query: 449 -----------------ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAY 491
                            ++PDV+TYT++V G  + G L  A   F ++L+KG  PD   Y
Sbjct: 499 KRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIY 558

Query: 492 TTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
            T I G  K  D +   ++ + M + G  PD+  YNVL++   + G +E   ELLR+++ 
Sbjct: 559 CTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIK 618

Query: 552 DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLEL 611
            G  PD +TY ++I     +    +   LF  +      P  +T+T+LI A+   GR++ 
Sbjct: 619 YGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDD 678

Query: 612 AFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
           A + FS M  +G  PN++TY+ LI+G  +    + A+ L+  M  + + PN  +Y+ILI+
Sbjct: 679 AMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILID 738

Query: 672 ENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             C  G  +EA   ++  + R + PD   +  L+
Sbjct: 739 GLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILI 772



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 192/707 (27%), Positives = 324/707 (45%), Gaps = 47/707 (6%)

Query: 58  YKELIISTVEEKPWAFCNNRWVSDHFQAVVS-DPELLVRVLNRIREKPRIALRFFRWVET 116
           Y    ++ V +   AF +N +   +  ++ +  P  L  V+ ++R  P  ALRFF W E 
Sbjct: 22  YSSFSVTVVHQIAKAFHHNNFSFFNSGSLPNLQPAHLEPVVFQLRSNPTSALRFFEWAEN 81

Query: 117 QPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVL--IGGGLSSCVS-- 172
             G+      FC I  +L+   +   A  V + +V     G L+VL    G   +  S  
Sbjct: 82  FLGLCHPVQSFCGIAHVLLRHRMFDPATRVFDRMV--GQFGNLEVLGEFHGSFRNYGSNP 139

Query: 173 IKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR 232
             +   LL  Y +  MV++ +  F  M + G+       + ++ +L D+       E Y 
Sbjct: 140 STVYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYE 199

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
            M +      +  Y  + +SF K GE+++ L     +  RG  P  V  N ++ G     
Sbjct: 200 EMCK-----GLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGN 254

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
           ++  A      M++ G   +  +++ +I  Y ++  L EA +L   M+ +G+ P L  Y+
Sbjct: 255 QIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYS 314

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
           ILI GL + G++ +    F   L + V  D++ +++++  Y R G++G+A  ++  +   
Sbjct: 315 ILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKE 374

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
            + P VVTY+ LI+GLCR G +  A  +   ++ QG+ P V+TY+ +++G CK  NL   
Sbjct: 375 GISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDG 434

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP------------ 520
              +  MLRKG  PD    +  I G  + G   EA R   + + +G              
Sbjct: 435 FGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDG 494

Query: 521 -----------------------PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
                                  PD++TY VLV GL + G L+EA  L  +++  GF PD
Sbjct: 495 CFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPD 554

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
           HI Y ++I    +  D   G  +F  M   G+ P +  Y VLI+     G +E       
Sbjct: 555 HIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLR 614

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
           E+   G+ P+++TYN +I G C L+   +A  LF  ++     PN  T+TILI+  C  G
Sbjct: 615 EIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDG 674

Query: 678 NWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
              +A+ ++  ML+R  EP+  T+S L+      +    A E  E +
Sbjct: 675 RMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKM 721



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 169/628 (26%), Positives = 307/628 (48%), Gaps = 21/628 (3%)

Query: 96  VLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILE------------ILIESGLLR-- 141
           +L+ + +  RI +    + E   G+   EFVF + L+             L+E GL+   
Sbjct: 181 MLDLLIDSDRIDVILENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKI 240

Query: 142 -SAYWVVETVVCVNMHGI----LDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVF 196
                +++ +   N  G+     D+++  G S   ++     L+ +Y K+  +++   ++
Sbjct: 241 VDCNKILKGLCMGNQIGVASDFFDMMVRSGPSP--NLVTFSTLINVYCKELRLDEAFSLY 298

Query: 197 NKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKE 256
           N M+  G++PD+   + +I  L   G   +   ++ M    G+K  +V +++++D++ + 
Sbjct: 299 NLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRV 358

Query: 257 GEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSY 316
           G++ +A+E+   M   G SPN VTY++LI G  RNG + +A G+   +LK GL+ S  +Y
Sbjct: 359 GDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTY 418

Query: 317 NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
           + +I G+ +   L +   L   M+ +G  P +   ++LI GL + G + +A   FF+ ++
Sbjct: 419 SSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVK 478

Query: 377 KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
           + +  +   +N L+ G  R     +   ++  +    ++P VVTY  L+ GL   G L+ 
Sbjct: 479 RGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDE 538

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
           A  L   ++ +G  PD I Y  +++G CK  + +   + F  M   G+ PD   Y   I 
Sbjct: 539 ALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLIN 598

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
              + G       L  E++  G  PD++TYN ++ G C L    +A +L   +      P
Sbjct: 599 MFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQP 658

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
           + IT+T +I A  + G +     +F++ML +G  P ++TY+ LI  +      E AF  +
Sbjct: 659 NAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELY 718

Query: 617 SEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNA 676
            +M    + PN+++Y+ LI+GLC+   +++A   F       +LP+   Y ILI   C  
Sbjct: 719 EKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKV 778

Query: 677 GNWQEALRLYKEMLDREIEPDYCTHSAL 704
           G   EA+ LY  ML   I PD     AL
Sbjct: 779 GRLAEAMMLYDHMLVNGIMPDDLLQKAL 806


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  286 bits (732), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 183/621 (29%), Positives = 308/621 (49%), Gaps = 10/621 (1%)

Query: 105 RIALRFFRWVETQPG--VKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVL 162
           R+AL+F +WV  QPG  +K    ++C    IL+++ +  SA  ++  +      GI    
Sbjct: 91  RLALKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLC---QMGIGSKS 147

Query: 163 IGGGLSS----CVSI-KILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
           I G L      C SI  + DLL+ +Y K+ M++  +  F  +   G  P V  CN I+  
Sbjct: 148 IFGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILAS 207

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
           +  +  +     ++R M + GI P++ T+N +++  C EG +++A  LL +M+  G  P 
Sbjct: 208 MVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPT 267

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
            VTYN L+  + + G  + A  LI  M+  G++    +YN  I          +A  L +
Sbjct: 268 IVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLK 327

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
           +M    ++P   TYN LI G  K G++  A   F EM + ++ P+ ++YN L+ G+C  G
Sbjct: 328 KMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVG 387

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
           +  EA  L D + +  L    VTY TL++GLC++   E+A++L E M    ++   I YT
Sbjct: 388 DFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYT 447

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
           ++++G CK G L  A +    M + G+ PD   Y++ I G  ++G+   A  +   M   
Sbjct: 448 VLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRS 507

Query: 518 GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
           G   + I Y+ L++  C+ G++ EA ++   M  +G   DH T   ++ +    G L   
Sbjct: 508 GLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEA 567

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
                +M R GL P  +TY  +I+ + + G    AF +F +M   G  P+  TY +L+ G
Sbjct: 568 EKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKG 627

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           LC+   + +A      +       +   Y  L+ E C +GN  EA+ L+ +M+   + PD
Sbjct: 628 LCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPD 687

Query: 698 YCTHSALLLKQLDKDYKVHAV 718
             T+S+LL     K   V AV
Sbjct: 688 SYTYSSLLTGLCRKGKAVTAV 708



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 153/627 (24%), Positives = 267/627 (42%), Gaps = 106/627 (16%)

Query: 185  KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
            K  M+++ + +   M ++G+ PDV   + +I      G    A+E+   M   G+  + +
Sbjct: 455  KNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKI 514

Query: 245  TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
             Y+T++ +FC+ G + EA+++   M   G   +  T NVL++   R+G+L +A   +  M
Sbjct: 515  IYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHM 574

Query: 305  LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
             ++GL  ++ +Y+ II GY   G  + A +  ++M+  G  P+  TY  L+ GLCK G +
Sbjct: 575  SRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNL 634

Query: 365  SDARH-----------------------------------RFFEMLRKNVIPDIISYNTL 389
             +A+                                     F +M++ NV+PD  +Y++L
Sbjct: 635  VEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSL 694

Query: 390  LYGYCRSGNIGEAFLLFDELRSR-NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
            L G CR G    A  LF     R  L P  V Y  L+DGL + G  + A    E M+ +G
Sbjct: 695  LTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKG 754

Query: 449  ILPDVITYTIMVNGSCKMGNLSMAREFFNEM----------------------------- 479
              PD + +  +++   + G +  A +FF+ M                             
Sbjct: 755  TCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYL 814

Query: 480  ------LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
                  +R+G+ PD+  + + I G  K G      +L  +M+ +G   D  T+N+L++  
Sbjct: 815  SLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKY 874

Query: 534  CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
             + G + +A +L+  M   G  PD  TY  I +   +    R    + + ML  G+ P  
Sbjct: 875  SESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKH 934

Query: 594  VTYTVLIHAHAARGRLELAFMYFSEMQVKG------------------------------ 623
              Y  LI+     G ++ AF    EM+  G                              
Sbjct: 935  AQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDH 994

Query: 624  -----IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGN 678
                 + P + T+  L++  CR  +I +A  L   ME  G+  +   Y +LI   C  G+
Sbjct: 995  MLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGD 1054

Query: 679  WQEALRLYKEMLDREIEPDYCTHSALL 705
               A  LY+EM  R++ P+  T++ L+
Sbjct: 1055 SAAAFELYEEMRHRDLCPNITTYAVLV 1081



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 134/498 (26%), Positives = 231/498 (46%), Gaps = 1/498 (0%)

Query: 196  FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
            F+ M++ G  P       ++K L   G  V+A++    +         V YNT+L   CK
Sbjct: 606  FDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCK 665

Query: 256  EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
             G + EA+ L  +M      P+  TY+ L+TG  R G+   A  L    +  G     H 
Sbjct: 666  SGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHV 725

Query: 316  -YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
             Y  ++ G S+ G    A    EEM+ +G  P    +N +I    + G++  A   F  M
Sbjct: 726  MYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTM 785

Query: 375  LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
                V P++ +YN LL+G+ +   +     L+  +    + P  +T+++LI GL + G  
Sbjct: 786  RWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIP 845

Query: 435  EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
            ++  +L   MI +G L D  T+ I++N   + G +  A +  N M   G+ PDR  Y   
Sbjct: 846  DLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHI 905

Query: 495  IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
              G  K     E+  +  EML  G  P    Y  L++G+C++G ++ A +L  +M   GF
Sbjct: 906  FNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGF 965

Query: 555  IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
                +  ++++   L  G       + ++MLR  L PT+ T+T L+H      ++  A  
Sbjct: 966  GSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALK 1025

Query: 615  YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
                M++ G++ +V+ YN LI G+C       A+ L+ +M    + PN  TY +L++   
Sbjct: 1026 LKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAIS 1085

Query: 675  NAGNWQEALRLYKEMLDR 692
             A N  +  +L  ++ +R
Sbjct: 1086 AANNLIQGEKLLTDLQER 1103



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 124/436 (28%), Positives = 205/436 (47%), Gaps = 1/436 (0%)

Query: 226  KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGC-SPNGVTYNVL 284
            +A  ++  M +  + P   TY+++L   C++G+   A+ L     GRG   PN V Y  L
Sbjct: 671  EAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCL 730

Query: 285  ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
            + G S+ G  + A     +M+K G      ++N II   S +G +++A +    M   GV
Sbjct: 731  VDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGV 790

Query: 345  APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
             P LATYNIL++G  K   +      +  M+R+ + PD +++++L+ G  +SG       
Sbjct: 791  CPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVK 850

Query: 405  LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
            L  ++     +    T+N LI+     G +  A  L   M   G+ PD  TY  + NG  
Sbjct: 851  LLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLN 910

Query: 465  KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
            K      +    +EML  G+ P    Y T I G  ++GD   A++L++EM A GF    +
Sbjct: 911  KKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEV 970

Query: 525  TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM 584
              + +V GL   G  E+A  +L  M+    +P   T+T+++H       +     L   M
Sbjct: 971  AESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVM 1030

Query: 585  LRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRI 644
               GL   +V Y VLI    A G    AF  + EM+ + + PN+ TY  L++ +     +
Sbjct: 1031 ELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNL 1090

Query: 645  DQAYGLFIDMEEEGIL 660
             Q   L  D++E G++
Sbjct: 1091 IQGEKLLTDLQERGLI 1106



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 175/360 (48%)

Query: 196  FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
            F +M++ G  PD    N II      G  +KA + +  M  +G+ P++ TYN +L  F K
Sbjct: 747  FEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSK 806

Query: 256  EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
            +  +   L L   M   G  P+ +T++ LI G S++G  +    L+  M+  G      +
Sbjct: 807  KQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFT 866

Query: 316  YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
            +N +I  YSE G + +A +L   M T GV P   TYN +  GL K     ++     EML
Sbjct: 867  FNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEML 926

Query: 376  RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
               VIP    Y TL+ G CR G+I  AF L DE+ +       V  + ++ GL   G  E
Sbjct: 927  ENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTE 986

Query: 436  VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
             A  + ++M+   +LP + T+T +++  C+   ++ A +    M   GL+ D  AY   I
Sbjct: 987  DAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLI 1046

Query: 496  AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
             G    GD++ A+ L EEM  +   P++ TY VLV  +    +L +  +LL  +   G I
Sbjct: 1047 MGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGLI 1106



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 200/449 (44%), Gaps = 36/449 (8%)

Query: 177  DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMG 235
            + LL    K   + + + +F+KM++N +LPD    + ++  L   G +V A  ++   MG
Sbjct: 657  NTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMG 716

Query: 236  EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
               + P+ V Y  ++D   K G  + A     EM  +G  P+ V +N +I   SR G++ 
Sbjct: 717  RGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMM 776

Query: 296  QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
            +A      M   G+  +  +YN ++ G+S+K  L+  L+L   M+  G+ P   T++ LI
Sbjct: 777  KANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLI 836

Query: 356  YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
             GL K G          +M+ +  + D  ++N L+  Y  SG + +AF L + + +  + 
Sbjct: 837  LGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVF 896

Query: 416  PTVVTYN-----------------------------------TLIDGLCRYGDLEVAQQL 440
            P   TYN                                   TLI+G+CR GD++ A +L
Sbjct: 897  PDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKL 956

Query: 441  KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
            K+ M   G     +  + MV G    G    A    + MLR  L P    +TT +    +
Sbjct: 957  KDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCR 1016

Query: 501  LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
                +EA +L+  M   G   D++ YNVL+ G+C  G    A EL  +M      P+  T
Sbjct: 1017 DAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITT 1076

Query: 561  YTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
            Y  ++ A     +L +G  L  ++  +GL
Sbjct: 1077 YAVLVDAISAANNLIQGEKLLTDLQERGL 1105



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 113/240 (47%)

Query: 176  LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
             ++L+  Y++   + +   + N M   G+ PD    N I   L       ++  V   M 
Sbjct: 867  FNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEML 926

Query: 236  EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
            E G+ P    Y T+++  C+ G++Q A +L  EM+  G   + V  + ++ G    G+ E
Sbjct: 927  ENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTE 986

Query: 296  QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
             A  ++  ML++ L  +  ++  ++  +     + EAL L+  M   G+   +  YN+LI
Sbjct: 987  DAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLI 1046

Query: 356  YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
             G+C  G  + A   + EM  +++ P+I +Y  L+     + N+ +   L  +L+ R L+
Sbjct: 1047 MGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGLI 1106


>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
 gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
          Length = 742

 Score =  286 bits (731), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 182/582 (31%), Positives = 295/582 (50%), Gaps = 28/582 (4%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           SI + ++LL   TK+  V+    +   M+ +G+ P+    N +I +L D+G    ARE++
Sbjct: 20  SIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARELF 79

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M E G +P+  ++  ++  +C+ G   + LELL EM+  G SPN V YN LI+ F + 
Sbjct: 80  DKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKE 139

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV----APT 347
           G+ + A  L+ +M K GL     ++N  I      G ++EA  +  +M    V     P 
Sbjct: 140 GKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPN 199

Query: 348 LATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFD 407
           + TYN+++ G CK G + +AR  F +M     + +  SYN  L G  R G + EA L+  
Sbjct: 200 IITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLK 259

Query: 408 ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG 467
           E+    + P V +YN ++DGLC+ G L  A+ L   M + G+LPD +TYT +++G C  G
Sbjct: 260 EMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTG 319

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
            +S A     EM+R G  P+ +     +    K G  SEA  L ++M  KG+  D +T N
Sbjct: 320 KVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCN 379

Query: 528 VLVHGLCKLGSLEEANELLRKM----------VGDGFI-------------PDHITYTSI 564
           +++ GLC  G L++A E++  M          +G+ +I             PD I+Y++I
Sbjct: 380 IVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTI 439

Query: 565 IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
           I    + G +   +  F  M+ K L P    Y V IH+    G++  AF    +M+ KG 
Sbjct: 440 ISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGC 499

Query: 625 RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
              + TYN+LI GL    +I + YGL  +M E G+ P+   Y  +++  C  G  ++A  
Sbjct: 500 NKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPS 559

Query: 685 LYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
           +  EML + I P+  + S +L+K   K     AV+ +  + L
Sbjct: 560 VLDEMLQKGISPNISSFS-ILIKAFCKACDFSAVDEIFEIAL 600



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 166/582 (28%), Positives = 283/582 (48%), Gaps = 61/582 (10%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           + + L+  + K+   +    + ++M ++GL PDV   N  I  L  +G  ++A  ++R M
Sbjct: 128 VYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDM 187

Query: 235 G---EFGI-KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
                 G+ +P+I+TYN ML  FCKEG ++EA  L  +M+      N  +YN+ + G  R
Sbjct: 188 QIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVR 247

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
            G+L +A+ ++++M+ +G++ + +SYN ++ G  + G+L +A  L   M + GV P   T
Sbjct: 248 IGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVT 307

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           Y  L++G C  G+VS+A +   EM+R    P+  + N LLY   + G I EA  L  ++ 
Sbjct: 308 YTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMN 367

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG---------------------- 448
            +  V   VT N +IDGLC  G L+ A ++   M   G                      
Sbjct: 368 EKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRK 427

Query: 449 -ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
             +PD+I+Y+ +++G CK G +  A++ F EM+ K LQPD   Y   I    K G  S A
Sbjct: 428 KCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSA 487

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
           +R+ ++M  KG    L TYN L+ GL     + E   L+ +M   G  PD   Y +++ +
Sbjct: 488 FRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSS 547

Query: 568 SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA-------HAARGRLELAF------- 613
             E G ++    + + ML+KG+SP + ++++LI A        A     E+A        
Sbjct: 548 LCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKE 607

Query: 614 ----MYFSEMQVKG----------------IRPNVITYNALINGLCRLRRIDQAYGLFID 653
               + F+E+ V G                       Y  LI+ LC+  ++D A G+   
Sbjct: 608 ALYSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHK 667

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIE 695
           + ++G   +  ++  +I+     GN  EA  L ++M++   E
Sbjct: 668 LIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEKMMEMASE 709



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 144/493 (29%), Positives = 238/493 (48%), Gaps = 27/493 (5%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PSI  YN +L S  KEG +     L  +M   G SP   T+NVLI     +G L+ AR L
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
              M + G + + +S+  ++ GY   G   + L L  EM   G +P    YN LI   CK
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV----P 416
            G+  DA     EM +  + PD++++N  +   C SG + EA  +F +++   ++    P
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQP 198

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
            ++TYN ++ G C+ G LE A+ L E M     L +  +Y I + G  ++G L  A+   
Sbjct: 199 NIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVL 258

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
            EM+  G++P+ ++Y   + G  K G   +A  L   M + G  PD +TY  L+HG C  
Sbjct: 259 KEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHT 318

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G + EAN +LR+M+ DG  P++ T   ++++  + G +    +L   M  KG     VT 
Sbjct: 319 GKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTC 378

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKG-----------------------IRPNVITYNA 633
            ++I      G+L+ A    + M   G                         P++I+Y+ 
Sbjct: 379 NIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYST 438

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
           +I+GLC+  R+ +A   FI+M  + + P+   Y + I+  C  G    A R+ K+M  + 
Sbjct: 439 IISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKG 498

Query: 694 IEPDYCTHSALLL 706
                 T+++L++
Sbjct: 499 CNKTLQTYNSLIM 511



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 108/348 (31%), Positives = 171/348 (49%), Gaps = 11/348 (3%)

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           P I  YN LL    + G +     L  ++ +  + P   T+N LI  LC  G L+ A++L
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
            + M  +G  P+  ++ I+V G C+ G  S   E   EM R G  P++  Y T I+   K
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI----P 556
            G T +A +L +EM   G  PD++T+N  +  LC  G + EA+ + R M  D  +    P
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQP 198

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV---TYTVLIHAHAARGRLELAF 613
           + ITY  ++    + G L   R LF  M    +S  L+   +Y + +      G+L  A 
Sbjct: 199 NIITYNLMLGGFCKEGMLEEARALFEKM---KVSENLMNRESYNIWLLGLVRIGKLLEAQ 255

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
           +   EM   G+ PNV +YN +++GLC+   +  A  L   M   G+LP+  TYT L++  
Sbjct: 256 LVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGY 315

Query: 674 CNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYL 721
           C+ G   EA  + +EM+     P+  T + +LL  L K+ ++   E L
Sbjct: 316 CHTGKVSEANNVLREMMRDGCSPNNYTCN-ILLYSLWKEGRISEAEEL 362


>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  285 bits (730), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 165/536 (30%), Positives = 274/536 (51%), Gaps = 9/536 (1%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           VFN ++     P + + N ++  +           +Y+ M   G+ P  +T N +++ +C
Sbjct: 79  VFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYC 138

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
              ++   L +L EM  RG SPN VT+  L+ G      + +A GL+R M+++G + +  
Sbjct: 139 NLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVV 198

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRG------VAPTLATYNILIYGLCKWGRVSDAR 368
           +Y  ++ G    G  + A+ L EEM+         + P L  Y  +I  LCK G +   +
Sbjct: 199 TYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGK 258

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F EM  + + PD+++Y+++++G C +G    A  LF+E+    + P VVT+N LID L
Sbjct: 259 ELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDAL 318

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G +E A  L + MI +G  PD  TY  +++G C  G +  AR+ F  M  KG++ D 
Sbjct: 319 CKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDA 378

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
            +Y   I G  K G   EA +L  EM+ K   P +ITYN L+ GL + G + +A  L  +
Sbjct: 379 VSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGE 438

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M      P+  TY  ++    +   L    +LF+ +      P++  +  LI       +
Sbjct: 439 MKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARK 498

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           +E+A   F+ +  +G+ PNVITY  +I+GLC+  +++ A  LF+ MEE+G  PN  T+  
Sbjct: 499 IEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNT 558

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           L+   C     Q+ + L +EM +++  PD  T S +++  L KD K    EYL  L
Sbjct: 559 LMRGFCQNDEMQKVVELLQEMAEKDFSPDASTIS-IVVDLLSKDEKYR--EYLHLL 611



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 144/420 (34%), Positives = 227/420 (54%), Gaps = 6/420 (1%)

Query: 187 SMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM----GEFG--IK 240
           S + +   +  KM+R G  P+V     ++  L   G ++ A +++  M    G FG  IK
Sbjct: 176 SRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIK 235

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P++V Y T++DS CK+G + +  EL  EM+GRG SP+ V Y+ +I G    G  E A+GL
Sbjct: 236 PNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGL 295

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
             +M+  G+  +  ++N +I    + G + EA +L + M+ RG +P   TYN LI G C 
Sbjct: 296 FNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCL 355

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            GR+ DAR  F  M  K +  D +SYN L+ GYC+SG + EA  L+ E+  + ++PTV+T
Sbjct: 356 EGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVIT 415

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YNTL+ GL R G +  A  L   M    + P+  TY I+++G CK  +LS A E F+ + 
Sbjct: 416 YNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLE 475

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
               QP    +   I G  K      A  L   +  +G  P++ITY V++HGLCK G LE
Sbjct: 476 NHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLE 535

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
            A +L   M   G  P+ +T+ +++    +  ++++  +L   M  K  SP   T ++++
Sbjct: 536 NAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVV 595



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 128/351 (36%), Positives = 204/351 (58%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K  ++++   +F +M   G+ PDV   + II  +   G    A+ ++  M + G+ P++V
Sbjct: 250 KDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVV 309

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           T+N ++D+ CK G+M+EA  LL  M  RG SP+  TYN LI GF   G ++ AR L   M
Sbjct: 310 TFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSM 369

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
              G++  A SYN +I GY + G +VEA  L  EM+ + + PT+ TYN L+ GL + G+V
Sbjct: 370 ESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKV 429

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            DA + F EM   ++ P+  +YN LL G C++ ++ EA  LF  L + +  P++  +N L
Sbjct: 430 RDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCL 489

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           IDGLC+   +E+A++L   + ++G+ P+VITYT+M++G CK G L  A++ F  M  KG 
Sbjct: 490 IDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGC 549

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
            P+   + T + G  +  +  +   L +EM  K F PD  T +++V  L K
Sbjct: 550 APNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSK 600



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/400 (32%), Positives = 197/400 (49%), Gaps = 19/400 (4%)

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV--SDARHRF 371
           H + PI  G          ++L ++ V+   AP        +   CK G +  S+A   F
Sbjct: 32  HPHRPISPG---------PISLTKDTVSN--APDRGQLENFLKSNCKSGHIKRSEAFSVF 80

Query: 372 FEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY 431
             ++     P I S+NTLL    +     +   L+  +    L P  +T N LI+  C  
Sbjct: 81  NHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNL 140

Query: 432 GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAY 491
             ++    +   M+ +G  P+ +T+T +V G C    +S A     +M+R G +P+   Y
Sbjct: 141 NKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTY 200

Query: 492 TTQIAGELKLGDTSEAYRLQEEML--AKGF----PPDLITYNVLVHGLCKLGSLEEANEL 545
            T + G    G+T  A +L EEML    GF     P+L+ Y  ++  LCK G +++  EL
Sbjct: 201 GTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKEL 260

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
             +M G G  PD + Y+SIIH     G     + LFN M+ +G+ P +VT+ VLI A   
Sbjct: 261 FLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCK 320

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
            G++E A      M  +G  P+  TYN LI+G C   RID A  LF+ ME +GI  +  +
Sbjct: 321 AGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVS 380

Query: 666 YTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           Y +LIN  C +G   EA +LY+EM+ +EI P   T++ LL
Sbjct: 381 YNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLL 420



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 122/407 (29%), Positives = 190/407 (46%), Gaps = 41/407 (10%)

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
           EA ++   ++     P ++++N L+  + K  R  D    +  M    + PD I+ N L+
Sbjct: 75  EAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILI 134

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
             YC    +     +  E+  R   P  VT+ +L+ GLC    +  A  L   M+  G  
Sbjct: 135 NCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYR 194

Query: 451 PDVITYTIMVNGSCKMGNLSMA-------------------------------------- 472
           P+V+TY  ++NG C  GN  +A                                      
Sbjct: 195 PNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLI 254

Query: 473 ---REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
              +E F EM  +G+ PD  AY++ I G    G    A  L  EM+ +G  P+++T+NVL
Sbjct: 255 DKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVL 314

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           +  LCK G +EEAN LL+ M+  G  PD  TY ++I      G +   RDLF +M  KG+
Sbjct: 315 IDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGI 374

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
               V+Y VLI+ +   GR+  A   + EM  K I P VITYN L+ GL R  ++  A+ 
Sbjct: 375 ETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWN 434

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
           LF +M+   + P   TY IL++  C   +  EA+ L+  + + + +P
Sbjct: 435 LFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQP 481


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  285 bits (730), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 172/582 (29%), Positives = 290/582 (49%), Gaps = 58/582 (9%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +++ L   ++++  G   +  +   +I  L   G +     + R +    +KP +V YNT
Sbjct: 149 IKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNT 208

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++ S CK   + +A +L  EM  +G SPN VTYN L+ GF   G L++A  L+ +M    
Sbjct: 209 IIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKN 268

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           +     ++N +I    ++G +  A  +   M+   + P + TYN LI G     +V +A+
Sbjct: 269 INPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAK 328

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
           + F+ M +  V P++ +Y T++ G C+   + EA  LF+E++ +N++P +VTY +LIDGL
Sbjct: 329 YVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGL 388

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+   LE A  L + M  QGI PDV +YTI+++  CK G L  A+EFF  +L KG   + 
Sbjct: 389 CKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNV 448

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             Y   I G  K     EA  L+ +M  KG  PD IT+  ++  L +    ++A ++LR+
Sbjct: 449 QTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILRE 508

Query: 549 MVGDGF-----------------------IPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           M+  G                         PD +TY +++     + +L+  + +F +M 
Sbjct: 509 MIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMA 568

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
           + G++P +  YT++I     +  ++ A   F EM+ K + PN++TY +LI+ LC+   ++
Sbjct: 569 QMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLE 628

Query: 646 QAYGLFIDMEEEGILPNKYTYTIL-----------------------------------I 670
           +A  L  +M+E GI P+ Y+YTIL                                   I
Sbjct: 629 RAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMI 688

Query: 671 NENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
           NE C AG + EAL L  +M D+   PD  T   ++    +KD
Sbjct: 689 NELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKD 730



 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 168/553 (30%), Positives = 281/553 (50%), Gaps = 23/553 (4%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
           L++L+  +   + +     V   +L+ G  P+    N +IK L   G   KA   +  + 
Sbjct: 101 LNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVV 160

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
             G + + V+Y T+++  CK GE +    LL +++G    P+ V YN +I    +N  L 
Sbjct: 161 AQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLG 220

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
            A  L  +M+  G+  +  +YN ++ G+   G L EA +L  EM  + + P + T+N LI
Sbjct: 221 DACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLI 280

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
             L K G++  A+     M++  + PD+++YN+L+ GY     +  A  +F  +    + 
Sbjct: 281 DALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVT 340

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P V TY T+IDGLC+   ++ A  L E M  + ++PD++TYT +++G CK  +L  A   
Sbjct: 341 PNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIAL 400

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
             +M  +G+QPD ++YT  +    K G    A    + +L KG+  ++ TYNV+++GLCK
Sbjct: 401 CKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCK 460

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS----- 590
                EA +L  KM G G +PD IT+ +II A  E  +  +   +   M+ +GL      
Sbjct: 461 ADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKV 520

Query: 591 ------------------PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
                             P +VTY  L+  +     L+ A   F  M   G+ PNV  Y 
Sbjct: 521 RLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYT 580

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
            +I+GLC+ + +D+A  LF +M+ + + PN  TYT LI+  C   + + A+ L KEM + 
Sbjct: 581 IMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEH 640

Query: 693 EIEPDYCTHSALL 705
            I+PD  +++ LL
Sbjct: 641 GIQPDVYSYTILL 653



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 163/545 (29%), Positives = 261/545 (47%), Gaps = 58/545 (10%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           PDV   N II  L  N     A ++Y  M   GI P++VTYN ++  FC  G ++EA  L
Sbjct: 201 PDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSL 260

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           L EM+ +  +P+  T+N LI    + G+++ A+ ++  M+K  +K    +YN +I GY  
Sbjct: 261 LNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFF 320

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
              +  A  +   M   GV P + TY  +I GLCK   V +A   F EM  KN+IPDI++
Sbjct: 321 LNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVT 380

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           Y +L+ G C++ ++  A  L  +++ + + P V +Y  L+D LC+ G LE A++  + ++
Sbjct: 381 YTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLL 440

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
            +G   +V TY +M+NG CK      A +  ++M  KG  PD   + T I    +  +  
Sbjct: 441 VKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDEND 500

Query: 506 EAYRLQEEMLAKGF-----------------------PPDLITY---------------- 526
           +A ++  EM+A+G                         PD++TY                
Sbjct: 501 KAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHA 560

Query: 527 -------------------NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
                               +++ GLCK  +++EA  L  +M      P+ +TYTS+I A
Sbjct: 561 KYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDA 620

Query: 568 SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
             +   L R   L   M   G+ P + +YT+L+      GRLE A   F  + VKG   N
Sbjct: 621 LCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLN 680

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYK 687
           V  Y A+IN LC+    D+A  L   ME++G +P+  T+ I+I          +A ++  
Sbjct: 681 VQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILX 740

Query: 688 EMLDR 692
           EM+ R
Sbjct: 741 EMIAR 745



 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 163/568 (28%), Positives = 264/568 (46%), Gaps = 58/568 (10%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
           F++ML     P   + N I+  L +N        +++     G  P + T N +++ FC 
Sbjct: 51  FDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCH 110

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
              +  A  +L  +  RG  PN +T N LI G    GE+++A      ++  G +++  S
Sbjct: 111 LTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVS 170

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           Y  +I G  + G       L  ++    V P +  YN +I+ LCK   + DA   + EM+
Sbjct: 171 YRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMI 230

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
            K + P++++YN L+YG+C  G++ EAF L +E++ +N+ P V T+NTLID L + G ++
Sbjct: 231 VKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMK 290

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            A+ +   M+   I PDV+TY  +++G   +  +  A+  F  M + G+ P+   YTT I
Sbjct: 291 AAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMI 350

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
            G  K     EA  L EEM  K   PD++TY  L+ GLCK   LE A  L +KM   G  
Sbjct: 351 DGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQ 410

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           PD  +YT ++ A  + G L   ++ F  +L KG    + TY V+I+          A   
Sbjct: 411 PDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDL 470

Query: 616 FSEMQVKGIRPNVITYNALINGL-----------------------CRLRRIDQA----- 647
            S+M+ KG  P+ IT+  +I  L                        R  R+ +A     
Sbjct: 471 KSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLA 530

Query: 648 -------------YGLFID-----------------MEEEGILPNKYTYTILINENCNAG 677
                        YG  +D                 M + G+ PN   YTI+I+  C   
Sbjct: 531 VMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKK 590

Query: 678 NWQEALRLYKEMLDREIEPDYCTHSALL 705
              EA+ L++EM  + + P+  T+++L+
Sbjct: 591 TVDEAMSLFEEMKHKNMFPNIVTYTSLI 618



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 161/617 (26%), Positives = 285/617 (46%), Gaps = 39/617 (6%)

Query: 67  EEKPWAFCNNRWVSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFV 126
           E K   + +++ V+  FQ        L+  L +  E   +A R  R +E    VK D  +
Sbjct: 148 EIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVA-RLLRKLEGH-SVKPDVVM 205

Query: 127 FCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKK 186
           + TI+  L ++ LL  A        C     +   +I  G+S   ++   + L+  +   
Sbjct: 206 YNTIIHSLCKNKLLGDA--------C----DLYSEMIVKGISP--NVVTYNALVYGFCIM 251

Query: 187 SMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTY 246
             +++   + N+M    + PDV   N +I  L   G    A+ V  +M +  IKP +VTY
Sbjct: 252 GHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTY 311

Query: 247 NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
           N+++D +    +++ A  + + M   G +PN  TY  +I G  +   +++A  L  +M  
Sbjct: 312 NSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKY 371

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
             +     +Y  +I G  +   L  A+ L ++M  +G+ P + +Y IL+  LCK GR+ +
Sbjct: 372 KNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLEN 431

Query: 367 ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
           A+  F  +L K    ++ +YN ++ G C++   GEA  L  ++  +  +P  +T+ T+I 
Sbjct: 432 AKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIIC 491

Query: 427 GLCRYGDLEVAQQLKENMINQG-----------------------ILPDVITYTIMVNGS 463
            L    + + A+++   MI +G                       I PDV+TY  +++G 
Sbjct: 492 ALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGY 551

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
             +  L  A+  F  M + G+ P+   YT  I G  K     EA  L EEM  K   P++
Sbjct: 552 FLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNI 611

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
           +TY  L+  LCK   LE A  LL++M   G  PD  +YT ++    + G L   +++F  
Sbjct: 612 VTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQR 671

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           +L KG    +  YT +I+     G  + A     +M+ KG  P+ +T++ +I  L     
Sbjct: 672 LLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDE 731

Query: 644 IDQAYGLFIDMEEEGIL 660
            D+A  +  +M   G++
Sbjct: 732 NDKAEKILXEMIARGLM 748



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 119/396 (30%), Positives = 195/396 (49%), Gaps = 23/396 (5%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K+ MV++ + +F +M    ++PD+     +I  L  N    +A  + + M E GI+P + 
Sbjct: 355 KEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVY 414

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           +Y  +LD+ CK G ++ A E    +  +G   N  TYNV+I G  +     +A  L   M
Sbjct: 415 SYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKM 474

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG--------------------- 343
              G    A ++  IIC   EK    +A  +  EM+ RG                     
Sbjct: 475 EGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTK 534

Query: 344 --VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
             + P + TY  L+ G      +  A++ F+ M +  V P++  Y  ++ G C+   + E
Sbjct: 535 ACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDE 594

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           A  LF+E++ +N+ P +VTY +LID LC+   LE A  L + M   GI PDV +YTI+++
Sbjct: 595 AMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLD 654

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
           G CK G L  A+E F  +L KG   +   YT  I    K G   EA  LQ +M  KG  P
Sbjct: 655 GLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMP 714

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
           D +T+++++  L +    ++A ++L +M+  G + +
Sbjct: 715 DAVTFDIIIWALFEKDENDKAEKILXEMIARGLMKE 750



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 133/472 (28%), Positives = 207/472 (43%), Gaps = 35/472 (7%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P    +N +L S          + L  + +  G +P+  T N+L+  F     +  A  +
Sbjct: 61  PPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSV 120

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           + ++LK                                   RG  P   T N LI GLC 
Sbjct: 121 LANILK-----------------------------------RGYHPNAITLNTLIKGLCF 145

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G +  A +   +++ +    + +SY TL+ G C++G       L  +L   ++ P VV 
Sbjct: 146 RGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVM 205

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YNT+I  LC+   L  A  L   MI +GI P+V+TY  +V G C MG+L  A    NEM 
Sbjct: 206 YNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMK 265

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            K + PD   + T I    K G    A  +   M+     PD++TYN L+ G   L  ++
Sbjct: 266 LKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVK 325

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
            A  +   M   G  P+  TYT++I    +   +     LF  M  K + P +VTYT LI
Sbjct: 326 NAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLI 385

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                   LE A     +M+ +GI+P+V +Y  L++ LC+  R++ A   F  +  +G  
Sbjct: 386 DGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYH 445

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
            N  TY ++IN  C A  + EA+ L  +M  +   PD  T   ++    +KD
Sbjct: 446 LNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKD 497


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  285 bits (730), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 197/701 (28%), Positives = 318/701 (45%), Gaps = 93/701 (13%)

Query: 95  RVLNRIREK--PRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVET--- 149
           R+LN++ +   P +A   +  +    GV  DEF    + +     G +  A   VE    
Sbjct: 188 RLLNKLVQSGDPGMAAMVYGQMRIA-GVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEG 246

Query: 150 ----VVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLL 205
               V  V  H ++D   G G +                     E    +   + R GL 
Sbjct: 247 MGLEVNLVAYHAVMDCYCGMGWT---------------------EDARRILESLQRKGLS 285

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG-IKPSIVTYNTMLDSFCKEGEMQEALE 264
           P+V     ++K    +G   +A  V + M E G I    V Y  M++ +C+ G M +A  
Sbjct: 286 PNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATR 345

Query: 265 LLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYS 324
           +  EM+  G   N   YN +I G  + G +E+ + ++++M  +G++   +SYN +I GY 
Sbjct: 346 VRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYC 405

Query: 325 EKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDII 384
            +G + +A  +   MV  G+A T  TYN L+ G C    + DA   +F ML++ V P+ I
Sbjct: 406 REGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEI 465

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
           S +TLL G  ++G   +A  L+ E  +R L   V+T+NT+I+GLC+ G +  A++L + M
Sbjct: 466 SCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRM 525

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
                 PD +TY  + +G CK+G L  A    N+M   G  P    + + I G       
Sbjct: 526 KELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQW 585

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL------------------------- 539
            +   +  EM A+G  P+L+TY  L+ G CK G+L                         
Sbjct: 586 HKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSAL 645

Query: 540 ----------EEANELLRKMVGDGFIPD--------------------------HITYTS 563
                     +EAN +L+K+V    IP                           ++ +  
Sbjct: 646 MSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNV 705

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           II    + G +   + LF ++  K   P   TY+ LIH  AA G ++ AF     M   G
Sbjct: 706 IIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAG 765

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
           + PN+ITYN+LI GLC+  ++ +A  LF  ++ +GI PN  TY  LI+E C  G   EA 
Sbjct: 766 LTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAF 825

Query: 684 RLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           +L ++M++  I+P   T+S L+     + Y   A++ L+ +
Sbjct: 826 KLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQM 866



 Score =  281 bits (719), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 168/549 (30%), Positives = 281/549 (51%), Gaps = 26/549 (4%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y ++  ++    V N+M   G+  ++   N +I  L   G   + ++V + M + G++P 
Sbjct: 334 YCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPD 393

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             +YNT++D +C+EG M++A E+   M   G +   +TYN L+ GF     ++ A  L  
Sbjct: 394 KYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWF 453

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            MLK G+  +  S + ++ G  + G   +ALNL +E + RG+A  + T+N +I GLCK G
Sbjct: 454 LMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIG 513

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R+++A      M      PD ++Y TL  GYC+ G +G A  L +++      P+V  +N
Sbjct: 514 RMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFN 573

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           + I G            +   M  +G+ P+++TY  ++ G CK GNL  A   + EM+  
Sbjct: 574 SFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNN 633

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM-------------------------LAK 517
           G+ P+ F  +  ++   K G   EA  + +++                         +A 
Sbjct: 634 GMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIAD 693

Query: 518 GFPPDL-ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
           G P    + +NV++ GLCK G + +A  L   +    F+PD+ TY+S+IH     G +  
Sbjct: 694 GNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDE 753

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
              L + ML  GL+P ++TY  LI+     G+L  A   F+++Q KGI PN ITYN LI+
Sbjct: 754 AFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLID 813

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
             C+  +  +A+ L   M EEGI P   TY+ILI   C  G  +EA++L  +M++  ++P
Sbjct: 814 EYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDP 873

Query: 697 DYCTHSALL 705
           +Y T+  L+
Sbjct: 874 NYITYCTLI 882



 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 189/678 (27%), Positives = 307/678 (45%), Gaps = 67/678 (9%)

Query: 90  PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVET 149
           P LL   L R+R  P  AL  FR   ++P +         +L IL  +     A  ++ +
Sbjct: 70  PALLQAALRRVRLDPDAALHLFRLAPSRPSL----VSHAQLLHILARARRFHDARALLSS 125

Query: 150 VVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVK 209
           +   +   +   L         S    DLLL  +     +   L VF+ M + G  P ++
Sbjct: 126 LP-PHAEPLFPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLR 184

Query: 210 NCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM 269
           +CNR++  L  +G    A  VY  M   G+ P   T   M  ++C++G + +A+E + EM
Sbjct: 185 SCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEM 244

Query: 270 QG-----------------------------------RGCSPNGVTYNVLITGFSRNGEL 294
           +G                                   +G SPN VTY +L+ G+ ++G +
Sbjct: 245 EGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRM 304

Query: 295 EQARGLIRDMLKLG-LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           E+A  ++++M + G + V   +Y  +I GY ++G + +A  +  EM   G+   L  YN 
Sbjct: 305 EEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNT 364

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           +I GLCK GR+ + +    EM    + PD  SYNTL+ GYCR G++ +AF +   +    
Sbjct: 365 MINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNG 424

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           L  T +TYNTL+ G C    ++ A +L   M+ +G+ P+ I+ + +++G  K G    A 
Sbjct: 425 LAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQAL 484

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
             + E L +GL  +   + T I G  K+G  +EA  L + M     PPD +TY  L  G 
Sbjct: 485 NLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGY 544

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
           CKLG L  A  L+ KM   GF P    + S I          +  D+ + M  +GLSP L
Sbjct: 545 CKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNL 604

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
           VTY  LI      G L  A   + EM   G+ PNV   +AL++   +  ++D+A  +   
Sbjct: 605 VTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQK 664

Query: 654 MEEEGILPNKYTYTILINEN--------------------------CNAGNWQEALRLYK 687
           +    ++P     TI I++                           C +G   +A  L++
Sbjct: 665 LVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFE 724

Query: 688 EMLDREIEPDYCTHSALL 705
            + ++   PD  T+S+L+
Sbjct: 725 SLRNKRFLPDNFTYSSLI 742



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 149/564 (26%), Positives = 277/564 (49%), Gaps = 34/564 (6%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G++ D++ + T+++     G +R A+ +              +++  GL++  +    + 
Sbjct: 389 GMRPDKYSYNTLIDGYCREGSMRKAFEMCR------------MMVRNGLAA--TTLTYNT 434

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL  +     ++  L ++  ML+ G+ P+  +C+ ++  L   G + +A  +++     G
Sbjct: 435 LLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARG 494

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           +  +++T+NT+++  CK G M EA ELL  M+   C P+ +TY  L  G+ + G+L  A 
Sbjct: 495 LAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTAT 554

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L+  M  LG   S   +N  I G+       +  ++  EM  RG++P L TY  LI G 
Sbjct: 555 HLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGW 614

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           CK G + +A + +FEM+   + P++   + L+  + + G + EA L+  +L + +++P  
Sbjct: 615 CKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGC 674

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
                 ID +           + + + +       + + +++ G CK G ++ A+  F  
Sbjct: 675 SISTIEIDKI---------SHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFES 725

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           +  K   PD F Y++ I G    G   EA+ L++ ML+ G  P++ITYN L++GLCK G 
Sbjct: 726 LRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGK 785

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           L  A  L  K+   G  P+ ITY ++I    + G       L   M+ +G+ PT++TY++
Sbjct: 786 LSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSI 845

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           LI+    +G +E A     +M    + PN ITY  LI+G  +   +++   L+ +M   G
Sbjct: 846 LIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRG 905

Query: 659 ILPNKYTYTILINENCNAGNWQEA 682
           +LP  +            GNW+ +
Sbjct: 906 LLPTNWI-----------GNWKRS 918



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 26/206 (12%)

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           P L+++  L+H L +     +A  LL  +      P H                     L
Sbjct: 98  PSLVSHAQLLHILARARRFHDARALLSSL------PPH------------------AEPL 133

Query: 581 FNNM--LRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           F ++  + +  + + V++ +L+ AHA  G+L  A   F  M   G RP++ + N L+N L
Sbjct: 134 FPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKL 193

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
            +      A  ++  M   G+LP+++T  I+    C  G   +A+   +EM    +E + 
Sbjct: 194 VQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNL 253

Query: 699 CTHSALLLKQLDKDYKVHAVEYLESL 724
             + A++       +   A   LESL
Sbjct: 254 VAYHAVMDCYCGMGWTEDARRILESL 279


>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
          Length = 1003

 Score =  285 bits (730), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 168/551 (30%), Positives = 273/551 (49%), Gaps = 34/551 (6%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +E  L + + M+R G +P   NC+ +I  LR      +A  +   +G+ G+ P++  YN 
Sbjct: 284 LEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNA 343

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++D  CK     +A  L  EM GRG  PN VTY +LI    + G +E A  L   M   G
Sbjct: 344 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 403

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           +KV+ + YN +I GY ++G L  A  L   MV  G+ PT A+Y+ LI GLC+ G +S   
Sbjct: 404 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCM 463

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               EM  + +  +  ++  L+ G+C+   + EA  LFD++   N++P  VT+N +I+G 
Sbjct: 464 ELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY 523

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C  G++  A QL + M+  G+ PD  TY  +++G C    +S A EF  ++       + 
Sbjct: 524 CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNN 583

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
           F+ T  + G  + G  +E Y L +EM  +G   DL+++ ++V+   K    E++  L R+
Sbjct: 584 FSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFRE 643

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M   G  PD I YT +I A  +  ++ +  + ++ M+  G SP  VT+TVLI+     G 
Sbjct: 644 MKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGY 703

Query: 609 LELAFMYFSEMQVKGIRPNVITYNA----------------------------------L 634
           L  A +   EM    + PN  TYN                                   L
Sbjct: 704 LGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNIL 763

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           I GLC+  +I +A  L   + E G  P+  +Y+ +I+E C  G+  +A  L+ EML + +
Sbjct: 764 IKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGL 823

Query: 695 EPDYCTHSALL 705
           +PD   ++  +
Sbjct: 824 KPDVVAYNIFI 834



 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 148/539 (27%), Positives = 274/539 (50%), Gaps = 16/539 (2%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           A R F+ +  + G++ +E  +  ++  L + G+       +E  +C     + D +   G
Sbjct: 357 ADRLFKEMAGR-GLEPNEVTYAILIHALCKRGM-------IEDALC-----LFDKMRDKG 403

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
           +   V++   + L+  Y K+  +++   + + M++ GL P   + + +I  L  NG    
Sbjct: 404 IK--VTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSS 461

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
             E++R M E GI  +  T+  +++ FCK+ +M EA  L  +M      PN VT+NV+I 
Sbjct: 462 CMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIE 521

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G+   G + +A  L   M+++GLK   ++Y  +I G      + +A     ++       
Sbjct: 522 GYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVL 581

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
              +   L+YG  + GR ++  H + EM  + V  D++S+  ++Y   +  +  ++ +LF
Sbjct: 582 NNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLF 641

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
            E++ + + P  + Y  +ID L +  ++  A    + M+  G  P+ +T+T+++N  CK 
Sbjct: 642 REMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKS 701

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G L  A     EML   + P++F Y   +      GD  +A  L   ML +G    ++++
Sbjct: 702 GYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSF 760

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           N+L+ GLCK G ++EA +L+ K+   GF PD I+Y++IIH   +MGD+ +  +L+N ML 
Sbjct: 761 NILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLY 820

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
           KGL P +V Y + I      G  + A   ++ M   G++PN  TY AL++G+  +   D
Sbjct: 821 KGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMLHYD 879



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 133/514 (25%), Positives = 244/514 (47%), Gaps = 35/514 (6%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           AR+++  M + G+      Y   + ++C+   +  A  L+  M+  G   + V YNVL+ 
Sbjct: 182 ARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMY 241

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G  +N  +++A  +   M+ +G+     +Y  ++ G+     L  AL +  +M+  G  P
Sbjct: 242 GLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVP 301

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
           + A  + +I  L K   V +A     ++    ++P++ +YN L+   C++    +A  LF
Sbjct: 302 SEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLF 361

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
            E+  R L P  VTY  LI  LC+ G +E A  L + M ++GI   V  Y  ++NG CK 
Sbjct: 362 KEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQ 421

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G+L  AR   + M+++GL P   +Y+  IAG  + GD S    L  EM  +G   +  T+
Sbjct: 422 GSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTF 481

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
             L++G CK   ++EA  L  KM+    IP+ +T+  +I     +G++R+   L++ M+ 
Sbjct: 482 TALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVE 541

Query: 587 KGLSPTLVTY-----------------------------------TVLIHAHAARGRLEL 611
            GL P   TY                                   T L++     GR   
Sbjct: 542 MGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTE 601

Query: 612 AFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
            +  + EM V+G++ +++++  ++    +    +++  LF +M+E+G+ P+   YT +I+
Sbjct: 602 TYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMID 661

Query: 672 ENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
                 N  +AL  + +M+     P+  TH+ L+
Sbjct: 662 ALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLI 695



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 35/226 (15%)

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
           L+ G   +  T + ++  L K+     A +L  KM+  G   D   YT+ I A  E  +L
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
              R L   M  +G+  + V Y VL++      R++ A    + M   G+  + +TY  L
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 635 INGLCRLRR-----------------------------------IDQAYGLFIDMEEEGI 659
           + G CR+                                     +++A+ L   + + G+
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 660 LPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +PN + Y  LI++ C    + +A RL+KEM  R +EP+  T++ L+
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILI 380


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  285 bits (730), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 167/538 (31%), Positives = 285/538 (52%), Gaps = 3/538 (0%)

Query: 171 VSIKILDLLLLIYTKKSMVEQCL-LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE 229
           V I I + LL  + +    ++ L ++ ++    G +PDV + + ++K L D G S +A +
Sbjct: 148 VDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADD 207

Query: 230 VYRMMGEFG--IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITG 287
           + RMM E G    P +V Y T++D F KEG++ +A +L  EM  RG  P+ VTY+ ++  
Sbjct: 208 LLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHA 267

Query: 288 FSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPT 347
             +   + +A   +R M+  G+     +YN +I GYS  G   EA+ + +EM    + P 
Sbjct: 268 LCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 327

Query: 348 LATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFD 407
           + T N+L+  LCK+G++ +AR  F  M  K   PD+ SY  +L GY   G + +   LFD
Sbjct: 328 VVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFD 387

Query: 408 ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG 467
            +    + P + T++ LI      G L+ A  +   M + G+ PDV+TYT ++   C++G
Sbjct: 388 LMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIG 447

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
            +  A E FN+M+ +G+ PD++AY   I G    G   +A  L  E++  G   D++ ++
Sbjct: 448 KMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFS 507

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
            +++ LCKLG + +A  +    V  G  PD + Y+ ++     +G + +   +F+ M+  
Sbjct: 508 SIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 567

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
           G+ P +V Y  L++ +   GR++     F EM  KGI+P+ I YN +I+GL    R   A
Sbjct: 568 GIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPA 627

Query: 648 YGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
              F +M E GI  NK TY I++        + EA+ L+KE+    ++ D  T + ++
Sbjct: 628 KVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMI 685



 Score =  268 bits (686), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 159/506 (31%), Positives = 261/506 (51%), Gaps = 38/506 (7%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR-GCSPNGVTYNVLITGFSRNGELEQ 296
           G++  I+  N +L  FC+     EAL++L       GC P+  +Y++L+      G+  Q
Sbjct: 145 GLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQ 204

Query: 297 ARGLIRDMLKLGLKVSAH--SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           A  L+R M + G   S    +Y  +I  + ++G + +A +L +EMV RG+ P L TY+ +
Sbjct: 205 ADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSV 264

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           ++ LCK   +  A     +M+ K V+PD  +YN L+YGY  +G   EA  +F E+R  ++
Sbjct: 265 VHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI 324

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG----SC------ 464
           +P VVT N L+  LC+YG ++ A+ + + M  +G  PDV +Y IM+NG     C      
Sbjct: 325 LPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTD 384

Query: 465 -------------------------KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
                                      G L  A   FNEM   G++PD   YTT IA   
Sbjct: 385 LFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALC 444

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           ++G   +A     +M+ +G  PD   Y+ L+ G C  GSL +A EL+ +++ +G   D +
Sbjct: 445 RIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIV 504

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
            ++SII+   ++G +   +++F+  +  G  P  V Y++L+  +   G++E A   F  M
Sbjct: 505 FFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAM 564

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
              GI PNV+ Y  L+NG C++ RID+   LF +M ++GI P+   Y I+I+    AG  
Sbjct: 565 VSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRT 624

Query: 680 QEALRLYKEMLDREIEPDYCTHSALL 705
             A   + EM +  I  + CT++ +L
Sbjct: 625 VPAKVKFHEMTESGIAINKCTYNIVL 650



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/417 (29%), Positives = 210/417 (50%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  Y+     ++ + VF +M R+ +LPDV   N ++  L   G   +AR+V+  M   G
Sbjct: 299 LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKG 358

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
             P + +Y  ML+ +  +G + +  +L   M G G +P+  T++VLI  ++  G L++A 
Sbjct: 359 QNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAM 418

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            +  +M   G+K    +Y  +I      G + +A+    +M+ +GVAP    Y+ LI G 
Sbjct: 419 IIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGF 478

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C  G +  A+    E++   +  DI+ +++++   C+ G I +A  +FD   +    P  
Sbjct: 479 CTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDA 538

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           V Y+ L+DG C  G +E A ++ + M++ GI P+V+ Y  +VNG CK+G +      F E
Sbjct: 539 VVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFRE 598

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           ML+KG++P    Y   I G    G T  A     EM   G   +  TYN+++ G  K   
Sbjct: 599 MLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRC 658

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
            +EA  L +++       D IT  ++I    +   +   +DLF ++ R GL P +VT
Sbjct: 659 FDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 715



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 127/405 (31%), Positives = 200/405 (49%), Gaps = 44/405 (10%)

Query: 342 RGVAPTLATYNI-----------------------------------LIYGLCKWGRVSD 366
           R ++PT  TY I                                   L+ G C+  R  +
Sbjct: 109 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDE 168

Query: 367 A----RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV--PTVVT 420
           A     HR  E+     +PD+ SY+ LL   C  G  G+A  L   +     V  P VV 
Sbjct: 169 ALDILLHRTPEL---GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVA 225

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y T+ID   + GD+  A  L + M+ +GI PD++TY+ +V+  CK   +  A  F  +M+
Sbjct: 226 YTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMV 285

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            KG+ PD + Y   I G    G   EA R+ +EM      PD++T N+L+  LCK G ++
Sbjct: 286 NKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIK 345

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA ++   M   G  PD  +Y  +++     G L    DLF+ ML  G++P + T++VLI
Sbjct: 346 EARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLI 405

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
            A+A  G L+ A + F+EM+  G++P+V+TY  +I  LCR+ ++D A   F  M ++G+ 
Sbjct: 406 KAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVA 465

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           P+KY Y  LI   C  G+  +A  L  E+++  +  D    S+++
Sbjct: 466 PDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSII 510


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  285 bits (729), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 170/550 (30%), Positives = 283/550 (51%), Gaps = 39/550 (7%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K+  +E+ L +  +++  G+ P++   N +I  L       +A  ++  MG+ G++P+ V
Sbjct: 344 KRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDV 403

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY+ ++D FC+ G++  AL  L EM   G   +   YN LI G  + G++  A G + +M
Sbjct: 404 TYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEM 463

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           +   L+ +  +Y  ++ GY  KG + +AL L  EM  +G+AP++ T+  L+ GL + G +
Sbjct: 464 INKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLI 523

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            DA   F EM   NV P+ ++YN ++ GYC  G++ +AF    E+  + +VP   +Y  L
Sbjct: 524 RDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPL 583

Query: 425 IDGL-----------------------------------CRYGDLEVAQQLKENMINQGI 449
           I GL                                   CR G LE A  + + M+ +G+
Sbjct: 584 IHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
             D++ Y ++++GS K  +  +      EM  +GL+PD   YT+ I  + K GD  EA+ 
Sbjct: 644 DLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFG 703

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           + + M+ +G  P+ +TY  +++GLCK G + EA  L  KM     +P+ +TY   +   L
Sbjct: 704 IWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDI-L 762

Query: 570 EMG--DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
             G  D+++  +L N +L KGL     TY +LI     +GR+E A    + M   G+ P+
Sbjct: 763 TKGEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPD 821

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYK 687
            ITY  +IN LCR   + +A  L+  M E+GI P++  Y  LI+  C AG   +A  L  
Sbjct: 822 CITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRN 881

Query: 688 EMLDREIEPD 697
           EML + + P+
Sbjct: 882 EMLRQGLIPN 891



 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 192/726 (26%), Positives = 340/726 (46%), Gaps = 63/726 (8%)

Query: 36  TYPSISESNNKDSVLNPES--ESYYKELIISTVEEKPWAFCNNRWV-SDHFQAVVSDPEL 92
           T  SI+ S+ ++S  N  S  +S  +E  I+  E+K +     R V       +    EL
Sbjct: 6   TIRSITSSHFRNSFRNVSSVIDSAQEECRIA--EDKQFVDAVKRIVRGKRSWEIALSSEL 63

Query: 93  LVRVLNRIR---------EKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLL--R 141
           + R L  +          + P++ LRFF ++    G       FC ++  L+++ L    
Sbjct: 64  VSRRLKTVHVEEILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPA 123

Query: 142 SAYWVVETVVCVNMHGILDVLIGGGLSSC------VSIKILDLLLLIYTKKSMVEQCLLV 195
           S+      +  +    + +VL      SC       S    DLL+  Y +   V   +LV
Sbjct: 124 SSLLQTLLLRALKPSDVFNVLF-----SCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLV 178

Query: 196 FNKML-RNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           F  M+ +  LLP+V+  + ++  L        A E++  M   GI+P +  Y  ++ S C
Sbjct: 179 FKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLC 238

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           +  ++  A E++  M+  GC  N V YNVLI G  +  ++ +A G+ +D+    LK    
Sbjct: 239 ELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVV 298

Query: 315 SY--------------------NPIIC---------------GYSEKGLLVEALNLEEEM 339
           +Y                    + ++C               G  ++G + EALNL + +
Sbjct: 299 TYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRV 358

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
           V  GV+P L  YN LI  LCK  +  +A   F  M +  + P+ ++Y+ L+  +CR G +
Sbjct: 359 VDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKL 418

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
             A     E+    L  +V  YN+LI+G C++GD+  A+     MIN+ + P V+TYT +
Sbjct: 419 DTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSL 478

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           + G C  G ++ A   ++EM  KG+ P  + +TT ++G  + G   +A +L  EM     
Sbjct: 479 MGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNV 538

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
            P+ +TYNV++ G C+ G + +A E L++M   G +PD  +Y  +IH     G     + 
Sbjct: 539 KPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKV 598

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
             + + +       + YT L+H     G+LE A     EM  +G+  +++ Y  LI+G  
Sbjct: 599 FVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSL 658

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
           + +     +GL  +M + G+ P+   YT +I+     G+++EA  ++  M++    P+  
Sbjct: 659 KHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV 718

Query: 700 THSALL 705
           T++A++
Sbjct: 719 TYTAVI 724



 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 175/591 (29%), Positives = 287/591 (48%), Gaps = 37/591 (6%)

Query: 171 VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKN-CNRIIKVLRDNGFSVKARE 229
           V+I   ++L+    KK  V + + +   +    L PDV   C  +  + +   F +    
Sbjct: 260 VNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEM 319

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           +  M+      PS    +++++   K G+++EAL L+  +   G SPN   YN LI    
Sbjct: 320 MDEMLC-LRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLC 378

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           +  +  +A  L   M K+GL+ +  +Y+ +I  +  +G L  AL+   EMV  G+  ++ 
Sbjct: 379 KGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVY 438

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
            YN LI G CK+G +S A     EM+ K + P +++Y +L+ GYC  G I +A  L+ E+
Sbjct: 439 PYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEM 498

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
             + + P++ T+ TL+ GL R G +  A +L   M    + P+ +TY +M+ G C+ G++
Sbjct: 499 TGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDM 558

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
           S A EF  EM  KG+ PD ++Y   I G    G  SEA    + +       + I Y  L
Sbjct: 559 SKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGL 618

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           +HG C+ G LEEA  + ++MV  G   D + Y  +I  SL+  D +    L   M  +GL
Sbjct: 619 LHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGL 678

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA-- 647
            P  V YT +I A +  G  + AF  +  M  +G  PN +TY A+INGLC+   +++A  
Sbjct: 679 KPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEV 738

Query: 648 ----------------YGLF--------IDMEE---------EGILPNKYTYTILINENC 674
                           YG F        +DM++         +G+L N  TY +LI   C
Sbjct: 739 LCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFC 798

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
             G  +EA  L   M+   + PD  T++ ++ +   ++    A+E   S+T
Sbjct: 799 RQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMT 849



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 203/418 (48%), Gaps = 45/418 (10%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y  K  + + L ++++M   G+ P +     ++  L   G    A +++  M E+ +KP+
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPN 541

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            VTYN M++ +C+EG+M +A E L EM  +G  P+  +Y  LI G    G+  +A+  + 
Sbjct: 542 RVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVD 601

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            + K   +++   Y  ++ G+  +G L EAL++ +EMV RGV   L  Y +LI G  K  
Sbjct: 602 GLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLK-- 659

Query: 363 RVSDARHRFF----EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
                R  FF    EM  + + PD + Y +++    ++G+  EAF ++D + +   VP  
Sbjct: 660 --HKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNE 717

Query: 419 VTYNTLIDGLCRYG------------------------------------DLEVAQQLKE 442
           VTY  +I+GLC+ G                                    D++ A +L  
Sbjct: 718 VTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVEL-H 776

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
           N I +G+L +  TY +++ G C+ G +  A E    M+  G+ PD   YTT I    +  
Sbjct: 777 NAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRN 836

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
           D  +A  L   M  KG  PD + YN L+HG C  G + +A EL  +M+  G IP++ T
Sbjct: 837 DVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 195/388 (50%), Gaps = 1/388 (0%)

Query: 339 MVTR-GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
           M+T+  + P + T + L++GL K+     A   F +M+   + PD+  Y  ++   C   
Sbjct: 182 MITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELK 241

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
           ++  A  +   + +      +V YN LIDGLC+   +  A  +K+++  + + PDV+TY 
Sbjct: 242 DLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYC 301

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
            +V G CK+    +  E  +EML     P   A ++ + G  K G   EA  L + ++  
Sbjct: 302 TLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDF 361

Query: 518 GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
           G  P+L  YN L+  LCK     EA  L  +M   G  P+ +TY+ +I      G L   
Sbjct: 362 GVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTA 421

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
                 M+  GL  ++  Y  LI+ H   G +  A  + +EM  K + P V+TY +L+ G
Sbjct: 422 LSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGG 481

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
            C   +I++A  L+ +M  +GI P+ YT+T L++    AG  ++A++L+ EM +  ++P+
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPN 541

Query: 698 YCTHSALLLKQLDKDYKVHAVEYLESLT 725
             T++ ++    ++     A E+L+ +T
Sbjct: 542 RVTYNVMIEGYCEEGDMSKAFEFLKEMT 569



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 129/284 (45%), Gaps = 43/284 (15%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY----RMM 234
           LL  + ++  +E+ L V  +M++ G+  D+        VL D     K R+++    + M
Sbjct: 618 LLHGFCREGKLEEALSVCQEMVQRGVDLDLV----CYGVLIDGSLKHKDRKLFFGLLKEM 673

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
            + G+KP  V Y +M+D+  K G+ +EA  +   M   GC PN VTY  +I G  + G +
Sbjct: 674 HDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFV 733

Query: 295 EQARGLIRDMLKL-----------------------------------GLKVSAHSYNPI 319
            +A  L   M  +                                   GL  +  +YN +
Sbjct: 734 NEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNML 793

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           I G+  +G + EA  L   M+  GV+P   TY  +I  LC+   V  A   +  M  K +
Sbjct: 794 IRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGI 853

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
            PD ++YNTL++G C +G +G+A  L +E+  + L+P   T  T
Sbjct: 854 RPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  285 bits (729), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 161/504 (31%), Positives = 261/504 (51%), Gaps = 5/504 (0%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P  K+ + ++++L        A  V+  M   G+ P++ T+  ++ + C   E+  A  L
Sbjct: 181 PTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSL 240

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           L +M   GC PN + Y  LI   S+  ++ +A  L+ +M  +G      ++N +I G  +
Sbjct: 241 LRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCK 300

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
              + +A  L + M+ RG  P   TY  L++GLC+ G++++AR    ++L K   P+   
Sbjct: 301 VNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEAR----KILIKIPCPNNAI 356

Query: 386 YNTLLYGYCRSGNIGEAFLLFDE-LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
            NTL+ GY  SG + EA    +E + +    P + TYN L+ GLC+ G L  A+ L   M
Sbjct: 357 LNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEM 416

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
             +G  P+VITY I+VNG CK G L  A    +EM  +GL  +   Y   I    +    
Sbjct: 417 SRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKV 476

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
             A  L  EM  KG  PDL TYN L++GLCK+  ++EA  L   M+ DG + +++TY ++
Sbjct: 477 HVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTL 536

Query: 565 IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
           IHA L  G  ++   L N+ML +G +   +TY  LI A    G +E     + +M + G+
Sbjct: 537 IHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGL 596

Query: 625 RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
             + I+ N +INGLC++ ++D A+    D    G +P+  TY  ++N  C  G  +EAL 
Sbjct: 597 GADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALN 656

Query: 685 LYKEMLDREIEPDYCTHSALLLKQ 708
           L+  +    + PD  T++  +  Q
Sbjct: 657 LFDRLQVEGVRPDAFTYNTFISWQ 680



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 153/483 (31%), Positives = 249/483 (51%), Gaps = 5/483 (1%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V+    +   M ++G +P+      +I  L       +A ++   M   G  P + T+N 
Sbjct: 234 VDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFND 293

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++   CK  ++ +A +L+  M  RG  P+ +TY  L+ G  R G+L +AR +   ++K+ 
Sbjct: 294 VIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKI---LIKIP 350

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALN-LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
              +A   N +I GY   G L EA + L E M+  G  P + TYNIL++GLCK G +S A
Sbjct: 351 CPNNA-ILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFA 409

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
           R    EM R+   P++I+Y  L+ G C++G + EA L+  E+ +R L    V YN LI  
Sbjct: 410 RDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICA 469

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           LCR   + VA  L   M  +G  PD+ TY  ++ G CK+  +  A   F+ ML  G   +
Sbjct: 470 LCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVAN 529

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              Y T I   L+ G   +A  L  +ML +G   D ITYN L+   CK+G++E+  EL  
Sbjct: 530 NVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYE 589

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
           +M+ DG   D I+   +I+   ++G +    +   + + +G  P +VTY  +++     G
Sbjct: 590 QMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVG 649

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
           R++ A   F  +QV+G+RP+  TYN  I+  C+   ++ A   F    E G +P+  T+ 
Sbjct: 650 RIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWN 709

Query: 668 ILI 670
           +L+
Sbjct: 710 VLV 712



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 121/340 (35%), Positives = 187/340 (55%)

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M  FG +P I TYN ++   CKEG +  A +L+ EM  RGC PN +TY +L+ G  + G 
Sbjct: 381 MINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGL 440

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           LE+A  ++ +M   GL +++  YN +IC    K  +  ALNL  EM T+G  P L TYN 
Sbjct: 441 LEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNS 500

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           LIYGLCK  R+ +A   F  ML    + + ++YNTL++   R G   +A  L +++  R 
Sbjct: 501 LIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRG 560

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
                +TYN LI   C+ G++E   +L E MI  G+  D I+  IM+NG CK+G +  A 
Sbjct: 561 CTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAF 620

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
           EF  + + +G  PD   Y + + G  K+G   EA  L + +  +G  PD  TYN  +   
Sbjct: 621 EFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQ 680

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           CK G + +A     + + +GF+P ++T+  +++  L+  +
Sbjct: 681 CKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSN 720



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 141/469 (30%), Positives = 225/469 (47%), Gaps = 34/469 (7%)

Query: 184 TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEFGIKPS 242
           ++K+ V + L +  +M   G +PDV+  N +I  L + N      + V RM+   G  P 
Sbjct: 264 SQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLR-GFYPD 322

Query: 243 IVTYNTMLDSFCKEGEMQEALELL-----------------WEMQGR------------- 272
            +TY  +L   C+ G++ EA ++L                 + M G+             
Sbjct: 323 NMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMI 382

Query: 273 --GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLV 330
             G  P+  TYN+L+ G  + G L  AR L+ +M + G + +  +Y  ++ G  + GLL 
Sbjct: 383 NFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLE 442

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
           EA  +  EM  RG+      YN LI  LC+  +V  A +   EM  K   PD+ +YN+L+
Sbjct: 443 EAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLI 502

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
           YG C+   I EAF LF  +     V   VTYNTLI  L R G  + A  L  +M+ +G  
Sbjct: 503 YGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCT 562

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
            D ITY  ++   CK+GN+    E + +M+  GL  D  +    I G  K+G    A+  
Sbjct: 563 LDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEF 622

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
             + + +GF PD++TYN +++GLCK+G ++EA  L  ++  +G  PD  TY + I    +
Sbjct: 623 LRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCK 682

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
            G +      F   +  G  P+ +T+ VL++    +   E  F    E+
Sbjct: 683 EGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 181/397 (45%), Gaps = 33/397 (8%)

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
           +G   T   Y + I  L   G+         +M  + ++     +  ++  Y ++G  G+
Sbjct: 106 KGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQ 165

Query: 402 AFLLFDELRSRNLV-PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           A  L  ++R+  L  PT  +Y+ +++ L      +VA  +  +M+++G+ P V T+ I++
Sbjct: 166 AIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVM 225

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
              C    +  A     +M + G  P+   Y T I    +    SEA +L EEM   G  
Sbjct: 226 KALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCM 285

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           PD+ T+N ++HGLCK+  + +A +L+ +M+  GF PD++TY  ++H    +G L   R +
Sbjct: 286 PDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKI 345

Query: 581 F------NN--------------------------MLRKGLSPTLVTYTVLIHAHAARGR 608
                  NN                          M+  G  P + TY +L+H     G 
Sbjct: 346 LIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGS 405

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           L  A    +EM  +G  PNVITY  L+NGLC+   +++A  +  +M   G+  N   Y  
Sbjct: 406 LSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNC 465

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           LI   C       AL L  EM  +  +PD  T+++L+
Sbjct: 466 LICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLI 502


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  285 bits (729), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 165/505 (32%), Positives = 267/505 (52%)

Query: 201 RNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQ 260
           RN  +P     + +  VL + G    A + +  M +F + P   + N  L    K GE  
Sbjct: 55  RNVCVPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGD 114

Query: 261 EALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII 320
            + +   +M G G +P   TYN++I    + G++  AR L   M K+GL     +YN +I
Sbjct: 115 LSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLI 174

Query: 321 CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
            GY + GLL E++ L EEM   G  P + TYN LI   CK+  +  A   F EM  K++ 
Sbjct: 175 DGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLK 234

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           P++ISY+TL+   C+ G +  A   F ++    L+P   TY++LID  C+ G+L  A  L
Sbjct: 235 PNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFML 294

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
            + M+ + +  +++TYT +++G C+ G ++ A E F  M + G+ P+  AYT  I G +K
Sbjct: 295 ADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIK 354

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
           +    +A  L  EM  K   PD++ +  +V GLC    LEE   ++ +M   G   + + 
Sbjct: 355 VRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVI 414

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           YT+++ A  + G+     +L   M   G   T+VT+  LI     RG ++ A  YF  M 
Sbjct: 415 YTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMP 474

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
              ++PNV  Y ALI+GLC+   I  A  LF +M+++ ++P+K  YT +I+ N   GN+Q
Sbjct: 475 DHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQ 534

Query: 681 EALRLYKEMLDREIEPDYCTHSALL 705
           EAL +  +M++  IE D   +++L+
Sbjct: 535 EALNMRNKMMEMGIELDLYAYTSLV 559



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 147/497 (29%), Positives = 248/497 (49%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
           F  M+  G+ P V   N +I  +   G  + AR ++  M + G+ P IVTYNT++D + K
Sbjct: 120 FRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGK 179

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
            G + E++ L  EM+  GC P+ +TYN LI  F +   + +A    R+M    LK +  S
Sbjct: 180 IGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVIS 239

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           Y+ +I    ++G++  A+    +M   G+ P   TY+ LI   CK G + +A     EML
Sbjct: 240 YSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEML 299

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
           +++V  +I++Y TLL G C  G + EA  LF  +    + P +  Y  LI G  +   ++
Sbjct: 300 QEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMD 359

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            A +L   M  + I PD++ +  +V G C    L   +    EM   G+  +   YTT +
Sbjct: 360 KAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLM 419

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
               K G+ +EA  L EEM   G    ++T+  L+ GLCK G ++EA     +M      
Sbjct: 420 DAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQ 479

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           P+   YT++I    +   +   + LF+ M  K + P  + YT +I  +   G  + A   
Sbjct: 480 PNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNM 539

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
            ++M   GI  ++  Y +L+ GL +  ++ QA     +M  +GI+P++   T L+ ++  
Sbjct: 540 RNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYE 599

Query: 676 AGNWQEALRLYKEMLDR 692
            GN  EA+ L  E++++
Sbjct: 600 LGNIDEAIELQNELVEK 616



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 138/442 (31%), Positives = 225/442 (50%), Gaps = 35/442 (7%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K  ++++ + +F +M   G  PDV   N +I         ++A E +R M +  +KP+
Sbjct: 177 YGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPN 236

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +++Y+T++D+ CKEG MQ A++   +M   G  PN  TY+ LI    + G L +A  L  
Sbjct: 237 VISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLAD 296

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +ML+  + ++  +Y  ++ G  E+G++ EA  L   M   GV P L  Y  LI+G  K  
Sbjct: 297 EMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVR 356

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYC---------------------------- 394
            +  A   F EM  K++ PDI+ + T+++G C                            
Sbjct: 357 SMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYT 416

Query: 395 -------RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
                  ++GN  EA  L +E+R      TVVT+  LIDGLC+ G ++ A      M + 
Sbjct: 417 TLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDH 476

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
            + P+V  YT +++G CK   +  A++ F+EM  K + PD+ AYT  I G LK G+  EA
Sbjct: 477 DLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEA 536

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
             ++ +M+  G   DL  Y  LV GL + G +++A + L +M+G G IPD    T ++  
Sbjct: 537 LNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRK 596

Query: 568 SLEMGDLRRGRDLFNNMLRKGL 589
             E+G++    +L N ++ KGL
Sbjct: 597 HYELGNIDEAIELQNELVEKGL 618



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 133/466 (28%), Positives = 234/466 (50%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F +M + GL PD+   N +I      G   ++  ++  M   G +P ++TYN +++SFC
Sbjct: 154 LFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFC 213

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K   M  A E   EM+ +   PN ++Y+ LI    + G ++ A     DM ++GL  +  
Sbjct: 214 KFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEF 273

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +Y+ +I    + G L EA  L +EM+   V   + TY  L+ GLC+ G +++A   F  M
Sbjct: 274 TYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAM 333

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
            +  V P++ +Y  L++G+ +  ++ +A  LF+E+R +++ P ++ + T++ GLC    L
Sbjct: 334 GKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKL 393

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           E  + +   M   GI  + + YT +++   K GN + A     EM   G +     +   
Sbjct: 394 EECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCAL 453

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I G  K G   EA      M      P++  Y  L+ GLCK   + +A +L  +M     
Sbjct: 454 IDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNM 513

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
           IPD I YT++I  +L+ G+ +   ++ N M+  G+   L  YT L+   +  G+++ A  
Sbjct: 514 IPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARK 573

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
           + +EM  KGI P+      L+     L  ID+A  L  ++ E+G++
Sbjct: 574 FLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKGLI 619



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 185/402 (46%), Gaps = 36/402 (8%)

Query: 340 VTRGV-APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
            TR V  P    ++ L   L + G +  A   F  M +  V+P   S N  L+   ++G 
Sbjct: 53  TTRNVCVPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGE 112

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
              +   F ++    + PTV TYN +I  +C+ GD+  A+ L E M   G+ PD++TY  
Sbjct: 113 GDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNT 172

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           +++G  K+G L  +   F EM   G +PD   Y   I    K      A+    EM  K 
Sbjct: 173 LIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKD 232

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL---- 574
             P++I+Y+ L+  LCK G ++ A +    M   G +P+  TY+S+I A+ + G+L    
Sbjct: 233 LKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAF 292

Query: 575 -------------------------------RRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
                                              +LF  M + G++P L  YT LIH H
Sbjct: 293 MLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGH 352

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
                ++ A   F+EM+ K I+P+++ +  ++ GLC   ++++   +  +M+E GI  N 
Sbjct: 353 IKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANP 412

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             YT L++    AGN  EA+ L +EM D   E    T  AL+
Sbjct: 413 VIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALI 454



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/381 (22%), Positives = 176/381 (46%), Gaps = 50/381 (13%)

Query: 105 RIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIG 164
           ++A++FF  + T+ G+  +EF + ++++   ++G L  A+ + + ++    H  L+++  
Sbjct: 254 QMAIKFFVDM-TRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEML--QEHVDLNIV-- 308

Query: 165 GGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS 224
                     +LD L     ++ M+ +   +F  M + G+ P+++    +I         
Sbjct: 309 ------TYTTLLDGL----CEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSM 358

Query: 225 VKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVL 284
            KA E++  M E  IKP I+ + T++   C E +++E   ++ EM+  G   N V Y  L
Sbjct: 359 DKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTL 418

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           +  + + G   +A  L+ +M  LG +V+  ++  +I G  ++GL+ EA+     M    +
Sbjct: 419 MDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDL 478

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYN----------------- 387
            P +A Y  LI GLCK   + DA+  F EM  KN+IPD I+Y                  
Sbjct: 479 QPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALN 538

Query: 388 ------------------TLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
                             +L++G  + G + +A     E+  + ++P       L+    
Sbjct: 539 MRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHY 598

Query: 430 RYGDLEVAQQLKENMINQGIL 450
             G+++ A +L+  ++ +G++
Sbjct: 599 ELGNIDEAIELQNELVEKGLI 619


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  285 bits (729), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 176/612 (28%), Positives = 295/612 (48%), Gaps = 10/612 (1%)

Query: 104 PRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSA-----YWVVETVVCVNMHGI 158
           P+ AL FF W+  + G K +     ++L IL+ +G LR A       +  T    N   +
Sbjct: 90  PQTALAFFNWIGQKHGFKHNVQSHVSMLNILVPNGYLRIAENMRILMIKSTDSSENALFV 149

Query: 159 LDVLIG-----GGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNR 213
           L++L             ++++  ++LL++ ++  M+++   V+ +ML + + P++   N 
Sbjct: 150 LEMLRSMNRRVDAFKFKLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNT 209

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
           ++      G  V+A      + + G+     TY +++  +C+   +  A  +   M  +G
Sbjct: 210 MVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKG 269

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
           C  N V+Y  LI GF     +++A  L   M +     +  +Y  II    + G   EAL
Sbjct: 270 CLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEAL 329

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
           N+ +EM  +   P + TY +LI  LC+     DA+     ML K +IP +++YN L+ GY
Sbjct: 330 NMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGY 389

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
           C+ G    A  +   + S N  P   TYN LI G CR  ++  A  L   M+ + + P+V
Sbjct: 390 CKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNV 449

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
           +TY I+++G CK G+L  A +  + M   GL PD + Y+  I    K G   EA  L E 
Sbjct: 450 VTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFES 509

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           +  KG   + + Y+ L+ G CK+G + +   LL KM+  G +P+ ITY S+I    +  +
Sbjct: 510 LKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKN 569

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
            +  R L + M+++ + P   TYT+LI         + A   F +M   G  P+V  Y A
Sbjct: 570 FKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTA 629

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
            I+  C   R+  A  L   M  +GI+P+   YT+ I+     G+   A  + K M +  
Sbjct: 630 FIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVG 689

Query: 694 IEPDYCTHSALL 705
            EP Y T+S L+
Sbjct: 690 CEPSYYTYSCLI 701



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 163/556 (29%), Positives = 263/556 (47%), Gaps = 29/556 (5%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+L Y +   V+    +F  M   G L +  +   +I    +     +A +++  M E  
Sbjct: 245 LILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDN 304

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
             P++ TY  ++ + C+ G   EAL +  EM  + C PN  TY VLI     +   + A+
Sbjct: 305 CWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAK 364

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            ++  ML+ GL  S  +YN +I GY +KGL   AL +   M +   +P   TYN LI G 
Sbjct: 365 KILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGF 424

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C+   +  A     +ML + + P++++YN L++G C+ G++G A+ L   +    LVP  
Sbjct: 425 CRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDE 484

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
            TY+  ID LC+ G +E A+ L E++  +GI  + + Y+ +++G CK+G +S  R   ++
Sbjct: 485 WTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDK 544

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           ML  G  P+   Y + I G  K  +  EA  L + M+ +   P   TY +L+  L K   
Sbjct: 545 MLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDE 604

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
            ++A+++  +M+  G  PD   YT+ IHA    G L+    L   M  KG+ P  + YT+
Sbjct: 605 FDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTL 664

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL----------------- 641
            I A+   G ++ AF     M   G  P+  TY+ LI  L                    
Sbjct: 665 FIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSG 724

Query: 642 ----------RRIDQAY--GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
                     RR+D  +   LF  M E G  PN  TY   I   C  G  + A RL+  M
Sbjct: 725 VASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHM 784

Query: 690 LDREIEPDYCTHSALL 705
            ++   P+   +++LL
Sbjct: 785 KEKGQSPNEDIYNSLL 800



 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 157/542 (28%), Positives = 262/542 (48%), Gaps = 31/542 (5%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V++ L +F++M  +   P V+    II  L   G   +A  +++ M E   +P++ TY  
Sbjct: 290 VDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTV 349

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++ S C++    +A ++L  M  +G  P+ VTYN LI G+ + G    A  ++  M    
Sbjct: 350 LICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNN 409

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
              +A +YN +I G+     + +A++L  +M+ R + P + TYNILI+G CK G +  A 
Sbjct: 410 CSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAY 469

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
                M    ++PD  +Y+  +   C+ G + EA  LF+ L+ + +    V Y+TLIDG 
Sbjct: 470 KLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGY 529

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G +   + L + M++ G +P+ ITY  +++G CK  N   AR   + M+++ ++P  
Sbjct: 530 CKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAA 589

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             YT  I   LK  +  +A+ + ++ML+ G  PD+  Y   +H  C  G L++A  L+ K
Sbjct: 590 DTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICK 649

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI-HAHAARG 607
           M   G +PD + YT  I A    G +     +   M   G  P+  TY+ LI H   A+ 
Sbjct: 650 MNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKP 709

Query: 608 R----------------------------LELAFMYFSEMQVKGIRPNVITYNALINGLC 639
           +                             E     F +M   G  PN  TY   I GLC
Sbjct: 710 KEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLC 769

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP--D 697
           ++  ++ A+ LF  M+E+G  PN+  Y  L+  +C  G + EA+R    M++    P  D
Sbjct: 770 KVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLD 829

Query: 698 YC 699
            C
Sbjct: 830 SC 831



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 136/432 (31%), Positives = 215/432 (49%)

Query: 281 YNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV 340
           YN+L+   SR   +++ + +  +ML   +  +  + N ++ GY + G +VEA     ++V
Sbjct: 172 YNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIV 231

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
             G++    TY  LI G C+   V  A   F  M  K  + + +SY  L++G+C +  + 
Sbjct: 232 QAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVD 291

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           EA  LF ++   N  PTV TY  +I  LC+ G    A  + + M  +   P+V TYT+++
Sbjct: 292 EALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLI 351

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
              C+  N   A++  N ML KGL P    Y   I G  K G ++ A  +   M +    
Sbjct: 352 CSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCS 411

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           P+  TYN L+ G C+  ++ +A  LL KM+     P+ +TY  +IH   + GDL     L
Sbjct: 412 PNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKL 471

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
            + M   GL P   TY+V I     RG +E A   F  ++ KGI+ N + Y+ LI+G C+
Sbjct: 472 LSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCK 531

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
           + ++     L   M   G +PN  TY  LI+  C   N++EA  L   M+ R+IEP   T
Sbjct: 532 VGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADT 591

Query: 701 HSALLLKQLDKD 712
           ++ L+   L  D
Sbjct: 592 YTILIDNLLKDD 603



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 151/540 (27%), Positives = 233/540 (43%), Gaps = 64/540 (11%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           + N ML  GL+P V   N +I      G S  A E+  +M      P+  TYN ++  FC
Sbjct: 366 ILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFC 425

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           +   + +A+ LL +M  R   PN VTYN+LI G  + G+L  A  L+  M + GL     
Sbjct: 426 RGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEW 485

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +Y+  I    ++GL+ EA +L E +  +G+      Y+ LI G CK G+VSD R    +M
Sbjct: 486 TYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKM 545

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL------ 428
           L    +P+ I+YN+L+ GYC+  N  EA LL D +  R++ P   TY  LID L      
Sbjct: 546 LSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEF 605

Query: 429 -----------------------------CRYGDLEVAQQLKENMINQGILPDVITYTIM 459
                                        C +G L+ A+ L   M  +GI+PD + YT+ 
Sbjct: 606 DQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLF 665

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI--------------------AGEL 499
           ++   + G++  A      M   G +P  + Y+  I                    +  +
Sbjct: 666 IDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGV 725

Query: 500 KLGDTSEAYR---------LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
              D S  +R         L  +M   G  P+  TY   + GLCK+G LE A+ L   M 
Sbjct: 726 ASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMK 785

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
             G  P+   Y S++  S ++G         + M+     P L +  +L+      G  E
Sbjct: 786 EKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDE 845

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
            A   F          + + +  LI+GL +    D+   LF  ME +G   +  TY++LI
Sbjct: 846 KAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLI 905



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 118/433 (27%), Positives = 194/433 (44%), Gaps = 29/433 (6%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           M  +GL+PD    +  I  L   G   +AR ++  + E GIK + V Y+T++D +CK G+
Sbjct: 475 MNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGK 534

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           + +   LL +M   GC PN +TYN LI G+ +    ++AR L+  M+K  ++ +A +Y  
Sbjct: 535 VSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTI 594

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           +I    +     +A ++ ++M++ G  P +  Y   I+  C  GR+ DA     +M  K 
Sbjct: 595 LIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKG 654

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC--------- 429
           ++PD + Y   +  Y R G+I  AF +   +      P+  TY+ LI  L          
Sbjct: 655 IMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSS 714

Query: 430 --------------------RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
                               R  D E    L   M   G  P+  TY   + G CK+G L
Sbjct: 715 SSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCL 774

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
            +A   F+ M  KG  P+   Y + +    +LG   EA R  + M+     P L +  +L
Sbjct: 775 EVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLL 834

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           + GL   G+ E+A  +    +   +  D + +  +I   L+ G   +  DLF  M  +G 
Sbjct: 835 LCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGC 894

Query: 590 SPTLVTYTVLIHA 602
                TY++LI  
Sbjct: 895 QIHPKTYSMLIEG 907



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 107/209 (51%)

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           EML     P++ T N +V+G CKLG++ EA   + K+V  G   D  TYTS+I       
Sbjct: 194 EMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNK 253

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
           ++     +F +M  KG     V+YT LIH      R++ A   FS+M      P V TY 
Sbjct: 254 NVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYT 313

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
            +I  LC+L R  +A  +F +M E+   PN +TYT+LI   C   N+ +A ++   ML++
Sbjct: 314 VIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEK 373

Query: 693 EIEPDYCTHSALLLKQLDKDYKVHAVEYL 721
            + P   T++AL+     K     A+E L
Sbjct: 374 GLIPSVVTYNALIDGYCKKGLSASALEIL 402



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 75/148 (50%)

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
           + ++  ML   ++P + T   +++ +   G +  A +Y S++   G+  +  TY +LI G
Sbjct: 189 KSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILG 248

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
            CR + +D A  +F+ M  +G L N+ +YT LI+  C A    EAL+L+ +M +    P 
Sbjct: 249 YCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPT 308

Query: 698 YCTHSALLLKQLDKDYKVHAVEYLESLT 725
             T++ ++        K  A+   + +T
Sbjct: 309 VRTYTVIIFALCQLGRKTEALNMFKEMT 336



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 69/302 (22%), Positives = 116/302 (38%), Gaps = 31/302 (10%)

Query: 156 HGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRII 215
           H + D ++  G  S   + I    +  Y     ++   ++  KM   G++PD       I
Sbjct: 609 HDMFDQMLSTG--SHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFI 666

Query: 216 KVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLD------------------------ 251
                 G    A  + + M E G +PS  TY+ ++                         
Sbjct: 667 DAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVA 726

Query: 252 ----SFC-KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
               S C +  + +  L+L  +M   GC+PN  TY   ITG  + G LE A  L   M +
Sbjct: 727 SNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKE 786

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
            G   +   YN ++    + GL  EA+   + M+     P L +  +L+ GL   G    
Sbjct: 787 KGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEK 846

Query: 367 ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
           A+  F   L+     D + +  L+ G  + G   +   LF  + ++       TY+ LI+
Sbjct: 847 AKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIE 906

Query: 427 GL 428
           G 
Sbjct: 907 GF 908


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  285 bits (729), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 168/531 (31%), Positives = 269/531 (50%), Gaps = 4/531 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V+++M   G+ PDV   N ++K L        A  +   M   G+ P   T+ T++  F 
Sbjct: 76  VYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFV 135

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           +EG ++ AL +   M   GCS   VT NVLI G+ + G +E A G I+  +  G +    
Sbjct: 136 EEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQI 195

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +YN  + G  +   +  AL + + MV  G  P + TYNI++  LCK G++ +A+    +M
Sbjct: 196 TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 255

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           + +  +PDI ++NTL+   C    + EA  L  ++  + + P V T+N LI+ LC+ GD 
Sbjct: 256 VDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDP 315

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
            +A +L E M N G  PD +TY  +++  C +G L  A +   +M   G       Y T 
Sbjct: 316 HLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTI 375

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I G  K     EA  + ++M  +G   + IT+N L+ GLCK   +++A EL+ +M+ +G 
Sbjct: 376 IDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGL 435

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            P++ITY SI+    + GD+++  D+   M   G    +VTY  LI+     GR ++A  
Sbjct: 436 QPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALK 495

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
               M++KG+RP    YN ++  L R   I  A  LF +M E G  P+  TY I+    C
Sbjct: 496 VLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLC 555

Query: 675 NAGN-WQEALRLYKEMLDREIEPDYCTHSAL---LLKQLDKDYKVHAVEYL 721
             G   +EA     EM+D+   P++ +   L   LL     DY + A+E +
Sbjct: 556 RGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEII 606



 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 143/460 (31%), Positives = 236/460 (51%)

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
           FGI+   V YN +L+   +  +M+    +  EM  RG  P+ VT+N L+    R  ++  
Sbjct: 48  FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 107

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  ++ +M   G+     ++  ++ G+ E+G +  AL ++  M+  G + T  T N+LI 
Sbjct: 108 AVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 167

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           G CK GRV DA     + +     PD I+YNT + G C++ ++G A  + D +      P
Sbjct: 168 GYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 227

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
            V TYN +++ LC+ G LE A+ +   M+++G LPD+ T+  ++   C    L  A +  
Sbjct: 228 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 287

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
            ++  KG+ PD + +   I    K+GD   A RL EEM   G  PD +TYN L+  LC L
Sbjct: 288 RQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSL 347

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G L +A +LL+ M   G     ITY +II    +   +    ++F+ M  +G+S   +T+
Sbjct: 348 GKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF 407

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
             LI       +++ AF   ++M  +G++PN ITYN+++   C+   I +A  +   M  
Sbjct: 408 NTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTA 467

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
            G   +  TY  LIN  C AG  Q AL++ + M  + + P
Sbjct: 468 NGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRP 507



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 143/485 (29%), Positives = 224/485 (46%), Gaps = 21/485 (4%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVV---CVNMHGILDVLIGGGLSSCVSIKI 175
           GV  DE  F T+++  +E G + +A  V   ++   C      ++VLI G          
Sbjct: 119 GVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING---------- 168

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
                  Y K   VE  L    + + +G  PD    N  +  L  N     A +V  +M 
Sbjct: 169 -------YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMV 221

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
           + G  P + TYN +++  CK G+++EA  +L +M  RGC P+  T+N LI        LE
Sbjct: 222 QEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLE 281

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
           +A  L R +   G+    +++N +I    + G    AL L EEM   G  P   TYN LI
Sbjct: 282 EALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLI 341

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
             LC  G++  A     +M         I+YNT++ G C+   I EA  +FD++  + + 
Sbjct: 342 DNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS 401

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
              +T+NTLIDGLC+   ++ A +L   MI++G+ P+ ITY  ++   CK G++  A + 
Sbjct: 402 RNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADI 461

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
              M   G + D   Y T I G  K G T  A ++   M  KG  P    YN ++  L +
Sbjct: 462 LETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFR 521

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD-LRRGRDLFNNMLRKGLSPTLV 594
             ++ +A  L R+M   G  PD +TY  +       G  ++   D    M+ KG  P   
Sbjct: 522 RNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFS 581

Query: 595 TYTVL 599
           ++ +L
Sbjct: 582 SFRML 586



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 132/434 (30%), Positives = 214/434 (49%), Gaps = 2/434 (0%)

Query: 294 LEQARGLIRDMLK--LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
            + A  LI + L+   G++     YN ++    E   +    ++  EM  RG+ P + T+
Sbjct: 33  FDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTF 92

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           N L+  LC+  +V  A     EM  + V PD  ++ TL+ G+   G+I  A  +   +  
Sbjct: 93  NTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLE 152

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
                T VT N LI+G C+ G +E A    +  I  G  PD ITY   VNG C+  ++  
Sbjct: 153 MGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGH 212

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A +  + M+++G  PD F Y   +    K G   EA  +  +M+ +G  PD+ T+N L+ 
Sbjct: 213 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIA 272

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
            LC    LEEA +L R++   G  PD  T+  +I+A  ++GD      LF  M   G +P
Sbjct: 273 ALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP 332

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
             VTY  LI    + G+L  A     +M+  G   + ITYN +I+GLC+  RI++A  +F
Sbjct: 333 DEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVF 392

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDK 711
             M+ +GI  N  T+  LI+  C      +A  L  +M+   ++P+  T++++L     +
Sbjct: 393 DQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQ 452

Query: 712 DYKVHAVEYLESLT 725
                A + LE++T
Sbjct: 453 GDIKKAADILETMT 466



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 192/393 (48%), Gaps = 43/393 (10%)

Query: 151 VCVNMH-----GILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLL 205
           +C N H      ++DV++  G      +   ++++    K   +E+   + N+M+  G L
Sbjct: 204 LCQNDHVGHALKVMDVMVQEGHDP--DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL 261

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           PD+   N +I  L       +A ++ R +   G+ P + T+N ++++ CK G+   AL L
Sbjct: 262 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRL 321

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
             EM+  GC+P+ VTYN LI      G+L +A  L++DM   G   S  +YN II G  +
Sbjct: 322 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 381

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
           K  + EA  + ++M  +G++    T+N LI GLCK  ++ DA     +M+ + + P+ I+
Sbjct: 382 KMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNIT 441

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           YN++L  YC+ G+I +A  + + + +      VVTY TLI+GLC+ G  +VA ++   M 
Sbjct: 442 YNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMR 501

Query: 446 NQGILP-----------------------------------DVITYTIMVNGSCKMGN-L 469
            +G+ P                                   D +TY I+  G C+ G  +
Sbjct: 502 IKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPI 561

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
             A +F  EM+ KG  P+  ++     G L LG
Sbjct: 562 KEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLG 594


>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 909

 Score =  285 bits (729), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 168/551 (30%), Positives = 273/551 (49%), Gaps = 34/551 (6%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +E  L + + M+R G +P   NC+ +I  LR      +A  +   +G+ G+ P++  YN 
Sbjct: 307 LEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNA 366

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++D  CK     +A  L  EM GRG  PN VTY +LI    + G +E A  L   M   G
Sbjct: 367 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 426

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           +KV+ + YN +I GY ++G L  A  L   MV  G+ PT A+Y+ LI GLC+ G +S   
Sbjct: 427 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCM 486

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               EM  + +  +  ++  L+ G+C+   + EA  LFD++   N++P  VT+N +I+G 
Sbjct: 487 ELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY 546

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C  G++  A QL + M+  G+ PD  TY  +++G C    +S A EF  ++       + 
Sbjct: 547 CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNN 606

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
           F+ T  + G  + G  +E Y L +EM  +G   DL+++ ++V+   K    E++  L R+
Sbjct: 607 FSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFRE 666

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M   G  PD I YT +I A  +  ++ +  + ++ M+  G SP  VT+TVLI+     G 
Sbjct: 667 MKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGY 726

Query: 609 LELAFMYFSEMQVKGIRPNVITYNA----------------------------------L 634
           L  A +   EM    + PN  TYN                                   L
Sbjct: 727 LGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNIL 786

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           I GLC+  +I +A  L   + E G  P+  +Y+ +I+E C  G+  +A  L+ EML + +
Sbjct: 787 IKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGL 846

Query: 695 EPDYCTHSALL 705
           +PD   ++  +
Sbjct: 847 KPDVVAYNIFI 857



 Score =  238 bits (607), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 149/541 (27%), Positives = 275/541 (50%), Gaps = 16/541 (2%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           A R F+ +  + G++ +E  +  ++  L + G+       +E  +C     + D +   G
Sbjct: 380 ADRLFKEMAGR-GLEPNEVTYAILIHALCKRGM-------IEDALC-----LFDKMRDKG 426

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
           +   V++   + L+  Y K+  +++   + + M++ GL P   + + +I  L  NG    
Sbjct: 427 IK--VTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSS 484

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
             E++R M E GI  +  T+  +++ FCK+ +M EA  L  +M      PN VT+NV+I 
Sbjct: 485 CMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIE 544

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G+   G + +A  L   M+++GLK   ++Y  +I G      + +A     ++       
Sbjct: 545 GYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVL 604

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
              +   L+YG  + GR ++  H + EM  + V  D++S+  ++Y   +  +  ++ +LF
Sbjct: 605 NNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLF 664

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
            E++ + + P  + Y  +ID L +  ++  A    + M+  G  P+ +T+T+++N  CK 
Sbjct: 665 REMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKS 724

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G L  A     EML   + P++F Y   +      GD  +A  L   ML +G    ++++
Sbjct: 725 GYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSF 783

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           N+L+ GLCK G ++EA +L+ K+   GF PD I+Y++IIH   +MGD+ +  +L+N ML 
Sbjct: 784 NILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLY 843

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
           KGL P +V Y + I      G  + A   ++ M   G++PN  TY AL++G+  +    Q
Sbjct: 844 KGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMVSKGQ 903

Query: 647 A 647
           A
Sbjct: 904 A 904



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 133/514 (25%), Positives = 244/514 (47%), Gaps = 35/514 (6%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           AR+++  M + G+      Y   + ++C+   +  A  L+  M+  G   + V YNVL+ 
Sbjct: 205 ARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMY 264

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G  +N  +++A  +   M+ +G+     +Y  ++ G+     L  AL +  +M+  G  P
Sbjct: 265 GLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVP 324

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
           + A  + +I  L K   V +A     ++    ++P++ +YN L+   C++    +A  LF
Sbjct: 325 SEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLF 384

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
            E+  R L P  VTY  LI  LC+ G +E A  L + M ++GI   V  Y  ++NG CK 
Sbjct: 385 KEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQ 444

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G+L  AR   + M+++GL P   +Y+  IAG  + GD S    L  EM  +G   +  T+
Sbjct: 445 GSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTF 504

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
             L++G CK   ++EA  L  KM+    IP+ +T+  +I     +G++R+   L++ M+ 
Sbjct: 505 TALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVE 564

Query: 587 KGLSPTLVTY-----------------------------------TVLIHAHAARGRLEL 611
            GL P   TY                                   T L++     GR   
Sbjct: 565 MGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTE 624

Query: 612 AFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
            +  + EM V+G++ +++++  ++    +    +++  LF +M+E+G+ P+   YT +I+
Sbjct: 625 TYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMID 684

Query: 672 ENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
                 N  +AL  + +M+     P+  TH+ L+
Sbjct: 685 ALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLI 718



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 110/223 (49%), Gaps = 3/223 (1%)

Query: 184 TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
           +K+  + Q L  +++M+ +G  P+      +I  L  +G+   A  + + M    + P+ 
Sbjct: 687 SKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNK 746

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEM-QGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            TYN  LD F  EG+M++A +L   M QG   S   V++N+LI G  + G++++A  L+ 
Sbjct: 747 FTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASI--VSFNILIKGLCKAGKIQEAIDLMS 804

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            + + G      SY+ II    + G + +A  L  EM+ +G+ P +  YNI I      G
Sbjct: 805 KITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHG 864

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
               A   +  M+R  V P+  +Y  LL G     + G+A LL
Sbjct: 865 ESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMVSKGQALLL 907



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 35/226 (15%)

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
           L+ G   +  T + ++  L K+     A +L  KM+  G   D   YT+ I A  E  +L
Sbjct: 178 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 237

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
              R L   M  +G+  + V Y VL++      R++ A    + M   G+  + +TY  L
Sbjct: 238 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 297

Query: 635 INGLCRLRR-----------------------------------IDQAYGLFIDMEEEGI 659
           + G CR+                                     +++A+ L   + + G+
Sbjct: 298 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 357

Query: 660 LPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +PN + Y  LI++ C    + +A RL+KEM  R +EP+  T++ L+
Sbjct: 358 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILI 403


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  285 bits (729), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 148/502 (29%), Positives = 270/502 (53%), Gaps = 11/502 (2%)

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M E G   ++VT+ T+++  C+EG + +AL L+  M   G  P+ VTY  ++ G  + G+
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
              A  ++R M +  +K +   Y+ I+    + G  ++A N+  EM  +G+ P + TYN 
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           +I G C +G+ SDA     +M+ +N+ PD+++++ L+  + + G +  A  L+ E+  RN
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK-------- 465
           + PT +TY+++IDG C++  LE A+ + + M+++G  PD+IT   +++G C+        
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240

Query: 466 ---MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
              +GN+++A++ F EM+  G+ PD     T +AG  + G   +A  + +         D
Sbjct: 241 FCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLD 300

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
             T N++++G+CK   ++EA +L   +  +G   D +TY  +I   ++ G+  R  D++ 
Sbjct: 301 TATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYL 360

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
            ML KG+ P+ VTY  ++     + RLE A      M  +G  P+V+T++ LI G C+  
Sbjct: 361 EMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAG 420

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
           R+D    LF +M + G++ +  TY  LI+  C  G+   A  +++EM+   + PD  T  
Sbjct: 421 RVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFR 480

Query: 703 ALLLKQLDKDYKVHAVEYLESL 724
           ++L     K      +  LE L
Sbjct: 481 SMLAGLCTKAELQKGLTMLEDL 502



 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 157/483 (32%), Positives = 253/483 (52%), Gaps = 11/483 (2%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           ++  V Q L + ++M+  G  PD      I+  +   G +V A  + R M E  IK ++V
Sbjct: 22  REGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLRKMDESQIKANVV 81

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
            Y+ ++D  CK+G   +A  +  EM  +G  PN +TYN +I G+   G+   A  L+RDM
Sbjct: 82  IYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDM 141

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           ++  +     +++ +I  + ++G +  A  L  EM+ R + PT  TY+ +I G CK  R+
Sbjct: 142 IERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRL 201

Query: 365 SDARHRFFEMLRKNVIPDIISYNT-----------LLYGYCRSGNIGEAFLLFDELRSRN 413
            DA+H F  M+ K   PDII+ NT           L++G+C+ GN+  A  LF E+ S  
Sbjct: 202 EDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNG 261

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           + P +VT NTL+ GLC  G LE A ++ +      +  D  T  I++NG CK   +  A 
Sbjct: 262 VSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAW 321

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
           + FN +   G++ D   Y   I   +K G+   A  +  EML KG  P  +TYN +V G 
Sbjct: 322 DLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGF 381

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
           CK   LEEA +++  MV +G  PD +T++++I    + G +  G +LF+ M ++GL    
Sbjct: 382 CKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADT 441

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
           +TY  LIH     G L  A   F EM   G+ P+ IT+ +++ GLC    + +   +  D
Sbjct: 442 ITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLED 501

Query: 654 MEE 656
           +++
Sbjct: 502 LQK 504



 Score =  268 bits (685), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 151/513 (29%), Positives = 264/513 (51%), Gaps = 14/513 (2%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           M+  G   +V     ++  L   G  ++A  +   M E G +P  VTY T+++  CK G+
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
              AL +L +M       N V Y+ ++    ++G   +A+ +  +M + G+  +  +YN 
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           +I GY   G   +A  L  +M+ R + P + T++ LI    K G+VS A   + EMLR+N
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR-------- 430
           + P  I+Y++++ G+C+   + +A  +FD + S+   P ++T NTLIDG CR        
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240

Query: 431 ---YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
               G++ VAQ L + MI+ G+ PD++T   ++ G C+ G L  A E F    +  +  D
Sbjct: 241 FCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLD 300

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
                  I G  K     EA+ L   +   G   D++TYN+L+    K G+   A ++  
Sbjct: 301 TATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYL 360

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
           +M+  G IP  +TY S++    +   L   R + ++M+ +G SP +VT++ LI  +   G
Sbjct: 361 EMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAG 420

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
           R++     FSEM  +G+  + ITYNALI+G C++  ++ A  +F +M   G+ P+  T+ 
Sbjct: 421 RVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFR 480

Query: 668 ILINENCNAGNWQEALRLYKEM---LDREIEPD 697
            ++   C     Q+ L + +++   +D E+E D
Sbjct: 481 SMLAGLCTKAELQKGLTMLEDLQKSVDHELEDD 513



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 162/298 (54%), Gaps = 11/298 (3%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRII----KVLRD--NGFSVK-----AREVY 231
           + K S +E    +F+ M+  G  PD+   N +I    +  R   +GF        A++++
Sbjct: 195 FCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLF 254

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
           + M   G+ P IVT NT+L   C+ G++++ALE+    Q      +  T N++I G  + 
Sbjct: 255 QEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKG 314

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
            ++++A  L   +   G++    +YN +I  + ++G  + A ++  EM+ +G+ P+  TY
Sbjct: 315 NKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTY 374

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           N ++ G CK  R+ +AR     M+ +   PD+++++TL+ GYC++G + +   LF E+  
Sbjct: 375 NSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQ 434

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
           R LV   +TYN LI G C+ GDL  AQ + E M++ G+ PD IT+  M+ G C    L
Sbjct: 435 RGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAEL 492



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 62/124 (50%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K++ +E+   + + M+  G  PDV   + +IK     G      E++  M + G+   
Sbjct: 381 FCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVAD 440

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            +TYN ++  FCK G++  A ++  EM   G  P+ +T+  ++ G     EL++   ++ 
Sbjct: 441 TITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLE 500

Query: 303 DMLK 306
           D+ K
Sbjct: 501 DLQK 504


>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic; Flags: Precursor
          Length = 838

 Score =  285 bits (729), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 198/700 (28%), Positives = 333/700 (47%), Gaps = 92/700 (13%)

Query: 99  RIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMH-- 156
           R +  P+ AL FFR              +C ++ +L+++ LL +A  V+  ++  N+   
Sbjct: 114 RSKVNPKTALDFFRLASDSFSFSFSLRSYCLLIGLLLDANLLSAARVVLIRLINGNVPVL 173

Query: 157 --GILDVLIG-----GGLSSC----VSIKILDLLLLIYTKKSMVEQCLL---VFNKMLRN 202
             G+ D  +        LS C    +  K+ DLL+ +Y  +   + C L   VF  +   
Sbjct: 174 PCGLRDSRVAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANK 233

Query: 203 GLLPDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQE 261
           G+ P    CN ++  L R N F  K  E + ++ + G+ P +  + T +++FCK G+++E
Sbjct: 234 GMFPSKTTCNILLTSLVRANEFQ-KCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEE 291

Query: 262 ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA---------RGL------------ 300
           A++L  +M+  G +PN VT+N +I G    G  ++A         RG+            
Sbjct: 292 AVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVK 351

Query: 301 --------------IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
                         +++M K G   +   YN +I  + E G L +A+ +++ MV++G++ 
Sbjct: 352 GLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSL 411

Query: 347 TLATYNILIYGLCKWGRVSDAR---------------------------HRFF------- 372
           T +TYN LI G CK G+  +A                            H  F       
Sbjct: 412 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFV 471

Query: 373 -EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY 431
            EML +N+ P      TL+ G C+ G   +A  L+ +  ++  V    T N L+ GLC  
Sbjct: 472 GEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEA 531

Query: 432 GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAY 491
           G L+ A ++++ ++ +G + D ++Y  +++G C    L  A  F +EM+++GL+PD + Y
Sbjct: 532 GKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 591

Query: 492 TTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
           +  I G   +    EA +  ++    G  PD+ TY+V++ G CK    EE  E   +M+ 
Sbjct: 592 SILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMS 651

Query: 552 DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLEL 611
               P+ + Y  +I A    G L    +L  +M  KG+SP   TYT LI   +   R+E 
Sbjct: 652 KNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEE 711

Query: 612 AFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
           A + F EM+++G+ PNV  Y ALI+G  +L ++ +   L  +M  + + PNK TYT++I 
Sbjct: 712 AKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIG 771

Query: 672 ENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL---LKQ 708
                GN  EA RL  EM ++ I PD  T+   +   LKQ
Sbjct: 772 GYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQ 811



 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 166/537 (30%), Positives = 255/537 (47%), Gaps = 35/537 (6%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL-----RDNGFSVKAREVYR----- 232
           + K   VE+ + +F+KM   G+ P+V   N +I  L      D  F  K + V R     
Sbjct: 283 FCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPT 342

Query: 233 -------------------------MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLW 267
                                     M + G  P+++ YN ++DSF + G + +A+E+  
Sbjct: 343 LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKD 402

Query: 268 EMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKG 327
            M  +G S    TYN LI G+ +NG+ + A  L+++ML +G  V+  S+  +IC      
Sbjct: 403 LMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHL 462

Query: 328 LLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYN 387
           +   AL    EM+ R ++P       LI GLCK G+ S A   +F+ L K  + D  + N
Sbjct: 463 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 522

Query: 388 TLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
            LL+G C +G + EAF +  E+  R  V   V+YNTLI G C    L+ A    + M+ +
Sbjct: 523 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 582

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
           G+ PD  TY+I++ G   M  +  A +F+++  R G+ PD + Y+  I G  K   T E 
Sbjct: 583 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 642

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
               +EM++K   P+ + YN L+   C+ G L  A EL   M   G  P+  TYTS+I  
Sbjct: 643 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 702

Query: 568 SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
              +  +   + LF  M  +GL P +  YT LI  +   G++        EM  K + PN
Sbjct: 703 MSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 762

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
            ITY  +I G  R   + +A  L  +M E+GI+P+  TY   I      G   EA +
Sbjct: 763 KITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 819



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 191/389 (49%), Gaps = 1/389 (0%)

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
           AL++   +  +G+ P+  T NIL+  L +          F +++ K V PD+  + T + 
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAIN 281

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
            +C+ G + EA  LF ++    + P VVT+NT+IDGL   G  + A   KE M+ +G+ P
Sbjct: 282 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 341

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
            +ITY+I+V G  +   +  A     EM +KG  P+   Y   I   ++ G  ++A  ++
Sbjct: 342 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 401

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
           + M++KG      TYN L+ G CK G  + A  LL++M+  GF  +  ++TS+I      
Sbjct: 402 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 461

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
                       ML + +SP     T LI      G+   A   + +   KG   +  T 
Sbjct: 462 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 521

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           NAL++GLC   ++D+A+ +  ++   G + ++ +Y  LI+  C      EA     EM+ 
Sbjct: 522 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 581

Query: 692 REIEPDYCTHSALLLKQLDKDYKVHAVEY 720
           R ++PD  T+S L+    + +    A+++
Sbjct: 582 RGLKPDNYTYSILICGLFNMNKVEEAIQF 610



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 171/361 (47%), Gaps = 35/361 (9%)

Query: 188 MVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
           M +  L    +ML   + P       +I  L  +G   KA E++      G      T N
Sbjct: 463 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 522

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
            +L   C+ G++ EA  +  E+ GRGC  + V+YN LI+G     +L++A   + +M+K 
Sbjct: 523 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 582

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           GLK   ++Y+ +ICG      + EA+   ++    G+ P + TY+++I G CK  R  + 
Sbjct: 583 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 642

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG--------------------------- 400
           +  F EM+ KNV P+ + YN L+  YCRSG +                            
Sbjct: 643 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 702

Query: 401 --------EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
                   EA LLF+E+R   L P V  Y  LIDG  + G +   + L   M ++ + P+
Sbjct: 703 MSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 762

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
            ITYT+M+ G  + GN++ A    NEM  KG+ PD   Y   I G LK G   EA++  +
Sbjct: 763 KITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSD 822

Query: 513 E 513
           E
Sbjct: 823 E 823


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  285 bits (729), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 155/531 (29%), Positives = 285/531 (53%), Gaps = 3/531 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIK-VLRDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
           V+  + +F  M+++   P +   N+++  V + N F +    +   M   GI   + TY+
Sbjct: 64  VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFEL-VISLGEQMQTLGISHDLYTYS 122

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
             ++ FC+  ++  AL +L +M   G  P+ VT + L+ G+  +  +  A  L+  M+++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           G K    ++  +I G        EA+ L ++MV RG  P L TY  ++ GLCK G +  A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
                +M +  +  D++ YNT++ G C+  ++ +A  LF E+ ++ + P V TY++LI  
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           LC YG    A +L  +MI + I P+V+T++ +++   K G L  A + ++EM+++ + PD
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
            F Y++ I G        EA  + E M++K   P+++TY+ L+ G CK   +EE  EL R
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
           +M   G + + +TYT++IH   +  D    + +F  M+  G+ P ++TY +L+      G
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
           +L  A + F  +Q   + P++ TYN +I G+C+  +++  + LF ++  +G+ PN   Y 
Sbjct: 483 KLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYN 542

Query: 668 ILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQL-DKDYKVHA 717
            +I+  C  G+ +EA  L K+M +    P+  T++ L+  +L D D +  A
Sbjct: 543 TMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASA 593



 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 144/484 (29%), Positives = 255/484 (52%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PSIV +N +L +  K  + +  + L  +MQ  G S +  TY++ I  F R  +L  A  +
Sbjct: 81  PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  M+KLG +    + + ++ GY     + +A+ L ++MV  G  P   T+  LI+GL  
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
             + S+A     +M+++   PD+++Y T++ G C+ G+I  A  L  ++    +   VV 
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YNT+IDGLC+Y  ++ A  L   M N+GI PDV TY+ +++  C  G  S A    ++M+
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            + + P+   ++  I   +K G   EA +L +EM+ +   PD+ TY+ L++G C    L+
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA  +   M+     P+ +TY+++I    +   +  G +LF  M ++GL    VTYT LI
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
           H        + A M F +M   G+ PN++TYN L++GLC+  ++ +A  +F  ++   + 
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 500

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
           P+ YTY I+I   C AG  ++   L+  +  + + P+   ++ ++     K  K  A   
Sbjct: 501 PDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSL 560

Query: 721 LESL 724
           L+ +
Sbjct: 561 LKKM 564



 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 149/494 (30%), Positives = 256/494 (51%), Gaps = 10/494 (2%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR-----EVYRMMGEF 237
           + ++S +   L V  KM++ G  PD+   + ++     NG+    R      +   M E 
Sbjct: 128 FCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLL-----NGYCHSKRISDAVALVDQMVEM 182

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G KP   T+ T++       +  EA+ L+ +M  RGC P+ VTY  ++ G  + G+++ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L++ M K  ++     YN II G  +   + +ALNL  EM  +G+ P + TY+ LI  
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           LC +GR SDA     +M+ + + P++++++ L+  + + G + EA  L+DE+  R++ P 
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           + TY++LI+G C +  L+ A+ + E MI++   P+V+TY+ ++ G CK   +    E F 
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           EM ++GL  +   YTT I G  +  D   A  + ++M++ G  P+++TYN+L+ GLCK G
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            L +A  +   +      PD  TY  +I    + G +  G +LF N+  KG+SP ++ Y 
Sbjct: 483 KLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYN 542

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
            +I     +G  E A     +M+  G  PN  TYN LI    R    + +  L  +M   
Sbjct: 543 TMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSC 602

Query: 658 GILPNKYTYTILIN 671
           G   +  T  ++ N
Sbjct: 603 GFAGDASTIGLVTN 616



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 141/438 (32%), Positives = 238/438 (54%), Gaps = 10/438 (2%)

Query: 180 LLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGI 239
           L ++ K S   + + + ++M++ G  PD+     ++  L   G    A  + + M +  I
Sbjct: 198 LFLHNKAS---EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKI 254

Query: 240 KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
           +  +V YNT++D  CK   M +AL L  EM  +G  P+  TY+ LI+     G    A  
Sbjct: 255 EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 314

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
           L+ DM++  +  +  +++ +I  + ++G LVEA  L +EM+ R + P + TY+ LI G C
Sbjct: 315 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 374

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
              R+ +A+H F  M+ K+  P++++Y+TL+ G+C++  + E   LF E+  R LV   V
Sbjct: 375 MHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
           TY TLI G  +  D + AQ + + M++ G+ P+++TY I+++G CK G L+ A   F  +
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 494

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
            R  ++PD + Y   I G  K G   + + L   +  KG  P++I YN ++ G C+ GS 
Sbjct: 495 QRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSK 554

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL---SPTLVTY 596
           EEA+ LL+KM  DG +P+  TY ++I A L  GD     +L   M   G    + T+   
Sbjct: 555 EEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 614

Query: 597 TVLIHAHAARGRLELAFM 614
           T ++H     GRL+ +F+
Sbjct: 615 TNMLH----DGRLDKSFL 628



 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 133/448 (29%), Positives = 229/448 (51%)

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
           ++ +A++L  +M      P+ V +N L++  ++  + E    L   M  LG+    ++Y+
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
             I  +  +  L  AL +  +M+  G  P + T + L+ G C   R+SDA     +M+  
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
              PD  ++ TL++G        EA  L D++  R   P +VTY T+++GLC+ GD+++A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
             L + M    I  DV+ Y  +++G CK  ++  A   F EM  KG++PD F Y++ I+ 
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
               G  S+A RL  +M+ +   P+++T++ L+    K G L EA +L  +M+     PD
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
             TY+S+I+       L   + +F  M+ K   P +VTY+ LI       R+E     F 
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
           EM  +G+  N +TY  LI+G  + R  D A  +F  M   G+ PN  TY IL++  C  G
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482

Query: 678 NWQEALRLYKEMLDREIEPDYCTHSALL 705
              +A+ +++ +    +EPD  T++ ++
Sbjct: 483 KLAKAMVVFEYLQRSTMEPDIYTYNIMI 510



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 98/205 (47%), Gaps = 3/205 (1%)

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
           +L + L  +  +++A +L   MV     P  + +  ++ A  +M        L   M   
Sbjct: 53  ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
           G+S  L TY++ I+    R +L LA    ++M   G  P+++T ++L+NG C  +RI  A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172

Query: 648 YGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL--- 704
             L   M E G  P+ +T+T LI+         EA+ L  +M+ R  +PD  T+  +   
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232

Query: 705 LLKQLDKDYKVHAVEYLESLTLGAE 729
           L K+ D D  +  ++ +E   + A+
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKIEAD 257



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 100/209 (47%), Gaps = 15/209 (7%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
            +  FR + +Q G+  +   + T++    ++    +A  V + +V V +H          
Sbjct: 417 GMELFREM-SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHP--------- 466

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
                +I   ++LL    K   + + ++VF  + R+ + PD+   N +I+ +   G    
Sbjct: 467 -----NILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVED 521

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
             E++  +   G+ P+++ YNTM+  FC++G  +EA  LL +M+  G  PN  TYN LI 
Sbjct: 522 GWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIR 581

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHS 315
              R+G+ E +  LI++M   G    A +
Sbjct: 582 ARLRDGDREASAELIKEMRSCGFAGDAST 610


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  285 bits (728), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 161/504 (31%), Positives = 261/504 (51%), Gaps = 5/504 (0%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P  K+ + ++++L        A  V+  M   G+ P++ T+  ++ + C   E+  A  L
Sbjct: 181 PTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSL 240

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           L +M   GC PN + Y  LI   S+  ++ +A  L+ +M  +G      ++N +I G  +
Sbjct: 241 LRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCK 300

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
              + +A  L + M+ RG  P   TY  L++GLC+ G++++AR    ++L K   P+   
Sbjct: 301 VNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEAR----KILIKIPCPNNAI 356

Query: 386 YNTLLYGYCRSGNIGEAFLLFDE-LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
            NTL+ GY  SG + EA    +E + +    P + TYN L+ GLC+ G L  A+ L   M
Sbjct: 357 LNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEM 416

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
             +G  P+VITY I+VNG CK G L  A    +EM  +GL  +   Y   I    +    
Sbjct: 417 SRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKV 476

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
             A  L  EM  KG  PDL TYN L++GLCK+  ++EA  L   M+ DG + +++TY ++
Sbjct: 477 HVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTL 536

Query: 565 IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
           IHA L  G  ++   L N+ML +G +   +TY  LI A    G +E     + +M + G+
Sbjct: 537 IHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGL 596

Query: 625 RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
             + I+ N +INGLC++ ++D A+    D    G +P+  TY  ++N  C  G  +EAL 
Sbjct: 597 GADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALN 656

Query: 685 LYKEMLDREIEPDYCTHSALLLKQ 708
           L+  +    + PD  T++  +  Q
Sbjct: 657 LFDRLQVEGVRPDAFTYNTFISWQ 680



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 153/483 (31%), Positives = 249/483 (51%), Gaps = 5/483 (1%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V+    +   M ++G +P+      +I  L       +A ++   M   G  P + T+N 
Sbjct: 234 VDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFND 293

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++   CK  ++ +A +L+  M  RG  P+ +TY  L+ G  R G+L +AR +   ++K+ 
Sbjct: 294 VIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKI---LIKIP 350

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALN-LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
              +A   N +I GY   G L EA + L E M+  G  P + TYNIL++GLCK G +S A
Sbjct: 351 CPNNA-ILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFA 409

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
           R    EM R+   P++I+Y  L+ G C++G + EA L+  E+ +R L    V YN LI  
Sbjct: 410 RDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICA 469

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           LCR   + VA  L   M  +G  PD+ TY  ++ G CK+  +  A   F+ ML  G   +
Sbjct: 470 LCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVAN 529

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              Y T I   L+ G   +A  L  +ML +G   D ITYN L+   CK+G++E+  EL  
Sbjct: 530 NVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYE 589

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
           +M+ DG   D I+   +I+   ++G +    +   + + +G  P +VTY  +++     G
Sbjct: 590 QMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVG 649

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
           R++ A   F  +QV+G+RP+  TYN  I+  C+   ++ A   F    E G +P+  T+ 
Sbjct: 650 RIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWN 709

Query: 668 ILI 670
           +L+
Sbjct: 710 VLV 712



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 121/340 (35%), Positives = 187/340 (55%)

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M  FG +P I TYN ++   CKEG +  A +L+ EM  RGC PN +TY +L+ G  + G 
Sbjct: 381 MINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGL 440

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           LE+A  ++ +M   GL +++  YN +IC    K  +  ALNL  EM T+G  P L TYN 
Sbjct: 441 LEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNS 500

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           LIYGLCK  R+ +A   F  ML    + + ++YNTL++   R G   +A  L +++  R 
Sbjct: 501 LIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRG 560

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
                +TYN LI   C+ G++E   +L E MI  G+  D I+  IM+NG CK+G +  A 
Sbjct: 561 CTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAF 620

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
           EF  + + +G  PD   Y + + G  K+G   EA  L + +  +G  PD  TYN  +   
Sbjct: 621 EFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQ 680

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           CK G + +A     + + +GF+P ++T+  +++  L+  +
Sbjct: 681 CKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSN 720



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 141/469 (30%), Positives = 225/469 (47%), Gaps = 34/469 (7%)

Query: 184 TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEFGIKPS 242
           ++K+ V + L +  +M   G +PDV+  N +I  L + N      + V RM+   G  P 
Sbjct: 264 SQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLR-GFYPD 322

Query: 243 IVTYNTMLDSFCKEGEMQEALELL-----------------WEMQGR------------- 272
            +TY  +L   C+ G++ EA ++L                 + M G+             
Sbjct: 323 NMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMI 382

Query: 273 --GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLV 330
             G  P+  TYN+L+ G  + G L  AR L+ +M + G + +  +Y  ++ G  + GLL 
Sbjct: 383 NFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLE 442

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
           EA  +  EM  RG+      YN LI  LC+  +V  A +   EM  K   PD+ +YN+L+
Sbjct: 443 EAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLI 502

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
           YG C+   I EAF LF  +     V   VTYNTLI  L R G  + A  L  +M+ +G  
Sbjct: 503 YGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCT 562

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
            D ITY  ++   CK+GN+    E + +M+  GL  D  +    I G  K+G    A+  
Sbjct: 563 LDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEF 622

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
             + + +GF PD++TYN +++GLCK+G ++EA  L  ++  +G  PD  TY + I    +
Sbjct: 623 LRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCK 682

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
            G +      F   +  G  P+ +T+ VL++    +   E  F    E+
Sbjct: 683 EGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 181/397 (45%), Gaps = 33/397 (8%)

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
           +G   T   Y + I  L   G+         +M  + ++     +  ++  Y ++G  G+
Sbjct: 106 KGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQ 165

Query: 402 AFLLFDELRSRNLV-PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           A  L  ++R+  L  PT  +Y+ +++ L      +VA  +  +M+++G+ P V T+ I++
Sbjct: 166 AIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVM 225

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
              C    +  A     +M + G  P+   Y T I    +    SEA +L EEM   G  
Sbjct: 226 KALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCM 285

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           PD+ T+N ++HGLCK+  + +A +L+ +M+  GF PD++TY  ++H    +G L   R +
Sbjct: 286 PDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKI 345

Query: 581 F------NN--------------------------MLRKGLSPTLVTYTVLIHAHAARGR 608
                  NN                          M+  G  P + TY +L+H     G 
Sbjct: 346 LIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGS 405

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           L  A    +EM  +G  PNVITY  L+NGLC+   +++A  +  +M   G+  N   Y  
Sbjct: 406 LSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNC 465

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           LI   C       AL L  EM  +  +PD  T+++L+
Sbjct: 466 LICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLI 502


>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
 gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  285 bits (728), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 198/700 (28%), Positives = 333/700 (47%), Gaps = 92/700 (13%)

Query: 99  RIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMH-- 156
           R +  P+ AL FFR              +C ++ +L+++ LL +A  V+  ++  N+   
Sbjct: 101 RSKVNPKTALDFFRLASDSFSFSFSLRSYCLLIGLLLDANLLSAARVVLIRLINGNVPVL 160

Query: 157 --GILDVLIG-----GGLSSC----VSIKILDLLLLIYTKKSMVEQCLL---VFNKMLRN 202
             G+ D  +        LS C    +  K+ DLL+ +Y  +   + C L   VF  +   
Sbjct: 161 PCGLRDSRVAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANK 220

Query: 203 GLLPDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQE 261
           G+ P    CN ++  L R N F  K  E + ++ + G+ P +  + T +++FCK G+++E
Sbjct: 221 GMFPSKTTCNILLTSLVRANEFQ-KCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEE 278

Query: 262 ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA---------RGL------------ 300
           A++L  +M+  G +PN VT+N +I G    G  ++A         RG+            
Sbjct: 279 AVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVK 338

Query: 301 --------------IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
                         +++M K G   +   YN +I  + E G L +A+ +++ MV++G++ 
Sbjct: 339 GLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSL 398

Query: 347 TLATYNILIYGLCKWGRVSDAR---------------------------HRFF------- 372
           T +TYN LI G CK G+  +A                            H  F       
Sbjct: 399 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFV 458

Query: 373 -EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY 431
            EML +N+ P      TL+ G C+ G   +A  L+ +  ++  V    T N L+ GLC  
Sbjct: 459 GEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEA 518

Query: 432 GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAY 491
           G L+ A ++++ ++ +G + D ++Y  +++G C    L  A  F +EM+++GL+PD + Y
Sbjct: 519 GKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 578

Query: 492 TTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
           +  I G   +    EA +  ++    G  PD+ TY+V++ G CK    EE  E   +M+ 
Sbjct: 579 SILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMS 638

Query: 552 DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLEL 611
               P+ + Y  +I A    G L    +L  +M  KG+SP   TYT LI   +   R+E 
Sbjct: 639 KNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEE 698

Query: 612 AFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
           A + F EM+++G+ PNV  Y ALI+G  +L ++ +   L  +M  + + PNK TYT++I 
Sbjct: 699 AKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIG 758

Query: 672 ENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL---LKQ 708
                GN  EA RL  EM ++ I PD  T+   +   LKQ
Sbjct: 759 GYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQ 798



 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 166/537 (30%), Positives = 255/537 (47%), Gaps = 35/537 (6%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL-----RDNGFSVKAREVYR----- 232
           + K   VE+ + +F+KM   G+ P+V   N +I  L      D  F  K + V R     
Sbjct: 270 FCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPT 329

Query: 233 -------------------------MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLW 267
                                     M + G  P+++ YN ++DSF + G + +A+E+  
Sbjct: 330 LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKD 389

Query: 268 EMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKG 327
            M  +G S    TYN LI G+ +NG+ + A  L+++ML +G  V+  S+  +IC      
Sbjct: 390 LMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHL 449

Query: 328 LLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYN 387
           +   AL    EM+ R ++P       LI GLCK G+ S A   +F+ L K  + D  + N
Sbjct: 450 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 509

Query: 388 TLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
            LL+G C +G + EAF +  E+  R  V   V+YNTLI G C    L+ A    + M+ +
Sbjct: 510 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 569

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
           G+ PD  TY+I++ G   M  +  A +F+++  R G+ PD + Y+  I G  K   T E 
Sbjct: 570 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 629

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
               +EM++K   P+ + YN L+   C+ G L  A EL   M   G  P+  TYTS+I  
Sbjct: 630 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 689

Query: 568 SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
              +  +   + LF  M  +GL P +  YT LI  +   G++        EM  K + PN
Sbjct: 690 MSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 749

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
            ITY  +I G  R   + +A  L  +M E+GI+P+  TY   I      G   EA +
Sbjct: 750 KITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 191/389 (49%), Gaps = 1/389 (0%)

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
           AL++   +  +G+ P+  T NIL+  L +          F +++ K V PD+  + T + 
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAIN 268

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
            +C+ G + EA  LF ++    + P VVT+NT+IDGL   G  + A   KE M+ +G+ P
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
            +ITY+I+V G  +   +  A     EM +KG  P+   Y   I   ++ G  ++A  ++
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
           + M++KG      TYN L+ G CK G  + A  LL++M+  GF  +  ++TS+I      
Sbjct: 389 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 448

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
                       ML + +SP     T LI      G+   A   + +   KG   +  T 
Sbjct: 449 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 508

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           NAL++GLC   ++D+A+ +  ++   G + ++ +Y  LI+  C      EA     EM+ 
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568

Query: 692 REIEPDYCTHSALLLKQLDKDYKVHAVEY 720
           R ++PD  T+S L+    + +    A+++
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQF 597



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 171/361 (47%), Gaps = 35/361 (9%)

Query: 188 MVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
           M +  L    +ML   + P       +I  L  +G   KA E++      G      T N
Sbjct: 450 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 509

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
            +L   C+ G++ EA  +  E+ GRGC  + V+YN LI+G     +L++A   + +M+K 
Sbjct: 510 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 569

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           GLK   ++Y+ +ICG      + EA+   ++    G+ P + TY+++I G CK  R  + 
Sbjct: 570 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 629

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG--------------------------- 400
           +  F EM+ KNV P+ + YN L+  YCRSG +                            
Sbjct: 630 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 689

Query: 401 --------EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
                   EA LLF+E+R   L P V  Y  LIDG  + G +   + L   M ++ + P+
Sbjct: 690 MSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 749

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
            ITYT+M+ G  + GN++ A    NEM  KG+ PD   Y   I G LK G   EA++  +
Sbjct: 750 KITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSD 809

Query: 513 E 513
           E
Sbjct: 810 E 810


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  285 bits (728), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 160/505 (31%), Positives = 268/505 (53%), Gaps = 2/505 (0%)

Query: 203 GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGI--KPSIVTYNTMLDSFCKEGEMQ 260
           G +PDV + N ++K L + G S +A ++ RMM E G    P +V YNT++D F KEG++ 
Sbjct: 179 GCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVN 238

Query: 261 EALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII 320
           +A +L  EM  RG  P+ VTY+ ++    +   +++A   +R M+  G+     +YN +I
Sbjct: 239 KACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLI 298

Query: 321 CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
            GYS  G   EA+ + +EM  + + P +   N L+  LCK+G++ +AR  F  M  K   
Sbjct: 299 YGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQN 358

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           PD+ SY  +L GY   G + +   LFD +    + P + T+N LI      G L+ A  +
Sbjct: 359 PDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMII 418

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
              M + G+ P V+TY  ++   C++G +  A E FN+M+ +G+ PD++AY   I G   
Sbjct: 419 FNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCT 478

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
            G   +A  L  E++  G   D++ +  +++ LCKLG + +A  +    V  G  PD + 
Sbjct: 479 HGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVV 538

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           Y  ++     +G + +   +F+ M+  G+ P +V Y  L++ +   GR++     F EM 
Sbjct: 539 YNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREML 598

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
            KGI+P+ I YN +I+GL    R   A   F +M E GI  NK TY+I++        + 
Sbjct: 599 QKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFD 658

Query: 681 EALRLYKEMLDREIEPDYCTHSALL 705
           EA+ L+KE+    ++ D  T + ++
Sbjct: 659 EAIFLFKELRAMNVKIDIITLNTMI 683



 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 164/531 (30%), Positives = 277/531 (52%), Gaps = 3/531 (0%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMGE 236
           +L+   T+    E  L  F ++LR GL  D    + ++K   +   + +A ++      E
Sbjct: 118 ILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPE 177

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQ--GRGCSPNGVTYNVLITGFSRNGEL 294
            G  P + +YN +L S C +G+  +A +LL  M   G  CSP+ V YN +I GF + G++
Sbjct: 178 LGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDV 237

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
            +A  L ++M++ G+     +Y+ ++    +   + +A     +MV +GV P   TYN L
Sbjct: 238 NKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNL 297

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           IYG    G+  +A   F EM R++++PD+++ NTL+   C+ G I EA  +FD +  +  
Sbjct: 298 IYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQ 357

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P V +Y  +++G    G L     L + M+  GI PD+ T+ +++      G L  A  
Sbjct: 358 NPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMI 417

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
            FNEM   G++P    Y T IA   ++G   +A     +M+ +G  PD   Y+ L+ G C
Sbjct: 418 IFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFC 477

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
             GSL +A EL+ +++ +G   D + + SII+   ++G +   +++F+  +  GL P  V
Sbjct: 478 THGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAV 537

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
            Y +L+  +   G++E A   F  M   GI PNV+ Y  L+NG C++ RID+   LF +M
Sbjct: 538 VYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREM 597

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            ++GI P+   Y I+I+    AG    A   + EM +  I  + CT+S +L
Sbjct: 598 LQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVL 648



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 143/503 (28%), Positives = 245/503 (48%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y+     ++ + VF +M R  +LPDV   N ++  L   G   +AR+V+  M   G  P 
Sbjct: 301 YSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPD 360

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           + +Y  ML+ +  +G + +  +L   M G G +P+  T+NVLI  ++  G L++A  +  
Sbjct: 361 VFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFN 420

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M   G+K    +Y  +I      G + +A+    +M+ +GV P    Y+ LI G C  G
Sbjct: 421 EMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHG 480

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            +  A+    E++   +  DI+ + +++   C+ G + +A  +FD   +  L P  V YN
Sbjct: 481 SLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYN 540

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            L+DG C  G +E A ++ + M++ GI P+V+ Y  +VNG CK+G +      F EML+K
Sbjct: 541 MLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQK 600

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G++P    Y   I G  + G T  A     EM   G   +  TY++++ GL K    +EA
Sbjct: 601 GIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEA 660

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             L +++       D IT  ++I    +   +   +DLF ++ R GL P  VTY+++I  
Sbjct: 661 IFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITN 720

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
               G +E A   FS MQ  G  P+    N ++  L +   I +A      ++E      
Sbjct: 721 LLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLE 780

Query: 663 KYTYTILINENCNAGNWQEALRL 685
             T  +L++   + G  +E +R 
Sbjct: 781 HLTAMLLVDLFSSKGTCREQIRF 803



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 135/475 (28%), Positives = 224/475 (47%), Gaps = 39/475 (8%)

Query: 270 QG-RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
           QG R  SP   TY +L+   +R    E A      +L+ GL+V A   + ++ G+ E   
Sbjct: 104 QGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKR 163

Query: 329 LVEALN-LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI--PDIIS 385
             EAL+ L       G  P + +YNIL+  LC  G+   A      M     +  PD+++
Sbjct: 164 TDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVA 223

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           YNT++ G+ + G++ +A  LF E+  R + P +VTY++++  LC+   ++ A+     M+
Sbjct: 224 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMV 283

Query: 446 NQGILPDVITYTIMVNGS-----------------------------------CKMGNLS 470
           N+G+LPD  TY  ++ G                                    CK G + 
Sbjct: 284 NKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIK 343

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            AR+ F+ M  KG  PD F+YT  + G    G   +   L + ML  G  PD+ T+NVL+
Sbjct: 344 EARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLI 403

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
                 G L++A  +  +M   G  P  +TY ++I A   +G +    + FN M+ +G+ 
Sbjct: 404 KAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVV 463

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           P    Y  LI      G L  A    SE+   G+R +++ + ++IN LC+L R+  A  +
Sbjct: 464 PDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNI 523

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           F      G+ P+   Y +L++  C  G  ++ALR++  M+   IEP+   +  L+
Sbjct: 524 FDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLV 578


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  285 bits (728), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 168/531 (31%), Positives = 269/531 (50%), Gaps = 4/531 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V+++M   G+ PDV   N ++K L        A  +   M   G+ P   T+ T++  F 
Sbjct: 168 VYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFV 227

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           +EG ++ AL +   M   GCS   VT NVLI G+ + G +E A G I+  +  G +    
Sbjct: 228 EEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQI 287

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +YN  + G  +   +  AL + + MV  G  P + TYNI++  LCK G++ +A+    +M
Sbjct: 288 TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 347

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           + +  +PDI ++NTL+   C    + EA  L  ++  + + P V T+N LI+ LC+ GD 
Sbjct: 348 VDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDP 407

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
            +A +L E M N G  PD +TY  +++  C +G L  A +   +M   G       Y T 
Sbjct: 408 HLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTI 467

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I G  K     EA  + ++M  +G   + IT+N L+ GLCK   +++A EL+ +M+ +G 
Sbjct: 468 IDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGL 527

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            P++ITY SI+    + GD+++  D+   M   G    +VTY  LI+     GR ++A  
Sbjct: 528 QPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALK 587

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
               M++KG+RP    YN ++  L R   I  A  LF +M E G  P+  TY I+    C
Sbjct: 588 VLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLC 647

Query: 675 NAGN-WQEALRLYKEMLDREIEPDYCTHSAL---LLKQLDKDYKVHAVEYL 721
             G   +EA     EM+D+   P++ +   L   LL     DY + A+E +
Sbjct: 648 RGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEII 698



 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 144/469 (30%), Positives = 240/469 (51%)

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
           FGI+   V YN +L+   +  +M+    +  EM  RG  P+ VT+N L+    R  ++  
Sbjct: 140 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 199

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  ++ +M   G+     ++  ++ G+ E+G +  AL ++  M+  G + T  T N+LI 
Sbjct: 200 AVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 259

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           G CK GRV DA     + +     PD I+YNT + G C++ ++G A  + D +      P
Sbjct: 260 GYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 319

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
            V TYN +++ LC+ G LE A+ +   M+++G LPD+ T+  ++   C    L  A +  
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 379

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
            ++  KG+ PD + +   I    K+GD   A RL EEM   G  PD +TYN L+  LC L
Sbjct: 380 RQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSL 439

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G L +A +LL+ M   G     ITY +II    +   +    ++F+ M  +G+S   +T+
Sbjct: 440 GKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF 499

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
             LI       +++ AF   ++M  +G++PN ITYN+++   C+   I +A  +   M  
Sbjct: 500 NTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTA 559

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            G   +  TY  LIN  C AG  Q AL++ + M  + + P    ++ +L
Sbjct: 560 NGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVL 608



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 131/488 (26%), Positives = 231/488 (47%), Gaps = 37/488 (7%)

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
           +P    Y  +I      G L+  + L+ +M + G +V     +  +  Y  + L  +A++
Sbjct: 71  APGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVD 130

Query: 335 L--EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
           L   +     G+      YN L+  L +  ++      + EM  + + PD++++NTL+  
Sbjct: 131 LILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKA 190

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
            CR+  +  A L+ +E+ SR + P   T+ TL+ G    G +E A ++K  M+  G    
Sbjct: 191 LCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSAT 250

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
            +T  +++NG CK+G +  A  +  + +  G +PD+  Y T + G  +      A ++ +
Sbjct: 251 KVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMD 310

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
            M+ +G  PD+ TYN++V+ LCK G LEEA  +L +MV  G +PD  T+ ++I A     
Sbjct: 311 VMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGN 370

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN----- 627
            L    DL   +  KG+SP + T+ +LI+A    G   LA   F EM+  G  P+     
Sbjct: 371 RLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYN 430

Query: 628 ------------------------------VITYNALINGLCRLRRIDQAYGLFIDMEEE 657
                                          ITYN +I+GLC+  RI++A  +F  M+ +
Sbjct: 431 TLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQ 490

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHA 717
           GI  N  T+  LI+  C      +A  L  +M+   ++P+  T++++L     +     A
Sbjct: 491 GISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKA 550

Query: 718 VEYLESLT 725
            + LE++T
Sbjct: 551 ADILETMT 558



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 143/485 (29%), Positives = 224/485 (46%), Gaps = 21/485 (4%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVV---CVNMHGILDVLIGGGLSSCVSIKI 175
           GV  DE  F T+++  +E G + +A  V   ++   C      ++VLI G          
Sbjct: 211 GVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING---------- 260

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
                  Y K   VE  L    + + +G  PD    N  +  L  N     A +V  +M 
Sbjct: 261 -------YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMV 313

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
           + G  P + TYN +++  CK G+++EA  +L +M  RGC P+  T+N LI        LE
Sbjct: 314 QEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLE 373

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
           +A  L R +   G+    +++N +I    + G    AL L EEM   G  P   TYN LI
Sbjct: 374 EALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLI 433

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
             LC  G++  A     +M         I+YNT++ G C+   I EA  +FD++  + + 
Sbjct: 434 DNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS 493

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
              +T+NTLIDGLC+   ++ A +L   MI++G+ P+ ITY  ++   CK G++  A + 
Sbjct: 494 RNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADI 553

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
              M   G + D   Y T I G  K G T  A ++   M  KG  P    YN ++  L +
Sbjct: 554 LETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFR 613

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD-LRRGRDLFNNMLRKGLSPTLV 594
             ++ +A  L R+M   G  PD +TY  +       G  ++   D    M+ KG  P   
Sbjct: 614 RNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFS 673

Query: 595 TYTVL 599
           ++ +L
Sbjct: 674 SFRML 678



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 192/393 (48%), Gaps = 43/393 (10%)

Query: 151 VCVNMH-----GILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLL 205
           +C N H      ++DV++  G      +   ++++    K   +E+   + N+M+  G L
Sbjct: 296 LCQNDHVGHALKVMDVMVQEGHDP--DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL 353

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           PD+   N +I  L       +A ++ R +   G+ P + T+N ++++ CK G+   AL L
Sbjct: 354 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRL 413

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
             EM+  GC+P+ VTYN LI      G+L +A  L++DM   G   S  +YN II G  +
Sbjct: 414 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 473

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
           K  + EA  + ++M  +G++    T+N LI GLCK  ++ DA     +M+ + + P+ I+
Sbjct: 474 KMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNIT 533

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           YN++L  YC+ G+I +A  + + + +      VVTY TLI+GLC+ G  +VA ++   M 
Sbjct: 534 YNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMR 593

Query: 446 NQGILP-----------------------------------DVITYTIMVNGSCKMGN-L 469
            +G+ P                                   D +TY I+  G C+ G  +
Sbjct: 594 IKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPI 653

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
             A +F  EM+ KG  P+  ++     G L LG
Sbjct: 654 KEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLG 686


>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
 gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
          Length = 1139

 Score =  284 bits (727), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 168/551 (30%), Positives = 273/551 (49%), Gaps = 34/551 (6%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +E  L + + M+R G +P   NC+ +I  LR      +A  +   +G+ G+ P++  YN 
Sbjct: 284 LEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNA 343

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++D  CK     +A  L  EM GRG  PN VTY +LI    + G +E A  L   M   G
Sbjct: 344 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 403

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           +KV+ + YN +I GY ++G L  A  L   MV  G+ PT A+Y+ LI GLC+ G +S   
Sbjct: 404 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCM 463

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               EM  + +  +  ++  L+ G+C+   + EA  LFD++   N++P  VT+N +I+G 
Sbjct: 464 ELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY 523

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C  G++  A QL + M+  G+ PD  TY  +++G C    +S A EF  ++       + 
Sbjct: 524 CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNN 583

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
           F+ T  + G  + G  +E Y L +EM  +G   DL+++ ++V+   K    E++  L R+
Sbjct: 584 FSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFRE 643

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M   G  PD I YT +I A  +  ++ +  + ++ M+  G SP  VT+TVLI+     G 
Sbjct: 644 MKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGY 703

Query: 609 LELAFMYFSEMQVKGIRPNVITYNA----------------------------------L 634
           L  A +   EM    + PN  TYN                                   L
Sbjct: 704 LGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNIL 763

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           I GLC+  +I +A  L   + E G  P+  +Y+ +I+E C  G+  +A  L+ EML + +
Sbjct: 764 IKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGL 823

Query: 695 EPDYCTHSALL 705
           +PD   ++  +
Sbjct: 824 KPDVVAYNIFI 834



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 148/539 (27%), Positives = 274/539 (50%), Gaps = 16/539 (2%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           A R F+ +  + G++ +E  +  ++  L + G+       +E  +C     + D +   G
Sbjct: 357 ADRLFKEMAGR-GLEPNEVTYAILIHALCKRGM-------IEDALC-----LFDKMRDKG 403

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
           +   V++   + L+  Y K+  +++   + + M++ GL P   + + +I  L  NG    
Sbjct: 404 IK--VTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSS 461

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
             E++R M E GI  +  T+  +++ FCK+ +M EA  L  +M      PN VT+NV+I 
Sbjct: 462 CMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIE 521

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G+   G + +A  L   M+++GLK   ++Y  +I G      + +A     ++       
Sbjct: 522 GYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVL 581

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
              +   L+YG  + GR ++  H + EM  + V  D++S+  ++Y   +  +  ++ +LF
Sbjct: 582 NNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLF 641

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
            E++ + + P  + Y  +ID L +  ++  A    + M+  G  P+ +T+T+++N  CK 
Sbjct: 642 REMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKS 701

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G L  A     EML   + P++F Y   +      GD  +A  L   ML +G    ++++
Sbjct: 702 GYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSF 760

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           N+L+ GLCK G ++EA +L+ K+   GF PD I+Y++IIH   +MGD+ +  +L+N ML 
Sbjct: 761 NILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLY 820

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
           KGL P +V Y + I      G  + A   ++ M   G++PN  TY AL++G+  +   D
Sbjct: 821 KGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMLHYD 879



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 133/514 (25%), Positives = 244/514 (47%), Gaps = 35/514 (6%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           AR+++  M + G+      Y   + ++C+   +  A  L+  M+  G   + V YNVL+ 
Sbjct: 182 ARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMY 241

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G  +N  +++A  +   M+ +G+     +Y  ++ G+     L  AL +  +M+  G  P
Sbjct: 242 GLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVP 301

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
           + A  + +I  L K   V +A     ++    ++P++ +YN L+   C++    +A  LF
Sbjct: 302 SEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLF 361

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
            E+  R L P  VTY  LI  LC+ G +E A  L + M ++GI   V  Y  ++NG CK 
Sbjct: 362 KEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQ 421

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G+L  AR   + M+++GL P   +Y+  IAG  + GD S    L  EM  +G   +  T+
Sbjct: 422 GSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTF 481

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
             L++G CK   ++EA  L  KM+    IP+ +T+  +I     +G++R+   L++ M+ 
Sbjct: 482 TALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVE 541

Query: 587 KGLSPTLVTY-----------------------------------TVLIHAHAARGRLEL 611
            GL P   TY                                   T L++     GR   
Sbjct: 542 MGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTE 601

Query: 612 AFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
            +  + EM V+G++ +++++  ++    +    +++  LF +M+E+G+ P+   YT +I+
Sbjct: 602 TYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMID 661

Query: 672 ENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
                 N  +AL  + +M+     P+  TH+ L+
Sbjct: 662 ALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLI 695



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 35/226 (15%)

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
           L+ G   +  T + ++  L K+     A +L  KM+  G   D   YT+ I A  E  +L
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
              R L   M  +G+  + V Y VL++      R++ A    + M   G+  + +TY  L
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 635 INGLCRLRR-----------------------------------IDQAYGLFIDMEEEGI 659
           + G CR+                                     +++A+ L   + + G+
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 660 LPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +PN + Y  LI++ C    + +A RL+KEM  R +EP+  T++ L+
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILI 380


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 168/531 (31%), Positives = 269/531 (50%), Gaps = 4/531 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V+++M   G+ PDV   N ++K L        A  +   M   G+ P   T+ T++  F 
Sbjct: 168 VYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFV 227

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           +EG ++ AL +   M   GCS   VT NVLI G+ + G +E A G I+  +  G +    
Sbjct: 228 EEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQI 287

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +YN  + G  +   +  AL + + MV  G  P + TYNI++  LCK G++ +A+    +M
Sbjct: 288 TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 347

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           + +  +PDI ++NTL+   C    + EA  L  ++  + + P V T+N LI+ LC+ GD 
Sbjct: 348 VDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDP 407

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
            +A +L E M N G  PD +TY  +++  C +G L  A +   +M   G       Y T 
Sbjct: 408 HLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTI 467

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I G  K     EA  + ++M  +G   + IT+N L+ GLCK   +++A EL+ +M+ +G 
Sbjct: 468 IDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGL 527

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            P++ITY SI+    + GD+++  D+   M   G    +VTY  LI+     GR ++A  
Sbjct: 528 QPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALK 587

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
               M++KG+RP    YN ++  L R   I  A  LF +M E G  P+  TY I+    C
Sbjct: 588 VLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLC 647

Query: 675 NAGN-WQEALRLYKEMLDREIEPDYCTHSAL---LLKQLDKDYKVHAVEYL 721
             G   +EA     EM+D+   P++ +   L   LL     DY + A+E +
Sbjct: 648 RGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEII 698



 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 144/469 (30%), Positives = 240/469 (51%)

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
           FGI+   V YN +L+   +  +M+    +  EM  RG  P+ VT+N L+    R  ++  
Sbjct: 140 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 199

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  ++ +M   G+     ++  ++ G+ E+G +  AL ++  M+  G + T  T N+LI 
Sbjct: 200 AVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 259

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           G CK GRV DA     + +     PD I+YNT + G C++ ++G A  + D +      P
Sbjct: 260 GYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 319

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
            V TYN +++ LC+ G LE A+ +   M+++G LPD+ T+  ++   C    L  A +  
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 379

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
            ++  KG+ PD + +   I    K+GD   A RL EEM   G  PD +TYN L+  LC L
Sbjct: 380 RQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSL 439

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G L +A +LL+ M   G     ITY +II    +   +    ++F+ M  +G+S   +T+
Sbjct: 440 GKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF 499

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
             LI       +++ AF   ++M  +G++PN ITYN+++   C+   I +A  +   M  
Sbjct: 500 NTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTA 559

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            G   +  TY  LIN  C AG  Q AL++ + M  + + P    ++ +L
Sbjct: 560 NGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVL 608



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 130/488 (26%), Positives = 231/488 (47%), Gaps = 37/488 (7%)

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
           +P    Y  +I      G L+  + L+ +M + G +V     +  +  Y  + L  +A++
Sbjct: 71  APGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVD 130

Query: 335 L--EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
           L   +     G+      YN L+  L +  ++      + EM  + + PD++++NTL+  
Sbjct: 131 LILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKA 190

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
            CR+  +  A ++ +E+ SR + P   T+ TL+ G    G +E A ++K  M+  G    
Sbjct: 191 LCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSAT 250

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
            +T  +++NG CK+G +  A  +  + +  G +PD+  Y T + G  +      A ++ +
Sbjct: 251 KVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMD 310

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
            M+ +G  PD+ TYN++V+ LCK G LEEA  +L +MV  G +PD  T+ ++I A     
Sbjct: 311 VMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGN 370

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN----- 627
            L    DL   +  KG+SP + T+ +LI+A    G   LA   F EM+  G  P+     
Sbjct: 371 RLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYN 430

Query: 628 ------------------------------VITYNALINGLCRLRRIDQAYGLFIDMEEE 657
                                          ITYN +I+GLC+  RI++A  +F  M+ +
Sbjct: 431 TLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQ 490

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHA 717
           GI  N  T+  LI+  C      +A  L  +M+   ++P+  T++++L     +     A
Sbjct: 491 GISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKA 550

Query: 718 VEYLESLT 725
            + LE++T
Sbjct: 551 ADILETMT 558



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 143/485 (29%), Positives = 224/485 (46%), Gaps = 21/485 (4%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVV---CVNMHGILDVLIGGGLSSCVSIKI 175
           GV  DE  F T+++  +E G + +A  V   ++   C      ++VLI G          
Sbjct: 211 GVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING---------- 260

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
                  Y K   VE  L    + + +G  PD    N  +  L  N     A +V  +M 
Sbjct: 261 -------YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMV 313

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
           + G  P + TYN +++  CK G+++EA  +L +M  RGC P+  T+N LI        LE
Sbjct: 314 QEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLE 373

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
           +A  L R +   G+    +++N +I    + G    AL L EEM   G  P   TYN LI
Sbjct: 374 EALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLI 433

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
             LC  G++  A     +M         I+YNT++ G C+   I EA  +FD++  + + 
Sbjct: 434 DNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS 493

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
              +T+NTLIDGLC+   ++ A +L   MI++G+ P+ ITY  ++   CK G++  A + 
Sbjct: 494 RNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADI 553

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
              M   G + D   Y T I G  K G T  A ++   M  KG  P    YN ++  L +
Sbjct: 554 LETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFR 613

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD-LRRGRDLFNNMLRKGLSPTLV 594
             ++ +A  L R+M   G  PD +TY  +       G  ++   D    M+ KG  P   
Sbjct: 614 RNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFS 673

Query: 595 TYTVL 599
           ++ +L
Sbjct: 674 SFRML 678



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 192/393 (48%), Gaps = 43/393 (10%)

Query: 151 VCVNMH-----GILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLL 205
           +C N H      ++DV++  G      +   ++++    K   +E+   + N+M+  G L
Sbjct: 296 LCQNDHVGHALKVMDVMVQEGHDP--DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL 353

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           PD+   N +I  L       +A ++ R +   G+ P + T+N ++++ CK G+   AL L
Sbjct: 354 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRL 413

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
             EM+  GC+P+ VTYN LI      G+L +A  L++DM   G   S  +YN II G  +
Sbjct: 414 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 473

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
           K  + EA  + ++M  +G++    T+N LI GLCK  ++ DA     +M+ + + P+ I+
Sbjct: 474 KMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNIT 533

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           YN++L  YC+ G+I +A  + + + +      VVTY TLI+GLC+ G  +VA ++   M 
Sbjct: 534 YNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMR 593

Query: 446 NQGILP-----------------------------------DVITYTIMVNGSCKMGN-L 469
            +G+ P                                   D +TY I+  G C+ G  +
Sbjct: 594 IKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPI 653

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
             A +F  EM+ KG  P+  ++     G L LG
Sbjct: 654 KEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLG 686


>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
 gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
          Length = 814

 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 198/700 (28%), Positives = 333/700 (47%), Gaps = 92/700 (13%)

Query: 99  RIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMH-- 156
           R +  P+ AL FFR              +C ++ +L+++ LL +A  V+  ++  N+   
Sbjct: 90  RSKVNPKTALDFFRLASDSFSFSFSLRSYCLLIGLLLDANLLSAARVVLIRLINGNVPVL 149

Query: 157 --GILDVLIG-----GGLSSC----VSIKILDLLLLIYTKKSMVEQCLL---VFNKMLRN 202
             G+ D  +        LS C    +  K+ DLL+ +Y  +   + C L   VF  +   
Sbjct: 150 PCGLRDSRVAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANK 209

Query: 203 GLLPDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQE 261
           G+ P    CN ++  L R N F  K  E + ++ + G+ P +  + T +++FCK G+++E
Sbjct: 210 GMFPSKTTCNILLTSLVRANEFQ-KCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEE 267

Query: 262 ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA---------RGL------------ 300
           A++L  +M+  G +PN VT+N +I G    G  ++A         RG+            
Sbjct: 268 AVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVK 327

Query: 301 --------------IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
                         +++M K G   +   YN +I  + E G L +A+ +++ MV++G++ 
Sbjct: 328 GLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSL 387

Query: 347 TLATYNILIYGLCKWGRVSDAR---------------------------HRFF------- 372
           T +TYN LI G CK G+  +A                            H  F       
Sbjct: 388 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFV 447

Query: 373 -EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY 431
            EML +N+ P      TL+ G C+ G   +A  L+ +  ++  V    T N L+ GLC  
Sbjct: 448 GEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEA 507

Query: 432 GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAY 491
           G L+ A ++++ ++ +G + D ++Y  +++G C    L  A  F +EM+++GL+PD + Y
Sbjct: 508 GKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 567

Query: 492 TTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
           +  I G   +    EA +  ++    G  PD+ TY+V++ G CK    EE  E   +M+ 
Sbjct: 568 SILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMS 627

Query: 552 DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLEL 611
               P+ + Y  +I A    G L    +L  +M  KG+SP   TYT LI   +   R+E 
Sbjct: 628 KNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEE 687

Query: 612 AFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
           A + F EM+++G+ PNV  Y ALI+G  +L ++ +   L  +M  + + PNK TYT++I 
Sbjct: 688 AKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIG 747

Query: 672 ENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL---LKQ 708
                GN  EA RL  EM ++ I PD  T+   +   LKQ
Sbjct: 748 GYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQ 787



 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 166/537 (30%), Positives = 255/537 (47%), Gaps = 35/537 (6%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLR-----DNGFSVKAREVYR----- 232
           + K   VE+ + +F+KM   G+ P+V   N +I  L      D  F  K + V R     
Sbjct: 259 FCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPT 318

Query: 233 -------------------------MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLW 267
                                     M + G  P+++ YN ++DSF + G + +A+E+  
Sbjct: 319 LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKD 378

Query: 268 EMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKG 327
            M  +G S    TYN LI G+ +NG+ + A  L+++ML +G  V+  S+  +IC      
Sbjct: 379 LMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHL 438

Query: 328 LLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYN 387
           +   AL    EM+ R ++P       LI GLCK G+ S A   +F+ L K  + D  + N
Sbjct: 439 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 498

Query: 388 TLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
            LL+G C +G + EAF +  E+  R  V   V+YNTLI G C    L+ A    + M+ +
Sbjct: 499 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 558

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
           G+ PD  TY+I++ G   M  +  A +F+++  R G+ PD + Y+  I G  K   T E 
Sbjct: 559 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 618

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
               +EM++K   P+ + YN L+   C+ G L  A EL   M   G  P+  TYTS+I  
Sbjct: 619 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 678

Query: 568 SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
              +  +   + LF  M  +GL P +  YT LI  +   G++        EM  K + PN
Sbjct: 679 MSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 738

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
            ITY  +I G  R   + +A  L  +M E+GI+P+  TY   I      G   EA +
Sbjct: 739 KITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 795



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 191/389 (49%), Gaps = 1/389 (0%)

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
           AL++   +  +G+ P+  T NIL+  L +          F +++ K V PD+  + T + 
Sbjct: 199 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAIN 257

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
            +C+ G + EA  LF ++    + P VVT+NT+IDGL   G  + A   KE M+ +G+ P
Sbjct: 258 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 317

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
            +ITY+I+V G  +   +  A     EM +KG  P+   Y   I   ++ G  ++A  ++
Sbjct: 318 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 377

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
           + M++KG      TYN L+ G CK G  + A  LL++M+  GF  +  ++TS+I      
Sbjct: 378 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 437

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
                       ML + +SP     T LI      G+   A   + +   KG   +  T 
Sbjct: 438 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 497

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           NAL++GLC   ++D+A+ +  ++   G + ++ +Y  LI+  C      EA     EM+ 
Sbjct: 498 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 557

Query: 692 REIEPDYCTHSALLLKQLDKDYKVHAVEY 720
           R ++PD  T+S L+    + +    A+++
Sbjct: 558 RGLKPDNYTYSILICGLFNMNKVEEAIQF 586



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 171/361 (47%), Gaps = 35/361 (9%)

Query: 188 MVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
           M +  L    +ML   + P       +I  L  +G   KA E++      G      T N
Sbjct: 439 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 498

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
            +L   C+ G++ EA  +  E+ GRGC  + V+YN LI+G     +L++A   + +M+K 
Sbjct: 499 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 558

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           GLK   ++Y+ +ICG      + EA+   ++    G+ P + TY+++I G CK  R  + 
Sbjct: 559 GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEG 618

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG--------------------------- 400
           +  F EM+ KNV P+ + YN L+  YCRSG +                            
Sbjct: 619 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 678

Query: 401 --------EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
                   EA LLF+E+R   L P V  Y  LIDG  + G +   + L   M ++ + P+
Sbjct: 679 MSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 738

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
            ITYT+M+ G  + GN++ A    NEM  KG+ PD   Y   I G LK G   EA++  +
Sbjct: 739 KITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSD 798

Query: 513 E 513
           E
Sbjct: 799 E 799


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 156/468 (33%), Positives = 249/468 (53%), Gaps = 2/468 (0%)

Query: 239 IKPSIVTYNTMLDSFCKEGE--MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
           I+P + T   +++ FC         A  +L  M   G  PN VT++ L+ G S   ++  
Sbjct: 6   IRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIID 65

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  L  +M+K+G +    +Y+ II G  + G    A+ L ++M  +G  P +  Y+ +I 
Sbjct: 66  AVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIID 125

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
            LCK   +++A     EM+ + + P++++Y+++L+G+C  G   EA  LF ++  RN++P
Sbjct: 126 SLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMP 185

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
             VT+N L+DGL + G +  AQ + E MI +G+ P+V TY  +++G C    +  A++ F
Sbjct: 186 DTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLF 245

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           N M+RKG  P   +Y   I G  K G   EA  L  EM  K   PD +TY+ L+ G C+ 
Sbjct: 246 NIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQD 305

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G  ++A +LL +M   G +PD +TY+ ++    + G L    +L   M    + P +  Y
Sbjct: 306 GRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIY 365

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
           T+LI      G+LE A   FS + VKGI+P+V+TY  +I+GL +    ++A  LF DM  
Sbjct: 366 TILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAV 425

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
            G LPN  TY ++I      G+   A RL +EM+ R    D  T   L
Sbjct: 426 HGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQML 473



 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 153/443 (34%), Positives = 241/443 (54%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A  V   M + G++P+ VT++T+L+    + ++ +A++L  EM   G  P+ +TY+ +I 
Sbjct: 31  AFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIIN 90

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G  + G    A  L++ M + G K +   Y+ II    +  L+ EA+    EMV RG++P
Sbjct: 91  GLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISP 150

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
            + TY+ +++G C  GR ++A   F +M+ +NV+PD +++N L+ G  + G I EA  +F
Sbjct: 151 NVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVF 210

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
           + +  + + P V TYN L+DG C    ++ AQ+L   M+ +G  P V +Y I++ G CK 
Sbjct: 211 ETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKS 270

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G +  A+    EM  K L PD   Y+T + G  + G   +A +L EEM + G  PDL+TY
Sbjct: 271 GRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTY 330

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           ++++ GLCK G L+EA ELL+ M      P+   YT +I      G L   R+LF+N+  
Sbjct: 331 SIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFV 390

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
           KG+ P +VTYTV+I      G    A   F +M V G  PN  TYN +I G  R      
Sbjct: 391 KGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSN 450

Query: 647 AYGLFIDMEEEGILPNKYTYTIL 669
           A  L  +M   G   +  T+ +L
Sbjct: 451 AGRLIEEMVGRGFSADSSTFQML 473



 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 151/416 (36%), Positives = 234/416 (56%)

Query: 184 TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
           + K+ +   + +F++M++ G  PDV   + II  L   G +  A ++ + M E G KP++
Sbjct: 58  SSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNV 117

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           V Y+T++DS CK+  + EA+E L EM  RG SPN VTY+ ++ GF   G   +A  L + 
Sbjct: 118 VVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQ 177

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M++  +     ++N ++ G S++G+++EA  + E M+ +GV P + TYN L+ G C   +
Sbjct: 178 MVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQ 237

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           + +A+  F  M+RK   P + SYN L+ G+C+SG I EA  L  E+  + L P  VTY+T
Sbjct: 238 MDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYST 297

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           L+ G C+ G  + AQ+L E M + G+LPD++TY+I+++G CK G+L  A E    M    
Sbjct: 298 LMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESK 357

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           ++P+ F YT  I G    G    A  L   +  KG  PD++TY V++ GL K G   EA 
Sbjct: 358 IEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEAC 417

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           EL R M   G +P+  TY  II   L  GD      L   M+ +G S    T+ +L
Sbjct: 418 ELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQML 473



 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 234/464 (50%), Gaps = 4/464 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V   M + GL P+    + ++  L      + A +++  M + G +P ++TY+T+++  C
Sbjct: 34  VLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLC 93

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K G    A++LL +M+ +GC PN V Y+ +I    ++  + +A   + +M+  G+  +  
Sbjct: 94  KMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVV 153

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +Y+ I+ G+   G   EA +L ++MV R V P   T+NIL+ GL K G + +A+  F  M
Sbjct: 154 TYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETM 213

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           + K V P++ +YN L+ GYC    + EA  LF+ +  +   P+V +YN LI G C+ G +
Sbjct: 214 IEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRI 273

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A+ L   M ++ + PD +TY+ ++ G C+ G    A++   EM   GL PD   Y+  
Sbjct: 274 DEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIV 333

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           + G  K G   EA+ L + M      P++  Y +L+ G+C  G LE A EL   +   G 
Sbjct: 334 LDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGI 393

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            PD +TYT +I   L+ G      +LF +M   G  P   TY V+I      G    A  
Sbjct: 394 QPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGR 453

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
              EM  +G   +  T+  L +    L   D+   LF+    +G
Sbjct: 454 LIEEMVGRGFSADSSTFQMLSD----LESRDEIISLFMHGSSQG 493



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 111/349 (31%), Positives = 189/349 (54%), Gaps = 2/349 (0%)

Query: 378 NVIPDIISYNTLLYGYCRSGN--IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
           N+ PD+ +   L+  +C S +     AF +   +    L P  VT++TL++GL     + 
Sbjct: 5   NIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKII 64

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            A +L + M+  G  PDVITY+ ++NG CKMG+ +MA +   +M  KG +P+   Y+T I
Sbjct: 65  DAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTII 124

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
               K    +EA     EM+ +G  P+++TY+ ++HG C LG   EA  L ++MV    +
Sbjct: 125 DSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVM 184

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           PD +T+  ++    + G +   + +F  M+ KG+ P + TY  L+  + ++ +++ A   
Sbjct: 185 PDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKL 244

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
           F+ M  KG  P+V +YN LI G C+  RID+A GL  +M  + + P+  TY+ L+   C 
Sbjct: 245 FNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQ 304

Query: 676 AGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
            G  Q+A +L +EM    + PD  T+S +L     + +   A E L+++
Sbjct: 305 DGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAM 353



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 103/394 (26%), Positives = 188/394 (47%), Gaps = 34/394 (8%)

Query: 33  SVHTYPSISESNNKDSVLNPESESYYKELIISTVEEKPWAFCNNRWVSDHFQAVVSDPEL 92
           +V  Y +I +S  KD ++  E+  +  E++             NR +S +   VV+   +
Sbjct: 116 NVVVYSTIIDSLCKDKLIT-EAMEFLSEMV-------------NRGISPN---VVTYSSI 158

Query: 93  LVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVC 152
           L    N  R     +L F + VE    V  D   F  +++ L + G++  A  V ET   
Sbjct: 159 LHGFCNLGRSNEATSL-FKQMVERN--VMPDTVTFNILVDGLSKEGMILEAQCVFET--- 212

Query: 153 VNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCN 212
                    +I  G+    ++   + L+  Y  +S +++   +FN M+R G  P V++ N
Sbjct: 213 ---------MIEKGVEP--NVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYN 261

Query: 213 RIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR 272
            +IK    +G   +A+ +   M    + P  VTY+T++  FC++G  Q+A +LL EM+  
Sbjct: 262 ILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSY 321

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA 332
           G  P+ +TY++++ G  + G L++A  L++ M +  ++ +   Y  +I G    G L  A
Sbjct: 322 GLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAA 381

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
             L   +  +G+ P + TY ++I GL K G  ++A   F +M     +P+  +YN ++ G
Sbjct: 382 RELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQG 441

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
           + R+G+   A  L +E+  R       T+  L D
Sbjct: 442 FLRNGDTSNAGRLIEEMVGRGFSADSSTFQMLSD 475



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 2/89 (2%)

Query: 619 MQVKGIRPNVITYNALINGLCRLR--RIDQAYGLFIDMEEEGILPNKYTYTILINENCNA 676
           M +  IRP+V T   LIN  C         A+ +  +M + G+ PN  T++ L+N   + 
Sbjct: 1   MDLSNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSK 60

Query: 677 GNWQEALRLYKEMLDREIEPDYCTHSALL 705
               +A++L+ EM+    EPD  T+S ++
Sbjct: 61  AKIIDAVKLFDEMVKMGYEPDVITYSTII 89


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 184/595 (30%), Positives = 286/595 (48%), Gaps = 38/595 (6%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G + D   F T++  L   G +  A  +V+ +V +     L  L       C++ K+ D 
Sbjct: 137 GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA 196

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           +LLI              ++M+  G  P+      ++KV+  +G +  A E+ R M E  
Sbjct: 197 VLLI--------------DRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERK 242

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           IK   V Y+ ++D  CK+G +  A  L  EM+ +G   + + Y  LI GF   G  +   
Sbjct: 243 IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGA 302

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L+RDM+K  +     +++ +I  + ++G L EA  L +EM+ RG++P   TY  LI G 
Sbjct: 303 KLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGF 362

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           CK  ++  A H    M+ K   P+I ++N L+ GYC++  I +   LF ++  R +V   
Sbjct: 363 CKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADT 422

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           VTYNTLI G C  G LEVA++L + M+++ + PD+++Y I+++G C  G    A E F +
Sbjct: 423 VTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEK 482

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           + +  ++ D   Y   I G        +A+ L   +  KG  PD+ TYN+++ GLCK GS
Sbjct: 483 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGS 542

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD----------------------LRR 576
           L EA+ L RKM  DG  P+  TY  +I A L  GD                      LR 
Sbjct: 543 LSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRF 602

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLEL--AFMYFSEMQVKGIRPNVITYNAL 634
                  ML+ G  P + T+T L+          +  A   F  M+  G +PNV+TYN +
Sbjct: 603 ALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTV 662

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           I GL     I Q  G+   M E G  PN  T +  I+  C       A+ L ++M
Sbjct: 663 IKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKM 717



 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 146/454 (32%), Positives = 241/454 (53%)

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
           + G +P  VT++T+++  C EG + EALEL+  M   G  P  +T N L+ G   NG++ 
Sbjct: 135 KLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVS 194

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
            A  LI  M++ G + +  +Y P++    + G    A+ L  +M  R +      Y+I+I
Sbjct: 195 DAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIII 254

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
            GLCK G + +A + F EM  K    DII Y TL+ G+C +G   +   L  ++  R + 
Sbjct: 255 DGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKIT 314

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P VV ++ LID   + G L  A++L + MI +GI PD +TYT +++G CK   L  A   
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM 374

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
            + M+ KG  P+   +   I G  K     +   L  +M  +G   D +TYN L+ G C+
Sbjct: 375 LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 434

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
           LG LE A EL ++MV     PD ++Y  ++    + G+  +  ++F  + +  +   +  
Sbjct: 435 LGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGI 494

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           Y ++IH      +++ A+  F  + +KG++P+V TYN +I GLC+   + +A  LF  ME
Sbjct: 495 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME 554

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           E+G  PN  TY ILI  +   G+  ++ +L +E+
Sbjct: 555 EDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI 588



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 143/530 (26%), Positives = 276/530 (52%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F +M R+   P + + +R+  V+          ++ + M   GI  ++ T + M++  C
Sbjct: 59  LFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCC 118

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           +  ++  A   + ++   G  P+ VT++ LI G    G + +A  L+  M+++G K +  
Sbjct: 119 RCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLI 178

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           + N ++ G    G + +A+ L + MV  G  P   TY  ++  +CK G+ + A     +M
Sbjct: 179 TLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKM 238

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
             + +  D + Y+ ++ G C+ G++  AF LF+E+  +     ++ Y TLI G C  G  
Sbjct: 239 EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           +   +L  +MI + I PDV+ ++ +++   K G L  A E   EM+++G+ PD   YT+ 
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I G  K     +A  + + M++KG  P++ T+N+L++G CK   +++  EL RKM   G 
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
           + D +TY ++I    E+G L   ++LF  M+ + + P +V+Y +L+      G  E A  
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F +++   +  ++  YN +I+G+C   ++D A+ LF  +  +G+ P+  TY I+I   C
Sbjct: 479 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLC 538

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
             G+  EA  L+++M +    P+ CT++ L+   L +     + + +E +
Sbjct: 539 KKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI 588



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 185/413 (44%), Gaps = 59/413 (14%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           M++  + PDV   + +I      G   +A E+++ M + GI P  VTY +++D FCKE +
Sbjct: 308 MIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQ 367

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           + +A  +L  M  +GC PN  T+N+LI G+ +   ++    L R M   G+     +YN 
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNT 427

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATY--------------------------- 351
           +I G+ E G L  A  L +EMV+R V P + +Y                           
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487

Query: 352 --------NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF 403
                   NI+I+G+C   +V DA   F  +  K V PD+ +YN ++ G C+ G++ EA 
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEAD 547

Query: 404 LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN-------------------- 443
           LLF ++      P   TYN LI      GD   + +L E                     
Sbjct: 548 LLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTL 607

Query: 444 --MINQGILPDVITYTIMVNGSCKMGNLSM--AREFFNEMLRKGLQPDRFAYTTQIAGEL 499
             M+  G  PDV T+T ++   C   N S+  A   F  M   G +P+   Y T I G L
Sbjct: 608 ARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLL 667

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
                S+   + ++M  +G  P+ +T +  + GLCK      A  LLRKM  D
Sbjct: 668 NGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKMEND 720



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 160/316 (50%), Gaps = 5/316 (1%)

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           +A  LF E+      P ++ ++ L   + R    ++   L + M  +GI  ++ T +IM+
Sbjct: 55  DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
           N  C+   LS+A     ++++ G +PD   ++T I G    G  SEA  L + M+  G  
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           P LIT N LV+GLC  G + +A  L+ +MV  GF P+ +TY  ++    + G      +L
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
              M  + +    V Y+++I      G L+ AF  F+EM++KG + ++I Y  LI G C 
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
             R D    L  DM +  I P+   ++ LI+     G  +EA  L+KEM+ R I PD  T
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT 354

Query: 701 HSALL-----LKQLDK 711
           +++L+       QLDK
Sbjct: 355 YTSLIDGFCKENQLDK 370



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 168/376 (44%), Gaps = 35/376 (9%)

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            DA   F EM R    P +I ++ L     R+        L  ++  + +   + T + +
Sbjct: 54  DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           I+  CR   L +A      +I  G  PD +T++ ++NG C  G +S A E  + M+  G 
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP----------------------- 521
           +P        + G    G  S+A  L + M+  GF P                       
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233

Query: 522 ------------DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
                       D + Y++++ GLCK GSL+ A  L  +M   GF  D I YT++I    
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
             G    G  L  +M+++ ++P +V ++ LI      G+L  A     EM  +GI P+ +
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           TY +LI+G C+  ++D+A  +   M  +G  PN  T+ ILIN  C A    + L L+++M
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413

Query: 690 LDREIEPDYCTHSALL 705
             R +  D  T++ L+
Sbjct: 414 SLRGVVADTVTYNTLI 429


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 160/523 (30%), Positives = 272/523 (52%), Gaps = 3/523 (0%)

Query: 186 KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG---IKPS 242
           K + E   ++  +M   G +P+V +CN ++K L +     +A E+   M E G     P+
Sbjct: 139 KRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPN 198

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +VTYNT++D  CK   +  A  +L  M  +G   + VTY+ +I G  +   +++A G+++
Sbjct: 199 VVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQ 258

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M+  G+K    +YN II G  +   +  A  + + M+ +GV P + TYN +I GLCK  
Sbjct: 259 HMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQ 318

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            V  A      M+ K+V PDI +YN L++GY  +G   E     +E+ +R L P VVTY+
Sbjct: 319 AVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYS 378

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            L+D LC+ G    A+++   MI +GI P+V  Y I+++G    G ++   +  + M+  
Sbjct: 379 LLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVAN 438

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G+ P+ + +   +    K     EA  +   M   G  PD++TY +L+  LCKLG +++A
Sbjct: 439 GISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDA 498

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
                +M+ DG  P+ + + S+++    +    +  +LF  M  +G+ P +V +  ++  
Sbjct: 499 VLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCN 558

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
               G++ +A      M+  G+RPNVI+YN LI G C   R D+A  L   M   G+ P+
Sbjct: 559 LCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPD 618

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             +Y  L+   C  G    A  L++EML + + P   T+S +L
Sbjct: 619 LISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTIL 661



 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 172/608 (28%), Positives = 302/608 (49%), Gaps = 18/608 (2%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSI--KIL 176
           GVK D   + TI++ L ++  +  A             G+L  +I  G+   V     I+
Sbjct: 229 GVKLDVVTYSTIIDGLCKAQAVDRA------------EGVLQHMIDKGVKPDVVTYNTII 276

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           D L     K   V++   V   M+  G+ PDV   N II  L       +A  V + M +
Sbjct: 277 DGL----CKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMID 332

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
             +KP I TYN ++  +   GE +E +  L EM  RG  P+ VTY++L+    +NG+  +
Sbjct: 333 KDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTE 392

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           AR +   M++ G+K +   Y  ++ GY+ +G + +  +L + MV  G++P    +NI++ 
Sbjct: 393 ARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLC 452

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
              K   + +A H F  M +  + PD+++Y  L+   C+ G + +A L F+++ +  + P
Sbjct: 453 AYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTP 512

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
             V +N+L+ GLC     E A++L   M +QG+ P+V+ +  ++   C  G + +A+   
Sbjct: 513 NSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLI 572

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           + M R G++P+  +Y T I G    G T EA +L + M++ G  PDLI+Y+ L+ G CK 
Sbjct: 573 DSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKT 632

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G ++ A  L R+M+  G  P  +TY++I+            ++L+ NM++ G    + TY
Sbjct: 633 GRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTY 692

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
            ++++       ++ AF  F  +  K +RPN+IT+  +I+ L +  R   A  LF  +  
Sbjct: 693 NIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPS 752

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVH 716
            G++PN  TY I++      G   E   L+  M      PD    +A++   L +   + 
Sbjct: 753 HGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMR 812

Query: 717 AVEYLESL 724
           A  YL  +
Sbjct: 813 AGAYLSKI 820



 Score =  275 bits (704), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 167/556 (30%), Positives = 272/556 (48%), Gaps = 35/556 (6%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   V++   V   M+  G+  DV   + II  L       +A  V + M + G+KP +V
Sbjct: 211 KAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVV 270

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TYNT++D  CK   +  A  +L  M  +G  P+ VTYN +I G  +   +++A G+++ M
Sbjct: 271 TYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHM 330

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           +   +K    +YN +I GY   G   E +   EEM  RG+ P + TY++L+  LCK G+ 
Sbjct: 331 IDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKC 390

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG------------------------ 400
           ++AR  F+ M+RK + P++  Y  LL+GY   G I                         
Sbjct: 391 TEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIV 450

Query: 401 -----------EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
                      EA  +F  +    L P VVTY  LID LC+ G ++ A      MIN G+
Sbjct: 451 LCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGV 510

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
            P+ + +  +V G C +     A E F EM  +G++P+   + T +      G    A R
Sbjct: 511 TPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQR 570

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           L + M   G  P++I+YN L+ G C  G  +EA +LL  MV  G  PD I+Y +++    
Sbjct: 571 LIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYC 630

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
           + G +     LF  MLRKG++P  VTY+ ++       R   A   +  M   G + ++ 
Sbjct: 631 KTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIY 690

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           TYN ++NGLC+   +D+A+ +F  +  + + PN  T+TI+I+     G  ++A+ L+  +
Sbjct: 691 TYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASI 750

Query: 690 LDREIEPDYCTHSALL 705
               + P+  T+  ++
Sbjct: 751 PSHGLVPNVVTYCIMM 766



 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 176/604 (29%), Positives = 297/604 (49%), Gaps = 24/604 (3%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSI--KIL 176
           GVK D   + TI++ L ++  +  A             G+L  +I  G+   V     I+
Sbjct: 264 GVKPDVVTYNTIIDGLCKAQAVDRA------------EGVLQHMIDKGVKPDVVTYNTII 311

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           D L     K   V++   V   M+   + PD++  N +I      G   + +EV R + E
Sbjct: 312 DGL----CKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTG---EWKEVVRRLEE 364

Query: 237 F---GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
               G+ P +VTY+ +LD  CK G+  EA ++ + M  +G  PN   Y +L+ G++  G 
Sbjct: 365 MYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGA 424

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           +     L+  M+  G+  + + +N ++C Y++K ++ EA+++   M   G++P + TY I
Sbjct: 425 IADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGI 484

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           LI  LCK GRV DA  +F +M+   V P+ + +N+L+YG C      +A  LF E+  + 
Sbjct: 485 LIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQG 544

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           + P VV +NT++  LC  G + VAQ+L ++M   G+ P+VI+Y  ++ G C  G    A 
Sbjct: 545 VRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAA 604

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
           +  + M+  GL+PD  +Y T + G  K G    AY L  EML KG  P  +TY+ ++ GL
Sbjct: 605 QLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGL 664

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
                  EA EL   M+  G   D  TY  I++   +   +     +F ++  K L P +
Sbjct: 665 FHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNI 724

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
           +T+T++I      GR + A   F+ +   G+ PNV+TY  ++  + +   +D+   LF+ 
Sbjct: 725 ITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLA 784

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDY 713
           ME+ G  P+      +I      G    A     ++ +     +  T S L+     ++Y
Sbjct: 785 MEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISLFSREEY 844

Query: 714 KVHA 717
           K HA
Sbjct: 845 KNHA 848



 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 153/519 (29%), Positives = 263/519 (50%), Gaps = 10/519 (1%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVL---RDNGFSVKAREVYRMMGEF---GIKPS 242
           ++  L +F+++L +     V+  N ++ V+   R +  S  A  ++  M       ++P 
Sbjct: 30  IDDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPD 89

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG-LI 301
           + TY+ +   FC+ G ++        +   G   N V  N L+ G      +++A   L+
Sbjct: 90  LCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILL 149

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG---VAPTLATYNILIYGL 358
           R M + G   +  S N ++ G   +  + EAL L   M   G     P + TYN +I GL
Sbjct: 150 RRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGL 209

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           CK   V  A      M+ K V  D+++Y+T++ G C++  +  A  +   +  + + P V
Sbjct: 210 CKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDV 269

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           VTYNT+IDGLC+   ++ A+ + ++MI++G+ PDV+TY  +++G CK   +  A      
Sbjct: 270 VTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQH 329

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M+ K ++PD   Y   I G L  G+  E  R  EEM A+G  PD++TY++L+  LCK G 
Sbjct: 330 MIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGK 389

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
             EA ++   M+  G  P+   Y  ++H     G +    DL + M+  G+SP    + +
Sbjct: 390 CTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNI 449

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           ++ A+A +  ++ A   FS M   G+ P+V+TY  LI+ LC+L R+D A   F  M  +G
Sbjct: 450 VLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDG 509

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           + PN   +  L+   C    W++A  L+ EM D+ + P+
Sbjct: 510 VTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPN 548



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/154 (23%), Positives = 73/154 (47%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K + V++   +F  +    L P++     +I VL   G    A +++  +   G+ P++V
Sbjct: 701 KTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVV 760

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY  M+ +  +EG + E   L   M+  GC+P+ V  N +I      GE+ +A   +  +
Sbjct: 761 TYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKI 820

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
            ++   + A + + +I  +S +     A +L E+
Sbjct: 821 DEMNFSLEASTTSLLISLFSREEYKNHAKSLPEK 854


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 153/441 (34%), Positives = 250/441 (56%), Gaps = 7/441 (1%)

Query: 269 MQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
           M+  G  PN +TYN L++G    G +  A+ L   M+K G      +YN ++ G+ + G 
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 329 LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNT 388
           L EAL + +  V RG  P + TYN LI G CK  ++ +A+     M+ +N++PD+++YN+
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 389 LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR-YGDLEVAQQLKENMINQ 447
           L+ G C++G + EA +L   +  +   P V+TY+TLI GLCR    +  A +L  +++ Q
Sbjct: 121 LVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
           G  P+V TY I+++G  K   ++ A E F+ +++ GL+PD   YT  I G  K G   +A
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
             + ++M  KG  PD++++N +++GLCK   ++EA  LL  M   G  P+ I++ ++I  
Sbjct: 238 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 297

Query: 568 SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA---HAARGRLELAFMYFSEMQVKGI 624
               G  ++    F  ML++G+ PT+VTY +L+         GR++ A   F  M  KG 
Sbjct: 298 QCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGR 357

Query: 625 RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
            P+V+TY+ALI+GL +  ++D A  L   ME +G +PN YTY  LI+  C      EAL 
Sbjct: 358 VPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALE 417

Query: 685 LYKEMLDREIEPDYCTHSALL 705
           L+  M+++   PD  T+  ++
Sbjct: 418 LFVAMVEKGCVPDTITYGTII 438



 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 158/442 (35%), Positives = 238/442 (53%), Gaps = 7/442 (1%)

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M + G  P+ +TYN +L   C  G M +A  L   M   G SP+ VTYN L+ GF + GE
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           L++A  +    +K G      +YN +I G+ +   L EA  + + MV+  + P + TYN 
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS-GNIGEAFLLFDELRSR 412
           L+ GLCK GRV +AR    +   K   P++I+Y+TL+ G CR    + EA  LF  +  +
Sbjct: 121 LVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
              P V TYN LIDGL +   +  A +L   ++  G+ PD ITYT+ ++G CK G +  A
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
                +M  KG  PD  ++   I G  K     EA  L   M AKG  P+ I++N L+ G
Sbjct: 238 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 297

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA---SLEMGDLRRGRDLFNNMLRKGL 589
            C+ G  ++A    ++M+  G  P  +TY  ++     + + G ++    LF+ M+ KG 
Sbjct: 298 QCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGR 357

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
            P +VTY+ LI      G+L+ A      M+ KG  PNV TYN+LI+GLC L ++D+A  
Sbjct: 358 VPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALE 417

Query: 650 LFIDMEEEGILPNKYTYTILIN 671
           LF+ M E+G +P+  TY  +I+
Sbjct: 418 LFVAMVEKGCVPDTITYGTIIS 439



 Score =  261 bits (668), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 152/442 (34%), Positives = 239/442 (54%), Gaps = 7/442 (1%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           M ++G  P+    N ++  L + G    A+ +Y  M + G  P +VTYNT+L  FCK GE
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           + EAL++      RG  P+ VTYN LI GF +  +L++A+ +++ M+   L     +YN 
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR-VSDARHRFFEMLRK 377
           ++ G  + G + EA  L   +V +G +P + TY+ LI GLC+  R VS+A   F  +L++
Sbjct: 121 LVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
              P++ +YN L+ G  +   + EAF LF  L    L P  +TY   IDGLC+ G +E A
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
             + ++M  +G +PDV+++  ++NG CK   +  A    + M  KG  P+  ++ T I G
Sbjct: 238 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 297

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL---GSLEEANELLRKMVGDGF 554
           + + G   +A    +EML +G  P ++TYN+LV GLCK    G ++EA  L   M+  G 
Sbjct: 298 QCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGR 357

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
           +PD +TY+++I    + G L   R L   M  KG  P + TY  LI       +++ A  
Sbjct: 358 VPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALE 417

Query: 615 YFSEMQVKGIRPNVITYNALIN 636
            F  M  KG  P+ ITY  +I+
Sbjct: 418 LFVAMVEKGCVPDTITYGTIIS 439



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 140/398 (35%), Positives = 215/398 (54%), Gaps = 17/398 (4%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSV-----KAREVYRM 233
           LL  + K   +++ L +F+  ++ G +PDV   N +I     NGF       +A+ + + 
Sbjct: 51  LLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNALI-----NGFCKADKLDEAQRILQR 105

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN-G 292
           M    + P +VTYN++++  CK G + EA  L+ +   +G SPN +TY+ LI+G  R   
Sbjct: 106 MVSENLVPDVVTYNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELR 162

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
            + +A  L   +LK G +    +YN +I G  ++  + EA  L   +V  G+ P   TY 
Sbjct: 163 GVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYT 222

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
           + I GLCK GRV DA     +M  K  +PD++S+N ++ G C+   + EA +L   + ++
Sbjct: 223 VFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAK 282

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM---GNL 469
              P  +++NTLI G CR G  + A    + M+ +G+ P V+TY I+V+G CK    G +
Sbjct: 283 GCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRI 342

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A   F+ M+ KG  PD   Y+  I G  K G   +A RL   M AKG  P++ TYN L
Sbjct: 343 KEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSL 402

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
           + GLC L  ++EA EL   MV  G +PD ITY +II A
Sbjct: 403 ISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIISA 440



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 134/412 (32%), Positives = 220/412 (53%), Gaps = 7/412 (1%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           ++ +M++ G  PDV   N ++      G   +A +++    + G  P +VTYN +++ FC
Sbjct: 32  LYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFC 91

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K  ++ EA  +L  M      P+ VTYN L+ G  +NG +++AR LI D    G   +  
Sbjct: 92  KADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLIVDK---GFSPNVI 148

Query: 315 SYNPIICGYS-EKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
           +Y+ +I G   E   + EAL L   ++ +G  P + TYNILI GL K  RV++A   F  
Sbjct: 149 TYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSG 208

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           +++  + PD I+Y   + G C++G + +A L+  ++  +  VP VV++N +I+GLC+   
Sbjct: 209 LVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKR 268

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           ++ A+ L   M  +G  P+ I++  ++ G C+ G    A   F EML++G++P    Y  
Sbjct: 269 VDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNI 328

Query: 494 QIAGELKL---GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
            + G  K    G   EA  L + M+ KG  PD++TY+ L+ GL K G L++A  LL  M 
Sbjct: 329 LVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAME 388

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             G IP+  TY S+I     +  +    +LF  M+ KG  P  +TY  +I A
Sbjct: 389 AKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIISA 440



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 117/212 (55%), Gaps = 4/212 (1%)

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           M   GF P+ ITYN L+ GLC  G + +A  L  +M+  G+ PD +TY +++H   ++G+
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
           L     +F+  +++G  P +VTY  LI+      +L+ A      M  + + P+V+TYN+
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNA-GNWQEALRLYKEMLDR 692
           L+NGLC+  R+D+A  L +D   +G  PN  TY+ LI+  C       EAL+L+  +L +
Sbjct: 121 LVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 693 EIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
             EP+  T++ L+   L +D    A E    L
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGL 209


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 151/484 (31%), Positives = 259/484 (53%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PSIV +  +L S  K       L L  +M   G  PN  T N+LI  F     +  A  +
Sbjct: 63  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 122

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  +LKLG +    ++  +I G   +G + EAL+L ++M+  G  P + TY  LI GLCK
Sbjct: 123 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 182

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G  S A      M + N  PD++ Y +++   C+   + EAF LF ++  + + P + T
Sbjct: 183 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 242

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y +L+  LC   + +    L   M+N  ILPDV+ ++ +V+  CK G ++ A E  + M+
Sbjct: 243 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 302

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           ++G++PD   YTT + G     +  EA ++ + M+ KGF PD+I+Y  L++G CK+  ++
Sbjct: 303 QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKID 362

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           +A  L  +M    +IPD  TY ++++    +G L+    LF+ M+ +G  P LVTY++L+
Sbjct: 363 KAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILL 422

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
            +      LE A      ++   + P++  YN +I+G+CR   ++ A  LF ++  +G+ 
Sbjct: 423 DSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLH 482

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
           P+ +TY I+I+  C  G   EA +L+ EM   +  PD CT++ +    L  +  + A++ 
Sbjct: 483 PSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQL 542

Query: 721 LESL 724
           LE +
Sbjct: 543 LEEM 546



 Score =  263 bits (672), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 154/536 (28%), Positives = 270/536 (50%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           ++  L  FN++L     P + +  +++  +           +   M  FG+ P++ T N 
Sbjct: 46  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 105

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++SFC    +  A  +L ++   G  P+  T+  LI G    G++ +A  L   M+  G
Sbjct: 106 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 165

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            + +  +Y  +I G  + G    A+ L   M      P +  Y  +I  LCK  +V++A 
Sbjct: 166 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 225

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
           + F +M+ + + PDI +Y +L++  C          L +++ +  ++P VV ++T++D L
Sbjct: 226 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 285

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G +  A ++ + MI +G+ PDV+TYT +++G C    +  A + F+ M+RKG  PD 
Sbjct: 286 CKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDV 345

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
            +YTT I G  K+    +A  L EEM  K + PD  TYN L++GLC +G L++A  L  +
Sbjct: 346 ISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHE 405

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           MV  G +PD +TY+ ++ +  +   L     L   +    L+P +  Y ++I      G 
Sbjct: 406 MVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGE 465

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           LE A   FS +  KG+ P+V TYN +I+GLC+   +++A  LF++M+     P+  TY  
Sbjct: 466 LEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNT 525

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           +            A++L +EML R    D C     +L + D+ Y +   E  + L
Sbjct: 526 IARGFLQNNETLRAIQLLEEMLARGFSADSCFLMLSVLSEDDRRYFIFIPEGFDLL 581



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 136/454 (29%), Positives = 217/454 (47%), Gaps = 35/454 (7%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           ++  L++L+  +   + V     V  K+L+ G  PD      +I+ L   G   +A  ++
Sbjct: 99  NVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLF 158

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M + G +P++VTY T+++  CK G    A+ LL  M+   C P+ V Y  +I    ++
Sbjct: 159 DKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKD 218

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPII---CGYSE----------------------- 325
            ++ +A  L   M+  G+     +Y  ++   C   E                       
Sbjct: 219 RQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIF 278

Query: 326 ---------KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
                    +G + EA  + + M+ RGV P + TY  L+ G C    + +A   F  M+R
Sbjct: 279 STVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVR 338

Query: 377 KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
           K   PD+ISY TL+ GYC+   I +A  LF+E+  +  +P   TYNTL+ GLC  G L+ 
Sbjct: 339 KGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQD 398

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
           A  L   M+ +G +PD++TY+I+++  CK  +L  A      +    L PD   Y   I 
Sbjct: 399 AIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIID 458

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
           G  + G+   A  L   + +KG  P + TYN+++HGLCK G L EAN+L  +M G+   P
Sbjct: 459 GMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSP 518

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
           D  TY +I    L+  +  R   L   ML +G S
Sbjct: 519 DGCTYNTIARGFLQNNETLRAIQLLEEMLARGFS 552



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 117/243 (48%)

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
           S     L  A   FN +L     P    +   +    K+   S    L  +M + G PP+
Sbjct: 40  SLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPN 99

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
           + T N+L++  C L  +  A  +L K++  G  PD  T+T++I      G +     LF+
Sbjct: 100 VYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFD 159

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
            M+ +G  P +VTY  LI+     G    A      M+    +P+V+ Y ++I+ LC+ R
Sbjct: 160 KMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDR 219

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
           ++ +A+ LF  M  +GI P+ +TYT L++  CN   W+    L  +M++ +I PD    S
Sbjct: 220 QVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFS 279

Query: 703 ALL 705
            ++
Sbjct: 280 TVV 282



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 134/284 (47%), Gaps = 27/284 (9%)

Query: 123 DEFVFCTILEILIESGLLRSAYWVVETVV-------CVNMHGILDVLIGGGLSSCV--SI 173
           D  +F T+++ L + G +  A+ +V+ ++        V    ++D   G  L S +  ++
Sbjct: 274 DVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMD---GHCLQSEMDEAV 330

Query: 174 KILDLLL-------------LI--YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL 218
           K+ D+++             LI  Y K   +++ + +F +M R   +PD K  N ++  L
Sbjct: 331 KVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGL 390

Query: 219 RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNG 278
              G    A  ++  M   G  P +VTY+ +LDS CK   ++EA+ LL  ++    +P+ 
Sbjct: 391 CHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDI 450

Query: 279 VTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
             YN++I G  R GELE AR L  ++   GL  S  +YN +I G  ++GLL EA  L  E
Sbjct: 451 QVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFME 510

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
           M     +P   TYN +  G  +      A     EML +    D
Sbjct: 511 MDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSAD 554



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 71/136 (52%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +LL    K   +E+ + +   +  + L PD++  N II  +   G    AR+++  +   
Sbjct: 420 ILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSK 479

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G+ PS+ TYN M+   CK G + EA +L  EM G  CSP+G TYN +  GF +N E  +A
Sbjct: 480 GLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRA 539

Query: 298 RGLIRDMLKLGLKVSA 313
             L+ +ML  G    +
Sbjct: 540 IQLLEEMLARGFSADS 555


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 164/531 (30%), Positives = 277/531 (52%), Gaps = 8/531 (1%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y +K  V++ + VF +M      P + + N I+ +L + G+  +A +VY  M   GI P 
Sbjct: 86  YGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPD 145

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           + T+   + SFC+      AL LL  M  +GC  N V Y  +I+GF       +A  L  
Sbjct: 146 VCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFN 205

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            ML+LG+     ++N ++    +KG L E   L  +++  GV P L T+NI I GLC+ G
Sbjct: 206 KMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKG 265

Query: 363 -------RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
                  +V +A +   +M+ K + PD  +YNT++YGY + G I +A  +  + + +  V
Sbjct: 266 VLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFV 325

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P   TY +LI G+C+ GD++ A  L E  + +G+ P ++ Y  ++ G  + G +  A + 
Sbjct: 326 PDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQL 385

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
            N+M ++G+ PD + Y   I G  K+G  S+A  L    +AKG+ PD+ T+N L+ G CK
Sbjct: 386 MNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCK 445

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
              ++ A  +L  M   G  PD ITY SI++   +        + F  ++ KG  P ++T
Sbjct: 446 RLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIIT 505

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           Y +LI +     ++  A     E++ +G+ P+ +++  +I+G C    +D+AY LF  ME
Sbjct: 506 YNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRME 565

Query: 656 EE-GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           ++  I     TY I+IN      +   A +L+ EM D+  +PD  T+  ++
Sbjct: 566 QQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMI 616



 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 167/513 (32%), Positives = 255/513 (49%), Gaps = 12/513 (2%)

Query: 191 QCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTML 250
           Q   V+ +M   G+ PDV      IK        + A  +   M   G + + V Y T++
Sbjct: 129 QAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVI 188

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
             F +E    EA EL  +M   G  P+  T+N L+    + G L++   L+  +LK G+ 
Sbjct: 189 SGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVC 248

Query: 311 VSAHSYNPIICGYSEKGLL-------VEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
            +  ++N  I G   KG+L       VEA N   +MV +G+ P   TYN +IYG  K G+
Sbjct: 249 PNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGK 308

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           + DA     +   K  +PD  +Y +L+ G C+ G+I  A  LF+E   + L P++V YNT
Sbjct: 309 IQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNT 368

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           LI GL + G +  A QL  +M  +G+ PD+ TY +++NG CKMG +S A    N  + KG
Sbjct: 369 LIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKG 428

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
             PD F + T I G  K      A  + + M + G  PD+ITYN +++GLCK    E+  
Sbjct: 429 YLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVM 488

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
           E  + ++  G +P+ ITY  +I +  +   +    DL   +  +GL P  V++  +I   
Sbjct: 489 ETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGF 548

Query: 604 AARGRLELAFMYFSEM-QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
              G L+ A+  F  M Q   I   V TYN +IN       +D A  LF +M ++G  P+
Sbjct: 549 CNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPD 608

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIE 695
            YTY ++I+  C  GN         + L +EIE
Sbjct: 609 SYTYRVMIDGFCKVGNVNSGY----DFLLKEIE 637



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 159/546 (29%), Positives = 277/546 (50%), Gaps = 24/546 (4%)

Query: 94  VRVLNRIREK-PRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVC 152
           +R+ +  R K P  ALR    + +Q G + +  V+CT++    E      AY +   ++ 
Sbjct: 151 IRIKSFCRTKRPLAALRLLNNMPSQ-GCELNAVVYCTVISGFYEENYQVEAYELFNKMLR 209

Query: 153 VNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCN 212
           +   GI              I   + L+ I  KK  +++   + NK+L+NG+ P++   N
Sbjct: 210 L---GIFP-----------HIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFN 255

Query: 213 RIIKVLRDNGF-------SVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
             I+ L   G         V+A      M   G++P   TYNT++  + K G++Q+A  +
Sbjct: 256 IFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRI 315

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           L + + +G  P+  TY  LI G  ++G+++ A  L  + L  GLK S   YN +I G S+
Sbjct: 316 LKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQ 375

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
           +GL+++AL L  +M   G++P + TYN++I GLCK G VSDA +     + K  +PDI +
Sbjct: 376 QGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFT 435

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           +NTL+ GYC+   +  A  + D + S  + P V+TYN++++GLC+    E   +  + ++
Sbjct: 436 FNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIM 495

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
            +G LP++ITY I++   CK   ++ A +   E+  +GL PD  ++ T I+G    GD  
Sbjct: 496 EKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLD 555

Query: 506 EAYRLQEEMLAK-GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
           EAY+L   M  +      + TYN++++   +   ++ A +L  +M   G  PD  TY  +
Sbjct: 556 EAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVM 615

Query: 565 IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
           I    ++G++  G D     +  G  P+L T+  +I+    + R+  A      M   G+
Sbjct: 616 IDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGV 675

Query: 625 RPNVIT 630
            P  + 
Sbjct: 676 VPEAVV 681



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 146/533 (27%), Positives = 264/533 (49%), Gaps = 20/533 (3%)

Query: 204 LLPDVKNCNRIIKVLRDNGFSVKAREVYR-MMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           LLP  K+   ++K  +D    +KA  ++  +  E G K + +TY  M++     GE    
Sbjct: 5   LLP--KHVAAVLKYQKD---PLKALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAM 59

Query: 263 LELLWEMQGRGCSPNGVTYNVLITG---FSRNGELEQARGLIRDMLKLGLKVSAHSYNPI 319
             +L EM  R    N +   V ++    + R G++++A  +   M     + S  SYN I
Sbjct: 60  ERVLMEM--RLNVDNSLLEGVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAI 117

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           +    E G   +A  +   M   G+AP + T+ I I   C+  R   A      M  +  
Sbjct: 118 MNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGC 177

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
             + + Y T++ G+       EA+ LF+++    + P + T+N L+  LC+ G L+  ++
Sbjct: 178 ELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEK 237

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLS-------MAREFFNEMLRKGLQPDRFAYT 492
           L   ++  G+ P++ T+ I + G C+ G L         A  + ++M+ KGL+PD F Y 
Sbjct: 238 LLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYN 297

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
           T I G  K+G   +A R+ ++   KGF PD  TY  L+ G+C+ G ++ A  L  + +G 
Sbjct: 298 TIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGK 357

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
           G  P  + Y ++I    + G + +   L N+M ++G+SP + TY ++I+     G +  A
Sbjct: 358 GLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDA 417

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
               +    KG  P++ T+N LI+G C+  ++D A G+   M   G+ P+  TY  ++N 
Sbjct: 418 NNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNG 477

Query: 673 NCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKV-HAVEYLESL 724
            C A   ++ +  +K ++++   P+  T++ +L++ L K  KV  A++ LE +
Sbjct: 478 LCKAAKPEDVMETFKMIMEKGCLPNIITYN-ILIESLCKARKVTEALDLLEEI 529


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 166/531 (31%), Positives = 280/531 (52%), Gaps = 2/531 (0%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           +I I +LL  +   K   E   ++ ++M   G +PDV +   ++K L  +  S +A E+ 
Sbjct: 143 TIMISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELL 202

Query: 232 RMMGEFGIK--PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           RMM E G    P+ V YNT++D F KEG++ +A +L  EM  RG SP+  TYN ++    
Sbjct: 203 RMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALC 262

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           +   +++A  ++R M+  G+     +YN +I GYS  G   EA+ + ++M ++G+ P + 
Sbjct: 263 KARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVV 322

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           T N L+  LCK G++ DAR  F  M  K    DI SY  +L GY   G + +   LF+ +
Sbjct: 323 TLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLM 382

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
            S  + P    +N LI    + G L+ A  +   M  QG+ PDV+TY+ ++   C++G +
Sbjct: 383 LSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKM 442

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A E FN+M+ +G+ P    Y   I G    GD  +A  L  +M+ KG  PD+  +N +
Sbjct: 443 DDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFI 502

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           ++ LCKLG + +A  +    +  G  P+ + Y +++     +G +     +F+ M+  G+
Sbjct: 503 INNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGI 562

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
            P +V Y  L++ +   GR++     F E+  KGI+P+   YN +++GL +  R   A  
Sbjct: 563 QPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKV 622

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
            F +M E GI  ++YTY+I++          EA+ L+KE+    ++ D  T
Sbjct: 623 KFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITT 673



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 152/543 (27%), Positives = 284/543 (52%), Gaps = 1/543 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K+  V +   +FN+M++ G+ PD+   N ++  L       KA  + R M + G+ P 
Sbjct: 226 FFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPD 285

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             TYN+++  +   G+ +EA+ +  +M  +G  P+ VT N L+    ++G+++ AR +  
Sbjct: 286 NWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFD 345

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M   G K    SY  ++ GY+ KG LV+   L   M++ G+AP    +N+LI    K G
Sbjct: 346 SMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCG 405

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            +  A   F EM  + V PD+++Y+T++   CR G + +A   F+++  + + P++ TY+
Sbjct: 406 MLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYH 465

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            LI G C +GDL  A+ L   M+N+G+ PD+  +  ++N  CK+G +  A+  F+  +  
Sbjct: 466 FLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISI 525

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           GL P+   Y T + G   +G    A R+ + M++ G  P+++ Y  LV+G CK+G ++E 
Sbjct: 526 GLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEG 585

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             L R+++  G  P    Y  I+H   + G     +  F+ M   G++    TY++++  
Sbjct: 586 LSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGG 645

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
                  + A + F E+    ++ ++ T N +I G+ ++RR+++A  LF  +   G++P+
Sbjct: 646 LFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPS 705

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIE-PDYCTHSALLLKQLDKDYKVHAVEYL 721
             TY+I++      G  +EA  ++  M +   E P+    + ++ + L+K   V A  YL
Sbjct: 706 VVTYSIMMTNLIKEGLVEEADDMFSSMENAGCEQPNSQLLNHVVRELLEKREIVRAGTYL 765

Query: 722 ESL 724
             +
Sbjct: 766 SKI 768



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 149/504 (29%), Positives = 256/504 (50%), Gaps = 1/504 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y+     ++ + V  KM   G+LPDV   N ++  L  +G    AR+V+  M   G K  
Sbjct: 296 YSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTD 355

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           I +Y  ML+ +  +G + +  EL   M   G +P+   +NVLI  +++ G L++A  +  
Sbjct: 356 IFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFN 415

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M + G++    +Y+ +I      G + +A+    +M+ +GVAP+++TY+ LI G C  G
Sbjct: 416 EMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHG 475

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            +  A+    +M+ K + PDI  +N ++   C+ G + +A  +FD   S  L P V+ YN
Sbjct: 476 DLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYN 535

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           TL+DG C  G +E A ++ + M++ GI P+V+ Y  +VNG CK+G +      F E+L K
Sbjct: 536 TLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHK 595

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G++P    Y   + G  + G T  A     EM   G   D  TY++++ GL K    +EA
Sbjct: 596 GIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEA 655

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             L +++       D  T   +I    ++  +   +DLF ++ R GL P++VTY++++  
Sbjct: 656 ILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTN 715

Query: 603 HAARGRLELAFMYFSEMQVKGI-RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
               G +E A   FS M+  G  +PN    N ++  L   R I +A      ++E     
Sbjct: 716 LIKEGLVEEADDMFSSMENAGCEQPNSQLLNHVVRELLEKREIVRAGTYLSKIDERSFSL 775

Query: 662 NKYTYTILINENCNAGNWQEALRL 685
           +  T T+LI+   + G  +E +R 
Sbjct: 776 DHSTTTLLIDLFSSKGTCREHIRF 799



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 131/473 (27%), Positives = 220/473 (46%), Gaps = 40/473 (8%)

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
           R  SP   TY +L+   +R    +        +LK GL +     + ++ G  E     E
Sbjct: 102 RVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAE 161

Query: 332 ALN-LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN---VIPDIISYN 387
           AL+ L   M   G  P + +Y I++  LC   R S        M+ +     +P+ ++YN
Sbjct: 162 ALDILLHRMPHLGCVPDVFSYCIVLKSLCS-DRKSGQADELLRMMAEGGAVCLPNAVAYN 220

Query: 388 TLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY---------------- 431
           T++ G+ + G++ +A  LF+E+  R + P + TYN +++ LC+                 
Sbjct: 221 TVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDK 280

Query: 432 -------------------GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
                              G  + A ++ + M +QGILPDV+T   ++   CK G +  A
Sbjct: 281 GVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDA 340

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
           R+ F+ M  KG + D F+Y   + G    G   +   L   ML+ G  PD   +NVL+  
Sbjct: 341 RDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKA 400

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
             K G L+ A  +  +M   G  PD +TY+++I A   +G +    + FN M+ +G++P+
Sbjct: 401 YAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPS 460

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
           + TY  LI      G L  A     +M  KG+RP++  +N +IN LC+L R+  A  +F 
Sbjct: 461 ISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFD 520

Query: 653 DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
                G+ PN   Y  L++  C  G  + ALR++  M+   I+P+   +  L+
Sbjct: 521 FTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLV 573



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 110/424 (25%), Positives = 200/424 (47%), Gaps = 3/424 (0%)

Query: 153 VNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCN 212
           V++  + ++++  G++      I ++L+  Y K  M+++  ++FN+M   G+ PDV   +
Sbjct: 373 VDLTELFNLMLSDGIAP--DSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYS 430

Query: 213 RIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR 272
            +I  L   G    A E +  M + G+ PSI TY+ ++  FC  G++ +A +L+ +M  +
Sbjct: 431 TVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNK 490

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA 332
           G  P+   +N +I    + G +  A+ +    + +GL  +   YN ++ GY   G +  A
Sbjct: 491 GMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENA 550

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
           L + + MV+ G+ P +  Y  L+ G CK GR+ +    F E+L K + P    YN +L+G
Sbjct: 551 LRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHG 610

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
             ++G    A + F E+    +     TY+ ++ GL +    + A  L + +    +  D
Sbjct: 611 LFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKID 670

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
           + T  IM+ G  ++  +  A++ F  + R GL P    Y+  +   +K G   EA  +  
Sbjct: 671 ITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFS 730

Query: 513 EMLAKGF-PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
            M   G   P+    N +V  L +   +  A   L K+    F  DH T T +I      
Sbjct: 731 SMENAGCEQPNSQLLNHVVRELLEKREIVRAGTYLSKIDERSFSLDHSTTTLLIDLFSSK 790

Query: 572 GDLR 575
           G  R
Sbjct: 791 GTCR 794


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 157/489 (32%), Positives = 265/489 (54%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P +   N+I+  L        A  +++ M   GI+P + T N +++ FC  G+M  +  +
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           L ++   G  PN +T N L+ G    GE++++      ++  G ++   SY  ++ G  +
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
            G    AL L   +  R   P +  YN +I GLCK   V++A   + EM  + + P++I+
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           Y+TL+YG+C +G + EAF L +E+  +N+ P V TY  L+D LC+ G ++ A+ L   M 
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
            +G+ P+V++Y  +++G C +G +  A++ F+ M++KG+ P+ ++Y   I    K     
Sbjct: 248 KEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVD 307

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           EA  L  E+L K   P+ +TY+ L+ G CKLG +  A +LL++M   G   D +TYTS++
Sbjct: 308 EAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLL 367

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
            A  +  +L +   LF  M  +G+ P   TYT LI      GR + A   F  + VKG R
Sbjct: 368 DALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCR 427

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
            NV TYN +I+GLC+   +D+A  +   MEE G +P+  T+ I+I          +A +L
Sbjct: 428 INVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKL 487

Query: 686 YKEMLDREI 694
             EM+ +++
Sbjct: 488 LHEMIAKDL 496



 Score =  261 bits (668), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 149/484 (30%), Positives = 258/484 (53%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P I+ +N ++ S  K      A+ L  +MQ +G  P+  T N+LI  F   G++  +  +
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  +LKLG + +  + N ++ G   KG + ++L+  +++V +G      +Y  L+ GLCK
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G    A      +  ++  P+++ YNT++ G C+   + EA+ L+ E+ +R + P V+T
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y+TLI G C  G L  A  L   MI + I P+V TYTI+++  CK G +  A+     M 
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           ++G++P+  +Y T + G   +G+   A ++   M+ KG  P++ +YN+++  LCK   ++
Sbjct: 248 KEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVD 307

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA  LLR+++    +P+ +TY+S+I    ++G +    DL   M  +G    +VTYT L+
Sbjct: 308 EAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLL 367

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
            A      L+ A   F +M+ +GI+PN  TY ALI+GLC+  R   A  LF  +  +G  
Sbjct: 368 DALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCR 427

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
            N +TY ++I+  C  G   EAL +  +M +    PD  T   ++    +KD    A + 
Sbjct: 428 INVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKL 487

Query: 721 LESL 724
           L  +
Sbjct: 488 LHEM 491



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 140/404 (34%), Positives = 226/404 (55%)

Query: 186 KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVT 245
           K  V++ L   +K++  G   D  +   ++  L   G +  A ++ RM+ +   +P++V 
Sbjct: 93  KGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVM 152

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           YNT++D  CK+  + EA +L  EM  RG  PN +TY+ LI GF   G+L +A GL+ +M+
Sbjct: 153 YNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMI 212

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
              +  + ++Y  ++    ++G + EA NL   M   GV P + +YN L+ G C  G V 
Sbjct: 213 LKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQ 272

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
           +A+  F  M++K V P++ SYN ++   C+S  + EA  L  E+  +N+VP  VTY++LI
Sbjct: 273 NAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLI 332

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           DG C+ G +  A  L + M ++G   DV+TYT +++  CK  NL  A   F +M  +G+Q
Sbjct: 333 DGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQ 392

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           P+++ YT  I G  K G    A +L + +L KG   ++ TYNV++ GLCK G L+EA  +
Sbjct: 393 PNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAM 452

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
             KM  +G IPD +T+  II +  E     +   L + M+ K L
Sbjct: 453 KSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDL 496



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 145/466 (31%), Positives = 244/466 (52%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F +M   G+ PD+   N +I      G    +  V   + + G +P+ +T NT++   C
Sbjct: 32  LFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMKGLC 91

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
            +GE++++L    ++  +G   + V+Y  L+ G  + GE   A  L+R +     + +  
Sbjct: 92  LKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVV 151

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
            YN II G  +  L+ EA +L  EM  RG+ P + TY+ LIYG C  G++ +A     EM
Sbjct: 152 MYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEM 211

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           + KN+ P++ +Y  L+   C+ G + EA  L   +    + P VV+YNTL+DG C  G++
Sbjct: 212 ILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEV 271

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A+Q+   M+ +G+ P+V +Y IM++  CK   +  A     E+L K + P+   Y++ 
Sbjct: 272 QNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSL 331

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I G  KLG  + A  L +EM  +G P D++TY  L+  LCK  +L++A  L  KM   G 
Sbjct: 332 IDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGI 391

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            P+  TYT++I    + G  +  + LF ++L KG    + TY V+I      G L+ A  
Sbjct: 392 QPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALA 451

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
             S+M+  G  P+ +T+  +I  L    + D+A  L  +M  + +L
Sbjct: 452 MKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDLL 497



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/448 (27%), Positives = 216/448 (48%), Gaps = 55/448 (12%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           +L F   V  Q G + D+  + T+L  L + G  RSA  ++  +                
Sbjct: 99  SLHFHDKVVAQ-GFQMDQVSYATLLNGLCKIGETRSALKLLRMI--------------ED 143

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
            S+  ++ + + ++    K  +V +   ++++M   G+ P+V   + +I      GF + 
Sbjct: 144 RSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIY-----GFCLA 198

Query: 227 AR--EVYRMMGEF---GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY 281
            +  E + ++ E     I P++ TY  ++D+ CKEG+++EA  LL  M   G  PN V+Y
Sbjct: 199 GQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSY 258

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
           N L+ G+   GE++ A+ +   M++ G+  + +SYN +I    +   + EA+NL  E++ 
Sbjct: 259 NTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLH 318

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
           + + P   TY+ LI G CK GR++ A     EM  +    D+++Y +LL   C++ N+ +
Sbjct: 319 KNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDK 378

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           A  LF +++ R + P   TY  LIDGLC+ G  + AQ+L ++++ +G   +V TY +M++
Sbjct: 379 ATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMIS 438

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI-------------------------- 495
           G CK G L  A    ++M   G  PD   +   I                          
Sbjct: 439 GLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDLLR 498

Query: 496 ----AGELKLGDTSEAYRLQEEMLAKGF 519
                GE    +  +A +L  EM+AKG 
Sbjct: 499 FRDFHGERSPNENDKAEKLLHEMIAKGL 526


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 159/517 (30%), Positives = 267/517 (51%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           ++  L  F +M+R    P V    + +              +   M  FG+  ++ + N 
Sbjct: 69  IDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNV 128

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++  C+   +  A+ +L +M   G  P   T+N LI G    G++++A  L  +M++ G
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRG 188

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            + +  SYN II G  + G    A+++ ++M   G  P + TYN +I  LCK   V+DA 
Sbjct: 189 HEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAM 248

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               EML + + P++ +YN +++G+C  G + EA  LF E+  R+++P  VT   L+DGL
Sbjct: 249 EFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGL 308

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G +  A+ + E M  +G+ P++ TY  +++G C    ++ A++ F  M+R+G  P  
Sbjct: 309 CKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGV 368

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
            +Y   I G  K     EA  L  EM  K   PD +TY+ L+ GLC+ G  +EA  + ++
Sbjct: 369 HSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKE 428

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M   G +P+ +TY+ ++    + G L     L  +M  K L P +V +T+LI      G+
Sbjct: 429 MCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGK 488

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           LE+A   FS++   GIRP + TY  +I GL +    D+AY LF  ME++G LPN  +Y +
Sbjct: 489 LEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNV 548

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +I       +   A+RL  EM+ +    +  T   LL
Sbjct: 549 MIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLL 585



 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 155/489 (31%), Positives = 260/489 (53%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + KK      + + N+M   G+  +V + N +I  L        A  +   M + GI P+
Sbjct: 98  FAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPT 157

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             T+N +++  C EG+++EA+EL  EM  RG  PN ++YN +I G  + G    A  + +
Sbjct: 158 ASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFK 217

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M + G K    +YN II    +  L+ +A+    EM+ RG+ P + TYN +++G C  G
Sbjct: 218 KMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILG 277

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           ++++A   F EM+ ++V+PD ++   L+ G C+ G + EA L+F+ +  + + P + TYN
Sbjct: 278 QLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYN 337

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            L+DG C    +  A+++ E MI QG  P V +Y I++NG CK   +  A+    EM  K
Sbjct: 338 ALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHK 397

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
            L PD   Y+T + G  + G   EA  + +EM + G  P+L+TY++L+ G CK G L+EA
Sbjct: 398 ALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEA 457

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            +LL+ M      P+ + +T +I      G L   ++LF+ +   G+ PT+ TYTV+I  
Sbjct: 458 LKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKG 517

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
               G  + A+  F +M+  G  PN  +YN +I G  + +    A  L  +M  +    N
Sbjct: 518 LLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSAN 577

Query: 663 KYTYTILIN 671
             T+ +L++
Sbjct: 578 LSTFQMLLD 586



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 153/494 (30%), Positives = 257/494 (52%), Gaps = 1/494 (0%)

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
           YRM+     +PS+  +   L SF K+ +    + L  +M   G + N  + NVLI    R
Sbjct: 77  YRMV-RMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCR 135

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
              ++ A  ++  M KLG+  +A ++N +I G   +G + EA+ L  EMV RG  P + +
Sbjct: 136 LNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVIS 195

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           YN +I GLCK G  S A   F +M +    PD+++YNT++   C+   + +A     E+ 
Sbjct: 196 YNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEML 255

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
            R + P V TYN ++ G C  G L  A +L + M+ + ++PD +T TI+V+G CK G +S
Sbjct: 256 DRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVS 315

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            AR  F  M  KG++P+   Y   + G       +EA ++ E M+ +G  P + +YN+L+
Sbjct: 316 EARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILI 375

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
           +G CK   ++EA  LL +M      PD +TY++++    + G  +   ++F  M   GL 
Sbjct: 376 NGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLL 435

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           P LVTY++L+      G L+ A      MQ K + PN++ +  LI G+    +++ A  L
Sbjct: 436 PNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKEL 495

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLD 710
           F  +  +GI P   TYT++I      G   EA  L+++M D    P+ C+++ ++   L 
Sbjct: 496 FSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQ 555

Query: 711 KDYKVHAVEYLESL 724
                 A+  ++ +
Sbjct: 556 NQDSSTAIRLIDEM 569



 Score =  245 bits (625), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 146/461 (31%), Positives = 233/461 (50%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
           L++L+    + + V+  + +  KM + G+ P     N +I  L + G   +A E++  M 
Sbjct: 126 LNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMV 185

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
             G +P++++YNT+++  CK G    A+++  +M+  GC P+ VTYN +I    ++  + 
Sbjct: 186 RRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVN 245

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
            A   + +ML  G+  +  +YN ++ G+   G L EA  L +EMV R V P   T  IL+
Sbjct: 246 DAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILV 305

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
            GLCK G VS+AR  F  M  K V P+I +YN L+ GYC    + EA  +F+ +  +   
Sbjct: 306 DGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCA 365

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P V +YN LI+G C+   ++ A+ L   M ++ + PD +TY+ ++ G C+ G    A   
Sbjct: 366 PGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNI 425

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
           F EM   GL P+   Y+  + G  K G   EA +L + M  K   P+++ + +L+ G+  
Sbjct: 426 FKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFI 485

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
            G LE A EL  K+  DG  P   TYT +I   L+ G      DLF  M   G  P   +
Sbjct: 486 AGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCS 545

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
           Y V+I           A     EM  K    N+ T+  L++
Sbjct: 546 YNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLD 586



 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 131/422 (31%), Positives = 226/422 (53%)

Query: 284 LITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG 343
            ++  S N  ++ A      M+++  + S   +   +  +++K      ++L  +M   G
Sbjct: 59  FVSNNSTNISIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFG 118

Query: 344 VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF 403
           V   + + N+LI  LC+   V  A     +M +  + P   ++N L+ G C  G I EA 
Sbjct: 119 VTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAV 178

Query: 404 LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
            LF+E+  R   P V++YNT+I+GLC+ G+  +A  + + M   G  PDV+TY  +++  
Sbjct: 179 ELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSL 238

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
           CK   ++ A EF +EML +G+ P+ F Y   + G   LG  +EA RL +EM+ +   PD 
Sbjct: 239 CKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDT 298

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
           +T  +LV GLCK G + EA  +   M   G  P+  TY +++        +   + +F  
Sbjct: 299 VTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEI 358

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           M+R+G +P + +Y +LI+      R++ A    +EM  K + P+ +TY+ L+ GLC+  R
Sbjct: 359 MIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGR 418

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSA 703
             +A  +F +M   G+LPN  TY+IL++  C  G+  EAL+L K M ++++EP+   H+ 
Sbjct: 419 PKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTI 478

Query: 704 LL 705
           L+
Sbjct: 479 LI 480



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 131/260 (50%), Gaps = 10/260 (3%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGF--SVKARE 229
           +I   + L+  Y  + ++ +   VF  M+R G  P V + N +I     NGF  S +  E
Sbjct: 332 NISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILI-----NGFCKSRRMDE 386

Query: 230 VYRMMGEF---GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
              ++ E     + P  VTY+T++   C+ G  +EAL +  EM   G  PN VTY++L+ 
Sbjct: 387 AKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLD 446

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           GF ++G L++A  L++ M +  L+ +   +  +I G    G L  A  L  ++   G+ P
Sbjct: 447 GFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRP 506

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
           T+ TY ++I GL K G   +A   F +M     +P+  SYN ++ G+ ++ +   A  L 
Sbjct: 507 TIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLI 566

Query: 407 DELRSRNLVPTVVTYNTLID 426
           DE+  +     + T+  L+D
Sbjct: 567 DEMVGKRFSANLSTFQMLLD 586


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  283 bits (724), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 165/512 (32%), Positives = 272/512 (53%), Gaps = 10/512 (1%)

Query: 200 LRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF-GIKPSIVTYNTMLDSFCKEGE 258
           +R  + P+ +  N ++  L     + KA EV + M +   + P +VTY+T+++ FCK+GE
Sbjct: 1   MREFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGE 60

Query: 259 MQEALELLWEMQGR-GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
           M  A E+L EM  R G +P+ VTY  ++ G  R+G++++A  ++R+M   G++    +++
Sbjct: 61  MDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFS 120

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM-LR 376
            +I G+     + EAL L +E++T        + + LI GLC+  R+ +A   F EM +R
Sbjct: 121 ALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMR 180

Query: 377 KNVI--PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           ++    PD+++Y  L+ G+C+SGN+ +A  +   +  R  VP VVTY++L+ GLC+ GDL
Sbjct: 181 EDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDL 240

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A  L   M ++G +P+V+TYT +++G C    +  AR   +EM       D  +Y   
Sbjct: 241 DQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNAL 300

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM-VGDG 553
           + G  +LG   EA +L +EM AK   PD ITY  LV G C    LEEA  LL  M    G
Sbjct: 301 LDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAG 360

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
             PD +TY+ ++             +    M+ + ++P  VTY+ LI      GR+  A 
Sbjct: 361 IDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAM 420

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
                +     +P+V+TY  +I GLC   R ++A  L  +M  + + P+  T+  +I   
Sbjct: 421 EVLKNVD----KPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGAL 476

Query: 674 CNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           C  G+  EA +L   M    +EP   T++ LL
Sbjct: 477 CRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLL 508



 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 156/499 (31%), Positives = 265/499 (53%), Gaps = 11/499 (2%)

Query: 198 KMLRNG--LLPDVKNCNRIIKVLRDNGFSVKAREVYR-MMGEFGIKPSIVTYNTMLDSFC 254
           K +R+G  + PD+   + +I      G   +A E+ R M+   G+ P +VTY +++D  C
Sbjct: 33  KEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVDGLC 92

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           ++G+M  A E++ EM+ +G  P+  T++ LITG+    ++++A  L +++L    ++ A 
Sbjct: 93  RDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAV 152

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTR---GVAPTLATYNILIYGLCKWGRVSDARHRF 371
           S + +I G   +  + EA  L +EM  R      P + TY  LI G CK G +  A    
Sbjct: 153 SSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKML 212

Query: 372 FEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY 431
             M  +  +P++++Y++LL+G C++G++ +A  LF  + S+  VP VVTY TLI GLC  
Sbjct: 213 GVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAA 272

Query: 432 GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAY 491
             ++ A+ L + M       D ++Y  +++G C++G +  A++ F EM  K   PDR  Y
Sbjct: 273 HKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITY 332

Query: 492 TTQIAGELKLGDTSEAYRLQEEM-LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           T  + G        EA  L E M  A G  PD++TY+++V G  +     EA E +++M+
Sbjct: 333 TCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMI 392

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
                P+ +TY+S+I    + G +    ++  N+ +    P +VTYT++I       R E
Sbjct: 393 ARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK----PDVVTYTIVIEGLCGTDRTE 448

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
            A     EM  K + P+V T+N++I  LCRL  +D+A+ L + M   G+ P   TYT L+
Sbjct: 449 EALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLL 508

Query: 671 NENCNAGNWQEALRLYKEM 689
                 G  + A  L++ M
Sbjct: 509 EGFSRTGRMEIAYELFEVM 527



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 153/454 (33%), Positives = 228/454 (50%), Gaps = 47/454 (10%)

Query: 240 KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
           KP +VTY  ++D FCK G +++A+++L  M+GR C PN VTY+ L+ G  + G+L+QA  
Sbjct: 186 KPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQA-- 243

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
                                            L+L   M ++G  P + TY  LI+GLC
Sbjct: 244 ---------------------------------LDLFRRMTSKGCVPNVVTYTTLIHGLC 270

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
              +V  AR    EM       D +SYN LL GYCR G I EA  LF E+ +++ +P  +
Sbjct: 271 AAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRI 330

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENM-INQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           TY  L+ G C    LE A+ L ENM    GI PDV+TY+I+V G  +      A EF  E
Sbjct: 331 TYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQE 390

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M+ + + P+   Y++ I G  K G  + A     E+L     PD++TY +++ GLC    
Sbjct: 391 MIARNVAPNAVTYSSLIDGLCKAGRVNHAM----EVLKNVDKPDVVTYTIVIEGLCGTDR 446

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
            EEA  LL +MV     P   T+ S+I A   +GD+     L   M   GL P +VTYT 
Sbjct: 447 TEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTT 506

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIR----PNVI---TYNALINGLCRLRRIDQAYGLF 651
           L+   +  GR+E+A+  F  M+ K  +     N++    ++ALI GLC+ R ID+A  + 
Sbjct: 507 LLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVV 566

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
            ++      P +     +++    AG  +EA +L
Sbjct: 567 EELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKL 600



 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 133/387 (34%), Positives = 217/387 (56%), Gaps = 6/387 (1%)

Query: 344 VAPTLATYNILIYGLCKWGRVSDARHRFFEMLR-KNVIPDIISYNTLLYGYCRSGNIGEA 402
           VAP   TYN+++ GLCK    S A     EM   K+V PD+++Y+T++ G+C+ G +  A
Sbjct: 5   VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 64

Query: 403 FLLFDELRSRN-LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
             +  E+ +R+ + P VVTY +++DGLCR G ++ A ++   M  +G+ PD  T++ ++ 
Sbjct: 65  CEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT 124

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK---G 518
           G C    +  A + + E+L    + D  + +  I G  +     EAY L +EM  +    
Sbjct: 125 GWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGA 184

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
           + PD++TY  L+ G CK G+LE+A ++L  M G   +P+ +TY+S++H   + GDL +  
Sbjct: 185 WKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQAL 244

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           DLF  M  KG  P +VTYT LIH   A  +++ A +   EM       + ++YNAL++G 
Sbjct: 245 DLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGY 304

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE-IEPD 697
           CRL RI++A  LF +M  +  LP++ TYT L+   CNA   +EA  L + M     I+PD
Sbjct: 305 CRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPD 364

Query: 698 YCTHSALLLKQLDKDYKVHAVEYLESL 724
             T+S ++         V A E+++ +
Sbjct: 365 VVTYSIVVAGYSRAKRFVEAAEFIQEM 391



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 119/408 (29%), Positives = 199/408 (48%), Gaps = 49/408 (12%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K   +E+ + +   M     +P+V   + ++  L   G   +A +++R M   G  P+
Sbjct: 199 FCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPN 258

Query: 243 IVT-----------------------------------YNTMLDSFCKEGEMQEALELLW 267
           +VT                                   YN +LD +C+ G ++EA +L  
Sbjct: 259 VVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFK 318

Query: 268 EMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM-LKLGLKVSAHSYNPIICGYSEK 326
           EM  + C P+ +TY  L+ GF     LE+AR L+ +M    G+     +Y+ ++ GYS  
Sbjct: 319 EMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRA 378

Query: 327 GLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISY 386
              VEA    +EM+ R VAP   TY+ LI GLCK GRV+ A     E+L+    PD+++Y
Sbjct: 379 KRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHA----MEVLKNVDKPDVVTY 434

Query: 387 NTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMIN 446
             ++ G C +    EA  L +E+ ++ + P+V T+N++I  LCR GD++ A +L   M  
Sbjct: 435 TIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAA 494

Query: 447 QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG--------LQPDRFAYTTQIAGE 498
            G+ P ++TYT ++ G  + G + +A E F  M RK         L P++ A++  I G 
Sbjct: 495 HGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQ-AFSALIRGL 553

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
            K  +  +A  + EE+ ++   P       +V GL + G  EEA +L+
Sbjct: 554 CKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLI 601


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  283 bits (724), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 166/513 (32%), Positives = 269/513 (52%), Gaps = 2/513 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V   +++ G   +V N N ++K    +G S KA +++ MM    + P  V+YNT+++  C
Sbjct: 116 VLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLC 175

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K   + EA EL  EM+G  C PN VT++ LI GF +NG++E+  GL+ +M K+GL+    
Sbjct: 176 KGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVF 235

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
            Y+ +I G+  KG +     L  EM+ + V P + TY+ L+  LCK  +  +A      M
Sbjct: 236 VYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTM 295

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
               V PD+++Y  L  G  ++G   +A  + D +  R   P  VTYN +I+GLC+ G +
Sbjct: 296 TGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRV 355

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK--GLQPDRFAYT 492
           + A  + E M  +G  PDV+TY+ +V G C +G +  A +  N ++ K   ++PD FA+ 
Sbjct: 356 DDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFN 415

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
             I    K      A R+   M+ +GFP +++TYN+L+ G    G L +A EL +  V  
Sbjct: 416 LVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDS 475

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
           G  P+  TYT +I+   +M  L   + LFN     G  PT+  Y  L+ +      +E A
Sbjct: 476 GISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQA 535

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
              F EM+     P+V+++N +I+G  +   ++ A  L ++M    ++P+  T++ILIN 
Sbjct: 536 RNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINR 595

Query: 673 NCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
               G   EA  LY+ M+     PD     +LL
Sbjct: 596 FLKLGQLDEAASLYERMVSCGHVPDAVLFDSLL 628



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 150/503 (29%), Positives = 249/503 (49%), Gaps = 2/503 (0%)

Query: 205 LPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALE 264
           +P   +CN +I  LR          V+  M    + P   + + +++SF    +   A  
Sbjct: 56  IPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFG 115

Query: 265 LLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYS 324
           +L  +  RG   N   +N+L+ GF ++G+  +A  L   M +  L     SYN +I G  
Sbjct: 116 VLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLC 175

Query: 325 EKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDII 384
           +   LVEA  L +EM      P   T++ LI G CK G V +      EM +  +  D+ 
Sbjct: 176 KGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVF 235

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
            Y+ L+ G+C  G+I     LF+E+  +N+ P VVTY+ L++ LC+    + A Q+ + M
Sbjct: 236 VYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTM 295

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
               + PDV+ YT++ +G  K G  S A +  + M+++G +P+   Y   I G  K G  
Sbjct: 296 TGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRV 355

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF--IPDHITYT 562
            +A  + E M  KG  PD++TY+ LV GLC +G ++EA +LL  ++   F   PD   + 
Sbjct: 356 DDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFN 415

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
            +I    +   LR  + ++  M+ +G    +VTY +LI  + + G+L  A   + +    
Sbjct: 416 LVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDS 475

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
           GI PN  TY  LINGLC+++ +  A GLF      G  P    Y  L+   C   + ++A
Sbjct: 476 GISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQA 535

Query: 683 LRLYKEMLDREIEPDYCTHSALL 705
             L++EM +   +PD  + + ++
Sbjct: 536 RNLFQEMRNANHDPDVVSFNIII 558



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 165/583 (28%), Positives = 275/583 (47%), Gaps = 83/583 (14%)

Query: 157 GILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK 216
           G+L +++  G    +++   +LLL  + +     + + +F  M RN L+PD  + N +I 
Sbjct: 115 GVLGLIMKRGFH--LNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVIN 172

Query: 217 VLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSP 276
            L      V+A+E+++ M     KP+ VT++ ++D FCK G+++E   LL EM+  G   
Sbjct: 173 GLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEG 232

Query: 277 NGVTYNVLITGFSRNGELEQARGLIRDMLK------------------------------ 306
           +   Y+ LI+GF   G++E+ + L  +ML+                              
Sbjct: 233 DVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQML 292

Query: 307 ---LGLKVSAH--SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
               G KV     +Y  +  G S+ G   +A+ + + MV RG  P   TYN +I GLCK 
Sbjct: 293 DTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKE 352

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR--------- 412
           GRV DA      M +K   PD+++Y+TL+ G C  G I EA  L + L S+         
Sbjct: 353 GRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVF 412

Query: 413 --NLV--------------------------PTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
             NLV                            +VTYN LIDG    G L  A +L ++ 
Sbjct: 413 AFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDA 472

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
           ++ GI P+  TYT+++NG CKM  LS+A+  FN+    G +P    Y T +A   +    
Sbjct: 473 VDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSV 532

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
            +A  L +EM      PD++++N+++ G  K G +E A ELL +M+    +PD+IT++ +
Sbjct: 533 EQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSIL 592

Query: 565 IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
           I+  L++G L     L+  M+  G  P  V +  L+  ++ +G+ E       +M  K +
Sbjct: 593 INRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDV 652

Query: 625 RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
             +    + ++  LC + +         D++ E ILP    +T
Sbjct: 653 VLDSKLTSTILACLCNMSK---------DVDIEKILPKFSQHT 686



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 166/373 (44%), Gaps = 39/373 (10%)

Query: 364 VSDARHRFFEMLRK--NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP----- 416
           +S++   F   L+   N IP   S NTL+    ++ +      +  ++ S ++ P     
Sbjct: 38  LSESLSHFHHTLQDYPNSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSL 97

Query: 417 ------------------------------TVVTYNTLIDGLCRYGDLEVAQQLKENMIN 446
                                          V  +N L+ G C+ GD   A  L   M  
Sbjct: 98  SALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKR 157

Query: 447 QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSE 506
             ++PD ++Y  ++NG CK   L  A+E F EM     +P+   ++  I G  K GD  E
Sbjct: 158 NCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEE 217

Query: 507 AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
            + L EEM   G   D+  Y+ L+ G C  G +E   EL  +M+     P+ +TY+ +++
Sbjct: 218 GFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMN 277

Query: 567 ASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRP 626
           A  +    +    + + M    + P +V YTVL    +  GR   A      M  +G  P
Sbjct: 278 ALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEP 337

Query: 627 NVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLY 686
           N +TYNA+INGLC+  R+D A G+   M ++G  P+  TY+ L+   C  G   EA+ L 
Sbjct: 338 NNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLL 397

Query: 687 KEMLDRE--IEPD 697
             ++ +E  I+PD
Sbjct: 398 NLLMSKEFHIKPD 410



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 144/293 (49%)

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
           N +P+  + NTLID L +    +    +   M +  + P   + + ++         S A
Sbjct: 54  NSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFA 113

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
                 ++++G   + + +   + G  + GD+ +A  L   M      PD ++YN +++G
Sbjct: 114 FGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVING 173

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           LCK   L EA EL ++M G    P+ +T++++I    + GD+  G  L   M + GL   
Sbjct: 174 LCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGD 233

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
           +  Y+ LI    ++G +E     F+EM  K + PNV+TY+ L+N LC+ ++  +A  +  
Sbjct: 234 VFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLD 293

Query: 653 DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            M    + P+   YT+L +     G   +A+++   M+ R  EP+  T++A++
Sbjct: 294 TMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAII 346


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  283 bits (723), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 179/627 (28%), Positives = 309/627 (49%), Gaps = 73/627 (11%)

Query: 171 VSIKILDLLLLIYTKKSMVEQCL-LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE 229
           V+I I + LL  + +    ++ L ++ ++    G +PDV + + ++K L D G S +A +
Sbjct: 157 VNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADD 216

Query: 230 VYRMMGEFG--IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITG 287
           + RMM E G    P++V YNT++D F KEG++ +A +L  EM  RG  P+ VTYN ++  
Sbjct: 217 LLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHA 276

Query: 288 FSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPT 347
             +   +++A   +R M+   +  +  +YN +I GYS  G   EA+ + +EM    + P 
Sbjct: 277 LCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 336

Query: 348 LATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG---------- 397
           + T ++L+  LCK+G++ +AR  F  M  K   PD+ SYN +L GY   G          
Sbjct: 337 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 396

Query: 398 ----------------------NIG---EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
                                 N G   +A ++F+E+R   + P VVTY T+I  LCR G
Sbjct: 397 LMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 456

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
            ++ A +    MI+QG+ PD   Y  ++ G C  G+L  A+E  +E++  G+  D   ++
Sbjct: 457 KMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFS 516

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
           + I    KLG   +A  + +  +  G  PD + Y++L+ G C +G +E+A  +   MV  
Sbjct: 517 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 576

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
           G  P+ + Y ++++   ++G +  G  LF  ML++G+ P+ + Y+++I      GR   A
Sbjct: 577 GIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPA 636

Query: 613 FMYFSEMQVKGI-----------------------------------RPNVITYNALING 637
            M F EM   GI                                   + N+IT N +I+G
Sbjct: 637 KMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDG 696

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           + + RR+++A  LF  +    ++PN  TY+I+I      G  +EA  ++  M +   EP+
Sbjct: 697 MFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPN 756

Query: 698 YCTHSALLLKQLDKDYKVHAVEYLESL 724
               + ++ + L K+  V A  YL  +
Sbjct: 757 SRLLNHVVRELLKKNEIVRAGAYLSKI 783



 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 162/506 (32%), Positives = 268/506 (52%), Gaps = 38/506 (7%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR-GCSPNGVTYNVLITGFSRNGELEQ 296
           G++ +I+  N +L+ FC+     EAL++L       GC P+  +Y++L+      G+  Q
Sbjct: 154 GLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQ 213

Query: 297 ARGLIRDMLKLGLKVSAH--SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           A  L+R M + G   S +  +YN +I G+ ++G + +A +L +EMV RG+ P L TYN +
Sbjct: 214 ADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSV 273

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           ++ LCK   +  A     +M+ K V+P+  +YN L+YGY  +G   EA  +F E+R  ++
Sbjct: 274 VHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI 333

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL----- 469
           +P VVT + L+  LC+YG ++ A+ + + M  +G  PDV +Y IM+NG    G L     
Sbjct: 334 LPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTD 393

Query: 470 --------SMAREF----------------------FNEMLRKGLQPDRFAYTTQIAGEL 499
                    +A +F                      FNEM   G++PD   Y T IA   
Sbjct: 394 LFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALC 453

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           ++G   +A     +M+ +G  PD   YN L+ G C  GSL +A EL+ +++ +G   D +
Sbjct: 454 RIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIV 513

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
            ++SII+   ++G +   +++F+  +  GL P  V Y++L+  +   G++E A   F  M
Sbjct: 514 FFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAM 573

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
              GI PNV+ Y  L+NG C++ RID+   LF +M + GI P+   Y+I+I+    AG  
Sbjct: 574 VSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRT 633

Query: 680 QEALRLYKEMLDREIEPDYCTHSALL 705
             A   + EM +  I  D CT++ +L
Sbjct: 634 VPAKMKFHEMTESGIAMDICTYNIVL 659



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 144/503 (28%), Positives = 251/503 (49%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y+     ++ + VF +M R+ +LPDV   + ++  L   G   +AR+V+  M   G  P 
Sbjct: 312 YSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPD 371

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           + +YN ML+ +  +G + +  +L   M G G +P+  T+NVLI  ++  G L++A  +  
Sbjct: 372 VFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFN 431

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M   G+K    +Y  +I      G + +A+    +M+ +GVAP    YN LI G C  G
Sbjct: 432 EMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHG 491

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            +  A+    E++   +  DI+ +++++   C+ G + +A  +FD   +  L P  V Y+
Sbjct: 492 SLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYS 551

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            L+DG C  G +E A ++ + M++ GI P+V+ Y  +VNG CK+G +      F EML++
Sbjct: 552 MLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQR 611

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G++P    Y+  I G  + G T  A     EM   G   D+ TYN+++ GL K    +EA
Sbjct: 612 GIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEA 671

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             L +++       + IT  ++I    +   +   +DLF ++ R  L P +VTY+++I  
Sbjct: 672 IFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITN 731

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
               G +E A   FS MQ  G  PN    N ++  L +   I +A      ++E      
Sbjct: 732 LIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLE 791

Query: 663 KYTYTILINENCNAGNWQEALRL 685
             T  +L++   + G  +E +R 
Sbjct: 792 HLTAMLLVDLFSSKGTCREQIRF 814



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/473 (28%), Positives = 226/473 (47%), Gaps = 42/473 (8%)

Query: 270 QG-RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
           QG R  SP   TY +L+   +R    E A      +L+ GL+V+    N ++ G+ E   
Sbjct: 115 QGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKR 174

Query: 329 LVEALN-LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI--PDIIS 385
             EAL+ L       G  P + +Y+IL+  LC  G+   A      M     +  P++++
Sbjct: 175 TDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVA 234

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           YNT++ G+ + G++ +A  LF E+  R + P +VTYN+++  LC+   ++ A+     M+
Sbjct: 235 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMV 294

Query: 446 NQ-----------------------------------GILPDVITYTIMVNGSCKMGNLS 470
           N+                                    ILPDV+T ++++   CK G + 
Sbjct: 295 NKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIK 354

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            AR+ F+ M  KG  PD F+Y   + G    G   +   L + ML  G  PD  T+NVL+
Sbjct: 355 EARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLI 414

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
                 G L++A  +  +M   G  PD +TY ++I A   +G +    + FN M+ +G++
Sbjct: 415 KAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVA 474

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           P    Y  LI      G L  A    SE+   G+  +++ ++++IN LC+L R+  A  +
Sbjct: 475 PDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNI 534

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD---YCT 700
           F      G+ P+   Y++L++  C  G  ++ALR++  M+   IEP+   YCT
Sbjct: 535 FDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCT 587



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/405 (31%), Positives = 198/405 (48%), Gaps = 44/405 (10%)

Query: 342 RGVAPTLATYNI-----------------------------------LIYGLCKWGRVSD 366
           R ++PT  TY I                                   L+ G C+  R  +
Sbjct: 118 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDE 177

Query: 367 A----RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV--PTVVT 420
           A     HR  E+     +PD+ SY+ LL   C  G  G+A  L   +     V  P VV 
Sbjct: 178 ALDILLHRTPEL---GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVA 234

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YNT+IDG  + GD+  A  L + M+ +GI PD++TY  +V+  CK   +  A  F  +M+
Sbjct: 235 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMV 294

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            K + P+ + Y   I G    G   EA R+ +EM      PD++T ++L+  LCK G ++
Sbjct: 295 NKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIK 354

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA ++   M   G  PD  +Y  +++     G L    DLF+ ML  G++P   T+ VLI
Sbjct: 355 EARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLI 414

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
            A+A  G L+ A + F+EM+  G++P+V+TY  +I  LCR+ ++D A   F  M ++G+ 
Sbjct: 415 KAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVA 474

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           P+KY Y  LI   C  G+  +A  L  E+++  +  D    S+++
Sbjct: 475 PDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSII 519



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 149/320 (46%), Gaps = 15/320 (4%)

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGL--------CRYGD-LEVAQQLKENMINQG--- 448
           EA  L DEL+ R         N  +  L        CR G  L VA   +     QG   
Sbjct: 60  EAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAASRAQGPRV 119

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
           + P   TY I+++   +     +A  FF ++LR GL+ +       + G  +   T EA 
Sbjct: 120 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 179

Query: 509 R-LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI--PDHITYTSII 565
             L       G  PD+ +Y++L+  LC  G   +A++LLR M   G +  P+ + Y ++I
Sbjct: 180 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 239

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
               + GD+ +  DLF  M+++G+ P LVTY  ++HA      ++ A  +  +M  K + 
Sbjct: 240 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 299

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           PN  TYN LI G     +  +A  +F +M    ILP+  T ++L+   C  G  +EA  +
Sbjct: 300 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 359

Query: 686 YKEMLDREIEPDYCTHSALL 705
           +  M  +   PD  +++ +L
Sbjct: 360 FDTMAMKGQNPDVFSYNIML 379


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  283 bits (723), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 160/514 (31%), Positives = 268/514 (52%), Gaps = 3/514 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFS---VKAREVYRMMGEFGIKPSIVTYNTMLD 251
           +FNKM R    P++  CN ++  L  +  S   V +REV++   + G++P++ T+N ++ 
Sbjct: 160 IFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIH 219

Query: 252 SFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKV 311
            +C +   +EAL L+ +M   GC P+ VTYN ++T   +  +L Q R L+  M   GL  
Sbjct: 220 GYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFP 279

Query: 312 SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRF 371
           + ++YN ++ GY +   L EA  + E M  +G+ P + TYN ++ GLC  G++ +A    
Sbjct: 280 NRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLR 339

Query: 372 FEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY 431
            +M    ++PD+++YNTL+ G         AF L +E+++R +    VT+N +I   C  
Sbjct: 340 DKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTE 399

Query: 432 GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAY 491
           G ++ A  +   M+  G  PD  TY  M+NG CK G ++ A +  +EM RKGL+ D F  
Sbjct: 400 GKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTL 459

Query: 492 TTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
            T +          +AY L  +   +G+  D +TY  L+ G  K    + A +L  +M  
Sbjct: 460 NTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKE 519

Query: 552 DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLEL 611
            G +   ITY +II      G   +  D  N +L KGL P   T  ++IH +   G +E 
Sbjct: 520 TGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEK 579

Query: 612 AFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
           AF + ++M    ++P++ T N L+ GLCR   +++   LF     +G   +  TY I+I+
Sbjct: 580 AFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIIS 639

Query: 672 ENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             C     ++A  L  EM  + +EPD  T++A++
Sbjct: 640 SFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIV 673



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 156/545 (28%), Positives = 262/545 (48%), Gaps = 11/545 (2%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           ++   ++L+  Y   +  E+ L + N+M   G  PD    N ++  L       + R++ 
Sbjct: 210 NVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLL 269

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M   G+ P+  TYN ++  +CK   ++EA E++  M G+G  P+  TYN ++ G    
Sbjct: 270 LQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDE 329

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G++++A  L   M    L     +YN +I G  E      A  L EEM  RGV     T+
Sbjct: 330 GKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTH 389

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           NI+I   C  G++ +A +   +M+     PD  +YNT++ GYC++G + EA+ + DE+  
Sbjct: 390 NIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGR 449

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           + L     T NTL+  +C    L+ A  L      +G + D +TY  ++ G  K      
Sbjct: 450 KGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADR 509

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A + + EM   G+      Y T I G    G T +A     E+L KG  PD  T N+++H
Sbjct: 510 ALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIH 569

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           G C  G++E+A +   KMV     PD  T   ++      G L +G  LFN  + KG   
Sbjct: 570 GYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPM 629

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
             VTY ++I +     RLE AF   +EM+ K + P+  TYNA++ GL +  R ++A  L 
Sbjct: 630 DTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLA 689

Query: 652 IDMEEEG-----------ILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
           +   E+G           +  +   Y+  I+  C  G +++A++L+++   + +  +  T
Sbjct: 690 LKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYT 749

Query: 701 HSALL 705
           +  L+
Sbjct: 750 YIKLM 754



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 141/478 (29%), Positives = 242/478 (50%), Gaps = 11/478 (2%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           ++L+  Y K   +++   V   M   G+LPDV   N +++ L D G   +A  +   M  
Sbjct: 285 NILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMES 344

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
           F + P +VTYNT++D   +      A +L+ EM+ RG   NGVT+N++I  F   G++++
Sbjct: 345 FKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDE 404

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  ++  M++ G      +YN +I GY + G + EA  + +EM  +G+     T N L++
Sbjct: 405 ASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLH 464

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
            +C   ++ DA     +  ++  I D ++Y TL+ GY +      A  L++E++   +V 
Sbjct: 465 TMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVA 524

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
           T++TYNT+I GLC  G  + A      ++ +G++PD  T  I+++G C  G +  A +F 
Sbjct: 525 TIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFH 584

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           N+M+   L+PD F     + G  + G   +   L    ++KG P D +TYN+++   CK 
Sbjct: 585 NKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKE 644

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG-------L 589
             LE+A +L+ +M G    PD  TY +I+    + G       L      KG        
Sbjct: 645 RRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDT 704

Query: 590 SPTLVT----YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           SP L T    Y+  I +   +G+ + A   F + + KG+  N  TY  L++GL + R+
Sbjct: 705 SPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLKRRK 762



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 167/364 (45%), Gaps = 12/364 (3%)

Query: 369 HRFF-EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL---LFDELRSRNLVPTVVTYNTL 424
           H+ F +M R    P++++ NTLL    RS +         +F +     + P V T+N L
Sbjct: 158 HQIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNIL 217

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           I G C   + E A +L   M   G  PD +TY  ++   CK   L+  R+   +M   GL
Sbjct: 218 IHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGL 277

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            P+R  Y   + G  KL    EA  + E M  KG  PD+ TYN +V GLC  G ++EA  
Sbjct: 278 FPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVR 337

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD----LFNNMLRKGLSPTLVTYTVLI 600
           L  KM     +PD +TY ++I    E     RG D    L   M  +G+    VT+ ++I
Sbjct: 338 LRDKMESFKLVPDVVTYNTLIDGCFE----HRGSDAAFKLVEEMKARGVKENGVTHNIMI 393

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                 G+++ A     +M   G  P+  TYN +ING C+  ++ +AY +  +M  +G+ 
Sbjct: 394 KWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLK 453

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
            + +T   L++  C      +A  L  +   R    D  T+  L++     +    A++ 
Sbjct: 454 LDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKL 513

Query: 721 LESL 724
            E +
Sbjct: 514 WEEM 517



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 3/152 (1%)

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHA---HAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
           G  +FN M R    P L+T   L++A     +   L  +   F +    G++PNV T+N 
Sbjct: 157 GHQIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNI 216

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
           LI+G C     ++A  L   M E G  P+  TY  ++   C      +   L  +M +  
Sbjct: 217 LIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSG 276

Query: 694 IEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
           + P+  T++ L+       +   A E +E +T
Sbjct: 277 LFPNRNTYNILVHGYCKLKWLKEAAEVIELMT 308


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  283 bits (723), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 161/445 (36%), Positives = 243/445 (54%)

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           +A + + MM E GI P I T N ML  F K   M+ A  L  EM     S    T+N+++
Sbjct: 197 EAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMV 256

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
               + G+L++AR  I  M  LG K +  SYN II GYS +G +  A  + + M  +G+ 
Sbjct: 257 NVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIE 316

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P   TY  LI G+CK GR+ +A   F +M+   ++P+ ++YNTL+ GYC  G++  AF  
Sbjct: 317 PDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSY 376

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
            DE+  + ++P+V TYN L+  L   G +  A  + + M  +GI+PD ITY I++NG  +
Sbjct: 377 RDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSR 436

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
            GN   A +  NEML KG++P    YT+ I    +     EA  L E++L +G  PD+I 
Sbjct: 437 CGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIM 496

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           +N +V G C  G++E A  LL++M      PD +T+ +++      G +   R L + M 
Sbjct: 497 FNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMK 556

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
           R+G+ P  ++Y  LI  +  RG ++ AF    EM   G  P ++TYNALI  LC+ +  D
Sbjct: 557 RRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGD 616

Query: 646 QAYGLFIDMEEEGILPNKYTYTILI 670
            A  L  +M  +GI P+  TY  LI
Sbjct: 617 LAEELLKEMVNKGISPDDSTYLSLI 641



 Score =  278 bits (710), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 179/598 (29%), Positives = 299/598 (50%), Gaps = 13/598 (2%)

Query: 45  NKDSVLNPESESYYKELIISTVEEKPWAFCNNRWVSDHFQAVVS---DPELLVRVLNRIR 101
           N +S+ + ES     E +IS       +  +++W   HF   VS    P L+  VL  + 
Sbjct: 56  NFNSLASSESTPPITEEVISK------SVLSSQW---HFIEQVSPNLTPALISNVLYNLC 106

Query: 102 EKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGL-LRSAYWVVETVVCVNMHGILD 160
            KP++   F   +       +   +   +L  L    L L+    V+ T +  N     +
Sbjct: 107 SKPQLVSDFIHHLHPHCLDTKSYCLAVVLLARLPSPKLALQLLKQVMGTRIATNRELFDE 166

Query: 161 VLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRD 220
           + +     S  S  + DLL+ +  +    ++    F  M   G++P ++ CN ++ +   
Sbjct: 167 LTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLK 226

Query: 221 NGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVT 280
                 A  +Y  M    I  ++ T+N M++  CKEG++++A E +  M+G G  PN V+
Sbjct: 227 LNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVS 286

Query: 281 YNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV 340
           YN +I G+S  G +E AR ++  M   G++  +++Y  +I G  ++G L EA  L ++MV
Sbjct: 287 YNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMV 346

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
             G+ P   TYN LI G C  G +  A     EM++K ++P + +YN L++     G +G
Sbjct: 347 EIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMG 406

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           EA  +  E+R + ++P  +TYN LI+G  R G+ + A  L   M+++GI P  +TYT ++
Sbjct: 407 EADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLI 466

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
               +   +  A + F ++L +G+ PD   +   + G    G+   A+ L +EM  K  P
Sbjct: 467 YVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVP 526

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           PD +T+N L+ G C+ G +EEA  LL +M   G  PDHI+Y ++I      GD++    +
Sbjct: 527 PDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRV 586

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
            + ML  G +PTL+TY  LI         +LA     EM  KGI P+  TY +LI G+
Sbjct: 587 RDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 644



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 150/469 (31%), Positives = 243/469 (51%), Gaps = 1/469 (0%)

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
             +K SIV ++ ++   C+     EA +  + M+ +G  P   T N +++ F +   +E 
Sbjct: 174 LSVKSSIV-FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEM 232

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  L  +M +L +  + +++N ++    ++G L +A      M   G  P + +YN +I+
Sbjct: 233 AWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIH 292

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           G    G +  AR     M  K + PD  +Y +L+ G C+ G + EA  LFD++    LVP
Sbjct: 293 GYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVP 352

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
             VTYNTLIDG C  GDLE A   ++ M+ +GI+P V TY ++V+     G +  A +  
Sbjct: 353 NAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMI 412

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
            EM +KG+ PD   Y   I G  + G+  +A+ L  EML+KG  P  +TY  L++ L + 
Sbjct: 413 KEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRR 472

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
             ++EA++L  K++  G  PD I + +++      G++ R   L   M RK + P  VT+
Sbjct: 473 NRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTF 532

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
             L+      G++E A M   EM+ +GI+P+ I+YN LI+G  R   I  A+ +  +M  
Sbjct: 533 NTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLS 592

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            G  P   TY  LI   C       A  L KEM+++ I PD  T+ +L+
Sbjct: 593 IGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLI 641



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 120/361 (33%), Positives = 197/361 (54%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y+ +  +E    + + M   G+ PD      +I  +   G   +A  ++  M E G+ P+
Sbjct: 294 YSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPN 353

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            VTYNT++D +C +G+++ A     EM  +G  P+  TYN+L+      G + +A  +I+
Sbjct: 354 AVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIK 413

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M K G+   A +YN +I GYS  G   +A +L  EM+++G+ PT  TY  LIY L +  
Sbjct: 414 EMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRN 473

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R+ +A   F ++L + V PD+I +N ++ G+C +GN+  AF+L  E+  +++ P  VT+N
Sbjct: 474 RMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFN 533

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           TL+ G CR G +E A+ L + M  +GI PD I+Y  +++G  + G++  A    +EML  
Sbjct: 534 TLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSI 593

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G  P    Y   I    K  +   A  L +EM+ KG  PD  TY  L+ G+  + +L E 
Sbjct: 594 GFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVED 653

Query: 543 N 543
           N
Sbjct: 654 N 654


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  282 bits (722), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 158/496 (31%), Positives = 263/496 (53%), Gaps = 9/496 (1%)

Query: 222 GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY 281
            FSV  R +     +FG +P+ +T++T+++ FC EG + EA+ L+  M      PN VT 
Sbjct: 123 AFSVVGRAL-----KFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTV 177

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
           N LI G    G + +A  LI  M+K G + +  +Y P++    + G    AL+L  +M  
Sbjct: 178 NTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEE 237

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
           R +  ++  Y+I+I  LCK G + DA   F EM  K +  D+++Y++++ G C  G   +
Sbjct: 238 RSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDD 297

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
              +  E+  RN++P VVT++ LID   + G L  A++L   M+ +GI PD ITY+ +++
Sbjct: 298 GAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLID 357

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
           G CK   L  A +  + M+ KG +P+   Y+  I    K        RL  E+ +KG   
Sbjct: 358 GFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVA 417

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           D +TYN LV G C+ G L  A EL ++MV  G  P  +TY  ++    + G+L++  ++F
Sbjct: 418 DTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIF 477

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
             M +  +   +  Y ++IH      +++ A+  F  + VKG++P+V+TYN +I GLC+ 
Sbjct: 478 EKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKK 537

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
             + +A  LF  M+E+G  P+  TY ILI  +        ++ L +EM  R    D  T 
Sbjct: 538 GSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTI 597

Query: 702 SALLL----KQLDKDY 713
             +++     +LDK +
Sbjct: 598 KMVVVMLSDGRLDKTF 613



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 147/545 (26%), Positives = 290/545 (53%), Gaps = 14/545 (2%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF-------GIKP 241
           V + + +F  M+++  LP + + +++         +V  R+ Y ++  F       GI+ 
Sbjct: 50  VNEAIDLFESMIQSRPLPSLIDFSKLFS-------AVARRKEYDLVLGFCKEMDLNGIEH 102

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
           ++ T N M++ FC++ ++  A  ++      G  PN +T++ LI GF   G + +A  L+
Sbjct: 103 NMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALV 162

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
             M+++  + +  + N +I G   KG + EAL L + MV  G      TY  ++  +CK 
Sbjct: 163 DRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKS 222

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           G  + A   F +M  +++   ++ Y+ ++   C+ GN+ +A  LF+E+  + +   VV Y
Sbjct: 223 GNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAY 282

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           +++I GLC  G  +   ++   MI + I+P+V+T++ +++   K G L  A+E +NEM+ 
Sbjct: 283 SSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVA 342

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
           +G+ PD   Y++ I G  K     EA ++ + M++KG  P+++TY++L++  CK   ++ 
Sbjct: 343 RGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDN 402

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
              L  ++   G + D +TY +++    + G L   ++LF  M+ +G+ P++VTY +L+ 
Sbjct: 403 GMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLD 462

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
                G L+ A   F +MQ   +   +  YN +I+G+C   ++D A+ LF  +  +G+ P
Sbjct: 463 GLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKP 522

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYL 721
           +  TY ++I   C  G+  EA  L+++M +    P  CT++ L+   L     + +VE +
Sbjct: 523 DVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELI 582

Query: 722 ESLTL 726
           E + +
Sbjct: 583 EEMKM 587



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 142/465 (30%), Positives = 244/465 (52%), Gaps = 10/465 (2%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR-----EV 230
           +++++  + +K  +     V  + L+ G  P+    + +I     NGF ++ R      +
Sbjct: 107 MNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLI-----NGFCLEGRVSEAVAL 161

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
              M E   +P++VT NT+++  C +G + EAL L+  M   GC  N +TY  ++    +
Sbjct: 162 VDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCK 221

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
           +G    A  L R M +  +K S   Y+ +I    + G L +AL+L  EM  +G+   +  
Sbjct: 222 SGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVA 281

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           Y+ +I GLC  GR  D      EM+ +N+IP++++++ L+  + + G + EA  L++E+ 
Sbjct: 282 YSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMV 341

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
           +R + P  +TY++LIDG C+   L  A Q+ + M+++G  P+++TY+I++N  CK   + 
Sbjct: 342 ARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVD 401

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
                F E+  KGL  D   Y T + G  + G  + A  L +EM+++G PP ++TY +L+
Sbjct: 402 NGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILL 461

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
            GLC  G L++A E+  KM     I     Y  IIH       +     LF ++  KG+ 
Sbjct: 462 DGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVK 521

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALI 635
           P ++TY V+I     +G L  A M F +M+  G  P+  TYN LI
Sbjct: 522 PDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILI 566



 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 132/451 (29%), Positives = 236/451 (52%)

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           I  + V+Y   L +   + ++ EA++L   M      P+ + ++ L +  +R  E +   
Sbjct: 30  ISEAKVSYKERLRNGIVDIKVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVL 89

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
           G  ++M   G++ + ++ N +I  +  K  L+ A ++    +  G  P   T++ LI G 
Sbjct: 90  GFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGF 149

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C  GRVS+A      M+     P++++ NTL+ G C  G + EA +L D +         
Sbjct: 150 CLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANE 209

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           +TY  +++ +C+ G+  +A  L   M  + I   V+ Y+I+++  CK GNL  A   FNE
Sbjct: 210 ITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNE 269

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M  KG++ D  AY++ I G    G   +  ++  EM+ +   P+++T++ L+    K G 
Sbjct: 270 MEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGK 329

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           L EA EL  +MV  G  PD ITY+S+I    +   L     + + M+ KG  P +VTY++
Sbjct: 330 LLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSI 389

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           LI+++    R++     F E+  KG+  + +TYN L+ G C+  +++ A  LF +M   G
Sbjct: 390 LINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRG 449

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           + P+  TY IL++  C+ G  Q+AL ++++M
Sbjct: 450 VPPSVVTYGILLDGLCDNGELQKALEIFEKM 480



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 175/348 (50%), Gaps = 15/348 (4%)

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           L  +  +S+A+  + E LR N I DI               + EA  LF+ +     +P+
Sbjct: 24  LLHYSCISEAKVSYKERLR-NGIVDI--------------KVNEAIDLFESMIQSRPLPS 68

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           ++ ++ L   + R  + ++     + M   GI  ++ T  IM+N  C+   L  A     
Sbjct: 69  LIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVG 128

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
             L+ G +P+   ++T I G    G  SEA  L + M+   + P+++T N L++GLC  G
Sbjct: 129 RALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKG 188

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            + EA  L+ +MV  G   + ITY  +++   + G+     DLF  M  + +  ++V Y+
Sbjct: 189 RVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYS 248

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           ++I +    G L+ A   F+EM++KGI+ +V+ Y+++I GLC   R D    +  +M   
Sbjct: 249 IVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGR 308

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            I+PN  T++ LI+     G   EA  LY EM+ R I PD  T+S+L+
Sbjct: 309 NIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLI 356



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 102/198 (51%), Gaps = 2/198 (1%)

Query: 158 ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
           +LD+++  G     +I    +L+  Y K   V+  + +F ++   GL+ D    N +++ 
Sbjct: 371 MLDLMVSKGCEP--NIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQG 428

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
              +G    A+E+++ M   G+ PS+VTY  +LD  C  GE+Q+ALE+  +MQ       
Sbjct: 429 FCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILG 488

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
              YN++I G     +++ A  L   +   G+K    +YN +I G  +KG L EA  L  
Sbjct: 489 IGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFR 548

Query: 338 EMVTRGVAPTLATYNILI 355
           +M   G AP+  TYNILI
Sbjct: 549 KMKEDGCAPSDCTYNILI 566



 Score = 43.9 bits (102), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 1/127 (0%)

Query: 171 VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV 230
           + I I ++++      S V+    +F  +   G+ PDV   N +I  L   G   +A  +
Sbjct: 487 LGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADML 546

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
           +R M E G  PS  TYN ++ +      +  ++EL+ EM+ RG + +  T  +++   S 
Sbjct: 547 FRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMVVVMLS- 605

Query: 291 NGELEQA 297
           +G L++ 
Sbjct: 606 DGRLDKT 612


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  282 bits (722), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 166/515 (32%), Positives = 267/515 (51%), Gaps = 1/515 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG-FSVKAREVYRMMGEFGIKPSIVTYN 247
           ++  L  FN ML    LP +    +++  +   G +      + + M   G+ P+I T +
Sbjct: 78  IDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLS 137

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
            +++ F     +  A  +L ++   G  P  VT+  LI    + G+  QA  L  DM+  
Sbjct: 138 ILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVAR 197

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           G +   ++Y  II G  + G    A  L ++M   G  P + TY+ +I    K  RV++A
Sbjct: 198 GCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEA 257

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
              F  M  K + PDI +YN+L+ G C      EA  L +E+RS N++P +VT+N L+D 
Sbjct: 258 LDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDT 317

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           +C+ G +  AQ + + M   G+ PDV+TY+ ++ G      +  AR+ F+ M+ KG +PD
Sbjct: 318 ICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPD 377

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
            F+Y   I G  K+    EA +L  EM+ +G  P+ ++YN L+HGLC+LGSL EA  L +
Sbjct: 378 VFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFK 437

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
            M  +G +P+  TY+ ++    + G   +   LF  M      P LV Y +LI A    G
Sbjct: 438 NMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSG 497

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
            L  A   FSE+ VKG++PN   Y  +INGLC+   +D+A   F +MEE+G  P++ +Y 
Sbjct: 498 NLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYN 557

Query: 668 ILINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
           ++I    +  +   A++L  EM D+    D  T +
Sbjct: 558 VIIRGFLHHKDESRAVQLIGEMRDKGFIADVGTTA 592



 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 145/482 (30%), Positives = 261/482 (54%), Gaps = 1/482 (0%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEA-LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
           P I+ +  +L +  K G+  +  + L  +M+  G SPN  T ++LI  FS    ++ A  
Sbjct: 95  PCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFS 154

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
           ++  ++KLGL+ +  ++  +I    + G   +A+ L ++MV RG  P + TY  +I GLC
Sbjct: 155 VLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLC 214

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
           K G  + A     +M      P++++Y+T++  + +   + EA  +F  ++ + + P + 
Sbjct: 215 KIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIF 274

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
           TYN+LI GLC +   + A  L   M +  I+PD++T+ ++V+  CK G +S A+     M
Sbjct: 275 TYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTM 334

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
              G++PD   Y++ + G     +  EA +L + M+ KG  PD+ +YN+L++G CK+  +
Sbjct: 335 TEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRI 394

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           +EA +L  +M+  G  P++++Y ++IH   ++G LR  R+LF NM   G  P L TY++L
Sbjct: 395 DEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSIL 454

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           +     +G    AF  F  MQ    +PN++ YN LI+ +C+   +  A  LF ++  +G+
Sbjct: 455 LDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGL 514

Query: 660 LPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVE 719
            PN   YT +IN  C  G   EAL  ++ M +    PD  +++ ++   L    +  AV+
Sbjct: 515 QPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQ 574

Query: 720 YL 721
            +
Sbjct: 575 LI 576



 Score =  246 bits (627), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 145/466 (31%), Positives = 239/466 (51%), Gaps = 2/466 (0%)

Query: 165 GGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS 224
            GLS   +I  L +L+  ++    V+    V  K+++ GL P +     +I  L   G  
Sbjct: 127 AGLSP--NIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKF 184

Query: 225 VKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVL 284
            +A E++  M   G +P + TY T+++  CK GE   A  LL +M+  GC PN VTY+ +
Sbjct: 185 AQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTI 244

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           I    ++  + +A  +   M   G+     +YN +I G        EA  L  EM +  +
Sbjct: 245 IDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNI 304

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
            P + T+N+L+  +CK G+VS+A+     M    V PD+++Y++L+YGY     + EA  
Sbjct: 305 MPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARK 364

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
           LFD + ++   P V +YN LI+G C+   ++ A+QL   MI+QG+ P+ ++Y  +++G C
Sbjct: 365 LFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLC 424

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
           ++G+L  AR  F  M   G  P+ F Y+  + G  K G   +A+RL   M +    P+L+
Sbjct: 425 QLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLV 484

Query: 525 TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM 584
            YN+L+  +CK G+L +A +L  ++   G  P+   YT+II+   + G L    + F NM
Sbjct: 485 MYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNM 544

Query: 585 LRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
              G  P  ++Y V+I           A     EM+ KG   +V T
Sbjct: 545 EEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGT 590



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 86/281 (30%), Positives = 144/281 (51%), Gaps = 1/281 (0%)

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN-LSMAREFFNEMLRKGL 484
           D  C + +++ A     +M+++  LP +I +T +++   KMG           +M   GL
Sbjct: 70  DDACSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGL 129

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            P+ +  +  I     L     A+ +  +++  G  P ++T+  L++ LCK+G   +A E
Sbjct: 130 SPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAME 189

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           L   MV  G  PD  TYT+II+   ++G+      L   M   G  P +VTY+ +I +H 
Sbjct: 190 LFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHR 249

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
              R+  A   FS M+VKGI P++ TYN+LI GLC   +  +A  L  +M    I+P+  
Sbjct: 250 KDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIV 309

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           T+ +L++  C  G   EA  + K M +  +EPD  T+S+L+
Sbjct: 310 TFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLM 350


>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
          Length = 933

 Score =  282 bits (722), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 184/620 (29%), Positives = 301/620 (48%), Gaps = 74/620 (11%)

Query: 157 GILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK 216
           G+LD++   G+    ++      ++ Y +   VE+   ++  M+RNG+L DV   + ++ 
Sbjct: 225 GVLDMMKEAGVDP--NVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVA 282

Query: 217 VL-RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGC- 274
            L RD  FS +A  ++R M + G  P+ VTY T++DS  K G  +E L LL EM  RG  
Sbjct: 283 GLCRDGRFS-EAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVV 341

Query: 275 ----------------------------------SPNGVTYNVLITGFSRNGELEQARGL 300
                                             S NGVTY VLI    +   +++A  +
Sbjct: 342 MDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQV 401

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           + +M +  +  +  +++ +I G+ ++GLL +A   +  M  RG+ P + TY  LI G  K
Sbjct: 402 LLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFK 461

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
           +     A   + +ML + V  +    ++L+ G  ++G I EA  LF +     L    V 
Sbjct: 462 FQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVN 521

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y TLIDGL + GD+  A +  + ++++ +LPD + Y + +N  C +G    A+    EM 
Sbjct: 522 YTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMR 581

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
             GL+PD+  Y T I    + G+T++A +L  EM      P+LITYN LV GL   G++E
Sbjct: 582 NMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVE 641

Query: 541 EANELLRKMVGDGFIPDHITYTSI------------------------IHASLEM----- 571
           +A  LL +MV  GF P  +T+  +                        +HA + +     
Sbjct: 642 KAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLL 701

Query: 572 ------GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
                 G  R+   +   ML  G++P  +T+  LI  H     L+ AF  +++M  + I 
Sbjct: 702 QVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNIS 761

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           PN+ T+N L+ GL  + RI +A  + I+ME+ G+ PN  TY IL+  +    N  EA+RL
Sbjct: 762 PNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRL 821

Query: 686 YKEMLDREIEPDYCTHSALL 705
           Y EM+ +   P   T++AL+
Sbjct: 822 YCEMVGKGFVPKVSTYNALI 841



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 156/514 (30%), Positives = 246/514 (47%), Gaps = 3/514 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
            EQ LL   +M    + P+V   + +I      G   KA E  RMM E GI P++VTY T
Sbjct: 398 AEQVLL---EMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGT 454

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++D F K      ALE+  +M   G   N    + L+ G  +NG++E+A  L +D    G
Sbjct: 455 LIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSG 514

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           L +   +Y  +I G  + G +  A    +E++ R + P    YN+ I  LC  G+  +A+
Sbjct: 515 LSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAK 574

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               EM    + PD  +YNT++  +CR G   +A  L  E++  ++ P ++TYNTL+ GL
Sbjct: 575 SILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGL 634

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
              G +E A+ L   M++ G  P  +T+  ++    +   L +  +    M+  GL  D 
Sbjct: 635 FGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADI 694

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             Y T +      G T +A  + EEML  G  PD IT+N L+ G CK   L+ A     +
Sbjct: 695 TVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQ 754

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M+     P+  T+ +++     +G +     +   M + GL P  +TY +L+  H  +  
Sbjct: 755 MLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSN 814

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
              A   + EM  KG  P V TYNALI+   +   + QA  LF DM++ G+ P   TY I
Sbjct: 815 KVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDI 874

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
           L++      N  E  +  K+M ++   P   T S
Sbjct: 875 LVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLS 908



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 160/594 (26%), Positives = 275/594 (46%), Gaps = 41/594 (6%)

Query: 164 GGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGF 223
           GGG+ + + +   + L+  Y +       L V ++M   GL  DV   N ++      G 
Sbjct: 161 GGGIHA-LDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQ 219

Query: 224 SVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNV 283
              AR V  MM E G+ P++ TY   +  +C+   ++EA +L   M   G   + VT + 
Sbjct: 220 VDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSA 279

Query: 284 LITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG 343
           L+ G  R+G   +A  L R+M K+G   +  +Y  +I   ++ G   E L+L  EMV+RG
Sbjct: 280 LVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRG 339

Query: 344 VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF 403
           V   L TY  L+  L K G+  + +      L  N+  + ++Y  L+   C++ N+ EA 
Sbjct: 340 VVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAE 399

Query: 404 LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
            +  E+  +++ P VVT++++I+G  + G L+ A + K  M  +GI P+V+TY  +++G 
Sbjct: 400 QVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGF 459

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
            K      A E +++ML +G++ ++F   + + G  + G   EA  L ++    G   D 
Sbjct: 460 FKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDH 519

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
           + Y  L+ GL K G +  A +  ++++    +PD + Y   I+    +G  +  + +   
Sbjct: 520 VNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTE 579

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           M   GL P   TY  +I +H  +G    A     EM++  I+PN+ITYN L+ GL     
Sbjct: 580 MRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGA 639

Query: 644 IDQAYGLFIDMEEEGILPNKYT-----------------------------------YTI 668
           +++A  L  +M   G  P+  T                                   Y  
Sbjct: 640 VEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNT 699

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL-----KQLDKDYKVHA 717
           L+   C  G  ++A  + +EML   I PD  T +AL+L       LD  +  +A
Sbjct: 700 LLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYA 753



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 143/535 (26%), Positives = 243/535 (45%), Gaps = 39/535 (7%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P     N ++  L D+     A  V   M + G+    VT NT+L   C+ G++ +A   
Sbjct: 101 PTTVAYNILLAALSDH---AHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQV-DAAAA 156

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           L +  G   + + + +N LI G+ R G+   A  +   M   GL +    YN ++ G+  
Sbjct: 157 LADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCR 216

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
            G +  A  + + M   GV P +ATY   I   C+   V +A   +  M+R  V+ D+++
Sbjct: 217 AGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVT 276

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
            + L+ G CR G   EA+ LF E+     VP  VTY TLID L + G  +    L   M+
Sbjct: 277 LSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMV 336

Query: 446 NQGILPDV-----------------------------------ITYTIMVNGSCKMGNLS 470
           ++G++ D+                                   +TYT++++  CK  N+ 
Sbjct: 337 SRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVD 396

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            A +   EM  K + P+   +++ I G +K G   +A   +  M  +G  P+++TY  L+
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLI 456

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
            G  K    + A E+   M+ +G   +     S+++   + G +     LF +    GLS
Sbjct: 457 DGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLS 516

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
              V YT LI      G +  AF +  E+  + + P+ + YN  IN LC L +  +A  +
Sbjct: 517 LDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSI 576

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             +M   G+ P++ TY  +I  +C  G   +AL+L  EM    I+P+  T++ L+
Sbjct: 577 LTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLV 631



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 123/388 (31%), Positives = 196/388 (50%), Gaps = 1/388 (0%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           M RN +LPD    N  I  L   G   +A+ +   M   G+KP   TYNTM+ S C++GE
Sbjct: 546 MDRN-MLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGE 604

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
             +AL+LL EM+     PN +TYN L+ G    G +E+A+ L+ +M+  G   S+ ++  
Sbjct: 605 TAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRR 664

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           ++   S+   L   L++ E M+  G+   +  YN L+  LC  G    A     EML   
Sbjct: 665 VLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSG 724

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
           + PD I++N L+ G+C+S ++  AF  + ++  +N+ P + T+NTL+ GL   G +  A 
Sbjct: 725 IAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAG 784

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
            +   M   G+ P+ +TY I+V G  K  N   A   + EM+ KG  P    Y   I+  
Sbjct: 785 TVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDF 844

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
            K G  ++A  L ++M  +G  P   TY++LV G  ++ +  E  + L+ M   GF P  
Sbjct: 845 TKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSK 904

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLR 586
            T + I  A  + G   + + L  N+ R
Sbjct: 905 GTLSFICRAFSKPGMTWQAQRLLKNLYR 932



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 165/390 (42%), Gaps = 71/390 (18%)

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL--------------VPTV--------- 418
           D  S N LLY +CR   +  A  L    R   +               P V         
Sbjct: 72  DPASLNALLYSHCRLRLLRPAIALLRSSRPTTVAYNILLAALSDHAHAPAVLAEMCKRGV 131

Query: 419 ----VTYNTLIDGLCRYGDLEVAQQL---------------------------------- 440
               VT NTL+ GLCR G ++ A  L                                  
Sbjct: 132 PFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSV 191

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
            + M  QG+  DV+ Y  +V G C+ G +  AR   + M   G+ P+   YT  I    +
Sbjct: 192 ADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCR 251

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
                EA+ L E M+  G   D++T + LV GLC+ G   EA  L R+M   G +P+H+T
Sbjct: 252 TKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVT 311

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE-----LAFMY 615
           Y ++I +  + G  +    L   M+ +G+   LVTYT L+     +G+ +     L F  
Sbjct: 312 YCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFAL 371

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
              + + G     +TY  LI+ LC+   +D+A  + ++MEE+ I PN  T++ +IN    
Sbjct: 372 SDNLSLNG-----VTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVK 426

Query: 676 AGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            G   +A    + M +R I P+  T+  L+
Sbjct: 427 RGLLDKATEYKRMMKERGINPNVVTYGTLI 456



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 132/284 (46%), Gaps = 17/284 (5%)

Query: 95  RVLNRIREKPR--IALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVC 152
           RVL    +  R  + L    W+    G+  D  V+ T+L++L   G+ R A  V+E    
Sbjct: 664 RVLQACSQSRRLDVILDIHEWM-MNAGLHADITVYNTLLQVLCYHGMTRKATVVLEE--- 719

Query: 153 VNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCN 212
                    ++G G++        + L+L + K S ++     + +ML   + P++   N
Sbjct: 720 ---------MLGSGIAP--DTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFN 768

Query: 213 RIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR 272
            ++  L   G   +A  V   M + G++P+ +TY+ ++    K+    EA+ L  EM G+
Sbjct: 769 TLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGK 828

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA 332
           G  P   TYN LI+ F++ G + QA+ L +DM K G+  ++ +Y+ ++ G+S      E 
Sbjct: 829 GFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEV 888

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
               ++M  +G +P+  T + +     K G    A+     + R
Sbjct: 889 KKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNLYR 932



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 88/217 (40%), Gaps = 36/217 (16%)

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII-------HASLEMG 572
           P D  + N L++  C+L  L  A  LLR        P  + Y  ++       HA   + 
Sbjct: 70  PADPASLNALLYSHCRLRLLRPAIALLRSSR-----PTTVAYNILLAALSDHAHAPAVLA 124

Query: 573 DL-RRG--------RDLFNNMLRKGL---------------SPTLVTYTVLIHAHAARGR 608
           ++ +RG          L   + R G                +  ++ +  LI  +   G 
Sbjct: 125 EMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIAGYCRVGD 184

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
              A      M  +G+  +V+ YN L+ G CR  ++D A G+   M+E G+ PN  TYT 
Sbjct: 185 TPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTP 244

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            I   C     +EA  LY+ M+   +  D  T SAL+
Sbjct: 245 FIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALV 281



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/131 (23%), Positives = 71/131 (54%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           D+L+  + K+S   + + ++ +M+  G +P V   N +I      G   +A+E+++ M +
Sbjct: 803 DILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQK 862

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G+ P+  TY+ ++  + +     E  + L +M+ +G SP+  T + +   FS+ G   Q
Sbjct: 863 RGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQ 922

Query: 297 ARGLIRDMLKL 307
           A+ L++++ ++
Sbjct: 923 AQRLLKNLYRV 933


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  282 bits (722), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 161/445 (36%), Positives = 243/445 (54%)

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           +A + + MM E GI P I T N ML  F K   M+ A  L  EM     S    T+N+++
Sbjct: 175 EAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMV 234

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
               + G+L++AR  I  M  LG K +  SYN II GYS +G +  A  + + M  +G+ 
Sbjct: 235 NVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIE 294

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P   TY  LI G+CK GR+ +A   F +M+   ++P+ ++YNTL+ GYC  G++  AF  
Sbjct: 295 PDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSY 354

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
            DE+  + ++P+V TYN L+  L   G +  A  + + M  +GI+PD ITY I++NG  +
Sbjct: 355 RDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSR 414

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
            GN   A +  NEML KG++P    YT+ I    +     EA  L E++L +G  PD+I 
Sbjct: 415 CGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIM 474

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           +N +V G C  G++E A  LL++M      PD +T+ +++      G +   R L + M 
Sbjct: 475 FNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMK 534

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
           R+G+ P  ++Y  LI  +  RG ++ AF    EM   G  P ++TYNALI  LC+ +  D
Sbjct: 535 RRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGD 594

Query: 646 QAYGLFIDMEEEGILPNKYTYTILI 670
            A  L  +M  +GI P+  TY  LI
Sbjct: 595 LAEELLKEMVNKGISPDDSTYLSLI 619



 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 179/598 (29%), Positives = 299/598 (50%), Gaps = 13/598 (2%)

Query: 45  NKDSVLNPESESYYKELIISTVEEKPWAFCNNRWVSDHFQAVVS---DPELLVRVLNRIR 101
           N +S+ + ES     E +IS       +  +++W   HF   VS    P L+  VL  + 
Sbjct: 34  NFNSLASSESTPPITEEVISK------SVLSSQW---HFIEQVSPNLTPALISNVLYNLC 84

Query: 102 EKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGL-LRSAYWVVETVVCVNMHGILD 160
            KP++   F   +       +   +   +L  L    L L+    V+ T +  N     +
Sbjct: 85  SKPQLVSDFIHHLHPHCLDTKSYCLAVVLLARLPSPKLALQLLKQVMGTRIATNRELFDE 144

Query: 161 VLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRD 220
           + +     S  S  + DLL+ +  +    ++    F  M   G++P ++ CN ++ +   
Sbjct: 145 LTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLK 204

Query: 221 NGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVT 280
                 A  +Y  M    I  ++ T+N M++  CKEG++++A E +  M+G G  PN V+
Sbjct: 205 LNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVS 264

Query: 281 YNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV 340
           YN +I G+S  G +E AR ++  M   G++  +++Y  +I G  ++G L EA  L ++MV
Sbjct: 265 YNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMV 324

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
             G+ P   TYN LI G C  G +  A     EM++K ++P + +YN L++     G +G
Sbjct: 325 EIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMG 384

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           EA  +  E+R + ++P  +TYN LI+G  R G+ + A  L   M+++GI P  +TYT ++
Sbjct: 385 EADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLI 444

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
               +   +  A + F ++L +G+ PD   +   + G    G+   A+ L +EM  K  P
Sbjct: 445 YVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVP 504

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           PD +T+N L+ G C+ G +EEA  LL +M   G  PDHI+Y ++I      GD++    +
Sbjct: 505 PDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRV 564

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
            + ML  G +PTL+TY  LI         +LA     EM  KGI P+  TY +LI G+
Sbjct: 565 RDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 622



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 150/469 (31%), Positives = 243/469 (51%), Gaps = 1/469 (0%)

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
             +K SIV ++ ++   C+     EA +  + M+ +G  P   T N +++ F +   +E 
Sbjct: 152 LSVKSSIV-FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEM 210

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  L  +M +L +  + +++N ++    ++G L +A      M   G  P + +YN +I+
Sbjct: 211 AWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIH 270

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           G    G +  AR     M  K + PD  +Y +L+ G C+ G + EA  LFD++    LVP
Sbjct: 271 GYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVP 330

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
             VTYNTLIDG C  GDLE A   ++ M+ +GI+P V TY ++V+     G +  A +  
Sbjct: 331 NAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMI 390

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
            EM +KG+ PD   Y   I G  + G+  +A+ L  EML+KG  P  +TY  L++ L + 
Sbjct: 391 KEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRR 450

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
             ++EA++L  K++  G  PD I + +++      G++ R   L   M RK + P  VT+
Sbjct: 451 NRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTF 510

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
             L+      G++E A M   EM+ +GI+P+ I+YN LI+G  R   I  A+ +  +M  
Sbjct: 511 NTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLS 570

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            G  P   TY  LI   C       A  L KEM+++ I PD  T+ +L+
Sbjct: 571 IGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLI 619



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 120/361 (33%), Positives = 197/361 (54%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y+ +  +E    + + M   G+ PD      +I  +   G   +A  ++  M E G+ P+
Sbjct: 272 YSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPN 331

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            VTYNT++D +C +G+++ A     EM  +G  P+  TYN+L+      G + +A  +I+
Sbjct: 332 AVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIK 391

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M K G+   A +YN +I GYS  G   +A +L  EM+++G+ PT  TY  LIY L +  
Sbjct: 392 EMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRN 451

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R+ +A   F ++L + V PD+I +N ++ G+C +GN+  AF+L  E+  +++ P  VT+N
Sbjct: 452 RMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFN 511

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           TL+ G CR G +E A+ L + M  +GI PD I+Y  +++G  + G++  A    +EML  
Sbjct: 512 TLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSI 571

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G  P    Y   I    K  +   A  L +EM+ KG  PD  TY  L+ G+  + +L E 
Sbjct: 572 GFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVED 631

Query: 543 N 543
           N
Sbjct: 632 N 632


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  282 bits (722), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 171/588 (29%), Positives = 286/588 (48%), Gaps = 65/588 (11%)

Query: 193 LLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDS 252
           LL+F+ ++   + PD+   + +++ L +     KA+E+   M     K SIV YN ++  
Sbjct: 116 LLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHG 175

Query: 253 FCKEGEMQEALE--------------------------LLWEMQGRGCSPNGVTYNVLIT 286
            CK   + EALE                          L  EM  +G   N +TY++LI 
Sbjct: 176 LCKSRRIWEALEIKNCLMQKGLEANVVTYYGKFNEAELLFKEMGEKGLCANHITYSILID 235

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
            F R GE++ A G +  M K  ++ + + YN +I GY + G    A    +EM+ +G+ P
Sbjct: 236 SFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTP 295

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
           T+ TY  LI G C  G    A   + EM  K + P+  ++  ++ G CR+  + EA  LF
Sbjct: 296 TVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLF 355

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
            E++ R ++P+ VTYN +I+G CR G++  A  L + M+ +G +PD  TY  +++G C +
Sbjct: 356 GEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSV 415

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G +S A+EF +++ +   + +   Y+  + G  K G   +A      M+ +G   DL+ Y
Sbjct: 416 GRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCY 475

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
            +L+ G  +         LL++M   G  PD + YT++I    + G+L+    L++ M+ 
Sbjct: 476 AILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVD 535

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY--------------- 631
           +G  P +VTYT LI+     G ++ A +   E  V  + PN ITY               
Sbjct: 536 EGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEK 595

Query: 632 -------------------NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
                              N LI G CRL +I++A  L   M +  ILP+  TY+ +I E
Sbjct: 596 AVQLHHAMLKGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYE 655

Query: 673 NCNAGNWQEALRLYKEMLDREIEPD-----YCTHSALLLKQLDKDYKV 715
            C   N QEA++L+  MLD+ ++PD     +  H   +  +L+K +++
Sbjct: 656 QCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFEL 703



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 160/565 (28%), Positives = 279/565 (49%), Gaps = 45/565 (7%)

Query: 171 VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV 230
           +SI + ++L+    K   + + L + N +++ GL  +V        V     F+ +A  +
Sbjct: 164 LSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANV--------VTYYGKFN-EAELL 214

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
           ++ MGE G+  + +TY+ ++DSFC+ GEM  A+  L +M           YN LI G+ +
Sbjct: 215 FKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCK 274

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
            G    A+    +M+  GL  +  +Y  +I GY  +G   +A  +  EM  +G++P   T
Sbjct: 275 LGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYT 334

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           +  +I GLC+   +++A   F EM  + ++P  ++YN ++ G+CRSGNI EAF L DE+ 
Sbjct: 335 FTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMV 394

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN--------------------------- 443
            +  VP   TY  LI GLC  G +  A++  ++                           
Sbjct: 395 GKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFK 454

Query: 444 --------MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
                   M+ +G+  D++ Y I+++G+ +  +         EM   GL+PD   YT  I
Sbjct: 455 DAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMI 514

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
               K G+  EA+ L + M+ +G  P+++TY  L++GLCK G +++A  L ++ +     
Sbjct: 515 DRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVT 574

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           P+HITY   +      G++ +   L + ML KG   T V+Y +LI      G++E A   
Sbjct: 575 PNHITYGCFLDHLTRGGNMEKAVQLHHAML-KGFLATTVSYNILIRGFCRLGKIEEATKL 633

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
              M    I P+ ITY+ +I   C+   + +A  L+  M ++G+ P+   Y+ L++  C 
Sbjct: 634 LHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCI 693

Query: 676 AGNWQEALRLYKEMLDREIEPDYCT 700
           AG  ++A  L  EM+ R +  ++ T
Sbjct: 694 AGELEKAFELRDEMIRRGMRSNHVT 718



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 147/496 (29%), Positives = 249/496 (50%), Gaps = 36/496 (7%)

Query: 170 CVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE 229
           C +     +L+  + ++  ++  +   +KM +  +   V   N +I      G +  A+ 
Sbjct: 224 CANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKY 283

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
            +  M + G+ P++VTY +++  +C EGE  +A ++  EM  +G SPN  T+  +I+G  
Sbjct: 284 YFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLC 343

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           R   + +A  L  +M +  +  S  +YN +I G+   G + EA +L +EMV +G  P   
Sbjct: 344 RANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTY 403

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA------- 402
           TY  LI GLC  GRVS+A+    ++ + +   + + Y+ L++GYC+ G   +A       
Sbjct: 404 TYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVM 463

Query: 403 ----------------------------FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
                                       F L  E+ +  L P  V Y  +ID   + G+L
Sbjct: 464 VERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNL 523

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A  L + M+++G LP+V+TYT ++NG CK G +  A     E L   + P+   Y   
Sbjct: 524 KEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCF 583

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           +    + G+  +A +L   ML KGF    ++YN+L+ G C+LG +EEA +LL  M  +  
Sbjct: 584 LDHLTRGGNMEKAVQLHHAML-KGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDI 642

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
           +PD+ITY++II+   +  +L+    L++ ML KGL P  + Y+ L+H     G LE AF 
Sbjct: 643 LPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFE 702

Query: 615 YFSEMQVKGIRPNVIT 630
              EM  +G+R N +T
Sbjct: 703 LRDEMIRRGMRSNHVT 718



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 142/500 (28%), Positives = 240/500 (48%), Gaps = 26/500 (5%)

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
           R+M +  + P + T + +L+   +     + L L  ++      P+   Y+ ++      
Sbjct: 85  RLMKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCEL 144

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLE--------------- 336
            +  +A+ +I  M     K+S   YN +I G  +   + EAL ++               
Sbjct: 145 KDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTY 204

Query: 337 -----------EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
                      +EM  +G+     TY+ILI   C+ G + +A     +M + ++   +  
Sbjct: 205 YGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYP 264

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           YN+L+ GYC+ GN   A   FDE+  + L PTVVTY +LI G C  G+   A ++   M 
Sbjct: 265 YNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMT 324

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
            +GI P+  T+T +++G C+   ++ A   F EM  + + P    Y   I G  + G+ S
Sbjct: 325 AKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNIS 384

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           EA+ L +EM+ KGF PD  TY  L+ GLC +G + EA E +  +  D    +++ Y++++
Sbjct: 385 EAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALV 444

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
           H   + G  +        M+ +G++  LV Y +LI   A        F    EM   G+R
Sbjct: 445 HGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLR 504

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           P+ + Y  +I+   +   + +A+GL+  M +EG LPN  TYT LIN  C AG   +A  L
Sbjct: 505 PDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELL 564

Query: 686 YKEMLDREIEPDYCTHSALL 705
            KE L  ++ P++ T+   L
Sbjct: 565 SKETLVSDVTPNHITYGCFL 584



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 121/479 (25%), Positives = 209/479 (43%), Gaps = 96/479 (20%)

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
           + +K L++ +LN    M    + P + T + L+ GL ++ R +D    F +++  NV PD
Sbjct: 71  HVDKVLMMLSLNDSRLMKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPD 130

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR------------ 430
           I  Y+ ++   C   +  +A  +   +       ++V YN LI GLC+            
Sbjct: 131 IYIYSAVVRSLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKN 190

Query: 431 --------------YGDLEVAQQLKENMINQGILPDVITYTIM----------------- 459
                         YG    A+ L + M  +G+  + ITY+I+                 
Sbjct: 191 CLMQKGLEANVVTYYGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFL 250

Query: 460 ------------------VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
                             +NG CK+GN S A+ +F+EM+ KGL P    YT+ I+G    
Sbjct: 251 DKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNE 310

Query: 502 GDTSEAYRLQEEMLAKGFPPDL-----------------------------------ITY 526
           G+  +A+++  EM AKG  P+                                    +TY
Sbjct: 311 GEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTY 370

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           NV++ G C+ G++ EA  LL +MVG GF+PD  TY  +I     +G +   ++  +++ +
Sbjct: 371 NVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHK 430

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
                  + Y+ L+H +   GR + A      M  +G+  +++ Y  LI+G  R      
Sbjct: 431 DHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRA 490

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            +GL  +M   G+ P+   YT +I+ +  AGN +EA  L+  M+D    P+  T++AL+
Sbjct: 491 LFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALI 549



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 87/182 (47%), Gaps = 15/182 (8%)

Query: 547 RKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD---LFNNMLRKGLSPTLVTYTVLIHAH 603
           R M     +P+  T +++++  L     RR  D   LF++++   + P +  Y+ ++ + 
Sbjct: 85  RLMKDCNLMPEVRTLSALLNGLLR---FRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSL 141

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
                   A      M+    + +++ YN LI+GLC+ RRI +A  +   + ++G+  N 
Sbjct: 142 CELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANV 201

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLES 723
            TY          G + EA  L+KEM ++ +  ++ T+S L+     +    +A+ +L+ 
Sbjct: 202 VTYY---------GKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDK 252

Query: 724 LT 725
           +T
Sbjct: 253 MT 254


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  282 bits (721), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 170/558 (30%), Positives = 270/558 (48%), Gaps = 39/558 (6%)

Query: 203 GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           G+  D    N ++ VL +         VY  MG  GIKP +VT+NT++ + C+  +++ A
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
           + +L EM  RG +P+  T+  L+ GF   G +E A  +   ML++G   +  + N +I G
Sbjct: 201 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 260

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
           Y + G + +AL   ++ +  G  P   TYN  + GLC+   V  A      M+++   PD
Sbjct: 261 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 320

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
           + +YN ++   C++G + EA  + +++  R  +P + T+NTLI  LC    LE A  L  
Sbjct: 321 VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLAR 380

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            +  +G+ PDV T+ I++N  CK+G+  +A   F EM   G  PD   Y T I     LG
Sbjct: 381 QVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLG 440

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE------------------ 544
              +A  L ++M + G P   ITYN ++ GLCK   +EEA E                  
Sbjct: 441 KLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFN 500

Query: 545 -----------------LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
                            L+ +M+ +G  P++ITY SI+    + GD+++  D+   M   
Sbjct: 501 TLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTAN 560

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
           G    +VTY  LI+     GR ++A      M++KG+RP    YN ++  L R   I  A
Sbjct: 561 GFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDA 620

Query: 648 YGLFIDMEEEGILPNKYTYTILINENCNAGN-WQEALRLYKEMLDREIEPDYCTHSAL-- 704
             LF +M E G  P+  TY I+    C  G   +EA     EM+D+   P++ +   L  
Sbjct: 621 LSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAE 680

Query: 705 -LLKQLDKDYKVHAVEYL 721
            LL     DY + A+E +
Sbjct: 681 GLLNLGMDDYFIRAIEII 698



 Score =  251 bits (642), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 144/469 (30%), Positives = 240/469 (51%)

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
           FGI+   V YN +L+   +  +M+    +  EM  RG  P+ VT+N L+    R  ++  
Sbjct: 140 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 199

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  ++ +M   G+     ++  ++ G+ E+G +  AL ++  M+  G + T  T N+LI 
Sbjct: 200 AVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 259

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           G CK GRV DA     + +     PD I+YNT + G C++ ++G A  + D +      P
Sbjct: 260 GYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 319

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
            V TYN +++ LC+ G LE A+ +   M+++G LPD+ T+  ++   C    L  A +  
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 379

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
            ++  KG+ PD + +   I    K+GD   A RL EEM   G  PD +TYN L+  LC L
Sbjct: 380 RQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSL 439

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G L +A +LL+ M   G     ITY +II    +   +    ++F+ M  +G+S   +T+
Sbjct: 440 GKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF 499

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
             LI       +++ AF   ++M  +G++PN ITYN+++   C+   I +A  +   M  
Sbjct: 500 NTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTA 559

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            G   +  TY  LIN  C AG  Q AL++ + M  + + P    ++ +L
Sbjct: 560 NGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVL 608



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 131/488 (26%), Positives = 231/488 (47%), Gaps = 37/488 (7%)

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
           +P    Y  +I      G L+  + L+ +M + G +V     +  +  Y  + L  +A++
Sbjct: 71  APGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVD 130

Query: 335 L--EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
           L   +     G+      YN L+  L +  ++      + EM  + + PD++++NTL+  
Sbjct: 131 LILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKA 190

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
            CR+  +  A L+ +E+ SR + P   T+ TL+ G    G +E A ++K  M+  G    
Sbjct: 191 LCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSAT 250

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
            +T  +++NG CK+G +  A  +  + +  G +PD+  Y T + G  +      A ++ +
Sbjct: 251 KVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMD 310

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
            M+ +G  PD+ TYN++V+ LCK G LEEA  +L +MV  G +PD  T+ ++I A     
Sbjct: 311 VMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGN 370

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN----- 627
            L    DL   +  KG+SP + T+ +LI+A    G   LA   F EM+  G  P+     
Sbjct: 371 RLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYN 430

Query: 628 ------------------------------VITYNALINGLCRLRRIDQAYGLFIDMEEE 657
                                          ITYN +I+GLC+  RI++A  +F  M+ +
Sbjct: 431 TLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQ 490

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHA 717
           GI  N  T+  LI+  C      +A  L  +M+   ++P+  T++++L     +     A
Sbjct: 491 GISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKA 550

Query: 718 VEYLESLT 725
            + LE++T
Sbjct: 551 ADILETMT 558



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 143/485 (29%), Positives = 223/485 (45%), Gaps = 21/485 (4%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVV---CVNMHGILDVLIGGGLSSCVSIKI 175
           GV  DE  F T+++  +E G + +A  V   ++   C      ++VLI G          
Sbjct: 211 GVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING---------- 260

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
                  Y K   VE  L    + + +G  PD    N  +  L  N     A +V  +M 
Sbjct: 261 -------YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMV 313

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
           + G  P + TYN +++  CK G+++EA  +L +M  RGC P+  T+N LI        LE
Sbjct: 314 QEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLE 373

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
           +A  L R +   G+    +++N +I    + G    AL L EEM   G  P   TYN LI
Sbjct: 374 EALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLI 433

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
             LC  G++  A     +M         I+YNT++ G C+   I EA  +FD++  + + 
Sbjct: 434 DNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGIS 493

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
              +T+NTLIDGLC+   ++ A  L   MI++G+ P+ ITY  ++   CK G++  A + 
Sbjct: 494 RNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADI 553

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
              M   G + D   Y T I G  K G T  A ++   M  KG  P    YN ++  L +
Sbjct: 554 LETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFR 613

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD-LRRGRDLFNNMLRKGLSPTLV 594
             ++ +A  L R+M   G  PD +TY  +       G  ++   D    M+ KG  P   
Sbjct: 614 RNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFS 673

Query: 595 TYTVL 599
           ++ +L
Sbjct: 674 SFRML 678



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 192/393 (48%), Gaps = 43/393 (10%)

Query: 151 VCVNMH-----GILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLL 205
           +C N H      ++DV++  G      +   ++++    K   +E+   + N+M+  G L
Sbjct: 296 LCQNDHVGHALKVMDVMVQEGHDP--DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL 353

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           PD+   N +I  L       +A ++ R +   G+ P + T+N ++++ CK G+   AL L
Sbjct: 354 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRL 413

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
             EM+  GC+P+ VTYN LI      G+L +A  L++DM   G   S  +YN II G  +
Sbjct: 414 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 473

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
           K  + EA  + ++M  +G++    T+N LI GLCK  ++ DA     +M+ + + P+ I+
Sbjct: 474 KMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNIT 533

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           YN++L  YC+ G+I +A  + + + +      VVTY TLI+GLC+ G  +VA ++   M 
Sbjct: 534 YNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMR 593

Query: 446 NQGILP-----------------------------------DVITYTIMVNGSCKMGN-L 469
            +G+ P                                   D +TY I+  G C+ G  +
Sbjct: 594 IKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPI 653

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
             A +F  EM+ KG  P+  ++     G L LG
Sbjct: 654 KEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLG 686


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  282 bits (721), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 159/489 (32%), Positives = 254/489 (51%), Gaps = 5/489 (1%)

Query: 205 LPDVKNC--NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           LPD   C  N ++K L   G   + ++  +   E    P +VTY TM+  +C  GE++ A
Sbjct: 250 LPDKNVCSHNILLKALLSAG---RLKDACQHFDEMSSPPDVVTYGTMVHGYCVRGELENA 306

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
           ++LL EM  +G   N   Y  +I      G++  A  ++ DM   G+ + A  +  +I G
Sbjct: 307 VKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISG 366

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
           +  KG L  A  L EEM  RG+A    T+  LI GLC+ G + +A     EM+ K +  D
Sbjct: 367 FCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVD 426

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
           +++Y  L+ GYC+ GN+ EAF + +E+  R + P VVTY  L DGLC+ GD+  A +L  
Sbjct: 427 VVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLH 486

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            M N+G+  +V TY  ++NG CK GNL  A     EM   G + D + YTT I    K G
Sbjct: 487 EMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSG 546

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
           +   A+ + +EML KG  P + TYNVL++G C  G +E   +LL  M+     P+ +TY 
Sbjct: 547 EFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYN 606

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
           S++       +++   +++  M  + ++P   TY +LI  H     ++ A  +  EM  K
Sbjct: 607 SLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEK 666

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
           G+R    +Y+ALI  L + ++  +A   F  M  EG+      Y+  ++ + N  N +  
Sbjct: 667 GLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLEST 726

Query: 683 LRLYKEMLD 691
           + L  E+++
Sbjct: 727 ITLCDELVE 735



 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 157/486 (32%), Positives = 261/486 (53%), Gaps = 12/486 (2%)

Query: 229 EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
           E+ R + ++G+ PS  + N +L        + EA+ L  E+  +    N  ++N+L+   
Sbjct: 214 ELLRRLRQYGLSPSPESCNAVLSRL----PLDEAIALFRELPDK----NVCSHNILLKAL 265

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
              G L+ A     +M      V+   Y  ++ GY  +G L  A+ L +EM  +G+    
Sbjct: 266 LSAGRLKDACQHFDEMSSPPDVVT---YGTMVHGYCVRGELENAVKLLDEMAAKGLESNA 322

Query: 349 ATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDE 408
             Y  +I  LC  G+VSDA     +M    V  D + + T++ G+C  G++  A  LF+E
Sbjct: 323 TVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEE 382

Query: 409 LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
           ++ R L    VT+  LI+GLCR G+L+ A ++ + M+++G+  DV+TYT++++G CK GN
Sbjct: 383 MQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGN 442

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
           +  A    NEM+ + + P+   YT    G  K GD   A  L  EM  KG   ++ TYN 
Sbjct: 443 MVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNS 502

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           L++GLCK G+LE+A  ++ +M   G   D  TYT++I    + G+  R  ++   ML KG
Sbjct: 503 LINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKG 562

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
           + P++ TY VL++     GR+E        M  K +RPNV+TYN+L+   C  + +    
Sbjct: 563 IKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTT 622

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQ 708
            ++  M  + + PN+ TY ILI  +C A N +EAL  ++EM+++ +     ++SA L++ 
Sbjct: 623 EIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSA-LIRL 681

Query: 709 LDKDYK 714
           L+K  K
Sbjct: 682 LNKKKK 687



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 126/418 (30%), Positives = 215/418 (51%), Gaps = 6/418 (1%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y  +  +E  + + ++M   GL  +      +I +L + G    A  V   M   G+   
Sbjct: 297 YCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALD 356

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            V + T++  FC +G++  A  L  EMQ RG + + VT+  LI G  R GEL++A  +++
Sbjct: 357 AVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQ 416

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M+  GL V   +Y  +I GY ++G +VEA  +  EMV R VAP + TY  L  GLCK G
Sbjct: 417 EMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQG 476

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            V  A     EM  K +  ++ +YN+L+ G C+ GN+ +A  +  E+ +      V TY 
Sbjct: 477 DVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYT 536

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           TLID LC+ G+ + A  + + M+++GI P + TY +++NG C  G +   ++    ML K
Sbjct: 537 TLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEK 596

Query: 483 GLQPDRFAYTT---QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
            ++P+   Y +   Q   +  +  T+E Y+    M ++   P+  TYN+L+ G CK  ++
Sbjct: 597 NVRPNVVTYNSLMKQYCIDKNMKSTTEIYK---GMHSQEVAPNENTYNILIKGHCKARNM 653

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
           +EA    ++M+  G      +Y+++I    +       R  F+ M  +GL+     Y+
Sbjct: 654 KEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYS 711



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/418 (23%), Positives = 188/418 (44%), Gaps = 25/418 (5%)

Query: 73  FCNNRWVSDHFQ--------AVVSDPELLVRVLNRIREKPRIAL--RFFRWVETQPGVKR 122
            CN   VSD  +         V  D  +   V++    K  +A   R F  ++ + G+  
Sbjct: 332 LCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKR-GLAA 390

Query: 123 DEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLI 182
           D      ++  L  +G L+ A  V++             ++  GL   V +    +L+  
Sbjct: 391 DRVTHTALINGLCRAGELKEADRVLQE------------MVDKGLD--VDVVTYTVLIDG 436

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K+  + +   V N+M+   + P+V     +   L   G    A E+   M   G++ +
Sbjct: 437 YCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELN 496

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           + TYN++++  CK G +++A+ ++ EM+  G   +  TY  LI    ++GE ++A  +++
Sbjct: 497 VYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQ 556

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +ML  G+K S  +YN ++ G+   G +     L E M+ + V P + TYN L+   C   
Sbjct: 557 EMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDK 616

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            +      +  M  + V P+  +YN L+ G+C++ N+ EA     E+  + L  T  +Y+
Sbjct: 617 NMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYS 676

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
            LI  L +      A+   + M N+G+  +   Y+  ++ S    NL       +E++
Sbjct: 677 ALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITLCDELV 734


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  281 bits (720), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 168/550 (30%), Positives = 276/550 (50%), Gaps = 39/550 (7%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           ++D LL +     +++  +    ++ +  + P+ + CN I+  L  N      R ++ ++
Sbjct: 136 VVDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFDLL 195

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
                 P++ T+N ++D  CKEGE+ EA  L   M+  GCSP+ VTYN LI G+ + G+L
Sbjct: 196 P----VPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDL 251

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           E+   L+ +M K G      +YN +I  +S+ G + +A +   EM  +GV   + T++  
Sbjct: 252 EEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTF 311

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           +   CK G V +A   F +M  + ++P+  +Y +L+ G C++G + +A +L DE+  + L
Sbjct: 312 VDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGL 371

Query: 415 VPTVVTYNTLIDGLCRYGDL-----------------------------------EVAQQ 439
           VP VVTY  ++DGLC+ G +                                   E A  
Sbjct: 372 VPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALD 431

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           L   M N+G+  DV  Y  ++ G CK   +  A+   ++M   GL+P+   YTT +    
Sbjct: 432 LLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALF 491

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           K G  SEA  L  ++L  GF P+++TY  L+ GLCK GS+ EA     KM   G  P+  
Sbjct: 492 KAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQ 551

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
            YT++I    ++G L +   L N M+ KG+S   V YT LI  +  +  L+ AF   ++M
Sbjct: 552 AYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKM 611

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
              G++ ++  Y   I+G C +  + +A G+  +M   GI P+K  Y  LI +    GN 
Sbjct: 612 IESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNM 671

Query: 680 QEALRLYKEM 689
           +EA  L  EM
Sbjct: 672 EEASSLQNEM 681



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 144/487 (29%), Positives = 241/487 (49%), Gaps = 35/487 (7%)

Query: 205 LPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALE 264
           +P+V   N +I  L   G  V+AR ++  M   G  P +VTYN+++D + K G+++E  +
Sbjct: 197 VPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQ 256

Query: 265 LLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYS 324
           L+ EM+  GC+ + VTYN LI  FS+ G +E+A     +M + G+  +  +++  +  + 
Sbjct: 257 LVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFC 316

Query: 325 EKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDII 384
           ++GL+ EA+ L  +M  RG+ P   TY  L+ G CK GR+ DA     EM+ + ++P+++
Sbjct: 317 KEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVV 376

Query: 385 SYNTLLYGYCRSGNIGEA--------------------------FL---------LFDEL 409
           +Y  ++ G C+ G + EA                          F+         L +++
Sbjct: 377 TYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQM 436

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
           +++ +   V  Y TLI GLC+   ++ A+ L   M   G+ P+ + YT +++   K G  
Sbjct: 437 KNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKE 496

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
           S A    +++L  G QP+   Y   I G  K G  SEA     +M   G  P++  Y  L
Sbjct: 497 SEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTAL 556

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           + G CK+GSL +A  L+ +M+  G   D + YTS+I   ++  +L+    L   M+  GL
Sbjct: 557 IDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGL 616

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
              L  YT  I        ++ A    SEM   GI P+   YN LI    +L  +++A  
Sbjct: 617 QLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASS 676

Query: 650 LFIDMEE 656
           L  +ME 
Sbjct: 677 LQNEMES 683



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 216/418 (51%), Gaps = 1/418 (0%)

Query: 168 SSCVS-IKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
           S C + +   + L+  ++K   +E+    F +M R G++ +V   +  +      G   +
Sbjct: 264 SGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQE 323

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A +++  M   G+ P+  TY +++D  CK G + +A+ LL EM  +G  PN VTY V++ 
Sbjct: 324 AMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVD 383

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G  + G++ +A  ++  M + G+K +   Y  +I G+        AL+L  +M  +G+  
Sbjct: 384 GLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMEL 443

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
            ++ Y  LI+GLCK  +V +A+    +M    + P+ + Y T++    ++G   EA  L 
Sbjct: 444 DVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALL 503

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
            ++      P VVTY  LIDGLC+ G +  A      M   G+ P+V  YT +++G CK+
Sbjct: 504 HKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKI 563

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G+L+ A    NEM+ KG+  D+  YT+ I G +K  +  +A+ L+ +M+  G   DL  Y
Sbjct: 564 GSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCY 623

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM 584
              + G C +  ++EA  +L +M+G G  PD   Y  +I    ++G++     L N M
Sbjct: 624 TCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEM 681



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 111/227 (48%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   V++   + +KM   GL P+      I+  L   G   +A  +   + + G +P++V
Sbjct: 457 KDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVV 516

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY  ++D  CK G + EA+    +M+  G  PN   Y  LI GF + G L +A  L+ +M
Sbjct: 517 TYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEM 576

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           +  G+ +    Y  +I GY ++  L +A  L+ +M+  G+   L  Y   I G C    +
Sbjct: 577 IDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMM 636

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
            +AR    EM+   + PD   YN L+  Y + GN+ EA  L +E+ S
Sbjct: 637 QEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEMES 683


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  281 bits (720), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 162/522 (31%), Positives = 281/522 (53%), Gaps = 3/522 (0%)

Query: 171 VSIKILDLLLLIYTKKSMVEQCL-LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE 229
           V+I I + LL  + +    ++ L ++ ++    G +PDV + + ++K L D G S +A +
Sbjct: 144 VNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADD 203

Query: 230 VYRMMGEFGI--KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITG 287
           + RMM E G    P++V YNT++D F KEG++ +A +L  EM  RG  P+ VTYN ++  
Sbjct: 204 LLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHA 263

Query: 288 FSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPT 347
             +   +++A   +R M+   +  +  +YN +I GYS  G   EA+ + +EM    + P 
Sbjct: 264 LCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 323

Query: 348 LATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFD 407
           + T ++L+  LCK+G++ +AR  F  M  K   PD+ SYN +L GY   G + +   LFD
Sbjct: 324 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 383

Query: 408 ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG 467
            +    + P   T+N LI      G L+ A  +   M + G+ PDV+TY  ++   C++G
Sbjct: 384 LMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 443

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
            +  A E FN+M+ +G+ PD++AY   I G    G   +A  L  E++  G   D++ ++
Sbjct: 444 KMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFS 503

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
            +++ LCKLG + +A  +    V  G  PD + Y+ ++     +G + +   +F+ M+  
Sbjct: 504 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 563

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
           G+ P +V Y  L++ +   GR++     F EM  +GI+P+ I Y+ +I+GL +  R   A
Sbjct: 564 GIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPA 623

Query: 648 YGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
              F +M E GI  +  TY I++        + EA+ L+KE+
Sbjct: 624 KVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKEL 665



 Score =  279 bits (713), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 162/506 (32%), Positives = 268/506 (52%), Gaps = 38/506 (7%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR-GCSPNGVTYNVLITGFSRNGELEQ 296
           G++ +I+  N +L+ FC+     EAL++L       GC P+  +Y++L+      G+  Q
Sbjct: 141 GLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQ 200

Query: 297 ARGLIRDMLKLGLKVSAH--SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           A  L+R M + G   S +  +YN +I G+ ++G + +A +L +EMV RG+ P L TYN +
Sbjct: 201 ADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSV 260

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           ++ LCK   +  A     +M+ K V+P+  +YN L+YGY  +G   EA  +F E+R  ++
Sbjct: 261 VHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI 320

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL----- 469
           +P VVT + L+  LC+YG ++ A+ + + M  +G  PDV +Y IM+NG    G L     
Sbjct: 321 LPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTD 380

Query: 470 --------SMAREF----------------------FNEMLRKGLQPDRFAYTTQIAGEL 499
                    +A +F                      FNEM   G++PD   Y T IA   
Sbjct: 381 LFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALC 440

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           ++G   +A     +M+ +G  PD   YN L+ G C  GSL +A EL+ +++ +G   D +
Sbjct: 441 RIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIV 500

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
            ++SII+   ++G +   +++F+  +  GL P  V Y++L+  +   G++E A   F  M
Sbjct: 501 FFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAM 560

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
              GI PNV+ Y  L+NG C++ RID+   LF +M + GI P+   Y+I+I+    AG  
Sbjct: 561 VSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRT 620

Query: 680 QEALRLYKEMLDREIEPDYCTHSALL 705
             A   + EM +  I  D CT++ +L
Sbjct: 621 VPAKVKFHEMTESGIAMDICTYNIVL 646



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 144/503 (28%), Positives = 252/503 (50%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y+     ++ + VF +M R+ +LPDV   + ++  L   G   +AR+V+  M   G  P 
Sbjct: 299 YSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPD 358

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           + +YN ML+ +  +G + +  +L   M G G +P+  T+NVLI  ++  G L++A  +  
Sbjct: 359 VFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFN 418

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M   G+K    +Y  +I      G + +A+    +M+ +GVAP    YN LI G C  G
Sbjct: 419 EMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHG 478

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            +  A+    E++   +  DI+ +++++   C+ G + +A  +FD   +  L P  V Y+
Sbjct: 479 SLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYS 538

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            L+DG C  G +E A ++ + M++ GI P+V+ Y  +VNG CK+G +      F EML++
Sbjct: 539 MLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQR 598

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G++P    Y+  I G  + G T  A     EM   G   D+ TYN+++ GL K    +EA
Sbjct: 599 GIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEA 658

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             L +++       + IT  ++I    +   +   +DLF ++ R  L P++VTY+++I  
Sbjct: 659 IFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITN 718

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
               G +E A   FS MQ  G  PN    N ++  L +   I +A      ++E      
Sbjct: 719 LIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLE 778

Query: 663 KYTYTILINENCNAGNWQEALRL 685
             T  +L++   + G  +E +R 
Sbjct: 779 HLTTMLLVDLFSSKGTCREHIRF 801



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/405 (31%), Positives = 198/405 (48%), Gaps = 44/405 (10%)

Query: 342 RGVAPTLATYNI-----------------------------------LIYGLCKWGRVSD 366
           R ++PT  TY I                                   L+ G C+  R  +
Sbjct: 105 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDE 164

Query: 367 A----RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV--PTVVT 420
           A     HR  E+     +PD+ SY+ LL   C  G  G+A  L   +     V  P VV 
Sbjct: 165 ALDILLHRTPEL---GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVA 221

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YNT+IDG  + GD+  A  L + M+ +GI PD++TY  +V+  CK   +  A  F  +M+
Sbjct: 222 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMV 281

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            K + P+ + Y   I G    G   EA R+ +EM      PD++T ++L+  LCK G ++
Sbjct: 282 NKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIK 341

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA ++   M   G  PD  +Y  +++     G L    DLF+ ML  G++P   T+ VLI
Sbjct: 342 EARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLI 401

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
            A+A  G L+ A + F+EM+  G++P+V+TY  +I  LCR+ ++D A   F  M ++G+ 
Sbjct: 402 KAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVA 461

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           P+KY Y  LI   C  G+  +A  L  E+++  +  D    S+++
Sbjct: 462 PDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSII 506



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 149/320 (46%), Gaps = 15/320 (4%)

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGL--------CRYGD-LEVAQQLKENMINQG--- 448
           EA  L DEL+ R         N  +  L        CR G  L VA   +     QG   
Sbjct: 47  EAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAASRAQGPRV 106

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
           + P   TY I+++   +     +A  FF ++LR GL+ +       + G  +   T EA 
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 166

Query: 509 R-LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI--PDHITYTSII 565
             L       G  PD+ +Y++L+  LC  G   +A++LLR M   G +  P+ + Y ++I
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 226

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
               + GD+ +  DLF  M+++G+ P LVTY  ++HA      ++ A  +  +M  K + 
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 286

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           PN  TYN LI G     +  +A  +F +M    ILP+  T ++L+   C  G  +EA  +
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 346

Query: 686 YKEMLDREIEPDYCTHSALL 705
           +  M  +   PD  +++ +L
Sbjct: 347 FDTMAMKGQNPDVFSYNIML 366


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  281 bits (720), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 179/627 (28%), Positives = 309/627 (49%), Gaps = 73/627 (11%)

Query: 171 VSIKILDLLLLIYTKKSMVEQCL-LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE 229
           V+I I + LL  + +    ++ L ++ ++    G +PDV + + ++K L D G S +A +
Sbjct: 147 VNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADD 206

Query: 230 VYRMMGEFGI--KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITG 287
           + RMM E G    P++V YNT++D F KEG++ +A +L  EM  RG  P+ VTYN ++  
Sbjct: 207 LLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHA 266

Query: 288 FSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPT 347
             +   +++A   +R M+   +  +  +YN +I GYS  G   EA+ + +EM    + P 
Sbjct: 267 LCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 326

Query: 348 LATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG---------- 397
           + T ++L+  LCK+G++ +AR  F  M  K   PD+ SYN +L GY   G          
Sbjct: 327 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 386

Query: 398 ----------------------NIG---EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
                                 N G   +A ++F+E+R   + P VVTY T+I  LCR G
Sbjct: 387 LMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 446

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
            ++ A +    MI+QG+ PD   Y  ++ G C  G+L  A+E  +E++  G+  D   ++
Sbjct: 447 KMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFS 506

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
           + I    KLG   +A  + +  +  G  PD + YN+L+ G C +G +E+A  +   MV  
Sbjct: 507 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSA 566

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
           G  P+ + Y ++++   ++G +  G  LF  ML++G+ P+ + Y+++I      GR   A
Sbjct: 567 GIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPA 626

Query: 613 FMYFSEMQVKGI-----------------------------------RPNVITYNALING 637
            M F EM   GI                                   + N+IT N +I+G
Sbjct: 627 KMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDG 686

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           + + RR+++A  LF  +    ++P+  TY+I+I      G  +EA  ++  M +   EP+
Sbjct: 687 MFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPN 746

Query: 698 YCTHSALLLKQLDKDYKVHAVEYLESL 724
               + ++ + L K+  V A  YL  +
Sbjct: 747 SRLLNHVVRELLKKNEIVRAGAYLSKI 773



 Score =  278 bits (712), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 162/506 (32%), Positives = 267/506 (52%), Gaps = 38/506 (7%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR-GCSPNGVTYNVLITGFSRNGELEQ 296
           G++ +I+  N +L+ FC+     EAL++L       GC P+  +Y++L+      G+  Q
Sbjct: 144 GLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQ 203

Query: 297 ARGLIRDMLKLGLKVSAH--SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           A  L+R M + G   S +  +YN +I G+ ++G + +A +L +EMV RG+ P L TYN +
Sbjct: 204 ADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSV 263

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           ++ LCK   +  A     +M+ K V+P+  +YN L+YGY  +G   EA  +F E+R  ++
Sbjct: 264 VHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI 323

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL----- 469
           +P VVT + L+  LC+YG ++ A+ + + M  +G  PDV +Y IM+NG    G L     
Sbjct: 324 LPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTD 383

Query: 470 --------SMAREF----------------------FNEMLRKGLQPDRFAYTTQIAGEL 499
                    +A +F                      FNEM   G++PD   Y T IA   
Sbjct: 384 LFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALC 443

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           ++G   +A     +M+ +G  PD   YN L+ G C  GSL +A EL+ +++ +G   D +
Sbjct: 444 RIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIV 503

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
            ++SII+   ++G +   +++F+  +  GL P  V Y +L+  +   G++E A   F  M
Sbjct: 504 FFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAM 563

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
              GI PNV+ Y  L+NG C++ RID+   LF +M + GI P+   Y+I+I+    AG  
Sbjct: 564 VSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRT 623

Query: 680 QEALRLYKEMLDREIEPDYCTHSALL 705
             A   + EM +  I  D CT++ +L
Sbjct: 624 VPAKMKFHEMTESGIAMDICTYNIVL 649



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 145/503 (28%), Positives = 252/503 (50%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y+     ++ + VF +M R+ +LPDV   + ++  L   G   +AR+V+  M   G  P 
Sbjct: 302 YSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPD 361

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           + +YN ML+ +  +G + +  +L   M G G +P+  T+NVLI  ++  G L++A  +  
Sbjct: 362 VFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFN 421

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M   G+K    +Y  +I      G + +A+    +M+ +GVAP    YN LI G C  G
Sbjct: 422 EMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHG 481

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            +  A+    E++   +  DI+ +++++   C+ G + +A  +FD   +  L P  V YN
Sbjct: 482 SLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYN 541

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            L+DG C  G +E A ++ + M++ GI P+V+ Y  +VNG CK+G +      F EML++
Sbjct: 542 MLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQR 601

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G++P    Y+  I G  + G T  A     EM   G   D+ TYN+++ GL K    +EA
Sbjct: 602 GIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEA 661

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             L +++       + IT  ++I    +   +   +DLF ++ R  L P++VTY+++I  
Sbjct: 662 IFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITN 721

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
               G +E A   FS MQ  G  PN    N ++  L +   I +A      ++E      
Sbjct: 722 LIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLE 781

Query: 663 KYTYTILINENCNAGNWQEALRL 685
             T  +L++   + G  +E +R 
Sbjct: 782 HLTAMLLVDLFSSKGTCREQIRF 804



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/475 (27%), Positives = 225/475 (47%), Gaps = 39/475 (8%)

Query: 270 QG-RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
           QG R  SP   TY +L+   +R    E A      +L+ GL+V+    N ++ G+ E   
Sbjct: 105 QGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKR 164

Query: 329 LVEALN-LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI--PDIIS 385
             EAL+ L       G  P + +Y+IL+  LC  G+   A      M     +  P++++
Sbjct: 165 TDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVA 224

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           YNT++ G+ + G++ +A  LF E+  R + P +VTYN+++  LC+   ++ A+     M+
Sbjct: 225 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMV 284

Query: 446 NQ-----------------------------------GILPDVITYTIMVNGSCKMGNLS 470
           N+                                    ILPDV+T ++++   CK G + 
Sbjct: 285 NKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIK 344

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            AR+ F+ M  KG  PD F+Y   + G    G   +   L + ML  G  PD  T+NVL+
Sbjct: 345 EARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLI 404

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
                 G L++A  +  +M   G  PD +TY ++I A   +G +    + FN M+ +G++
Sbjct: 405 KAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVA 464

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           P    Y  LI      G L  A    SE+   G+  +++ ++++IN LC+L R+  A  +
Sbjct: 465 PDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNI 524

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           F      G+ P+   Y +L++  C  G  ++ALR++  M+   IEP+   +  L+
Sbjct: 525 FDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLV 579



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 149/320 (46%), Gaps = 15/320 (4%)

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGL--------CRYGD-LEVAQQLKENMINQG--- 448
           EA  L DEL+ R         N  +  L        CR G  L VA   +     QG   
Sbjct: 50  EAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAASRAQGPRV 109

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
           + P   TY I+++   +     +A  FF ++LR GL+ +       + G  +   T EA 
Sbjct: 110 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 169

Query: 509 R-LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI--PDHITYTSII 565
             L       G  PD+ +Y++L+  LC  G   +A++LLR M   G +  P+ + Y ++I
Sbjct: 170 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 229

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
               + GD+ +  DLF  M+++G+ P LVTY  ++HA      ++ A  +  +M  K + 
Sbjct: 230 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 289

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           PN  TYN LI G     +  +A  +F +M    ILP+  T ++L+   C  G  +EA  +
Sbjct: 290 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 349

Query: 686 YKEMLDREIEPDYCTHSALL 705
           +  M  +   PD  +++ +L
Sbjct: 350 FDTMAMKGQNPDVFSYNIML 369



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/322 (24%), Positives = 140/322 (43%), Gaps = 29/322 (9%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G+  D   F +I+  L + G +  A  + +  V V +H                  + ++
Sbjct: 497 GMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHP--------------DAVVYNM 542

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKN----CNRIIKVLR-DNGFSVKAREVYRM 233
           L+  Y     +E+ L VF+ M+  G+ P+V       N   K+ R D G S+     +R 
Sbjct: 543 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSL-----FRE 597

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M + GIKPS + Y+ ++D   + G    A     EM   G + +  TYN+++ G  +N  
Sbjct: 598 MLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRC 657

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
            ++A  L +++  + +K++  + N +I G  +   + EA +L   +    + P++ TY+I
Sbjct: 658 FDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSI 717

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           +I  L K G V +A   F  M      P+    N ++    +   I  A     ++  RN
Sbjct: 718 MITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERN 777

Query: 414 LVPTVVTYNTLID-----GLCR 430
                +T   L+D     G CR
Sbjct: 778 FSLEHLTAMLLVDLFSSKGTCR 799


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  281 bits (720), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 159/517 (30%), Positives = 268/517 (51%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V+  L  F +M+R    P V    + +              +   M  F +  ++ + N 
Sbjct: 74  VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++  C+   +  ++ +L +M   G  P+ +T+N LI G    G++++A  L  +M+K G
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            + +  SY  +I G  + G    A+++ ++M   G  P + TY+ +I  LCK   V+DA 
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               EM+ + + P++ +YN++++G+C  G + EA  LF E+  R+++P  VT+  L+DGL
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGL 313

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G +  A+ + E M  +G+ PD+ TY  +++G C    ++ A++ F  M+RKG  P  
Sbjct: 314 CKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGA 373

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
            +Y   I G  K     EA  L  EM  K   PD +TY+ L+ GLC+LG  +EA  L ++
Sbjct: 374 HSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKE 433

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M   G  P+ +TY  ++    + G L     L  +M  K L P +V YT+LI      G+
Sbjct: 434 MCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGK 493

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           LE+A   FS++   G RP++ TY  +I GL +    D+AY LF  ME++G LPN  +Y +
Sbjct: 494 LEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNV 553

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +I       +   A+RL  EM+ +    +  T   LL
Sbjct: 554 MIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLL 590



 Score =  271 bits (694), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 143/438 (32%), Positives = 239/438 (54%)

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M + GI P  +T+N +++  C EG+++EA+EL  EM  RG  PN ++Y  +I G  + G 
Sbjct: 154 MFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGN 213

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
              A  + + M + G K +  +Y+ II    +  L+ +A+    EMV RG+ P + TYN 
Sbjct: 214 TSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNS 273

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           +++G C  G++++A   F EM+ ++V+P+ +++  L+ G C+ G + EA L+F+ +  + 
Sbjct: 274 IVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKG 333

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           + P + TYN L+DG C    +  A+++ E MI +G  P   +Y I++NG CK   +  A+
Sbjct: 334 VEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAK 393

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
               EM  K L PD   Y+T + G  +LG   EA  L +EM + G  P+L+TY +L+ G 
Sbjct: 394 SLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGF 453

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
           CK G L+EA +LL+ M      P+ + YT +I      G L   ++LF+ +   G  P +
Sbjct: 454 CKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDI 513

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
            TYTV+I      G  + A+  F +M+  G  PN  +YN +I G  + +    A  L  +
Sbjct: 514 RTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDE 573

Query: 654 MEEEGILPNKYTYTILIN 671
           M  +    N  T+ +L++
Sbjct: 574 MVGKRFSVNLSTFQMLLD 591



 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 148/494 (29%), Positives = 255/494 (51%), Gaps = 1/494 (0%)

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
           YRM+     +PS+V +   L SF K+ +    + L  +M     + N  + N+LI    R
Sbjct: 82  YRMV-RINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCR 140

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
              ++ +  ++  M KLG+   A ++N +I G   +G + EA+ L  EMV RG  P + +
Sbjct: 141 LNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVIS 200

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           Y  +I GLCK G  S A   F +M +    P++++Y+T++   C+   + +A     E+ 
Sbjct: 201 YTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMV 260

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
            R + P V TYN+++ G C  G L  A +L + M+ + ++P+ +T+TI+V+G CK G +S
Sbjct: 261 ERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVS 320

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            AR  F  M  KG++PD   Y   + G       +EA ++ E M+ KG  P   +YN+L+
Sbjct: 321 EARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILI 380

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
           +G CK   ++EA  LL +M      PD +TY++++    ++G  +   +LF  M   G  
Sbjct: 381 NGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPH 440

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           P LVTY +L+      G L+ A      M+ K + PN++ Y  LI G+    +++ A  L
Sbjct: 441 PNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKEL 500

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLD 710
           F  +  +G  P+  TYT++I      G   EA  L+++M D    P+ C+++ ++   L 
Sbjct: 501 FSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQ 560

Query: 711 KDYKVHAVEYLESL 724
                 A+  ++ +
Sbjct: 561 NQDSSTAIRLIDEM 574



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 149/461 (32%), Positives = 236/461 (51%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
           L++L+    + + V+  + V  KM + G+ PD    N +I  L + G   +A E++  M 
Sbjct: 131 LNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMV 190

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
           + G +P++++Y T+++  CK G    A+++  +M+  GC PN VTY+ +I    ++  + 
Sbjct: 191 KRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVN 250

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
            A   + +M++ G+  +  +YN I+ G+   G L EA  L +EMV R V P   T+ IL+
Sbjct: 251 DAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILV 310

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
            GLCK G VS+AR  F  M  K V PDI +YN L+ GYC    + EA  +F+ +  +   
Sbjct: 311 DGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCA 370

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P   +YN LI+G C+   ++ A+ L   M ++ + PD +TY+ ++ G C++G    A   
Sbjct: 371 PGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNL 430

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
           F EM   G  P+   Y   + G  K G   EA +L + M  K   P+++ Y +L+ G+  
Sbjct: 431 FKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFI 490

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
            G LE A EL  K+ GDG  PD  TYT +I   L+ G      DLF  M   G  P   +
Sbjct: 491 AGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCS 550

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
           Y V+I           A     EM  K    N+ T+  L++
Sbjct: 551 YNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLD 591



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 130/422 (30%), Positives = 227/422 (53%)

Query: 284 LITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG 343
            ++  S N  ++ A      M+++  + S   +   +  +++K      ++L  +M    
Sbjct: 64  FVSNNSNNVCVDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFR 123

Query: 344 VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF 403
           V   + + NILI  LC+   V  +     +M +  + PD I++N L+ G C  G I EA 
Sbjct: 124 VTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAV 183

Query: 404 LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
            LF+E+  R   P V++Y T+I+GLC+ G+  +A  + + M   G  P+V+TY+ +++  
Sbjct: 184 ELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSL 243

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
           CK   ++ A EF +EM+ +G+ P+ F Y + + G   LG  +EA RL +EM+ +   P+ 
Sbjct: 244 CKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNT 303

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
           +T+ +LV GLCK G + EA  +   M   G  PD  TY +++        +   + +F  
Sbjct: 304 VTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEI 363

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           M+RKG +P   +Y +LI+ +    R++ A    +EM  K + P+ +TY+ L+ GLC+L R
Sbjct: 364 MIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGR 423

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSA 703
             +A  LF +M   G  PN  TY IL++  C  G+  EAL+L K M ++++EP+   ++ 
Sbjct: 424 PKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTI 483

Query: 704 LL 705
           L+
Sbjct: 484 LI 485


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  281 bits (719), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 154/474 (32%), Positives = 254/474 (53%), Gaps = 2/474 (0%)

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M    I P IV+YNT+++  CKE  +++A++LL EM+G  C PN  TY +L+ G  + G 
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           +E+A  L+ +M + GL+V    Y+ +I G+  KG L     L +EM+ +G++P +  Y+ 
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           LI G CK G   +A      M  + + PD+ +Y  ++ G C+ G   +A  LFD +  + 
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
             P+ VTYN LI+GLC+ G +  A ++ E M+ +G   +V++Y  ++ G C  G L  A 
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240

Query: 474 EFFNEMLRKG--LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           + F+ +L  G  ++PD   + T I G  K G   +A  + + M+ +G   +L T ++L+ 
Sbjct: 241 KLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIG 300

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
              K G +++A EL +++   G +P   TY+ +I    +M  L   + LF+ M   GLSP
Sbjct: 301 EYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSP 360

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
           TL  Y  L+ +      LE A   F EM+     P+ I++N +I+G  +   I  A  L 
Sbjct: 361 TLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELL 420

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            DM++ G+ P+ YTY+  IN     G  +EA   +  M+   I PD   + +L+
Sbjct: 421 NDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLI 474



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 164/529 (31%), Positives = 267/529 (50%), Gaps = 2/529 (0%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           M R  +LPD+ + N II  L       KA ++   M     +P+  TY  ++D  CKEG 
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           ++EA+ LL EM+ +G   + V Y+ LI+GF   G L++ + L  +ML+ G+  +   Y+ 
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           +I G+ +KGL  EA  +   M  RG+ P + TY  +I GLCK GR   A   F  M  K 
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
             P  ++YN L+ G C+ G IG+AF +F+ +  +     VV+YNTLI GLC  G L+ A 
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240

Query: 439 QLKENMINQG--ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
           +L  +++  G  + PDVIT+  ++ G CK G L  A E ++ M+ +G   + F     I 
Sbjct: 241 KLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIG 300

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
             +K G   +A  L + +   G  P   TY+V++ G CK+  L  A  L  +M   G  P
Sbjct: 301 EYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSP 360

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
               Y +++ +  +   L + R LF  M      P  +++ ++I      G +  A    
Sbjct: 361 TLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELL 420

Query: 617 SEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNA 676
           ++MQ  G+ P+  TY++ IN L +L ++++A G F  M   GI P+ + Y  LI      
Sbjct: 421 NDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLN 480

Query: 677 GNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
              +E + L ++M D  +  D    +++L    +    +H +E L + +
Sbjct: 481 DEIEEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLHVMELLPNFS 529



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 136/457 (29%), Positives = 234/457 (51%), Gaps = 2/457 (0%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K+  VE+ + +  +M R GL  DV   + +I      G   + + ++  M E GI P++V
Sbjct: 57  KEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVV 116

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
            Y+ +++ FCK+G  +EA  +L  M  RG  P+  TY  +I G  ++G   +A  L   M
Sbjct: 117 VYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLM 176

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
            + G + S  +YN +I G  ++G + +A  + E M+ +G    + +YN LI GLC  G++
Sbjct: 177 TEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKL 236

Query: 365 SDARHRFFEMLRKN--VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            +A   F  +L     V PD+I++NT++ G C+ G + +A  ++D +  R     + T +
Sbjct: 237 DEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCH 296

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            LI    + G ++ A +L + +   G++P   TY++M++G CKM  L+ A+  F+ M   
Sbjct: 297 ILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKIS 356

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           GL P  F Y T +A   K     +A RL +EM      PD I++N+++ G  K G +  A
Sbjct: 357 GLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSA 416

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            ELL  M   G  PD  TY+S I+   ++G +   +  F++M+  G++P    Y  LI  
Sbjct: 417 KELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKG 476

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
                 +E       +M   G+  ++   N+++  LC
Sbjct: 477 FGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLC 513



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 122/249 (48%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K+  +++ + +++ M+  G   ++  C+ +I     +G   KA E+++ + + G+ PS  
Sbjct: 269 KEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSST 328

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY+ M+D FCK   +  A  L   M+  G SP    YN L+    +   LEQAR L ++M
Sbjct: 329 TYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEM 388

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
            +   +    S+N +I G  + G +  A  L  +M   G+ P   TY+  I  L K G++
Sbjct: 389 KESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQM 448

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            +A+  F  M+   + PD   Y++L+ G+  +  I E   L  ++    ++  +   N++
Sbjct: 449 EEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSI 508

Query: 425 IDGLCRYGD 433
           +  LC   +
Sbjct: 509 LTFLCNSAE 517



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 81/340 (23%), Positives = 158/340 (46%), Gaps = 15/340 (4%)

Query: 86  VVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYW 145
           VVS   L++ + N  +    + L F   +E    V+ D   F T+++ L + G L  A  
Sbjct: 220 VVSYNTLIMGLCNNGKLDEAMKL-FSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVE 278

Query: 146 VVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLL 205
           + +T++     G       G L +C       +L+  Y K  ++++ + ++ ++ + GL+
Sbjct: 279 IYDTMI---ERGSF-----GNLFTC------HILIGEYIKSGIIDKAMELWKRVHKLGLV 324

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P     + +I           A+ ++  M   G+ P++  YNT++ S CKE  +++A  L
Sbjct: 325 PSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRL 384

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
             EM+   C P+ +++N++I G  + G++  A+ L+ DM ++GL   A++Y+  I   S+
Sbjct: 385 FQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSK 444

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
            G + EA    + M+  G+ P    Y+ LI G      + +  +   +M    VI D+  
Sbjct: 445 LGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEI 504

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
            N++L   C S        L     S +   T ++ + L+
Sbjct: 505 TNSILTFLCNSAEHLHVMELLPNFSSESSGGTSISCDKLL 544


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  281 bits (719), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 206/715 (28%), Positives = 330/715 (46%), Gaps = 66/715 (9%)

Query: 52  PESESYYKELIISTV----EEKPW-AFCNNRWVSDHFQAVVSDPELLVRVLNRIREKPRI 106
           P +++  K  +I +V    E  PW +   NR           +PEL++ VL R+++    
Sbjct: 57  PSAKNENKRQVIDSVCQILETGPWGSSVENRLAELDLN---PNPELVIGVLRRLKDVNN- 112

Query: 107 ALRFFRWVETQPG--------------VKRDEFVFC------------------TILEIL 134
           A+ +FRW E                  + R     C                  T +EI+
Sbjct: 113 AVNYFRWAERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIV 172

Query: 135 ---IESGLLRSAYWVVETVVCVNMHGILDV---LIGGGLSS------------------C 170
              I+S  LR A+  ++T+  +           LIG   +S                   
Sbjct: 173 LSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYA 232

Query: 171 VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV 230
           V++ +   L+ ++ ++  V+  L + ++M  N L PDV   N  I      G    A + 
Sbjct: 233 VNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKF 292

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
           +  M   G+    VTY +M+   CK   + EA+EL   M      P    YN +I G+  
Sbjct: 293 FHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGM 352

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
            G+ E A  L+    + G   S  SYN I+     KG + EAL   EEM  +   P L+T
Sbjct: 353 AGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEM-KKDAIPNLST 411

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           YNI+I  LCK G++  A      M    + P++I+ N ++   C++  + +A  +F+ L 
Sbjct: 412 YNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLD 471

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
            +   P  VTY +LI+GL R+G ++ A +L E M++   +P+ + YT ++    K G   
Sbjct: 472 HKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKE 531

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
              + +NEMLR G  PD     T +    K G+  +   L +E+   GF PD  +Y +L+
Sbjct: 532 DGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILI 591

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
           HGL K G   EA EL   M   G + D   Y ++I    + G + +   L   M  KG  
Sbjct: 592 HGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHE 651

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           PT+VTY  +I   A   RL+ A+M F E + KGI  NV+ Y++LI+G  ++ RID+AY +
Sbjct: 652 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLI 711

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             ++ ++G+ PN YT+  L++    A    EAL  ++ M D +  P+Y T+S L+
Sbjct: 712 MEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILI 766



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 250/512 (48%), Gaps = 1/512 (0%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           + +++ Y      E    +  +  R G +P V + N I+  L   G   +A + +  M +
Sbjct: 344 NTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKK 403

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
             I P++ TYN M+D  CK G+++ AL +   M+  G  PN +T N+++    +   L+ 
Sbjct: 404 DAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDD 462

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  +   +     +  A +Y  +I G    G + EA  L E+M+     P    Y  LI 
Sbjct: 463 ACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIR 522

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
              K GR  D    + EMLR    PD++  NT +    ++G I +   LF E+++   +P
Sbjct: 523 NFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIP 582

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
              +Y  LI GL + G    A +L   M  QG + D   Y  +++G CK G ++ A +  
Sbjct: 583 DARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLL 642

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
            EM  KG +P    Y + I G  K+    EAY L EE  +KG   +++ Y+ L+ G  K+
Sbjct: 643 EEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKV 702

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G ++EA  ++ +++  G  P+  T+  ++ A ++  ++      F +M     +P  +TY
Sbjct: 703 GRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITY 762

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
           ++LIH      +   AF+++ EMQ +G +PNV TY  +I+GL +   I +A  LF   +E
Sbjct: 763 SILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKE 822

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKE 688
           +G + +   Y  +I    NA    +A RL++E
Sbjct: 823 KGGVADSAIYNAIIEGLSNANRASDAYRLFEE 854



 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 161/592 (27%), Positives = 278/592 (46%), Gaps = 27/592 (4%)

Query: 103 KPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVE------TVVCVNMH 156
           K  +A +FF  ++   G+  D+  + +++ +L ++  L  A  + E       V C   +
Sbjct: 285 KVDMAWKFFHEMKAN-GLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAY 343

Query: 157 GILDVLIGGGLSS----------------CV-SIKILDLLLLIYTKKSMVEQCLLVFNKM 199
             +  ++G G++                 C+ S+   + +L    +K  V++ L  F +M
Sbjct: 344 NTM--IMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEM 401

Query: 200 LRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEM 259
            ++ + P++   N +I +L   G    A  V   M + G+ P+++T N M+D  CK   +
Sbjct: 402 KKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRL 460

Query: 260 QEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI 319
            +A  +   +  + C P+ VTY  LI G  R+G +++A  L   ML      +A  Y  +
Sbjct: 461 DDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSL 520

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           I  + + G   +   +  EM+  G +P L   N  +  + K G +   R  F E+     
Sbjct: 521 IRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGF 580

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
           IPD  SY  L++G  ++G   EA+ LF  ++ +  V     YNT+IDG C+ G +  A Q
Sbjct: 581 IPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQ 640

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           L E M  +G  P V+TY  +++G  K+  L  A   F E   KG++ +   Y++ I G  
Sbjct: 641 LLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFG 700

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           K+G   EAY + EE++ KG  P++ T+N L+  L K   + EA    + M      P++I
Sbjct: 701 KVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYI 760

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
           TY+ +IH   ++    +    +  M ++G  P + TYT +I   A  G +  A   F + 
Sbjct: 761 TYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKF 820

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
           + KG   +   YNA+I GL    R   AY LF +   +G      T  +L++
Sbjct: 821 KEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLD 872


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  281 bits (719), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 187/629 (29%), Positives = 305/629 (48%), Gaps = 18/629 (2%)

Query: 90  PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVET 149
           P  +V +L+       + LRFF WV      K D   F ++L  L+   L   A  V   
Sbjct: 78  PHHVVNLLDTHNNTESV-LRFFHWVSRTHFFKHDMSCFVSMLNRLVRDRLFVPADNVRIL 136

Query: 150 VV--CVN---MHGILDVL--IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRN 202
           ++  C N   +  ++ VL  I        ++     LL+   K  M      V+ +ML +
Sbjct: 137 MIKSCRNEGEVKRVIQVLSEINTTYDFGYTLYSFSTLLIQLGKFDMDGLGRDVYIEMLNS 196

Query: 203 GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE---FGIKPSIVTYNTMLDSFCKEGEM 259
           G+ P++   N +IK+L + G   K +E   +MG    +G  P   TY +++   CK G +
Sbjct: 197 GIRPNLFTFNAMIKILCNKG---KVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNL 253

Query: 260 QEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI 319
             A E+   M   GC PN VTY+ LI G    G LE+A  ++ +M+  G++ + H+Y   
Sbjct: 254 DLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIP 313

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           I    + G   EA+ L  +M  RG  P + TY  LI GL + G+   A   + +ML   +
Sbjct: 314 IVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGL 373

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
           +P  ++Y+ L+      G    A  +F+ + S + +P   TYN +I G C  G ++ A  
Sbjct: 374 VPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATA 433

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           + + M+  G  P+VITY I+++   K G ++ A      M   GL+ D + Y   I+G  
Sbjct: 434 IFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFS 493

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           + G    A+ L  EM+  G  P+++TYN +++G   +  +++A  L  KMV  G +P   
Sbjct: 494 RGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSG 553

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
           TY  +I    +   +    +    M+++GL P ++TYT  I      GR  LAF  F EM
Sbjct: 554 TYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEM 613

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
           + +   PN+ TY++LI+GLC+  + + A  L     ++G  PN  TYT L+   C  G  
Sbjct: 614 KKRDYFPNLCTYSSLIDGLCQEGQAEDAERLL----DDGCEPNVDTYTTLVRGLCGKGRC 669

Query: 680 QEALRLYKEMLDREIEPDYCTHSALLLKQ 708
            EA +L + M  + ++P    + ALL+ Q
Sbjct: 670 YEADQLVESMKKKGLQPSEEIYRALLVGQ 698



 Score =  271 bits (694), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 162/498 (32%), Positives = 259/498 (52%), Gaps = 4/498 (0%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
            R+VY  M   GI+P++ T+N M+   C +G++QEA  ++  +   G  P+  TY  LI 
Sbjct: 186 GRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLII 245

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G  +NG L+ A  +   M+K G   ++ +Y+ +I G   +G L EA+++ EEM+ +G+ P
Sbjct: 246 GHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEP 305

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
           T+  Y I I  LC  GR  +A     +M ++   P++ +Y  L+ G  R G    A  ++
Sbjct: 306 TVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVY 365

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
            ++ +  LVPT VTY+ LI+ L   G  E A  + E M++   LP+  TY +++ G C +
Sbjct: 366 HKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSI 425

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G +  A   F++ML+ G  P+   Y   I    K G  + A RL E M   G   D  TY
Sbjct: 426 GYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTY 485

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
             L+ G  + G LE A  L  +MV  G  P+ +TY +II+  L +  +     LF  M+ 
Sbjct: 486 ANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVE 545

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
            G  P+  TY ++I   +   R+  A  +  +M  +G+ PNVITY + I+GLC+  R   
Sbjct: 546 SGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSL 605

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
           A+ +F +M++    PN  TY+ LI+  C  G  ++A RL    LD   EP+  T++ L+ 
Sbjct: 606 AFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERL----LDDGCEPNVDTYTTLVR 661

Query: 707 KQLDKDYKVHAVEYLESL 724
               K     A + +ES+
Sbjct: 662 GLCGKGRCYEADQLVESM 679



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 172/608 (28%), Positives = 287/608 (47%), Gaps = 21/608 (3%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G++ + F F  +++IL   G ++ A  ++  +                  +C        
Sbjct: 197 GIRPNLFTFNAMIKILCNKGKVQEAELIMGHIF--------------HYGACPDTFTYTS 242

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L++ + K   ++    +F++M+++G  P+    + +I  L   G   +A ++   M + G
Sbjct: 243 LIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKG 302

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           I+P++  Y   + S C  G   EA++LL +M+ RGC PN  TY  LI+G SR+G+ E A 
Sbjct: 303 IEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAI 362

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
           G+   ML  GL  +A +Y+ +I     +G    AL + E M++    P   TYN++I G 
Sbjct: 363 GVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGF 422

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C  G +  A   F +ML+    P++I+YN +++ Y + G +  A  L + ++   L    
Sbjct: 423 CSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDT 482

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
            TY  LI G  R G LE A  L   M+  GI P+V+TY  ++NG   +  +  A   F +
Sbjct: 483 WTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWK 542

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M+  G  P    Y   I+G  K    SEA     +M+ +G  P++ITY   + GLCK G 
Sbjct: 543 MVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGR 602

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
              A ++  +M    + P+  TY+S+I    + G       L ++    G  P + TYT 
Sbjct: 603 TSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD----GCEPNVDTYTT 658

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           L+     +GR   A      M+ KG++P+   Y AL+ G C+   ++ A  +F  M   G
Sbjct: 659 LVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTG 718

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL---LLKQLDKDYKV 715
             P    Y  LI   C A   Q+A  +++ ML +    D    + L   LLK+ + D  +
Sbjct: 719 FQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSL 778

Query: 716 HAVEYLES 723
             +  +ES
Sbjct: 779 ELLHVMES 786



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 134/418 (32%), Positives = 224/418 (53%), Gaps = 4/418 (0%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           E  L +F  ML +  LP+ +  N IIK     G+  KA  ++  M + G  P+++TYN +
Sbjct: 394 ETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNII 453

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           +  + K+G M  A+ LL  M+G G   +  TY  LI+GFSR G+LE A  L  +M++ G+
Sbjct: 454 IHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGI 513

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
             +  +YN II GY     + +AL L  +MV  G  P+  TYN++I G  K  R+S+A +
Sbjct: 514 SPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAEN 573

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
              +M+++ ++P++I+Y + + G C++G    AF +F E++ R+  P + TY++LIDGLC
Sbjct: 574 FCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLC 633

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
           + G  E A++L    ++ G  P+V TYT +V G C  G    A +    M +KGLQP   
Sbjct: 634 QEGQAEDAERL----LDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEE 689

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
            Y   + G+ K  +   A ++ + M+  GF P L  Y  L+  LCK    ++A  + + M
Sbjct: 690 IYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTM 749

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
           +   +  D + +T ++   L+ G+     +L + M  +  +    T  +L    +A G
Sbjct: 750 LKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCTLNFQTRVMLARELSALG 807



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 116/443 (26%), Positives = 201/443 (45%), Gaps = 19/443 (4%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           AL  F W+ +   +   E  +  I++     G ++ A              I D ++  G
Sbjct: 396 ALTIFEWMLSHDSLPNTE-TYNVIIKGFCSIGYIQKAT------------AIFDQMLKAG 442

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
            S   ++   ++++ IY K+  +   + +   M  NGL  D      +I      G    
Sbjct: 443 PSP--NVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEH 500

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A  ++  M E GI P++VTYN +++ +    ++ +AL L W+M   G  P+  TYN++I+
Sbjct: 501 AFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMIS 560

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           GFS+   + +A      M+K GL  +  +Y   I G  + G    A  +  EM  R   P
Sbjct: 561 GFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFP 620

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
            L TY+ LI GLC+ G+  DA      +L     P++ +Y TL+ G C  G   EA  L 
Sbjct: 621 NLCTYSSLIDGLCQEGQAEDAE----RLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLV 676

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
           + ++ + L P+   Y  L+ G C+  ++E A ++ ++M+  G  P +  Y  ++   CK 
Sbjct: 677 ESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKA 736

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
                A+  F  ML+K    D   +T  + G LK G+T  +  L   M ++    +  T 
Sbjct: 737 NFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCTLNFQTR 796

Query: 527 NVLVHGLCKLGSLEEANELLRKM 549
            +L   L  LG   E  ++ +++
Sbjct: 797 VMLARELSALGCSIEIPQISKQL 819



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 153/306 (50%)

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
           T+ +++TL+  L ++    + + +   M+N GI P++ T+  M+   C  G +  A    
Sbjct: 166 TLYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIM 225

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
             +   G  PD F YT+ I G  K G+   A+ + + M+  G  P+ +TY+ L++GLC  
Sbjct: 226 GHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSE 285

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G LEEA ++L +M+  G  P    YT  I +  + G       L   M ++G  P + TY
Sbjct: 286 GRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTY 345

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
           T LI   +  G+ E+A   + +M   G+ P  +TY+ALIN L    R + A  +F  M  
Sbjct: 346 TALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLS 405

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVH 716
              LPN  TY ++I   C+ G  Q+A  ++ +ML     P+  T++ ++     + Y  +
Sbjct: 406 HDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNN 465

Query: 717 AVEYLE 722
           A+  LE
Sbjct: 466 AMRLLE 471


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  281 bits (719), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 206/715 (28%), Positives = 330/715 (46%), Gaps = 66/715 (9%)

Query: 52  PESESYYKELIISTV----EEKPW-AFCNNRWVSDHFQAVVSDPELLVRVLNRIREKPRI 106
           P +++  K  +I +V    E  PW +   NR           +PEL++ VL R+++    
Sbjct: 57  PSAKNENKRQVIDSVCQILETGPWGSSVENRLAELDLN---PNPELVIGVLRRLKDVNN- 112

Query: 107 ALRFFRWVETQPG--------------VKRDEFVFC------------------TILEIL 134
           A+ +FRW E                  + R     C                  T +EI+
Sbjct: 113 AVNYFRWAERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIV 172

Query: 135 ---IESGLLRSAYWVVETVVCVNMHGILDV---LIGGGLSS------------------C 170
              I+S  LR A+  ++T+  +           LIG   +S                   
Sbjct: 173 LSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYA 232

Query: 171 VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV 230
           V++ +   L+ ++ ++  V+  L + ++M  N L PDV   N  I      G    A + 
Sbjct: 233 VNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKX 292

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
           +  M   G+    VTY +M+   CK   + EA+EL   M      P    YN +I G+  
Sbjct: 293 FHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGM 352

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
            G+ E A  L+    + G   S  SYN I+     KG + EAL   EEM  +   P L+T
Sbjct: 353 AGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEM-KKDAIPNLST 411

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           YNI+I  LCK G++  A      M    + P++I+ N ++   C++  + +A  +F+ L 
Sbjct: 412 YNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLD 471

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
            +   P  VTY +LI+GL R+G ++ A +L E M++   +P+ + YT ++    K G   
Sbjct: 472 HKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKE 531

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
              + +NEMLR G  PD     T +    K G+  +   L +E+   GF PD  +Y +L+
Sbjct: 532 DGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILI 591

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
           HGL K G   EA EL   M   G + D   Y ++I    + G + +   L   M  KG  
Sbjct: 592 HGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHE 651

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           PT+VTY  +I   A   RL+ A+M F E + KGI  NV+ Y++LI+G  ++ RID+AY +
Sbjct: 652 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLI 711

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             ++ ++G+ PN YT+  L++    A    EAL  ++ M D +  P+Y T+S L+
Sbjct: 712 MEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILI 766



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 250/512 (48%), Gaps = 1/512 (0%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           + +++ Y      E    +  +  R G +P V + N I+  L   G   +A + +  M +
Sbjct: 344 NTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKK 403

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
             I P++ TYN M+D  CK G+++ AL +   M+  G  PN +T N+++    +   L+ 
Sbjct: 404 DAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDD 462

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  +   +     +  A +Y  +I G    G + EA  L E+M+     P    Y  LI 
Sbjct: 463 ACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIR 522

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
              K GR  D    + EMLR    PD++  NT +    ++G I +   LF E+++   +P
Sbjct: 523 NFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIP 582

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
              +Y  LI GL + G    A +L   M  QG + D   Y  +++G CK G ++ A +  
Sbjct: 583 DARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLL 642

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
            EM  KG +P    Y + I G  K+    EAY L EE  +KG   +++ Y+ L+ G  K+
Sbjct: 643 EEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKV 702

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G ++EA  ++ +++  G  P+  T+  ++ A ++  ++      F +M     +P  +TY
Sbjct: 703 GRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITY 762

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
           ++LIH      +   AF+++ EMQ +G +PNV TY  +I+GL +   I +A  LF   +E
Sbjct: 763 SILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKE 822

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKE 688
           +G + +   Y  +I    NA    +A RL++E
Sbjct: 823 KGGVADSAIYNAIIEGLSNANRASDAYRLFEE 854



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 146/500 (29%), Positives = 242/500 (48%), Gaps = 1/500 (0%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           S+   + +L    +K  V++ L  F +M ++ + P++   N +I +L   G    A  V 
Sbjct: 374 SVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVR 432

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M + G+ P+++T N M+D  CK   + +A  +   +  + C P+ VTY  LI G  R+
Sbjct: 433 DAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRH 492

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G +++A  L   ML      +A  Y  +I  + + G   +   +  EM+  G +P L   
Sbjct: 493 GRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLL 552

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           N  +  + K G +   R  F E+     IPD  SY  L++G  ++G   EA+ LF  ++ 
Sbjct: 553 NTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKE 612

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           +  V     YNT+IDG C+ G +  A QL E M  +G  P V+TY  +++G  K+  L  
Sbjct: 613 QGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDE 672

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A   F E   KG++ +   Y++ I G  K+G   EAY + EE++ KG  P++ T+N L+ 
Sbjct: 673 AYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLD 732

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
            L K   + EA    + M      P++ITY+ +IH   ++    +    +  M ++G  P
Sbjct: 733 ALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKP 792

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
            + TYT +I   A  G +  A   F + + KG   +   YNA+I GL    R   AY LF
Sbjct: 793 NVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLF 852

Query: 652 IDMEEEGILPNKYTYTILIN 671
            +   +G      T  +L++
Sbjct: 853 EEARLKGCSIYTKTCVVLLD 872



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 115/272 (42%), Gaps = 35/272 (12%)

Query: 117 QPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKIL 176
           + G   D   + T+++   +SG +  AY ++E +     H    V  G  +     I  L
Sbjct: 612 EQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMK-TKGHEPTVVTYGSVIDGLAKIDRL 670

Query: 177 D---------------LLLLIYT-------KKSMVEQCLLVFNKMLRNGLLPDVKNCNRI 214
           D               L ++IY+       K   +++  L+  ++++ GL P+V   N +
Sbjct: 671 DEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCL 730

Query: 215 IKVLRDNGFSVKAREV------YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWE 268
           +  L      VKA E+      ++ M +    P+ +TY+ ++   CK  +  +A     E
Sbjct: 731 LDAL------VKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQE 784

Query: 269 MQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
           MQ +G  PN  TY  +I+G ++ G + +A  L     + G    +  YN II G S    
Sbjct: 785 MQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANR 844

Query: 329 LVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
             +A  L EE   +G +    T  +L+  L K
Sbjct: 845 ASDAYRLFEEARLKGCSIYTKTCVVLLDSLHK 876


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  281 bits (719), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 155/530 (29%), Positives = 276/530 (52%), Gaps = 8/530 (1%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE----FGIKPSIVTYNTMLDSFC 254
           M+++  LP +   N+++  +      +K  ++   +GE     GI  ++ TYN +++ FC
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIA----KMKKFDLVISLGEKMQRLGISHNLYTYNILINCFC 56

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           +  ++  AL LL +M   G  P+ VT + L+ G+     +  A  L+  M+++G +    
Sbjct: 57  RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 116

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           ++  +I G        EA+ L + MV RG  P L TY +++ GLCK G +  A +   +M
Sbjct: 117 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 176

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
               +  D++ +NT++   C+  ++ +A  LF E+ ++ + P VVTY++LI  LC YG  
Sbjct: 177 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 236

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
             A QL  +MI + I P+++T+  +++   K G    A +  ++M+++ + PD F Y + 
Sbjct: 237 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSL 296

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I G        +A ++ E M++K   PDL TYN L+ G CK   +E+  EL R+M   G 
Sbjct: 297 INGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGL 356

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
           + D +TYT++I      GD    + +F  M+  G+ P ++TY++L+      G+LE A  
Sbjct: 357 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 416

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F  MQ   I+ ++  Y  +I G+C+  ++D  + LF  +  +G+ PN  TY  +I+  C
Sbjct: 417 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 476

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           +    QEA  L K+M +    PD  T++ L+   L    K  + E +  +
Sbjct: 477 SKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 145/438 (33%), Positives = 237/438 (54%), Gaps = 10/438 (2%)

Query: 180 LLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGI 239
           L ++ K S   + + + ++M++ G  P++     ++  L   G    A  +   M    I
Sbjct: 125 LFLHNKAS---EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 181

Query: 240 KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
           +  +V +NT++DS CK   + +AL L  EM+ +G  PN VTY+ LI+     G    A  
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
           L+ DM++  +  +  ++N +I  + ++G  VEA  L ++M+ R + P + TYN LI G C
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 301

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
              R+  A+  F  M+ K+  PD+ +YNTL+ G+C+S  + +   LF E+  R LV   V
Sbjct: 302 MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 361

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
           TY TLI GL   GD + AQ++ + M++ G+ PD++TY+I+++G C  G L  A E F+ M
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
            +  ++ D + YTT I G  K G   + + L   +  KG  P+++TYN ++ GLC    L
Sbjct: 422 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 481

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR---KGLSPTLVTY 596
           +EA  LL+KM  DG +PD  TY ++I A L  GD     +L   M      G + T+   
Sbjct: 482 QEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 541

Query: 597 TVLIHAHAARGRLELAFM 614
             ++H     GRL+ +F+
Sbjct: 542 ANMLH----DGRLDKSFL 555


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  281 bits (719), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 161/499 (32%), Positives = 268/499 (53%), Gaps = 3/499 (0%)

Query: 194 LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG--IKPSIVTYNTMLD 251
           ++ ++M   G +P+V + + I+K L DN  S +A ++++MM + G    P++V YNT++ 
Sbjct: 214 VLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIH 273

Query: 252 SFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKV 311
            F KEGE  +A  L  EM  +G  P+ VTYN++I    +   +++A  ++R M   G + 
Sbjct: 274 GFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQP 333

Query: 312 SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRF 371
              +YN +I GY+  G L EA  +  +M +RG+ P +   N  +  LCK GR  +A   F
Sbjct: 334 DTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIF 393

Query: 372 FEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY 431
             M  K   PDI+SY TLL+GY   G   +   LF+ ++S  +      +N LI    + 
Sbjct: 394 DSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKR 453

Query: 432 GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAY 491
           G ++ A  +   M  QG+ PDV+TY+ +++   +MG L+ A E FN+M+ +G+QP+   Y
Sbjct: 454 GMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVY 513

Query: 492 TTQIAGELKLGDTSEAYRLQEEMLAKGFP-PDLITYNVLVHGLCKLGSLEEANELLRKMV 550
            + I G    G   +A  L  EM+ KG P PD++ +N +++ LCK G + +A+++   + 
Sbjct: 514 HSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVT 573

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
             G  PD IT+TS+I     +G + +   + + M   G+   +VTY+ L+  +   GR+ 
Sbjct: 574 DIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRIN 633

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
                F EMQ KG++PN +TY  ++ GL R  R   A   F +M E G       Y I++
Sbjct: 634 DGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIIL 693

Query: 671 NENCNAGNWQEALRLYKEM 689
              C      EA+ L++++
Sbjct: 694 GGLCRNNCADEAIILFQKL 712



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 148/531 (27%), Positives = 265/531 (49%), Gaps = 1/531 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F++M R G+ PDV   N II  L       KA  V R M   G +P  VTYN M+  + 
Sbjct: 287 LFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYA 346

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
             G ++EA ++  +M+ RG  PN V  N  +    ++G  ++A  +   M   G K    
Sbjct: 347 TLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIV 406

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           SY  ++ GY+ +G   + + L   M + G+A     +NILI+   K G V DA   F EM
Sbjct: 407 SYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEM 466

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
            ++ V PD+++Y+T++  + R G + +A   F+++ +R + P    Y+++I G C +G L
Sbjct: 467 QQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGL 526

Query: 435 EVAQQLKENMINQGI-LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
             A++L   MIN+GI  PD++ +  ++N  CK G +  A + F+ +   G +PD   +T+
Sbjct: 527 VKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTS 586

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            I G   +G   +A+++ + M   G   D++TY+ L+ G  K G + +   L R+M   G
Sbjct: 587 LIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKG 646

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
             P+ +TY  ++      G     R  F+ M+  G + T+  Y +++         + A 
Sbjct: 647 VKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAI 706

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
           + F ++    ++ ++   N +IN + +++R ++A  LF  +   G+LPN+ TY ++I   
Sbjct: 707 ILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINL 766

Query: 674 CNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
              G  ++A  ++  M    I P     + ++   L+K     A  YL  +
Sbjct: 767 LKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKV 817



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 139/472 (29%), Positives = 248/472 (52%), Gaps = 4/472 (0%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALE-LLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
           G+K   +T +T+L   C     +EA+  LL  M   GC PN  +Y++++ G   N   ++
Sbjct: 187 GLKIHQITASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQR 246

Query: 297 ARGLIRDMLKLGLKVSAH--SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           A  L + M K G   S +  +YN +I G+ ++G   +A +L  EM  +GV P + TYN++
Sbjct: 247 ALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLI 306

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           I  LCK   +  A     +M      PD ++YN +++GY   G + EA  +F +++SR L
Sbjct: 307 IDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGL 366

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
           +P +V  N+ +  LC++G  + A ++ ++M  +G  PD+++Y  +++G    G  +    
Sbjct: 367 IPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIG 426

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
            FN M   G+  D   +   I    K G   +A  +  EM  +G  PD++TY+ ++    
Sbjct: 427 LFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFS 486

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS-PTL 593
           ++G L +A E   +MV  G  P+   Y SII      G L + ++L + M+ KG+  P +
Sbjct: 487 RMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDI 546

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
           V +  +I++    GR+  A   F  +   G RP+VIT+ +LI+G C + ++D+A+ +   
Sbjct: 547 VFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDA 606

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           ME  G+  +  TY+ L++     G   + L L++EM  + ++P+  T+  +L
Sbjct: 607 MEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIML 658



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 136/468 (29%), Positives = 230/468 (49%), Gaps = 4/468 (0%)

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG-L 300
           ++ TY+ ++D  C+       L L   +   G   + +T + L+         E+A   L
Sbjct: 156 TVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVL 215

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA--PTLATYNILIYGL 358
           +  M +LG   +  SY+ I+ G  +  +   AL+L + M   G A  P +  YN +I+G 
Sbjct: 216 LHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGF 275

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
            K G    A   F EM R+ V PD+++YN ++   C++  + +A L+  ++ +    P  
Sbjct: 276 FKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDT 335

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           VTYN +I G    G L+ A ++   M ++G++P+++     +   CK G    A E F+ 
Sbjct: 336 VTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDS 395

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M  KG +PD  +Y T + G    G  ++   L   M + G   D   +N+L+H   K G 
Sbjct: 396 MTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGM 455

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           +++A  +  +M   G  PD +TY+++I A   MG L    + FN M+ +G+ P    Y  
Sbjct: 456 VDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHS 515

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGI-RPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           +I      G L  A    SEM  KGI RP+++ +N++IN LC+  R+  A+ +F  + + 
Sbjct: 516 IIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDI 575

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           G  P+  T+T LI+  C  G   +A ++   M    +E D  T+S LL
Sbjct: 576 GERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLL 623



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 141/521 (27%), Positives = 244/521 (46%), Gaps = 47/521 (9%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y     +++   +F KM   GL+P++  CN  +  L  +G S +A E++  M   G KP 
Sbjct: 345 YATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPD 404

Query: 243 IVTY-----------------------------------NTMLDSFCKEGEMQEALELLW 267
           IV+Y                                   N ++ ++ K G + +A+ +  
Sbjct: 405 IVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFT 464

Query: 268 EMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKG 327
           EMQ +G SP+ VTY+ +I+ FSR G L  A      M+  G++ +   Y+ II G+   G
Sbjct: 465 EMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHG 524

Query: 328 LLVEALNLEEEMVTRGVA-PTLATYNILIYGLCKWGRVSDARHRFFEMLRK-NVIPDIIS 385
            LV+A  L  EM+ +G+  P +  +N +I  LCK GRV DA H  F+++      PD+I+
Sbjct: 525 GLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDA-HDIFDLVTDIGERPDVIT 583

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           + +L+ GYC  G + +AF + D +    +   +VTY+TL+DG  + G +     L   M 
Sbjct: 584 FTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQ 643

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
            +G+ P+ +TY IM+ G  + G    AR+ F+EM+  G       Y   + G  +     
Sbjct: 644 RKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCAD 703

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           EA  L +++        +   N +++ + K+   EEA EL   +   G +P+  TY  +I
Sbjct: 704 EAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMI 763

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
              L+ G +    ++F++M + G+ P       +I     +G +  A  Y S++  K I 
Sbjct: 764 INLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRIL 823

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
               T + +++   R  +  +      DM+   +LP KY +
Sbjct: 824 LEASTTSLMLSLFSRKGKYHE------DMK---LLPAKYNF 855



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 117/373 (31%), Positives = 184/373 (49%), Gaps = 11/373 (2%)

Query: 350 TYNILIYGLCKWGRVSDA----RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           T + L+  LC   R  +A     HR  E+     +P++ SY+ +L G C +     A  L
Sbjct: 194 TASTLLKCLCYANRTEEAVNVLLHRMSEL---GCVPNVFSYSIILKGLCDNSMSQRALDL 250

Query: 406 FDELRSRN--LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
           F  +        P VV YNT+I G  + G+   A  L   M  QG+ PDV+TY ++++  
Sbjct: 251 FQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDAL 310

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
           CK   +  A     +M   G QPD   Y   I G   LG   EA ++  +M ++G  P++
Sbjct: 311 CKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNI 370

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
           +  N  +  LCK G  +EA E+   M   G  PD ++Y +++H     G       LFN+
Sbjct: 371 VICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNS 430

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           M   G++     + +LIHA+A RG ++ A + F+EMQ +G+ P+V+TY+ +I+   R+ R
Sbjct: 431 MKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGR 490

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI-EPDYCTHS 702
           +  A   F  M   GI PN   Y  +I   C  G   +A  L  EM+++ I  PD    +
Sbjct: 491 LTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFN 550

Query: 703 ALLLKQLDKDYKV 715
           + ++  L KD +V
Sbjct: 551 S-VINSLCKDGRV 562



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 3/215 (1%)

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEA-NELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           +L  G     IT + L+  LC     EEA N LL +M   G +P+  +Y+ I+    +  
Sbjct: 183 ILRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNS 242

Query: 573 DLRRGRDLFNNMLRKG--LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
             +R  DLF  M ++G   SP +V Y  +IH     G    A   F EM  +G++P+V+T
Sbjct: 243 MSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVT 302

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           YN +I+ LC+ R +D+A  +   M   G  P+  TY  +I+     G  +EA +++++M 
Sbjct: 303 YNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMK 362

Query: 691 DREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
            R + P+    ++ L           A E  +S+T
Sbjct: 363 SRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMT 397



 Score = 46.6 bits (109), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 60/279 (21%), Positives = 112/279 (40%), Gaps = 68/279 (24%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSA----YWVVE--TVVCVNMHGILD 160
            L  FR ++ + GVK +   +  +L  L  +G   +A    + ++E  T V V+++GI  
Sbjct: 635 GLTLFREMQ-RKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGI-- 691

Query: 161 VLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRD 220
             I GGL                 + +  ++ +++F K                      
Sbjct: 692 --ILGGL----------------CRNNCADEAIILFQK---------------------- 711

Query: 221 NGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVT 280
                        +G   +K SI   NTM+++  K    +EA EL   +   G  PN  T
Sbjct: 712 -------------LGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNEST 758

Query: 281 YNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV 340
           Y V+I    ++G +E A  +   M K G+   +   N II    EKG + +A N   ++ 
Sbjct: 759 YGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVD 818

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSD------ARHRFFE 373
            + +    +T ++++    + G+  +      A++ FF+
Sbjct: 819 GKRILLEASTTSLMLSLFSRKGKYHEDMKLLPAKYNFFD 857


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 153/531 (28%), Positives = 284/531 (53%), Gaps = 3/531 (0%)

Query: 189  VEQCLLVFNKMLRNGLLPDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
            ++  + +F +M+++   P +   ++++  + + N F V    +   M   GI  +  TY+
Sbjct: 676  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDV-VISLGEQMQNLGIPHNHYTYS 734

Query: 248  TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
             +++ FC+  ++  AL +L +M   G  PN VT + L+ G+  +  + +A  L+  M   
Sbjct: 735  ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 794

Query: 308  GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
            G + +  ++N +I G        EA+ L + MV +G  P L TY +++ GLCK G    A
Sbjct: 795  GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 854

Query: 368  RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
             +   +M +  + P ++ YNT++ G C+  ++ +A  LF E+ ++ + P VVTY++LI  
Sbjct: 855  FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 914

Query: 428  LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
            LC YG    A +L  +MI + I PDV T++ +++   K G L  A + ++EM+++ + P 
Sbjct: 915  LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 974

Query: 488  RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
               Y++ I G        EA ++ E M++K   PD++TYN L+ G CK   +EE  E+ R
Sbjct: 975  IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 1034

Query: 548  KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
            +M   G + + +TY  +I    + GD    +++F  M+  G+ P ++TY  L+      G
Sbjct: 1035 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 1094

Query: 608  RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
            +LE A + F  +Q   + P + TYN +I G+C+  +++  + LF ++  +G+ P+   Y 
Sbjct: 1095 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 1154

Query: 668  ILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQL-DKDYKVHA 717
             +I+  C  G+ +EA  L+KEM +    P+   ++ L+  +L D D +  A
Sbjct: 1155 TMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA 1205



 Score =  271 bits (693), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 156/499 (31%), Positives = 263/499 (52%), Gaps = 10/499 (2%)

Query: 178  LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGF--SVKAREVYRMMG 235
            +L+  + ++S +   L V  KM++ G  P++   + ++     NG+  S +  E   ++ 
Sbjct: 735  ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLL-----NGYCHSKRISEAVALVD 789

Query: 236  EF---GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
            +    G +P+ VT+NT++       +  EA+ L+  M  +GC P+ VTY V++ G  + G
Sbjct: 790  QMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG 849

Query: 293  ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
            + + A  L+  M +  L+     YN II G  +   + +ALNL +EM T+G+ P + TY+
Sbjct: 850  DTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYS 909

Query: 353  ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
             LI  LC +GR SDA     +M+ + + PD+ +++ L+  + + G + EA  L+DE+  R
Sbjct: 910  SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 969

Query: 413  NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
            ++ P++VTY++LI+G C +  L+ A+Q+ E M+++   PDV+TY  ++ G CK   +   
Sbjct: 970  SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 1029

Query: 473  REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
             E F EM ++GL  +   Y   I G  + GD   A  + +EM++ G PP+++TYN L+ G
Sbjct: 1030 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 1089

Query: 533  LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
            LCK G LE+A  +   +      P   TY  +I    + G +  G DLF N+  KG+ P 
Sbjct: 1090 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 1149

Query: 593  LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
            +V Y  +I     +G  E A   F EM+  G  PN   YN LI    R    + +  L  
Sbjct: 1150 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIK 1209

Query: 653  DMEEEGILPNKYTYTILIN 671
            +M   G   +  T  ++ N
Sbjct: 1210 EMRSCGFAGDASTIGLVTN 1228



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 176/696 (25%), Positives = 324/696 (46%), Gaps = 77/696 (11%)

Query: 72  AFCNNRWVSDHFQAVVS------DPELLV--RVLNRIREKPRI--ALRFFRWVETQPGVK 121
            FC    VSD    V         P+++    +++ + +  R+  A  FF+ +E + G++
Sbjct: 267 GFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIE-RKGIR 325

Query: 122 RDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLL 181
            +   +  ++     +GL  S+ W        +   +L  +I   ++   ++     LL 
Sbjct: 326 PNVVTYTALV-----NGLCNSSRWS-------DAARLLSDMIKKKITP--NVITYSALLD 371

Query: 182 IYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKP 241
            + K   V +   +F +M+R  + PD+   + +I  L  +    +A +++ +M   G   
Sbjct: 372 AFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLA 431

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
            +V+YNT+++ FCK   +++ ++L  EM  RG   N VTYN LI GF + G++++A+   
Sbjct: 432 DVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFF 491

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
             M   G+     +YN ++ G  + G L +AL + E+M  R +   + TY  +I G+CK 
Sbjct: 492 SQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKT 551

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           G+V +A   F  +  K + PDI++Y T++ G C  G + E   L+ +++   L+    T 
Sbjct: 552 GKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL 611

Query: 422 N-------------------------TLIDGLCRYG------------------------ 432
           +                          +  G+C+                          
Sbjct: 612 SDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGL 671

Query: 433 ---DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
               L+ A  L   M+     P +I ++ +++   KM    +      +M   G+  + +
Sbjct: 672 SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHY 731

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
            Y+  I    +      A  +  +M+  G+ P+++T + L++G C    + EA  L+ +M
Sbjct: 732 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 791

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRL 609
              G+ P+ +T+ ++IH             L + M+ KG  P LVTY V+++    RG  
Sbjct: 792 FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT 851

Query: 610 ELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL 669
           +LAF   ++M+   + P V+ YN +I+GLC+ + +D A  LF +ME +GI PN  TY+ L
Sbjct: 852 DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 911

Query: 670 INENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           I+  CN G W +A RL  +M++R+I PD  T SAL+
Sbjct: 912 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALI 947



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 162/569 (28%), Positives = 274/569 (48%), Gaps = 52/569 (9%)

Query: 189  VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
            +E+ L++F  M +  +  D+     +I+ +   G   +A  ++  +   G+KP IVTY T
Sbjct: 519  LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTT 578

Query: 249  MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYN-------------VLITGF------- 288
            M+   C +G + E   L  +M+  G   N  T +             +L  G+       
Sbjct: 579  MMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKD 638

Query: 289  ----------------------------SRNG----ELEQARGLIRDMLKLGLKVSAHSY 316
                                        SRNG    +L+ A  L  +M+K     S   +
Sbjct: 639  IKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEF 698

Query: 317  NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
            + ++   ++       ++L E+M   G+     TY+ILI   C+  ++  A     +M++
Sbjct: 699  SKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMK 758

Query: 377  KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
                P+I++ ++LL GYC S  I EA  L D++      P  VT+NTLI GL  +     
Sbjct: 759  LGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASE 818

Query: 437  AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
            A  L + M+ +G  PD++TY ++VNG CK G+  +A    N+M +  L+P    Y T I 
Sbjct: 819  AMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIID 878

Query: 497  GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
            G  K     +A  L +EM  KG  P+++TY+ L+  LC  G   +A+ LL  M+     P
Sbjct: 879  GLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP 938

Query: 557  DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
            D  T++++I A ++ G L     L++ M+++ + P++VTY+ LI+      RL+ A   F
Sbjct: 939  DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 998

Query: 617  SEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNA 676
              M  K   P+V+TYN LI G C+ +R+++   +F +M + G++ N  TY ILI     A
Sbjct: 999  EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 1058

Query: 677  GNWQEALRLYKEMLDREIEPDYCTHSALL 705
            G+   A  ++KEM+   + P+  T++ LL
Sbjct: 1059 GDCDMAQEIFKEMVSDGVPPNIMTYNTLL 1087



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 133/440 (30%), Positives = 237/440 (53%), Gaps = 8/440 (1%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE----FGIKPSIVTYNTML 250
           +F+ M+++   P + + NR++  +      +K  +V   +G+     GI+  + T+N ++
Sbjct: 175 LFSDMVKSRPFPSIVDFNRLLSAI----VKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 230

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
           + FC   ++  AL +L +M   G  P+ VT   L+ GF R   +  A  L+  M+++G K
Sbjct: 231 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 290

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
               +YN II    +   + +A +  +E+  +G+ P + TY  L+ GLC   R SDA   
Sbjct: 291 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 350

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
             +M++K + P++I+Y+ LL  + ++G + EA  LF+E+   ++ P +VTY++LI+GLC 
Sbjct: 351 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCL 410

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
           +  ++ A Q+ + M+++G L DV++Y  ++NG CK   +    + F EM ++GL  +   
Sbjct: 411 HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVT 470

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           Y T I G  + GD  +A     +M   G  PD+ TYN+L+ GLC  G LE+A  +   M 
Sbjct: 471 YNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ 530

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
                 D +TYT++I    + G +     LF ++  KGL P +VTYT ++     +G L 
Sbjct: 531 KREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLH 590

Query: 611 LAFMYFSEMQVKGIRPNVIT 630
                +++M+ +G+  N  T
Sbjct: 591 EVEALYTKMKQEGLMKNDCT 610



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 135/485 (27%), Positives = 248/485 (51%), Gaps = 15/485 (3%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PSIV +N +L +  K  +    + L  +M+  G   +  T+N++I  F    ++  A  +
Sbjct: 186 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 245

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  MLKLG +    +   ++ G+  +  + +A++L ++MV  G  P +  YN +I  LCK
Sbjct: 246 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 305

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
             RV+DA   F E+ RK + P++++Y  L+ G C S    +A  L  ++  + + P V+T
Sbjct: 306 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 365

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y+ L+D   + G +  A++L E M+   I PD++TY+ ++NG C    +  A + F+ M+
Sbjct: 366 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 425

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            KG   D  +Y T I G  K     +  +L  EM  +G   + +TYN L+ G  + G ++
Sbjct: 426 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 485

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           +A E   +M   G  PD  TY  ++    + G+L +   +F +M ++ +   +VTYT +I
Sbjct: 486 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 545

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                 G++E A+  F  + +KG++P+++TY  +++GLC    + +   L+  M++EG++
Sbjct: 546 RGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLM 605

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
            N  T +         G+   +  L K+ML        C ++  LLK +       A+  
Sbjct: 606 KNDCTLS--------DGDITLSAELIKKMLS-------CGYAPSLLKDIKSGVCKKALSL 650

Query: 721 LESLT 725
           L + +
Sbjct: 651 LRAFS 655



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 143/552 (25%), Positives = 266/552 (48%), Gaps = 57/552 (10%)

Query: 195  VFNKMLRNG----LLPDVKN--CNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
            +  KML  G    LL D+K+  C + + +LR   FS K    YR           ++ N 
Sbjct: 622  LIKKMLSCGYAPSLLKDIKSGVCKKALSLLR--AFSGKTSYDYR---------EKLSRNG 670

Query: 249  MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
            +      E ++ +A+ L  EM      P+ + ++ L++  ++  + +    L   M  LG
Sbjct: 671  L-----SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG 725

Query: 309  LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            +  + ++Y+ +I  +  +  L  AL +  +M+  G  P + T + L+ G C   R+S+A 
Sbjct: 726  IPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAV 785

Query: 369  HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
                +M      P+ +++NTL++G        EA  L D + ++   P +VTY  +++GL
Sbjct: 786  ALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGL 845

Query: 429  CRYGDLEVA-------QQLK----------------------------ENMINQGILPDV 453
            C+ GD ++A       +Q K                            + M  +GI P+V
Sbjct: 846  CKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNV 905

Query: 454  ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
            +TY+ +++  C  G  S A    ++M+ + + PD F ++  I   +K G   EA +L +E
Sbjct: 906  VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 965

Query: 514  MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
            M+ +   P ++TY+ L++G C    L+EA ++   MV     PD +TY ++I    +   
Sbjct: 966  MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 1025

Query: 574  LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
            +  G ++F  M ++GL    VTY +LI      G  ++A   F EM   G+ PN++TYN 
Sbjct: 1026 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 1085

Query: 634  LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
            L++GLC+  ++++A  +F  ++   + P  YTY I+I   C AG  ++   L+  +  + 
Sbjct: 1086 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 1145

Query: 694  IEPDYCTHSALL 705
            ++PD   ++ ++
Sbjct: 1146 VKPDVVAYNTMI 1157



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 184/378 (48%), Gaps = 35/378 (9%)

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR---------SGNIGEAFLLFDELRSRN 413
           +++DA   F +M++    P I+ +N LL    +          G   E   + ++L + N
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 227

Query: 414 LV--------------------------PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
           +V                          P  VT  +L++G CR   +  A  L + M+  
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 287

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
           G  PD++ Y  +++  CK   ++ A +FF E+ RKG++P+   YT  + G       S+A
Sbjct: 288 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 347

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
            RL  +M+ K   P++ITY+ L+    K G + EA EL  +MV     PD +TY+S+I+ 
Sbjct: 348 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 407

Query: 568 SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
                 +     +F+ M+ KG    +V+Y  LI+      R+E     F EM  +G+  N
Sbjct: 408 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 467

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYK 687
            +TYN LI G  +   +D+A   F  M+  GI P+ +TY IL+   C+ G  ++AL +++
Sbjct: 468 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 527

Query: 688 EMLDREIEPDYCTHSALL 705
           +M  RE++ D  T++ ++
Sbjct: 528 DMQKREMDLDIVTYTTVI 545



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 166/311 (53%)

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
           R   + +A  LF ++      P++V +N L+  + +    +V   L + M   GI  D+ 
Sbjct: 165 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 224

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
           T+ I++N  C    +S+A     +ML+ G +PDR    + + G  +    S+A  L ++M
Sbjct: 225 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 284

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
           +  G+ PD++ YN ++  LCK   + +A +  +++   G  P+ +TYT++++        
Sbjct: 285 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 344

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
                L ++M++K ++P ++TY+ L+ A    G++  A   F EM    I P+++TY++L
Sbjct: 345 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 404

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           INGLC   RID+A  +F  M  +G L +  +Y  LIN  C A   ++ ++L++EM  R +
Sbjct: 405 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 464

Query: 695 EPDYCTHSALL 705
             +  T++ L+
Sbjct: 465 VSNTVTYNTLI 475



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 114/227 (50%), Gaps = 3/227 (1%)

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
           ++KL D   A  L  +M+     P ++ +N L+  + KL   +    L +KM   G   D
Sbjct: 166 DIKLND---AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRND 222

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
             T+  +I+       +     +   ML+ G  P  VT   L++    R R+  A     
Sbjct: 223 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 282

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
           +M   G +P+++ YNA+I+ LC+ +R++ A+  F ++E +GI PN  TYT L+N  CN+ 
Sbjct: 283 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 342

Query: 678 NWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
            W +A RL  +M+ ++I P+  T+SALL   +     + A E  E +
Sbjct: 343 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 389


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 153/531 (28%), Positives = 284/531 (53%), Gaps = 3/531 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
           ++  + +F +M+++   P +   ++++  + + N F V    +   M   GI  +  TY+
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDV-VISLGEQMQNLGIPHNHYTYS 120

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
            +++ FC+  ++  AL +L +M   G  PN VT + L+ G+  +  + +A  L+  M   
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           G + +  ++N +I G        EA+ L + MV +G  P L TY +++ GLCK G    A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
            +   +M +  + P ++ YNT++ G C+  ++ +A  LF E+ ++ + P VVTY++LI  
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           LC YG    A +L  +MI + I PDV T++ +++   K G L  A + ++EM+++ + P 
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              Y++ I G        EA ++ E M++K   PD++TYN L+ G CK   +EE  E+ R
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
           +M   G + + +TY  +I    + GD    +++F  M+  G+ P ++TY  L+      G
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
           +LE A + F  +Q   + P + TYN +I G+C+  +++  + LF ++  +G+ P+   Y 
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 540

Query: 668 ILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQL-DKDYKVHA 717
            +I+  C  G+ +EA  L+KEM +    P+   ++ L+  +L D D +  A
Sbjct: 541 TMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA 591



 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 156/499 (31%), Positives = 263/499 (52%), Gaps = 10/499 (2%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGF--SVKAREVYRMMG 235
           +L+  + ++S +   L V  KM++ G  P++   + ++     NG+  S +  E   ++ 
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLL-----NGYCHSKRISEAVALVD 175

Query: 236 EF---GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
           +    G +P+ VT+NT++       +  EA+ L+  M  +GC P+ VTY V++ G  + G
Sbjct: 176 QMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG 235

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
           + + A  L+  M +  L+     YN II G  +   + +ALNL +EM T+G+ P + TY+
Sbjct: 236 DTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYS 295

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
            LI  LC +GR SDA     +M+ + + PD+ +++ L+  + + G + EA  L+DE+  R
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
           ++ P++VTY++LI+G C +  L+ A+Q+ E M+++   PDV+TY  ++ G CK   +   
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
            E F EM ++GL  +   Y   I G  + GD   A  + +EM++ G PP+++TYN L+ G
Sbjct: 416 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           LCK G LE+A  +   +      P   TY  +I    + G +  G DLF N+  KG+ P 
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
           +V Y  +I     +G  E A   F EM+  G  PN   YN LI    R    + +  L  
Sbjct: 536 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIK 595

Query: 653 DMEEEGILPNKYTYTILIN 671
           +M   G   +  T  ++ N
Sbjct: 596 EMRSCGFAGDASTIGLVTN 614



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 135/422 (31%), Positives = 224/422 (53%), Gaps = 4/422 (0%)

Query: 288 FSRNG----ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG 343
            SRNG    +L+ A  L  +M+K     S   ++ ++   ++       ++L E+M   G
Sbjct: 52  LSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG 111

Query: 344 VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF 403
           +     TY+ILI   C+  ++  A     +M++    P+I++ ++LL GYC S  I EA 
Sbjct: 112 IPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAV 171

Query: 404 LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
            L D++      P  VT+NTLI GL  +     A  L + M+ +G  PD++TY ++VNG 
Sbjct: 172 ALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGL 231

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
           CK G+  +A    N+M +  L+P    Y T I G  K     +A  L +EM  KG  P++
Sbjct: 232 CKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNV 291

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
           +TY+ L+  LC  G   +A+ LL  M+     PD  T++++I A ++ G L     L++ 
Sbjct: 292 VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 351

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           M+++ + P++VTY+ LI+      RL+ A   F  M  K   P+V+TYN LI G C+ +R
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 411

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSA 703
           +++   +F +M + G++ N  TY ILI     AG+   A  ++KEM+   + P+  T++ 
Sbjct: 412 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 471

Query: 704 LL 705
           LL
Sbjct: 472 LL 473



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 138/528 (26%), Positives = 246/528 (46%), Gaps = 76/528 (14%)

Query: 218 LRDNGFS-VKAREVYRMMGEFGIK----PSIVTYNTMLDSFCKEGEMQEALELLWEMQGR 272
           L  NG S +K  +   + GE  +K    PSI+ ++ +L +  K  +    + L  +MQ  
Sbjct: 52  LSRNGLSELKLDDAVALFGEM-VKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNL 110

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA 332
           G   N  TY++LI  F R  +L  A  ++  M+KLG +                      
Sbjct: 111 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYE---------------------- 148

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
                        P + T + L+ G C   R+S+A     +M      P+ +++NTL++G
Sbjct: 149 -------------PNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHG 195

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA-------QQLK---- 441
                   EA  L D + ++   P +VTY  +++GLC+ GD ++A       +Q K    
Sbjct: 196 LFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPG 255

Query: 442 ------------------------ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
                                   + M  +GI P+V+TY+ +++  C  G  S A    +
Sbjct: 256 VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 315

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           +M+ + + PD F ++  I   +K G   EA +L +EM+ +   P ++TY+ L++G C   
Sbjct: 316 DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 375

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            L+EA ++   MV     PD +TY ++I    +   +  G ++F  M ++GL    VTY 
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYN 435

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           +LI      G  ++A   F EM   G+ PN++TYN L++GLC+  ++++A  +F  ++  
Sbjct: 436 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 495

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            + P  YTY I+I   C AG  ++   L+  +  + ++PD   ++ ++
Sbjct: 496 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMI 543


>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 884

 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 207/747 (27%), Positives = 353/747 (47%), Gaps = 78/747 (10%)

Query: 11  LSAHSYH----------YFYLKKVRFFFPFCFSVHTYPSISESNNKDSVLNPESESYYKE 60
           L AHSYH          YFY      F PFC S   Y S S ++N+  +L  E     K+
Sbjct: 55  LGAHSYHSQPSNSQSFDYFYQ-----FSPFCHSNSNYLS-SLNSNERRILVVELSKLIKQ 108

Query: 61  ---LIISTVEEKPWAFCNNRWVSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQ 117
               I+ +  +K   FC               P  LV+++ ++ E  + A  FF+ +  Q
Sbjct: 109 GKGYILKSFSQK---FC---------------PFFLVKIM-KLLESRQSAFAFFK-LAFQ 148

Query: 118 PGVKRDEFVFCTILEILIESGLLRSAY----WVVETV-----------VCVNMH------ 156
                     C    IL    L   A     WV+  +           +  N H      
Sbjct: 149 NDSDATVHSCCIAAHILAAESLQLLAQDVISWVIRRIGASRSAHLVEFMWANHHKYESDF 208

Query: 157 GILDVLIGGGLSSCVSIKILDLLLLI--------YTKKSMVEQCLL----------VFNK 198
            IL+ L+ G ++S ++ + L++L  +         +  S++ + LL          +   
Sbjct: 209 SILNTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRG 268

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           M+R+G  P   N N +I      G+   A  +  +M +F  +P +  YN +++++   G 
Sbjct: 269 MIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGR 328

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
             +AL  L  M   GC P+ +T++ +IT F   G + +AR +   + ++GL  +   YN 
Sbjct: 329 TSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNT 388

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           ++ GY +   + +A  L EEM  +G+AP  AT+NIL+ G  K+G+ +D+   F +    +
Sbjct: 389 LMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSS 448

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
           ++PD   Y+  + G C +G + EA    +++  + + P+VV +N++I    R G  + A 
Sbjct: 449 LVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAH 508

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
           +  + M+  G++P   T + M+ G  K G L  AR+   +M+ KGL  ++ A+T  + G 
Sbjct: 509 KAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGY 568

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
            K+GDT+ A+ L  EM A+G  PD I ++  + GL K G +EEA E   +M   GF+P++
Sbjct: 569 FKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNN 628

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
             Y S+IH     G L     L   M +KGL P + T  ++I+     GR++ AF  F+E
Sbjct: 629 FVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAE 688

Query: 619 MQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGN 678
           M   G+ P+ +TYN LI G C++  +  A      M   G  P+  TY I I   C++  
Sbjct: 689 MHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQK 748

Query: 679 WQEALRLYKEMLDREIEPDYCTHSALL 705
              A+ +  E++   + P+  T++ ++
Sbjct: 749 ISRAVTMLDELIAVGVVPNTVTYNTMM 775



 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 149/551 (27%), Positives = 275/551 (49%), Gaps = 2/551 (0%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           ++L+  Y  +      L   + M++NG  P +   + II    + G  V+AR+++  + E
Sbjct: 317 NILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQE 376

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G+ P++  YNT++  + K  ++ +A  L  EM+ +G +P+G T+N+L+ G  + G+   
Sbjct: 377 VGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEAD 436

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           +  L RD     L      Y+  + G    G L EA+   E+M+ +G+ P++  +N +I 
Sbjct: 437 SYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIA 496

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
              + G   +A   +  ML   ++P   + +++L G  + G + EA  L  ++  + L  
Sbjct: 497 AYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPV 556

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
             V +  L+DG  + GD   A  L   M  +GI PD I ++  ++G  K G +  A E F
Sbjct: 557 NKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAF 616

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           +EM +KG  P+ F Y + I G    G   EA +L+ EM  KG  PD+ T N++++G CK 
Sbjct: 617 SEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKE 676

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G ++ A +   +M   G  PD +TY ++I    ++ D+    +  N M   G  P + TY
Sbjct: 677 GRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTY 736

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
            + I    +  ++  A     E+   G+ PN +TYN ++N +C    +D+A  L   + +
Sbjct: 737 NIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVCT-DMLDRAMVLTAKLLK 795

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVH 716
              +PN  T  +L++  C  G  ++AL ++ + L++ +  D+  +  + +  +DK     
Sbjct: 796 MAFVPNVVTTNVLLSHFCKQGMPEKAL-IWGQKLNKLLRADFIGYWLVYILSMDKQATAG 854

Query: 717 AVEYLESLTLG 727
           + +++  L LG
Sbjct: 855 STKFIYWLMLG 865



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 153/533 (28%), Positives = 260/533 (48%), Gaps = 17/533 (3%)

Query: 99  RIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGI 158
           RIR +   AL F   +  + G K     F TI+      G +  A  + E        GI
Sbjct: 324 RIRGRTSDALGFLH-LMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFE--------GI 374

Query: 159 LDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL 218
            +V    GLS   ++ + + L+  Y K   V Q  +++ +M   G+ PD    N ++   
Sbjct: 375 QEV----GLSP--NVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGN 428

Query: 219 RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNG 278
              G    + E++R      + P    Y+  +   C  G++ EA++ L +M  +G  P+ 
Sbjct: 429 YKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSV 488

Query: 279 VTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
           V +N +I  +SR G  + A    + ML  GL  S+ + + ++ G S+KG L EA +L  +
Sbjct: 489 VAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYK 548

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
           M+ +G+      + +L+ G  K G  + A   ++EM  + + PD I+++  + G  ++G 
Sbjct: 549 MIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGL 608

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           + EA+  F E+  +  VP    YN+LI GLC  G L  A +L+  M  +G+LPD+ T  I
Sbjct: 609 VEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNI 668

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           ++NG CK G +  A + F EM   G+ PD   Y T I G  K+ D   A     +M A G
Sbjct: 669 IINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASG 728

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
           + PD+ TYN+ + G C    +  A  +L +++  G +P+ +TY ++++A +    L R  
Sbjct: 729 WDPDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNA-VCTDMLDRAM 787

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
            L   +L+    P +VT  VL+     +G  E A ++  ++  K +R + I Y
Sbjct: 788 VLTAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKALIWGQKLN-KLLRADFIGY 839


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 178/627 (28%), Positives = 307/627 (48%), Gaps = 17/627 (2%)

Query: 108 LRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSA--YWVVETVVCVNMHGI------L 159
           ++FF W+  +P  K +   F ++L  L+   +   A    ++    C N   I      L
Sbjct: 92  IQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFL 151

Query: 160 DVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLR 219
           + + G G     S+   + LL+   K  MVE    ++ +ML +G+ P +   N +I +L 
Sbjct: 152 NEISGMGFG--FSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILS 209

Query: 220 DNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGV 279
             G   +A  +   + ++ + P + TY +++   C+   +  A  +   M   GC PN V
Sbjct: 210 KKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSV 269

Query: 280 TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
           TY+ LI G    G +++A  ++ +M++ G++ + ++Y   I          EA+ L   M
Sbjct: 270 TYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARM 329

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
             RG  P + TY  LI GL + G++  A   + +ML++ ++P+ ++YN L+   C  G  
Sbjct: 330 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRF 389

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
             A  +F  +     +    TYN +I GLC  GD+E A  L E M+  G LP V+TY  +
Sbjct: 390 STALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTL 449

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           +NG    GN++ A    + M   G +PD + Y   ++G  K G    A    +EM+  G 
Sbjct: 450 INGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGL 509

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
            P+ ++Y  L+ G  K G ++ A  LL++M   G  P+  +Y ++I+   +         
Sbjct: 510 NPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEK 569

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
           + + M+ +GL P ++TYT LI      GR + AF  F +M+ +   PN+ TY++LI GLC
Sbjct: 570 ICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLC 629

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
           +  + D+A      M E G  P   TY+ L++  C  G + EA +L K+M +R   PD  
Sbjct: 630 QEGKADEAE----RMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDRE 685

Query: 700 THSALLL---KQLDKDYKVHAVEYLES 723
            + +LL+   K L+ D+ +     +E+
Sbjct: 686 IYYSLLIAHCKNLEVDHALKIFHSIEA 712



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 180/608 (29%), Positives = 294/608 (48%), Gaps = 21/608 (3%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G++     F T++ IL + G +R A  ++  +   ++    DV     L           
Sbjct: 193 GIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSP--DVFTYTSL----------- 239

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
            +L + +   ++    VF++M++ G  P+    + +I  L + G   +A ++   M E G
Sbjct: 240 -ILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKG 298

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           I+P++ TY   + + C     +EA+EL+  M+ RGC PN  TY  LI+G SR G+LE A 
Sbjct: 299 IEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAI 358

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
           GL   MLK GL  +  +YN +I      G    AL +   M   G      TYN +I GL
Sbjct: 359 GLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGL 418

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C  G +  A   F +ML+   +P +++YNTL+ GY   GN+  A  L D ++     P  
Sbjct: 419 CLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDE 478

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
            TYN L+ G  ++G LE A    + M+  G+ P+ ++YT +++G  K G + +A      
Sbjct: 479 WTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKR 538

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M   G  P+  +Y   I G  K    SEA ++ ++M+ +G  P++ITY  L+ GLC+ G 
Sbjct: 539 MEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGR 598

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
            + A ++   M     +P+  TY+S+I+   + G      D    M   G  PTL TY+ 
Sbjct: 599 TQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGK----ADEAERMSEIGCEPTLDTYST 654

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           L+     +GR   A     +M+ +G  P+   Y +L+   C+   +D A  +F  +E +G
Sbjct: 655 LVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKG 714

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL---LLKQLDKDYKV 715
              +   Y  LI   C AG  +EA  L+  ML++E   D    + L   LLK+ + D  +
Sbjct: 715 FQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCM 774

Query: 716 HAVEYLES 723
             +  +ES
Sbjct: 775 KLLHIMES 782



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 153/475 (32%), Positives = 239/475 (50%), Gaps = 4/475 (0%)

Query: 198 KMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG 257
           +M + G  P+V+    +I  L   G    A  +Y  M + G+ P+ VTYN +++  C  G
Sbjct: 328 RMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGG 387

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
               AL++   M+G G   N  TYN +I G    G++E+A  L   MLK+G   +  +YN
Sbjct: 388 RFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYN 447

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            +I GY  KG +  A  L + M   G  P   TYN L+ G  KWG++  A   F EM+  
Sbjct: 448 TLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVEC 507

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
            + P+ +SY  L+ G+ + G +  A  L   +      P V +YN +I+GL +      A
Sbjct: 508 GLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEA 567

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
           +++ + M+ QG+LP+VITYT +++G C+ G    A + F++M ++   P+ + Y++ I G
Sbjct: 568 EKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYG 627

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
             + G   EA R+ E     G  P L TY+ LV GLC+ G   EA +L++ M   GF PD
Sbjct: 628 LCQEGKADEAERMSE----IGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPD 683

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
              Y S++ A  +  ++     +F+++  KG    L  Y  LI A    G++E A   F 
Sbjct: 684 REIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFD 743

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
            M  K    + I +  L++GL +   +D    L   ME +   PN  TY IL  E
Sbjct: 744 NMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRE 798



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 135/407 (33%), Positives = 221/407 (54%), Gaps = 4/407 (0%)

Query: 193 LLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDS 252
           L +F+ M  +G L + +  N IIK L   G   KA  ++  M + G  P++VTYNT+++ 
Sbjct: 393 LKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLING 452

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
           +  +G +  A  LL  M+  GC P+  TYN L++GFS+ G+LE A    ++M++ GL  +
Sbjct: 453 YLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPN 512

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
             SY  +I G+S+ G +  AL+L + M   G  P + +YN +I GL K  R S+A     
Sbjct: 513 PVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICD 572

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
           +M+ + ++P++I+Y TL+ G CR+G    AF +F ++  R  +P + TY++LI GLC+ G
Sbjct: 573 KMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEG 632

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
             + A+++ E     G  P + TY+ +V+G C+ G    A +   +M  +G  PDR  Y 
Sbjct: 633 KADEAERMSE----IGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYY 688

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
           + +    K  +   A ++   + AKGF   L  Y  L+  LCK G +EEA  L   M+  
Sbjct: 689 SLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEK 748

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
            +  D I +T ++   L+ G+L     L + M  K  +P + TY +L
Sbjct: 749 EWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVIL 795



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 126/373 (33%), Positives = 195/373 (52%), Gaps = 4/373 (1%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +E+ +++F KML+ G LP V   N +I      G    A  +  +M E G +P   TYN 
Sbjct: 424 IEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNE 483

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++  F K G+++ A     EM   G +PN V+Y  LI G S++G+++ A  L++ M ++G
Sbjct: 484 LVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMG 543

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
              +  SYN +I G S++    EA  + ++MV +G+ P + TY  LI GLC+ GR   A 
Sbjct: 544 CNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAF 603

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F +M ++  +P++ +Y++L+YG C+ G   EA    + +      PT+ TY+TL+ GL
Sbjct: 604 KIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGL 659

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           CR G    A+QL ++M  +G  PD   Y  ++   CK   +  A + F+ +  KG Q   
Sbjct: 660 CRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHL 719

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             Y   I    K G   EA  L + ML K +  D I + VLV GL K G L+   +LL  
Sbjct: 720 SIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHI 779

Query: 549 MVGDGFIPDHITY 561
           M    F P+  TY
Sbjct: 780 MESKNFTPNIQTY 792



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 160/332 (48%), Gaps = 4/332 (1%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           ++K   +E     F +M+  GL P+  +   +I     +G    A  + + M E G  P+
Sbjct: 488 FSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPN 547

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           + +YN +++   KE    EA ++  +M  +G  PN +TY  LI G  RNG  + A  +  
Sbjct: 548 VESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFH 607

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           DM K     + ++Y+ +I G  ++G   EA    E M   G  PTL TY+ L+ GLC+ G
Sbjct: 608 DMEKRKCLPNLYTYSSLIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKG 663

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R  +A     +M  +   PD   Y +LL  +C++  +  A  +F  + ++     +  Y 
Sbjct: 664 RFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYR 723

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            LI  LC+ G +E AQ L +NM+ +    D I +T++V+G  K G L +  +  + M  K
Sbjct: 724 ALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESK 783

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
              P+   Y        ++G + E+  L +++
Sbjct: 784 NFTPNIQTYVILGRELSRIGKSIESEPLADKL 815



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 4/216 (1%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F+ M +   LP++   + +I  L   G   KA E  RM  E G +P++ TY+T++   C
Sbjct: 605 IFHDMEKRKCLPNLYTYSSLIYGLCQEG---KADEAERM-SEIGCEPTLDTYSTLVSGLC 660

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           ++G   EA +L+ +M+ RG  P+   Y  L+    +N E++ A  +   +   G ++   
Sbjct: 661 RKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLS 720

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
            Y  +IC   + G + EA  L + M+ +        + +L+ GL K G +         M
Sbjct: 721 IYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIM 780

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
             KN  P+I +Y  L     R G   E+  L D+L+
Sbjct: 781 ESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLK 816


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  280 bits (717), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 162/522 (31%), Positives = 279/522 (53%), Gaps = 3/522 (0%)

Query: 171 VSIKILDLLLLIYTKKSMVEQCL-LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE 229
           V+I I + LL  + +    ++ L ++ ++    G +PDV + + ++K L D G S +A +
Sbjct: 144 VNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADD 203

Query: 230 VYRMMGEFG--IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITG 287
           + RMM E G    P +V Y+T++D F KEG++ +A +L  EM  RG  P+ VTY+ ++  
Sbjct: 204 LLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHA 263

Query: 288 FSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPT 347
             +   +++A   +R M+  G+  +  +YN +I GYS  G   EA+ + +EM    + P 
Sbjct: 264 LCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 323

Query: 348 LATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFD 407
           + T ++L+  LCK+G++ +AR  F  M  K   P++ SY  +L GY   G + +   LFD
Sbjct: 324 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFD 383

Query: 408 ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG 467
            +    + P + T+N LI      G L+ A  +   M + G+ PDV+TY  ++   C++G
Sbjct: 384 LMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 443

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
            +  A E FN+M+ +G+ PD++AY   I G    G   +A  L  E++  G   D++ ++
Sbjct: 444 KMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFS 503

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
            +++ LCKLG + +A  +    V  G  P  + Y+ ++     +G + +   +F+ M+  
Sbjct: 504 SIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 563

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
           G+ P  V Y  L++ +   GR++     F EM  KGI+P+ I YN +I+GL    R   A
Sbjct: 564 GIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPA 623

Query: 648 YGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
              F +M E GI  NK TY I++        + EA+ L+KE+
Sbjct: 624 KVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKEL 665



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 157/506 (31%), Positives = 264/506 (52%), Gaps = 38/506 (7%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR-GCSPNGVTYNVLITGFSRNGELEQ 296
           G++ +I+  N +L  FC+     EAL++L       GC P+  +Y++L+      G+  Q
Sbjct: 141 GLRVNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQ 200

Query: 297 ARGLIRDMLKLGLKVSAH--SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           A  L+R M + G   S    +Y+ +I G+ ++G + +A +L +EMV RG+ P   TY+ +
Sbjct: 201 ADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSV 260

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           ++ LCK   +  A     +M+ K V+P+  +YN L+YGY  +G   EA  +F E+R  ++
Sbjct: 261 VHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI 320

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG----SC------ 464
           +P VVT + L+  LC+YG ++ A+ + + M  +G  P+V +YTIM+NG     C      
Sbjct: 321 LPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTD 380

Query: 465 -------------------------KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
                                      G L  A   FNEM   G++PD   Y T IA   
Sbjct: 381 LFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALC 440

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           ++G   +A     +M+ +G  PD   Y+ L+ G C  GSL +A EL+ +++ +G   D +
Sbjct: 441 RIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIV 500

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
            ++SII+   ++G +   +++F+  +  GL PT V Y++L+  +   G++E A   F  M
Sbjct: 501 FFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAM 560

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
              GI PN + Y  L+NG C++ RID+   LF +M ++GI P+   Y I+I+    AG  
Sbjct: 561 VSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRT 620

Query: 680 QEALRLYKEMLDREIEPDYCTHSALL 705
             A   + EM +  I  + CT++ +L
Sbjct: 621 VPAKVKFHEMTESGIAMNKCTYNIVL 646



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 142/503 (28%), Positives = 250/503 (49%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y+     ++ + VF +M R+ +LPDV   + ++  L   G   +AR+V+  M   G  P+
Sbjct: 299 YSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPN 358

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           + +Y  ML+ +  +G + +  +L   M G G +P+  T+NVLI  ++  G L++A  +  
Sbjct: 359 VFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFN 418

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M   G+K    +Y  +I      G + +A+    +M+ +GVAP    Y+ LI G C  G
Sbjct: 419 EMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHG 478

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            +  A+    E++   +  DI+ +++++   C+ G + +A  +FD   +  L PT V Y+
Sbjct: 479 SLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYS 538

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            L+DG C  G +E A ++ + M++ GI P+ + Y  +VNG CK+G +      F EML+K
Sbjct: 539 MLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQK 598

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G++P    Y   I G  + G T  A     EM   G   +  TYN+++ GL K    +EA
Sbjct: 599 GIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEA 658

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             L +++       + IT  ++I    +   +   +DLF ++ R GL P +VTY+++I  
Sbjct: 659 IFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITN 718

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
               G +E A   FS MQ  G  P+    N ++  L +   I +A      ++E      
Sbjct: 719 LIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLE 778

Query: 663 KYTYTILINENCNAGNWQEALRL 685
             T  +L++   + G  +E +R 
Sbjct: 779 HLTTMLLVDLFSSKGTCREHIRF 801



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 132/475 (27%), Positives = 227/475 (47%), Gaps = 39/475 (8%)

Query: 270 QG-RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
           QG R  SP   TY +L+   +R    E A      +L+ GL+V+    N ++ G+ E   
Sbjct: 102 QGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKR 161

Query: 329 LVEALN-LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI--PDIIS 385
             EAL+ L       G  P + +Y+IL+  LC  G+   A      M     +  PD+++
Sbjct: 162 TDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVA 221

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           Y+T++ G+ + G++ +A  LF E+  R + P  VTY++++  LC+   ++ A+     M+
Sbjct: 222 YSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMV 281

Query: 446 NQG-----------------------------------ILPDVITYTIMVNGSCKMGNLS 470
           N+G                                   ILPDV+T ++++   CK G + 
Sbjct: 282 NKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIK 341

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            AR+ F+ M  KG  P+ F+YT  + G    G   +   L + ML  G  PD+ T+NVL+
Sbjct: 342 EARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLI 401

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
                 G L++A  +  +M   G  PD +TY ++I A   +G +    + FN M+ +G++
Sbjct: 402 KAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVA 461

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           P    Y  LI      G L  A    SE+   G+  +++ ++++IN LC+L R+  A  +
Sbjct: 462 PDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNI 521

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           F      G+ P    Y++L++  C  G  ++ALR++  M+   IEP+   +  L+
Sbjct: 522 FDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLV 576



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 151/320 (47%), Gaps = 15/320 (4%)

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGL--------CRYGD-LEVAQQLKENMINQG--- 448
           EA  L DEL+ R         N  +  L        CR G  L VA   +     QG   
Sbjct: 47  EAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAASRAQGPRV 106

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
           + P   TY I+++   +     +A  FF ++LR GL+ +       + G  +   T EA 
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEAL 166

Query: 509 R-LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI--PDHITYTSII 565
             L       G  PD+ +Y++L+  LC  G   +A++LLR M   G +  PD + Y+++I
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVI 226

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
               + GD+ +  DLF  M+++G+ P  VTY+ ++HA      ++ A  +  +M  KG+ 
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 286

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           PN  TYN LI G     +  +A  +F +M    ILP+  T ++L+   C  G  +EA  +
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 346

Query: 686 YKEMLDREIEPDYCTHSALL 705
           +  M  +   P+  +++ +L
Sbjct: 347 FDTMAMKGQNPNVFSYTIML 366


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  280 bits (717), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 161/484 (33%), Positives = 257/484 (53%), Gaps = 2/484 (0%)

Query: 241 PSIVTYNTMLDSFCKEGEM-QEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
           P    ++ ML S C E +M  E+ EL   M+  G  P+  + N+ +         E    
Sbjct: 109 PMKPLFSDMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQ 168

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
           L  ++++ GL+     Y   I    + G L  A+ L   M   GV+P +  YN++I GLC
Sbjct: 169 LFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLC 228

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
           K  R+ DA   F EML + V P+ I+YNTL+ GYC+ G + EAF + + ++  N+ PT++
Sbjct: 229 KEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTII 288

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
           T+N+L++GLCR   +E AQ++ E M   G +PD  TYT + +G  K GN+  +     E 
Sbjct: 289 TFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEA 348

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
           +RKG+Q   +  +  +    K G+  +A  + ++ L  G  P  + +N +V+G C++G +
Sbjct: 349 VRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDI 408

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
            +A   + KM   G  P+H+TY S++    EM ++         M+ KG+ P + TY  L
Sbjct: 409 NKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTL 468

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           I  +      +  F    EM+ KG++PNVI+Y  LIN LC+   I +A  +  DM   G+
Sbjct: 469 IDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGV 528

Query: 660 LPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVE 719
           +PN   Y +LI+ +C AG  ++A R + EM+ REI P   T++ +L+  L K  KV   E
Sbjct: 529 VPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYN-ILINGLCKKGKVMEAE 587

Query: 720 YLES 723
            L S
Sbjct: 588 NLAS 591



 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 168/568 (29%), Positives = 280/568 (49%), Gaps = 44/568 (7%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           D+LL I ++  MV +   ++  M ++G+LP V + N  ++ L          +++  + E
Sbjct: 116 DMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVE 175

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G++P    Y   + +  K G+++ A+EL+  M+  G SP    YNV+I G  +   ++ 
Sbjct: 176 SGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKD 235

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  L  +ML   +  +  +YN +I GY + G L EA N+ E M    V PT+ T+N L+ 
Sbjct: 236 AEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLN 295

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY----------------------- 393
           GLC+   + +A+    EM     +PD  +Y TL  G+                       
Sbjct: 296 GLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQI 355

Query: 394 ------------CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
                       C+ GN+ +A  +  +     L P  V +NT+++G C+ GD+  A    
Sbjct: 356 LDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTI 415

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
           E M   G+ P+ +TY  +V   C+M N+  A +   +M+ KG+ P+   Y T I G  + 
Sbjct: 416 EKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRS 475

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
                 +++ EEM  KG  P++I+Y  L++ LCK  ++ EA  +L  MV  G +P+   Y
Sbjct: 476 CLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIY 535

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
             +I  S   G L+     F+ M+ + + PTLVTY +LI+    +G++  A    SE+  
Sbjct: 536 NMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITR 595

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
           KG+  +VITYN+LI+G      + +A  L+  M++ GI P   TY  LI     AG  +E
Sbjct: 596 KGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLI-----AGCGKE 650

Query: 682 AL----RLYKEMLDREIEPDYCTHSALL 705
            L    ++Y+EML   + PD   ++AL+
Sbjct: 651 GLVLVEKIYQEMLQMNLVPDRVIYNALI 678



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 172/631 (27%), Positives = 298/631 (47%), Gaps = 63/631 (9%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGI------LD 160
            L+ F  +  + G++ D+F++   ++  ++ G L+ A   +E + C+   G+       +
Sbjct: 166 TLQLFSEI-VESGLRPDQFMYGKAIQAAVKLGDLKRA---IELMTCMKRGGVSPGVFVYN 221

Query: 161 VLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRD 220
           V+IGG                   K+  ++    +F++ML   + P+    N +I     
Sbjct: 222 VVIGG-----------------LCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCK 264

Query: 221 NGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVT 280
            G   +A  +   M    ++P+I+T+N++L+  C+   M+EA  +L EM+  G  P+  T
Sbjct: 265 VGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFT 324

Query: 281 YNVLITG-----------------------------------FSRNGELEQARGLIRDML 305
           Y  L  G                                     + G +E+A  +++  L
Sbjct: 325 YTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFL 384

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
           + GL      +N I+ GY + G + +A    E+M   G+ P   TYN L+   C+   + 
Sbjct: 385 ENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNME 444

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
           +A     +M+ K V+P++ +YNTL+ GY RS      F + +E+  + L P V++Y  LI
Sbjct: 445 EAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLI 504

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           + LC+  ++  A+ +  +M+++G++P+   Y ++++GSC  G L  A  FF+EM+ + + 
Sbjct: 505 NCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIV 564

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           P    Y   I G  K G   EA  L  E+  KG   D+ITYN L+ G    G++++A EL
Sbjct: 565 PTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALEL 624

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
              M   G  P   TY  +I    + G L     ++  ML+  L P  V Y  LIH +  
Sbjct: 625 YETMKKSGIKPTLNTYHRLIAGCGKEG-LVLVEKIYQEMLQMNLVPDRVIYNALIHCYVE 683

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
            G ++ A    S M+ +GI+P+ +TYN LI G  +  R+ +   L  DM+  G++P   T
Sbjct: 684 HGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTET 743

Query: 666 YTILINENCNAGNWQEALRLYKEMLDREIEP 696
           Y ILI  +C   ++  A   Y+EM +    P
Sbjct: 744 YDILIVGHCKLKDFDGAYVWYREMFENGFTP 774



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 143/450 (31%), Positives = 237/450 (52%), Gaps = 1/450 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V+  + +  + +R G+      C+ ++  L   G   KA EV +   E G+ P  V +NT
Sbjct: 338 VDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNT 397

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++ +C+ G++ +A   + +M+  G  PN VTYN L+  F     +E+A   I+ M++ G
Sbjct: 398 IVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKG 457

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           +  +  +YN +I GY    L      + EEM  +G+ P + +Y  LI  LCK   + +A 
Sbjct: 458 VLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAE 517

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               +M+ + V+P+   YN L+ G C +G + +AF  FDE+ +R +VPT+VTYN LI+GL
Sbjct: 518 VILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGL 577

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G +  A+ L   +  +G+  DVITY  +++G    GN+  A E +  M + G++P  
Sbjct: 578 CKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTL 637

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             Y   IAG  K G      ++ +EML     PD + YN L+H   + G +++A  L   
Sbjct: 638 NTYHRLIAGCGKEG-LVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSA 696

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M   G  PD +TY  +I    + G + + ++L N+M  +GL P   TY +LI  H     
Sbjct: 697 MEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKD 756

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGL 638
            + A++++ EM   G  P+V   + LI GL
Sbjct: 757 FDGAYVWYREMFENGFTPSVSICDNLITGL 786



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 122/401 (30%), Positives = 191/401 (47%), Gaps = 34/401 (8%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y +   + +      KM   GL P+    N ++K   +     +A +  + M E G+ P+
Sbjct: 402 YCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPN 461

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           + TYNT++D + +        ++L EM+ +G  PN ++Y  LI    ++  + +A  ++ 
Sbjct: 462 VETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILG 521

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           DM+  G+  +A  YN +I G    G L +A    +EMV R + PTL TYNILI GLCK G
Sbjct: 522 DMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKG 581

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFD--------------- 407
           +V +A +   E+ RK +  D+I+YN+L+ GY  +GN+ +A  L++               
Sbjct: 582 KVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYH 641

Query: 408 -------------------ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
                              E+   NLVP  V YN LI     +GD++ A  L   M  QG
Sbjct: 642 RLIAGCGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQG 701

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
           I PD +TY  ++ G  K G +   +   N+M  +GL P    Y   I G  KL D   AY
Sbjct: 702 IQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAY 761

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
               EM   GF P +   + L+ GL + G   +A+ +  +M
Sbjct: 762 VWYREMFENGFTPSVSICDNLITGLREEGRSHDADVICSEM 802



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/336 (30%), Positives = 171/336 (50%), Gaps = 1/336 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y +  + ++C  +  +M + GL P+V +   +I  L  +   ++A  +   M   G+ P+
Sbjct: 472 YGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPN 531

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
              YN ++D  C  G++++A     EM  R   P  VTYN+LI G  + G++ +A  L  
Sbjct: 532 AQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLAS 591

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           ++ + GL     +YN +I GYS  G + +AL L E M   G+ PTL TY+ LI G  K G
Sbjct: 592 EITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEG 651

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            V      + EML+ N++PD + YN L++ Y   G++ +A  L   + ++ + P  +TYN
Sbjct: 652 LVL-VEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYN 710

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            LI G  + G +   + L  +M  +G++P   TY I++ G CK+ +   A  ++ EM   
Sbjct: 711 CLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFEN 770

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           G  P        I G  + G + +A  +  EM  KG
Sbjct: 771 GFTPSVSICDNLITGLREEGRSHDADVICSEMNMKG 806


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 160/492 (32%), Positives = 252/492 (51%), Gaps = 5/492 (1%)

Query: 205 LPDVKNC--NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           LPD   C  N ++KVL   G    AR+++    E    P +VTY  ++  +C  GE++ A
Sbjct: 257 LPDKNVCSYNILLKVLCGAGRVEDARQLF---DEMASPPDVVTYGILIHGYCALGELENA 313

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
           ++LL +M  RG  PN   Y  ++      G +  A  ++ DM+   + +    Y  ++ G
Sbjct: 314 VKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSG 373

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
           +  KG LV A    +EM  +G+A    TY  LI GLC+ G + +A     EML + +  D
Sbjct: 374 FCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVD 433

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
            ++Y  L+ GYC+ G + EAF + + +  R + P VVTY  L DGLC+ GD++ A +L  
Sbjct: 434 EVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLH 493

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            M N+G+  +  TY  ++NG CK G L  A     +M   GL+PD + YTT I    K G
Sbjct: 494 EMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSG 553

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
           +   A+ L +EML  G  P ++TYNVL++G C  G +E   +LL  M+     P+  TY 
Sbjct: 554 ELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYN 613

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
           S++       +++   +++  M  + + P   TY +LI  H     ++ A  + +EM  K
Sbjct: 614 SLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEK 673

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
           G R    +Y+ALI  L + ++  +A  LF DM +EG       Y   I+ N N  N +  
Sbjct: 674 GFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEAT 733

Query: 683 LRLYKEMLDREI 694
           L L  E+++  I
Sbjct: 734 LALCDELVEASI 745



 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 165/474 (34%), Positives = 248/474 (52%), Gaps = 11/474 (2%)

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
           R + ++GI PS    N +L        + EA+EL   +  +    N  +YN+L+      
Sbjct: 224 RRVRQYGISPSPEACNAVLSRL----PLDEAIELFQGLPDK----NVCSYNILLKVLCGA 275

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G +E AR L  +M      V+   Y  +I GY   G L  A+ L ++MV RGV P    Y
Sbjct: 276 GRVEDARQLFDEMASPPDVVT---YGILIHGYCALGELENAVKLLDDMVARGVEPNATVY 332

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
             ++  LC  GRVSDA     +M+   VI D   Y T+L G+C  G++  A   FDE++ 
Sbjct: 333 TSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQR 392

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           + L    VTY TLI+GLCR G+L+ A+++ + M+ + +  D +TYT++V+G CK G ++ 
Sbjct: 393 KGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAE 452

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A +  N M+++G+ P+   YT    G  K GD   A  L  EM  KG   +  TYN L++
Sbjct: 453 AFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLIN 512

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           GLCK G L++A   +  M   G  PD  TYT++I A  + G+L R  DL   ML  G+ P
Sbjct: 513 GLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKP 572

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
           T+VTY VL++     GR+E        M  K I PN  TYN+L+   C    +     ++
Sbjct: 573 TIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIY 632

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             M    + PN+ TY ILI  +C A + +EA   + EM+++       ++SAL+
Sbjct: 633 KGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALI 686



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 119/412 (28%), Positives = 202/412 (49%), Gaps = 14/412 (3%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           GV+ +  V+ +++ +L + G +  A  VVE +V    H ++       L   V   +L  
Sbjct: 324 GVEPNATVYTSVVALLCDKGRVSDALTVVEDMV---HHKVI-------LDEAVYTTVLS- 372

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
               +  K  +      F++M R GL  D      +I  L   G   +A +V + M    
Sbjct: 373 ---GFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARR 429

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           +    VTY  ++D +CK G+M EA ++   M  RG +PN VTY  L  G  + G+++ A 
Sbjct: 430 LDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAAN 489

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L+ +M   GL+++A +YN +I G  + G L +A+    +M   G+ P + TY  LI  L
Sbjct: 490 ELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDAL 549

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           CK G +  A     EML   + P I++YN L+ G+C SG +     L + +  +N+ P  
Sbjct: 550 CKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNA 609

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
            TYN+L+   C   +++   ++ + M ++ + P+  TY I++ G CK  ++  A+ F NE
Sbjct: 610 TTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNE 669

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
           M+ KG +    +Y+  I    K     EA +L  +M  +GF  +   YN  +
Sbjct: 670 MIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYI 721



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 18/208 (8%)

Query: 517 KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
           K F  D  ++++L+  LC    L  A  LLR++   G  P         +A L    L  
Sbjct: 201 KAFSSDPASFDLLL--LC----LPSA-PLLRRVRQYGISPS----PEACNAVLSRLPLDE 249

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
             +LF  +  K     + +Y +L+      GR+E A   F EM      P+V+TY  LI+
Sbjct: 250 AIELFQGLPDK----NVCSYNILLKVLCGAGRVEDARQLFDEMASP---PDVVTYGILIH 302

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
           G C L  ++ A  L  DM   G+ PN   YT ++   C+ G   +AL + ++M+  ++  
Sbjct: 303 GYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVIL 362

Query: 697 DYCTHSALLLKQLDKDYKVHAVEYLESL 724
           D   ++ +L    +K   V A  + + +
Sbjct: 363 DEAVYTTVLSGFCNKGDLVSARRWFDEM 390


>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 892

 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 156/535 (29%), Positives = 286/535 (53%), Gaps = 4/535 (0%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           + D+L+ ++   SM+E    VF +   +G+  ++ +CN ++K L ++      R ++ ++
Sbjct: 138 VFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEVL 197

Query: 235 GEFGIKPSIVTYNTMLDSFCK----EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
            +FG +P+I TY  M++ FC+      +++ A E+L ++   G +PN VTY   I G  +
Sbjct: 198 IKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLCK 257

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
            G    A  LI+++ +    ++ H +N +I G  + G+L EA  + +EM   G+ P + +
Sbjct: 258 VGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYS 317

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           Y+ILI G C+ GRV  A   F EM    ++P+I SY+ L+ G+C+ G + +A  +F+E++
Sbjct: 318 YSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMK 377

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
           +  ++P V +Y+ LIDG CR GD++ A +  E M +    P    Y  ++ G  K    +
Sbjct: 378 NSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFA 437

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            A + F  M + G+ PD  A    ++   +  D ++A  L E+    G   +  +YN  +
Sbjct: 438 NALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFI 497

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
           H +C+    E+A +LL  M+    +PD + Y+++I    +  +  +   LF  M + G++
Sbjct: 498 HRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGIT 557

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
             + TYT+LI+   +  ++++A+  F  M+   + P+ I Y +L+ G C    + +A  L
Sbjct: 558 FNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARAL 617

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           F +M  EG  PN  TYT  INE        +A +LY++M +R + PD   ++ L+
Sbjct: 618 FDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLI 672



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 138/449 (30%), Positives = 225/449 (50%), Gaps = 1/449 (0%)

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
           N +I  L   G   +A EV++ M   GI P + +Y+ ++D FC++G + +A E+  EM+ 
Sbjct: 284 NAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRN 343

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
            G  PN  +Y++LI GF + G +++A  +  +M   G+    +SY+ +I G+  KG +  
Sbjct: 344 SGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDS 403

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
           A+   EEM +   +P+   Y  LI G  K  + ++A   F  M +  + PD I+ N +L 
Sbjct: 404 AIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILS 463

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
            YCR  +  +A  L ++ +   +     +YN  I  +CR    E A QL   M+ + +LP
Sbjct: 464 IYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLP 523

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           DV+ Y+ +++   K  N   A   F +M + G+  +   YT  I   +       AYRL 
Sbjct: 524 DVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLF 583

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
           + M      PD I Y  LV G C  G +  A  L  +M  +G  P+ +TYT  I+  L++
Sbjct: 584 KGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKL 643

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG-IRPNVIT 630
               +   L+  M  +G+ P  + YT+LI A    G +  A   F EM+ +G   PNV+ 
Sbjct: 644 NKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVM 703

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           Y  LIN   +L + DQA  L+ +M  +G+
Sbjct: 704 YTCLINSYIKLNKRDQAEKLYEEMRAKGL 732



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 127/415 (30%), Positives = 213/415 (51%), Gaps = 1/415 (0%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
            +L+  + +K  V+Q   VF +M  +G+LP++ + + +I      G   KA EV+  M  
Sbjct: 319 SILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKN 378

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            GI P + +Y+ ++D FC++G+M  A++   EM     SP+   Y  LI G+ ++ +   
Sbjct: 379 SGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFAN 438

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A    R M KLG+     + N I+  Y  K    +AL L E+    GV     +YN  I+
Sbjct: 439 ALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIH 498

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
            +C+      A      ML++NV+PD+++Y+TL+  + +  N  +A +LF ++    +  
Sbjct: 499 RICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITF 558

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
            V TY  LI+       ++VA +L + M    + PD I YT +V G C  G ++ AR  F
Sbjct: 559 NVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALF 618

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           +EM R+G  P+   YT  I   LKL   ++A++L E+M  +G  PD I Y +L+   C  
Sbjct: 619 DEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNT 678

Query: 537 GSLEEANELLRKMVGDG-FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
           G +  A  L  +M  +G   P+ + YT +I++ +++    +   L+  M  KGLS
Sbjct: 679 GEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGLS 733



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 82/175 (46%), Gaps = 1/175 (0%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           ++K   +L+ ++     ++    +F  M  + + PD      ++    + G   +AR ++
Sbjct: 559 NVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALF 618

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M   G  P++VTY   ++ + K  +  +A +L  +M+ RG  P+ + Y +LI  F   
Sbjct: 619 DEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNT 678

Query: 292 GELEQARGLIRDMLKLG-LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
           GE+ +A  L  +M + G    +   Y  +I  Y +     +A  L EEM  +G++
Sbjct: 679 GEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGLS 733


>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Cucumis sativus]
          Length = 830

 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 185/637 (29%), Positives = 308/637 (48%), Gaps = 14/637 (2%)

Query: 74  CNNRWVSDHFQAVVSDPELLVRVLNRIRE-KPRIALRFFRWVETQPGVKRDEFVFCTILE 132
           CN R V       V D      VL+R+R  KP +A+ FF ++  + G +   F    +  
Sbjct: 71  CNFRTVVSTLSETVVDG-----VLDRLRTLKPDVAVAFFYFLINEYGFRHSIFSQFVVSH 125

Query: 133 ILIESGLLRSAYWVVETVVCVNMHG----ILDVLIGGGLSSCVSIKILDLLLLIYTKKSM 188
           IL   G  +    V++ ++     G    I D+L+    +   +  + D+L   Y++  M
Sbjct: 126 ILAGKGRFKELDSVIKNLIVDQGLGSASIICDLLLEKFRNWDSNGLVWDMLAFAYSRHEM 185

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +   L V  KM        V   N ++  +R         +VY  +   G   S  T + 
Sbjct: 186 IHDALFVIAKMKDLNFQASVPTYNSLLHNMRHTDI---MWDVYNEIKVSGAPQSECTTSI 242

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++   C++ ++++A+  L +   +   P+ V+ N +++ F + G ++ AR     M+K G
Sbjct: 243 LIHGLCEQSKLEDAISFLHD-SNKVVGPSIVSINTIMSKFCKVGLIDVARSFFCLMVKNG 301

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           L   + SYN ++ G    G + EAL   ++M   GV P + TYN L  G    G +S AR
Sbjct: 302 LLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGAR 361

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               +ML + + PD+++Y TL+ G+C+ GNI EA  L  E  SR     V+ YN L+  L
Sbjct: 362 KVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCL 421

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G +E A  L + M    + PD I Y+I+++G CK G +  A + + +M  K   P  
Sbjct: 422 CKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHH 481

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
           FA    + G  K G+ SEA    +         D++ YN+++ G  +L  + EA +L  K
Sbjct: 482 FAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYK 541

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M+  G  P  +T+ ++I+     GDL   R +   +  KGL P++VTYT L++A+   G 
Sbjct: 542 MIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGN 601

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           ++  F +  EM+   + P  +TY  LI GLCR  ++ ++  L   M  +G+LP+  TY  
Sbjct: 602 MQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNT 661

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +I   C      +AL+LY  ML    +P   T+  L+
Sbjct: 662 IIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLI 698



 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 169/526 (32%), Positives = 265/526 (50%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           SI  ++ ++  + K  +++     F  M++NGLL D  + N ++  L   G   +A    
Sbjct: 270 SIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFT 329

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M + G++P +VTYNT+   F   G M  A +++ +M  +G +P+ VTY  LI G  + 
Sbjct: 330 DDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQM 389

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G +E+A  L ++ L  G K++   YN ++    + G + EAL L +EM T  + P    Y
Sbjct: 390 GNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVY 449

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           +ILI+GLCK G V  A   + +M  K   P   +   +L G  ++GNI EA   FD    
Sbjct: 450 SILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTR 509

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
            +L+  VV YN +IDG  R   +  A QL   MI +GI P V+T+  ++NG C+ G+L  
Sbjct: 510 MDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLME 569

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           AR+    +  KGL P    YTT +    ++G+  E +    EM A    P  +TY VL+ 
Sbjct: 570 ARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIK 629

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           GLC+   + E+ +LL  M   G +PD +TY +II    +  ++ +   L+N ML     P
Sbjct: 630 GLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDP 689

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
           T VTY VLI+A    G L+        ++ + I    +TY  +I   C   ++ +A G F
Sbjct: 690 TQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYF 749

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
             M  +G + +   Y+ +IN  C  G   EA   +  ML   + PD
Sbjct: 750 NQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPD 795



 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 141/487 (28%), Positives = 241/487 (49%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P + + N I+      G    AR  + +M + G+     +YN +L   C  G M EAL  
Sbjct: 269 PSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGF 328

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
             +M+  G  P+ VTYN L  GF   G +  AR +++ ML  GL     +Y  +ICG+ +
Sbjct: 329 TDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQ 388

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
            G + EAL L +E ++RG    +  YN+L+  LCK GR+ +A   F EM    + PD I 
Sbjct: 389 MGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIV 448

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           Y+ L++G C+ G +  A+ L++++R +   P       ++ GL + G++  A+   +   
Sbjct: 449 YSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWT 508

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
              ++ DV+ Y IM++G  ++  ++ A + + +M+ +G+ P    + T I G  + GD  
Sbjct: 509 RMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLM 568

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           EA ++ E +  KG  P ++TY  L++  C++G+++E    L +M  +  +P H+TYT +I
Sbjct: 569 EARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLI 628

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
                   +     L   M  KGL P  VTY  +I        +  A   ++ M +    
Sbjct: 629 KGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCD 688

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           P  +TY  LIN LC    +     + + +E+  I   K TY  +I  +C  G   +AL  
Sbjct: 689 PTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGY 748

Query: 686 YKEMLDR 692
           + +ML +
Sbjct: 749 FNQMLAK 755



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/371 (29%), Positives = 184/371 (49%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K+  V++   ++ +M      P       ++  L  NG   +AR  +       +   +V
Sbjct: 458 KEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVV 517

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
            YN M+D + +   + EA++L ++M  RG +P+ VT+N LI GF R G+L +AR ++  +
Sbjct: 518 LYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVI 577

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
              GL  S  +Y  ++  Y E G + E  +   EM    V PT  TY +LI GLC+  ++
Sbjct: 578 RLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKM 637

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            ++      M  K ++PD ++YNT++  +C+   I +A  L++ +   N  PT VTY  L
Sbjct: 638 HESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVL 697

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           I+ LC +GDL+   ++  ++ ++ I    +TY  ++   C  G +S A  +FN+ML KG 
Sbjct: 698 INALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGF 757

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
                 Y+  I    K G  +EA      ML++G  PD      +++   + G+     E
Sbjct: 758 VISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFE 817

Query: 545 LLRKMVGDGFI 555
            L  +V  GFI
Sbjct: 818 FLAMVVKSGFI 828



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 170/342 (49%), Gaps = 8/342 (2%)

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL--EVAQQLKEN 443
           ++ L + Y R   I +A  +  +++  N   +V TYN+L+  + R+ D+  +V  ++K +
Sbjct: 173 WDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNM-RHTDIMWDVYNEIKVS 231

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
               G      T +I+++G C+   L  A  F ++   K + P   +  T ++   K+G 
Sbjct: 232 ----GAPQSECTTSILIHGLCEQSKLEDAISFLHDS-NKVVGPSIVSINTIMSKFCKVGL 286

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
              A      M+  G   D  +YN+L+HGLC  GS++EA      M   G  PD +TY +
Sbjct: 287 IDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNT 346

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           +    L +G +   R +   ML +GL+P LVTYT LI  H   G +E A     E   +G
Sbjct: 347 LAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRG 406

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
            + NVI YN L++ LC++ RI++A  LF +ME   + P+   Y+ILI+  C  G  Q A 
Sbjct: 407 FKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAY 466

Query: 684 RLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
           +LY++M  +   P +    A+LL          A  Y ++ T
Sbjct: 467 QLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWT 508


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 157/508 (30%), Positives = 271/508 (53%), Gaps = 2/508 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVL--RDNGFSVKAREVYRMMGEFGIKPSIVTY 246
           V+  +  FN +LR      +   N+I+  L   +N     A  + R +   GI P I T+
Sbjct: 47  VDNVVSSFNHLLRTKPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTF 106

Query: 247 NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
           N +++ +C   EM  A  ++ ++   G  P+ +T+N LI G   NG++++A      +L 
Sbjct: 107 NILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLA 166

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
           LG  +   SY  +I G  + G    AL +  ++  + V   +  YN +I  LCK   V D
Sbjct: 167 LGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVID 226

Query: 367 ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
           A   + +M+ K + PD+++++ L+YG+C  G + EAF LF E+  +N+ P   T+N L+D
Sbjct: 227 AYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVD 286

Query: 427 GLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
            LC+ G+L+ A+ +   M+ +G++P+V+TY+ +++G C +  ++ A+   N + + G  P
Sbjct: 287 ALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAP 346

Query: 487 DRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
           +  +Y T I G  K+    EA  L  +M  KG  PD +TYN L+ GLCK G +  A EL+
Sbjct: 347 NAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELV 406

Query: 547 RKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAAR 606
            +M  +G   +  TY  +I A  +   + +   L   +  +G+ P + T+ +LI+     
Sbjct: 407 DEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKV 466

Query: 607 GRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
           GRL+ A   F ++  KG   N  TYN ++NGLC+    D+A  L   M++ GI+P+  TY
Sbjct: 467 GRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTY 526

Query: 667 TILINENCNAGNWQEALRLYKEMLDREI 694
             LI    +    ++A +L +EM+ R++
Sbjct: 527 ETLIQALFHKDENEKAEKLLREMIARDV 554



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 139/477 (29%), Positives = 241/477 (50%), Gaps = 4/477 (0%)

Query: 240 KP--SIVTYNTMLDSFCKEGEMQ--EALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
           KP  SI+ +N +L S  K        A+ L   ++  G +P+  T+N+LI  +    E+ 
Sbjct: 61  KPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMN 120

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
            A  ++  +LK+G +    ++N +I G    G + EAL+  + ++  G      +Y  LI
Sbjct: 121 FAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLI 180

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
            GLCK G    A     ++  K V  +++ YNT++   C+   + +A+ L+ ++ ++ + 
Sbjct: 181 NGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKIS 240

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P VVT++ LI G C  G LE A  L   M+ + I PD  T+ I+V+  CK GNL  A+  
Sbjct: 241 PDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNM 300

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
              M+++G+ P+   Y++ + G   +   ++A  +   +   G  P+  +Y  +++G CK
Sbjct: 301 LVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCK 360

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
           +  ++EA  L   M   G  PD +TY S+I    + G +    +L + M   G    + T
Sbjct: 361 IKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFT 420

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           Y  LI A      ++ A     +++ +GI+P++ T+N LI GLC++ R+  A  +F D+ 
Sbjct: 421 YNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLL 480

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
            +G   N +TY I++N  C  G + EA  L  +M D  I PD  T+  L+     KD
Sbjct: 481 SKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKD 537



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 126/413 (30%), Positives = 225/413 (54%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V++ L   + +L  G   D  +   +I  L   G +  A ++ R +    +K ++V YNT
Sbjct: 154 VKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNT 213

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++DS CK   + +A EL  +M  +  SP+ VT++ LI GF   G+LE+A GL R+M+   
Sbjct: 214 IIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKN 273

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           +    +++N ++    ++G L  A N+   M+  GV P + TY+ L+ G C   +V+ A+
Sbjct: 274 INPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAK 333

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
           H    + +    P+  SY T++ G+C+   + EA  LF++++ + + P  VTYN+LIDGL
Sbjct: 334 HVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGL 393

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G +  A +L + M + G   ++ TY  +++  CK  ++  A     ++  +G+QPD 
Sbjct: 394 CKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDM 453

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
           + +   I G  K+G    A  + +++L+KG+  +  TYN++V+GLCK G  +EA  LL K
Sbjct: 454 YTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSK 513

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           M  +G IPD +TY ++I A     +  +   L   M+ + +   L    +++H
Sbjct: 514 MDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDVVYALEGLEMVLH 566



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 212/415 (51%), Gaps = 15/415 (3%)

Query: 103 KPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVL 162
           K + AL F   V    G   D+F + T++  L + G  R+A  ++               
Sbjct: 153 KVKEALHFHDHV-LALGFHLDQFSYGTLINGLCKIGETRTALQMLRK------------- 198

Query: 163 IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG 222
           I G L   +++ + + ++    K  +V     ++++M+   + PDV   + +I      G
Sbjct: 199 IDGKLVK-INVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVG 257

Query: 223 FSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYN 282
              +A  ++R M    I P   T+N ++D+ CKEG ++ A  +L  M   G  PN VTY+
Sbjct: 258 QLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYS 317

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
            L+ G+    ++ +A+ ++  + ++G   +AHSY  +I G+ +  ++ EAL+L  +M  +
Sbjct: 318 SLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFK 377

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           G+AP   TYN LI GLCK GR+S A     EM       +I +YN L+   C++ ++ +A
Sbjct: 378 GIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQA 437

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
             L  +++ + + P + T+N LI GLC+ G L+ AQ + ++++++G   +  TY IMVNG
Sbjct: 438 IALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNG 497

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
            CK G    A    ++M   G+ PD   Y T I       +  +A +L  EM+A+
Sbjct: 498 LCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIAR 552



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 104/198 (52%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K  MV++ L +FN M   G+ PD    N +I  L  +G    A E+   M + G   +
Sbjct: 358 FCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPAN 417

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           I TYN ++D+ CK   + +A+ L+ +++ +G  P+  T+N+LI G  + G L+ A+ + +
Sbjct: 418 IFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQ 477

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           D+L  G  V+A +YN ++ G  ++GL  EA  L  +M   G+ P   TY  LI  L    
Sbjct: 478 DLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKD 537

Query: 363 RVSDARHRFFEMLRKNVI 380
               A     EM+ ++V+
Sbjct: 538 ENEKAEKLLREMIARDVV 555


>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera]
 gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 173/551 (31%), Positives = 283/551 (51%), Gaps = 33/551 (5%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           ++  V+    ++  M+  G+ P+    N +I  L D+G    AREV+  MG  G +P+  
Sbjct: 128 REDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEF 187

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           ++  ++  +C+ G    ALELL  M   G  PN V YN LI+ F R G  E+A  L+  M
Sbjct: 188 SFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERM 247

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEA------LNLEEEMVTRGVA-PTLATYNILIYG 357
            + GL     ++N  I      G ++EA      + ++EE+   G+  P + T+N+++ G
Sbjct: 248 REDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEEL---GLPRPNITTFNLMLEG 304

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
            CK G + +A+     M R   + ++ SYN  L G  R+G + EA L   E+  + + P 
Sbjct: 305 FCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPN 364

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           + ++NT++DGLC+ G +  A+ +   MI+ GI PD +TY+ +++G C  G +  A    +
Sbjct: 365 IYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILH 424

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           EM+R+G  P+ +     +    K G   EA +L ++M  + +  D +T N+++ GLCK G
Sbjct: 425 EMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSG 484

Query: 538 SLEEANELLRKM----------VGDGFI-------------PDHITYTSIIHASLEMGDL 574
            L+EA E++  M          +G+ FI             PD ITY+ II+   + G L
Sbjct: 485 KLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRL 544

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
              R  F  M+ K L P  + Y   IH+    G++  AF    +M+ +G   ++ TYN+L
Sbjct: 545 DEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSL 604

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           I GL    +I + YGL  DM+E+GI PN  TY  +I+  C  G  ++A  L  EML + I
Sbjct: 605 ILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGI 664

Query: 695 EPDYCTHSALL 705
            P+  +   L+
Sbjct: 665 SPNISSFRLLI 675



 Score =  258 bits (660), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 170/557 (30%), Positives = 281/557 (50%), Gaps = 33/557 (5%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
           L+LL+         E    VF+KM   G  P+  +   +++     G S++A E+   MG
Sbjct: 154 LNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMG 213

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
            FG++P+ V YNT++ SFC+EG  +EA  L+  M+  G  P+ VT+N  I+     G++ 
Sbjct: 214 SFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKIL 273

Query: 296 QARGLIRDML---KLGL-KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           +A  + RDM    +LGL + +  ++N ++ G+ ++G+L EA  L E M   G    L +Y
Sbjct: 274 EASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESY 333

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           NI + GL + G++ +A+    EM+ K + P+I S+NT++ G C++G I +A ++   + S
Sbjct: 334 NIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMIS 393

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
             + P  VTY+TL+ G C  G +  A  +   M+ +G  P+  T  I+++   K G +  
Sbjct: 394 SGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFE 453

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP----------- 520
           A +   +M  +    D       I G  K G   EA  + E M   G             
Sbjct: 454 AEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIG 513

Query: 521 ------------PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
                       PDLITY+++++GLCK G L+EA +   +MVG    PD I Y + IH+ 
Sbjct: 514 LVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSF 573

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
            + G +     +  +M ++G + +L TY  LI    ++ ++   +    +M+ KGI PN+
Sbjct: 574 CKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNI 633

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
            TYN +I+ LC   RI  A  L  +M ++GI PN  ++ +LI   C A ++     + KE
Sbjct: 634 CTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFG----VVKE 689

Query: 689 MLDREIEPDYCTHSALL 705
           +   EI    C H   L
Sbjct: 690 VF--EIALSICGHKEAL 704



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 143/493 (29%), Positives = 241/493 (48%), Gaps = 27/493 (5%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P +  YN +L+S  +E ++     L  +M   G SP   T N+LI G   +G  E AR +
Sbjct: 114 PPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREV 173

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
              M   G + +  S+  ++ GY   GL + AL L + M + GV P    YN LI   C+
Sbjct: 174 FDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCR 233

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV----P 416
            GR  +A      M    + PD++++N+ +   C +G I EA  +F +++    +    P
Sbjct: 234 EGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRP 293

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
            + T+N +++G C+ G LE A+ L E+M   G L ++ +Y I + G  + G L  A+   
Sbjct: 294 NITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLAL 353

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
            EM+ KG++P+ +++ T + G  K G  S+A  +   M++ G  PD +TY+ L+HG C  
Sbjct: 354 KEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCST 413

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G + +AN +L +M+  G  P+  T   ++H+  + G +     L   M  +      VT 
Sbjct: 414 GKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTC 473

Query: 597 TVL---------------------IHAHAARGRLELAFMYFSEMQVKGIR--PNVITYNA 633
            ++                     IH  AA G L  +F+   +    G +  P++ITY+ 
Sbjct: 474 NIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSI 533

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
           +INGLC+  R+D+A   FI+M  + + P+   Y   I+  C  G    A R+ K+M  R 
Sbjct: 534 IINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRG 593

Query: 694 IEPDYCTHSALLL 706
                 T+++L+L
Sbjct: 594 CNKSLQTYNSLIL 606



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 149/539 (27%), Positives = 246/539 (45%), Gaps = 74/539 (13%)

Query: 107 ALRFFR--WVETQPGVKRDEFV-FCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLI 163
           A R FR   ++ + G+ R     F  +LE   + G+L  A  +VE++     +G L    
Sbjct: 275 ASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESM---KRNGNL---- 327

Query: 164 GGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGF 223
                  + ++  ++ LL   +   + +  L   +M+  G+ P++ + N ++  L  NG 
Sbjct: 328 -------MELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGL 380

Query: 224 SVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNV 283
              AR +  +M   GI P  VTY+T+L   C  G++ +A  +L EM  RGCSPN  T N+
Sbjct: 381 ISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNI 440

Query: 284 LITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG 343
           L+    + G + +A  L++ M +    +   + N +I G  + G L EA+ + E M   G
Sbjct: 441 LLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHG 500

Query: 344 VA-----------------------PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
            A                       P L TY+I+I GLCK GR+ +AR +F EM+ K++ 
Sbjct: 501 SAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLH 560

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           PD I Y+T ++ +C+ G I  AF +  ++  R    ++ TYN+LI GL     +     L
Sbjct: 561 PDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGL 620

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP-------------- 486
            ++M  +GI P++ TY  M++  C+ G +  A    +EML+KG+ P              
Sbjct: 621 LDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCK 680

Query: 487 --------DRFAYTTQIAGE------------LKLGDTSEAYRLQEEMLAKGFPPDLITY 526
                   + F     I G             L  G+ SEA  L +  L + F      Y
Sbjct: 681 ASDFGVVKEVFEIALSICGHKEALYSLMFNELLIGGEVSEAKELFDAALDRCFDLGNFQY 740

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           N L+  LCK   LE A+++L KM+  G+  D  ++  +I    + G      +L   M+
Sbjct: 741 NDLIEKLCKDEMLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDADELAERMM 799



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 168/379 (44%), Gaps = 42/379 (11%)

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV--PTVVTYNTLIDGLCRYGDLEVAQQLK 441
           +S   L+    +SG    AF  F   RS+     P V  YN +++   R   ++    L 
Sbjct: 80  VSLIALIRILAKSGLSDLAFSQFQSFRSQVPANPPPVYLYNMVLESSLREDKVDSFSWLY 139

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
           ++M+  G+ P+  T  +++ G C  G    ARE F++M  KG +P+ F++   + G  + 
Sbjct: 140 KDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRA 199

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
           G +  A  L + M + G  P+ + YN L+   C+ G  EEA  L+ +M  DG  PD +T+
Sbjct: 200 GLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTF 259

Query: 562 TSIIHASLEMGDLRRGRDLFNNML---RKGLS-PTLVTYTVLIHAHAARGRLELAF---- 613
            S I A    G +     +F +M      GL  P + T+ +++      G LE A     
Sbjct: 260 NSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVE 319

Query: 614 -------------------------------MYFSEMQVKGIRPNVITYNALINGLCRLR 642
                                          +   EM  KGI PN+ ++N +++GLC+  
Sbjct: 320 SMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNG 379

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
            I  A  +   M   GI P+  TY+ L++  C+ G   +A  +  EM+ R   P+  T +
Sbjct: 380 LISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCN 439

Query: 703 ALLLKQLDKDYKVHAVEYL 721
            +LL  L K+ ++   E L
Sbjct: 440 -ILLHSLWKEGRIFEAEKL 457



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 147/293 (50%), Gaps = 10/293 (3%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P ++TY+ +++  CK G + EA +   EM G+   P+ + Y+  I  F ++G++  A  +
Sbjct: 526 PDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRV 585

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           ++DM K G   S  +YN +I G   K  + E   L ++M  +G+ P + TYN +I  LC+
Sbjct: 586 LKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCE 645

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG---EAFLLFDELRSRNLVPT 417
            GR+ DA     EML+K + P+I S+  L+  +C++ + G   E F +   +        
Sbjct: 646 GGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEIALSICGHKEALY 705

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
            + +N L+ G    G++  A++L +  +++        Y  ++   CK   L  A +  +
Sbjct: 706 SLMFNELLIG----GEVSEAKELFDAALDRCFDLGNFQYNDLIEKLCKDEMLENASDILH 761

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML---AKGFPPDLITYN 527
           +M+ KG + D  ++   I G  K G   +A  L E M+   ++G   + IT N
Sbjct: 762 KMIDKGYRFDPASFMPVIDGLGKRGKKHDADELAERMMDMASEGMVENKITRN 814



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 2/133 (1%)

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEM--QVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
           V+   LI   A  G  +LAF  F     QV    P V  YN ++    R  ++D    L+
Sbjct: 80  VSLIALIRILAKSGLSDLAFSQFQSFRSQVPANPPPVYLYNMVLESSLREDKVDSFSWLY 139

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDK 711
            DM   G+ P  YT  +LI   C++G +++A  ++ +M  +   P+  +   L+      
Sbjct: 140 KDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRA 199

Query: 712 DYKVHAVEYLESL 724
              + A+E L+ +
Sbjct: 200 GLSMRALELLDGM 212


>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 864

 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 185/638 (28%), Positives = 317/638 (49%), Gaps = 35/638 (5%)

Query: 90  PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVET 149
           P +  +V++  R    I +RFF WV        D      +L++++ SGL R A+ V+  
Sbjct: 69  PNVASQVISLQRSDNDICVRFFMWVCKHSSYCFDPTQKNQLLKLIVSSGLFRVAHDVIVA 128

Query: 150 VV--CVNMHGILDVLIG--------GGL--------SSCVSIKILDLLLLIYTKKSMVEQ 191
           ++  C      +  LI          G         S  +S+  LDL  L Y        
Sbjct: 129 LIRECSRCEKEMLKLISCFDELREVSGFRLNYPCYSSLLMSLAKLDLGFLAY-------- 180

Query: 192 CLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR---MMGEFGIKPSIVTYNT 248
             + + +M  +G +  + +   I+  L  NG++ +A E++    +   F +   IVT  +
Sbjct: 181 --VTYRRMEADGFVVGMIDYRTIVNALCKNGYT-EAAEMFMCKILKVGFLLDSHIVT--S 235

Query: 249 MLDSFCKEGEMQEALELLWEMQGRG-CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
           +L  FC+   +++AL++   M   G C+PN V+Y++LI G    G LE+A GL   M + 
Sbjct: 236 LLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEK 295

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           G + S  +Y  +I    ++GL+ +A NL +EM+ RG  P + TY +LI GLC+ G++ +A
Sbjct: 296 GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEA 355

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
                +M++  + P +I+YN L+ GYC+ G +  AF L   +  R   P V T+N L++G
Sbjct: 356 NGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEG 415

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           LCR G    A  L + M++ G+ PD+++Y ++++G C+ G++++A +    M    L+PD
Sbjct: 416 LCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPD 475

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              +T  I    K G    A      ML KG   D +T   L+ G+C +G   +A  +L 
Sbjct: 476 CLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILE 535

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
            +V    +    +   I+    +   L+    +   + + GL P++VTYT L+      G
Sbjct: 536 TLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSG 595

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
            +  +F     M++ G  PNV  Y  +INGLC+  R+++A  L   M++ G+ PN  TYT
Sbjct: 596 DISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYT 655

Query: 668 ILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +++    N G    AL   + M++R  E +   +S+LL
Sbjct: 656 VMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLL 693



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 149/567 (26%), Positives = 261/567 (46%), Gaps = 46/567 (8%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLL-PDVKNCNRIIKVLRDNGFSVKAREVYRM 233
           I+  LLL + +   +   L VF+ M R G   P+  + + +I  L + G   +A  +   
Sbjct: 232 IVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQ 291

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           MGE G +PS  TY  ++ + C  G + +A  L  EM  RGC PN  TY VLI G  R+G+
Sbjct: 292 MGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGK 351

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLV----------------------- 330
           +E+A G+ R M+K G+  S  +YN +I GY + G +V                       
Sbjct: 352 IEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNE 411

Query: 331 ------------EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
                       +A++L + M+  G++P + +YN+LI GLC+ G ++ A      M   +
Sbjct: 412 LMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFD 471

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
           + PD +++  ++  +C+ G    A      +  + +    VT  TLIDG+C  G    A 
Sbjct: 472 LEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDAL 531

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
            + E ++   +L    +  ++++   K   L        ++ + GL P    YTT + G 
Sbjct: 532 FILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGL 591

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
           ++ GD S ++R+ E M   G  P++  Y ++++GLC+ G +EEA +LL  M   G  P+H
Sbjct: 592 IRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNH 651

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH--AARGRLELAFMYF 616
           +TYT ++   +  G L R  +    M+ +G       Y+ L+     + +G  E      
Sbjct: 652 VTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECI 711

Query: 617 SEM-----QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
            E+     Q+ G    +  +  L+  LC+  R D++ GL   + + G+   K    I++ 
Sbjct: 712 KELISVVEQLGGSTSGLCIF--LVTRLCKEGRTDESNGLVQTILKSGVFLEK-AIDIIME 768

Query: 672 ENCNAGNWQEALRLYKEMLDREIEPDY 698
             C+     + + L   +L     P +
Sbjct: 769 SYCSKKKHTKCVELITLVLKSGFVPSF 795



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 145/590 (24%), Positives = 237/590 (40%), Gaps = 123/590 (20%)

Query: 105 RIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIG 164
           R AL+ F  +  +     +   +  ++  L E G L  A+            G+ D +  
Sbjct: 247 RDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAF------------GLKDQMGE 294

Query: 165 GGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS 224
            G     S +   +L+     + ++++   +F++M+  G  P+V     +I  L  +G  
Sbjct: 295 KGCQP--STRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKI 352

Query: 225 VKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVL 284
            +A  V R M + GI PS++TYN +++ +CK+G +  A ELL  M+ R C PN  T+N L
Sbjct: 353 EEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNEL 412

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           + G  R G+  +A  L++ ML  GL     SYN +I G   +G +  A  L   M +  +
Sbjct: 413 MEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDL 472

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
            P   T+  +I   CK G+   A      MLRK +  D ++  TL+ G C  G   +A  
Sbjct: 473 EPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALF 532

Query: 405 LFDEL-----------------------------------RSRNLVPTVVTYNTLIDGLC 429
           + + L                                       LVP+VVTY TL+DGL 
Sbjct: 533 ILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLI 592

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
           R GD+  + ++ E M   G LP+V  YTI++NG C+ G +  A +  + M   G+ P+  
Sbjct: 593 RSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHV 652

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG----------------- 532
            YT  + G +  G    A      M+ +G+  +   Y+ L+ G                 
Sbjct: 653 TYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECIK 712

Query: 533 -----------------------LCKLGSLEEAN-------------------------- 543
                                  LCK G  +E+N                          
Sbjct: 713 ELISVVEQLGGSTSGLCIFLVTRLCKEGRTDESNGLVQTILKSGVFLEKAIDIIMESYCS 772

Query: 544 --------ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
                   EL+  ++  GF+P   ++  +I    + GD  R R+L   +L
Sbjct: 773 KKKHTKCVELITLVLKSGFVPSFKSFCLVIQGLKKEGDTERARELVMELL 822


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  280 bits (715), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 154/540 (28%), Positives = 281/540 (52%), Gaps = 8/540 (1%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV---- 244
           ++  + +F  M+++  LP +   N+++  +      +K  +V   +GE   +  IV    
Sbjct: 28  LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIA----KMKKFDVVISLGEKMQRLEIVHGLY 83

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TYN +++ FC+  ++  AL LL +M   G  P+ VT + L+ G+     +  A  L+  M
Sbjct: 84  TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 143

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           +++G +    ++  +I G        EA+ L + MV RG  P L TY +++ GLCK G  
Sbjct: 144 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 203

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
             A +   +M    +  D++ +NT++   C+  ++ +A  LF E+ ++ + P VVTY++L
Sbjct: 204 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 263

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           I  LC YG    A QL  +MI + I P+++T+  +++   K G    A + +++M+++ +
Sbjct: 264 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 323

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            PD F Y + + G        +A ++ E M++K   PD++TYN L+ G CK   +E+  E
Sbjct: 324 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 383

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           L R+M   G + D +TYT++I      GD    + +F  M+  G+ P ++TY++L+    
Sbjct: 384 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 443

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
             G+LE A   F  MQ   I+ ++  Y  +I G+C+  ++D  + LF  +  +G+ PN  
Sbjct: 444 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 503

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           TY  +I+  C+    QEA  L K+M +    P+  T++ L+   L    K  + E +  +
Sbjct: 504 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 563



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 127/435 (29%), Positives = 220/435 (50%)

Query: 271 GRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLV 330
           GR  S     Y  ++     + +L+ A GL   M+K     S   +N ++   ++     
Sbjct: 5   GRAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFD 64

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
             ++L E+M    +   L TYNILI   C+  ++S A     +M++    P I++ ++LL
Sbjct: 65  VVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 124

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
            GYC    I +A  L D++      P  +T+ TLI GL  +     A  L + M+ +G  
Sbjct: 125 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 184

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
           P+++TY ++VNG CK G+  +A    N+M    ++ D   + T I    K     +A  L
Sbjct: 185 PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNL 244

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
            +EM  KG  P+++TY+ L+  LC  G   +A++LL  M+     P+ +T+ ++I A ++
Sbjct: 245 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 304

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
            G       L+++M+++ + P + TY  L++      RL+ A   F  M  K   P+V+T
Sbjct: 305 EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT 364

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           YN LI G C+ +R++    LF +M   G++ +  TYT LI    + G+   A +++K+M+
Sbjct: 365 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 424

Query: 691 DREIEPDYCTHSALL 705
              + PD  T+S LL
Sbjct: 425 SDGVPPDIMTYSILL 439



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 145/516 (28%), Positives = 245/516 (47%), Gaps = 87/516 (16%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR-----EVY 231
           ++L+  + ++S +   L +  KM++ G  P +   + ++     NG+    R      + 
Sbjct: 86  NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL-----NGYCHGKRISDAVALV 140

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M E G +P  +T+ T++       +  EA+ L+  M  RGC PN VTY V++ G  + 
Sbjct: 141 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 200

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G+ + A  L+  M    ++     +N II    +   + +ALNL +EM T+G+ P + TY
Sbjct: 201 GDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 260

Query: 352 NILIYGLCKWGRVSDARH----------------------------RFFE-------MLR 376
           + LI  LC +GR SDA                              +F E       M++
Sbjct: 261 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 320

Query: 377 KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY----- 431
           +++ PDI +YN+L+ G+C    + +A  +F+ + S++  P VVTYNTLI G C+      
Sbjct: 321 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 380

Query: 432 ------------------------------GDLEVAQQLKENMINQGILPDVITYTIMVN 461
                                         GD + AQ++ + M++ G+ PD++TY+I+++
Sbjct: 381 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 440

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
           G C  G L  A E F+ M +  ++ D + YTT I G  K G   + + L   +  KG  P
Sbjct: 441 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 500

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           +++TYN ++ GLC    L+EA  LL+KM  DG +P+  TY ++I A L  GD     +L 
Sbjct: 501 NVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELI 560

Query: 582 NNMLR---KGLSPTLVTYTVLIHAHAARGRLELAFM 614
             M      G + T+     ++H     GRL+ +F+
Sbjct: 561 REMRSCRFVGDASTIGLVANMLH----DGRLDKSFL 592



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 130/460 (28%), Positives = 226/460 (49%)

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           Y  +L +   + ++ +A+ L   M      P+ V +N L++  ++  + +    L   M 
Sbjct: 15  YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 74

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
           +L +    ++YN +I  +  +  +  AL L  +M+  G  P++ T + L+ G C   R+S
Sbjct: 75  RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 134

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
           DA     +M+     PD I++ TL++G        EA  L D +  R   P +VTY  ++
Sbjct: 135 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 194

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           +GLC+ GD ++A  L   M    I  DV+ +  +++  CK  ++  A   F EM  KG++
Sbjct: 195 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 254

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           P+   Y++ I+     G  S+A +L  +M+ K   P+L+T+N L+    K G   EA +L
Sbjct: 255 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 314

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
              M+     PD  TY S+++       L + + +F  M+ K   P +VTY  LI     
Sbjct: 315 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 374

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
             R+E     F EM  +G+  + +TY  LI GL      D A  +F  M  +G+ P+  T
Sbjct: 375 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 434

Query: 666 YTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           Y+IL++  CN G  ++AL ++  M   EI+ D   ++ ++
Sbjct: 435 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 474


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  280 bits (715), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 158/496 (31%), Positives = 258/496 (52%), Gaps = 2/496 (0%)

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
           N ++K L  NG   +A  + R MG   + P IV+YNT+++  CK  +++EA+ LL EM+ 
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
            GC PN VT   L+ G  ++G +++A  L+  M K G       Y  +I G+   G L  
Sbjct: 62  AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
              L +EM+ +G++  + TY+ L++GLC+ G+  +A      M    + PD+++Y  L+ 
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
           G C+ G    A  L + +  +   P+ VTYN L+ GLC+ G +  A ++   MI +G   
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 241

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEML--RKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
           DV+TY  ++ G C  G +  A + FN M      L+P+ F +   I G  K G  ++A +
Sbjct: 242 DVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVK 301

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           +  +M+ KG   +L+TYN+L+ G  K G ++EA EL ++++  GF+P+  TY+ +I    
Sbjct: 302 IHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFC 361

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
           +M  L   + LF  M   GL+P L  Y  L+ +    G LE A   F EM      P++I
Sbjct: 362 KMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDII 421

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           ++N +I+G  +         L + M E G+ P+  T++ LIN     G   EA    + M
Sbjct: 422 SFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERM 481

Query: 690 LDREIEPDYCTHSALL 705
           +     PD   + +LL
Sbjct: 482 VASGFTPDALVYDSLL 497



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 152/470 (32%), Positives = 238/470 (50%), Gaps = 3/470 (0%)

Query: 203 GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           G  P+   C  ++  L  +G   +A E+   M + G    +V Y T++  FC  G +   
Sbjct: 63  GCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRG 122

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
            EL  EM G+G S N VTY+ L+ G  R G+ ++A  ++  M + G+     +Y  +I G
Sbjct: 123 KELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDG 182

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
             + G    A++L   MV +G  P+  TYN+L+ GLCK G V DA      M+ K    D
Sbjct: 183 LCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKAD 242

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDEL--RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           +++YNTL+ G C  G + EA  LF+ +      L P V T+N LI GLC+ G L  A ++
Sbjct: 243 VVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKI 302

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
              M+ +G   +++TY +++ G  K G +  A E + ++L  G  P+ F Y+  I G  K
Sbjct: 303 HRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCK 362

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
           +   + A  L  EM   G  P L  YN L+  LCK GSLE+A  L ++M      PD I+
Sbjct: 363 MRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIIS 422

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           + ++I  +L+ GD +  ++L   M+  GL P  +T++ LI+  +  G L+ A      M 
Sbjct: 423 FNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMV 482

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG-ILPNKYTYTIL 669
             G  P+ + Y++L+ GL       +   L   M  +G +L  K   TIL
Sbjct: 483 ASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTIL 532



 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 145/428 (33%), Positives = 225/428 (52%), Gaps = 6/428 (1%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F++ML  G+  +V   + ++  L   G   +A  V   M E GI P +VTY  ++D  C
Sbjct: 125 LFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLC 184

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K+G    A++LL  M  +G  P+ VTYNVL++G  + G +  A  ++R M++ G K    
Sbjct: 185 KDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVV 244

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTR--GVAPTLATYNILIYGLCKWGRVSDARHRFF 372
           +YN ++ G  +KG + EAL L   M      + P + T+N+LI GLCK GR++ A     
Sbjct: 245 TYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHR 304

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
           +M++K    ++++YN LL G  ++G I EA  L+ ++     VP   TY+ LIDG C+  
Sbjct: 305 KMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMR 364

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
            L +A+ L   M   G+ P +  Y  ++   CK G+L  A+  F EM     +PD  ++ 
Sbjct: 365 MLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFN 424

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
           T I G LK GD      LQ +M+  G  PD +T++ L++ L KLG L+EA   L +MV  
Sbjct: 425 TMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVAS 484

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG--LSPTLVT--YTVLIHAHAARGR 608
           GF PD + Y S++      GD     +L + M  KG  L   +V+   T L H+      
Sbjct: 485 GFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDV 544

Query: 609 LELAFMYF 616
           +EL   +F
Sbjct: 545 MELLPTFF 552



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 141/267 (52%)

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
           I++ G C+ G +  A     EM RK + PD  +Y T I G  K     EA  L  EM A 
Sbjct: 3   IVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAA 62

Query: 518 GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
           G  P+ +T   L+ GLCK G ++EA ELL  M   GF  D + Y ++I      G+L RG
Sbjct: 63  GCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRG 122

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
           ++LF+ ML KG+S  +VTY+ L+H     G+ + A    + M   GI P+V+TY  LI+G
Sbjct: 123 KELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDG 182

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           LC+  R   A  L   M E+G  P+  TY +L++  C  G   +A ++ + M+++  + D
Sbjct: 183 LCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKAD 242

Query: 698 YCTHSALLLKQLDKDYKVHAVEYLESL 724
             T++ L+    DK     A++   S+
Sbjct: 243 VVTYNTLMKGLCDKGKVDEALKLFNSM 269



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 95/195 (48%)

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           N+++ GLC+ G + EA  L+R+M      PD ++Y ++I+   +   L+    L   M  
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
            G  P  VT T L+      GR++ A      M+ KG   +V+ Y  LI+G C    +D+
Sbjct: 62  AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
              LF +M  +GI  N  TY+ L++  C  G W+EA  +   M +  I PD  T++ L+ 
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181

Query: 707 KQLDKDYKVHAVEYL 721
                    HA++ L
Sbjct: 182 GLCKDGRATHAMDLL 196


>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Cucumis
           sativus]
          Length = 830

 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 185/637 (29%), Positives = 308/637 (48%), Gaps = 14/637 (2%)

Query: 74  CNNRWVSDHFQAVVSDPELLVRVLNRIRE-KPRIALRFFRWVETQPGVKRDEFVFCTILE 132
           CN R V       V D      VL+R+R  KP +A+ FF ++  + G +   F    +  
Sbjct: 71  CNFRTVVSTLSETVVDG-----VLDRLRTLKPDVAVAFFYFLINEYGFRHSIFSQFVVSH 125

Query: 133 ILIESGLLRSAYWVVETVVCVNMHG----ILDVLIGGGLSSCVSIKILDLLLLIYTKKSM 188
           IL   G  +    V++ ++     G    I D+L+    +   +  + D+L   Y++  M
Sbjct: 126 ILAGKGRFKELDSVIKNLIVDQGLGSASIICDLLLEKFRNWDSNGLVWDMLAFAYSRHEM 185

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +   L V  KM        V   N ++  +R         +VY  +   G   S  T + 
Sbjct: 186 IHDALFVIAKMKDLNFQASVPTYNSLLHNMRHTDI---MWDVYNEIKVSGAPQSECTTSI 242

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++   C++ ++++A+  L +   +   P+ V+ N +++ F + G ++ AR     M+K G
Sbjct: 243 LIHGLCEQSKLEDAISFLHD-SNKVVGPSIVSINTIMSKFCKVGLIDVARSXFCLMVKNG 301

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           L   + SYN ++ G    G + EAL   ++M   GV P + TYN L  G    G +S AR
Sbjct: 302 LLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGAR 361

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               +ML + + PD+++Y TL+ G+C+ GNI EA  L  E  SR     V+ YN L+  L
Sbjct: 362 KVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCL 421

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G +E A  L + M    + PD I Y+I+++G CK G +  A + + +M  K   P  
Sbjct: 422 CKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHH 481

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
           FA    + G  K G+ SEA    +         D++ YN+++ G  +L  + EA +L  K
Sbjct: 482 FAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYK 541

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M+  G  P  +T+ ++I+     GDL   R +   +  KGL P++VTYT L++A+   G 
Sbjct: 542 MIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGN 601

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           ++  F +  EM+   + P  +TY  LI GLCR  ++ ++  L   M  +G+LP+  TY  
Sbjct: 602 MQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNT 661

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +I   C      +AL+LY  ML    +P   T+  L+
Sbjct: 662 IIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLI 698



 Score =  265 bits (677), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 169/526 (32%), Positives = 264/526 (50%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           SI  ++ ++  + K  +++     F  M++NGLL D  + N ++  L   G   +A    
Sbjct: 270 SIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFT 329

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M + G++P +VTYNT+   F   G M  A +++ +M  +G +P+ VTY  LI G  + 
Sbjct: 330 DDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQM 389

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G +E+A  L ++ L  G K++   YN ++    + G + EAL L +EM T  + P    Y
Sbjct: 390 GNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVY 449

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           +ILI+GLCK G V  A   + +M  K   P   +   +L G  ++GNI EA   FD    
Sbjct: 450 SILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTR 509

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
            +L+  VV YN +IDG  R   +  A QL   MI +GI P V+T+  ++NG C+ G+L  
Sbjct: 510 MDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLME 569

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           AR+    +  KGL P    YTT +    ++G+  E +    EM A    P  +TY VL+ 
Sbjct: 570 ARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIK 629

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           GLC+   + E+ +LL  M   G +PD +TY +II    +  ++ +   L+N ML     P
Sbjct: 630 GLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDP 689

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
           T VTY VLI+A    G L+        ++ + I     TY  +I   C   ++ +A G F
Sbjct: 690 TQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYF 749

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
             M  +G + +   Y+ +IN  C  G   EA   +  ML   + PD
Sbjct: 750 NQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPD 795



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 141/487 (28%), Positives = 241/487 (49%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P + + N I+      G    AR  + +M + G+     +YN +L   C  G M EAL  
Sbjct: 269 PSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGF 328

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
             +M+  G  P+ VTYN L  GF   G +  AR +++ ML  GL     +Y  +ICG+ +
Sbjct: 329 TDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQ 388

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
            G + EAL L +E ++RG    +  YN+L+  LCK GR+ +A   F EM    + PD I 
Sbjct: 389 MGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIV 448

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           Y+ L++G C+ G +  A+ L++++R +   P       ++ GL + G++  A+   +   
Sbjct: 449 YSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWT 508

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
              ++ DV+ Y IM++G  ++  ++ A + + +M+ +G+ P    + T I G  + GD  
Sbjct: 509 RMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLM 568

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           EA ++ E +  KG  P ++TY  L++  C++G+++E    L +M  +  +P H+TYT +I
Sbjct: 569 EARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLI 628

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
                   +     L   M  KGL P  VTY  +I        +  A   ++ M +    
Sbjct: 629 KGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCD 688

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           P  +TY  LIN LC    +     + + +E+  I   K TY  +I  +C  G   +AL  
Sbjct: 689 PTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGY 748

Query: 686 YKEMLDR 692
           + +ML +
Sbjct: 749 FNQMLAK 755



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 108/371 (29%), Positives = 183/371 (49%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K+  V++   ++ +M      P       ++  L  NG   +AR  +       +   +V
Sbjct: 458 KEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVV 517

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
            YN M+D + +   + EA++L ++M  RG +P+ VT+N LI GF R G+L +AR ++  +
Sbjct: 518 LYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVI 577

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
              GL  S  +Y  ++  Y E G + E  +   EM    V PT  TY +LI GLC+  ++
Sbjct: 578 RLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKM 637

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            ++      M  K ++PD ++YNT++  +C+   I +A  L++ +   N  PT VTY  L
Sbjct: 638 HESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVL 697

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           I+ LC +GDL+   ++  ++ ++ I     TY  ++   C  G +S A  +FN+ML KG 
Sbjct: 698 INALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGF 757

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
                 Y+  I    K G  +EA      ML++G  PD      +++   + G+     E
Sbjct: 758 VISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFE 817

Query: 545 LLRKMVGDGFI 555
            L  +V  GFI
Sbjct: 818 FLAMVVKSGFI 828



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 170/342 (49%), Gaps = 8/342 (2%)

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL--EVAQQLKEN 443
           ++ L + Y R   I +A  +  +++  N   +V TYN+L+  + R+ D+  +V  ++K +
Sbjct: 173 WDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNM-RHTDIMWDVYNEIKVS 231

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
               G      T +I+++G C+   L  A  F ++   K + P   +  T ++   K+G 
Sbjct: 232 ----GAPQSECTTSILIHGLCEQSKLEDAISFLHDS-NKVVGPSIVSINTIMSKFCKVGL 286

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
              A      M+  G   D  +YN+L+HGLC  GS++EA      M   G  PD +TY +
Sbjct: 287 IDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNT 346

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           +    L +G +   R +   ML +GL+P LVTYT LI  H   G +E A     E   +G
Sbjct: 347 LAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRG 406

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
            + NVI YN L++ LC++ RI++A  LF +ME   + P+   Y+ILI+  C  G  Q A 
Sbjct: 407 FKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAY 466

Query: 684 RLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
           +LY++M  +   P +    A+LL          A  Y ++ T
Sbjct: 467 QLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWT 508


>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
 gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
          Length = 795

 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 185/597 (30%), Positives = 294/597 (49%), Gaps = 74/597 (12%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           ++L +Y +K MV+  L VF+ M + G  P +++CN ++  L   G S  A  VY  M   
Sbjct: 1   MILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRL 60

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
            I P + T   M++++CK G+++ A+E + EM+  G   N V+YN L+ G+   G++E A
Sbjct: 61  DIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGA 120

Query: 298 RGLIRDMLKLGLK------------------------------------VSAHSYNPIIC 321
           +G+++ M + G+                                     V  ++Y  +I 
Sbjct: 121 KGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALID 180

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           GY + G + +A+ + +EM+  G+   L   N LI G CK G+V +       M + ++ P
Sbjct: 181 GYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKP 240

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           D  SY TL+ GYCR G   +AF + D++  + + PTVVTYNTL+ GLCR+GD + A +L 
Sbjct: 241 DSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLW 300

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
             M+ +G+ P+ + Y  +++G  KMG+ S A   ++++L +G+    +A+ T I G  K+
Sbjct: 301 HLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKM 360

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
           G+   A    + M   G  PD ITY  L  G CK+G++EEA ++  KM  +   P    Y
Sbjct: 361 GEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMY 420

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
            S+I        + +  DL   M  +GLSP +VTY  LI     +GRL+ AF  + EM  
Sbjct: 421 NSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIG 480

Query: 622 KGIRPNVITYNALINGLCRLRRIDQA---------YGLFID------------------- 653
           KG  PNVI  + +++ L RL RID+A         + L +D                   
Sbjct: 481 KGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWK 540

Query: 654 ----MEEEGI---LPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD---YCT 700
               ++E  I   LPN   Y I +   C +G   +A R +  +      PD   YCT
Sbjct: 541 IADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCT 597



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 170/551 (30%), Positives = 265/551 (48%), Gaps = 71/551 (12%)

Query: 226 KAREVYRMM-GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVL 284
           +A +V R M  E G+      Y  ++D +CK G+M +A+ +  EM   G   N    N L
Sbjct: 154 EAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSL 213

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           I G+ +NG++ +   L+  M KL LK  ++SY  ++ GY   GL  +A N+ ++M+ +G+
Sbjct: 214 INGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGI 273

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
            PT+ TYN L+ GLC++G   DA   +  ML++ V P+ + Y TLL G  + G+   A  
Sbjct: 274 EPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALT 333

Query: 405 LFDELRSRNL-----------------------------------VPTVVTYNTLIDGLC 429
           L+D++ +R +                                    P  +TY TL DG C
Sbjct: 334 LWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYC 393

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
           + G++E A ++KE M  + I P +  Y  ++ G      +S   +   EM  +GL P+  
Sbjct: 394 KVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVV 453

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
            Y   IAG    G   +A+    EM+ KGF P++I  + +V  L +LG ++EAN LL+KM
Sbjct: 454 TYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKM 513

Query: 550 VGDGFIPDH-----------------------------------ITYTSIIHASLEMGDL 574
           V    + DH                                   + Y   +    + G +
Sbjct: 514 VDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKV 573

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
              R  F  +     +P   TY  LIH  +A G +  AF    EM  KG+ PN+ TYNAL
Sbjct: 574 NDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNAL 633

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           +NGLC+   +D+A  LF  +  +G++PN  TY ILI+  C +G+ +EAL L  +ML   I
Sbjct: 634 LNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGI 693

Query: 695 EPDYCTHSALL 705
            P   T+S+L+
Sbjct: 694 SPSIITYSSLI 704



 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 178/600 (29%), Positives = 287/600 (47%), Gaps = 16/600 (2%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           A +  R +E + GV  DE+ +  +++   + G +  A  V + ++ V +           
Sbjct: 155 AEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLK---------- 204

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKN-CNRIIKVLRDNGFSV 225
               +++ + + L+  Y K   V +   +   M +  L PD  + C  +    RD G S 
Sbjct: 205 ----MNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRD-GLSS 259

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           KA  V   M   GI+P++VTYNT+L   C+ G+ ++AL L   M  RG +PN V Y  L+
Sbjct: 260 KAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLL 319

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            G  + G+  +A  L  D+L  G+  S +++N +I G  + G +  A    + M   G  
Sbjct: 320 DGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCK 379

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P   TY  L  G CK G V +A     +M ++ + P I  YN+L+ G   S  I +   L
Sbjct: 380 PDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDL 439

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
             E+ +R L P VVTY  LI G C  G L+ A      MI +G  P+VI  + +V+   +
Sbjct: 440 LAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYR 499

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
           +G +  A     +M+   L  D          +++  D  +     +E   K   P+ + 
Sbjct: 500 LGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVV 559

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           YN+ + GLCK G + +A      +    F PD+ TY ++IH     G +    +L + M+
Sbjct: 560 YNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMV 619

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
            KGL P + TY  L++     G L+ A   F ++ +KG+ PNV+TYN LI+G C+     
Sbjct: 620 NKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPR 679

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +A  L   M +EGI P+  TY+ LIN  C   + +EA++L  EM    ++    T S L+
Sbjct: 680 EALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLV 739



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 157/520 (30%), Positives = 260/520 (50%), Gaps = 18/520 (3%)

Query: 120 VKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLL 179
           +K D + +CT+++     GL   A+             + D ++  G+    ++   + L
Sbjct: 238 LKPDSYSYCTLVDGYCRDGLSSKAF------------NVCDQMLRKGIEP--TVVTYNTL 283

Query: 180 LLIYTKKSMVEQCLLVFNKMLRNGLLP-DVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L    +    +  L +++ ML+ G+ P +V  C  +  + +   FS +A  ++  +   G
Sbjct: 284 LKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFS-RALTLWDDILARG 342

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           I  SI  +NTM++  CK GEM  A E    M+  GC P+G+TY  L  G+ + G +E+A 
Sbjct: 343 INKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAF 402

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            +   M K  +  S   YN +I G      + + ++L  EM TRG++P + TY  LI G 
Sbjct: 403 KIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGW 462

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C  GR+  A   +FEM+ K   P++I  + ++    R G I EA +L  ++   +LV   
Sbjct: 463 CDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDH 522

Query: 419 VTYNTLIDGLCRYGDL-EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
                  +   R  D  ++A  L E+ I    LP+ + Y I + G CK G ++ AR FF 
Sbjct: 523 RCLEDFQNADIRKLDCWKIADTLDESAIKFS-LPNNVVYNIAMAGLCKSGKVNDARRFFL 581

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            +      PD F Y T I G    G  +EA+ L++EM+ KG  P++ TYN L++GLCK G
Sbjct: 582 GLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSG 641

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            L+ A  L  K+   G IP+ +TY  +I    + G  R   DL   ML++G+SP+++TY+
Sbjct: 642 YLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYS 701

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
            LI+    +  +E A    +EM+   +   + T++ L+ G
Sbjct: 702 SLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEG 741



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 129/466 (27%), Positives = 217/466 (46%), Gaps = 81/466 (17%)

Query: 191 QCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTML 250
           + L +++ +L  G+   +   N +I  L   G    A+E ++ M E G KP  +TY T+ 
Sbjct: 330 RALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLS 389

Query: 251 DSFCKEGEMQEA-----------------------------------LELLWEMQGRGCS 275
           D +CK G ++EA                                   ++LL EM  RG S
Sbjct: 390 DGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLS 449

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           PN VTY  LI G+   G L++A     +M+  G   +    + I+      G + EA  L
Sbjct: 450 PNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANML 509

Query: 336 EEEMVTRGVA-----------------------------------PTLATYNILIYGLCK 360
            ++MV   +                                    P    YNI + GLCK
Sbjct: 510 LQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCK 569

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G+V+DAR  F  +   +  PD  +Y TL++G+  +G + EAF L DE+ ++ LVP + T
Sbjct: 570 SGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITT 629

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YN L++GLC+ G L+ A++L + +  +G++P+V+TY I+++G CK G+   A +   +ML
Sbjct: 630 YNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKML 689

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           ++G+ P    Y++ I G  K  D  EA +L  EM A      + T++ LV G  + G ++
Sbjct: 690 KEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVK 749

Query: 541 EANELLRKMVGDGFIPDHITYTS---IIHASLEMGDLRRGRDLFNN 583
           + ++L   M        H+   S     H  +E+ +L   +++ ++
Sbjct: 750 KMSKLHNMM--------HMACPSAGITSHKQMELSELSNAKEMLDS 787



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/108 (23%), Positives = 56/108 (51%)

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           +++  +A +G ++ A   F  M   G +P++ + N+L++ L +      A  ++  M   
Sbjct: 1   MILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRL 60

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            I+P+ +T  I++N  C AG  + A+   +EM     E +  ++++L+
Sbjct: 61  DIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLV 108


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 154/540 (28%), Positives = 281/540 (52%), Gaps = 8/540 (1%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV---- 244
           ++  + +F  M+++  LP +   N+++  +      +K  +V   +GE   +  IV    
Sbjct: 66  LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIA----KMKKFDVVISLGEKMQRLEIVHGLY 121

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TYN +++ FC+  ++  AL LL +M   G  P+ VT + L+ G+     +  A  L+  M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           +++G +    ++  +I G        EA+ L + MV RG  P L TY +++ GLCK G  
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
             A +   +M    +  D++ +NT++   C+  ++ +A  LF E+ ++ + P VVTY++L
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           I  LC YG    A QL  +MI + I P+++T+  +++   K G    A + +++M+++ +
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            PD F Y + + G        +A ++ E M++K   PD++TYN L+ G CK   +E+  E
Sbjct: 362 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 421

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           L R+M   G + D +TYT++I      GD    + +F  M+  G+ P ++TY++L+    
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 481

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
             G+LE A   F  MQ   I+ ++  Y  +I G+C+  ++D  + LF  +  +G+ PN  
Sbjct: 482 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 541

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           TY  +I+  C+    QEA  L K+M +    P+  T++ L+   L    K  + E +  +
Sbjct: 542 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 127/435 (29%), Positives = 220/435 (50%)

Query: 271 GRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLV 330
           GR  S     Y  ++     + +L+ A GL   M+K     S   +N ++   ++     
Sbjct: 43  GRAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFD 102

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
             ++L E+M    +   L TYNILI   C+  ++S A     +M++    P I++ ++LL
Sbjct: 103 VVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
            GYC    I +A  L D++      P  +T+ TLI GL  +     A  L + M+ +G  
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
           P+++TY ++VNG CK G+  +A    N+M    ++ D   + T I    K     +A  L
Sbjct: 223 PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNL 282

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
            +EM  KG  P+++TY+ L+  LC  G   +A++LL  M+     P+ +T+ ++I A ++
Sbjct: 283 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 342

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
            G       L+++M+++ + P + TY  L++      RL+ A   F  M  K   P+V+T
Sbjct: 343 EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT 402

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           YN LI G C+ +R++    LF +M   G++ +  TYT LI    + G+   A +++K+M+
Sbjct: 403 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 462

Query: 691 DREIEPDYCTHSALL 705
              + PD  T+S LL
Sbjct: 463 SDGVPPDIMTYSILL 477



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 143/511 (27%), Positives = 242/511 (47%), Gaps = 77/511 (15%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           ++L+  + ++S +   L +  KM++ G  P +   + ++           A  +   M E
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G +P  +T+ T++       +  EA+ L+  M  RGC PN VTY V++ G  + G+ + 
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 243

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  L+  M    ++     +N II    +   + +ALNL +EM T+G+ P + TY+ LI 
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303

Query: 357 GLCKWGRVSDARH----------------------------RFFE-------MLRKNVIP 381
            LC +GR SDA                              +F E       M+++++ P
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY---------- 431
           DI +YN+L+ G+C    + +A  +F+ + S++  P VVTYNTLI G C+           
Sbjct: 364 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 423

Query: 432 -------------------------GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
                                    GD + AQ++ + M++ G+ PD++TY+I+++G C  
Sbjct: 424 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 483

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G L  A E F+ M +  ++ D + YTT I G  K G   + + L   +  KG  P+++TY
Sbjct: 484 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 543

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           N ++ GLC    L+EA  LL+KM  DG +P+  TY ++I A L  GD     +L   M  
Sbjct: 544 NTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603

Query: 587 ---KGLSPTLVTYTVLIHAHAARGRLELAFM 614
               G + T+     ++H     GRL+ +F+
Sbjct: 604 CRFVGDASTIGLVANMLH----DGRLDKSFL 630



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 130/460 (28%), Positives = 226/460 (49%)

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           Y  +L +   + ++ +A+ L   M      P+ V +N L++  ++  + +    L   M 
Sbjct: 53  YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
           +L +    ++YN +I  +  +  +  AL L  +M+  G  P++ T + L+ G C   R+S
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
           DA     +M+     PD I++ TL++G        EA  L D +  R   P +VTY  ++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           +GLC+ GD ++A  L   M    I  DV+ +  +++  CK  ++  A   F EM  KG++
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           P+   Y++ I+     G  S+A +L  +M+ K   P+L+T+N L+    K G   EA +L
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
              M+     PD  TY S+++       L + + +F  M+ K   P +VTY  LI     
Sbjct: 353 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 412

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
             R+E     F EM  +G+  + +TY  LI GL      D A  +F  M  +G+ P+  T
Sbjct: 413 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 472

Query: 666 YTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           Y+IL++  CN G  ++AL ++  M   EI+ D   ++ ++
Sbjct: 473 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 512



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 187/381 (49%), Gaps = 21/381 (5%)

Query: 346 PTLATYNILIYGLCKWGR---------------------VSDARHRFFEMLRKNVIPDII 384
           P +A  +I + G+C WGR                     + DA   F  M++   +P I+
Sbjct: 27  PRIAPSSIDLCGMCYWGRAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIV 86

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
            +N LL    +         L ++++   +V  + TYN LI+  CR   + +A  L   M
Sbjct: 87  EFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKM 146

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
           +  G  P ++T + ++NG C    +S A    ++M+  G +PD   +TT I G       
Sbjct: 147 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 206

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
           SEA  L + M+ +G  P+L+TY V+V+GLCK G  + A  LL KM       D + + +I
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 266

Query: 565 IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
           I +  +   +    +LF  M  KG+ P +VTY+ LI    + GR   A    S+M  K I
Sbjct: 267 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 326

Query: 625 RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
            PN++T+NALI+   +  +  +A  L+ DM +  I P+ +TY  L+N  C      +A +
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQ 386

Query: 685 LYKEMLDREIEPDYCTHSALL 705
           +++ M+ ++  PD  T++ L+
Sbjct: 387 MFEFMVSKDCFPDVVTYNTLI 407


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  279 bits (714), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 150/454 (33%), Positives = 252/454 (55%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G  P +V+Y+T+++ +C  GE+Q+ L+L+ EMQ +G  PN  TYN +I    ++G+++ A
Sbjct: 5   GDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDA 64

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             ++R+M+  G+      Y  +I G+ + G +  A  L +EM  + + P    Y  +I G
Sbjct: 65  ERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICG 124

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           LC+ G++ +A   F +M  + V PD ++Y TL+ GYC+SG + +AF L +++    L P 
Sbjct: 125 LCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPN 184

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           VVTY  L DGLC+ G ++ A +L   M  +G+  ++ TY  +VNG CK GN+  A +   
Sbjct: 185 VVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLME 244

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           EM   G+ PD   +TT +    K G+  +A+ L  EML +G  P +IT+NVL++G C  G
Sbjct: 245 EMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSG 304

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            LE+   LL  M+  G +P+  TY S++       ++R   +++  M  +G+ P   TY 
Sbjct: 305 MLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYN 364

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           +LI  H     ++ A+    EM  KG      +YN++I G  + ++I +A  LF +M  E
Sbjct: 365 ILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRRE 424

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           G+  +   Y + ++ +   GN + AL L  E ++
Sbjct: 425 GMAADAEIYNLFVDISYGEGNMETALELCDEAIE 458



 Score =  278 bits (712), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 143/378 (37%), Positives = 218/378 (57%)

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           SY+ +I GY   G L + L L +EM  +G+ P L TYN +I  LCK G+V DA     EM
Sbjct: 12  SYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREM 71

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           + + ++PD + Y TL+ G+C+ GNI  A+ LFDE+  + +VP  + Y  +I GLCR G +
Sbjct: 72  INQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKM 131

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
             A ++   M ++G+ PD +TYT +++G CK G +  A    N+M++ GL P+   YT  
Sbjct: 132 MEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTAL 191

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
             G  KLG    A  L  EM  KG   ++ TYN LV+GLCK G++ +A +L+ +M   G 
Sbjct: 192 ADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGM 251

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            PD IT+T+++ A  + G++ +  +L   ML +GL PT++T+ VL++     G LE    
Sbjct: 252 YPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGER 311

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
             + M  KGI PN  TYN+L+   C    +     ++  M   G++P+  TY ILI  +C
Sbjct: 312 LLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHC 371

Query: 675 NAGNWQEALRLYKEMLDR 692
            A N +EA  L+KEM ++
Sbjct: 372 KARNMKEAWFLHKEMAEK 389



 Score =  272 bits (696), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 149/429 (34%), Positives = 232/429 (54%)

Query: 269 MQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
           M+ RG +P+ V+Y+ +I G+   GEL++   LI++M   GLK + ++YN II    + G 
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 329 LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNT 388
           + +A  +  EM+ +G+ P    Y  LI G CK G +  A   F EM ++ ++PD I+Y  
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 389 LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
           ++ G CR G + EA  +F+++ SR + P  VTY TLIDG C+ G++E A  L   M+  G
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
           + P+V+TYT + +G CK+G +  A E  +EM  KGLQ +   Y + + G  K G+  +A 
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV 240

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
           +L EEM   G  PD IT+  L+   CK G + +A+ELLR+M+  G  P  IT+  +++  
Sbjct: 241 KLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGF 300

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
              G L  G  L   ML KG+ P   TY  L+  +  R  +      +  M  +G+ P+ 
Sbjct: 301 CMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDS 360

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
            TYN LI G C+ R + +A+ L  +M E+G      +Y  +I          EA  L++E
Sbjct: 361 NTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEE 420

Query: 689 MLDREIEPD 697
           M    +  D
Sbjct: 421 MRREGMAAD 429



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 128/367 (34%), Positives = 206/367 (56%)

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
           M  RG AP + +Y+ +I G C  G +        EM  K + P++ +YN+++   C+SG 
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           + +A  +  E+ ++ +VP  V Y TLIDG C+ G+++ A +L + M  Q I+PD I YT 
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           ++ G C+ G +  A + FN+M  +G++PD   YTT I G  K G+  +A+ L  +M+  G
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
             P+++TY  L  GLCKLG ++ ANELL +M G G   +  TY S+++   + G++R+  
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV 240

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
            L   M   G+ P  +T+T L+ A+   G +  A     EM  +G++P VIT+N L+NG 
Sbjct: 241 KLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGF 300

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
           C    ++    L   M E+GI+PN  TY  L+ + C   N +    +YK M  R + PD 
Sbjct: 301 CMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDS 360

Query: 699 CTHSALL 705
            T++ L+
Sbjct: 361 NTYNILI 367



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 138/428 (32%), Positives = 221/428 (51%), Gaps = 6/428 (1%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +++ L +  +M   GL P++   N II +L  +G    A  V R M   GI P  V Y T
Sbjct: 26  LQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTT 85

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++D FCK G +Q A +L  EM+ +   P+ + Y  +I G  R G++ +A  +   M   G
Sbjct: 86  LIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRG 145

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           ++    +Y  +I GY + G + +A +L  +MV  G+ P + TY  L  GLCK G+V  A 
Sbjct: 146 VEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTAN 205

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               EM  K +  +I +YN+L+ G C+SGNI +A  L +E+    + P  +T+ TL+D  
Sbjct: 206 ELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAY 265

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G++  A +L   M+++G+ P VIT+ +++NG C  G L         ML KG+ P+ 
Sbjct: 266 CKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNT 325

Query: 489 FAYTT---QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
             Y +   Q      +  T+E Y+    M A+G  PD  TYN+L+ G CK  +++EA  L
Sbjct: 326 TTYNSLMKQYCIRNNMRCTTEIYK---GMCARGVMPDSNTYNILIKGHCKARNMKEAWFL 382

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
            ++M   GF     +Y SII    +   +   R+LF  M R+G++     Y + +     
Sbjct: 383 HKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYG 442

Query: 606 RGRLELAF 613
            G +E A 
Sbjct: 443 EGNMETAL 450



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 132/434 (30%), Positives = 217/434 (50%)

Query: 203 GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           G  PDV + + +I      G   K  ++ + M   G+KP++ TYN+++   CK G++ +A
Sbjct: 5   GDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDA 64

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
             +L EM  +G  P+ V Y  LI GF + G ++ A  L  +M K  +     +Y  +ICG
Sbjct: 65  ERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICG 124

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
               G ++EA  +  +M +RGV P   TY  LI G CK G +  A     +M++  + P+
Sbjct: 125 LCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPN 184

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
           +++Y  L  G C+ G +  A  L  E+  + L   + TYN+L++GLC+ G++  A +L E
Sbjct: 185 VVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLME 244

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            M   G+ PD IT+T +++  CK G +  A E   EML +GLQP    +   + G    G
Sbjct: 245 EMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSG 304

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
              +  RL   ML KG  P+  TYN L+   C   ++    E+ + M   G +PD  TY 
Sbjct: 305 MLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYN 364

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
            +I    +  +++    L   M  KG + T  +Y  +I     + ++  A   F EM+ +
Sbjct: 365 ILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRRE 424

Query: 623 GIRPNVITYNALIN 636
           G+  +   YN  ++
Sbjct: 425 GMAADAEIYNLFVD 438



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 124/437 (28%), Positives = 219/437 (50%), Gaps = 14/437 (3%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G+K + + + +I+ +L +SG +  A  V+  ++     GI+   +           +   
Sbjct: 40  GLKPNLYTYNSIILLLCKSGKVDDAERVLREMI---NQGIVPDTV-----------VYTT 85

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  + K   ++    +F++M +  ++PD      +I  L   G  ++A +V+  M   G
Sbjct: 86  LIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRG 145

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           ++P  VTY T++D +CK GEM++A  L  +M   G +PN VTY  L  G  + G+++ A 
Sbjct: 146 VEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTAN 205

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L+ +M   GL+++  +YN ++ G  + G + +A+ L EEM   G+ P   T+  L+   
Sbjct: 206 ELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAY 265

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           CK G +  A     EML + + P +I++N L+ G+C SG + +   L   +  + ++P  
Sbjct: 266 CKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNT 325

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
            TYN+L+   C   ++    ++ + M  +G++PD  TY I++ G CK  N+  A     E
Sbjct: 326 TTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKE 385

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M  KG      +Y + I G  K    SEA  L EEM  +G   D   YN+ V      G+
Sbjct: 386 MAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGN 445

Query: 539 LEEANELLRKMVGDGFI 555
           +E A EL  + + + F+
Sbjct: 446 METALELCDEAIENCFL 462



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 97/278 (34%), Positives = 150/278 (53%)

Query: 447 QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSE 506
           +G  PDV++Y+ ++NG C  G L    +   EM  KGL+P+ + Y + I    K G   +
Sbjct: 4   RGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDD 63

Query: 507 AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
           A R+  EM+ +G  PD + Y  L+ G CKLG+++ A +L  +M     +PD I YT++I 
Sbjct: 64  AERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVIC 123

Query: 567 ASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRP 626
                G +     +FN M  +G+ P  VTYT LI  +   G +E AF   ++M   G+ P
Sbjct: 124 GLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP 183

Query: 627 NVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLY 686
           NV+TY AL +GLC+L ++D A  L  +M  +G+  N  TY  L+N  C +GN ++A++L 
Sbjct: 184 NVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLM 243

Query: 687 KEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           +EM    + PD  T + L+         V A E L  +
Sbjct: 244 EEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREM 281


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  279 bits (713), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 164/518 (31%), Positives = 264/518 (50%), Gaps = 41/518 (7%)

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG---CSPNGVTYNVLITGF 288
           R M EFG  P + +Y+ +L  FC E   +EALELL  M   G    +PN VTY  +I G 
Sbjct: 153 RRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGL 212

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
            +   +++A+G+ + M+  G++ + H+Y  +I GY   G   E + + +EM T G+ P  
Sbjct: 213 CKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDC 272

Query: 349 ATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN---------- 398
             Y +L+  LCK GR ++AR+ F  ++RK + P++  Y  LL+GY   G+          
Sbjct: 273 YIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDL 332

Query: 399 -------------------------IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
                                    I EA  +FD++R + L P +VTY  LID LC+ G 
Sbjct: 333 MVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGR 392

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           ++ A      MI++G+ PD+  ++ +V G C +     A E F E+L +G++ D   + T
Sbjct: 393 VDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNT 452

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            +    + G   EA RL + ML  G  PD+I+YN LV G C  G ++EA +LL  +V  G
Sbjct: 453 LMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIG 512

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
             PD +TY +++H   +   +     LF  ML KGL+P +VTY  ++H     GR   A 
Sbjct: 513 LKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAK 572

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
             +  M     + N+ TYN +INGLC+   +D+A+ +F  +  + +  + +T  I+I   
Sbjct: 573 ELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGAL 632

Query: 674 CNAGNWQEALRLYKEMLDREIEPD---YCTHSALLLKQ 708
              G  ++A+ L+  +    + PD   YC  +  L+K+
Sbjct: 633 LKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKE 670



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 158/525 (30%), Positives = 263/525 (50%), Gaps = 8/525 (1%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSV-KAREVYRMMGEF---GIK 240
           K  MV++   VF  M+  G+ P+    N     L     S+ K +EV +M+ E    G++
Sbjct: 214 KAQMVDRAKGVFQHMIDKGVRPN----NHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQ 269

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P    Y  +LD  CK G   EA  +   +  +G  PN   Y +L+ G++  G L +    
Sbjct: 270 PDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSF 329

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  M+  G+    H +N + C Y++K ++ EA+++ ++M  + ++P + TY  LI  LCK
Sbjct: 330 LDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCK 389

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            GRV DA  +F +M+ + + PDI  +++L+YG C      +A  LF E+  + +    V 
Sbjct: 390 LGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVF 449

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           +NTL+  LCR G +  AQ+L + M+  G+ PDVI+Y  +V+G C  G +  A +  + ++
Sbjct: 450 FNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIV 509

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
             GL+PD+  Y T + G  K     +AY L  EML KG  PD++TYN ++HGL + G   
Sbjct: 510 SIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFS 569

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA EL   M+      +  TY  II+   +   +     +F+++  K L   + T  ++I
Sbjct: 570 EAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMI 629

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
            A    GR E A   F+ +   G+ P+V TY  +   L +   +++   LF  MEE G  
Sbjct: 630 GALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTA 689

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           PN      L+    + G+   A     ++ ++    +  T S L+
Sbjct: 690 PNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSMLI 734



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 140/492 (28%), Positives = 244/492 (49%), Gaps = 15/492 (3%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G++ D +++  +L+ L ++G             C     I D +I  G+    ++ I  +
Sbjct: 267 GLQPDCYIYAVLLDYLCKNGR------------CTEARNIFDSVIRKGIKP--NVTIYGI 312

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL  Y  +  + +     + M+ NG+ PD    N +           +A  ++  M +  
Sbjct: 313 LLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQR 372

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           + P+IVTY  ++D+ CK G + +A+    +M   G +P+   ++ L+ G     + E+A 
Sbjct: 373 LSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAE 432

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L  ++L  G+++    +N ++C    +G ++EA  L + M+  GV P + +YN L+ G 
Sbjct: 433 ELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGH 492

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C  GR+ +A      ++   + PD ++YNTLL+GYC++  I +A+ LF E+  + L P V
Sbjct: 493 CLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDV 552

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           VTYNT++ GL + G    A++L  +MIN     ++ TY I++NG CK   +  A + F+ 
Sbjct: 553 VTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHS 612

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           +  K LQ D F     I   LK G   +A  L   + A G  PD+ TY ++   L K GS
Sbjct: 613 LCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGS 672

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           LEE +EL   M  +G  P+     +++   L  GD+ R     + +  K  S    T ++
Sbjct: 673 LEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSM 732

Query: 599 LIHAHAARGRLE 610
           LI  + +RG  +
Sbjct: 733 LISIY-SRGEYQ 743



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 141/511 (27%), Positives = 232/511 (45%), Gaps = 46/511 (9%)

Query: 241 PSIVTYNTMLDSFCKE--GEMQEALELLWEMQGRGCS----PNGVTYNVLITGFSRNGEL 294
            S+  +N +L +  +       E +  L+    R CS    P+  TY +LI  F R G L
Sbjct: 49  ASVRAFNQLLTAVSRARCSSASELVVSLFNRMIRECSIKVAPSSFTYTILIGCFCRMGRL 108

Query: 295 EQ---ARGLI----------------------------------RDMLKLGLKVSAHSYN 317
           +    A GLI                                  R M + G      SY+
Sbjct: 109 KHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYS 168

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVA---PTLATYNILIYGLCKWGRVSDARHRFFEM 374
            ++ G+  +    EAL L   M   G     P + TY  +I GLCK   V  A+  F  M
Sbjct: 169 ILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHM 228

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           + K V P+  +Y  L++GY   G   E   +  E+ +  L P    Y  L+D LC+ G  
Sbjct: 229 IDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRC 288

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
             A+ + +++I +GI P+V  Y I+++G    G+LS    F + M+  G+ PD   +   
Sbjct: 289 TEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIM 348

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
                K     EA  + ++M  +   P+++TY  L+  LCKLG +++A     +M+ +G 
Sbjct: 349 FCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGM 408

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            PD   ++S+++    +    +  +LF  +L +G+    V +  L+      GR+  A  
Sbjct: 409 TPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQR 468

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
               M   G+RP+VI+YN L++G C   RID+A  L   +   G+ P+K TY  L++  C
Sbjct: 469 LIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYC 528

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            A    +A  L++EML + + PD  T++ +L
Sbjct: 529 KARRIDDAYSLFREMLMKGLTPDVVTYNTIL 559



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 160/350 (45%), Gaps = 27/350 (7%)

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG--EAFLLFDELRSRNLVPTVVT 420
           RV+ A  R  E+ R  VI D             SG++G  +A  LFDE+ +     +V  
Sbjct: 6   RVTAAADRCLELER--VIAD----------RAHSGSLGLNDALKLFDEMLTHARPASVRA 53

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQ-------GILPDVITYTIMVNGSCKMGNLSMAR 473
           +N L+  + R      A +L  ++ N+        + P   TYTI++   C+MG L    
Sbjct: 54  FNQLLTAVSR-ARCSSASELVVSLFNRMIRECSIKVAPSSFTYTILIGCFCRMGRLKHGF 112

Query: 474 EFFNEMLRKGLQ-PDRFAYTTQIAGELKLGDTSEAYR-LQEEMLAKGFPPDLITYNVLVH 531
             F  +L+ G +  D   ++  + G        EA   L   M   G  PD+ +Y++L+ 
Sbjct: 113 AAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLK 172

Query: 532 GLCKLGSLEEANELLRKMVGDG---FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           G C     EEA ELL  M  DG     P+ +TYT++I    +   + R + +F +M+ KG
Sbjct: 173 GFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKG 232

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
           + P   TYT LIH + + G+ +       EM   G++P+   Y  L++ LC+  R  +A 
Sbjct: 233 VRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEAR 292

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
            +F  +  +GI PN   Y IL++     G+  E       M+   + PD+
Sbjct: 293 NIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDH 342



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 105/246 (42%), Gaps = 12/246 (4%)

Query: 203 GLLPDVKNCNRIIKVLRDNGFSVKAREV------YRMMGEFGIKPSIVTYNTMLDSFCKE 256
           GL PD    N ++     +G+  KAR +      +R M   G+ P +VTYNT+L    + 
Sbjct: 512 GLKPDKVTYNTLL-----HGY-CKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQT 565

Query: 257 GEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSY 316
           G   EA EL   M       N  TYN++I G  +N  +++A  +   +    L++   + 
Sbjct: 566 GRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTA 625

Query: 317 NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
           N +I    + G   +A++L   +   G+ P + TY ++   L K G + +    F  M  
Sbjct: 626 NIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEE 685

Query: 377 KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
               P+    N L+      G+I  A     +L  +N      T + LI    R    ++
Sbjct: 686 NGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSMLISIYSRGEYQQL 745

Query: 437 AQQLKE 442
           A+ L E
Sbjct: 746 AKSLPE 751


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  279 bits (713), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 157/465 (33%), Positives = 249/465 (53%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G+ P+  T N +++ FC+   +     +L +    G  P  VT+  LI G  + G+  QA
Sbjct: 5   GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQA 64

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L  DM+  G +   ++Y  II G  + G    A  L ++M   G    + TY+ LI+ 
Sbjct: 65  VELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHS 124

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           LCK+ RV++A   F  M  K++ P I +Y +L+ G C      EA  L +E+ S N++P 
Sbjct: 125 LCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPN 184

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           VVT+N L+D  C+ G +  A+ + + M   G+ PDV+TY  ++ G      +  AR+ F+
Sbjct: 185 VVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFD 244

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            M+ KG +PD F+Y+  I G  K     EA +L  EM+ +G  P+ ++YN L+HGLC+LG
Sbjct: 245 VMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLG 304

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            L EA +L + M  +G +P+  TY  ++    + G L +   LF  M    L P LV Y 
Sbjct: 305 RLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYN 364

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           +L++A    G L+ A   FSE+ V G++PNV  Y  +INGLC+   +D+A   F +ME++
Sbjct: 365 ILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDD 424

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
           G  P++++Y ++I       +   A+ L  EM DR    D  T +
Sbjct: 425 GCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGTTA 469



 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 142/453 (31%), Positives = 245/453 (54%), Gaps = 3/453 (0%)

Query: 269 MQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
           M+  G SPN  T N+LI  F +   ++    ++   +KLGL+ +  ++  +I G  + G 
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 329 LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNT 388
             +A+ L ++MV RG  P   TY  +I GLCK G  + A   F +M       ++++Y+T
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120

Query: 389 LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
           L++  C+   + EA  +F  ++++++ PT+ TY +LI GLC +   + A  L   M +  
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
           I+P+V+T+ ++V+  CK G +  A      M   G++PD   Y + + G     +  EA 
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEAR 240

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
           +L + M+ KG  PD+ +Y++L++G CK   ++EA +L  +M+  G  P++++Y ++IH  
Sbjct: 241 KLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGL 300

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
            ++G LR  +DLF NM   G  P L TY +L+     +G L  AF  F  MQ   ++PN+
Sbjct: 301 CQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNL 360

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
           + YN L+N +C+   +  A  LF ++   G+ PN   YT +IN  C  G   EAL  ++ 
Sbjct: 361 VMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRN 420

Query: 689 MLDREIEPDYCTHSALL---LKQLDKDYKVHAV 718
           M D    PD  +++ ++   L+  D+   VH +
Sbjct: 421 MEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLI 453



 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 148/468 (31%), Positives = 251/468 (53%), Gaps = 10/468 (2%)

Query: 203 GLLPDVKNCNRIIKVL-----RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG 257
           GL P+    N +I         D GFSV A+ +     + G++P+IVT+ T+++   K G
Sbjct: 5   GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGI-----KLGLQPTIVTFTTLINGLGKVG 59

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
           +  +A+EL  +M  RGC P+  TY  +I G  + GE   A GL + M + G +++  +Y+
Sbjct: 60  KFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYS 119

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            +I    +   + EAL++   M  + ++PT+ TY  LI GLC + R  +A     EM   
Sbjct: 120 TLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSL 179

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
           N++P+++++N L+  +C+ G +  A  +   +    + P VVTYN+L+ G   + ++  A
Sbjct: 180 NIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEA 239

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
           ++L + MI +G  PDV +Y+I++NG CK   +  A++ FNEM+ +G  P+  +Y T I G
Sbjct: 240 RKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHG 299

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
             +LG   EA  L + M   G  P+L TY +L+ G CK G L +A  L R M      P+
Sbjct: 300 LCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPN 359

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
            + Y  +++A  + G+L+  R+LF+ +   GL P +  YT +I+     G L+ A   F 
Sbjct: 360 LVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFR 419

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
            M+  G  P+  +YN +I G  + +   +A  L  +M + G + +  T
Sbjct: 420 NMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGT 467



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 136/399 (34%), Positives = 207/399 (51%)

Query: 191 QCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTML 250
           Q + +F+ M+  G  PD      II  L   G +  A  +++ M E G + ++VTY+T++
Sbjct: 63  QAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLI 122

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
            S CK   + EAL++   M+ +  SP   TY  LI G       ++A  L+ +M  L + 
Sbjct: 123 HSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIM 182

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
            +  ++N ++  + ++G ++ A  + + M   GV P + TYN L+YG   W  V +AR  
Sbjct: 183 PNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKL 242

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
           F  M+ K   PD+ SY+ L+ GYC++  I EA  LF+E+  +   P  V+YNTLI GLC+
Sbjct: 243 FDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQ 302

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
            G L  AQ L +NM   G LP++ TY I+++G CK G L  A   F  M    L+P+   
Sbjct: 303 LGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVM 362

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           Y   +    K G+  +A  L  E+   G  P++  Y  +++GLCK G L+EA E  R M 
Sbjct: 363 YNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNME 422

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
            DG  PD  +Y  II   L+  D  R   L   M  +G 
Sbjct: 423 DDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGF 461



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/334 (35%), Positives = 183/334 (54%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V + L +F+ M    + P +     +I+ L +     +A  +   M    I P++VT+N 
Sbjct: 131 VNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNV 190

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++D+FCKEG++  A  +L  M   G  P+ VTYN L+ G+S   E+ +AR L   M+  G
Sbjct: 191 LVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKG 250

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            K    SY+ +I GY +   + EA  L  EM+ +G  P   +YN LI+GLC+ GR+ +A+
Sbjct: 251 CKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQ 310

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F  M     +P++ +Y  LL G+C+ G +G+AF LF  ++S  L P +V YN L++ +
Sbjct: 311 DLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAM 370

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G+L+ A++L   +   G+ P+V  YT ++NG CK G L  A E F  M   G  PD 
Sbjct: 371 CKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDE 430

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
           F+Y   I G L+  D S A  L  EM  +GF  D
Sbjct: 431 FSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITD 464



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 73/138 (52%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +LL  + K+  + +   +F  M    L P++   N ++  +  +G    ARE++  +   
Sbjct: 330 ILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVI 389

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G++P++  Y T+++  CKEG + EALE    M+  GC P+  +YNV+I GF ++ +  +A
Sbjct: 390 GLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRA 449

Query: 298 RGLIRDMLKLGLKVSAHS 315
             LI +M   G    A +
Sbjct: 450 VHLIGEMRDRGFITDAGT 467


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  279 bits (713), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 174/553 (31%), Positives = 278/553 (50%), Gaps = 33/553 (5%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLR-------------DN 221
           +LD +L       MV   L V  KM    L P ++  N ++  LR             D+
Sbjct: 85  VLDQMLQEEVASRMVHDALFVLVKMKEQNLRPSIQTYNSLLYNLRHTDIMWDVYNDIKDS 144

Query: 222 GFSVKARE----VYRMMGEFGIK---------------PSIVTYNTMLDSFCKEGEMQEA 262
           G    AR     V  + G+   +               PS+V++NT++  +CK G    A
Sbjct: 145 GTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVA 204

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
                 M   G  P+  +YN+LI G    G +E+A  L  DM K GL+    +Y  +  G
Sbjct: 205 KSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKG 264

Query: 323 YSEKGLLVEALNLEEEMVT-RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           +   GL+  A  + ++M+T  G+ P L TY +LI G C+ G + +A     ++L      
Sbjct: 265 FHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQL 324

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           ++I Y+ LL   C+ G + EA  L  E+ + NL P +VTY+ LI GLC+ G ++ A QL 
Sbjct: 325 NVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLY 384

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
           + M    I P+   ++ ++ G C+ G LS AR +F+ ++   L+PD   Y   I G +KL
Sbjct: 385 KEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKL 444

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
           GD  EA RL + +  K   P ++T+N L++G CK   + EA  LL  +   G  P  +TY
Sbjct: 445 GDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTY 504

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
           T++++A  E G++ +  +L   M  K + PT+VTYTV+I     + +LE +     +M+ 
Sbjct: 505 TTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRA 564

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
           KG+ P+ ITYN +I   C+ + + +A+ L  DM    + P   TY +LI+  C  G+ ++
Sbjct: 565 KGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVED 624

Query: 682 ALRLYKEMLDREI 694
           A R+   + DR I
Sbjct: 625 ADRVLVSLQDRNI 637



 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 170/544 (31%), Positives = 269/544 (49%), Gaps = 36/544 (6%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K  + +     F  ML+ G+LPD  + N +I  L   G   +A E+   M + G++P 
Sbjct: 195 YCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPD 254

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEM-QGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
           +VTY  +   F   G M  A E++ +M    G  P+ VTY VLI G  + G +E+A  L 
Sbjct: 255 MVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLR 314

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
           RD+L  G +++   Y+ ++    ++G + EAL L  EM    + P L TY+ILI+GLCK 
Sbjct: 315 RDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQ 374

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           G+V  A   + EM    + P+  +++ +L G C  G + +A + FD L   NL P V  Y
Sbjct: 375 GKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLY 434

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           N +IDG  + GD+E A +L + + ++ I P ++T+  ++ G CK   +  AR     +  
Sbjct: 435 NIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKL 494

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
            GL+P    YTT +    + G+ ++ + L  EM  K   P ++TY V++ GLCK   LEE
Sbjct: 495 HGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEE 554

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL-- 599
           + +LL  M   G  PD ITY +II    +  D+R+  +L ++ML   L PT  TY VL  
Sbjct: 555 SVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLID 614

Query: 600 ---------------------------------IHAHAARGRLELAFMYFSEMQVKGIRP 626
                                            I AH  +G  + A   F +M  KG   
Sbjct: 615 GLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEV 674

Query: 627 NVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLY 686
           ++  Y+A+IN LC+   I++A   F  M  +G+ P++  + +++N    AG+      L 
Sbjct: 675 SIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELL 734

Query: 687 KEML 690
             M+
Sbjct: 735 AVMI 738



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 147/510 (28%), Positives = 255/510 (50%), Gaps = 36/510 (7%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV-YRMMGEFGIKPSIVTY- 246
           +E+ L + N M + GL PD+     + K     G    ARE+  +M+ + G+KP +VTY 
Sbjct: 236 MEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYT 295

Query: 247 ----------------------------------NTMLDSFCKEGEMQEALELLWEMQGR 272
                                             + +L S CK G++ EAL+LL+EM+  
Sbjct: 296 VLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEAN 355

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA 332
              P+ VTY++LI G  + G+++QA  L ++M    +  ++ +++ I+ G  EKG+L +A
Sbjct: 356 NLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDA 415

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
               + ++   + P +  YNI+I G  K G V +A   +  +  K + P I+++N+L+YG
Sbjct: 416 RMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYG 475

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
           +C++  + EA  L + ++   L P+ VTY TL++  C  G++    +L   M  + I P 
Sbjct: 476 FCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPT 535

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
           V+TYT+++ G CK   L  + +   +M  KGL PD+  Y T I    K  D  +A+ L +
Sbjct: 536 VVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLD 595

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           +ML     P   TYNVL+ GLC+ G +E+A+ +L  +         + YT++I A    G
Sbjct: 596 DMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKG 655

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
           D +R   +F+ M+ KG   ++  Y+ +I+    R  +  A  YF  M   G+ P+   + 
Sbjct: 656 DAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFE 715

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
            ++N   R   +   + L   M + G+L +
Sbjct: 716 MMLNAFHRAGHVHSVFELLAVMIKFGLLHD 745



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 114/373 (30%), Positives = 204/373 (54%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K+  V+Q + ++ +M  N + P+    + I+K L + G    AR  +  +    ++P + 
Sbjct: 373 KQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVT 432

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
            YN M+D + K G+++EA+ L   ++ +  +P+ VT+N LI GF +N ++ +AR L+  +
Sbjct: 433 LYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESI 492

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
              GL+ SA +Y  ++  Y E+G + +   L  EM  + + PT+ TY ++I GLCK  ++
Sbjct: 493 KLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKL 552

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            ++     +M  K + PD I+YNT++  +C++ ++ +AF L D++   NL PT  TYN L
Sbjct: 553 EESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVL 612

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           IDGLCRYGD+E A ++  ++ ++ I    + YT M+   C  G+   A + F++M+ KG 
Sbjct: 613 IDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGF 672

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
           +     Y+  I    K    +EA      ML+ G  PD   + ++++   + G +    E
Sbjct: 673 EVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFE 732

Query: 545 LLRKMVGDGFIPD 557
           LL  M+  G + D
Sbjct: 733 LLAVMIKFGLLHD 745



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/398 (29%), Positives = 202/398 (50%), Gaps = 6/398 (1%)

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
           +AL +  +M  + + P++ TYN L+Y L    R +D     +  ++ +  P     ++++
Sbjct: 101 DALFVLVKMKEQNLRPSIQTYNSLLYNL----RHTDIMWDVYNDIKDSGTPQSARTSSII 156

Query: 391 Y-GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
             G C      +A L   +   +   P+VV++NT++   C+ G  +VA+     M+  GI
Sbjct: 157 VDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGI 216

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
           LPD  +Y I+++G    G++  A E  N+M ++GLQPD   Y     G   LG  S A  
Sbjct: 217 LPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGARE 276

Query: 510 LQEEMLA-KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
           + ++ML  +G  PDL+TY VL+ G C++G++EEA  L R ++  GF  + I Y+ ++ + 
Sbjct: 277 IIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSL 336

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
            + G +     L   M    L P LVTY++LIH    +G+++ A   + EM    I PN 
Sbjct: 337 CKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNS 396

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
             ++ ++ GLC    +  A   F  +    + P+   Y I+I+     G+ +EA+RLYK 
Sbjct: 397 FAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKR 456

Query: 689 MLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
           + D+ I P   T ++L+         V A   LES+ L
Sbjct: 457 LRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKL 494



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/400 (22%), Positives = 176/400 (44%), Gaps = 84/400 (21%)

Query: 123 DEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLI 182
           + F    IL+ L E G+L  A    ++++  N+                 + + ++++  
Sbjct: 395 NSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRP--------------DVTLYNIMIDG 440

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K   VE+ + ++ ++    + P +   N +I     N   V+AR +   +   G++PS
Sbjct: 441 YVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPS 500

Query: 243 IVTYNTMLDSFCKEG-----------------------------------EMQEALELLW 267
            VTY T+++++C+EG                                   +++E+++LL 
Sbjct: 501 AVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLE 560

Query: 268 EMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKG 327
           +M+ +G +P+ +TYN +I  F +  ++ +A  L+ DML        H             
Sbjct: 561 DMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDML-------IH------------- 600

Query: 328 LLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYN 387
                 NLE         PT ATYN+LI GLC++G V DA      +  +N+    ++Y 
Sbjct: 601 ------NLE---------PTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYT 645

Query: 388 TLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
           T++  +C  G+   A  +F ++  +    ++  Y+ +I+ LC+   +  A+     M++ 
Sbjct: 646 TMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSD 705

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           G+ PD   + +M+N   + G++    E    M++ GL  D
Sbjct: 706 GVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLLHD 745


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  278 bits (712), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 158/489 (32%), Positives = 254/489 (51%), Gaps = 5/489 (1%)

Query: 205 LPDVKNC--NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           LP+   C  N ++K L   G   + ++ +++  E    P +VTY  M+  +C   E++ A
Sbjct: 248 LPEKNTCSYNILLKALCTAG---RIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELETA 304

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
           ++LL EM  RG   N V Y  +I      G++  A  ++ DM+  G+ + A  +  ++ G
Sbjct: 305 IKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSG 364

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
           +  KG L  A N  +EM  RG+A    TY  LI GLC+ G + +A     EM  K +  D
Sbjct: 365 FCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVD 424

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
            ++Y  L+ GYC+ G + EAFL+ +++  + + P VVTY  L DGLC+ GD+  A +L  
Sbjct: 425 AVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLH 484

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            M ++G+  ++ TY  ++NG CK GNL  A     +M   GL+PD + YTT I    +  
Sbjct: 485 EMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSK 544

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
           +   A+ L +EML KG  P ++TYNVL++G C  G +E    LL  M+     P+  TY 
Sbjct: 545 ELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYN 604

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
           S++       +++   +++  ML + + P   TY +LI  H     ++ A  + SEM  K
Sbjct: 605 SLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEK 664

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
           G R    +YNALI  L + ++  +A  LF  M +E +      Y   I+ + N  N +  
Sbjct: 665 GFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLEST 724

Query: 683 LRLYKEMLD 691
           L L  E+++
Sbjct: 725 LALCDELVE 733



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 130/421 (30%), Positives = 211/421 (50%), Gaps = 6/421 (1%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y   S +E  + + ++M   GL  +      +I +L D G    A  V   M   G+   
Sbjct: 295 YCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLD 354

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
              + T++  FC++G++  A     EMQ RG + +GVTY  LI G  R GEL++A  +++
Sbjct: 355 AAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQ 414

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M   GL V A +Y  +I GY + G + EA  +  +MV + V P + TY  L  GLCK G
Sbjct: 415 EMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQG 474

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            V  A     EM  K +  +I +YN+L+ G C++GN+ +A     ++    L P V TY 
Sbjct: 475 DVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYT 534

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           T+I  LC+  +L+ A  L + M+++GI P ++TY +++NG C  G +   +     ML K
Sbjct: 535 TIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEK 594

Query: 483 GLQPDRFAYTT---QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
            + P+   Y +   Q   E  +  T+E Y+    ML++   P+  TYN+L+ G CK  ++
Sbjct: 595 NIHPNTTTYNSLMKQYCIEKNMKSTTEIYK---GMLSQEVVPNENTYNILIKGHCKARNM 651

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           +EA     +M+  GF     +Y ++I    +       R LF  M ++ L+     Y   
Sbjct: 652 KEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFY 711

Query: 600 I 600
           I
Sbjct: 712 I 712



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 202/412 (49%), Gaps = 14/412 (3%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G++ +   + +++ +L + G +  A  VVE +V   MHG++           +   +   
Sbjct: 315 GLELNPVAYTSVIALLCDEGQVSDAVRVVEDMV---MHGVV-----------LDAAVFTT 360

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           ++  + +K  +      F++M + GL  D      +I  L   G   +A  V + M + G
Sbjct: 361 VMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKG 420

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           +    VTY  ++D +CK G+M EA  +  +M  +  +PN VTY  L  G  + G++  A 
Sbjct: 421 LDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAAN 480

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L+ +M   GL+++  +YN +I G  + G L +A+    +M   G+ P + TY  +I  L
Sbjct: 481 ELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGAL 540

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C+   +  A     EML K + P I++YN L+ G+C SG +     L + +  +N+ P  
Sbjct: 541 CQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNT 600

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
            TYN+L+   C   +++   ++ + M++Q ++P+  TY I++ G CK  N+  A  F +E
Sbjct: 601 TTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSE 660

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
           M+ KG +    +Y   I    K    +EA RL E+M  +    +   YN  +
Sbjct: 661 MIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYI 712



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 96/244 (39%), Gaps = 59/244 (24%)

Query: 117 QPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKIL 176
           + G+K D + + TI+  L +S  L  A+ +++                            
Sbjct: 523 EAGLKPDVYTYTTIIGALCQSKELDRAHSLLQ---------------------------- 554

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR-----EVY 231
                                +ML  G+ P +   N ++     NGF +  R      + 
Sbjct: 555 ---------------------EMLDKGIKPTIVTYNVLM-----NGFCMSGRVEGGKRLL 588

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M E  I P+  TYN+++  +C E  M+   E+   M  +   PN  TYN+LI G  + 
Sbjct: 589 EWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKA 648

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
             +++A     +M++ G +++A SYN +I   ++K    EA  L E+M    +      Y
Sbjct: 649 RNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVY 708

Query: 352 NILI 355
           N  I
Sbjct: 709 NFYI 712


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  278 bits (712), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 170/550 (30%), Positives = 273/550 (49%), Gaps = 39/550 (7%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           + D LL +     +++  +    ++ +  + P+ + CN I+  L  N    +   + R +
Sbjct: 135 VFDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARN----RQGGLVRRL 190

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
            E    P++ T+N ++D  CK+GE+ EA  L   M+  GCSP+ VTYN LI G+ + GEL
Sbjct: 191 FEHLPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGEL 250

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           E+   L+ +M K G      +YN +I  +S+ G + +A +   EM   GV   + T +  
Sbjct: 251 EEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTF 310

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           +   CK G V +A   F +M  + ++P+  +Y +L+ G C++G + +A +L DE+  + L
Sbjct: 311 VDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGL 370

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQ-----------------------------------Q 439
           VP VVTY  ++DGLC+ G + VA                                     
Sbjct: 371 VPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALD 430

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           L   M N+G+  DV  Y  ++ G CK+  L  A+   ++M   GL+P+   YTT +    
Sbjct: 431 LLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFF 490

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           K G  SEA  L  ++   G  P+++TY  L+ GLCK GS+ EA     KM   G  P+  
Sbjct: 491 KAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQ 550

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
            YT++I    ++G L +   L N M+ KG+S   V YT LI  H  +G L+ AF   ++M
Sbjct: 551 VYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKM 610

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
              G++ ++  Y   I+G C +  + +A G+  +M   GI P+K  Y  LI +    GN 
Sbjct: 611 IETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNM 670

Query: 680 QEALRLYKEM 689
           +EA  L  EM
Sbjct: 671 EEASSLQNEM 680



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 127/418 (30%), Positives = 218/418 (52%), Gaps = 1/418 (0%)

Query: 168 SSCVS-IKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
           S C + +   + L+  ++K   +E+    F +M R G++ +V   +  +      G   +
Sbjct: 263 SGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVRE 322

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A +++  M   G+ P+  TY +++D  CK G + +A+ LL EM  +G  PN VTY V++ 
Sbjct: 323 AMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVD 382

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G  + G++  A  ++  M + G+K +   Y  +I G+        AL+L  EM  +G+  
Sbjct: 383 GLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMEL 442

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
            ++ Y  LI+GLCK  ++ +A+    +M    + P+ + Y T++  + ++G   EA  L 
Sbjct: 443 DVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALL 502

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
            ++    L P VVTY  LIDGLC+ G +  A    + M   G+ P+V  YT +++G CK+
Sbjct: 503 HKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKI 562

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G+LS A    NEM+ KG+  D+  YT+ I G +K GD   A+ L+ +M+  G   DL  Y
Sbjct: 563 GSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCY 622

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM 584
              + G C +  ++EA  +L +M+G G  PD   Y  +I    ++G++     L N M
Sbjct: 623 TCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEM 680



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 108/217 (49%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           + +KM   GL P+      I+      G   +A  +   + + G++P++VTY  ++D  C
Sbjct: 466 LLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLC 525

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K G + EA+    +M+  G  PN   Y  LI GF + G L +A  L+ +M+  G+ +   
Sbjct: 526 KAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKV 585

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
            Y  +I G+ ++G L  A  L+ +M+  G+   L  Y   I G C    + +AR    EM
Sbjct: 586 VYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEM 645

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           +   + PD  +YN L+  Y + GN+ EA  L +E+ S
Sbjct: 646 IGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEMES 682


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  278 bits (711), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 157/485 (32%), Positives = 251/485 (51%), Gaps = 6/485 (1%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +++ L  FN+ML     P   + NR++  +           + R M  FGI P + T   
Sbjct: 26  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++S C    +  A   L ++   G  P+  T+  LI G    G++ +A  L   M+  G
Sbjct: 86  VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 145

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK---WGRVS 365
            + +  +Y  +I G  +   + EA N+  EM+T+G++P + TYN LI+GLCK   W  V+
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 205

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
              +   EM+   ++PD+ + NT++   C+ G + EA  + D +  R + P VVTYN L+
Sbjct: 206 TLMN---EMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALM 262

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           DG C   +++VA ++ + M+++  + +VI+Y  ++NG CK+ ++  A   F EM R+ L 
Sbjct: 263 DGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELT 322

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           P+   Y T I G   +G   +A  L  EM+A+G  PDL+TY  L   LCK   L++A  L
Sbjct: 323 PNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMAL 382

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
           L+ + G  + PD   YT+I+      G+L   RDLF+N+  KGL P + TY ++IH    
Sbjct: 383 LKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCK 442

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
           +G L  A   FSEM   G  PN  TYN +  G  R     +   L  +M   G   +  T
Sbjct: 443 QGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVST 502

Query: 666 YTILI 670
            T+L+
Sbjct: 503 TTLLV 507



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 163/555 (29%), Positives = 267/555 (48%), Gaps = 48/555 (8%)

Query: 198 KMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMGEFGIKPSIVTYNTMLDSFCKE 256
           K+L+ G  PD      +I+ L   G   +A  ++ +M+GE G +P++VTY T+++  CK+
Sbjct: 105 KILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGE-GFQPNVVTYGTLINGLCKD 163

Query: 257 GEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSY 316
            ++ EA  +  EM  +G SPN VTYN LI G  +  E +    L+ +M+   +     + 
Sbjct: 164 RQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTL 223

Query: 317 NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
           N ++    ++G++ EA ++ + M+ RGV P + TYN L+ G C    V  A   F  M+ 
Sbjct: 224 NTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVH 283

Query: 377 KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
           K+ + ++ISYNTL+ GYC+  ++ +A  LF+E+  + L P  VTYNTLI GLC  G L+ 
Sbjct: 284 KDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQD 343

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
           A  L   M+ +G +PD++TY  + +  CK  +L  A      +      PD   YTT + 
Sbjct: 344 AISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILD 403

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
           G  + G+  +A  L   + +KG  P++ TYN+++HGLCK G L EA++L  +M  +G  P
Sbjct: 404 GMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSP 463

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG--------- 607
           +  TY  I    L   +  R  +L   ML +G S  + T T+L+   +  G         
Sbjct: 464 NDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQIL 523

Query: 608 -------------------------------------RLELAFMYFSEMQVKGIRPNVIT 630
                                                 L+ A   F+ M      P+ + 
Sbjct: 524 CKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVD 583

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           +  L+  + +++       L   M+  GI P+ YT  ILIN  C+      A  +  ++L
Sbjct: 584 FTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLL 643

Query: 691 DREIEPDYCTHSALL 705
               +PD  T+  L+
Sbjct: 644 KLGFQPDVVTYGTLM 658



 Score =  258 bits (659), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 150/472 (31%), Positives = 244/472 (51%), Gaps = 1/472 (0%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PS V +N +L S  K       L L  +M   G  P+  T  ++I        ++ A   
Sbjct: 43  PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSA 102

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  +LKLG +  A ++  +I G   +G + EAL+L ++M+  G  P + TY  LI GLCK
Sbjct: 103 LAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK 162

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
             +V++A + F EM+ K + P+I++YN+L++G C+         L +E+    ++P V T
Sbjct: 163 DRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFT 222

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
            NT++D LC+ G +  A  + + MI++G+ P+V+TY  +++G C    + +A + F+ M+
Sbjct: 223 LNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMV 282

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            K    +  +Y T I G  K+    +A  L EEM  +   P+ +TYN L+HGLC +G L+
Sbjct: 283 HKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQ 342

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           +A  L  +MV  G IPD +TY ++     +   L +   L   +      P +  YT ++
Sbjct: 343 DAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTIL 402

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                 G LE A   FS +  KG++PNV TYN +I+GLC+   + +A  LF +M + G  
Sbjct: 403 DGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCS 462

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
           PN  TY ++             + L +EML R    D  T + LL+  L  D
Sbjct: 463 PNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVST-TTLLVGMLSDD 513



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 181/654 (27%), Positives = 294/654 (44%), Gaps = 88/654 (13%)

Query: 123 DEFVFCTILEILIESGLLRSAYWVVETVV-------CVNMHGILDVLIGGGLSS--CVSI 173
           D F   T+++ L + G++  A+ VV+ ++        V  + ++D   G  L +   V++
Sbjct: 219 DVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMD---GHCLRNEVDVAV 275

Query: 174 KILDLLL-------------LI--YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL 218
           K+ D ++             LI  Y K   V++ + +F +M R  L P+    N +I  L
Sbjct: 276 KVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGL 335

Query: 219 RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNG 278
              G    A  ++  M   G  P +VTY T+ D  CK   + +A+ LL  ++G    P+ 
Sbjct: 336 CHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDI 395

Query: 279 VTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
             Y  ++ G  R GELE AR L  ++   GL+ +  +YN +I G  ++GLL EA  L  E
Sbjct: 396 QIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSE 455

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY----- 393
           M   G +P   TYN++  G  +            EML +    D+ S  TLL G      
Sbjct: 456 MNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDV-STTTLLVGMLSDDG 514

Query: 394 ---------CRSGN---------------------------------IGEAFLLFDELRS 411
                    C+  +                                 + +A   F+ +  
Sbjct: 515 LDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLH 574

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
            +  P+ V +  L+  + +         L   M + GI PDV T  I++N  C +  L  
Sbjct: 575 MHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGY 634

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A     ++L+ G QPD   Y T + G  K             M+ KG  PD+ TYN L+H
Sbjct: 635 AFSVLAKLLKLGFQPDVVTYGTLMNGLCK-------------MITKGISPDIFTYNSLIH 681

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
            LC L   +    LL +MV    +P+ + +++++ A  + G +    D+ + M+++G+ P
Sbjct: 682 ALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEP 741

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
            +VTYT L+  H  R  ++ A   F  M  KG  PNV +YN LING C+++R+D+A GL 
Sbjct: 742 DVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLL 801

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             M  +G++ +  TY  LI+  C+ G  Q A+ L+ EM+     PD  T+  LL
Sbjct: 802 EQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILL 855



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 130/480 (27%), Positives = 239/480 (49%)

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           ++NT          + EAL     M  +   P+ V +N L+T  ++         L R M
Sbjct: 12  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 71

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
              G+    ++   +I        +  A +   +++  G  P   T+  LI GLC  G++
Sbjct: 72  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 131

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            +A H F +M+ +   P++++Y TL+ G C+   + EAF +F E+ ++ + P +VTYN+L
Sbjct: 132 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSL 191

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           I GLC+  + +    L   M++  I+PDV T   +V+  CK G ++ A +  + M+ +G+
Sbjct: 192 IHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGV 251

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
           +P+   Y   + G     +   A ++ + M+ K    ++I+YN L++G CK+ S+++A  
Sbjct: 252 EPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMY 311

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           L  +M      P+ +TY ++IH    +G L+    LF+ M+ +G  P LVTY  L     
Sbjct: 312 LFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLC 371

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
               L+ A      ++     P++  Y  +++G+CR   ++ A  LF ++  +G+ PN +
Sbjct: 372 KNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVW 431

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           TY I+I+  C  G   EA +L+ EM      P+ CT++ +    L  +  +  +E LE +
Sbjct: 432 TYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEM 491



 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 147/570 (25%), Positives = 257/570 (45%), Gaps = 94/570 (16%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           PD++    I+  +   G    AR+++  +   G++P++ TYN M+   CK+G + EA +L
Sbjct: 393 PDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKL 452

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
             EM   GCSPN  TYN++  GF RN E  +   L+ +ML  G  V   +   ++   S+
Sbjct: 453 FSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSD 512

Query: 326 KGL----------------------------------------------LVEALNLEEEM 339
            GL                                              L +AL+    M
Sbjct: 513 DGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRM 572

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
           +     P+   +  L+  + K    S       +M    + PD+ + N L+  +C    +
Sbjct: 573 LHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRL 632

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY--- 456
           G AF +  +L      P VVTY TL++GLC+             MI +GI PD+ TY   
Sbjct: 633 GYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK-------------MITKGISPDIFTYNSL 679

Query: 457 --------------------------------TIMVNGSCKMGNLSMAREFFNEMLRKGL 484
                                           + +V+  CK G +++A +  + M+++G+
Sbjct: 680 IHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGV 739

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
           +PD   YT  + G     +  EA ++ + M+ KG  P++ +YN+L++G C++  +++A  
Sbjct: 740 EPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMG 799

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           LL +M   G I D +TY ++IH    +G L+    LF+ M+  G  P LVTY +L+    
Sbjct: 800 LLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLC 859

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
               L  A +    ++   +  +++ YN  I+G+CR   ++ A  LF ++  +G+ P+  
Sbjct: 860 KNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVR 919

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREI 694
           TY I+I+  C  G   EA +L+++M + +I
Sbjct: 920 TYNIMIHGLCKRGLLDEANKLFRKMDENDI 949



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/425 (29%), Positives = 198/425 (46%), Gaps = 48/425 (11%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PS V +  +L S  K       L L  +M   G  P+  T N+LI  F     L  A  +
Sbjct: 579 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 638

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  +LKLG +                                   P + TY  L+ GLCK
Sbjct: 639 LAKLLKLGFQ-----------------------------------PDVVTYGTLMNGLCK 663

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
                        M+ K + PDI +YN+L++  C          L +E+ +  ++P VV 
Sbjct: 664 -------------MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVV 710

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           ++T++D LC+ G + +A  + + MI +G+ PDV+TYT +++G C    +  A + F+ M+
Sbjct: 711 FSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMV 770

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            KG  P+  +Y   I G  ++    +A  L E+M  +G   D +TYN L+HGLC +G L+
Sbjct: 771 HKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQ 830

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
            A  L  +MV  G IPD +TY  ++    +   L     L   +    L   ++ Y + I
Sbjct: 831 HAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAI 890

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                 G LE A   FS +  KG++P+V TYN +I+GLC+   +D+A  LF  M+E  I 
Sbjct: 891 DGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIW 950

Query: 661 PNKYT 665
            N  +
Sbjct: 951 SNSTS 955



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 127/282 (45%), Gaps = 43/282 (15%)

Query: 126 VFCTILEILIESGLLRSAYWVVETVV-----------CVNMHG------------ILDVL 162
           VF T+++ L + G++  A+ VV+ ++              M G            + D +
Sbjct: 710 VFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTM 769

Query: 163 IGGGLSSCV-SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDN 221
           +  G   CV +++  ++L+  Y +   +++ + +  +M   GL+ D    N +I  L   
Sbjct: 770 VHKG---CVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHV 826

Query: 222 GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY 281
           G    A  ++  M   G  P +VTY  +LD  CK   + EA+ LL  ++G     + + Y
Sbjct: 827 GRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVY 886

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
           N+ I G  R GELE AR L  ++   GL+    +YN +I G  ++GLL EA  L  +M  
Sbjct: 887 NIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDE 946

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
             +                W   + +R++   + +K ++P+I
Sbjct: 947 NDI----------------WSNSTSSRNQKSLIYQKIMLPEI 972


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  278 bits (711), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 158/489 (32%), Positives = 254/489 (51%), Gaps = 5/489 (1%)

Query: 205 LPDVKNC--NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           LP+   C  N ++K L   G   + ++ +++  E    P +VTY  M+  +C   E++ A
Sbjct: 248 LPEKNTCSYNILLKALCTAG---RIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELETA 304

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
           ++LL EM  RG   N V Y  +I      G++  A  ++ DM+  G+ + A  +  ++ G
Sbjct: 305 IKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSG 364

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
           +  KG L  A N  +EM  RG+A    TY  LI GLC+ G + +A     EM  K +  D
Sbjct: 365 FCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVD 424

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
            ++Y  L+ GYC+ G + EAFL+ +++  + + P VVTY  L DGLC+ GD+  A +L  
Sbjct: 425 AVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLH 484

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            M ++G+  ++ TY  ++NG CK GNL  A     +M   GL+PD + YTT I    +  
Sbjct: 485 EMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSK 544

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
           +   A+ L +EML KG  P ++TYNVL++G C  G +E    LL  M+     P+  TY 
Sbjct: 545 ELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYN 604

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
           S++       +++   +++  ML + + P   TY +LI  H     ++ A  + SEM  K
Sbjct: 605 SLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEK 664

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
           G R    +YNALI  L + ++  +A  LF  M +E +      Y   I+ + N  N +  
Sbjct: 665 GFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLEST 724

Query: 683 LRLYKEMLD 691
           L L  E+++
Sbjct: 725 LALCDELVE 733



 Score =  268 bits (686), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 159/470 (33%), Positives = 252/470 (53%), Gaps = 11/470 (2%)

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
           ++GI PS  + N +L   C+   + EA++L  E+  +    N  +YN+L+      G ++
Sbjct: 219 QYGISPSPESCNAVL---CRL-PLDEAVQLFQELPEK----NTCSYNILLKALCTAGRIK 270

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
            A  L  +M      V+   Y  ++ GY     L  A+ L  EM  RG+      Y  +I
Sbjct: 271 DAHQLFDEMASPPDVVT---YGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVI 327

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
             LC  G+VSDA     +M+   V+ D   + T++ G+CR G++  A   FDE++ R L 
Sbjct: 328 ALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLA 387

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
              VTY  LI+GLCR G+L+ A+++ + M ++G+  D +TYT++++G CK+G ++ A   
Sbjct: 388 ADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLV 447

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
            N+M++K + P+   YT    G  K GD   A  L  EM +KG   ++ TYN L++GLCK
Sbjct: 448 HNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCK 507

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
            G+LE+A   +  M   G  PD  TYT+II A  +  +L R   L   ML KG+ PT+VT
Sbjct: 508 AGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVT 567

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           Y VL++     GR+E        M  K I PN  TYN+L+   C  + +     ++  M 
Sbjct: 568 YNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGML 627

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            + ++PN+ TY ILI  +C A N +EAL  + EM+++       +++AL+
Sbjct: 628 SQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALI 677



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 130/421 (30%), Positives = 211/421 (50%), Gaps = 6/421 (1%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y   S +E  + + ++M   GL  +      +I +L D G    A  V   M   G+   
Sbjct: 295 YCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLD 354

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
              + T++  FC++G++  A     EMQ RG + +GVTY  LI G  R GEL++A  +++
Sbjct: 355 AAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQ 414

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M   GL V A +Y  +I GY + G + EA  +  +MV + V P + TY  L  GLCK G
Sbjct: 415 EMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQG 474

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            V  A     EM  K +  +I +YN+L+ G C++GN+ +A     ++    L P V TY 
Sbjct: 475 DVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYT 534

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           T+I  LC+  +L+ A  L + M+++GI P ++TY +++NG C  G +   +     ML K
Sbjct: 535 TIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEK 594

Query: 483 GLQPDRFAYTT---QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
            + P+   Y +   Q   E  +  T+E Y+    ML++   P+  TYN+L+ G CK  ++
Sbjct: 595 NIHPNTTTYNSLMKQYCIEKNMKSTTEIYK---GMLSQEVVPNENTYNILIKGHCKARNM 651

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           +EA     +M+  GF     +Y ++I    +       R LF  M ++ L+     Y   
Sbjct: 652 KEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFY 711

Query: 600 I 600
           I
Sbjct: 712 I 712



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 202/412 (49%), Gaps = 14/412 (3%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G++ +   + +++ +L + G +  A  VVE +V   MHG++           +   +   
Sbjct: 315 GLELNPVAYTSVIALLCDEGQVSDAVRVVEDMV---MHGVV-----------LDAAVFTT 360

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           ++  + +K  +      F++M + GL  D      +I  L   G   +A  V + M + G
Sbjct: 361 VMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKG 420

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           +    VTY  ++D +CK G+M EA  +  +M  +  +PN VTY  L  G  + G++  A 
Sbjct: 421 LDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAAN 480

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L+ +M   GL+++  +YN +I G  + G L +A+    +M   G+ P + TY  +I  L
Sbjct: 481 ELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGAL 540

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C+   +  A     EML K + P I++YN L+ G+C SG +     L + +  +N+ P  
Sbjct: 541 CQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNT 600

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
            TYN+L+   C   +++   ++ + M++Q ++P+  TY I++ G CK  N+  A  F +E
Sbjct: 601 TTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSE 660

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
           M+ KG +    +Y   I    K    +EA RL E+M  +    +   YN  +
Sbjct: 661 MIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYI 712



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 113/232 (48%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           + ++M   GL  ++   N +I  L   G   +A      M E G+KP + TY T++ + C
Sbjct: 482 LLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALC 541

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           +  E+  A  LL EM  +G  P  VTYNVL+ GF  +G +E  + L+  ML+  +  +  
Sbjct: 542 QSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTT 601

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +YN ++  Y  +  +     + + M+++ V P   TYNILI G CK   + +A +   EM
Sbjct: 602 TYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEM 661

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
           + K       SYN L+    +     EA  LF+++R   L      YN  ID
Sbjct: 662 IEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYID 713



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 114/238 (47%), Gaps = 6/238 (2%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   +EQ +     M   GL PDV     II  L  +    +A  + + M + GIKP+IV
Sbjct: 507 KAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIV 566

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TYN +++ FC  G ++    LL  M  +   PN  TYN L+  +     ++    + + M
Sbjct: 567 TYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGM 626

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           L   +  + ++YN +I G+ +   + EAL    EM+ +G   T ++YN LI  L K  + 
Sbjct: 627 LSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKF 686

Query: 365 SDARHRFFEMLRKNVI---PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
           ++AR R FE +RK  +   PD+  YN  +       N+     L DEL    LV ++ 
Sbjct: 687 TEAR-RLFEKMRKERLTAEPDV--YNFYIDLSFNEDNLESTLALCDELVEVTLVKSIA 741



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 14/201 (6%)

Query: 117 QPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKIL 176
           + G+K D + + TI+  L +S  L  A            H +L  ++  G+    +I   
Sbjct: 523 EAGLKPDVYTYTTIIGALCQSKELDRA------------HSLLQEMLDKGIKP--TIVTY 568

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           ++L+  +     VE    +   ML   + P+    N ++K            E+Y+ M  
Sbjct: 569 NVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLS 628

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
             + P+  TYN ++   CK   M+EAL    EM  +G      +YN LI   ++  +  +
Sbjct: 629 QEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTE 688

Query: 297 ARGLIRDMLKLGLKVSAHSYN 317
           AR L   M K  L      YN
Sbjct: 689 ARRLFEKMRKERLTAEPDVYN 709


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  278 bits (711), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 161/497 (32%), Positives = 261/497 (52%), Gaps = 6/497 (1%)

Query: 201 RNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQ 260
           R   LP V   + ++ +L D G    A      + E  + P+  T N +L    +E    
Sbjct: 123 RRSALPSV--VDTLLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLARE---- 176

Query: 261 EALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII 320
            + EL W +  +  +PN  T+N++I    + G+L +AR L+  M  +G      +YN +I
Sbjct: 177 RSSELAWRLFEQLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLI 236

Query: 321 CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
            GY + G L E   L  EM   G  P + TYN L+   CK+GR+  A   F EM R+ V+
Sbjct: 237 DGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVM 296

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
            ++++++T +  +C++G + EA  LF ++R + + P  VTY  L+DG C+ G L+ A  L
Sbjct: 297 ANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVL 356

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
              M+ QG+  +V+TYT++V+G CK G ++ A + F  M R G++ +   YTT I G   
Sbjct: 357 TNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFV 416

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
             ++  A  L  EM  KG   D+  Y  L+ GLC L  L+EA  LL KM   G  P+++ 
Sbjct: 417 YKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVI 476

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           YT+I+ A  +         L   M+  G  P +VTY  L+      G ++ A  +F++M 
Sbjct: 477 YTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMV 536

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
             G+ PNV  Y AL++GLC+  R+D+A  L  +M ++G+  +    T L++ +   GN Q
Sbjct: 537 DLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQ 596

Query: 681 EALRLYKEMLDREIEPD 697
           +A  L  +M++  ++ D
Sbjct: 597 DAFALKAKMINSGLQLD 613



 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 158/484 (32%), Positives = 254/484 (52%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P+V   N +I  L   G   +AR +   M   G  P +VTYN+++D + K GE++E  +L
Sbjct: 192 PNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKL 251

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           + EM+G GC P+ VTYN L+  F + G +E+A     +M + G+  +  +++  +  + +
Sbjct: 252 VGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCK 311

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
            G++ EA+ L  +M  +G+ P   TY  L+ G CK GR+ DA     EM+++ V  ++++
Sbjct: 312 NGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVT 371

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           Y  L+ G C+ G + EA  +F  +    +    + Y TLI G   Y + E A  L   M 
Sbjct: 372 YTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMK 431

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
           ++G+  DV  Y  ++ G C +  L  A+   N+M   GL+P+   YT  +    K    S
Sbjct: 432 DKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKES 491

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           EA  L ++M+  GF P+++TY  LV GLCK GS++EA     KMV  G  P+   YT+++
Sbjct: 492 EAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALV 551

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
               + G L +   L + M+ KG+S   V  T L+  H  +G L+ AF   ++M   G++
Sbjct: 552 DGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQ 611

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
            ++  Y   + G C L  I +A  +  +M E GI P+   Y  LIN+    GN +EA  L
Sbjct: 612 LDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAIL 671

Query: 686 YKEM 689
             EM
Sbjct: 672 QNEM 675



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 8/221 (3%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK----AREVYRMMGEFGIKPSIVTYNTML 250
           + NKM   GL P+    N I   + D  F  +    A  + + M + G +P+IVTY  ++
Sbjct: 461 LLNKMDECGLKPN----NVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALV 516

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
           D  CK G + EA+    +M   G  PN   Y  L+ G  +NG L++A  L+ +M+  G+ 
Sbjct: 517 DGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMS 576

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
           +       ++ G+ ++G L +A  L+ +M+  G+   L  Y   ++G C    + +AR  
Sbjct: 577 LDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREV 636

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
             EM+   + PD + YN L+    + GN+ EA +L +E+ S
Sbjct: 637 LSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEMES 677



 Score = 47.4 bits (111), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 57/123 (46%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   +++ +L+ ++M+  G+  D   C  ++      G    A  +   M   G++  + 
Sbjct: 556 KNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLY 615

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
            Y   +  FC    +QEA E+L EM   G +P+ V YN LI    + G +E+A  L  +M
Sbjct: 616 GYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEM 675

Query: 305 LKL 307
             L
Sbjct: 676 ESL 678


>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Cucumis sativus]
          Length = 822

 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 181/657 (27%), Positives = 303/657 (46%), Gaps = 52/657 (7%)

Query: 100 IREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGI- 158
           ++  P   L FF +       +     +CT++ +LI S  +  A  ++  ++  N+  + 
Sbjct: 85  LKANPMTCLNFFYFASNSFKFRFTIHSYCTLILLLIRSKFIPPARLLLIRLIDGNLPVLN 144

Query: 159 -----LDVLIGGGLSSCVSI-------KILDLLLLIYTK--KSMVEQCLL-VFNKMLRNG 203
                  + I   L    S+       +  DLL+ +Y+   +++   C + VF  + R G
Sbjct: 145 LDSEKFHIEIANALFGLTSVVGRFEWTQAFDLLIHVYSTQFRNLGFSCAVDVFYLLARKG 204

Query: 204 LLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEAL 263
             P +K CN ++  L       K  EV+R+M E G  P + ++  ++++ CK G+M+ A+
Sbjct: 205 TFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSE-GACPDVFSFTNVINALCKGGKMENAI 263

Query: 264 ELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGY 323
           EL  +M+  G SPN VTYN +I G  +NG L+ A  L   M   G++ +  +Y  +I G 
Sbjct: 264 ELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGL 323

Query: 324 SEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
            +     +  ++ +EM+  G  P +  +N LI G CK G +  A      M+ KN+ P  
Sbjct: 324 IKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTS 383

Query: 384 ISYNTLLYGYCRSGNI-----------------------------------GEAFLLFDE 408
           ++  +L+ G+C+S  I                                     AF     
Sbjct: 384 VTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKM 443

Query: 409 LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
           + SRN  P+ +    L+ GLC+ G    A +L   ++ +G     +T   +++G C  G 
Sbjct: 444 MLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGK 503

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
           L  A     EML +GL  DR  Y   I G    G     +RL+EEM  +G  PD+ TYN 
Sbjct: 504 LPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNF 563

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           L+ GLC +G L++A +L  +    G I +  TY  ++    +   +    +LFN +L K 
Sbjct: 564 LLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKK 623

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
           +    + Y ++I AH   G +  A      M+ KGI PN  TY++LI+G+C +  ++ A 
Sbjct: 624 MELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAK 683

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            L  +M +EG +PN   YT LI   C  G    A   + EM+   I P+  T++ ++
Sbjct: 684 HLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMI 740



 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 149/509 (29%), Positives = 255/509 (50%), Gaps = 35/509 (6%)

Query: 198 KMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG 257
           KM   G+ P++K    +I  L    F  K   V   M   G  P++V +N ++D +CK G
Sbjct: 303 KMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMG 362

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS----- 312
            ++ AL++   M  +  +P  VT   L+ GF ++ ++E A   + ++L  GL +      
Sbjct: 363 NIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCY 422

Query: 313 -----------------------AHSYNP-------IICGYSEKGLLVEALNLEEEMVTR 342
                                  + ++ P       ++CG  + G  +EA  L   ++ +
Sbjct: 423 SVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEK 482

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           G   +  T N LI+GLC  G++ +A     EML + +  D I+YN L+ G+C  G +   
Sbjct: 483 GSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGC 542

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
           F L +E+  R + P + TYN L+ GLC  G L+ A +L +     G++ ++ TY IM+ G
Sbjct: 543 FRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEG 602

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            CK   +      FNE+L K ++ +   Y   I    + G+ + A +L E M +KG  P+
Sbjct: 603 YCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPN 662

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
             TY+ L+HG+C +G +E+A  L+ +M  +GF+P+ + YT++I    ++G +      + 
Sbjct: 663 CATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWL 722

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
            M+   + P   TYTV+I  +   G +E A     +M+  GI P+V+TYN L NG C+  
Sbjct: 723 EMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKAN 782

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILIN 671
            +D A+ +   M  EG+  ++ TYT L++
Sbjct: 783 DMDNAFKVCDQMATEGLPVDEITYTTLVH 811



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 140/445 (31%), Positives = 232/445 (52%), Gaps = 2/445 (0%)

Query: 158 ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
           I DV+I   ++   S+ +  L+   + K   +E       ++L +GL     NC  ++  
Sbjct: 370 IKDVMISKNITP-TSVTLYSLMQ-GFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHW 427

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
           L        A    +MM     +PS +    ++   CK+G+  EA EL + +  +G   +
Sbjct: 428 LCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPAS 487

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
            VT N LI G    G+L +A  ++++ML+ GL +   +YN +I G+  +G +     L E
Sbjct: 488 KVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLRE 547

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
           EM  RG+ P + TYN L+ GLC  G++ DA   + E     +I +I +Y  ++ GYC++ 
Sbjct: 548 EMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKAN 607

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
            I +   LF+EL S+ +    + YN +I   C+ G++  A QL ENM ++GILP+  TY+
Sbjct: 608 RIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYS 667

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
            +++G C +G +  A+   +EM ++G  P+   YT  I G  KLG    A     EM++ 
Sbjct: 668 SLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISF 727

Query: 518 GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
              P+  TY V++ G CKLG++E+AN LL KM   G +PD +TY  + +   +  D+   
Sbjct: 728 NIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNA 787

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIHA 602
             + + M  +GL    +TYT L+H 
Sbjct: 788 FKVCDQMATEGLPVDEITYTTLVHG 812



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 138/510 (27%), Positives = 241/510 (47%), Gaps = 43/510 (8%)

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
            R+ GFS  A +V+ ++   G  PS+ T N +L S  K  E ++  E+ + +   G  P+
Sbjct: 185 FRNLGFSC-AVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEV-FRVMSEGACPD 242

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
             ++  +I    + G++E A  L   M KL                              
Sbjct: 243 VFSFTNVINALCKGGKMENAIELFMKMEKL------------------------------ 272

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
                G++P + TYN +I GLC+ GR+ +A     +M  K V P++ +Y  L+ G  +  
Sbjct: 273 -----GISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLN 327

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
              +   + DE+      P VV +N LIDG C+ G++E A ++K+ MI++ I P  +T  
Sbjct: 328 FFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLY 387

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGL--QPDR-FAYTTQIAGELKLGDTSEAYRLQEEM 514
            ++ G CK   +  A     E+L  GL   PD  ++    +  + +      A+R  + M
Sbjct: 388 SLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRY---HSAFRFTKMM 444

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
           L++ F P  +   +LV GLCK G   EA EL  +++  G     +T  ++IH     G L
Sbjct: 445 LSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKL 504

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
                +   ML +GL    +TY  LI      G++E  F    EM  +GI+P++ TYN L
Sbjct: 505 PEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFL 564

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           + GLC + ++D A  L+ + +  G++ N +TY I++   C A   ++   L+ E+L +++
Sbjct: 565 LRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKM 624

Query: 695 EPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           E +   ++ ++           A++ LE++
Sbjct: 625 ELNSIVYNIIIKAHCQNGNVAAALQLLENM 654



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 129/478 (26%), Positives = 227/478 (47%), Gaps = 35/478 (7%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V ++M+ +G  P+V   N +I      G    A ++  +M    I P+ VT  +++  FC
Sbjct: 335 VLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFC 394

Query: 255 KEGEMQEALELLWEMQGRGCS-----------------------------------PNGV 279
           K  +++ A   L E+   G S                                   P+ +
Sbjct: 395 KSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDL 454

Query: 280 TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
              +L+ G  ++G+  +A  L   +L+ G   S  + N +I G    G L EA  + +EM
Sbjct: 455 LLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEM 514

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
           + RG+     TYN LI G C  G+V        EM ++ + PDI +YN LL G C  G +
Sbjct: 515 LERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKL 574

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
            +A  L+DE ++  L+  + TY  +++G C+   +E  + L   ++++ +  + I Y I+
Sbjct: 575 DDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNII 634

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           +   C+ GN++ A +    M  KG+ P+   Y++ I G   +G   +A  L +EM  +GF
Sbjct: 635 IKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGF 694

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
            P+++ Y  L+ G CKLG ++ A     +M+     P+  TYT +I    ++G++ +  +
Sbjct: 695 VPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANN 754

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
           L   M   G+ P +VTY VL +       ++ AF    +M  +G+  + ITY  L++G
Sbjct: 755 LLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 812



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 132/278 (47%), Gaps = 14/278 (5%)

Query: 116 TQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKI 175
           T+ G++ D + +  +L  L   G L  A              + D     GL S  +I  
Sbjct: 550 TKRGIQPDIYTYNFLLRGLCNVGKLDDAI------------KLWDEFKASGLIS--NIHT 595

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
             +++  Y K + +E    +FN++L   +  +    N IIK    NG    A ++   M 
Sbjct: 596 YGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMK 655

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
             GI P+  TY++++   C  G +++A  L+ EM+  G  PN V Y  LI G+ + G+++
Sbjct: 656 SKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMD 715

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
            A     +M+   +  +  +Y  +I GY + G + +A NL  +M   G+ P + TYN+L 
Sbjct: 716 TAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLT 775

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
            G CK   + +A     +M  + +  D I+Y TL++G+
Sbjct: 776 NGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 813



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 69/137 (50%)

Query: 188 MVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
           +VE    + ++M + G +P+V     +I      G    A   +  M  F I P+  TY 
Sbjct: 678 LVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYT 737

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
            M+D +CK G M++A  LL +M+  G  P+ VTYNVL  GF +  +++ A  +   M   
Sbjct: 738 VMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATE 797

Query: 308 GLKVSAHSYNPIICGYS 324
           GL V   +Y  ++ G++
Sbjct: 798 GLPVDEITYTTLVHGWN 814


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 165/555 (29%), Positives = 277/555 (49%), Gaps = 3/555 (0%)

Query: 159 LDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL 218
           LD+L   GL   + +     LL+  ++  M    +  +++ML  G+ P++   N +I  L
Sbjct: 168 LDMLSQSGLR--MGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINAL 225

Query: 219 RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNG 278
             +G    A  + + + E  + P   TY +M+   C++ ++  AL++  +M   GC PN 
Sbjct: 226 CKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNT 285

Query: 279 VTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
           VTY+ LI G   +G + +A  LIR+M+  G+  +AH+    I    + G   +A  L  +
Sbjct: 286 VTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVD 345

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
           M  +G  P + TY  LI GLC  G +  A   F  M R  V P+ ++YN L+     +  
Sbjct: 346 MKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR 405

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           I  AF++ + +      P +VTYN +I G C  GD + A  +  NM+ +G   +++TY  
Sbjct: 406 IKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNT 465

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           ++ G C  GN + A    + M   G +PD ++YT  I G  K+     A+ L  EM+  G
Sbjct: 466 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 525

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
             P+ +TY  L+ G CK   L+ A  LL  M   G  P+  TY  +IH   +  +     
Sbjct: 526 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAE 585

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           +L   M+ +G+ P +VTYT +I      G   LA   F++M  +G  PN++TY++LI  L
Sbjct: 586 ELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 645

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
            +  ++++A  LF ++E  G++P++ TY  +I     +G  + A      M+    +P  
Sbjct: 646 GQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTL 705

Query: 699 CTHSALLLKQLDKDY 713
            T+  +L+K L  +Y
Sbjct: 706 WTY-GVLIKGLKNEY 719



 Score =  255 bits (651), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 156/500 (31%), Positives = 244/500 (48%)

Query: 222 GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY 281
           G +    + Y  M   G++P+++ YN ++++ CK+G + +A  ++ ++     SP+  TY
Sbjct: 194 GMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTY 253

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
             +I G  R  +L+ A  +   M K G + +  +Y+ +I G  + G + EA +L  EM+ 
Sbjct: 254 TSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMIL 313

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
            G+ PT  T    I  LC  G   DA   F +M  K   P++ +Y  L+ G C SG +  
Sbjct: 314 HGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKV 373

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           A  LF  +    + P  VTYN LI+ L     ++ A  +   M   G  P+++TY  M+ 
Sbjct: 374 AIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIK 433

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
           G C +G+   A    N ML++G   +   Y T I G    G+T+ A R+ + M   G  P
Sbjct: 434 GYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKP 493

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           D  +Y  L+ G CK+  +E A  L  +MV DG  P+ +TYT++I    +   L     L 
Sbjct: 494 DEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLL 553

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
            +M R G  P + TY VLIH    +     A      M  +GI PNV+TY A+I+GLC+ 
Sbjct: 554 EHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKN 613

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
                A  +F  M E+G LPN  TY+ LI      G  +EA  L+ E+    + PD  T+
Sbjct: 614 GSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITY 673

Query: 702 SALLLKQLDKDYKVHAVEYL 721
             ++   +      HA  +L
Sbjct: 674 VKMIEAYIMSGKVEHAFNFL 693



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 181/642 (28%), Positives = 291/642 (45%), Gaps = 43/642 (6%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           AL+ F  +  + G + +   + T++  L +SG +  A+ ++  ++   +HGIL       
Sbjct: 269 ALQVFNQMAKE-GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI---LHGILPTA---- 320

Query: 167 LSSCVS--IKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS 224
             +C    I + D+           E    +F  M   G  P+V     +I  L  +G  
Sbjct: 321 -HTCTGPIIALCDM--------GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLL 371

Query: 225 VKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVL 284
             A  ++  M   G+ P+ VTYN +++   +   ++ A  +L  M   GCSPN VTYN +
Sbjct: 372 KVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEM 431

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           I G+   G+ ++A  ++ +ML+ G   +  +YN II GY + G    AL + + M   G 
Sbjct: 432 IKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGC 491

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
            P   +Y  LI G CK  ++  A   F EM+   + P+ ++Y  L+ GYC+   +  A  
Sbjct: 492 KPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATS 551

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
           L + ++     P V TYN LI GL +  +   A++L + MI +GI P+V+TYT M++G C
Sbjct: 552 LLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLC 611

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
           K G+ S+A E FN+M+ +G  P+   Y++ I    + G   EA  L  E+   G  PD I
Sbjct: 612 KNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEI 671

Query: 525 TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA----------------- 567
           TY  ++      G +E A   L +M+  G  P   TY  +I                   
Sbjct: 672 TYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPD 731

Query: 568 ---SLEMGDLRRGRDLFNNMLRK--GLSPTLVTYT--VLIHAHAARGRLELAFMYFSEMQ 620
              +   G     +D  + M  K   L P L       L+   +  GR   A      M 
Sbjct: 732 VVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMI 791

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
            +G+ P+   YN+L+  L R+R +D A G+F  M  +G   +   Y  LI   C     +
Sbjct: 792 SQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRK 851

Query: 681 EALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLE 722
           EA   ++ ML R   PD    + L+   L   YK   +E+L 
Sbjct: 852 EARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLH 893



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 156/324 (48%)

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
             D L    L   +  Y+ L+  L R G           M+++G+ P+++ Y  ++N  C
Sbjct: 167 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 226

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
           K GN++ A     ++    + PD F YT+ I G  +  D   A ++  +M  +G  P+ +
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 286

Query: 525 TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM 584
           TY+ L++GLC  G + EA +L+R+M+  G +P   T T  I A  +MG       LF +M
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 346

Query: 585 LRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRI 644
             KG  P + TYT LI      G L++A   F  M   G+ PN +TYNALIN L   RRI
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRI 406

Query: 645 DQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
             A+ +   M   G  PN  TY  +I   C  G+ ++A+ +   ML R    +  T++ +
Sbjct: 407 KYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTI 466

Query: 705 LLKQLDKDYKVHAVEYLESLTLGA 728
           +    D      A+  L+ +  G 
Sbjct: 467 IKGYCDSGNTTSALRILDLMRDGG 490



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 202/445 (45%), Gaps = 27/445 (6%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G K DE+ +  ++    +   + SA+            G+ + ++  GL  C +      
Sbjct: 490 GCKPDEWSYTELICGFCKISKMESAF------------GLFNEMVDDGL--CPNEVTYTA 535

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEF 237
           L+  Y K   ++    +   M R+G  P+V+  N +I  L + N FS  A E+ ++M E 
Sbjct: 536 LIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFS-GAEELCKVMIEE 594

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           GI P++VTY  M+D  CK G    ALE+  +M  +GC PN +TY+ LI    + G++E+A
Sbjct: 595 GIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEA 654

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L  ++ + GL     +Y  +I  Y   G +  A N    M+  G  PTL TY +LI G
Sbjct: 655 ENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG 714

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           L     ++D         R   +PD++   +  +GY ++ +     ++  +L   +   +
Sbjct: 715 LKNEYLLADQ--------RLAALPDVVPNCS--FGY-QTTDQDAVSVMSAKLAELDPGLS 763

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           V   N L+  L   G    A +L  +MI+QG+ PD   Y  ++    ++ N+ +A   F 
Sbjct: 764 VQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFK 823

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            M  +G +     Y   I    +L    EA    E ML + + PD +   VL+ GL + G
Sbjct: 824 HMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDG 883

Query: 538 SLEEANELLRKMVGDGFIPDHITYT 562
             +   E L  M    ++P    YT
Sbjct: 884 YKDLCMEFLHIMETRRYMPSFHIYT 908



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 121/297 (40%), Gaps = 24/297 (8%)

Query: 193 LLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDS 252
           L +FNKM+  G LP++   + +I+ L   G   +A  ++  +   G+ P  +TY  M+++
Sbjct: 620 LEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEA 679

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR-GLIRDML------ 305
           +   G+++ A   L  M   GC P   TY VLI G      L   R   + D++      
Sbjct: 680 YIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFG 739

Query: 306 -----------------KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
                            +L   +S    N ++   S  G   EA  L   M+++G+ P  
Sbjct: 740 YQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQ 799

Query: 349 ATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDE 408
             YN L+  L +   V  A   F  M  +     +  Y  L+   C+     EA + F+ 
Sbjct: 800 EAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFEN 859

Query: 409 LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
           +  R   P  V    LIDGL R G  ++  +    M  +  +P    YTI+   + K
Sbjct: 860 MLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASK 916



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 69/133 (51%), Gaps = 2/133 (1%)

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM-YFSEMQVKGIRPNVITYN 632
           + R     + + + GL   L  Y+ L+  H +R  +  A M  +  M  +G++PN++ YN
Sbjct: 161 MARTMSFLDMLSQSGLRMGLFAYSALL-IHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYN 219

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
           A+IN LC+   +  A  +   + E  + P+ +TYT +I  +C   +   AL+++ +M   
Sbjct: 220 AVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKE 279

Query: 693 EIEPDYCTHSALL 705
             EP+  T+S L+
Sbjct: 280 GCEPNTVTYSTLI 292


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 157/489 (32%), Positives = 254/489 (51%), Gaps = 5/489 (1%)

Query: 205 LPDVKNC--NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           LP+   C  N ++K L   G   + ++ +++  E    P +VTY  M+  +C   E++ A
Sbjct: 248 LPEKNTCSYNILLKALCTAG---RIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELETA 304

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
           ++LL EM  RG   N V Y  +I      G++  A  ++ DM+  G+ + A  +  ++ G
Sbjct: 305 IKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSG 364

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
           +  KG L  A N  +EM  RG+A    TY  LI GLC+ G + +A     EM  K +  D
Sbjct: 365 FCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVD 424

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
            ++Y  L+ GYC+ G + EAFL+ +++  + + P VVTY  L DGLC+ GD+  A +L  
Sbjct: 425 AVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLH 484

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            M ++G+  ++ TY  ++NG CK GNL  A     +M   GL+PD + YTT I    +  
Sbjct: 485 EMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSK 544

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
           +   A+ L +EML KG  P ++TYNVL++G C  G +E    LL  M+     P+  TY 
Sbjct: 545 ELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYN 604

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
           S++       +++   +++  ML + + P   TY +LI  H     ++ A  + SEM  K
Sbjct: 605 SLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEK 664

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
           G R    +YNALI  L + ++  +A  LF  M ++ +      Y   I+ + N  N +  
Sbjct: 665 GFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLEST 724

Query: 683 LRLYKEMLD 691
           L L  E+++
Sbjct: 725 LALCDELVE 733



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 130/421 (30%), Positives = 210/421 (49%), Gaps = 6/421 (1%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y   S +E  + + ++M   GL  +      +I +L D G    A  V   M   G+   
Sbjct: 295 YCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLD 354

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
              + T++  FC++G++  A     EMQ RG + +GVTY  LI G  R GEL++A  +++
Sbjct: 355 AAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQ 414

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M   GL V A +Y  +I GY + G + EA  +  +MV + V P + TY  L  GLCK G
Sbjct: 415 EMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQG 474

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            V  A     EM  K +  +I +YN+L+ G C++GN+ +A     ++    L P V TY 
Sbjct: 475 DVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYT 534

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           T+I  LC+  +L+ A  L + M+++GI P ++TY +++NG C  G +   +     ML K
Sbjct: 535 TIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEK 594

Query: 483 GLQPDRFAYTT---QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
            + P+   Y +   Q   E  +  T+E Y+    ML++   P+  TYN+L+ G CK  ++
Sbjct: 595 NIHPNTTTYNSLMKQYCIEKNMKSTTEIYK---GMLSQEVVPNENTYNILIKGHCKARNM 651

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           +EA     +M+  GF     +Y ++I    +       R LF  M +  L+     Y   
Sbjct: 652 KEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFY 711

Query: 600 I 600
           I
Sbjct: 712 I 712



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 201/412 (48%), Gaps = 14/412 (3%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G++ +   + +++ +L + G +  A  VVE +V   MHG++           +   +   
Sbjct: 315 GLELNPVAYTSVIALLCDEGQVSDAVRVVEDMV---MHGVV-----------LDAAVFTT 360

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           ++  + +K  +      F++M + GL  D      +I  L   G   +A  V + M + G
Sbjct: 361 VMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKG 420

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           +    VTY  ++D +CK G+M EA  +  +M  +  +PN VTY  L  G  + G++  A 
Sbjct: 421 LDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAAN 480

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L+ +M   GL+++  +YN +I G  + G L +A+    +M   G+ P + TY  +I  L
Sbjct: 481 ELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGAL 540

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C+   +  A     EML K + P I++YN L+ G+C SG +     L + +  +N+ P  
Sbjct: 541 CQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNT 600

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
            TYN+L+   C   +++   ++ + M++Q ++P+  TY I++ G CK  N+  A  F +E
Sbjct: 601 TTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSE 660

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
           M+ KG +    +Y   I    K    +EA RL E+M       +   YN  +
Sbjct: 661 MIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYI 712



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 96/244 (39%), Gaps = 59/244 (24%)

Query: 117 QPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKIL 176
           + G+K D + + TI+  L +S  L  A+ +++                            
Sbjct: 523 EAGLKPDVYTYTTIIGALCQSKELDRAHSLLQ---------------------------- 554

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR-----EVY 231
                                +ML  G+ P +   N ++     NGF +  R      + 
Sbjct: 555 ---------------------EMLDKGIKPTIVTYNVLM-----NGFCMSGRVEGGKRLL 588

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M E  I P+  TYN+++  +C E  M+   E+   M  +   PN  TYN+LI G  + 
Sbjct: 589 EWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKA 648

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
             +++A     +M++ G +++A SYN +I   ++K    EA  L E+M    +      Y
Sbjct: 649 RNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVY 708

Query: 352 NILI 355
           N  I
Sbjct: 709 NFYI 712


>gi|255546727|ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546418|gb|EEF47918.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 809

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 197/768 (25%), Positives = 351/768 (45%), Gaps = 133/768 (17%)

Query: 79  VSDHFQAVVSD------PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILE 132
           ++ H+Q  V++         +V  LN +R +P +A  +F  ++ + G   D + +  I+ 
Sbjct: 42  INTHYQNPVTNHLFEINTAKVVITLNNLRNEPSLAFSYFNQLK-ESGYSHDPYTYAAIVR 100

Query: 133 ILIESGLLRSAYWVVETVVCVNMH---GILDVL--IGGGLSS---CVSIKILDLLLLIYT 184
           IL   G  R    ++  ++  + +   GI+++   +G G+++    V +++ D L+ +  
Sbjct: 101 ILCFWGWSRKLDSILMEIIKKDGNLDFGIVNLFEALGDGIANESFSVLVQVSDALIKVCV 160

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
              M +Q   V  +    G  P + +CN ++  L ++     A  +YR +  FG+ P+  
Sbjct: 161 ASGMFDQAFDVLLQTKHCGFAPQILSCNFLMNRLVESRKVDMAIAIYRQLKAFGLNPNDY 220

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYN---------------------- 282
           TY   +  FC++G + EA+++  +M+  G +PN  +Y                       
Sbjct: 221 TYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDV 280

Query: 283 -------------VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLL 329
                        V+I GF    +L++A  ++R+M K G     + Y  +I GY   G L
Sbjct: 281 INAKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNL 340

Query: 330 VEALNLEEEMVTRGVAPTL-----------------------------------ATYNIL 354
           ++AL L +EMV++GV                                       A YN++
Sbjct: 341 LKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVV 400

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           +  LCK G+V +A     EM  K ++PDII+Y T++ GY   G + +A  ++ E++    
Sbjct: 401 MDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGH 460

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P +VTYN L  G  R G  + A  L   M  QG+ PD +T+ +++ G C  G +  A+ 
Sbjct: 461 KPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQA 520

Query: 475 FFNEMLRKGLQP---------------DRFAYTTQIAGELKL----------------GD 503
           FF+ +  K L+                  FA   +++ + ++                GD
Sbjct: 521 FFDNLEEKCLENYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGD 580

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
           + +A  L E M+A    P +I Y+ ++  L + G +E+A  +   +V  G  PD ITYT 
Sbjct: 581 SEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTI 640

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH---------------AHAARGR 608
           +I+    M  ++    +  +M  +G+ P ++TYTVL++               A  ++  
Sbjct: 641 MINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNCSKIDLRSSSSSLDAMKSKEN 700

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           +      +SEM+   I+P+VI Y  LI+  C+   I  A  LF +M + G+ P+  TYT 
Sbjct: 701 MMDPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPDTVTYTA 760

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVH 716
           L++  CN GN ++A+ L+ EML++ I PD   H+  +L  + K  KVH
Sbjct: 761 LLSGYCNVGNIKKAVVLFDEMLNKGIRPD--AHTMSVLHCILKVRKVH 806


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 150/531 (28%), Positives = 285/531 (53%), Gaps = 3/531 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
           ++  + +F +M+++   P +   ++++  + + N F V    +   M   G+  +  TY+
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDV-VISLGEQMQNLGMPHNHYTYS 120

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
            +++ FC+  ++  AL +L +M   G  PN VT + L+ G+  +  + +A  L+  M   
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           G + +  ++N +I G        EA+ L + MV +G  P L TY +++ GLCK G    A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
                +M +  + P ++ Y T++ G C++ ++ +A  LF E+ ++ + P VVTY++LI  
Sbjct: 241 FILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           LC YG    A +L  +MI + I PDV T++ +++   K G L  A + ++EM+++ + P 
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              Y++ I G        EA ++ E M++K   PD+++Y+ L+ G CK   ++E  EL R
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFR 420

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
           +M   G + + +TYT++I    + GD    +++F  M+  G+ P ++TY  L+      G
Sbjct: 421 EMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
           +LE A + F  +Q   + P + TYN +I G+C+  +++  + LF ++  +G+ P+   Y 
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 540

Query: 668 ILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQL-DKDYKVHA 717
            +I+  C  G+ +EA  L+KEM +    P+   ++ L+  +L D D +  A
Sbjct: 541 TMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA 591



 Score =  272 bits (696), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 156/499 (31%), Positives = 265/499 (53%), Gaps = 10/499 (2%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGF--SVKAREVYRMMG 235
           +L+  + ++S +   L V  KM++ G  P++   + ++     NG+  S +  E   ++ 
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLL-----NGYCHSKRISEAVALVD 175

Query: 236 EF---GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
           +    G +P+ VT+NT++       +  EA+ L+  M  +GC P+ VTY V++ G  + G
Sbjct: 176 QMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRG 235

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
           + + A  L+  M +  L+     Y  II G  +   + +ALNL +EM T+G+ P + TY+
Sbjct: 236 DTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYS 295

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
            LI  LC +GR SDA     +M+ + + PD+ +++ L+  + + G + EA  L+DE+  R
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
           ++ P++VTY++LI+G C +  L+ A+Q+ E M+++   PDV++Y+ ++ G CK   +   
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEG 415

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
            E F EM ++GL  +   YTT I G  + GD   A  + +EM++ G PP+++TYN L+ G
Sbjct: 416 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           LCK G LE+A  +   +      P   TY  +I    + G +  G DLF N+  KG+ P 
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
           +V Y  +I     +G  E A   F EM+  G  PN   YN LI    R    + +  L  
Sbjct: 536 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIK 595

Query: 653 DMEEEGILPNKYTYTILIN 671
           +M   G   +  T  ++ N
Sbjct: 596 EMRSCGFAGDASTIGLVTN 614



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 136/422 (32%), Positives = 225/422 (53%), Gaps = 4/422 (0%)

Query: 288 FSRNG----ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG 343
            SRNG    +L+ A  L  +M+K     S   ++ ++   ++       ++L E+M   G
Sbjct: 52  LSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG 111

Query: 344 VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF 403
           +     TY+ILI   C+  ++  A     +M++    P+I++ ++LL GYC S  I EA 
Sbjct: 112 MPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAV 171

Query: 404 LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
            L D++      P  VT+NTLI GL  +     A  L + M+ +G  PD++TY ++VNG 
Sbjct: 172 ALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGL 231

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
           CK G+  +A    N+M +  L+P    YTT I G  K     +A  L +EM  KG  P++
Sbjct: 232 CKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNV 291

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
           +TY+ L+  LC  G   +A+ LL  M+     PD  T++++I A ++ G L     L++ 
Sbjct: 292 VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 351

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           M+++ + P++VTY+ LI+      RL+ A   F  M  K   P+V++Y+ LI G C+ +R
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKR 411

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSA 703
           +D+   LF +M + G++ N  TYT LI     AG+   A  ++KEM+   + P+  T++ 
Sbjct: 412 VDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 471

Query: 704 LL 705
           LL
Sbjct: 472 LL 473



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 139/528 (26%), Positives = 247/528 (46%), Gaps = 76/528 (14%)

Query: 218 LRDNGFS-VKAREVYRMMGEFGIK----PSIVTYNTMLDSFCKEGEMQEALELLWEMQGR 272
           L  NG S +K  +   + GE  +K    PSI+ ++ +L +  K  +    + L  +MQ  
Sbjct: 52  LSRNGLSELKLDDAVALFGEM-VKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNL 110

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA 332
           G   N  TY++LI  F R  +L  A  ++  M+KLG +                      
Sbjct: 111 GMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYE---------------------- 148

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
                        P + T + L+ G C   R+S+A     +M      P+ +++NTL++G
Sbjct: 149 -------------PNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHG 195

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA-------QQLK---- 441
                   EA  L D + ++   P +VTY  +++GLC+ GD ++A       +Q K    
Sbjct: 196 LFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPG 255

Query: 442 ------------------------ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
                                   + M  +GI P+V+TY+ +++  C  G  S A    +
Sbjct: 256 VLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 315

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           +M+ + + PD F ++  I   +K G   EA +L +EM+ +   P ++TY+ L++G C   
Sbjct: 316 DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 375

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            L+EA ++   MV     PD ++Y+++I    +   +  G +LF  M ++GL    VTYT
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
            LI      G  ++A   F EM   G+ PN++TYN L++GLC+  ++++A  +F  ++  
Sbjct: 436 TLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 495

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            + P  YTY I+I   C AG  ++   L+  +  + ++PD   ++ ++
Sbjct: 496 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMI 543


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 167/560 (29%), Positives = 279/560 (49%), Gaps = 36/560 (6%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRM-MGE 236
           +L+  + +   +E     F  +L+ G   +V   ++++K L D     +A ++  + M E
Sbjct: 95  ILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRMSE 154

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
           FG  P +V YNT+++ F +EG++++A  L  EM  +G  PN VTY  +I G  +   +++
Sbjct: 155 FGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDR 214

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A+G+ + M+  G+K    +YN +I GY   G   E + + EEM T G+ P   TY +L+ 
Sbjct: 215 AKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLD 274

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN------------------ 398
            LCK GR  +AR  F  M RK + PD+  Y  LL+GY   G                   
Sbjct: 275 YLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSP 334

Query: 399 -----------------IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
                            I EA  +F+++R + L P VV++  LID LC+ G ++ A    
Sbjct: 335 NRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQF 394

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
             MIN+G+ P++  ++ +V G C +G    A E F E+L +G+  D   + T +      
Sbjct: 395 NQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNE 454

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
           G   EA RL + M+  G  P++I+YN LV G C  G ++EA +LL  MV +G  P+  TY
Sbjct: 455 GRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTY 514

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
           T ++    +   +     LF  ML KG++P + TY  ++H     GR   A   +  M  
Sbjct: 515 TILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMIN 574

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
              + ++ TYN ++NGLC+   +D+A+ +F  +  +    +  T+ I+I      G  ++
Sbjct: 575 SRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKED 634

Query: 682 ALRLYKEMLDREIEPDYCTH 701
           A+ L+  +    + PD  T+
Sbjct: 635 AMDLFATISAYGLVPDVVTY 654



 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 164/537 (30%), Positives = 271/537 (50%), Gaps = 8/537 (1%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF---GIKP 241
           K  +V++   VF +M+  G+ PD    N +I      G   K +EV +M+ E    G++P
Sbjct: 208 KAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTG---KWKEVVQMLEEMSTHGLEP 264

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
             +TY  +LD  CK G  +EA      M  +G  P+   Y +L+ G++  G L +    +
Sbjct: 265 DCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFL 324

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
             M+  G+  +   +N + C Y++K ++ EA+++  +M  +G++P + ++  LI  LCK 
Sbjct: 325 DLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKL 384

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           GRV DA  +F +M+ + V P+I  +++L+YG C  G   +A  LF E+  + +    V +
Sbjct: 385 GRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFF 444

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           NTL+  LC  G +  AQ+L + MI  G+ P+VI+Y  +V G C  G +  A +  + M+ 
Sbjct: 445 NTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVS 504

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
            GL+P+ F YT  + G  K     +AY L  EML KG  P + TYN ++HGL + G   E
Sbjct: 505 NGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSE 564

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           ANEL   M+      D  TY  I++   +   +     +F  +  K      VT+ ++I 
Sbjct: 565 ANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIG 624

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
           A    GR E A   F+ +   G+ P+V+TY  +   L     + +  GLF  ME+ G  P
Sbjct: 625 ALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAP 684

Query: 662 NKYTYTILINENCNAGNWQEA-LRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHA 717
           N +    L+    + G+   A + LYK + ++    +  T S L+      +Y+ HA
Sbjct: 685 NSHMLNALVRRLLHRGDISRAGVYLYK-LDEKNFSLEASTTSMLISLYSRGEYQPHA 740



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 152/524 (29%), Positives = 264/524 (50%), Gaps = 7/524 (1%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY----RMMGEFGIK--PS 242
           +++ L +F+++L       V+  N+++ V+   G S  +  V     RM  E   K  P+
Sbjct: 30  LDEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPN 89

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG-LI 301
             TY+ ++  FC+ G ++        +   G   N +  + L+ G      +++A   L+
Sbjct: 90  ACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILL 149

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
             M + G      +YN +I G+  +G + +A NL  EM+ +G+ P + TY  +I GLCK 
Sbjct: 150 LRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKA 209

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
             V  A+  F +M+ + V PD  +YN L++GY  +G   E   + +E+ +  L P  +TY
Sbjct: 210 QVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITY 269

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
             L+D LC+ G    A+   ++M  +GI PDV  Y I+++G    G LS    F + M+ 
Sbjct: 270 ALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVG 329

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
            G+ P+R  +        K     EA  +  +M  +G  PD++++  L+  LCKLG +++
Sbjct: 330 NGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDD 389

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A     +M+ +G  P+   ++S+++    +G   +  +LF  +L +G+    V +  L+ 
Sbjct: 390 AVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMC 449

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
                GR+  A      M   G+RPNVI+YN L+ G C   RID+A  L   M   G+ P
Sbjct: 450 NLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKP 509

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           N++TYTIL+   C A    +A  L++EML + + P   T++ +L
Sbjct: 510 NEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTIL 553



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 134/431 (31%), Positives = 215/431 (49%), Gaps = 9/431 (2%)

Query: 284 LITGFSRNGEL--EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL------LVEALNL 335
           +I   +R+G L  ++A  L  ++L      S  ++N ++   S  G       +V     
Sbjct: 18  VIASRARSGSLGLDEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTR 77

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
                +  VAP   TY+ILI   C+ GR+      F  +L+     ++I  + LL G C 
Sbjct: 78  MARECSSKVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCD 137

Query: 396 SGNIGEAF-LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
           +  + EA  +L   +      P VV YNT+I+G  R G +E A  L   M++QGI P+V+
Sbjct: 138 AKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVV 197

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
           TYT +++G CK   +  A+  F +M+ +G++PD   Y   I G L  G   E  ++ EEM
Sbjct: 198 TYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEM 257

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
              G  PD ITY +L+  LCK G   EA      M   G  PD   Y  ++H     G L
Sbjct: 258 STHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGAL 317

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
                  + M+  G+SP    + ++  A+A +  +E A   F++M+ +G+ P+V+++ AL
Sbjct: 318 SEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGAL 377

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           I+ LC+L R+D A   F  M  EG+ PN + ++ L+   C  G W++A  L+ E+LD+ I
Sbjct: 378 IDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGI 437

Query: 695 EPDYCTHSALL 705
             D    + L+
Sbjct: 438 CVDAVFFNTLM 448



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 136/496 (27%), Positives = 229/496 (46%), Gaps = 49/496 (9%)

Query: 109 RFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLS 168
           R F     + G+K D  ++  +L      G L              MH  LD+++G G+S
Sbjct: 286 RLFFDSMFRKGIKPDVAIYAILLHGYATKGALSE------------MHSFLDLMVGNGVS 333

Query: 169 SCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR 228
              + +I +++   Y KK+M+E+ + +FNKM + GL                        
Sbjct: 334 P--NRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGL------------------------ 367

Query: 229 EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
                       P +V++  ++D+ CK G + +A+    +M   G +PN   ++ L+ G 
Sbjct: 368 -----------SPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGL 416

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
              G+ E+A  L  ++L  G+ V A  +N ++C    +G ++EA  L + M+  GV P +
Sbjct: 417 CTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNV 476

Query: 349 ATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDE 408
            +YN L+ G C  GR+ +A      M+   + P+  +Y  LL GYC++  + +A+ LF E
Sbjct: 477 ISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFRE 536

Query: 409 LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
           +  + + P V TYNT++ GL + G    A +L  NMIN     D+ TY I++NG CK   
Sbjct: 537 MLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNF 596

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
           +  A + F  +  K  Q D   +   I   LK G   +A  L   + A G  PD++TY +
Sbjct: 597 VDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRL 656

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           +   L + GSL E + L   M   G  P+     +++   L  GD+ R       +  K 
Sbjct: 657 IAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKN 716

Query: 589 LSPTLVTYTVLIHAHA 604
            S    T ++LI  ++
Sbjct: 717 FSLEASTTSMLISLYS 732



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 102/238 (42%), Gaps = 2/238 (0%)

Query: 158 ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
           +LDV++  GL    +     +LL  Y K   V+    +F +ML  G+ P V   N I+  
Sbjct: 498 LLDVMVSNGLKP--NEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHG 555

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
           L   G   +A E+Y  M     K  I TYN +L+  CK   + EA ++   +  +    +
Sbjct: 556 LFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLD 615

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
            VT+N++I    + G  E A  L   +   GL     +Y  I     E+G L E   L  
Sbjct: 616 SVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFS 675

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
            M   G AP     N L+  L   G +S A    +++  KN   +  + + L+  Y R
Sbjct: 676 AMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLISLYSR 733



 Score = 46.2 bits (108), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 33/154 (21%), Positives = 67/154 (43%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K + V++   +F ++       D    N +I  L   G    A +++  +  +G+ P +V
Sbjct: 593 KNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVV 652

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY  + ++  +EG + E   L   M+  G +PN    N L+      G++ +A   +  +
Sbjct: 653 TYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKL 712

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
            +    + A + + +I  YS       A +L E+
Sbjct: 713 DEKNFSLEASTTSMLISLYSRGEYQPHAKSLPEK 746


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 181/670 (27%), Positives = 321/670 (47%), Gaps = 44/670 (6%)

Query: 37  YPSISESNNKDSVLNPESESYYKELIISTVEEKPWAFCNNRWVSDHFQAVVSDPELLVRV 96
           YP +++S       +  SE + ++ I   V    W   ++  +   F   ++ P  + RV
Sbjct: 64  YPFVTKSGT-----STYSEDFDRDWIRKVVHNDLW---DDPGLEKLFDLTLA-PIWVPRV 114

Query: 97  LNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMH 156
           L  ++E P++A +FF+W  T+ G K     +C +  IL  + +   A  V++ +V     
Sbjct: 115 LVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMV----- 169

Query: 157 GILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK 216
                         +S    D+  ++++                RN  +P     + +  
Sbjct: 170 --------------LSKADCDVFDVLWST---------------RNVCVPGFGVFDALFS 200

Query: 217 VLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSP 276
           VL D G   +A + +  M  F + P   + N +L  F K G+  +      +M G G  P
Sbjct: 201 VLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARP 260

Query: 277 NGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLE 336
              TYN++I    + G++E ARGL  +M   GL     +YN +I G+ + G L + +   
Sbjct: 261 TVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFF 320

Query: 337 EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS 396
           EEM      P + TYN LI   CK+G++      + EM    + P+++SY+TL+  +C+ 
Sbjct: 321 EEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKE 380

Query: 397 GNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
           G + +A   + ++R   LVP   TY +LID  C+ G+L  A +L   M+  G+  +V+TY
Sbjct: 381 GMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTY 440

Query: 457 TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA 516
           T +++G C    +  A E F +M   G+ P+  +Y   I G +K  +   A  L  E+  
Sbjct: 441 TALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKG 500

Query: 517 KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
           +G  PDL+ Y   + GLC L  +E A  ++ +M   G   + + YT+++ A  + G+   
Sbjct: 501 RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTE 560

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK-GIRPNVITYNALI 635
           G  L + M    +  T+VT+ VLI        +  A  YF+ +    G++ N   + A+I
Sbjct: 561 GLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMI 620

Query: 636 NGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIE 695
           +GLC+  +++ A  LF  M ++G++P++  YT L++ N   GN  EAL L  +M +  ++
Sbjct: 621 DGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMK 680

Query: 696 PDYCTHSALL 705
            D   +++L+
Sbjct: 681 LDLLAYTSLV 690



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 135/443 (30%), Positives = 216/443 (48%), Gaps = 36/443 (8%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K   ++  +  F +M      PDV   N +I      G      E YR M   G+KP+
Sbjct: 307 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 366

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +V+Y+T++D+FCKEG MQ+A++   +M+  G  PN  TY  LI    + G L  A  L  
Sbjct: 367 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 426

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +ML++G++ +  +Y  +I G  +   + EA  L  +M T GV P LA+YN LI+G  K  
Sbjct: 427 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 486

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYC---------------------------- 394
            +  A     E+  + + PD++ Y T ++G C                            
Sbjct: 487 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYT 546

Query: 395 -------RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
                  +SGN  E   L DE++  ++  TVVT+  LIDGLC+   +  A      + N 
Sbjct: 547 TLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISND 606

Query: 448 -GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSE 506
            G+  +   +T M++G CK   +  A   F +M++KGL PDR AYT+ + G  K G+  E
Sbjct: 607 FGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLE 666

Query: 507 AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
           A  L+++M   G   DL+ Y  LV GL     L++A   L +M+G+G  PD +   S++ 
Sbjct: 667 ALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLK 726

Query: 567 ASLEMGDLRRGRDLFNNMLRKGL 589
              E+G +    +L + +++  L
Sbjct: 727 KHYELGCIDEAVELQSYLMKHQL 749


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 176/583 (30%), Positives = 294/583 (50%), Gaps = 18/583 (3%)

Query: 62  IISTVEEKPWAFCNNRWVSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVK 121
           I+  +    W F        H    ++ P L+   L  + + P +A +F     T  G  
Sbjct: 16  ILDLIHSSQWHFIK------HLAHKIT-PSLISTALTSLHKTPDLAFQFV----THIGFG 64

Query: 122 R-DEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVL----IGGGLSSCVSIKIL 176
             D    C  + ++  +   + +  +++  +   ++ I +V     +  G+    +  + 
Sbjct: 65  DLDIKSKCLAMAVISHAPNSKPSLQLLKETINSGVYSIREVFNELGVARGVLGIKTYVLY 124

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           DLL+    +    +     F+ M   G++P V  CN ++ +   +  + KA  +Y  M  
Sbjct: 125 DLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFR 184

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
             IK S+VT+N M++  CKEG++++A E +  M+  G  PN VTYN +I G+   G +E 
Sbjct: 185 MRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEG 244

Query: 297 ARGLIRDMLKL-GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
           AR +I D++K  G+K  +++Y   I G  ++G L EA  + E+M   G+ PT  TYN LI
Sbjct: 245 AR-MIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLI 303

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
            G C  G +  A     +M+R+ ++P + +YN L++       + EA  +  E+  + LV
Sbjct: 304 DGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLV 363

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P  VTYN LI+G CR G+++ A  L + MI++GI P  +TYT ++    K G +  A + 
Sbjct: 364 PDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDL 423

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
           F +++RKG+ PD   +   I G    G+   A+ + +EM      PD +T+N L+ G C+
Sbjct: 424 FEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCR 483

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
            G +E A EL+ +M   G  PDHI+Y ++I    + GD++    + + ML  G +PTL+T
Sbjct: 484 EGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLT 543

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           Y  LI         + A     EM  KGI PN  TY +LI G+
Sbjct: 544 YNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGI 586



 Score =  275 bits (702), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 156/444 (35%), Positives = 239/444 (53%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A E + MM   G+ P +   N ML  F K    ++A  L  EM       + VT+N++I 
Sbjct: 140 AFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMIN 199

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
              + G+L++A+  I  M  LG+K +  +YN II GY  +G +  A  + + M  RGV P
Sbjct: 200 VLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKP 259

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
              TY   I G+CK G++ +A     +M    + P  ++YNTL+ GYC  GN+  AF   
Sbjct: 260 DSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYR 319

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
           D++    L+PTV TYN LI  L     ++ A  + + M  +G++PD +TY I++NG C+ 
Sbjct: 320 DKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRC 379

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           GN+  A    +EM+ KG+QP R  YT+ I    K G   +A  L E+++ KG  PDLI +
Sbjct: 380 GNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMF 439

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           N L+ G C  G+++ A  +L++M     +PD +T+ +++      G +   R+L   M  
Sbjct: 440 NALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKS 499

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
           +G+ P  ++Y  LI  ++ RG ++ AF    EM   G  P ++TYNALI GLC+    D 
Sbjct: 500 RGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDH 559

Query: 647 AYGLFIDMEEEGILPNKYTYTILI 670
           A  L  +M  +GI PN  TY  LI
Sbjct: 560 AEQLLKEMISKGITPNDNTYLSLI 583



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 154/538 (28%), Positives = 271/538 (50%), Gaps = 42/538 (7%)

Query: 193 LLVFNKMLRNGLLPDVKNCNRIIKVLRD--NGFSVKAREVYRMMGE----FGIKPSIVTY 246
           L + +K L   ++    N    +++L++  N      REV+  +G      GIK + V Y
Sbjct: 66  LDIKSKCLAMAVISHAPNSKPSLQLLKETINSGVYSIREVFNELGVARGVLGIK-TYVLY 124

Query: 247 NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
           + ++ + C+     +A E    M+G+G  P+    N +++ F ++   E+A  L  +M +
Sbjct: 125 DLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFR 184

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
           + +K S                                   + T+NI+I  LCK G++  
Sbjct: 185 MRIKSS-----------------------------------VVTFNIMINVLCKEGKLKK 209

Query: 367 ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
           A+     M    + P++++YNT+++GYC  G +  A ++FD ++ R + P   TY + I 
Sbjct: 210 AKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFIS 269

Query: 427 GLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
           G+C+ G LE A  + E M   G+ P  +TY  +++G C  GNL MA ++ ++M+R+GL P
Sbjct: 270 GMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMP 329

Query: 487 DRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
               Y   I          EA  + +EM  KG  PD +TYN+L++G C+ G++++A  L 
Sbjct: 330 TVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLH 389

Query: 547 RKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAAR 606
            +M+  G  P  +TYTS+I+   + G +++  DLF  ++RKG+ P L+ +  LI  H A 
Sbjct: 390 DEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCAN 449

Query: 607 GRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
           G ++ AF    EM    + P+ +T+N L+ G CR  +++ A  L  +M+  GI P+  +Y
Sbjct: 450 GNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISY 509

Query: 667 TILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
             LI+     G+ ++A R+  EML     P   T++AL+      +   HA + L+ +
Sbjct: 510 NTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEM 567


>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 163/547 (29%), Positives = 274/547 (50%), Gaps = 30/547 (5%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           + D+L   Y++  MV   L V  KM    L   +   N ++  LR         +VY  +
Sbjct: 170 VWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDI---MWDVYNEI 226

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
              G+  +  T   ++D  C++  +Q+A+  L E  G    P+ V++N L++GF + G +
Sbjct: 227 KASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSV 286

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           + A+     M+K GL    +SYN ++ G    G + EAL    +M   GV P + TYNIL
Sbjct: 287 DVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNIL 346

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
             G    G +S A      ML   + PD+++Y  L+ G+C+ GNI E+F L +++ S+ L
Sbjct: 347 ANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGL 406

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY------------------ 456
             ++VTY  L+  LC+ G ++ A  L   M   G+ PD++TY                  
Sbjct: 407 KLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIELYEEMCSK 466

Query: 457 ---------TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
                    + +++G  + G +S A+ +F+ + +  +  +   Y   I G  KLG+  EA
Sbjct: 467 RIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEA 526

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
            R  ++++ KG  P ++T+N L++G CK G L EA +LL  +   G +P  +TYT++++ 
Sbjct: 527 VRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNG 586

Query: 568 SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
             E GD+    D+ + M  K + PT +TYTV++      GRL  +      M  +G+ P+
Sbjct: 587 YCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPD 646

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYK 687
            ITYN +I   C+   + +A+ L   M +  + P+  TY +LIN  C  GN ++A RL  
Sbjct: 647 QITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLV 706

Query: 688 EMLDREI 694
            + D+ I
Sbjct: 707 TLQDQSI 713



 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 165/559 (29%), Positives = 281/559 (50%), Gaps = 27/559 (4%)

Query: 165 GGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS 224
           GG     S+   + L+  + K   V+     F  M++ GLLPDV + N ++  L   G  
Sbjct: 262 GGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSM 321

Query: 225 VKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVL 284
            +A E    M   G++P IVTYN + + F   G +  A +++  M   G +P+ VTY +L
Sbjct: 322 EEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTIL 381

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           I G  + G +E++  L   ML  GLK+S  +Y  ++    + G + EA+ L  EM   G+
Sbjct: 382 ICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGL 441

Query: 345 APTLATYN---------------------------ILIYGLCKWGRVSDARHRFFEMLRK 377
            P L TY+                            +I GL + G +S+A+  F  + + 
Sbjct: 442 KPDLLTYSRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKS 501

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
           +V  +II YN ++ GY + GNIGEA   + ++  + + PT+VT+N+LI G C+ G L  A
Sbjct: 502 DVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEA 561

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
            +L + +   G++P  +TYT ++NG C+ G++    +  +EM  K ++P +  YT  + G
Sbjct: 562 VKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKG 621

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
             K G   E+ +L + M A+G  PD ITYN ++   CK   L++A +L  +M+     P 
Sbjct: 622 LCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPS 681

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
            +TY  +I+     G+L+    L   +  + +  T V YT +I AH A+G ++ A ++F 
Sbjct: 682 PVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFH 741

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
           +M  +G   ++  Y+A+IN LC+   I  A   F  M   GI P++    +++N    +G
Sbjct: 742 QMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSG 801

Query: 678 NWQEALRLYKEMLDREIEP 696
           +      ++  M+   + P
Sbjct: 802 DPNSVFEIFAMMIKCGLLP 820



 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 148/526 (28%), Positives = 262/526 (49%), Gaps = 49/526 (9%)

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM---QGRGCSP---------------N 277
           E+G + S V++  +     ++G+ +E   +L +M   +G G +P               N
Sbjct: 108 EYGFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCELLCNSFRDWDLN 167

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
            V +++L   +SR   +  A  ++  M  L L+VS  +YN ++       ++ +  N   
Sbjct: 168 NVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWDVYN--- 224

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
           E+   GV     T  ILI GLC+  R+ DA     E   +   P ++S+N L+ G+C+ G
Sbjct: 225 EIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMG 284

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
           ++  A   F  +    L+P V +YN L+ GLC  G +E A +   +M N G+ PD++TY 
Sbjct: 285 SVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYN 344

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
           I+ NG   +G +S A +    ML  GL PD   YT  I G  ++G+  E+++L+E+ML++
Sbjct: 345 ILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQ 404

Query: 518 GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY---------------- 561
           G    ++TY VL+  LCK G ++EA  LL +M   G  PD +TY                
Sbjct: 405 GLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIELYEEMC 464

Query: 562 -----------TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
                      ++II    E G +   +  F+++ +  ++  ++ Y ++I  +A  G + 
Sbjct: 465 SKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIG 524

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
            A   + ++  KGI P ++T+N+LI G C+  ++ +A  L   ++  G++P   TYT L+
Sbjct: 525 EAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLM 584

Query: 671 NENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVH 716
           N  C  G+      +  EM  + I+P   T++ +++K L K+ ++H
Sbjct: 585 NGYCEEGDMHSMFDMLHEMEAKAIKPTQITYT-VVVKGLCKEGRLH 629



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 200/398 (50%), Gaps = 33/398 (8%)

Query: 359 CKWGR---VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
           C + R   V DA     +M   N+   I +YN+LLY   R  +I   + +++E+++  + 
Sbjct: 176 CAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNL-RHTDI--MWDVYNEIKASGVP 232

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
               T   LIDGLCR   L+ A         +   P V+++  +++G CKMG++ +A+ F
Sbjct: 233 QNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSF 292

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
           F  M++ GL PD ++Y   + G    G   EA     +M   G  PD++TYN+L +G   
Sbjct: 293 FCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRI 352

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
           LG +  A +++++M+ +G  PD +TYT +I    +MG++     L   ML +GL  ++VT
Sbjct: 353 LGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVT 412

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY------------------------ 631
           YTVL+ +    GR++ A +   EM+V G++P+++TY                        
Sbjct: 413 YTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIELYEEMCSKRIYPNS 472

Query: 632 ---NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
              +A+I+GL     I +A   F  + +  +      Y I+I+     GN  EA+R YK+
Sbjct: 473 FVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQ 532

Query: 689 MLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
           ++++ I P   T ++L+     K     AV+ L+++ +
Sbjct: 533 IIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKV 570



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/344 (29%), Positives = 176/344 (51%), Gaps = 15/344 (4%)

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL--EVAQQLK 441
           + ++ L   Y R+  + +A  +  +++  NL  ++ TYN+L+  L R+ D+  +V  ++K
Sbjct: 169 VVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNL-RHTDIMWDVYNEIK 227

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
            +    G+  +  T  I+++G C+   L  A  F  E   +   P   ++   ++G  K+
Sbjct: 228 AS----GVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKM 283

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
           G    A      M+  G  PD+ +YN+L+HGLC  GS+EEA E    M   G  PD +TY
Sbjct: 284 GSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTY 343

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
             + +    +G +     +   ML  GL+P LVTYT+LI  H   G +E +F    +M  
Sbjct: 344 NILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLS 403

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
           +G++ +++TY  L++ LC+  RID+A  L  +ME  G+ P+  TY+         G  +E
Sbjct: 404 QGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYS--------RGAVEE 455

Query: 682 ALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
           A+ LY+EM  + I P+    SA++    +K     A  Y +S+T
Sbjct: 456 AIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVT 499


>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
          Length = 826

 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 174/614 (28%), Positives = 296/614 (48%), Gaps = 53/614 (8%)

Query: 96  VLNRIREKPRIALRFFRWVETQPGVKR--DEFVFCTILEILIESGLLRSAYWVVETVVCV 153
           V ++I + PR+ L FF W   Q  +    D FV  ++L++L    + +    ++ET+   
Sbjct: 67  VFDQIHD-PRLGLNFFEWASKQSTLSNSLDGFVCSSLLKLLARFRVFKEIENLLETMKSK 125

Query: 154 NMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLR-NGLLPDVKNCN 212
            +           + +C   + L  ++  Y    +V++ L ++N ++  +  +PDV  CN
Sbjct: 126 EL-----------IPTC---EALSFVISAYAGSGLVKEALELYNTVIDVHNCVPDVFACN 171

Query: 213 RIIKVLRDNGFSVKAREVYRMM----GEF------------------------------- 237
            ++ +L  +G    AR+VY  M    G+                                
Sbjct: 172 SLLNLLVHHGKVEIARKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIEKRWGK 231

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G  P+IV YNT++D +CK G+++ A  L  E++ +G  P   TY  +I  F + G+ E  
Sbjct: 232 GCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAV 291

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L+ +M + GL VS   +N II    + G  +EA +    M+  G  P +ATYN LI G
Sbjct: 292 DKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLING 351

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
            C  G+V +A       +R+ + P+  SY  L++ + ++G    A  L  E+  R     
Sbjct: 352 SCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLD 411

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           ++ Y  L+ GL   G+++VA  +++ M+ +GILPD   Y ++++G CK G    A++   
Sbjct: 412 LIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLV 471

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           EML + + PD F   T + G ++ G+  EA +L +  + +G    ++  N ++ G CK G
Sbjct: 472 EMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYG 531

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            + +A    ++M      PD  TY++II   ++  DLR    +F  ML+K   P +VT+T
Sbjct: 532 MMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFT 591

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
            LI+     G L  A   F EM+  G  PNV+TY  LI   C+  ++ +A   F  M   
Sbjct: 592 SLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLIN 651

Query: 658 GILPNKYTYTILIN 671
             +PN  T+  L+N
Sbjct: 652 KCIPNDATFNYLVN 665



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 143/485 (29%), Positives = 229/485 (47%), Gaps = 46/485 (9%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           ++K    ++  + KK   E    +  +M   GL   ++  N II     +G  ++A +  
Sbjct: 271 TVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAV 330

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
           R M E G +P + TYNT+++  C +G+++EA ELL     RG  PN  +Y  LI  FS+N
Sbjct: 331 RWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKN 390

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           GE  +A  L+ +M + G  +   +Y  ++ G    G +  AL + ++M+ RG+ P    Y
Sbjct: 391 GEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIY 450

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           N+L+ GLCK GR   A+    EML +NV PD     TL+ G+ R GN+ EA  LF     
Sbjct: 451 NVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIE 510

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           R +  +VV  N +I G C+YG +  A    + M N    PD  TY+ +++G  K  +L  
Sbjct: 511 RGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRG 570

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A   F  ML+K  +P+   +T+ I G  + GD + A ++ EEM + GF P+++TY +L+ 
Sbjct: 571 ALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIG 630

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHIT------------------------------- 560
             CK G L +A     +M+ +  IP+  T                               
Sbjct: 631 YFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNNNGIAISSKRSNSQPNLTLEF 690

Query: 561 ---------------YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
                          Y SI+    +   ++    L + M+ KG  P  V++  L+H    
Sbjct: 691 FGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALLHGLCL 750

Query: 606 RGRLE 610
            GRL+
Sbjct: 751 EGRLQ 755



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/432 (29%), Positives = 207/432 (47%), Gaps = 1/432 (0%)

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
           S +G   + L+   +R    ++   L+  M    L  +  + + +I  Y+  GL+ EAL 
Sbjct: 93  SLDGFVCSSLLKLLARFRVFKEIENLLETMKSKELIPTCEALSFVISAYAGSGLVKEALE 152

Query: 335 LEEEMV-TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
           L   ++      P +   N L+  L   G+V  AR  + EM+ +N   D  +   +  G 
Sbjct: 153 LYNTVIDVHNCVPDVFACNSLLNLLVHHGKVEIARKVYDEMVDRNGDVDNYTVCIVTKGL 212

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
           C+ G + E   L ++   +  VP +V YNTLIDG C+ GD+E A  L + +  +G LP V
Sbjct: 213 CKEGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTV 272

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
            TY  M+N  CK G      +   EM  +GL      +   I    K G   EA      
Sbjct: 273 KTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRW 332

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           M+  G  PD+ TYN L++G C  G + EA ELL   +  G  P+  +YT +IHA  + G+
Sbjct: 333 MIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGE 392

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
             R  +L   M  +G +  L+ Y  L+H     G +++A     +M  +GI P+   YN 
Sbjct: 393 YVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNV 452

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
           L++GLC+  R   A  L ++M ++ + P+ +    L++     GN  EA +L++  ++R 
Sbjct: 453 LMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERG 512

Query: 694 IEPDYCTHSALL 705
           I+      +A++
Sbjct: 513 IDTSVVECNAMI 524



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 149/552 (26%), Positives = 232/552 (42%), Gaps = 106/552 (19%)

Query: 260 QEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKV-SAHSYNP 318
           +E   LL  M+ +   P     + +I+ ++ +G +++A  L   ++ +   V    + N 
Sbjct: 113 KEIENLLETMKSKELIPTCEALSFVISAYAGSGLVKEALELYNTVIDVHNCVPDVFACNS 172

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           ++      G +  A  + +EMV R       T  I+  GLCK G+V + RH   +   K 
Sbjct: 173 LLNLLVHHGKVEIARKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKG 232

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
            +P+I+ YNTL+ GYC++G+I  A LLF EL+ +  +PTV TY  +I+  C+ G  E   
Sbjct: 233 CVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVD 292

Query: 439 QL----KEN-------------------------------MINQGILPDVITYTIMVNGS 463
           +L    KE                                MI  G  PD+ TY  ++NGS
Sbjct: 293 KLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGS 352

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
           C  G +  A E     +R+GL P++F+YT  I    K G+   A  L  EM  +G   DL
Sbjct: 353 CSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDL 412

Query: 524 ITYNVLVH-----------------------------------GLCKLGSLEEANELLRK 548
           I Y  LVH                                   GLCK G    A +LL +
Sbjct: 413 IAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVE 472

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL------------------- 589
           M+     PD     +++   +  G+L   + LF   + +G+                   
Sbjct: 473 MLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGM 532

Query: 590 ----------------SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
                           SP   TY+ +I  +  +  L  A   F  M  K  +PNV+T+ +
Sbjct: 533 MNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTS 592

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
           LING CR   +++A  +F +M   G  PN  TYTILI   C  G   +A   +++ML  +
Sbjct: 593 LINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINK 652

Query: 694 IEPDYCTHSALL 705
             P+  T + L+
Sbjct: 653 CIPNDATFNYLV 664



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 189/407 (46%), Gaps = 46/407 (11%)

Query: 186 KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVT 245
           K  V +   +    +R GL P+  +   +I     NG  V+A E+   M E G    ++ 
Sbjct: 355 KGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIA 414

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           Y  ++      GE+  AL +  +M  RG  P+   YNVL++G  + G    A+ L+ +ML
Sbjct: 415 YGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEML 474

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
              +   A     ++ G+   G L EA  L +  + RG+  ++   N +I G CK+G ++
Sbjct: 475 DQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMN 534

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
           DA   F  M      PD  +Y+T++ GY +  ++  A  +F  +  +   P VVT+ +LI
Sbjct: 535 DALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLI 594

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML----- 480
           +G CR GDL  A+++ E M + G  P+V+TYTI++   CK G L+ A  FF +ML     
Sbjct: 595 NGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCI 654

Query: 481 ------------------------RKGLQPDR-----------------FAYTTQIAGEL 499
                                   R   QP+                   AY + +    
Sbjct: 655 PNDATFNYLVNGLTNNNGIAISSKRSNSQPNLTLEFFGMMISDGWDWRIAAYNSILLCLC 714

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
           +      A +L ++M++KGFPPD +++  L+HGLC  G L++ N ++
Sbjct: 715 QHKMVKPALQLHDKMMSKGFPPDPVSFIALLHGLCLEGRLQDWNNVI 761



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 73/302 (24%), Positives = 127/302 (42%), Gaps = 36/302 (11%)

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           ++L+  L R+   +  + L E M ++ ++P     + +++     G +  A E +N ++ 
Sbjct: 100 SSLLKLLARFRVFKEIENLLETMKSKELIPTCEALSFVISAYAGSGLVKEALELYNTVID 159

Query: 482 -KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
                PD FA  + +   +  G    A ++ +EM+ +    D  T  ++  GLCK G +E
Sbjct: 160 VHNCVPDVFACNSLLNLLVHHGKVEIARKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVE 219

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           E   L+ K  G                                   KG  P +V Y  LI
Sbjct: 220 EGRHLIEKRWG-----------------------------------KGCVPNIVFYNTLI 244

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
             +   G +E A + F E++VKG  P V TY A+IN  C+  + +    L ++M+E G+ 
Sbjct: 245 DGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLA 304

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
            +   +  +I+     G   EA    + M++   EPD  T++ L+     K     A E 
Sbjct: 305 VSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEEL 364

Query: 721 LE 722
           LE
Sbjct: 365 LE 366


>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera]
 gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 156/486 (32%), Positives = 257/486 (52%), Gaps = 30/486 (6%)

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLW-----------------EMQGRGCSPNGVTYNVL 284
           SI +Y TM    C    + EA  LL                   ++ RG   + + ++VL
Sbjct: 102 SIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVL 161

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGY-----SEKGLLVEALNLEEEM 339
           +  ++ +G    A    R + K  L++  HS     CGY      +  L   A    EE+
Sbjct: 162 MNAYTDSGYFSDAIQCFRLVRKHNLQIPFHS-----CGYLFDRLMKLNLTSPAWAFYEEI 216

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
           +  G  P +  +N+L++ LCK  ++++A+  F E+ ++ + P ++S+NTL+ GYC+SGN+
Sbjct: 217 LDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNL 276

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
            + F L   +    + P V TY+ LI+GLC+ G L+ A +L   M ++G++P+ +T+T +
Sbjct: 277 DQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTL 336

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           +NG C  G   +  E + +MLRKG++PD   Y T I G  K+GD  EA +L  EM  +G 
Sbjct: 337 INGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGL 396

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
            PD  TY +L+ G CK G LE A E+ ++MV +G   D++ +T++I      G +     
Sbjct: 397 KPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAER 456

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
               ML  G+ P   TYT++IH    +G ++  F    EMQ  G  P V+TYN L+NGLC
Sbjct: 457 TLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLC 516

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
           +  ++  A  L   M   G++P+  TY IL+  +C  GN ++  +L  E   + +  DY 
Sbjct: 517 KQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNREDFDKLQSE---KGLVQDYG 573

Query: 700 THSALL 705
           ++++L+
Sbjct: 574 SYTSLI 579



 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 162/508 (31%), Positives = 253/508 (49%), Gaps = 8/508 (1%)

Query: 97  LNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMH 156
           LN     P   L FF+W+ TQ   +     +CT+   L    +L  A  +++ VV     
Sbjct: 76  LNPHSLSPPSLLSFFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGK 135

Query: 157 GILDVLIGGGL---SSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNR 213
                +    L    +  S  +  +L+  YT        +  F  + ++ L     +C  
Sbjct: 136 NSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGY 195

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
           +   L     +  A   Y  + + G  P +  +N ++   CKE ++ EA  L  E+  RG
Sbjct: 196 LFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRG 255

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
             P  V++N LI G+ ++G L+Q   L R M++  +     +Y+ +I G  ++G L +A 
Sbjct: 256 LRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDAN 315

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
            L  EM  RG+ P   T+  LI G C  GR       + +MLRK V PD+I+YNTL+ G 
Sbjct: 316 KLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGL 375

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
           C+ G++ EA  L  E+  R L P   TY  LIDG C+ GDLE A ++++ M+ +GI  D 
Sbjct: 376 CKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDN 435

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
           + +T +++G C+ G +  A     EML  G++PD   YT  I G  K GD    ++L +E
Sbjct: 436 VAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKE 495

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           M   G  P ++TYNVL++GLCK G ++ AN LL  M+  G +PD ITY  ++    + G+
Sbjct: 496 MQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGN 555

Query: 574 LRRGRDLFNNML-RKGLSPTLVTYTVLI 600
               R+ F+ +   KGL     +YT LI
Sbjct: 556 ----REDFDKLQSEKGLVQDYGSYTSLI 579


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 158/499 (31%), Positives = 257/499 (51%), Gaps = 2/499 (0%)

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM--QGRGCSPNGVTYNVLITG 287
           V R M + G  P++ +YN +L   C E   QEALELL  M   G  C P+ V+Y  +I G
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208

Query: 288 FSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPT 347
           F + G+L++A G   +ML  G+  +  +YN II    +   + +A+ +   MV  GV P 
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268

Query: 348 LATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFD 407
             TYN +++G C  G+  +A     +M    V PD+++YN+L+   C++G   EA  +FD
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328

Query: 408 ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG 467
            +  R L P + TY TL+ G    G L     L + M+  GI P+   ++I++    K G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
            +  A   F++M ++GL PD   Y T I    K G   +A R  E+M+ +   P  I YN
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
            L+H LC     ++A EL+ +M+  G   D I + SII +  + G +     LF+ M+R 
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
           G+ P ++TY+ LI  +   G+++ A    + M   G++P+ +TYN LING C++ R++ A
Sbjct: 509 GVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568

Query: 648 YGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLK 707
             LF +ME  G+ P+  TY I++           A  LY  + +   + +  T++ +L  
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHG 628

Query: 708 QLDKDYKVHAVEYLESLTL 726
               +    A+   ++L L
Sbjct: 629 LCKNNLTDEALRMFQNLCL 647



 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 149/487 (30%), Positives = 256/487 (52%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K+  +++    +++ML  G+LP+V   N II  L       KA EV   M + G+ P+
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             TYN+++  +C  G+ +EA+  L +M   G  P+ VTYN L+    +NG   +AR +  
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M K GLK    +Y  ++ GY+ KG LVE   L + MV  G+ P    ++ILI    K G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           +V  A   F +M ++ + PD ++Y T++   C+SG + +A   F+++    L P  + YN
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           +LI  LC +   + A++L   M+++GI  D I +  +++  CK G +  + + F+ M+R 
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G++P+   Y+T I G    G   EA +L   M++ G  PD +TYN L++G CK+  +E+A
Sbjct: 509 GVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             L R+M   G  PD ITY  I+    +       ++L+  +   G    L TY +++H 
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHG 628

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
                  + A   F  + +  ++    T+N +I  L ++ R D+A  LF  +   G++P+
Sbjct: 629 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688

Query: 663 KYTYTIL 669
             TY+++
Sbjct: 689 VRTYSLM 695



 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 158/498 (31%), Positives = 259/498 (52%), Gaps = 2/498 (0%)

Query: 194 LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG--IKPSIVTYNTMLD 251
           +V  +M + G +P+V + N ++K L D   S +A E+ +MM + G    P +V+Y T+++
Sbjct: 148 IVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVIN 207

Query: 252 SFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKV 311
            F KEG++ +A     EM  RG  PN VTYN +I    +   +++A  ++  M+K G+  
Sbjct: 208 GFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMP 267

Query: 312 SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRF 371
           +  +YN I+ GY   G   EA+   ++M + GV P + TYN L+  LCK GR ++AR  F
Sbjct: 268 NCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMF 327

Query: 372 FEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY 431
             M ++ + P+I +Y TLL GY   G + E   L D +    + P    ++ LI    + 
Sbjct: 328 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQ 387

Query: 432 GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAY 491
           G ++ A  +   M  QG+ PD +TY  ++   CK G +  A  +F +M+ + L P    Y
Sbjct: 388 GKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVY 447

Query: 492 TTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
            + I          +A  L  EML +G   D I +N ++   CK G + E+ +L   MV 
Sbjct: 448 NSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVR 507

Query: 552 DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLEL 611
            G  P+ ITY+++I      G +     L  +M+  G+ P  VTY  LI+ +    R+E 
Sbjct: 508 IGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMED 567

Query: 612 AFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
           A + F EM+  G+ P++ITYN ++ GL + RR   A  L++ + E G      TY I+++
Sbjct: 568 ALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILH 627

Query: 672 ENCNAGNWQEALRLYKEM 689
             C      EALR+++ +
Sbjct: 628 GLCKNNLTDEALRMFQNL 645



 Score =  248 bits (634), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 154/553 (27%), Positives = 266/553 (48%), Gaps = 44/553 (7%)

Query: 195 VFNKMLRNGLLPDVKNCN-RIIKVLRDNGFSVKAREVYRMMGEFG---IKPSIVTYNTML 250
           VF+++LR G    +   N  +  V R +  +  +R  Y  M   G   + P++ TY  ++
Sbjct: 41  VFDELLRRGRGASIYGLNCALADVARHSPAAAVSR--YNRMARAGADEVTPNLCTYGILI 98

Query: 251 DSFCKEGEM-----------------------------------QEALEL-LWEMQGRGC 274
            S C  G +                                    +A+++ L  M   GC
Sbjct: 99  GSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGC 158

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH--SYNPIICGYSEKGLLVEA 332
            PN  +YN+L+ G       ++A  L++ M   G        SY  +I G+ ++G L +A
Sbjct: 159 IPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKA 218

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
                EM+ RG+ P + TYN +I  LCK   +  A      M++  V+P+  +YN++++G
Sbjct: 219 YGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHG 278

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
           YC SG   EA     ++ S  + P VVTYN+L+D LC+ G    A+++ ++M  +G+ P+
Sbjct: 279 YCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE 338

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
           + TY  ++ G    G L       + M+R G+ P+ + ++  I    K G   +A  +  
Sbjct: 339 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFS 398

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           +M  +G  PD +TY  ++  LCK G +E+A     +M+ +   P +I Y S+IH+     
Sbjct: 399 KMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFD 458

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
              + ++L   ML +G+    + +  +I +H   GR+  +   F  M   G++PN+ITY+
Sbjct: 459 KWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYS 518

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
            LI+G C   ++D+A  L   M   G+ P+  TY  LIN  C     ++AL L++EM   
Sbjct: 519 TLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESS 578

Query: 693 EIEPDYCTHSALL 705
            + PD  T++ +L
Sbjct: 579 GVSPDIITYNIIL 591



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 139/498 (27%), Positives = 250/498 (50%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   +++ + V   M++NG++P+ +  N I+     +G   +A    + M   G++P +V
Sbjct: 246 KAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVV 305

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TYN+++D  CK G   EA ++   M  RG  P   TY  L+ G++  G L +  GL+  M
Sbjct: 306 TYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 365

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           ++ G+  + + ++ +IC Y+++G + +A+ +  +M  +G+ P   TY  +I  LCK GRV
Sbjct: 366 VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRV 425

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            DA   F +M+ + + P  I YN+L++  C      +A  L  E+  R +    + +N++
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSI 485

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           ID  C+ G +  +++L + M+  G+ P++ITY+ +++G C  G +  A +    M+  G+
Sbjct: 486 IDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGM 545

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
           +PD   Y T I G  K+    +A  L  EM + G  PD+ITYN+++ GL +      A E
Sbjct: 546 KPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKE 605

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           L   +   G   +  TY  I+H   +         +F N+    L     T+ ++I A  
Sbjct: 606 LYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 665

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
             GR + A   F+ +   G+ P+V TY+ +   L     +++   LF+ MEE G   N  
Sbjct: 666 KVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSR 725

Query: 665 TYTILINENCNAGNWQEA 682
               ++ +    G+   A
Sbjct: 726 MLNSIVRKLLQRGDITRA 743



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 123/417 (29%), Positives = 204/417 (48%), Gaps = 7/417 (1%)

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG---VAPTLATY 351
           E AR +  ++L+ G   S +  N  +   +       A++    M   G   V P L TY
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSP-AAAVSRYNRMARAGADEVTPNLCTY 94

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF-LLFDELR 410
            ILI   C  GR+         +++K    D I++  LL G C      +A  ++   + 
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG--ILPDVITYTIMVNGSCKMGN 468
               +P V +YN L+ GLC     + A +L + M + G    PDV++YT ++NG  K G+
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
           L  A   ++EML +G+ P+   Y + IA   K     +A  +   M+  G  P+  TYN 
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           +VHG C  G  +EA   L+KM  DG  PD +TY S++    + G     R +F++M ++G
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
           L P + TY  L+  +A +G L         M   GI PN   ++ LI    +  ++DQA 
Sbjct: 335 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            +F  M ++G+ P+  TY  +I   C +G  ++A+R +++M+D  + P    +++L+
Sbjct: 395 LVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 130/475 (27%), Positives = 228/475 (48%), Gaps = 15/475 (3%)

Query: 103 KPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVL 162
           +P+ A+ F + + +  GV+ D   + ++++ L ++G             C     + D +
Sbjct: 284 QPKEAIGFLKKMHSD-GVEPDVVTYNSLMDYLCKNGR------------CTEARKMFDSM 330

Query: 163 IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG 222
              GL     I     LL  Y  K  + +   + + M+RNG+ P+    + +I      G
Sbjct: 331 TKRGLKP--EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 223 FSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYN 282
              +A  V+  M + G+ P  VTY T++   CK G +++A+    +M     SP  + YN
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
            LI       + ++A+ LI +ML  G+ +    +N II  + ++G ++E+  L + MV  
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           GV P + TY+ LI G C  G++ +A      M+   + PD ++YNTL+ GYC+   + +A
Sbjct: 509 GVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
            +LF E+ S  + P ++TYN ++ GL +      A++L   +   G   ++ TY I+++G
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHG 628

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            CK      A   F  +    LQ +   +   I   LK+G   EA  L   + A G  PD
Sbjct: 629 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
           + TY+++   L + G LEE ++L   M  +G   +     SI+   L+ GD+ R 
Sbjct: 689 VRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 167/561 (29%), Positives = 281/561 (50%), Gaps = 46/561 (8%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL-----RDNGFSVKARE 229
           ILD  +  Y   +       +FN+M R  L P++  CN +I  L     + + +  KA  
Sbjct: 141 ILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKA-- 198

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           ++  + + G+K +  T+N ++   C E ++ EA+ L+ +M+   C P+ V+YN ++    
Sbjct: 199 IFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLC 258

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           + G+L +AR L+ DM   GL  + +++N ++ GY + G L EA  + + M    V P + 
Sbjct: 259 KKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVW 318

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           TYN+LI GLCK G++ +A     EM    ++PD+++YNTL+ G     +  + F L D++
Sbjct: 319 TYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKM 378

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
             + + P  VTYN ++    + G ++ A      M   G  PD +T+  ++NG CK G L
Sbjct: 379 EGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRL 438

Query: 470 SMAREFFNEMLRKGLQ-----------------------------------PDRFAYTTQ 494
           S A    +EM RKGL+                                    D  +Y T 
Sbjct: 439 SEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTL 498

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I G  K G + EA +L +EM  K   P +ITYN ++ GLC  G  +++ + L +++  G 
Sbjct: 499 IMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGL 558

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
           +PD  TY +II      G + +     N M++K   P L T  +L+      G L+ A  
Sbjct: 559 VPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALK 618

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F+    KG   + +TYN +I+GLC+  R ++A+ L  +MEE+ + P+ YTY  +++   
Sbjct: 619 LFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALA 678

Query: 675 NAGNWQEALRLYKEMLDREIE 695
           +AG  +EA    +E + R +E
Sbjct: 679 DAGRMKEA----EEFMSRIVE 695



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 153/547 (27%), Positives = 267/547 (48%), Gaps = 43/547 (7%)

Query: 123 DEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLI 182
           D   + TIL++L + G L  A  +           +LD+   G L +       ++L+  
Sbjct: 246 DNVSYNTILDVLCKKGKLNEARDL-----------LLDMKNNGLLPN---RNTFNILVSG 291

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE---FGI 239
           Y K   +++   V + M +N +LPDV   N +I  L  +G   K  E +R+  E     +
Sbjct: 292 YCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDG---KIDEAFRLKDEMENLKL 348

Query: 240 KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
            P +VTYNT+++         +  EL+ +M+G+G  PN VTYNV++  + + G+++ A  
Sbjct: 349 LPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGN 408

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
            +R M + G      ++N +I GY + G L EA  + +EM  +G+     T N +++ LC
Sbjct: 409 ELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLC 468

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
              ++ DA        ++    D +SY TL+ GY + G   EA  L+DE++ + ++P+++
Sbjct: 469 GERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSII 528

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
           TYNT+I GLC  G  + +      ++  G++PD  TY  ++ G C+ G +  A +F N+M
Sbjct: 529 TYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKM 588

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
           ++K  +PD F     + G    G   +A +L    ++KG   D +TYN ++ GLCK    
Sbjct: 589 VKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRF 648

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG----------- 588
           EEA +LL +M      PD  TY +I+ A  + G ++   +  + ++ +G           
Sbjct: 649 EEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNK 708

Query: 589 ------------LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
                         P  VT++  I+    +G+ + A     E   KGI  +  TY +L+ 
Sbjct: 709 RKIESSSETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLME 768

Query: 637 GLCRLRR 643
           GL + R+
Sbjct: 769 GLIKRRK 775



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 138/465 (29%), Positives = 240/465 (51%), Gaps = 3/465 (0%)

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR---NGELEQARGL 300
           V  +T + ++        A ++   M+     PN +T N LI    R      +  ++ +
Sbjct: 140 VILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAI 199

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
             D++KLG+KV+ +++N +I G   +  L EA+ L  +M      P   +YN ++  LCK
Sbjct: 200 FSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCK 259

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G++++AR    +M    ++P+  ++N L+ GYC+ G + EA  + D +   N++P V T
Sbjct: 260 KGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWT 319

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YN LI GLC+ G ++ A +LK+ M N  +LPDV+TY  ++NG     +     E  ++M 
Sbjct: 320 YNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKME 379

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            KG++P+   Y   +   +K G    A     +M   GF PD +T+N L++G CK G L 
Sbjct: 380 GKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLS 439

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA  ++ +M   G   + +T  +I+H       L     L ++  ++G     V+Y  LI
Sbjct: 440 EAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLI 499

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
             +   G+   A   + EM+ K I P++ITYN +I GLC   + DQ+     ++ E G++
Sbjct: 500 MGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLV 559

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           P++ TY  +I   C  G  ++A + + +M+ +  +PD  T + LL
Sbjct: 560 PDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILL 604


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 143/489 (29%), Positives = 266/489 (54%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           GI+  + T   M++ +C++ ++  A  +L      G  P+ +T++ L+ GF   G + +A
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 159

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L+  M+++  +    + + +I G   KG + EAL L + MV  G  P   TY  ++  
Sbjct: 160 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 219

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           LCK G  + A   F +M  +N+   ++ Y+ ++   C+ G+  +A  LF+E+  + +   
Sbjct: 220 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKAD 279

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           VVTY++LI GLC  G  +   ++   MI + I+PDV+T++ +++   K G L  A+E +N
Sbjct: 280 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN 339

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           EM+ +G+ PD   Y + I G  K     EA ++ + M++KG  PD++TY++L++  CK  
Sbjct: 340 EMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAK 399

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            +++   L R++   G IP+ ITY +++    + G L   ++LF  M+ +G+ P++VTY 
Sbjct: 400 RVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYG 459

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           +L+      G L  A   F +MQ   +   +  YN +I+G+C   ++D A+ LF  + ++
Sbjct: 460 ILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDK 519

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHA 717
           G+ P+  TY ++I   C  G+  EA  L+++M +    PD  T++ L+   L     + +
Sbjct: 520 GVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISS 579

Query: 718 VEYLESLTL 726
           VE +E + +
Sbjct: 580 VELIEEMKV 588



 Score =  268 bits (685), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 149/429 (34%), Positives = 237/429 (55%), Gaps = 1/429 (0%)

Query: 186 KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVT 245
           K  V + L++ ++M+  G  PD      ++  L  +G S  A +++R M E  IK S+V 
Sbjct: 188 KGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQ 247

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           Y+ ++DS CK+G   +AL L  EM+ +G   + VTY+ LI G   +G+ +    ++R+M+
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
              +     +++ +I  + ++G L+EA  L  EM+TRG+AP   TYN LI G CK   + 
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
           +A   F  M+ K   PDI++Y+ L+  YC++  + +   LF E+ S+ L+P  +TYNTL+
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
            G C+ G L  A++L + M+++G+ P V+TY I+++G C  G L+ A E F +M +  + 
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 487

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
                Y   I G        +A+ L   +  KG  PD++TYNV++ GLCK GSL EA+ L
Sbjct: 488 LGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADML 547

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
            RKM  DG  PD  TY  +I A L    L    +L   M   G S    T  ++I   + 
Sbjct: 548 FRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSD 607

Query: 606 RGRLELAFM 614
           R RL+ +F+
Sbjct: 608 R-RLDKSFL 615



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 144/465 (30%), Positives = 240/465 (51%), Gaps = 10/465 (2%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR-----EV 230
           + +++  Y +K  +     V  +  + G  PD    + ++     NGF ++ R      +
Sbjct: 108 MTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLV-----NGFCLEGRVSEAVAL 162

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
              M E   +P +VT +T+++  C +G + EAL L+  M   G  P+ VTY  ++    +
Sbjct: 163 VDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCK 222

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
           +G    A  L R M +  +K S   Y+ +I    + G   +AL+L  EM  +G+   + T
Sbjct: 223 SGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVT 282

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           Y+ LI GLC  G+  D      EM+ +N+IPD+++++ L+  + + G + EA  L++E+ 
Sbjct: 283 YSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI 342

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
           +R + P  +TYN+LIDG C+   L  A Q+ + M+++G  PD++TY+I++N  CK   + 
Sbjct: 343 TRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVD 402

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
                F E+  KGL P+   Y T + G  + G  + A  L +EM+++G PP ++TY +L+
Sbjct: 403 DGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 462

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
            GLC  G L +A E+  KM           Y  IIH       +     LF ++  KG+ 
Sbjct: 463 DGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVK 522

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALI 635
           P +VTY V+I     +G L  A M F +M+  G  P+  TYN LI
Sbjct: 523 PDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 129/432 (29%), Positives = 222/432 (51%)

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
           ++ +A++L   M      P  + +N L +  +R  + +   G  + M   G++   ++  
Sbjct: 50  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            +I  Y  K  L+ A ++       G  P   T++ L+ G C  GRVS+A      M+  
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
              PD+++ +TL+ G C  G + EA +L D +      P  VTY  +++ LC+ G+  +A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
             L   M  + I   V+ Y+I+++  CK G+   A   FNEM  KG++ D   Y++ I G
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
               G   +  ++  EM+ +   PD++T++ L+    K G L EA EL  +M+  G  PD
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
            ITY S+I    +   L     +F+ M+ KG  P +VTY++LI+++    R++     F 
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
           E+  KG+ PN ITYN L+ G C+  +++ A  LF +M   G+ P+  TY IL++  C+ G
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469

Query: 678 NWQEALRLYKEM 689
              +AL ++++M
Sbjct: 470 ELNKALEIFEKM 481



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 174/348 (50%), Gaps = 15/348 (4%)

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           L  +  +++A+  + E LR N I DI               + +A  LF+ +     +PT
Sbjct: 25  LLHYSSITEAKLSYKERLR-NGIVDI--------------KVNDAIDLFESMIQSRPLPT 69

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
            + +N L   + R    ++     + M   GI  D+ T TIM+N  C+   L  A     
Sbjct: 70  PIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLG 129

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
              + G +PD   ++T + G    G  SEA  L + M+     PDL+T + L++GLC  G
Sbjct: 130 RAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKG 189

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            + EA  L+ +MV  GF PD +TY  +++   + G+     DLF  M  + +  ++V Y+
Sbjct: 190 RVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYS 249

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           ++I +    G  + A   F+EM++KGI+ +V+TY++LI GLC   + D    +  +M   
Sbjct: 250 IVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR 309

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            I+P+  T++ LI+     G   EA  LY EM+ R I PD  T+++L+
Sbjct: 310 NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLI 357



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 152/283 (53%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+ ++ K+  + +   ++N+M+  G+ PD    N +I          +A +++ +M   G
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
            +P IVTY+ +++S+CK   + + + L  E+  +G  PN +TYN L+ GF ++G+L  A+
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 440

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L ++M+  G+  S  +Y  ++ G  + G L +AL + E+M    +   +  YNI+I+G+
Sbjct: 441 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGM 500

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C   +V DA   F  +  K V PD+++YN ++ G C+ G++ EA +LF +++     P  
Sbjct: 501 CNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDD 560

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
            TYN LI        L  + +L E M   G   D  T  ++++
Sbjct: 561 FTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVID 603



 Score = 40.0 bits (92), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 55/119 (46%)

Query: 171 VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV 230
           + I I ++++      S V+    +F  +   G+ PDV   N +I  L   G   +A  +
Sbjct: 488 LGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADML 547

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           +R M E G  P   TYN ++ +      +  ++EL+ EM+  G S +  T  ++I   S
Sbjct: 548 FRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLS 606


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 143/489 (29%), Positives = 266/489 (54%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           GI+  + T   M++ +C++ ++  A  +L      G  P+ +T++ L+ GF   G + +A
Sbjct: 129 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 188

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L+  M+++  +    + + +I G   KG + EAL L + MV  G  P   TY  ++  
Sbjct: 189 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 248

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           LCK G  + A   F +M  +N+   ++ Y+ ++   C+ G+  +A  LF+E+  + +   
Sbjct: 249 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKAD 308

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           VVTY++LI GLC  G  +   ++   MI + I+PDV+T++ +++   K G L  A+E +N
Sbjct: 309 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN 368

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           EM+ +G+ PD   Y + I G  K     EA ++ + M++KG  PD++TY++L++  CK  
Sbjct: 369 EMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAK 428

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            +++   L R++   G IP+ ITY +++    + G L   ++LF  M+ +G+ P++VTY 
Sbjct: 429 RVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYG 488

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           +L+      G L  A   F +MQ   +   +  YN +I+G+C   ++D A+ LF  + ++
Sbjct: 489 ILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDK 548

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHA 717
           G+ P+  TY ++I   C  G+  EA  L+++M +    PD  T++ L+   L     + +
Sbjct: 549 GVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISS 608

Query: 718 VEYLESLTL 726
           VE +E + +
Sbjct: 609 VELIEEMKV 617



 Score =  268 bits (685), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 149/429 (34%), Positives = 237/429 (55%), Gaps = 1/429 (0%)

Query: 186 KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVT 245
           K  V + L++ ++M+  G  PD      ++  L  +G S  A +++R M E  IK S+V 
Sbjct: 217 KGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQ 276

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           Y+ ++DS CK+G   +AL L  EM+ +G   + VTY+ LI G   +G+ +    ++R+M+
Sbjct: 277 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 336

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
              +     +++ +I  + ++G L+EA  L  EM+TRG+AP   TYN LI G CK   + 
Sbjct: 337 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 396

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
           +A   F  M+ K   PDI++Y+ L+  YC++  + +   LF E+ S+ L+P  +TYNTL+
Sbjct: 397 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 456

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
            G C+ G L  A++L + M+++G+ P V+TY I+++G C  G L+ A E F +M +  + 
Sbjct: 457 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 516

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
                Y   I G        +A+ L   +  KG  PD++TYNV++ GLCK GSL EA+ L
Sbjct: 517 LGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADML 576

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
            RKM  DG  PD  TY  +I A L    L    +L   M   G S    T  ++I   + 
Sbjct: 577 FRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSD 636

Query: 606 RGRLELAFM 614
           R RL+ +F+
Sbjct: 637 R-RLDKSFL 644



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 144/465 (30%), Positives = 240/465 (51%), Gaps = 10/465 (2%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR-----EV 230
           + +++  Y +K  +     V  +  + G  PD    + ++     NGF ++ R      +
Sbjct: 137 MTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLV-----NGFCLEGRVSEAVAL 191

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
              M E   +P +VT +T+++  C +G + EAL L+  M   G  P+ VTY  ++    +
Sbjct: 192 VDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCK 251

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
           +G    A  L R M +  +K S   Y+ +I    + G   +AL+L  EM  +G+   + T
Sbjct: 252 SGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVT 311

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           Y+ LI GLC  G+  D      EM+ +N+IPD+++++ L+  + + G + EA  L++E+ 
Sbjct: 312 YSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI 371

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
           +R + P  +TYN+LIDG C+   L  A Q+ + M+++G  PD++TY+I++N  CK   + 
Sbjct: 372 TRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVD 431

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
                F E+  KGL P+   Y T + G  + G  + A  L +EM+++G PP ++TY +L+
Sbjct: 432 DGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 491

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
            GLC  G L +A E+  KM           Y  IIH       +     LF ++  KG+ 
Sbjct: 492 DGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVK 551

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALI 635
           P +VTY V+I     +G L  A M F +M+  G  P+  TYN LI
Sbjct: 552 PDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 596



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 129/432 (29%), Positives = 222/432 (51%)

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
           ++ +A++L   M      P  + +N L +  +R  + +   G  + M   G++   ++  
Sbjct: 79  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 138

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            +I  Y  K  L+ A ++       G  P   T++ L+ G C  GRVS+A      M+  
Sbjct: 139 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 198

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
              PD+++ +TL+ G C  G + EA +L D +      P  VTY  +++ LC+ G+  +A
Sbjct: 199 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 258

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
             L   M  + I   V+ Y+I+++  CK G+   A   FNEM  KG++ D   Y++ I G
Sbjct: 259 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 318

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
               G   +  ++  EM+ +   PD++T++ L+    K G L EA EL  +M+  G  PD
Sbjct: 319 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 378

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
            ITY S+I    +   L     +F+ M+ KG  P +VTY++LI+++    R++     F 
Sbjct: 379 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 438

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
           E+  KG+ PN ITYN L+ G C+  +++ A  LF +M   G+ P+  TY IL++  C+ G
Sbjct: 439 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 498

Query: 678 NWQEALRLYKEM 689
              +AL ++++M
Sbjct: 499 ELNKALEIFEKM 510



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 174/348 (50%), Gaps = 15/348 (4%)

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           L  +  +++A+  + E LR N I DI               + +A  LF+ +     +PT
Sbjct: 54  LLHYSSITEAKLSYKERLR-NGIVDI--------------KVNDAIDLFESMIQSRPLPT 98

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
            + +N L   + R    ++     + M   GI  D+ T TIM+N  C+   L  A     
Sbjct: 99  PIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLG 158

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
              + G +PD   ++T + G    G  SEA  L + M+     PDL+T + L++GLC  G
Sbjct: 159 RAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKG 218

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            + EA  L+ +MV  GF PD +TY  +++   + G+     DLF  M  + +  ++V Y+
Sbjct: 219 RVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYS 278

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           ++I +    G  + A   F+EM++KGI+ +V+TY++LI GLC   + D    +  +M   
Sbjct: 279 IVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR 338

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            I+P+  T++ LI+     G   EA  LY EM+ R I PD  T+++L+
Sbjct: 339 NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLI 386



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 95/355 (26%), Positives = 178/355 (50%), Gaps = 15/355 (4%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           AL  F  +E + G+K D   + +++  L   G       ++  ++  N+  I DV+    
Sbjct: 293 ALSLFNEMEMK-GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNI--IPDVVT--- 346

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
                       L+ ++ K+  + +   ++N+M+  G+ PD    N +I          +
Sbjct: 347 ---------FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE 397

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A +++ +M   G +P IVTY+ +++S+CK   + + + L  E+  +G  PN +TYN L+ 
Sbjct: 398 ANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVL 457

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           GF ++G+L  A+ L ++M+  G+  S  +Y  ++ G  + G L +AL + E+M    +  
Sbjct: 458 GFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTL 517

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
            +  YNI+I+G+C   +V DA   F  +  K V PD+++YN ++ G C+ G++ EA +LF
Sbjct: 518 GIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLF 577

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
            +++     P   TYN LI        L  + +L E M   G   D  T  ++++
Sbjct: 578 RKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVID 632


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 165/555 (29%), Positives = 277/555 (49%), Gaps = 3/555 (0%)

Query: 159 LDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL 218
           LD+L   GL   + +     LL+  ++  M    +  +++ML  G+ P++   N +I  L
Sbjct: 168 LDMLSQSGLR--MGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINAL 225

Query: 219 RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNG 278
             +G    A  + + + E  + P   TY +M+   C++ ++  AL++  +M   GC PN 
Sbjct: 226 CKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNT 285

Query: 279 VTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
           VTY+ LI G   +G + +A  LIR+M+  G+  +AH+    I    + G   +A  L  +
Sbjct: 286 VTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVD 345

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
           M  +G  P + TY  LI GLC  G +  A   F  M R  V P+ ++YN L+     +  
Sbjct: 346 MKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR 405

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           I  AF++ + +      P +VTYN +I G C  GD + A  +  NM+ +G   +++TY  
Sbjct: 406 IKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNT 465

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           ++ G C  GN + A    + M   G +PD ++YT  I G  K+     A+ L  EM+  G
Sbjct: 466 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 525

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
             P+ +TY  L+ G CK   L+ A  LL  M   G  P+  TY  +IH   +  +     
Sbjct: 526 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAE 585

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           +L   M+ +G+ P +VTYT +I      G   LA   F++M  +G  PN++TY++LI  L
Sbjct: 586 ELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 645

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
            +  ++++A  LF ++E  G++P++ TY  +I     +G  + A      M+    +P  
Sbjct: 646 GQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTL 705

Query: 699 CTHSALLLKQLDKDY 713
            T+  +L+K L  +Y
Sbjct: 706 WTY-GVLIKGLKNEY 719



 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 156/500 (31%), Positives = 244/500 (48%)

Query: 222 GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY 281
           G +    + Y  M   G++P+++ YN ++++ CK+G + +A  ++ ++     SP+  TY
Sbjct: 194 GMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTY 253

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
             +I G  R  +L+ A  +   M K G + +  +Y+ +I G  + G + EA +L  EM+ 
Sbjct: 254 TSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMIL 313

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
            G+ PT  T    I  LC  G   DA   F +M  K   P++ +Y  L+ G C SG +  
Sbjct: 314 HGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKV 373

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           A  LF  +    + P  VTYN LI+ L     ++ A  +   M   G  P+++TY  M+ 
Sbjct: 374 AIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIK 433

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
           G C +G+   A    N ML++G   +   Y T I G    G+T+ A R+ + M   G  P
Sbjct: 434 GYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKP 493

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           D  +Y  L+ G CK+  +E A  L  +MV DG  P+ +TYT++I    +   L     L 
Sbjct: 494 DEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLL 553

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
            +M R G  P + TY VLIH    +     A      M  +GI PNV+TY A+I+GLC+ 
Sbjct: 554 EHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKN 613

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
                A  +F  M E+G LPN  TY+ LI      G  +EA  L+ E+    + PD  T+
Sbjct: 614 GSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITY 673

Query: 702 SALLLKQLDKDYKVHAVEYL 721
             ++   +      HA  +L
Sbjct: 674 VKMIEAYIMSGKVEHAFNFL 693



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 181/642 (28%), Positives = 291/642 (45%), Gaps = 43/642 (6%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           AL+ F  +  + G + +   + T++  L +SG +  A+ ++  ++   +HGIL       
Sbjct: 269 ALQVFNQMAKE-GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI---LHGILPTA---- 320

Query: 167 LSSCVS--IKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS 224
             +C    I + D+           E    +F  M   G  P+V     +I  L  +G  
Sbjct: 321 -HTCTGPIIALCDM--------GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLL 371

Query: 225 VKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVL 284
             A  ++  M   G+ P+ VTYN +++   +   ++ A  +L  M   GCSPN VTYN +
Sbjct: 372 KVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEM 431

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           I G+   G+ ++A  ++ +ML+ G   +  +YN II GY + G    AL + + M   G 
Sbjct: 432 IKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGC 491

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
            P   +Y  LI G CK  ++  A   F EM+   + P+ ++Y  L+ GYC+   +  A  
Sbjct: 492 KPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATS 551

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
           L + ++     P V TYN LI GL +  +   A++L + MI +GI P+V+TYT M++G C
Sbjct: 552 LLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLC 611

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
           K G+ S+A E FN+M+ +G  P+   Y++ I    + G   EA  L  E+   G  PD I
Sbjct: 612 KNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEI 671

Query: 525 TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA----------------- 567
           TY  ++      G +E A   L +M+  G  P   TY  +I                   
Sbjct: 672 TYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPD 731

Query: 568 ---SLEMGDLRRGRDLFNNMLRK--GLSPTLVTYT--VLIHAHAARGRLELAFMYFSEMQ 620
              +   G     +D  + M  K   L P L       L+   +  GR   A      M 
Sbjct: 732 VVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMI 791

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
            +G+ P+   YN+L+  L R+R +D A G+F  M  +G   +   Y  LI   C     +
Sbjct: 792 SQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRK 851

Query: 681 EALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLE 722
           EA   ++ ML R   PD    + L+   L   YK   +E+L 
Sbjct: 852 EARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLH 893



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 156/324 (48%)

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
             D L    L   +  Y+ L+  L R G           M+++G+ P+++ Y  ++N  C
Sbjct: 167 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 226

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
           K GN++ A     ++    + PD F YT+ I G  +  D   A ++  +M  +G  P+ +
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 286

Query: 525 TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM 584
           TY+ L++GLC  G + EA +L+R+M+  G +P   T T  I A  +MG       LF +M
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 346

Query: 585 LRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRI 644
             KG  P + TYT LI      G L++A   F  M   G+ PN +TYNALIN L   RRI
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRI 406

Query: 645 DQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
             A+ +   M   G  PN  TY  +I   C  G+ ++A+ +   ML R    +  T++ +
Sbjct: 407 KYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTI 466

Query: 705 LLKQLDKDYKVHAVEYLESLTLGA 728
           +    D      A+  L+ +  G 
Sbjct: 467 IKGYCDSGNTTSALRILDLMRDGG 490



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 202/445 (45%), Gaps = 27/445 (6%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G K DE+ +  ++    +   + SA+            G+ + ++  GL  C +      
Sbjct: 490 GCKPDEWSYTELICGFCKISKMESAF------------GLFNEMVDDGL--CPNEVTYTA 535

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEF 237
           L+  Y K   ++    +   M R+G  P+V+  N +I  L + N FS  A E+ ++M E 
Sbjct: 536 LIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFS-GAEELCKVMIEE 594

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           GI P++VTY  M+D  CK G    ALE+  +M  +GC PN +TY+ LI    + G++E+A
Sbjct: 595 GIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEA 654

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L  ++ + GL     +Y  +I  Y   G +  A N    M+  G  PTL TY +LI G
Sbjct: 655 ENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG 714

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           L     ++D         R   +PD++   +  +GY ++ +     ++  +L   +   +
Sbjct: 715 LKNEYLLADQ--------RLAALPDVVPNCS--FGY-QTTDQDAVSVMSAKLAELDPGLS 763

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           V   N L+  L   G    A +L  +MI+QG+ PD   Y  ++    ++ N+ +A   F 
Sbjct: 764 VQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFK 823

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            M  +G +     Y   I    +L    EA    E ML + + PD +   VL+ GL + G
Sbjct: 824 HMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDG 883

Query: 538 SLEEANELLRKMVGDGFIPDHITYT 562
             +   E L  M    ++P    YT
Sbjct: 884 YKDLCMEFLHIMETRRYMPSFHIYT 908



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/305 (24%), Positives = 122/305 (40%), Gaps = 24/305 (7%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K       L +FNKM+  G LP++   + +I+ L   G   +A  ++  +   G+ P  +
Sbjct: 612 KNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEI 671

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR-GLIRD 303
           TY  M++++   G+++ A   L  M   GC P   TY VLI G      L   R   + D
Sbjct: 672 TYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPD 731

Query: 304 ML-----------------------KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV 340
           ++                       +L   +S    N ++   S  G   EA  L   M+
Sbjct: 732 VVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMI 791

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
           ++G+ P    YN L+  L +   V  A   F  M  +     +  Y  L+   C+     
Sbjct: 792 SQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRK 851

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           EA + F+ +  R   P  V    LIDGL R G  ++  +    M  +  +P    YTI+ 
Sbjct: 852 EARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILA 911

Query: 461 NGSCK 465
             + K
Sbjct: 912 REASK 916



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 69/133 (51%), Gaps = 2/133 (1%)

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM-YFSEMQVKGIRPNVITYN 632
           + R     + + + GL   L  Y+ L+  H +R  +  A M  +  M  +G++PN++ YN
Sbjct: 161 MARTMSFLDMLSQSGLRMGLFAYSALL-IHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYN 219

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
           A+IN LC+   +  A  +   + E  + P+ +TYT +I  +C   +   AL+++ +M   
Sbjct: 220 AVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKE 279

Query: 693 EIEPDYCTHSALL 705
             EP+  T+S L+
Sbjct: 280 GCEPNTVTYSTLI 292


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 165/555 (29%), Positives = 277/555 (49%), Gaps = 3/555 (0%)

Query: 159 LDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL 218
           LD+L   GL   + +     LL+  ++  M    +  +++ML  G+ P++   N +I  L
Sbjct: 338 LDMLSQSGLR--MGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINAL 395

Query: 219 RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNG 278
             +G    A  + + + E  + P   TY +M+   C++ ++  AL++  +M   GC PN 
Sbjct: 396 CKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNT 455

Query: 279 VTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
           VTY+ LI G   +G + +A  LIR+M+  G+  +AH+    I    + G   +A  L  +
Sbjct: 456 VTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVD 515

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
           M  +G  P + TY  LI GLC  G +  A   F  M R  V P+ ++YN L+     +  
Sbjct: 516 MKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR 575

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           I  AF++ + +    L   +VTYN +I G C  GD + A  +  NM+ +G   +++TY  
Sbjct: 576 IKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNT 635

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           ++ G C  GN + A    + M   G +PD ++YT  I G  K+     A+ L  EM+  G
Sbjct: 636 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 695

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
             P+ +TY  L+ G CK   L+ A  LL  M   G  P+  TY  +IH   +  +     
Sbjct: 696 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAE 755

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           +L   M+ +G+ P +VTYT +I      G   LA   F++M  +G  PN++TY++LI  L
Sbjct: 756 ELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 815

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
            +  ++++A  LF ++E  G++P++ TY  +I     +G  + A      M+    +P  
Sbjct: 816 GQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTL 875

Query: 699 CTHSALLLKQLDKDY 713
            T+  +L+K L  +Y
Sbjct: 876 WTY-GVLIKGLKNEY 889



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 155/500 (31%), Positives = 244/500 (48%)

Query: 222 GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY 281
           G +    + Y  M   G++P+++ YN ++++ CK+G + +A  ++ ++     SP+  TY
Sbjct: 364 GMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTY 423

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
             +I G  R  +L+ A  +   M K G + +  +Y+ +I G  + G + EA +L  EM+ 
Sbjct: 424 TSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMIL 483

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
            G+ PT  T    I  LC  G   DA   F +M  K   P++ +Y  L+ G C SG +  
Sbjct: 484 HGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKV 543

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           A  LF  +    + P  VTYN LI+ L     ++ A  +   M   G+  +++TY  M+ 
Sbjct: 544 AIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIK 603

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
           G C +G+   A    N ML++G   +   Y T I G    G+T+ A R+ + M   G  P
Sbjct: 604 GYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKP 663

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           D  +Y  L+ G CK+  +E A  L  +MV DG  P+ +TYT++I    +   L     L 
Sbjct: 664 DEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLL 723

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
            +M R G  P + TY VLIH    +     A      M  +GI PNV+TY A+I+GLC+ 
Sbjct: 724 EHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKN 783

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
                A  +F  M E+G LPN  TY+ LI      G  +EA  L+ E+    + PD  T+
Sbjct: 784 GSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITY 843

Query: 702 SALLLKQLDKDYKVHAVEYL 721
             ++   +      HA  +L
Sbjct: 844 VKMIEAYIMSGKVEHAFNFL 863



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 179/644 (27%), Positives = 287/644 (44%), Gaps = 47/644 (7%)

Query: 107  ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGIL---DVLI 163
            AL+ F  +  + G + +   + T++  L +SG +  A+ ++  ++   +HGIL       
Sbjct: 439  ALQVFNQMAKE-GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI---LHGILPTAHTCT 494

Query: 164  GGGLSSC------------VSIKILDLLLLIYTKKSMVEQCLL---------VFNKMLRN 202
            G  ++ C            V +K       +YT  +++    +         +F++M R+
Sbjct: 495  GPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRD 554

Query: 203  GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
            G+ P+    N +I +L +N     A  V  +MG  G+  +IVTYN M+  +C  G+ ++A
Sbjct: 555  GVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKA 614

Query: 263  LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
            + ++  M  RG S N VTYN +I G+  +G    A  ++  M   G K    SY  +ICG
Sbjct: 615  MLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICG 674

Query: 323  YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
            + +   +  A  L  EMV  G+ P   TY  LI G CK  ++  A      M R    P+
Sbjct: 675  FCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPN 734

Query: 383  IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
            + +YN L++G  +  N   A  L   +    + P VVTY  +IDGLC+ G   +A ++  
Sbjct: 735  VQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFN 794

Query: 443  NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
             MI QG LP+++TY+ ++    + G +  A   F E+ R GL PD   Y   I   +  G
Sbjct: 795  KMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSG 854

Query: 503  DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
                A+     M+  G  P L TY VL+ GL         NE L        +PD +   
Sbjct: 855  KVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL--------KNEYLLADQRLAALPDVVPNC 906

Query: 563  SIIHASLEMGDLRRGRDLFNNMLRK--GLSPTLVTYT--VLIHAHAARGRLELAFMYFSE 618
            S  + + +       +D  + M  K   L P L       L+   +  GR   A      
Sbjct: 907  SFGYQTTD-------QDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGS 959

Query: 619  MQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGN 678
            M  +G+ P+   YN+L+  L R+R +D A G+F  M  +G   +   Y  LI   C    
Sbjct: 960  MISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHR 1019

Query: 679  WQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLE 722
             +EA   ++ ML R   PD    + L+   L   YK   +E+L 
Sbjct: 1020 RKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLH 1063



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 152/520 (29%), Positives = 241/520 (46%), Gaps = 24/520 (4%)

Query: 177  DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
            + L+ I  +   ++   +V N M RNGL  ++   N +IK     G   KA  V   M +
Sbjct: 564  NALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQ 623

Query: 237  FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
             G   ++VTYNT++  +C  G    AL +L  M+  GC P+  +Y  LI GF +  ++E 
Sbjct: 624  RGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMES 683

Query: 297  ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
            A GL  +M+  GL  +  +Y  +I GY +   L  A +L E M   G  P + TYN+LI+
Sbjct: 684  AFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIH 743

Query: 357  GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
            GL K    S A      M+ + + P++++Y  ++ G C++G+   A  +F+++  +  +P
Sbjct: 744  GLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLP 803

Query: 417  TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
             ++TY++LI  L + G +E A+ L   +   G++PD ITY  M+      G +  A  F 
Sbjct: 804  NLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFL 863

Query: 477  NEMLRKGLQPDRFAYTTQIAG---ELKLGDT--------------------SEAYRLQEE 513
              M++ G QP  + Y   I G   E  L D                      +A  +   
Sbjct: 864  GRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSA 923

Query: 514  MLAKGFPP-DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
             LA+  P   +   N LV  L   G   EANELL  M+  G  PD   Y S++ + L + 
Sbjct: 924  KLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVR 983

Query: 573  DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
            ++     +F +M  +G    L  Y  LI A     R + A + F  M ++   P+ +   
Sbjct: 984  NVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQA 1043

Query: 633  ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
             LI+GL R    D        ME    +P+ + YTIL  E
Sbjct: 1044 VLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILARE 1083



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 156/324 (48%)

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
             D L    L   +  Y+ L+  L R G           M+++G+ P+++ Y  ++N  C
Sbjct: 337 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 396

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
           K GN++ A     ++    + PD F YT+ I G  +  D   A ++  +M  +G  P+ +
Sbjct: 397 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 456

Query: 525 TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM 584
           TY+ L++GLC  G + EA +L+R+M+  G +P   T T  I A  +MG       LF +M
Sbjct: 457 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 516

Query: 585 LRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRI 644
             KG  P + TYT LI      G L++A   F  M   G+ PN +TYNALIN L   RRI
Sbjct: 517 KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRI 576

Query: 645 DQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
             A+ +   M   G+  N  TY  +I   C  G+ ++A+ +   ML R    +  T++ +
Sbjct: 577 KYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTI 636

Query: 705 LLKQLDKDYKVHAVEYLESLTLGA 728
           +    D      A+  L+ +  G 
Sbjct: 637 IKGYCDSGNTTSALRILDLMRDGG 660



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 202/445 (45%), Gaps = 27/445 (6%)

Query: 119  GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
            G K DE+ +  ++    +   + SA+            G+ + ++  GL  C +      
Sbjct: 660  GCKPDEWSYTELICGFCKISKMESAF------------GLFNEMVDDGL--CPNEVTYTA 705

Query: 179  LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEF 237
            L+  Y K   ++    +   M R+G  P+V+  N +I  L + N FS  A E+ ++M E 
Sbjct: 706  LIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFS-GAEELCKVMIEE 764

Query: 238  GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
            GI P++VTY  M+D  CK G    ALE+  +M  +GC PN +TY+ LI    + G++E+A
Sbjct: 765  GIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEA 824

Query: 298  RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
              L  ++ + GL     +Y  +I  Y   G +  A N    M+  G  PTL TY +LI G
Sbjct: 825  ENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG 884

Query: 358  LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
            L     ++D         R   +PD++   +  +GY ++ +     ++  +L   +   +
Sbjct: 885  LKNEYLLADQ--------RLAALPDVVPNCS--FGY-QTTDQDAVSVMSAKLAELDPGLS 933

Query: 418  VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
            V   N L+  L   G    A +L  +MI+QG+ PD   Y  ++    ++ N+ +A   F 
Sbjct: 934  VQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFK 993

Query: 478  EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
             M  +G +     Y   I    +L    EA    E ML + + PD +   VL+ GL + G
Sbjct: 994  HMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDG 1053

Query: 538  SLEEANELLRKMVGDGFIPDHITYT 562
              +   E L  M    ++P    YT
Sbjct: 1054 YKDLCMEFLHIMETRRYMPSFHIYT 1078



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/305 (24%), Positives = 122/305 (40%), Gaps = 24/305 (7%)

Query: 185  KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
            K       L +FNKM+  G LP++   + +I+ L   G   +A  ++  +   G+ P  +
Sbjct: 782  KNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEI 841

Query: 245  TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR-GLIRD 303
            TY  M++++   G+++ A   L  M   GC P   TY VLI G      L   R   + D
Sbjct: 842  TYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPD 901

Query: 304  ML-----------------------KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV 340
            ++                       +L   +S    N ++   S  G   EA  L   M+
Sbjct: 902  VVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMI 961

Query: 341  TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
            ++G+ P    YN L+  L +   V  A   F  M  +     +  Y  L+   C+     
Sbjct: 962  SQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRK 1021

Query: 401  EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
            EA + F+ +  R   P  V    LIDGL R G  ++  +    M  +  +P    YTI+ 
Sbjct: 1022 EARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILA 1081

Query: 461  NGSCK 465
              + K
Sbjct: 1082 REASK 1086



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 69/133 (51%), Gaps = 2/133 (1%)

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM-YFSEMQVKGIRPNVITYN 632
           + R     + + + GL   L  Y+ L+  H +R  +  A M  +  M  +G++PN++ YN
Sbjct: 331 MARTMSFLDMLSQSGLRMGLFAYSALL-IHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYN 389

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
           A+IN LC+   +  A  +   + E  + P+ +TYT +I  +C   +   AL+++ +M   
Sbjct: 390 AVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKE 449

Query: 693 EIEPDYCTHSALL 705
             EP+  T+S L+
Sbjct: 450 GCEPNTVTYSTLI 462


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 158/478 (33%), Positives = 251/478 (52%), Gaps = 20/478 (4%)

Query: 193 LLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDS 252
           L  F +M RNG LP+V   N +I        + +A    R MG  G++P+++T+N +++ 
Sbjct: 3   LRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIING 62

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
            C++G ++E  E+L EM  +G  P+ VTYN L+ G+ + G   QA  L  +M++ GL  +
Sbjct: 63  LCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPN 122

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
             +Y  +I    + G L  A+   ++M  RG+ P   TY  +I G  + G + +A     
Sbjct: 123 VVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLN 182

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
           EM R   IP I++YN L+ G+C  G + EA  L  ++  + ++P VV+Y+T+I G  R  
Sbjct: 183 EMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQ 242

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
           +L+ A Q+K  MI + +LPD +TY+ ++ G C+   L+ A + F EML   L PD F YT
Sbjct: 243 ELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYT 302

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
           T I    K GD ++A  L +EM+ KGF PD +TYNVL++GL K    +EA  LL K+  D
Sbjct: 303 TLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYD 362

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
             IP  +TY ++I     +                       +   L+     +G ++ A
Sbjct: 363 DSIPSAVTYNTLIENCCNI--------------------EFKSAVALVKGFCMKGLMDEA 402

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
              F  M  K  +PN   YN +I+G CR+  + +AY L+ +M     +P+  T   L+
Sbjct: 403 DQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALV 460



 Score =  265 bits (678), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 149/459 (32%), Positives = 241/459 (52%), Gaps = 15/459 (3%)

Query: 262 ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC 321
            L    EM+  GC PN VTYN +I G+ +    ++A G +R M   GL+ +  ++N II 
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           G    G L E   +  EM  +G  P   TYN L+ G CK G    A     EM+R  + P
Sbjct: 62  GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           ++++Y +L+   C++GN+  A   FD++  R L P   TY T+I+G  + G L+ A ++ 
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVL 181

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
             M   G +P ++TY  ++NG C +G +  A     +M+ KG+ PD  +Y+T I+G  + 
Sbjct: 182 NEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARN 241

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
            +   A++++ EM+ K   PD +TY+ L+ GLC+   L EA ++ ++M+     PD  TY
Sbjct: 242 QELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTY 301

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
           T++I+A  + GDL +   L + M++KG  P  VTY VLI+    + R + A     ++  
Sbjct: 302 TTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFY 361

Query: 622 KGIRPNVITYN---------------ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
               P+ +TYN               AL+ G C    +D+A  +F  M  +   PN+  Y
Sbjct: 362 DDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIY 421

Query: 667 TILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            ++I+ +C  GN  +A +LYKEM+  +  P   T  AL+
Sbjct: 422 NVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALV 460



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 137/378 (36%), Positives = 207/378 (54%)

Query: 337 EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS 396
           +EM   G  P + TYN +I G CK  R  +A      M  K + P++I++N ++ G CR 
Sbjct: 7   KEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRD 66

Query: 397 GNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
           G + E   +  E+  +  VP  VTYNTL++G C+ G+   A  L   M+  G+ P+V+TY
Sbjct: 67  GRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTY 126

Query: 457 TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA 516
           T ++N  CK GNL+ A EFF++M  +GL P+   YTT I G  + G   EAYR+  EM  
Sbjct: 127 TSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTR 186

Query: 517 KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
            GF P ++TYN L++G C LG +EEA  LL+ MVG G +PD ++Y++II       +L R
Sbjct: 187 SGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDR 246

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
              +   M+ K + P  VTY+ LI     + RL  A   F EM    + P+  TY  LIN
Sbjct: 247 AFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLIN 306

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
             C+   +++A  L  +M ++G LP+  TY +LIN        +EA RL  ++   +  P
Sbjct: 307 AYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIP 366

Query: 697 DYCTHSALLLKQLDKDYK 714
              T++ L+    + ++K
Sbjct: 367 SAVTYNTLIENCCNIEFK 384



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 158/506 (31%), Positives = 243/506 (48%), Gaps = 27/506 (5%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K    ++       M   GL P++   N II  L  +G   +  EV   M   G  P 
Sbjct: 28  YCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEVLVEMSRKGYVPD 87

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            VTYNT+++ +CKEG   +AL L  EM   G SPN VTY  LI    + G L +A     
Sbjct: 88  EVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFD 147

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M   GL  +  +Y  II G++++GLL EA  +  EM   G  P++ TYN LI G C  G
Sbjct: 148 QMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLG 207

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R+ +A     +M+ K V+PD++SY+T++ G+ R+  +  AF +  E+  ++++P  VTY+
Sbjct: 208 RMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYS 267

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           +LI GLC    L  A  + + M+   + PD  TYT ++N  CK G+L+ A    +EM++K
Sbjct: 268 SLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQK 327

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN--------------- 527
           G  PD   Y   I G  K   + EA RL  ++      P  +TYN               
Sbjct: 328 GFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAV 387

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
            LV G C  G ++EA+++   M+     P+   Y  IIH    +G++ +   L+  M+  
Sbjct: 388 ALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHV 447

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG--IRPNVITYNALINGLCRLRR-- 643
              P  VT   L+ A    G      M     +V G  +R   +T   L   L  + +  
Sbjct: 448 DFVPHTVTVLALVKALFTEG------MDGELNEVIGDILRSCKLTDAELSKVLVEINQKE 501

Query: 644 --IDQAYGLFIDMEEEGILPNKYTYT 667
             +D  + L  +M ++G++P+  T T
Sbjct: 502 GNMDMVFNLLTEMAKDGLIPSTGTPT 527



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 133/433 (30%), Positives = 208/433 (48%), Gaps = 50/433 (11%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K+    Q L++  +M+RNGL P+V     +I  +   G   +A E +  M   G+ P+
Sbjct: 98  YCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPN 157

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             TY T+++ F ++G + EA  +L EM   G  P+ VTYN LI G    G +E+A GL++
Sbjct: 158 ERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQ 217

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           DM+  G+     SY+ II G++    L  A  ++ EM+ + V P   TY+ LI GLC+  
Sbjct: 218 DMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQR 277

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R+++A   F EML   + PD  +Y TL+  YC+ G++ +A  L DE+  +  +P  VTYN
Sbjct: 278 RLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYN 337

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM---------------VNGSCKMG 467
            LI+GL +    + A++L   +     +P  +TY  +               V G C  G
Sbjct: 338 VLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKG 397

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
            +  A + F  M+ K  +P+   Y   I G  ++G+  +AY+L +EM+   F P  +T  
Sbjct: 398 LMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVL 457

Query: 528 VLVHGL-------------------CKL----------------GSLEEANELLRKMVGD 552
            LV  L                   CKL                G+++    LL +M  D
Sbjct: 458 ALVKALFTEGMDGELNEVIGDILRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKD 517

Query: 553 GFIPDHITYTSII 565
           G IP   T T+ I
Sbjct: 518 GLIPSTGTPTNAI 530



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 89/250 (35%), Positives = 146/250 (58%), Gaps = 5/250 (2%)

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
           M   FF EM R G  P+   Y T I G  KL  T EA+     M  KG  P+LIT+N+++
Sbjct: 1   MGLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMII 60

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
           +GLC+ G L+E +E+L +M   G++PD +TY ++++   + G+  +   L   M+R GLS
Sbjct: 61  NGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLS 120

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           P +VTYT LI++    G L  A  +F +M V+G+ PN  TY  +ING  +   +D+AY +
Sbjct: 121 PNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRV 180

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL---- 706
             +M   G +P+  TY  LIN +C  G  +EA+ L ++M+ + + PD  ++S ++     
Sbjct: 181 LNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFAR 240

Query: 707 -KQLDKDYKV 715
            ++LD+ +++
Sbjct: 241 NQELDRAFQM 250



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 82/148 (55%)

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
           G   F  M R G  P +VTY  +I  +    R + AF +   M +KG+ PN+IT+N +IN
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
           GLCR  R+ +   + ++M  +G +P++ TY  L+N  C  GN+ +AL L+ EM+   + P
Sbjct: 62  GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121

Query: 697 DYCTHSALLLKQLDKDYKVHAVEYLESL 724
           +  T+++L+           A+E+ + +
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQM 149



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 102/242 (42%), Gaps = 20/242 (8%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  Y K+  + + L + ++M++ G LPD    N +I  L     S +AR +   +    
Sbjct: 304 LINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDD 363

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
             PS VTYNT++++ C   E + A+                    L+ GF   G +++A 
Sbjct: 364 SIPSAVTYNTLIENCCNI-EFKSAV-------------------ALVKGFCMKGLMDEAD 403

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            +   M+    K +   YN II G+   G +++A  L +EMV     P   T   L+  L
Sbjct: 404 QVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKAL 463

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
              G   +      ++LR   + D      L+    + GN+   F L  E+    L+P+ 
Sbjct: 464 FTEGMDGELNEVIGDILRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGLIPST 523

Query: 419 VT 420
            T
Sbjct: 524 GT 525


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 165/555 (29%), Positives = 277/555 (49%), Gaps = 3/555 (0%)

Query: 159 LDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL 218
           LD+L   GL   + +     LL+  ++  M    +  +++ML  G+ P++   N +I  L
Sbjct: 168 LDMLSQSGLR--MGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINAL 225

Query: 219 RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNG 278
             +G    A  + + + E  + P   TY +M+   C++ ++  AL++  +M   GC PN 
Sbjct: 226 CKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNT 285

Query: 279 VTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
           VTY+ LI G   +G + +A  LIR+M+  G+  +AH+    I    + G   +A  L  +
Sbjct: 286 VTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVD 345

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
           M  +G  P + TY  LI GLC  G +  A   F  M R  V P+ ++YN L+     +  
Sbjct: 346 MKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR 405

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           I  AF++ + +      P +VTYN +I G C  GD + A  +  NM+ +G   +++TY  
Sbjct: 406 IKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNT 465

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           ++ G C  GN + A    + M   G +PD ++YT  I G  K+     A+ L  EM+  G
Sbjct: 466 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 525

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
             P+ +TY  L+ G CK   L+ A  LL  M   G  P+  TY  +IH   +  +     
Sbjct: 526 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAE 585

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           +L   M+ +G+ P +VTYT +I      G   LA   F++M  +G  PN++TY++LI  L
Sbjct: 586 ELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 645

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
            +  ++++A  LF ++E  G++P++ TY  +I     +G  + A      M+    +P  
Sbjct: 646 GQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTL 705

Query: 699 CTHSALLLKQLDKDY 713
            T+  +L+K L  +Y
Sbjct: 706 WTY-GVLIKGLKNEY 719



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 156/500 (31%), Positives = 244/500 (48%)

Query: 222 GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY 281
           G +    + Y  M   G++P+++ YN ++++ CK+G + +A  ++ ++     SP+  TY
Sbjct: 194 GMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTY 253

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
             +I G  R  +L+ A  +   M K G + +  +Y+ +I G  + G + EA +L  EM+ 
Sbjct: 254 TSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMIL 313

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
            G+ PT  T    I  LC  G   DA   F +M  K   P++ +Y  L+ G C SG +  
Sbjct: 314 HGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKV 373

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           A  LF  +    + P  VTYN LI+ L     ++ A  +   M   G  P+++TY  M+ 
Sbjct: 374 AIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIK 433

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
           G C +G+   A    N ML++G   +   Y T I G    G+T+ A R+ + M   G  P
Sbjct: 434 GYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKP 493

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           D  +Y  L+ G CK+  +E A  L  +MV DG  P+ +TYT++I    +   L     L 
Sbjct: 494 DEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLL 553

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
            +M R G  P + TY VLIH    +     A      M  +GI PNV+TY A+I+GLC+ 
Sbjct: 554 EHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKN 613

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
                A  +F  M E+G LPN  TY+ LI      G  +EA  L+ E+    + PD  T+
Sbjct: 614 GSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITY 673

Query: 702 SALLLKQLDKDYKVHAVEYL 721
             ++   +      HA  +L
Sbjct: 674 VKMIEAYIMSGKVEHAFNFL 693



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 181/642 (28%), Positives = 291/642 (45%), Gaps = 43/642 (6%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           AL+ F  +  + G + +   + T++  L +SG +  A+ ++  ++   +HGIL       
Sbjct: 269 ALQVFNQMAKE-GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI---LHGILPTA---- 320

Query: 167 LSSCVS--IKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS 224
             +C    I + D+           E    +F  M   G  P+V     +I  L  +G  
Sbjct: 321 -HTCTGPIIALCDM--------GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGIL 371

Query: 225 VKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVL 284
             A  ++  M   G+ P+ VTYN +++   +   ++ A  +L  M   GCSPN VTYN +
Sbjct: 372 KVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEM 431

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           I G+   G+ ++A  ++ +ML+ G   +  +YN II GY + G    AL + + M   G 
Sbjct: 432 IKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGC 491

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
            P   +Y  LI G CK  ++  A   F EM+   + P+ ++Y  L+ GYC+   +  A  
Sbjct: 492 KPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATS 551

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
           L + ++     P V TYN LI GL +  +   A++L + MI +GI P+V+TYT M++G C
Sbjct: 552 LLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLC 611

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
           K G+ S+A E FN+M+ +G  P+   Y++ I    + G   EA  L  E+   G  PD I
Sbjct: 612 KNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEI 671

Query: 525 TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA----------------- 567
           TY  ++      G +E A   L +M+  G  P   TY  +I                   
Sbjct: 672 TYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPD 731

Query: 568 ---SLEMGDLRRGRDLFNNMLRK--GLSPTLVTYT--VLIHAHAARGRLELAFMYFSEMQ 620
              +   G     +D  + M  K   L P L       L+   +  GR   A      M 
Sbjct: 732 VVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMI 791

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
            +G+ P+   YN+L+  L R+R +D A G+F  M  +G   +   Y  LI   C     +
Sbjct: 792 SQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRK 851

Query: 681 EALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLE 722
           EA   ++ ML R   PD    + L+   L   YK   +E+L 
Sbjct: 852 EARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLH 893



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 156/324 (48%)

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
             D L    L   +  Y+ L+  L R G           M+++G+ P+++ Y  ++N  C
Sbjct: 167 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 226

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
           K GN++ A     ++    + PD F YT+ I G  +  D   A ++  +M  +G  P+ +
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 286

Query: 525 TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM 584
           TY+ L++GLC  G + EA +L+R+M+  G +P   T T  I A  +MG       LF +M
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 346

Query: 585 LRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRI 644
             KG  P + TYT LI      G L++A   F  M   G+ PN +TYNALIN L   RRI
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRI 406

Query: 645 DQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
             A+ +   M   G  PN  TY  +I   C  G+ ++A+ +   ML R    +  T++ +
Sbjct: 407 KYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTI 466

Query: 705 LLKQLDKDYKVHAVEYLESLTLGA 728
           +    D      A+  L+ +  G 
Sbjct: 467 IKGYCDSGNTTSALRILDLMRDGG 490



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 202/445 (45%), Gaps = 27/445 (6%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G K DE+ +  ++    +   + SA+            G+ + ++  GL  C +      
Sbjct: 490 GCKPDEWSYTELICGFCKISKMESAF------------GLFNEMVDDGL--CPNEVTYTA 535

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEF 237
           L+  Y K   ++    +   M R+G  P+V+  N +I  L + N FS  A E+ ++M E 
Sbjct: 536 LIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFS-GAEELCKVMIEE 594

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           GI P++VTY  M+D  CK G    ALE+  +M  +GC PN +TY+ LI    + G++E+A
Sbjct: 595 GIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEA 654

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L  ++ + GL     +Y  +I  Y   G +  A N    M+  G  PTL TY +LI G
Sbjct: 655 ENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG 714

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           L     ++D         R   +PD++   +  +GY ++ +     ++  +L   +   +
Sbjct: 715 LKNEYLLADQ--------RLAALPDVVPNCS--FGY-QTTDQDAVSVMSAKLAELDPGLS 763

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           V   N L+  L   G    A +L  +MI+QG+ PD   Y  ++    ++ N+ +A   F 
Sbjct: 764 VQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFK 823

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            M  +G +     Y   I    +L    EA    E ML + + PD +   VL+ GL + G
Sbjct: 824 HMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDG 883

Query: 538 SLEEANELLRKMVGDGFIPDHITYT 562
             +   E L  M    ++P    YT
Sbjct: 884 YKDLCMEFLHIMETRRYMPSFHIYT 908



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/305 (24%), Positives = 122/305 (40%), Gaps = 24/305 (7%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K       L +FNKM+  G LP++   + +I+ L   G   +A  ++  +   G+ P  +
Sbjct: 612 KNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEI 671

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR-GLIRD 303
           TY  M++++   G+++ A   L  M   GC P   TY VLI G      L   R   + D
Sbjct: 672 TYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPD 731

Query: 304 ML-----------------------KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV 340
           ++                       +L   +S    N ++   S  G   EA  L   M+
Sbjct: 732 VVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMI 791

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
           ++G+ P    YN L+  L +   V  A   F  M  +     +  Y  L+   C+     
Sbjct: 792 SQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRK 851

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           EA + F+ +  R   P  V    LIDGL R G  ++  +    M  +  +P    YTI+ 
Sbjct: 852 EARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILA 911

Query: 461 NGSCK 465
             + K
Sbjct: 912 REASK 916



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 69/133 (51%), Gaps = 2/133 (1%)

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM-YFSEMQVKGIRPNVITYN 632
           + R     + + + GL   L  Y+ L+  H +R  +  A M  +  M  +G++PN++ YN
Sbjct: 161 MARTMSFLDMLSQSGLRMGLFAYSALL-IHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYN 219

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
           A+IN LC+   +  A  +   + E  + P+ +TYT +I  +C   +   AL+++ +M   
Sbjct: 220 AVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKE 279

Query: 693 EIEPDYCTHSALL 705
             EP+  T+S L+
Sbjct: 280 GCEPNTVTYSTLI 292


>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
 gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 187/664 (28%), Positives = 320/664 (48%), Gaps = 26/664 (3%)

Query: 76  NRWVSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILI 135
           NR  S H         L   +L R+R  P   L FF         +     +  +L IL 
Sbjct: 53  NRPQSLHNLTFKYSDHLTDSLLRRLRLHPSACLSFFHLATQNSHYRPHSLSYSILLHILT 112

Query: 136 ESGLLRSAYWVVETVV---CVN-------MHGILDVLIGGGLSSCVSIKILDLLLLIYTK 185
            + L   A  V+  ++   C N        + +  V    G  S     + D+L+  + +
Sbjct: 113 HARLFPEATTVLRQLMDLHCTNNYRAYAVCNHVFSVYKEFGFCS----GVFDMLMKAFAE 168

Query: 186 KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVT 245
           + M +  L VF++M R G +P +++C+ ++  L   G    A  V+  +   GI P +  
Sbjct: 169 RGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIVGTGIVPDVYM 228

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
            + ++++ C+ G +  A+E+L +M   G  PN VTYN L+ G+   G+ E    ++R M 
Sbjct: 229 CSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMS 288

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNL-----EEEMVTRGVAPTLATYNILIYGLCK 360
           + G+  +  +   ++ GY +KG + EA  L     E+E+    +      Y +L+ G C+
Sbjct: 289 ERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDEL----LVVDERVYGVLVDGYCQ 344

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            GR+ DA     EMLR  +  +++  NTL+ GYC+ G + EA  +F  +   NL P   +
Sbjct: 345 MGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYS 404

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YNTL+DG CR G +  A  L E M+  GI P V+TY  ++ G   +G+   A   ++ M+
Sbjct: 405 YNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMV 464

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            +G+ P+  +  T +    K+GD+  A  L +E+L +GF    + +N ++ GLCK+G L 
Sbjct: 465 ERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLM 524

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA  +  +M   G  PD ITY ++     + G+++    +   M R+ +S ++  Y  LI
Sbjct: 525 EAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLI 584

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                  +L        EMQ +G+ PNV+TY  LI+G C  +++D+A+ L+ +M E G  
Sbjct: 585 DGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFT 644

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
           PN    + +++         EA  +  +MLD +I      H+    K +  D  + A + 
Sbjct: 645 PNVVVCSKIVSSLYRDDRISEATVILDKMLDFDI---LAVHNKCSDKLVKNDLTLEAQKI 701

Query: 721 LESL 724
            +SL
Sbjct: 702 ADSL 705



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 181/643 (28%), Positives = 293/643 (45%), Gaps = 108/643 (16%)

Query: 158 ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
           + D ++G G+     + +  +++  + +   V+  + V  KM++ GL P+V   N ++  
Sbjct: 213 VFDQIVGTGIVP--DVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNG 270

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQ------- 270
               G       V R+M E G+  ++VT   ++  +CK+G+M EA +LL E++       
Sbjct: 271 YVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVV 330

Query: 271 ---------------GR--------------GCSPNGVTYNVLITGFSRNGELEQARGLI 301
                          GR              G   N V  N LI G+ + G++ +A  + 
Sbjct: 331 DERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVF 390

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
             M+   LK   +SYN ++ GY  +G + +A  L EEM+  G+ PT+ TYN +I GL   
Sbjct: 391 VGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDV 450

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           G   DA H +  M+ + V P+ IS  T+L  + + G+   A +L+ E+  R    + V +
Sbjct: 451 GSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAF 510

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN------------- 468
           NT+I GLC+ G L  A  + + M   G+ PD ITY  + +G CK GN             
Sbjct: 511 NTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMER 570

Query: 469 --LSMAREFFN--------------------EMLRKGLQPDRFAYTTQIAGELKLGDTSE 506
             +S + E +N                    EM  +GL P+   Y T I+G        +
Sbjct: 571 QAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDK 630

Query: 507 AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM----------------- 549
           A+ L  EM+ +GF P+++  + +V  L +   + EA  +L KM                 
Sbjct: 631 AFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLV 690

Query: 550 ----------VGDGF--------IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
                     + D          + ++I Y   I    + G L   R + + ++ +G  P
Sbjct: 691 KNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLP 750

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
              TY  LIHA +  G ++ AF    EM  KG+ PN+  YNALINGLC+L  ID+A  LF
Sbjct: 751 DNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLF 810

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
             + ++G++PN  TY ILI   C  G+  +A RL ++M +  I
Sbjct: 811 YKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGI 853



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 132/451 (29%), Positives = 225/451 (49%), Gaps = 35/451 (7%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL  Y ++  V +  ++  +ML +G+ P V   N +IK L D G    A  ++ +M E G
Sbjct: 408 LLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERG 467

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           + P+ ++  TMLD F K G+   A+ L  E+ GRG + + V +N +I+G  + G+L +A 
Sbjct: 468 VTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAG 527

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            +   M +LGL     +Y  +  GY + G + EA  ++  M  + ++ ++  YN LI GL
Sbjct: 528 AVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGL 587

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
            K  +++D      EM  + + P++++Y TL+ G+C    + +AF L+ E+  R   P V
Sbjct: 588 FKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNV 647

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILP--------------------------- 451
           V  + ++  L R   +  A  + + M++  IL                            
Sbjct: 648 VVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDK 707

Query: 452 --------DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
                   + I Y I ++G CK G L  AR   + ++ +G  PD F Y T I      G+
Sbjct: 708 SDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGN 767

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
             EA++L++EML KG  P++  YN L++GLCKLG+++ A  L  K+   G +P+ +TY  
Sbjct: 768 VDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNI 827

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           +I     +GDL +   L   M  +G+S  ++
Sbjct: 828 LIGCYCRIGDLDKASRLREKMTEEGISTRII 858



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 150/529 (28%), Positives = 246/529 (46%), Gaps = 70/529 (13%)

Query: 171 VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV 230
           V  ++  +L+  Y +   +E  + + ++MLR GL  ++  CN +IK     G   +A  V
Sbjct: 330 VDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERV 389

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
           +  M ++ +KP   +YNT+LD +C+EG++ +A  L  EM G G +P  VTYN +I G   
Sbjct: 390 FVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVD 449

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
            G  + A  L   M++ G+  +  S   ++  + + G    A+ L +E++ RG   +   
Sbjct: 450 VGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVA 509

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL------ 404
           +N +I GLCK G++ +A   F  M    + PD I+Y TL  GYC++GN+ EAF       
Sbjct: 510 FNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVME 569

Query: 405 -----------------------------LFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
                                        L  E+++R L P VVTY TLI G C    L+
Sbjct: 570 RQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLD 629

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG------------ 483
            A  L   MI +G  P+V+  + +V+   +   +S A    ++ML               
Sbjct: 630 KAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKL 689

Query: 484 ------LQPDRFA-----------------YTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
                 L+  + A                 Y   I G  K G   EA  +   ++++GF 
Sbjct: 690 VKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFL 749

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           PD  TY  L+H     G+++EA +L  +M+  G IP+   Y ++I+   ++G++ R + L
Sbjct: 750 PDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRL 809

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
           F  + +KGL P  VTY +LI  +   G L+ A     +M  +GI   +I
Sbjct: 810 FYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGISTRII 858


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 175/572 (30%), Positives = 280/572 (48%), Gaps = 69/572 (12%)

Query: 104 PRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLI 163
           P + LR+F W   +  V     + C +L +L  +                 +  ILD  +
Sbjct: 87  PLLVLRYFNWSRRELNVNYSIELICRLLNLLANAKHYPK------------IRSILDSFV 134

Query: 164 GGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGF 223
            G  +  +S        LI+   S+         +   N ++ D+     ++    +N  
Sbjct: 135 KGETNCSIS--------LIFHSLSVCS------GQFCANSIIADM-----LVLAYVENSK 175

Query: 224 SVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNV 283
           +V   E ++  G++  K S+++ N +L +  KE E      +  EM  R  SPN +T+N 
Sbjct: 176 TVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNT 235

Query: 284 LITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG 343
           +I                                    G  + G L +A ++ ++M   G
Sbjct: 236 VIN-----------------------------------GLCKVGKLNKAGDVVDDMKVWG 260

Query: 344 VAPTLATYNILIYGLCKWGRVSD---ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
             P + TYN LI G CK GRV     A     EM+   V P+ +++N L+ G+C+  N+ 
Sbjct: 261 FWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLS 320

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
            A  +F+E++S+ L PTVVTYN+L++GLC  G L  A+ L + M++  + P+VITY  ++
Sbjct: 321 AALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALI 380

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
           NG CK   L  ARE F+ + ++GL P+   + T + G  K G   EA+ LQ+ ML KGF 
Sbjct: 381 NGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFL 440

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           P+  TYN L+ G C+ G +EE   LL +M   G   D +TY  +I A  E  + ++   L
Sbjct: 441 PNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARL 500

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
            + ML KGL P+ +TY +L++ +   G L  A     +M+ +G   NV+TYN LI G CR
Sbjct: 501 IDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCR 560

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
             +++ A GL  +M E+G++PN+ TY I+  E
Sbjct: 561 KGKLEDANGLLNEMLEKGLIPNRTTYEIIKEE 592



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 140/384 (36%), Positives = 215/384 (55%), Gaps = 3/384 (0%)

Query: 194 LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
            V+ +M+R  + P++   N +I  L   G   KA +V   M  +G  P++VTYNT++D +
Sbjct: 216 FVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGY 275

Query: 254 CKEG---EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
           CK G   +M +A  +L EM     SPN VT+NVLI GF ++  L  A  +  +M   GLK
Sbjct: 276 CKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLK 335

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
            +  +YN ++ G   +G L EA  L +EM++  + P + TYN LI G CK   + +AR  
Sbjct: 336 PTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEAREL 395

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
           F  + ++ + P++I++NTLL+GYC+ G + EAFLL   +  +  +P   TYN LI G CR
Sbjct: 396 FDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCR 455

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
            G +E  + L   M  +G+  D +TY I+++  C+      A    +EML KGL+P    
Sbjct: 456 EGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLT 515

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           Y   + G    G+   A  L+++M  +G   +++TYNVL+ G C+ G LE+AN LL +M+
Sbjct: 516 YNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEML 575

Query: 551 GDGFIPDHITYTSIIHASLEMGDL 574
             G IP+  TY  I    +E G L
Sbjct: 576 EKGLIPNRTTYEIIKEEMMEKGFL 599



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 149/473 (31%), Positives = 247/473 (52%), Gaps = 9/473 (1%)

Query: 248 TMLDSFCKEGEMQEALELLWE----MQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           ++LDSF K GE   ++ L++       G+ C+ N +  ++L+  +  N +        + 
Sbjct: 128 SILDSFVK-GETNCSISLIFHSLSVCSGQFCA-NSIIADMLVLAYVENSKTVLGLEAFKR 185

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
                 K+S  S NP++    ++        + +EM+ R ++P L T+N +I GLCK G+
Sbjct: 186 AGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGK 245

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF---LLFDELRSRNLVPTVVT 420
           ++ A     +M      P++++YNTL+ GYC+ G +G+ +    +  E+    + P  VT
Sbjct: 246 LNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVT 305

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           +N LIDG C+  +L  A ++ E M +QG+ P V+TY  +VNG C  G L+ A+   +EML
Sbjct: 306 FNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEML 365

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
              L+P+   Y   I G  K     EA  L + +  +G  P++IT+N L+HG CK G +E
Sbjct: 366 SSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKME 425

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA  L + M+  GF+P+  TY  +I      G +   ++L N M  +G+    VTY +LI
Sbjct: 426 EAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILI 485

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
            A   +   + A     EM  KG++P+ +TYN L+NG C    +  A  L   ME+EG  
Sbjct: 486 SAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRW 545

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDY 713
            N  TY +LI   C  G  ++A  L  EML++ + P+  T+  +  + ++K +
Sbjct: 546 ANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGF 598



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/367 (32%), Positives = 192/367 (52%), Gaps = 22/367 (5%)

Query: 203 GLLPDVKNCNRIIK---VLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEM 259
           G  P+V   N +I     +   G   KA  + + M E  + P+ VT+N ++D FCK+  +
Sbjct: 260 GFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENL 319

Query: 260 QEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI 319
             AL++  EMQ +G  P  VTYN L+ G    G+L +A+ L+ +ML   LK +  +YN +
Sbjct: 320 SAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNAL 379

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           I GY +K LL EA  L + +  +G+ P + T+N L++G CK+G++ +A      ML K  
Sbjct: 380 INGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGF 439

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
           +P+  +YN L+ G+CR G + E   L +E++ R +    VTYN LI   C   + + A +
Sbjct: 440 LPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAAR 499

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           L + M+++G+ P  +TY I++NG C  GNL  A     +M ++G   +   Y   I G  
Sbjct: 500 LIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYC 559

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD-- 557
           + G   +A  L  EML KG  P+  TY ++                  +M+  GF+PD  
Sbjct: 560 RKGKLEDANGLLNEMLEKGLIPNRTTYEIIKE----------------EMMEKGFLPDIE 603

Query: 558 -HITYTS 563
            H+ + S
Sbjct: 604 GHLYHAS 610



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 112/330 (33%), Positives = 181/330 (54%), Gaps = 18/330 (5%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIK-VLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
           +  +M+ N + P+    N +I    +D   S  A +V+  M   G+KP++VTYN++++  
Sbjct: 290 ILKEMVENKVSPNSVTFNVLIDGFCKDENLSA-ALKVFEEMQSQGLKPTVVTYNSLVNGL 348

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           C EG++ EA  LL EM      PN +TYN LI G+ +   LE+AR L  ++ K GL  + 
Sbjct: 349 CNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNV 408

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
            ++N ++ GY + G + EA  L++ M+ +G  P  +TYN LI G C+ G++ + ++   E
Sbjct: 409 ITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNE 468

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M  + V  D ++YN L+  +C      +A  L DE+  + L P+ +TYN L++G C  G+
Sbjct: 469 MQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGN 528

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           L  A  L++ M  +G   +V+TY +++ G C+ G L  A    NEML KGL P+R  Y  
Sbjct: 529 LRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEI 588

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
                           ++EEM+ KGF PD+
Sbjct: 589 ----------------IKEEMMEKGFLPDI 602



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 163/311 (52%), Gaps = 3/311 (0%)

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
           +V++ N L+  L +  +    + + + MI + I P++IT+  ++NG CK+G L+ A +  
Sbjct: 194 SVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVV 253

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR---LQEEMLAKGFPPDLITYNVLVHGL 533
           ++M   G  P+   Y T I G  K+G   + Y+   + +EM+     P+ +T+NVL+ G 
Sbjct: 254 DDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGF 313

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
           CK  +L  A ++  +M   G  P  +TY S+++     G L   + L + ML   L P +
Sbjct: 314 CKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNV 373

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
           +TY  LI+ +  +  LE A   F  +  +G+ PNVIT+N L++G C+  ++++A+ L   
Sbjct: 374 ITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKV 433

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDY 713
           M E+G LPN  TY  LI   C  G  +E   L  EM  R ++ D  T++ L+    +K  
Sbjct: 434 MLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKE 493

Query: 714 KVHAVEYLESL 724
              A   ++ +
Sbjct: 494 PKKAARLIDEM 504



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 102/211 (48%), Gaps = 22/211 (10%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
            + LL  Y K   +E+  L+   ML  G LP+    N +I      G   K  EV  ++ 
Sbjct: 411 FNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREG---KMEEVKNLLN 467

Query: 236 EF---GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
           E    G+K   VTYN ++ ++C++ E ++A  L+ EM  +G  P+ +TYN+L+ G+   G
Sbjct: 468 EMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEG 527

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
            L  A  L + M K G   +  +YN +I GY  KG L +A  L  EM+ +G+ P   TY 
Sbjct: 528 NLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYE 587

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
           I+                  EM+ K  +PDI
Sbjct: 588 IIKE----------------EMMEKGFLPDI 602



 Score = 47.0 bits (110), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 60/123 (48%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           ++L+  + +K   ++   + ++ML  GL P     N ++      G    A  + + M +
Sbjct: 482 NILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEK 541

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G   ++VTYN ++  +C++G++++A  LL EM  +G  PN  TY ++       G L  
Sbjct: 542 EGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPD 601

Query: 297 ARG 299
             G
Sbjct: 602 IEG 604


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 150/486 (30%), Positives = 250/486 (51%), Gaps = 2/486 (0%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF--SRNGELEQAR 298
           P +V +N +L S  K+      + L  +M      PN  T  +LI     S    +  A 
Sbjct: 67  PPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAF 126

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
             +  M KLGL+ +  ++  ++ G   K  +++A+ L +E+   G AP+L TY  +I GL
Sbjct: 127 SALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGL 186

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           CK G  ++A     +M  K   PD+++YNT++   C+     EA   F E+  + + P V
Sbjct: 187 CKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNV 246

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           VTY++++ G C  G L  A  L + MI + ++P+ +T+TI+V+G CK G +  AR  F  
Sbjct: 247 VTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEM 306

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M   G++PD + Y+  + G        EA +L + M+ KGF P +  YN+L++G CK   
Sbjct: 307 MTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRR 366

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           L EA  LL +M      PD +TY++++    + G  +  + LF  M   GL P  +TY++
Sbjct: 367 LNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSI 426

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           L+      G L+ AF     MQ   I P++  YN LI G+C   +++ A  LF ++  +G
Sbjct: 427 LLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKG 486

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAV 718
           I P+  TYT++I+     G   EA  ++++M+     P+ CT++  +   L      +AV
Sbjct: 487 IQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAV 546

Query: 719 EYLESL 724
             +E +
Sbjct: 547 RLIEEM 552



 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 160/525 (30%), Positives = 261/525 (49%), Gaps = 2/525 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y     V   +  FN++L    LP V   N+++  L           + + M    I+P+
Sbjct: 44  YNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPN 103

Query: 243 IVTYNTMLDSFCKEG--EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           + T   +++  C      +  A   L +M   G  P  VT+  L+ G     ++  A  L
Sbjct: 104 VYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKL 163

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
             ++ K+G   S  +Y  II G  + G    AL L ++M  +G  P +  YN +I  LCK
Sbjct: 164 FDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCK 223

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
             R ++A + F EM+ + + P++++Y+++L+G+C  G + EA  LF ++  RN++P  VT
Sbjct: 224 DRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVT 283

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           +  L+DGLC+ G +  A+++ E M   G+ PD  TY+ +++G C    +  A++ F+ M+
Sbjct: 284 FTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMV 343

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            KG  P    Y   I G  K    +EA  L  EM  +   PD +TY+ L+ G C+ G  +
Sbjct: 344 GKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQ 403

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
            A +L ++M   G +PD ITY+ ++    + G L     L   M    + P +  Y +LI
Sbjct: 404 VAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILI 463

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                 G+LE A   FS + VKGI+P+V+TY  +I+GL +    ++A  +F  M   G L
Sbjct: 464 QGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCL 523

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           PN  TY + I      G+   A+RL +EM+ R    D  T   LL
Sbjct: 524 PNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLL 568



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 161/533 (30%), Positives = 268/533 (50%), Gaps = 16/533 (3%)

Query: 154 NMHGILDVLIGG----GLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVK 209
           N+H + D +       G+     + + + LL    KK      + +  +M  + + P+V 
Sbjct: 46  NLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVY 105

Query: 210 NCNRIIKVL----RDN---GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
               +I  L    RD+    FS   +     M + G++P+ VT+ T+L+  C + ++ +A
Sbjct: 106 TLTILINCLCHSNRDHVHFAFSALGK-----MFKLGLQPTHVTFGTLLNGLCSKAKIIDA 160

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
           ++L  E+   G +P+ +TY  +I G  + G    A  L++ M + G K    +YN +I  
Sbjct: 161 VKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDS 220

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
             +     EA+    EMV +G+ P + TY+ +++G C  G++++A   F +M+ +NV+P+
Sbjct: 221 LCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPN 280

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
            +++  L+ G C+ G I EA  +F+ +    + P   TY+ L+DG C    ++ AQ+L +
Sbjct: 281 TVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFD 340

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            M+ +G  P V  Y I++NG CK   L+ A+   +EM  + L PD   Y+T + G  + G
Sbjct: 341 IMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAG 400

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
               A +L +EM + G  PD ITY++L+ GLCK G L+EA  LL+ M      P    Y 
Sbjct: 401 RPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYN 460

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
            +I      G L   R+LF+N+  KG+ P++VTYTV+I      G    A   F +M V 
Sbjct: 461 ILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVN 520

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
           G  PN  TYN  I G  R      A  L  +M   G   +  T+ +L++   N
Sbjct: 521 GCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLDLESN 573



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 165/365 (45%), Gaps = 37/365 (10%)

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
           N+ P  I+       Y    ++ +A   F++L     +P VV +N L+  L +       
Sbjct: 29  NISPSSITNGGFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTV 88

Query: 438 QQLKENMINQGILPDVITYTIMV------------------------------------- 460
             L + M    I P+V T TI++                                     
Sbjct: 89  ISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLL 148

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
           NG C    +  A + F+E+ + G  P    YTT I G  K+G T+ A +L ++M  KG  
Sbjct: 149 NGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCK 208

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           PD++ YN ++  LCK     EA     +MV  G  P+ +TY+SI+H    +G L     L
Sbjct: 209 PDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSL 268

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
           F  M+ + + P  VT+T+L+      G +  A   F  M   G+ P+  TY+AL++G C 
Sbjct: 269 FKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCL 328

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
             ++D+A  LF  M  +G  P+   Y ILIN +C +    EA  L  EM DR++ PD  T
Sbjct: 329 QSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVT 388

Query: 701 HSALL 705
           +S L+
Sbjct: 389 YSTLM 393


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 200/754 (26%), Positives = 336/754 (44%), Gaps = 79/754 (10%)

Query: 31  CFSVHTYPSISESNNKDSVLNPESESYYKELIISTVEEKPWAFCNNRWVS---------D 81
           CFS     S+SE   K +VL   S    K  I ++VE      C  + VS          
Sbjct: 20  CFS-----SLSEIPGK-TVLQSSSSEDIKHNIDASVETSSKVACQTKLVSLESTNGKCDT 73

Query: 82  HFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLR 141
              + +++  ++  +LNR +  P  AL++F  ++ +    +     C +L IL  S    
Sbjct: 74  SLNSALTESHVINTLLNR-KSDPTSALKYFERIKKKIEFAKCTDAVCILLLILTNSAETH 132

Query: 142 SAYWVVET----------------VVCVNMHGI-LDVLIGGGLSSC------------VS 172
            A ++ +                 V C  ++   LD+  G  L +             + 
Sbjct: 133 RAQYLFDQFASGKSVRFSCLMDRLVECTKLYNFPLDIQEGNILEAEQHFLQAKARGVELD 192

Query: 173 IKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR 232
            +   + + +   K      L +  +M   G +P       +I      G   +A  +  
Sbjct: 193 QEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKD 252

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
            M   G   ++    +++  +C +G ++ AL L+ E+   G  PN VTY+VLI G  +NG
Sbjct: 253 DMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNG 312

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGY----------------------------- 323
            +E+A     +M   G++ S +S N I+ GY                             
Sbjct: 313 NIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNT 372

Query: 324 -----SEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
                 ++G + EA NL +E++ +G++P + +YN +I G C+   ++ A   + EML   
Sbjct: 373 LLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNG 432

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
             P+ +++  L+ GY + G+I  AF +F  ++  N++PT  T   +I GLC+ G     +
Sbjct: 433 FTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGR 492

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
            L    ++QG +P  + Y  +++G  K GN+++A   + EM   G+ P    YT+ I G 
Sbjct: 493 DLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGF 552

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
            K  +   A +L  +M  KG   D+  Y  L+ G CK   ++ A+ELL ++ G G  P+ 
Sbjct: 553 CKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNR 612

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
             Y S+I     M ++    DL+  M+ +G+   L TYT LI      GRL  A    +E
Sbjct: 613 FIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTE 672

Query: 619 MQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGN 678
           M  KGI P+   +  LINGLC   + + A  +  DM  + ++P+   Y  LI  +   GN
Sbjct: 673 MLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGN 732

Query: 679 WQEALRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
            QEA RL+ EMLDR + PD  T+  L+  +   D
Sbjct: 733 LQEAFRLHDEMLDRGLVPDNITYDILVNGKFKGD 766



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 144/476 (30%), Positives = 238/476 (50%), Gaps = 21/476 (4%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           A  F+  ++T+ G++   +   +ILE     G L+   W        N   + +  +  G
Sbjct: 317 AFEFYSEMKTK-GIRSSVYSLNSILE-----GYLKCQSWQ-------NAFTMFNDALESG 363

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRII--KVLRDNGFS 224
           L++  +   L  L  +  +  M E C L +++++  G+ P+V + N II     +DN  +
Sbjct: 364 LANVFTFNTL--LSWLCKEGKMNEACNL-WDEVIAKGISPNVVSYNNIILGHCRKDNINA 420

Query: 225 VKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVL 284
             A +VY+ M + G  P+ VT+  ++D + K+G+++ A  +   M+     P   T  ++
Sbjct: 421 --ACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGII 478

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           I G  + G   + R L    +  G   +   YN II G+ ++G +  A N+  EM   G+
Sbjct: 479 IKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGI 538

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
            P+  TY  LI G CK   +  A     +M RK +  DI +Y TL+ G+C+  ++  A  
Sbjct: 539 TPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHE 598

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
           L +ELR   L P    YN++I G     ++E A  L + M+N+GI  D+ TYT +++G  
Sbjct: 599 LLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLL 658

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
           K G L  A +   EML KG+ PD  A+T  I G    G    A ++ E+M  K   P ++
Sbjct: 659 KSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVL 718

Query: 525 TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
            YN L+ G  K G+L+EA  L  +M+  G +PD+ITY  +++   + GD    RDL
Sbjct: 719 IYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFK-GDGNFSRDL 773


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 163/531 (30%), Positives = 276/531 (51%), Gaps = 3/531 (0%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMGE 236
           +L+   T+    E  L  F ++LR GL  D    + ++K   +   + +A ++      E
Sbjct: 118 ILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPE 177

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQ--GRGCSPNGVTYNVLITGFSRNGEL 294
            G  P + +YN +L S C +G+  +A +LL  M   G  CSP+ V YN +I GF + G++
Sbjct: 178 LGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDV 237

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
            +A  L ++M++ G+     +Y+ ++    +   + +A     +MV +GV P   TYN L
Sbjct: 238 NKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNL 297

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           IYG    G+  +A   F EM R++++PD+++ NTL+   C+ G I EA  +FD +  +  
Sbjct: 298 IYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQ 357

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P V +Y  +++G    G L     L + M+  GI P + T+ +++      G L  A  
Sbjct: 358 NPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMI 417

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
            FNEM   G++P    Y T IA   ++G   +A     +M+ +G  PD   Y+ L+ G C
Sbjct: 418 IFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFC 477

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
             GSL +A EL+ +++ +G   D + + SII+   ++G +   +++F+  +  GL P  V
Sbjct: 478 THGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAV 537

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
            Y +L+  +   G++E A   F  M   GI PNV+ Y  L+NG C++ RID+   LF +M
Sbjct: 538 VYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREM 597

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            ++GI P+   Y I+I+    AG    A   + EM +  I  + CT+S +L
Sbjct: 598 LQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVL 648



 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 150/542 (27%), Positives = 273/542 (50%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K+  V +   +F +M++ G+ PD+   + ++  L       KA    R M   G+ P 
Sbjct: 231 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPD 290

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             TYN ++  +   G+ +EA+ +  EM+ +   P+ V  N L+    + G++++AR +  
Sbjct: 291 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFD 350

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M   G      SY  ++ GY+ KG LV+  +L + M+  G+AP + T+N+LI      G
Sbjct: 351 TMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCG 410

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            +  A   F EM    V P +++Y T++   CR G + +A   F+++  + +VP    Y+
Sbjct: 411 MLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYH 470

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            LI G C +G L  A++L   ++N G+  D++ +  ++N  CK+G +  A+  F+  +  
Sbjct: 471 CLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNV 530

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           GL PD   Y   + G   +G   +A R+ + M++ G  P+++ Y  LV+G CK+G ++E 
Sbjct: 531 GLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEG 590

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             L R+M+  G  P  I Y  II    E G     +  F+ M   G++    TY++++  
Sbjct: 591 LSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRG 650

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
                  + A   F E++   ++ ++IT N +I G+ + RR+++A  LF  +   G++P 
Sbjct: 651 LFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPC 710

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLE 722
             TY+I+I      G  +EA  ++  M +   EPD    + ++ + L K+  V A  YL 
Sbjct: 711 AVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLS 770

Query: 723 SL 724
            +
Sbjct: 771 KI 772



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 143/503 (28%), Positives = 244/503 (48%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y+     ++ + VF +M R  +LPDV   N ++  L   G   +AR+V+  M   G  P 
Sbjct: 301 YSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPD 360

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           + +Y  ML+ +  +G + +  +L   M G G +P   T+NVLI  ++  G L++A  +  
Sbjct: 361 VFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFN 420

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M   G+K    +Y  +I      G + +A+    +M+ +GV P    Y+ LI G C  G
Sbjct: 421 EMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHG 480

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            +  A+    E++   +  DI+ + +++   C+ G + +A  +FD   +  L P  V YN
Sbjct: 481 SLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYN 540

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            L+DG C  G +E A ++ + M++ GI P+V+ Y  +VNG CK+G +      F EML+K
Sbjct: 541 MLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQK 600

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G++P    Y   I G  + G T  A     EM   G   +  TY++++ GL K    +EA
Sbjct: 601 GIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEA 660

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             L +++       D IT  ++I    +   +   +DLF ++ R GL P  VTY+++I  
Sbjct: 661 IFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITN 720

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
               G +E A   FS MQ  G  P+    N ++  L +   I +A      ++E      
Sbjct: 721 LIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLE 780

Query: 663 KYTYTILINENCNAGNWQEALRL 685
             T  +L++   + G  +E +R 
Sbjct: 781 HLTAMLLVDLFSSKGTCREQIRF 803



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 134/475 (28%), Positives = 223/475 (46%), Gaps = 39/475 (8%)

Query: 270 QG-RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
           QG R  SP   TY +L+   +R    E A      +L+ GL+V A   + ++ G+ E   
Sbjct: 104 QGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKR 163

Query: 329 LVEALN-LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI--PDIIS 385
             EAL+ L       G  P + +YNIL+  LC  G+   A      M     +  PD+++
Sbjct: 164 TDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVA 223

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           YNT++ G+ + G++ +A  LF E+  R + P +VTY++++  LC+   ++ A+     M+
Sbjct: 224 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMV 283

Query: 446 NQGILPDVITYTIMVNGS-----------------------------------CKMGNLS 470
           N+G+LPD  TY  ++ G                                    CK G + 
Sbjct: 284 NKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIK 343

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            AR+ F+ M  KG  PD F+YT  + G    G   +   L + ML  G  P + T+NVL+
Sbjct: 344 EARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLI 403

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
                 G L++A  +  +M   G  P  +TY ++I A   +G +    + FN M+ +G+ 
Sbjct: 404 KAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVV 463

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           P    Y  LI      G L  A    SE+   G+R +++ + ++IN LC+L R+  A  +
Sbjct: 464 PDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNI 523

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           F      G+ P+   Y +L++  C  G  ++ALR++  M+   IEP+   +  L+
Sbjct: 524 FDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLV 578



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 118/416 (28%), Positives = 210/416 (50%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
           L+ L+    K   +++   VF+ M   G  PDV +   ++      G  V   +++ +M 
Sbjct: 329 LNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLML 388

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
             GI P I T+N ++ ++   G + +A+ +  EM+  G  P+ VTY  +I    R G+++
Sbjct: 389 GDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMD 448

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
            A      M+  G+    ++Y+ +I G+   G L++A  L  E++  G+   +  +  +I
Sbjct: 449 DAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSII 508

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
             LCK GRV DA++ F   +   + PD + YN L+ GYC  G + +A  +FD + S  + 
Sbjct: 509 NNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIE 568

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P VV Y TL++G C+ G ++    L   M+ +GI P  I Y I+++G  + G    A+  
Sbjct: 569 PNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVK 628

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
           F+EM   G+  ++  Y+  + G  K     EA  L +E+ A     D+IT N ++ G+ +
Sbjct: 629 FHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQ 688

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
              +EEA +L   +   G +P  +TY+ +I   ++ G +    D+F++M   G  P
Sbjct: 689 TRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEP 744



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 139/322 (43%), Gaps = 29/322 (9%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G++ D   F +I+  L + G +  A  + +  V V +H                  + ++
Sbjct: 496 GMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHP--------------DAVVYNM 541

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKN----CNRIIKVLR-DNGFSVKAREVYRM 233
           L+  Y     +E+ L VF+ M+  G+ P+V       N   K+ R D G S+     +R 
Sbjct: 542 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSL-----FRE 596

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M + GIKPS + YN ++D   + G    A     EM   G + N  TY++++ G  +N  
Sbjct: 597 MLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRC 656

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
            ++A  L +++  + +K+   + N +I G  +   + EA +L   +   G+ P   TY+I
Sbjct: 657 FDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSI 716

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           +I  L K G V +A   F  M      PD    N ++    +   I  A     ++  RN
Sbjct: 717 MITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERN 776

Query: 414 LVPTVVTYNTLID-----GLCR 430
                +T   L+D     G CR
Sbjct: 777 FSLEHLTAMLLVDLFSSKGTCR 798


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 147/415 (35%), Positives = 237/415 (57%)

Query: 186 KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVT 245
           +S V + +++  +M+ NG  P+V   N I+  +  +G +  A ++ R M E  +K  + T
Sbjct: 148 ESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFT 207

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           Y+T++DS C++G +  A+ L  EM+ +G   + VTYN L+ G  + G+      L++DM 
Sbjct: 208 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMT 267

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
              +  +  ++N +I  + ++G L EA  L +EM+T+G++P   TYN L+ G C   R+S
Sbjct: 268 SRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLS 327

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
           +A +    M+R N  PDI+++ +L+ GYC+   + E   LF ++  R LV   VTY+ L+
Sbjct: 328 EANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILV 387

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
            G C+ G LE+A++L + M++ G+LPDV+TY I+++G C  G L  A E F ++ +  + 
Sbjct: 388 QGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMN 447

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
            D   YT  I G  K G   +A+ L   +  KG  P+++TY V++ GLCK GSL EAN L
Sbjct: 448 LDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL 507

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           LRKM  DG  P+  TY ++I A L  GDL     L   M   G S    +  ++I
Sbjct: 508 LRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 562



 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 151/495 (30%), Positives = 263/495 (53%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F +M+R+  LP + + +R    +          +  + M   GI  +I T N M++ FC
Sbjct: 52  LFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMINCFC 111

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           +  +   A  +L ++   G  P+  T+N LI G     ++ +A  L+  M++ G + +  
Sbjct: 112 RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVV 171

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +YN I+ G  + G    AL+L  +M  R V   + TY+ +I  LC+ G +  A   F EM
Sbjct: 172 TYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 231

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
             K +   +++YN+L+ G C++G   +   L  ++ SR ++P V+T+N LID   + G L
Sbjct: 232 ETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKL 291

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A +L + MI +GI P+ ITY  +++G C    LS A    + M+R    PD   +T+ 
Sbjct: 292 QEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSL 351

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I G  K+    E  +L  ++  +G   + +TY++LV G C+ G LE A EL ++MV  G 
Sbjct: 352 IKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGV 411

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
           +PD +TY  ++    + G L +  ++F ++ +  ++  +V YT++I      G++E A+ 
Sbjct: 412 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWN 471

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F  +  KG++PNV+TY  +I+GLC+   + +A  L   MEE+G  PN  TY  LI  + 
Sbjct: 472 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHL 531

Query: 675 NAGNWQEALRLYKEM 689
             G+   + +L +EM
Sbjct: 532 RDGDLTASAKLIEEM 546



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 144/492 (29%), Positives = 261/492 (53%), Gaps = 3/492 (0%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PS+V ++          +    L+   +M+  G + N  T N++I  F R  +   A  +
Sbjct: 63  PSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 122

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  ++KLG +    ++N +I G   +  + EA+ L   MV  G  P + TYN ++ G+CK
Sbjct: 123 LGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICK 182

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G  S A     +M  +NV  D+ +Y+T++   CR G I  A  LF E+ ++ +  ++VT
Sbjct: 183 SGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVT 242

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YN+L+ GLC+ G      QL ++M ++ I+P+VIT+ ++++   K G L  A E + EM+
Sbjct: 243 YNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMI 302

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            KG+ P+   Y + + G       SEA  + + M+     PD++T+  L+ G CK+  ++
Sbjct: 303 TKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVD 362

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           E  +L RK+   G + + +TY+ ++    + G L    +LF  M+  G+ P ++TY +L+
Sbjct: 363 EGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILL 422

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                 G+LE A   F ++Q   +  +++ Y  +I G+C+  +++ A+ LF  +  +G+ 
Sbjct: 423 DGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVK 482

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQL-DKDYKVHA-- 717
           PN  TYT++I+  C  G+  EA  L ++M +   EP+ CT++ L+   L D D    A  
Sbjct: 483 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKL 542

Query: 718 VEYLESLTLGAE 729
           +E ++S    A+
Sbjct: 543 IEEMKSCGFSAD 554



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 143/482 (29%), Positives = 251/482 (52%)

Query: 198 KMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG 257
           KM  NG+  ++   N +I        +  A  V   + + G +P   T+NT+++  C E 
Sbjct: 90  KMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLES 149

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
           ++ EA+ L+  M   GC PN VTYN ++ G  ++G+   A  L+R M +  +K    +Y+
Sbjct: 150 KVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYS 209

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            II      G +  A++L +EM T+G+  +L TYN L+ GLCK G+ +D      +M  +
Sbjct: 210 TIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSR 269

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
            +IP++I++N L+  + + G + EA  L+ E+ ++ + P  +TYN+L+DG C    L  A
Sbjct: 270 KIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEA 329

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
             + + M+     PD++T+T ++ G CK+  +    + F ++ ++GL  +   Y+  + G
Sbjct: 330 NNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQG 389

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
             + G    A  L +EM++ G  PD++TY +L+ GLC  G LE+A E+   +       D
Sbjct: 390 FCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLD 449

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
            + YT II    + G +    +LF ++  KG+ P ++TYTV+I     +G L  A +   
Sbjct: 450 IVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 509

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
           +M+  G  PN  TYN LI    R   +  +  L  +M+  G   +  +  ++I+   +A 
Sbjct: 510 KMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLSSAV 569

Query: 678 NW 679
            W
Sbjct: 570 WW 571



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 98/192 (51%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K   V++ + +F K+ + GL+ +    + +++    +G    A E+++ M   G+ P 
Sbjct: 355 YCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPD 414

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           ++TY  +LD  C  G++++ALE+  ++Q    + + V Y ++I G  + G++E A  L  
Sbjct: 415 VMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFC 474

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            +   G+K +  +Y  +I G  +KG L EA  L  +M   G  P   TYN LI    + G
Sbjct: 475 SLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDG 534

Query: 363 RVSDARHRFFEM 374
            ++ +     EM
Sbjct: 535 DLTASAKLIEEM 546



 Score = 40.8 bits (94), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 40/171 (23%), Positives = 78/171 (45%), Gaps = 14/171 (8%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           GV  D   +  +L+ L ++G L  A  + E +    M+  LD+++              +
Sbjct: 410 GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMN--LDIVM------------YTI 455

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           ++    K   VE    +F  +   G+ P+V     +I  L   G   +A  + R M E G
Sbjct: 456 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 515

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
            +P+  TYNT++ +  ++G++  + +L+ EM+  G S +  +  ++I   S
Sbjct: 516 NEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLS 566


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 159/487 (32%), Positives = 258/487 (52%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P +   N+I+  L      + A  + + M   GI+ + VT N +++ FC  G+M  +  +
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           L ++   G  P+ +T N L+ G    GE++++      ++  G ++   SY  ++ G  +
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
            G    A+ L   +  R   P +  YN +I GLCK   V++A   + EM  + + PD I+
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           Y TL+YG+C  G +  AF L DE+  +N+ P V  YN LI+ LC+ G+++ A+ L   M 
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMT 247

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
            +GI P V+TY+ +++G C +G +  A++ F+ M++ G+ P+ ++Y   I G  K     
Sbjct: 248 KEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVD 307

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           EA  L  EML K   PD +TYN L+ GLCK G +  A  L+ +M   G   D +TYTS++
Sbjct: 308 EAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLL 367

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
            A  +  +L +   LF  M  +G+ PT+ TYT LI      GRL+ A   F  + VKG  
Sbjct: 368 DALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCC 427

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
            +V TY  +I+GLC+    D+A  +   ME+ G +PN  T+ I+I          +A +L
Sbjct: 428 IDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKL 487

Query: 686 YKEMLDR 692
             EM+ +
Sbjct: 488 LHEMIAK 494



 Score =  265 bits (677), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 150/484 (30%), Positives = 257/484 (53%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P I+ +N +L S  K  +   A+ L  +M+ +G   N VT N+LI  F   G++  +  +
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  +LKLG +    + N ++ G   KG + ++L+  +++V +G      +Y  L+ GLCK
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G    A      +  ++  P+++ YNT++ G C+   + EA+ L+ E+ +R + P  +T
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y TLI G C  G L  A  L + MI + I P V  Y I++N  CK GN+  A+     M 
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMT 247

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           ++G++P    Y+T + G   +G+   A ++   M+  G  P++ +YN++++GLCK   ++
Sbjct: 248 KEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVD 307

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA  LLR+M+    +PD +TY S+I    + G +    +L N M  +G    +VTYT L+
Sbjct: 308 EAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLL 367

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
            A      L+ A   F +M+ +GI+P + TY ALI+GLC+  R+  A  LF  +  +G  
Sbjct: 368 DALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCC 427

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
            + +TYT++I+  C  G + EAL +  +M D    P+  T   ++    +KD    A + 
Sbjct: 428 IDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKL 487

Query: 721 LESL 724
           L  +
Sbjct: 488 LHEM 491



 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 150/457 (32%), Positives = 235/457 (51%), Gaps = 4/457 (0%)

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
           + G +P  +T NT++   C +GE++++L    ++  +G   + V+Y  L+ G  + GE  
Sbjct: 73  KLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETR 132

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
            A  L+R +     + +   YN II G  +  L+ EA +L  EM  RG+ P   TY  LI
Sbjct: 133 CAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLI 192

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
           YG C  G++  A     EM+ KN+ P +  YN L+   C+ GN+ EA  L   +    + 
Sbjct: 193 YGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIK 252

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P VVTY+TL+DG C  G+++ A+Q+   M+  G+ P+V +Y IM+NG CK   +  A   
Sbjct: 253 PGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNL 312

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
             EML K + PD   Y + I G  K G  + A  L  EM  +G P D++TY  L+  LCK
Sbjct: 313 LREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCK 372

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
             +L++A  L  KM   G  P   TYT++I    + G L+  ++LF ++L KG    + T
Sbjct: 373 NQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWT 432

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           YTV+I      G  + A    S+M+  G  PN +T+  +I  L      D+A  L  +M 
Sbjct: 433 YTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMI 492

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
            +G+L   +    +  +N N     +A +L  EM+ +
Sbjct: 493 AKGLLVLDFKVADVFVQNEN----DKAEKLLHEMIAK 525



 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 139/404 (34%), Positives = 218/404 (53%)

Query: 186 KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVT 245
           K  V++ L   +K++  G   D  +   ++  L   G +  A ++ RM+ +   +P++V 
Sbjct: 93  KGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVM 152

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           YNT++D  CK+  + EA +L  EM  RG  P+ +TY  LI GF   G+L  A  L+ +M+
Sbjct: 153 YNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMI 212

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
              +    + YN +I    ++G + EA NL   M   G+ P + TY+ L+ G C  G V 
Sbjct: 213 LKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQ 272

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
           +A+  F  M++  V P++ SYN ++ G C+   + EA  L  E+  +N+VP  VTYN+LI
Sbjct: 273 NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLI 332

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           DGLC+ G +  A  L   M ++G   DV+TYT +++  CK  NL  A   F +M  +G+Q
Sbjct: 333 DGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQ 392

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           P  + YT  I G  K G    A  L + +L KG   D+ TY V++ GLCK G  +EA  +
Sbjct: 393 PTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAI 452

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
             KM  +G IP+ +T+  II +  E  +  +   L + M+ KGL
Sbjct: 453 KSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 496



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 123/350 (35%), Positives = 193/350 (55%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P+V   N II  L  +    +A ++Y  M   GI P  +TY T++  FC  G++  A  L
Sbjct: 148 PNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSL 207

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           L EM  +  +P    YN+LI    + G +++A+ L+  M K G+K    +Y+ ++ GY  
Sbjct: 208 LDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCL 267

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
            G +  A  +   MV  GV P + +YNI+I GLCK  RV +A +   EML KN++PD ++
Sbjct: 268 VGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVT 327

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           YN+L+ G C+SG I  A  L +E+  R     VVTY +L+D LC+  +L+ A  L   M 
Sbjct: 328 YNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMK 387

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
            +GI P + TYT +++G CK G L  A+E F  +L KG   D + YT  I+G  K G   
Sbjct: 388 ERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFD 447

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
           EA  ++ +M   G  P+ +T+ +++  L +    ++A +LL +M+  G +
Sbjct: 448 EALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 497



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 92/192 (47%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V++ + +  +ML   ++PD    N +I  L  +G    A  +   M   G    +VTY +
Sbjct: 306 VDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTS 365

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +LD+ CK   + +A  L  +M+ RG  P   TY  LI G  + G L+ A+ L + +L  G
Sbjct: 366 LLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKG 425

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
             +   +Y  +I G  ++G+  EAL ++ +M   G  P   T+ I+I  L +      A 
Sbjct: 426 CCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAE 485

Query: 369 HRFFEMLRKNVI 380
               EM+ K ++
Sbjct: 486 KLLHEMIAKGLL 497



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 64/133 (48%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL    K   +++   +F KM   G+ P +     +I  L   G    A+E+++ +   G
Sbjct: 366 LLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKG 425

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
               + TY  M+   CKEG   EAL +  +M+  GC PN VT+ ++I       E ++A 
Sbjct: 426 CCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAE 485

Query: 299 GLIRDMLKLGLKV 311
            L+ +M+  GL V
Sbjct: 486 KLLHEMIAKGLLV 498


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 171/532 (32%), Positives = 263/532 (49%), Gaps = 7/532 (1%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
           F+ M+R+   P + + N ++  L       +   +Y  M   G+     T N +L+  C 
Sbjct: 57  FHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCN 116

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
              ++E       +  RG SPN VTYN LI G      + +A  L   M KLG      +
Sbjct: 117 VNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVT 176

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTR------GVAPTLATYNILIYGLCKWGRVSDARH 369
           Y  +I G    G +  AL L +EM+           P + TYNI++ GLCK GR  +A+ 
Sbjct: 177 YGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQ 236

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
            F EM  + +IP IISYN+L++G+C +G   E+  L DE+  + L P +VT+N LID LC
Sbjct: 237 LFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLC 296

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
           + G +  A++L   MI  GI+PD++TY  ++ G C +G+L+ ARE F  M  KG +PD  
Sbjct: 297 KEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVI 356

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
           +Y   I G  K     EA +L  EML  G  P++ITY+ L+ G+   G +++A +L   M
Sbjct: 357 SYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVM 416

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRL 609
              G   +  TY   +    +   L     LF  +        +     LI      G+L
Sbjct: 417 KAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKL 476

Query: 610 ELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL 669
           E A+  F ++  +G  PNV+TY  +I+G CR  ++D+A  L   ME  G  P+  TY  L
Sbjct: 477 ETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTL 536

Query: 670 INENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYL 721
           +     +   +E ++L   M  +++ PD  T S +++  L KD K     +L
Sbjct: 537 MRGFYESNKLEEVVQLLHRMAQKDVSPDAITCS-IVVDMLSKDEKYQECLHL 587



 Score =  265 bits (676), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 165/526 (31%), Positives = 270/526 (51%), Gaps = 18/526 (3%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPD------VKNCNRIIKVLRDNGFSV 225
           S+   + LL    K     Q   ++N+M  +GL  D      + NC   +  LR+ GF+ 
Sbjct: 68  SLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLRE-GFAA 126

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
            A  + R     G  P+IVTYNT++   C E  + EA  L   MQ  GC+P+ VTY  LI
Sbjct: 127 FAGILRR-----GYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLI 181

Query: 286 TGFSRNGELEQARGLIRDML------KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
            G    G +  A  L ++ML      ++  K +  +YN I+ G  + G   EA  L EEM
Sbjct: 182 KGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEM 241

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
            T+G+ P++ +YN LI+G C  G+  +++    EML + + PD++++N L+   C+ G +
Sbjct: 242 KTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKV 301

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
            EA  L   +    +VP +VTYN+LI+G C  GDL  A++L  +M ++G  PDVI+Y ++
Sbjct: 302 IEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVL 361

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           +NG  K   +  A + +NEML  G +P+   Y + + G    G   +A +L   M A G 
Sbjct: 362 INGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGI 421

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
             +  TY + + GLCK   L EA +L  ++    F  +      +I    + G L    +
Sbjct: 422 AENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWE 481

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
           LF  +  +G  P +VTYT++IH     G+++ A +   +M+  G  P++ITYN L+ G  
Sbjct: 482 LFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFY 541

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
              ++++   L   M ++ + P+  T +I+++       +QE L L
Sbjct: 542 ESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHL 587



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 145/491 (29%), Positives = 248/491 (50%), Gaps = 6/491 (1%)

Query: 221 NGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVT 280
           N  +  A   + +M      PS+ ++N +L    K     +   L  +M+  G S +  T
Sbjct: 47  NVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCT 106

Query: 281 YNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV 340
            N+L+        L +       +L+ G   +  +YN +I G   +  + EA  L   M 
Sbjct: 107 LNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQ 166

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK------NVIPDIISYNTLLYGYC 394
             G  P + TY  LI GLC  G ++ A     EML        N  P++I+YN ++ G C
Sbjct: 167 KLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLC 226

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
           + G   EA  LF+E++++ ++P++++YN+LI G C  G  E +++L + M++QG+ PD++
Sbjct: 227 KVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMV 286

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
           T+ ++++  CK G +  A++    M+  G+ PD   Y + I G   +GD + A  L   M
Sbjct: 287 TFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSM 346

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
            +KG  PD+I+YNVL++G  K   +EEA +L  +M+  G  P+ ITY S++      G +
Sbjct: 347 PSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKV 406

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
              + LF+ M   G++    TY + +        L  A   F+E++    +  +   N L
Sbjct: 407 DDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCL 466

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           I+GLC+  +++ A+ LF  +  EG  PN  TYTI+I+  C  G   +A  L ++M     
Sbjct: 467 IDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGC 526

Query: 695 EPDYCTHSALL 705
            PD  T++ L+
Sbjct: 527 TPDIITYNTLM 537



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 128/373 (34%), Positives = 192/373 (51%), Gaps = 10/373 (2%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR--EVYRMMGEF---GIKPSIVTYNTM 249
           +F +M   G++P + + N +I     +GF    +  E  R++ E    G++P +VT+N +
Sbjct: 237 LFEEMKTQGMIPSIISYNSLI-----HGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVL 291

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           +D+ CKEG++ EA +LL  M   G  P+ VTYN LI GF   G+L  AR L   M   G 
Sbjct: 292 IDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGC 351

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
           +    SYN +I GYS+   + EA+ L  EM+  G  P + TY+ L+ G+   G+V DA+ 
Sbjct: 352 EPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKK 411

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
            F  M    +  +  +Y   L G C++  + EA  LF EL+S N    +   N LIDGLC
Sbjct: 412 LFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLC 471

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
           + G LE A +L E + N+G  P+V+TYTIM++G C+ G +  A     +M   G  PD  
Sbjct: 472 KAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDII 531

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
            Y T + G  +     E  +L   M  K   PD IT +++V  L K    +E   LL + 
Sbjct: 532 TYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRF 591

Query: 550 VGDGFIPDHITYT 562
                +  H+  T
Sbjct: 592 PIQKGVDKHLLMT 604



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 65/131 (49%)

Query: 171 VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV 230
           + I+ L+ L+    K   +E    +F K+   G  P+V     +I      G   KA  +
Sbjct: 458 LEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVL 517

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
            + M   G  P I+TYNT++  F +  +++E ++LL  M  +  SP+ +T ++++   S+
Sbjct: 518 IQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSK 577

Query: 291 NGELEQARGLI 301
           + + ++   L+
Sbjct: 578 DEKYQECLHLL 588


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 166/543 (30%), Positives = 276/543 (50%), Gaps = 8/543 (1%)

Query: 187 SMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEFGIKPSIVT 245
           S   + + +F+  L   LLP    CN ++  L R   + + A  VYR M    + PS  +
Sbjct: 53  SQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGL-AFSVYRRMTHVDVLPSFGS 111

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
            + +++ F    + Q    ++  +  RG + N    N+++ G  RNG + +A GLIR+M 
Sbjct: 112 LSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMG 171

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
           +  +     SYN +I G  +   L EA+ L  EM   G  P   T   L+ GLCK GR+ 
Sbjct: 172 RKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMD 231

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
           +A      M +K    D++ Y TL+ G+C +GN+     LFDE+  + +   VVTY+ L+
Sbjct: 232 EAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLV 291

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
            GLCR G  + A  +   M   GI PDV+TYT +++G CK G  + A +  N M+ KG +
Sbjct: 292 HGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEE 351

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           P    Y   ++G  K G   +A+++   M+ KG   D++TYN L+ GLC  G ++EA +L
Sbjct: 352 PSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKL 411

Query: 546 LRKMVG--DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
              M    +   P+  T+  +I    + G L +   +   M++KG    LVTY +L+   
Sbjct: 412 FNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGC 471

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
              G+++ A   + ++   G  PN  TY+ LI+G C++R ++ A GLF +M   G+ P  
Sbjct: 472 LKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPAL 531

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLES 723
           + Y  L+   C  G+ ++A  L++EM +   EPD  + + +    +D   K    ++++ 
Sbjct: 532 FDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTM----IDGTLKAGDFQFVKE 587

Query: 724 LTL 726
           L +
Sbjct: 588 LQM 590



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 152/470 (32%), Positives = 238/470 (50%), Gaps = 3/470 (0%)

Query: 203 GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           G  P+   C  ++  L  +G   +A E+   M + G    +V Y T++  FC  G +   
Sbjct: 209 GCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRG 268

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
            EL  EM G+G S N VTY+ L+ G  R G+ ++A  ++  M + G+     +Y  +I G
Sbjct: 269 KELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDG 328

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
             + G    A++L   MV +G  P+  TYN+L+ GLCK G V DA      M+ K    D
Sbjct: 329 LCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKAD 388

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDEL--RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           +++YNTL+ G C  G + EA  LF+ +      L P V T+N LI GLC+ G L  A ++
Sbjct: 389 VVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKI 448

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
              M+ +G   +++TY +++ G  K G +  A E + ++L  G  P+ F Y+  I G  K
Sbjct: 449 HRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCK 508

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
           +   + A  L  EM   G  P L  YN L+  LCK GSLE+A  L ++M      PD I+
Sbjct: 509 MRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIIS 568

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           + ++I  +L+ GD +  ++L   M+  GL P  +T++ LI+  +  G L+ A      M 
Sbjct: 569 FNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMV 628

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG-ILPNKYTYTIL 669
             G  P+ + Y++L+ GL       +   L   M  +G +L  K   TIL
Sbjct: 629 ASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTIL 678



 Score =  252 bits (644), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 167/556 (30%), Positives = 281/556 (50%), Gaps = 30/556 (5%)

Query: 157 GILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK 216
           G++ +++  G +  V++ I++++L    +   V + + +  +M R  + PD+ + N +I 
Sbjct: 130 GVVGLVLKRGFT--VNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLI- 186

Query: 217 VLRDNGFSVKAREVYRMMG------EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQ 270
               NG   KA+++   +G        G  P+ VT  T++D  CK+G M EA+ELL  M+
Sbjct: 187 ----NGL-CKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMK 241

Query: 271 GRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLV 330
            +G   + V Y  LI+GF  NG L++ + L  +ML  G+  +  +Y+ ++ G    G   
Sbjct: 242 KKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWK 301

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
           EA  +   M   G+ P + TY  LI GLCK GR + A      M+ K   P  ++YN LL
Sbjct: 302 EANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLL 361

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI-NQGI 449
            G C+ G + +AF +   +  +     VVTYNTL+ GLC  G ++ A +L  +M  N+  
Sbjct: 362 SGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENC 421

Query: 450 L-PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
           L P+V T+ +++ G CK G L+ A +   +M++KG   +   Y   + G LK G   EA 
Sbjct: 422 LEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAM 481

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
            L +++L  GF P+  TY++L+ G CK+  L  A  L  +M   G  P    Y +++ + 
Sbjct: 482 ELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASL 541

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK----GI 624
            + G L + + LF  M      P ++++  +I      G     F +  E+Q+K    G+
Sbjct: 542 CKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGD----FQFVKELQMKMVEMGL 597

Query: 625 RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
           RP+ +T++ LIN L +L  +D+A      M   G  P+   Y  L+    + G+  E + 
Sbjct: 598 RPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIIN 657

Query: 685 LYKEM------LDREI 694
           L  +M      LDR+I
Sbjct: 658 LLHQMAAKGTVLDRKI 673



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 123/373 (32%), Positives = 203/373 (54%), Gaps = 2/373 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V N M  +G+ PDV     +I  L  +G +  A ++  +M E G +PS VTYN +L   C
Sbjct: 306 VLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLC 365

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML--KLGLKVS 312
           KEG + +A ++L  M  +G   + VTYN L+ G    G++++A  L   M   +  L+ +
Sbjct: 366 KEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPN 425

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
             ++N +I G  ++G L +A+ +  +MV +G    L TYN+L+ G  K G++ +A   + 
Sbjct: 426 VFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWK 485

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
           ++L    +P+  +Y+ L+ G+C+   +  A  LF E+R+  L P +  YNTL+  LC+ G
Sbjct: 486 QVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEG 545

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
            LE A+ L + M N    PD+I++  M++G+ K G+    +E   +M+  GL+PD   ++
Sbjct: 546 SLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFS 605

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
           T I    KLG+  EA    E M+A GF PD + Y+ L+ GL   G   E   LL +M   
Sbjct: 606 TLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAK 665

Query: 553 GFIPDHITYTSII 565
           G + D    ++I+
Sbjct: 666 GTVLDRKIVSTIL 678



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/351 (32%), Positives = 187/351 (53%), Gaps = 4/351 (1%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           + N M+  G  P     N ++  L   G  + A ++ RMM E G K  +VTYNT++   C
Sbjct: 341 LLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLC 400

Query: 255 KEGEMQEALELLWEM-QGRGC-SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
            +G++ EAL+L   M     C  PN  T+N+LI G  + G L +A  + R M+K G   +
Sbjct: 401 DKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGN 460

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
             +YN ++ G  + G + EA+ L ++++  G  P   TY+ILI G CK   ++ A+  F 
Sbjct: 461 LVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFC 520

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
           EM    + P +  YNTL+   C+ G++ +A  LF E+ + N  P ++++NT+IDG  + G
Sbjct: 521 EMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAG 580

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
           D +  ++L+  M+  G+ PD +T++ ++N   K+G L  A+     M+  G  PD   Y 
Sbjct: 581 DFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYD 640

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           + + G    GDT+E   L  +M AKG   D    + ++  LC   S++E +
Sbjct: 641 SLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCH--SIQEVD 689


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 150/491 (30%), Positives = 267/491 (54%), Gaps = 15/491 (3%)

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           KA  V++ M +   +P   T+  +L   C+  ++++A +LL  M+  GC P+   YN LI
Sbjct: 25  KASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNALI 84

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
           +G+S+  +  QA   + +M+K     +  +Y  I+ G  +     +A+ L +EM  +G +
Sbjct: 85  SGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCS 144

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P + TYN+++ GLC+  ++ +A+    EM  +   PD+++YN+ + G C+   + EA   
Sbjct: 145 PNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKF 204

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
              +    + P VV+Y T+I+GLC+ GDL+ A ++ ++M N+G  PDV+TY+ +++G CK
Sbjct: 205 LARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCK 261

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
            G +  A    + ML+ G +P+  AY + +    +LG   +A  +  EM  +GF PD+++
Sbjct: 262 GGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVS 321

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII-----HASLEMGDLRRGR-- 578
           YN  + GLCK   +++A  +  +MV  G  P+  +Y+ +I     +  L  G  + GR  
Sbjct: 322 YNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFD 381

Query: 579 ---DLFNNML-RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
               LF+ +L  K   P +  Y V++ +H  R +++ A     +M  K    NV+T+N L
Sbjct: 382 EACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC-CNVVTWNIL 440

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           ++GLC   R+  A  + + M +EG +P+  TY  L++  C  G    AL L++E +    
Sbjct: 441 VHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGC 500

Query: 695 EPDYCTHSALL 705
            PD  T+SAL+
Sbjct: 501 VPDVVTYSALI 511



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 165/554 (29%), Positives = 273/554 (49%), Gaps = 17/554 (3%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LLL  T++   ++   VF +M+     PD      +++ L  +    KAR++   M E G
Sbjct: 13  LLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMG 72

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
             P    YN ++  + K  +  +A + L EM    C P  VTY  ++ G  +      A 
Sbjct: 73  CVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAV 132

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L+ +M   G   + ++YN I+ G  E+  L EA  + EEM  RG  P + TYN  I GL
Sbjct: 133 KLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGL 192

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           CK  RV +AR +F  + R  V PD++SY T++ G C+SG++  A  + D + +R   P V
Sbjct: 193 CKCDRVDEAR-KF--LARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDV 249

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           VTY++LIDG C+ G++E A  L ++M+  G  P+++ Y  ++    ++G++  A +   E
Sbjct: 250 VTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVE 309

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP----------DLITYNV 528
           M R+G  PD  +Y   I G  K     +A  + + M+ +G  P          D++ Y V
Sbjct: 310 MERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTV 369

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFI-PDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
           L+ GLCK G  +EA  L  K++ +    PD   Y  ++ +  +   + +   +   ML K
Sbjct: 370 LLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEK 429

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
                +VT+ +L+H      RL  A      M  +G  P+ +TY  L++ +C+  +   A
Sbjct: 430 NCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAA 488

Query: 648 YGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL--L 705
             LF +  + G +P+  TY+ LI    +    +EA  L+ ++++R   PD  T   L   
Sbjct: 489 LELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLLHRK 548

Query: 706 LKQLDKDYKVHAVE 719
           LK L+K  K   V+
Sbjct: 549 LKLLNKPRKAEVVD 562



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 132/426 (30%), Positives = 223/426 (52%), Gaps = 19/426 (4%)

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
           +G + +  +YN ++   + +    +A  + +EM+ +   P   T+ IL+ GLC+  ++  
Sbjct: 1   MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEK 60

Query: 367 ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
           AR     M     +PD   YN L+ GY ++ + G+AF    E+   + +PTVVTY  ++D
Sbjct: 61  ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120

Query: 427 GLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
           GLC+      A +L + M ++G  P++ TY ++V G C+   L  A++   EM  +G  P
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP 180

Query: 487 DRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
           D   Y + I G  K     EA +    M      PD+++Y  +++GLCK G L+ A+ +L
Sbjct: 181 DVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRML 237

Query: 547 RKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAAR 606
             M   G  PD +TY+S+I    + G++ R   L ++ML+ G  P +V Y  L+ A    
Sbjct: 238 DHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRL 297

Query: 607 GRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT- 665
           G +  A     EM+ +G  P+V++YNA I+GLC+  R+ +A  +F  M E G  PN  + 
Sbjct: 298 GHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSY 357

Query: 666 ---------YTILINENCNAGNWQEALRLYKEMLDREI-EPDYCTHSALL-----LKQLD 710
                    YT+L++  C  G + EA  L+ ++LD +I EPD   ++ +L      +Q+D
Sbjct: 358 SMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQID 417

Query: 711 KDYKVH 716
           K  ++H
Sbjct: 418 KALQIH 423


>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Glycine max]
          Length = 1078

 Score =  275 bits (704), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 181/614 (29%), Positives = 293/614 (47%), Gaps = 22/614 (3%)

Query: 105 RIALRFFRWVETQPGVKRDEF--VFCTILEILIESGLLRSAYWVVETV--VCVNMHGILD 160
           R+AL+F  WV  QP ++ +    + CT   IL+ + +   A   ++ +  + + ++ +  
Sbjct: 33  RLALKFLNWVIKQPNLELNHVTHIICTTTHILVRARMYNFAKTTLKHLLQLPIGLNSVFG 92

Query: 161 VLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRD 220
            L+        +  + DLL+ +  +  MV   +  F  M   GL P V  CN ++     
Sbjct: 93  ALMETYPICNSNPAVFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVL----- 147

Query: 221 NGFSVKAREV------YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGC 274
            G  VK ++V      ++ M   GI P + T+N +L++ C+ G+ + A  LL +M+  G 
Sbjct: 148 -GSLVKEQKVDMFWSFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGV 206

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
            P  VTYN L+  + + G  + A  LI  M   G+ V   +YN  I          +   
Sbjct: 207 YPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYL 266

Query: 335 LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
           L + M    V P   TYN LI G  + G++  A   F EM   N++P+ I+YNTL+ G+C
Sbjct: 267 LLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHC 326

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
            +GNIGEA  L D + S  L P  VTY  L++GL +  +  +   + E M   G+    I
Sbjct: 327 TTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHI 386

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
           +YT M++G CK G L  A +  ++ML+  + PD   ++  I G  ++G  + A  +  +M
Sbjct: 387 SYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKM 446

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
              G  P+ I Y+ L++  CK+G L+EA      M   G + DH T   ++      G L
Sbjct: 447 YKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKL 506

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
                  N+M R GL P  VT+  +I+ +   G    AF  F +M   G  P++ TY  L
Sbjct: 507 EEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGL 566

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL---INENCNAGNWQEALRLYKEMLD 691
           + GLC    I++A   F  +     +PN     I    +   C +GN  +A+ L  EM+ 
Sbjct: 567 LKGLCIGGHINEALKFFHRLR---CIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVT 623

Query: 692 REIEPDYCTHSALL 705
            +  PD  T++ L+
Sbjct: 624 NDFLPDNFTYTNLI 637



 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 156/530 (29%), Positives = 256/530 (48%), Gaps = 40/530 (7%)

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
           +I  L  NG   +A ++   M +  + P +VT++ +++ F + G++  A E++ +M   G
Sbjct: 391 MIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTG 450

Query: 274 CSPNGVTY-----------------------------------NVLITGFSRNGELEQAR 298
             PNG+ Y                                   NVL+  F R G+LE+A 
Sbjct: 451 LVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAE 510

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
             +  M ++GL  ++ +++ II GY   G  ++A ++ ++M + G  P+L TY  L+ GL
Sbjct: 511 YFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGL 570

Query: 359 CKWGRVSDARHRFFEMLR--KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           C  G +++A  +FF  LR   N + ++I +NT L   CRSGN+ +A  L +E+ + + +P
Sbjct: 571 CIGGHINEAL-KFFHRLRCIPNAVDNVI-FNTKLTSTCRSGNLSDAIALINEMVTNDFLP 628

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL-PDVITYTIMVNGSCKMGNLSMAREF 475
              TY  LI GLC+ G +  A  L    I +G+L P+   YT +V+G  K G+   A   
Sbjct: 629 DNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYI 688

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
           F EML K ++PD  A+   I    + G TS+   +   M +K    +L TYN+L+HG  K
Sbjct: 689 FEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAK 748

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
             ++     L + M+  GF+PD  ++ S+I    +         +   +  +G      T
Sbjct: 749 RHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFT 808

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           + +LI     R  ++ AF    +M    + PNV TYNAL NGL R     +A+ +   + 
Sbjct: 809 FNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLL 868

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           E G +P    Y  LIN  C  GN + A++L  EM    I       SA++
Sbjct: 869 ESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIV 918



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 151/558 (27%), Positives = 269/558 (48%), Gaps = 44/558 (7%)

Query: 177  DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
            ++L+  + +   +E+     N M R GL P+    + II    ++G ++KA  V+  M  
Sbjct: 494  NVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNS 553

Query: 237  FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGV---TYNVLITGFSRNGE 293
            FG  PS+ TY  +L   C  G + EAL+    ++   C PN V    +N  +T   R+G 
Sbjct: 554  FGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLR---CIPNAVDNVIFNTKLTSTCRSGN 610

Query: 294  LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV-APTLATYN 352
            L  A  LI +M+         +Y  +I G  +KG +V AL L  + + +G+ +P  A Y 
Sbjct: 611  LSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYT 670

Query: 353  ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
             L+ GL K G    A + F EML K+V PD +++N ++  Y R G   +   +   ++S+
Sbjct: 671  SLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSK 730

Query: 413  NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
            NL   + TYN L+ G  +   +     L ++MI  G LPD  ++  ++ G C+  +  +A
Sbjct: 731  NLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVA 790

Query: 473  REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
             +    +  +G   DRF +   I    +  +  +A+ L ++M      P++ TYN L +G
Sbjct: 791  IKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNG 850

Query: 533  LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS-- 590
            L +     +A+ +L+ ++  G +P +  Y ++I+    +G+++    L + M   G+S  
Sbjct: 851  LIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSH 910

Query: 591  ---------------------------------PTLVTYTVLIHAHAARGRLELAFMYFS 617
                                             PT+ T+T L+H +     +  A    S
Sbjct: 911  NVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRS 970

Query: 618  EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
             M+   ++ +V+ YN LI+GLC    I+ A+ L+ +M++  + PN   Y +LI+  C AG
Sbjct: 971  IMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFC-AG 1029

Query: 678  NWQ-EALRLYKEMLDREI 694
            N+Q E+ +L +++ DRE+
Sbjct: 1030 NYQIESEKLLRDIQDREL 1047



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 96/371 (25%), Positives = 181/371 (48%), Gaps = 24/371 (6%)

Query: 126  VFCTILEILIESGLLRSAYWVVETVV-------CVNMHGILDVLIGGGLSS--------- 169
            V+ ++++ L++ G  R+A ++ E ++        V  + I+D     G +S         
Sbjct: 668  VYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTM 727

Query: 170  -----CVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNR-IIKVLRDNGF 223
                 C ++   ++LL  Y K+  + +C +++  M+R+G LPD  + +  I+   +   F
Sbjct: 728  KSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSF 787

Query: 224  SVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNV 283
             V A ++ R +   G      T+N ++  FC+  EM++A EL+ +M      PN  TYN 
Sbjct: 788  DV-AIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNA 846

Query: 284  LITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG 343
            L  G  R  +  +A  +++ +L+ G   +   Y  +I G    G +  A+ L++EM T G
Sbjct: 847  LFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLG 906

Query: 344  VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF 403
            ++      + ++ GL    ++ +A      ML   +IP + ++ TL++ YC+  N+ +A 
Sbjct: 907  ISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKAL 966

Query: 404  LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
             L   +   ++   VV YN LI GLC  GD+E A +L E M  + + P+   Y ++++  
Sbjct: 967  ELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSF 1026

Query: 464  CKMGNLSMARE 474
            C  GN  +  E
Sbjct: 1027 CA-GNYQIESE 1036


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  275 bits (704), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 179/602 (29%), Positives = 292/602 (48%), Gaps = 63/602 (10%)

Query: 93  LVRVLNRIREKPRIALRFFRWVETQPGVKRDEFV--FCTILEILIESGLLRSAYWVVETV 150
           L+ VL  I+   R+ L FF W      ++RD  +   C + +I   S  L+ A  +++  
Sbjct: 97  LIWVLMNIKNDYRLVLSFFEWA----CLRRDPSLEARCIVAQIATASKDLKMARKLIQ-- 150

Query: 151 VCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKN 210
                    D  +   L   VS          + +K        +F+KML  GLL  V +
Sbjct: 151 ---------DFWVNPNLDVGVS----------FARK--------LFDKMLNYGLLISVDS 183

Query: 211 CNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQ 270
           CN  I  L ++   +K      + GE+                         L+L+ EMQ
Sbjct: 184 CNLFISHLSEDLDGIKIA----LKGEW------------------------VLKLIEEMQ 215

Query: 271 GRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLV 330
            +G  PN  TYN +I    + G++ +A  ++R+M+  G+      Y  +I G+ + G + 
Sbjct: 216 IKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVS 275

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
            A  L +EM  R ++P   TY  +I GLC+ GRV +A   F EM+ K + PD ++Y  L+
Sbjct: 276 SAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALI 335

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
            GYC+ G + EAF L +++    L P +VTY  L DGLC+ G+++ A +L   M  +G+ 
Sbjct: 336 DGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLE 395

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
            ++ TY  +VNG CK GN+  A +   +M   G  PD   YTT +    K  +   A+ L
Sbjct: 396 LNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHEL 455

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
             +ML +   P ++T+NVL++G C  G LE+  +LL+ M+  G +P+  TY S+I     
Sbjct: 456 LRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCI 515

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
             ++R   +++  M  KG+ P   TY +LI  H     ++ A+    +M  KG    V +
Sbjct: 516 RNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSS 575

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           YNALI G  + ++  +A  LF  M  EG++ ++  Y I  + N + G  +  L L  E +
Sbjct: 576 YNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAI 635

Query: 691 DR 692
           ++
Sbjct: 636 EK 637



 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 150/416 (36%), Positives = 230/416 (55%), Gaps = 7/416 (1%)

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEK--GLLVE-----ALNLEEEMVTRGVAPTLA 349
           AR L   ML  GL +S  S N  I   SE   G+ +       L L EEM  +G+ P   
Sbjct: 165 ARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPY 224

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           TYN +I  LCK G+V++A     EM+ + + PD + Y TL+ G+C+ GN+  A+ LFDE+
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM 284

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
           + R + P  +TY  +I GLC+ G +  A +L   M+ + + PD +TYT +++G CK G +
Sbjct: 285 QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKM 344

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A    N+ML+ GL P+   YT    G  K G+   A  L  EM  KG   ++ TYN L
Sbjct: 345 KEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSL 404

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           V+GLCK G++++A +L++ M   GF PD +TYT+++ A  +  ++ R  +L   ML + L
Sbjct: 405 VNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDREL 464

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
            PT+VT+ VL++     G LE        M  KGI PN  TYN+LI   C    +     
Sbjct: 465 QPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTE 524

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           ++  M  +G++P+  TY ILI  +C A N +EA  L+++M+ +       +++AL+
Sbjct: 525 IYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALI 580



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 98/295 (33%), Positives = 154/295 (52%), Gaps = 7/295 (2%)

Query: 437 AQQLKENMINQGILPDVITYTIMVNG-SCKMGNLSMARE------FFNEMLRKGLQPDRF 489
           A++L + M+N G+L  V +  + ++  S  +  + +A +         EM  KGL+P+ +
Sbjct: 165 ARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPY 224

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
            Y   I    K G  +EA R+  EM+++G  PD + Y  L+ G CKLG++  A  L  +M
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM 284

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRL 609
                 PD ITYT++I    + G +     LF+ M+ K L P  VTYT LI  +   G++
Sbjct: 285 QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKM 344

Query: 610 ELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL 669
           + AF   ++M   G+ PN++TY AL +GLC+   +D A  L  +M  +G+  N YTY  L
Sbjct: 345 KEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSL 404

Query: 670 INENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           +N  C AGN  +A++L K+M      PD  T++ L+         V A E L  +
Sbjct: 405 VNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQM 459


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  275 bits (703), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 193/698 (27%), Positives = 312/698 (44%), Gaps = 109/698 (15%)

Query: 95  RVLNRIREK--PRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVET--- 149
           R+LN++ +   P +A   +  +    GV  DEF    + +     G +  A   VE    
Sbjct: 188 RLLNKLVQSGDPGMAAMVYGQMRIA-GVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEG 246

Query: 150 ----VVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLL 205
               V  V  H ++D   G G +                     E    +   + R GL 
Sbjct: 247 MGLEVNLVAYHAVMDCYCGMGWT---------------------EDARRILESLQRKGLS 285

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG-IKPSIVTYNTMLDSFCKEGEMQEALE 264
           P+V     ++K    +G   +A  V + M E G I    V Y  M++ +C+ G M +A  
Sbjct: 286 PNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATR 345

Query: 265 LLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYS 324
           +  EM+  G   N   YN +I G  + G +E+ + ++++M  +G++   +SYN +I GY 
Sbjct: 346 VRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYC 405

Query: 325 EKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDII 384
            +G + +A  +   MV  G+A T  TYN L+ G C    + DA   +F ML++ V P+ I
Sbjct: 406 REGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEI 465

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
           S +TLL G  ++G   +A  L+ E  +R L   V+T+NT+I+GLC+ G +  A++L + M
Sbjct: 466 SCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRM 525

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
                 PD +TY  + +G CK+G L  A    N+M   G  P    + + I G       
Sbjct: 526 KELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQW 585

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL------------------------- 539
            +   +  EM A+G  P+L+TY  L+ G CK G+L                         
Sbjct: 586 HKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSAL 645

Query: 540 ----------EEANELLRKMVGDGFIPD--------------------------HITYTS 563
                     +EAN +L+K+V    IP                           ++ +  
Sbjct: 646 MSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNV 705

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           II    + G +   + LF ++  K   P   TY+ LIH  AA G ++ AF     M   G
Sbjct: 706 IIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAG 765

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGN----- 678
           + PN+ITYN+LI GLC+  ++ +A  LF  ++ +GI PN  TY  LI+E C  G      
Sbjct: 766 LTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAF 825

Query: 679 -----------WQEALRLYKEMLDREIEPDYCTHSALL 705
                       +EA++L  +M++  ++P+Y T+  L+
Sbjct: 826 KLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLI 863



 Score =  265 bits (676), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 189/678 (27%), Positives = 307/678 (45%), Gaps = 67/678 (9%)

Query: 90  PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVET 149
           P LL   L R+R  P  AL  FR   ++P +         +L IL  +     A  ++ +
Sbjct: 70  PALLQAALRRVRLDPDAALHLFRLAPSRPSL----VSHAQLLHILARARRFHDARALLSS 125

Query: 150 VVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVK 209
           +   +   +   L         S    DLLL  +     +   L VF+ M + G  P ++
Sbjct: 126 LP-PHAEPLFPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLR 184

Query: 210 NCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM 269
           +CNR++  L  +G    A  VY  M   G+ P   T   M  ++C++G + +A+E + EM
Sbjct: 185 SCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEM 244

Query: 270 QG-----------------------------------RGCSPNGVTYNVLITGFSRNGEL 294
           +G                                   +G SPN VTY +L+ G+ ++G +
Sbjct: 245 EGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRM 304

Query: 295 EQARGLIRDMLKLG-LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           E+A  ++++M + G + V   +Y  +I GY ++G + +A  +  EM   G+   L  YN 
Sbjct: 305 EEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNT 364

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           +I GLCK GR+ + +    EM    + PD  SYNTL+ GYCR G++ +AF +   +    
Sbjct: 365 MINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNG 424

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           L  T +TYNTL+ G C    ++ A +L   M+ +G+ P+ I+ + +++G  K G    A 
Sbjct: 425 LAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQAL 484

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
             + E L +GL  +   + T I G  K+G  +EA  L + M     PPD +TY  L  G 
Sbjct: 485 NLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGY 544

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
           CKLG L  A  L+ KM   GF P    + S I          +  D+ + M  +GLSP L
Sbjct: 545 CKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNL 604

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
           VTY  LI      G L  A   + EM   G+ PNV   +AL++   +  ++D+A  +   
Sbjct: 605 VTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQK 664

Query: 654 MEEEGILPNKYTYTILINEN--------------------------CNAGNWQEALRLYK 687
           +    ++P     TI I++                           C +G   +A  L++
Sbjct: 665 LVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFE 724

Query: 688 EMLDREIEPDYCTHSALL 705
            + ++   PD  T+S+L+
Sbjct: 725 SLRNKRFLPDNFTYSSLI 742



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 166/556 (29%), Positives = 273/556 (49%), Gaps = 42/556 (7%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y ++  ++    V N+M   G+  ++   N +I  L   G   + ++V + M + G++P 
Sbjct: 334 YCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPD 393

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             +YNT++D +C+EG M++A E+   M   G +   +TYN L+ GF     ++ A  L  
Sbjct: 394 KYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWF 453

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            MLK G+  +  S + ++ G  + G   +ALNL +E + RG+A  + T+N +I GLCK G
Sbjct: 454 LMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIG 513

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R+++A      M      PD ++Y TL  GYC+ G +G A  L +++      P+V  +N
Sbjct: 514 RMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFN 573

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           + I G            +   M  +G+ P+++TY  ++ G CK GNL  A   + EM+  
Sbjct: 574 SFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNN 633

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM-------------------------LAK 517
           G+ P+ F  +  ++   K G   EA  + +++                         +A 
Sbjct: 634 GMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIAD 693

Query: 518 GFPPDL-ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
           G P    + +NV++ GLCK G + +A  L   +    F+PD+ TY+S+IH     G +  
Sbjct: 694 GNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDE 753

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
              L + ML  GL+P ++TY  LI+     G+L  A   F+++Q KGI PN ITYN LI+
Sbjct: 754 AFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLID 813

Query: 637 GLCRLRRIDQAYGLFIDMEEEGIL----------------PNKYTYTILINENCNAGNWQ 680
             C+  +  +A+ L   M EEG +                PN  TY  LI+    +GN +
Sbjct: 814 EYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNME 873

Query: 681 EALRLYKEMLDREIEP 696
           E  +LY EM  R + P
Sbjct: 874 EISKLYDEMHIRGLLP 889



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 139/535 (25%), Positives = 255/535 (47%), Gaps = 94/535 (17%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G++ D++ + T+++     G +R A+ +              +++  GL++  +    + 
Sbjct: 389 GMRPDKYSYNTLIDGYCREGSMRKAFEMCR------------MMVRNGLAA--TTLTYNT 434

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL  +     ++  L ++  ML+ G+ P+  +C+ ++  L   G + +A  +++     G
Sbjct: 435 LLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARG 494

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           +  +++T+NT+++  CK G M EA ELL  M+   C P+ +TY  L  G+ + G+L  A 
Sbjct: 495 LAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTAT 554

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L+  M  LG   S   +N  I G+       +  ++  EM  RG++P L TY  LI G 
Sbjct: 555 HLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGW 614

Query: 359 CKW-----------------------------------GRVSDARHRFFEMLRKNVIP-- 381
           CK                                    G+V +A     +++  ++IP  
Sbjct: 615 CKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGC 674

Query: 382 -------DIIS-----------------YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
                  D IS                 +N +++G C+SG I +A  LF+ LR++  +P 
Sbjct: 675 SISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPD 734

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
             TY++LI G    G ++ A  L++ M++ G+ P++ITY  ++ G CK G LS A   FN
Sbjct: 735 NFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFN 794

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           ++  KG+ P+   Y T I    K G T+EA++L+++M+ +G+                  
Sbjct: 795 KLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGY------------------ 836

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
            +EEA +LL +M+ +   P++ITY ++IH  ++ G++     L++ M  +GL PT
Sbjct: 837 -MEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPT 890



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 86/206 (41%), Gaps = 26/206 (12%)

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           P L+++  L+H L +     +A  LL  +      P H                     L
Sbjct: 98  PSLVSHAQLLHILARARRFHDARALLSSL------PPH------------------AEPL 133

Query: 581 FNNMLR--KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           F ++    +  + + V++ +L+ AHA  G+L  A   F  M   G RP++ + N L+N L
Sbjct: 134 FPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKL 193

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
            +      A  ++  M   G+LP+++T  I+    C  G   +A+   +EM    +E + 
Sbjct: 194 VQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNL 253

Query: 699 CTHSALLLKQLDKDYKVHAVEYLESL 724
             + A++       +   A   LESL
Sbjct: 254 VAYHAVMDCYCGMGWTEDARRILESL 279


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  275 bits (703), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 186/648 (28%), Positives = 303/648 (46%), Gaps = 64/648 (9%)

Query: 95  RVLNRIREKP--RIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVC 152
           ++L+ +R +P    AL  F+W   QP       VF  +L  L  +G   S   ++     
Sbjct: 61  QLLDLLRRQPDSSSALSLFQWASAQPNYSAHPSVFHELLRQLARAGSFDSMLTLLR---- 116

Query: 153 VNMHGILDVLIGGGLSSCVSIKILDLLLLI---YTKKSMVEQCLLVFNKMLRN-GLLPDV 208
             MH           SS + +     L+ +    T   +  +   +F  M R+  + PD 
Sbjct: 117 -QMH-----------SSKIPVDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDT 164

Query: 209 KNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWE 268
           +  N  + +L           ++  M    + P + T+N ++ + CK  +++ A+ +L +
Sbjct: 165 RFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLED 224

Query: 269 MQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
           M   G  P+  T+  L+ GF    ++E A  +   M++ G ++++ S N ++ G  ++G 
Sbjct: 225 MPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGR 284

Query: 329 LVEALNL--EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISY 386
           + EAL    EEE    G  P   T+N L+ GLC+ G +         ML K    D+ +Y
Sbjct: 285 IEEALRFIYEEE----GFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTY 340

Query: 387 NTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMIN 446
           N+L+ G C+ G I EA  +   + SR+  P  VTYNTLI  LC+   +E A +L   + +
Sbjct: 341 NSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTS 400

Query: 447 QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT-------------- 492
           +G+LPDV T+  ++ G C   N  +A E F EM  KG  PD F Y+              
Sbjct: 401 KGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKE 460

Query: 493 ---------------------TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
                                T I G  K     +A  + ++M   G     +TYN L++
Sbjct: 461 ALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLIN 520

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           GLCK   +EEA +L+ +M+ +G  PD  TYT+++    + GD++R  D+  NM   G  P
Sbjct: 521 GLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEP 580

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
            +VTY  LI      GR+++A      +Q+KG+      YN +I  LC+ +R  +A  LF
Sbjct: 581 DIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLF 640

Query: 652 IDMEEEGILPNKYTYTILINENCNAGN-WQEALRLYKEMLDREIEPDY 698
            +M E+G  P+  TY I+    CN G   QEA+    EML++ I P++
Sbjct: 641 REMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEF 688



 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 164/584 (28%), Positives = 283/584 (48%), Gaps = 17/584 (2%)

Query: 110 FFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSS 169
            F  +E    VK D   +   L +L+++  L+    +VET     +H     ++   +  
Sbjct: 150 LFLLMERDFAVKPDTRFYNVALSLLVKANKLK----LVET-----LHS---KMVADAVPP 197

Query: 170 CVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE 229
            VS    ++L+    K   +   +L+   M   GL PD K    +++   +      A  
Sbjct: 198 DVST--FNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALR 255

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           +  +M E G + + V+ N +++  CKEG ++EAL  ++E +  G  P+ VT+N L+ G  
Sbjct: 256 IKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYEEE--GFCPDQVTFNALVNGLC 313

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           R G ++Q   ++  ML+ G ++  ++YN +I G  + G + EA+ +   MV+R   P   
Sbjct: 314 RTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTV 373

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           TYN LI  LCK   V  A      +  K V+PD+ ++N+L+ G C + N   A  LF+E+
Sbjct: 374 TYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEM 433

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
           + +   P   TY+ LI+ LC    L+ A  L + M   G   +V+ Y  +++G CK   +
Sbjct: 434 KEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRV 493

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A + F++M   G+      Y T I G  K     EA +L ++M+ +G  PD  TY  +
Sbjct: 494 GDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTM 553

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           +   C+ G ++ A ++++ M  +G  PD +TY ++I    + G +     L  ++  KG+
Sbjct: 554 LKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGM 613

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR-LRRIDQAY 648
             T   Y  +I A   R R + A   F EM  KG  P+VITY  +  GLC     I +A 
Sbjct: 614 VLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAV 673

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
              ++M E+GILP   ++  L    C+       ++L   ++++
Sbjct: 674 DFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEK 717



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 144/529 (27%), Positives = 254/529 (48%), Gaps = 9/529 (1%)

Query: 205 LPDVKNCNRIIKVLRDNGFSVKAREVYR---MMGEFGIKPSIVTYNTMLDSFCKEGEMQE 261
           LP   + ++++ +LR    S  A  +++       +   PS+  ++ +L    + G    
Sbjct: 53  LPPDFSPSQLLDLLRRQPDSSSALSLFQWASAQPNYSAHPSV--FHELLRQLARAGSFDS 110

Query: 262 ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK--LGLKVSAHSYNPI 319
            L LL +M       +  T+ + +  ++ +  L      +  +++    +K     YN  
Sbjct: 111 MLTLLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVA 170

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           +    +   L     L  +MV   V P ++T+NILI  LCK  ++  A     +M    +
Sbjct: 171 LSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGL 230

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
            PD  ++ TL+ G+    ++  A  + + +       T V+ N L++GLC+ G +E A  
Sbjct: 231 RPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEA-- 288

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           L+     +G  PD +T+  +VNG C+ G++    E  + ML KG + D + Y + I+G  
Sbjct: 289 LRFIYEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLC 348

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           KLG+  EA  +   M+++   P+ +TYN L+  LCK   +E A EL R +   G +PD  
Sbjct: 349 KLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVC 408

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
           T+ S+I       +     +LF  M  KG  P   TY++LI +  +  RL+ A M   EM
Sbjct: 409 TFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEM 468

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
           ++ G   NV+ YN LI+GLC+  R+  A  +F  ME  G+  +  TY  LIN  C +   
Sbjct: 469 ELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRV 528

Query: 680 QEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLGA 728
           +EA +L  +M+   ++PD  T++ +L     +     A + ++++TL  
Sbjct: 529 EEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNG 577



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 164/605 (27%), Positives = 252/605 (41%), Gaps = 105/605 (17%)

Query: 46  KDSVLNPESESY--YKELIISTVEEKPWAFCNNRWVSDHFQAVVSDPELLVRVLNRIRE- 102
           +D  + P++  Y     L++   + K     +++ V+D     VS   +L+R L +  + 
Sbjct: 156 RDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQL 215

Query: 103 KPRIALRFFRWVETQP--GVKRDEFVFCTILEILIESGLLRSAYWVVETVV---CVNMHG 157
           +P I +     +E  P  G++ DE  F T+++  IE   +  A  + E +V   C     
Sbjct: 216 RPAILM-----LEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSV 270

Query: 158 ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
            ++VL+ G    C   +I + L  IY ++                G  PD    N ++  
Sbjct: 271 SVNVLVNG---LCKEGRIEEALRFIYEEE----------------GFCPDQVTFNALVNG 311

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
           L   G   +  E+   M E G +  + TYN+++   CK GE+ EA+E+L  M  R C PN
Sbjct: 312 LCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPN 371

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG--------------- 322
            VTYN LI    +   +E A  L R +   G+     ++N +I G               
Sbjct: 372 TVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFE 431

Query: 323 -YSEKGL-------------------LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
              EKG                    L EAL L +EM   G A  +  YN LI GLCK  
Sbjct: 432 EMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNN 491

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           RV DA   F +M    V    ++YNTL+ G C+S  + EA  L D++    L P   TY 
Sbjct: 492 RVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYT 551

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF------- 475
           T++   C+ GD++ A  + +NM   G  PD++TY  ++ G CK G + +A +        
Sbjct: 552 TMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMK 611

Query: 476 ----------------------------FNEMLRKGLQPDRFAYTTQIAGELKLG-DTSE 506
                                       F EM+ KG  PD   Y     G    G    E
Sbjct: 612 GMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQE 671

Query: 507 AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
           A     EML KG  P+  ++  L  GLC L   +   +L+  ++  G      + TSII 
Sbjct: 672 AVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEKGRFSQ--SETSIIR 729

Query: 567 ASLEM 571
             L++
Sbjct: 730 GFLKI 734


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  275 bits (703), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 168/522 (32%), Positives = 265/522 (50%), Gaps = 6/522 (1%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV---LRDNGFSVKAR 228
           SI     LL+  TK       L + ++M   G+ P++   N +I     L+  GF   A 
Sbjct: 67  SIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGF---AF 123

Query: 229 EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
            V   + + G +P+I T+NT++   C EG++ E L L  +M G G  PN VTY  LI G 
Sbjct: 124 SVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGL 183

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
            + G    A  L+R M +   +     Y  II    +   + +A NL  EM+ +G++P++
Sbjct: 184 CKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSI 243

Query: 349 ATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDE 408
            TYN LI+ LC             EM+   ++P+++ ++T++   C+ G + EA  + D 
Sbjct: 244 FTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDM 303

Query: 409 LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
           +  R + P VVTYN L+DG C   +++ A ++ + M+ +G  PDV++Y+ ++NG CK+  
Sbjct: 304 MIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQR 363

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
           +  A   F EM RK L P+   Y+T + G   +G   +A  L  EM+ +G  PD ++Y +
Sbjct: 364 IEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCI 423

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           L+  LCK   L+EA  LL+ + G    PD   YT +I      G+L   RDLF+N+  KG
Sbjct: 424 LLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKG 483

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
           L P + TYT++I+    +G L  A   F EM+ KG  PN  TYN +  G  R     +  
Sbjct: 484 LHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGI 543

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
            L  +M   G   +  T T+L+    + G  Q   ++  E L
Sbjct: 544 QLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFL 585



 Score =  275 bits (702), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 144/484 (29%), Positives = 257/484 (53%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PSI  +  +L S  K       L L  +M   G  PN  T N+LI  F     L  A  +
Sbjct: 66  PSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSV 125

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  +LKLG + +  ++N +I G   +G + E L+L ++M+  G  P + TY  LI GLCK
Sbjct: 126 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 185

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G  S A      M + N  PD++ Y +++   C+   + +AF LF E+  + + P++ T
Sbjct: 186 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 245

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YN+LI  LC   + +    L   M+N  I+P+V+ ++ +V+  CK G +  A +  + M+
Sbjct: 246 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMI 305

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           ++G++P+   Y   + G     +  EA ++ + M+ KGF PD+++Y+ L++G CK+  +E
Sbjct: 306 KRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIE 365

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           +A  L  +M     IP+ +TY++++H    +G L+    LF+ M+ +G  P  V+Y +L+
Sbjct: 366 KAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILL 425

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                  RL+ A      ++   + P++  Y  +I+G+CR   ++ A  LF ++  +G+ 
Sbjct: 426 DYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLH 485

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
           PN +TYTI+IN  C  G   EA +L+ EM  +   P+ CT++ +    L  +  +  ++ 
Sbjct: 486 PNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQL 545

Query: 721 LESL 724
           L+ +
Sbjct: 546 LQEM 549



 Score =  263 bits (671), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 156/524 (29%), Positives = 260/524 (49%), Gaps = 1/524 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           ++  L  FN+ML     P + +  +++  +           +   M  FGI P+I T N 
Sbjct: 49  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 108

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++SFC    +  A  +L ++   G  PN  T+N LI G    G++ +   L   M+  G
Sbjct: 109 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 168

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            + +  +Y  +I G  + G    A+ L   M      P +  Y  +I  LCK  +V+ A 
Sbjct: 169 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 228

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
           + F EM+ + + P I +YN+L++  C          L +E+ +  ++P VV ++T++D L
Sbjct: 229 NLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDAL 288

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G +  A  + + MI +G+ P+V+TY  +++G C    +  A + F+ M+ KG  PD 
Sbjct: 289 CKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDV 348

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
            +Y+T I G  K+    +A  L EEM  K   P+ +TY+ L+HGLC +G L++A  L  +
Sbjct: 349 VSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHE 408

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           MV  G IPD ++Y  ++    +   L     L   +    + P +  YT++I      G 
Sbjct: 409 MVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGE 468

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           LE A   FS +  KG+ PNV TY  +INGLC+   + +A  LF +M+ +G  PN  TY +
Sbjct: 469 LEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNL 528

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
           +             ++L +EML R    D  T S +L++ L  D
Sbjct: 529 ITRGFLRNNETLRGIQLLQEMLARGFSADVST-STVLVEMLSDD 571



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 124/496 (25%), Positives = 213/496 (42%), Gaps = 93/496 (18%)

Query: 76  NRWVSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILI 135
           ++ + + FQ  V     L+  L ++      A+R  R +E Q   + D  V+ +I++ L 
Sbjct: 162 DKMIGEGFQPNVVTYGTLINGLCKVGSTSA-AIRLLRSME-QGNCQPDVVVYTSIIDSLC 219

Query: 136 ESGLLRSAY---------WVVETVVCVN--MHGILDVL----IGGGLSSCVSIKILDLLL 180
           +   +  A+          +  ++   N  +H + ++     +   L+  V+ KI+  ++
Sbjct: 220 KDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVV 279

Query: 181 LIYT------KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           +  T      K+  V +   V + M++ G+ P+V   N ++          +A +V+  M
Sbjct: 280 IFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTM 339

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
              G  P +V+Y+T+++ +CK   +++A+ L  EM  +   PN VTY+ L+ G    G L
Sbjct: 340 VCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRL 399

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           +                                   +A+ L  EMVTRG  P   +Y IL
Sbjct: 400 Q-----------------------------------DAIALFHEMVTRGQIPDFVSYCIL 424

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           +  LCK  R+ +A      +   N+ PDI  Y  ++ G CR+G +  A  LF  L S+ L
Sbjct: 425 LDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGL 484

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P V TY  +I+GLC+ G L  A +L   M  +G  P+  TY ++  G  +         
Sbjct: 485 HPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRN-------- 536

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
             NE LR G+Q                        L +EMLA+GF  D+ T  VLV  L 
Sbjct: 537 --NETLR-GIQ------------------------LLQEMLARGFSADVSTSTVLVEMLS 569

Query: 535 KLGSLEEANELLRKMV 550
             G  +   ++L + +
Sbjct: 570 DDGLDQSVKQILSEFL 585


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  275 bits (703), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 168/522 (32%), Positives = 265/522 (50%), Gaps = 6/522 (1%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV---LRDNGFSVKAR 228
           SI     LL+  TK       L + ++M   G+ P++   N +I     L+  GF   A 
Sbjct: 58  SIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGF---AF 114

Query: 229 EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
            V   + + G +P+I T+NT++   C EG++ E L L  +M G G  PN VTY  LI G 
Sbjct: 115 SVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGL 174

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
            + G    A  L+R M +   +     Y  II    +   + +A NL  EM+ +G++P++
Sbjct: 175 CKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSI 234

Query: 349 ATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDE 408
            TYN LI+ LC             EM+   ++P+++ ++T++   C+ G + EA  + D 
Sbjct: 235 FTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDM 294

Query: 409 LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
           +  R + P VVTYN L+DG C   +++ A ++ + M+ +G  PDV++Y+ ++NG CK+  
Sbjct: 295 MIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQR 354

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
           +  A   F EM RK L P+   Y+T + G   +G   +A  L  EM+ +G  PD ++Y +
Sbjct: 355 IEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCI 414

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           L+  LCK   L+EA  LL+ + G    PD   YT +I      G+L   RDLF+N+  KG
Sbjct: 415 LLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKG 474

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
           L P + TYT++I+    +G L  A   F EM+ KG  PN  TYN +  G  R     +  
Sbjct: 475 LHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGI 534

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
            L  +M   G   +  T T+L+    + G  Q   ++  E L
Sbjct: 535 QLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFL 576



 Score =  275 bits (702), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 144/484 (29%), Positives = 257/484 (53%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PSI  +  +L S  K       L L  +M   G  PN  T N+LI  F     L  A  +
Sbjct: 57  PSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSV 116

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  +LKLG + +  ++N +I G   +G + E L+L ++M+  G  P + TY  LI GLCK
Sbjct: 117 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 176

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G  S A      M + N  PD++ Y +++   C+   + +AF LF E+  + + P++ T
Sbjct: 177 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 236

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YN+LI  LC   + +    L   M+N  I+P+V+ ++ +V+  CK G +  A +  + M+
Sbjct: 237 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMI 296

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           ++G++P+   Y   + G     +  EA ++ + M+ KGF PD+++Y+ L++G CK+  +E
Sbjct: 297 KRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIE 356

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           +A  L  +M     IP+ +TY++++H    +G L+    LF+ M+ +G  P  V+Y +L+
Sbjct: 357 KAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILL 416

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                  RL+ A      ++   + P++  Y  +I+G+CR   ++ A  LF ++  +G+ 
Sbjct: 417 DYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLH 476

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
           PN +TYTI+IN  C  G   EA +L+ EM  +   P+ CT++ +    L  +  +  ++ 
Sbjct: 477 PNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQL 536

Query: 721 LESL 724
           L+ +
Sbjct: 537 LQEM 540



 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 156/524 (29%), Positives = 260/524 (49%), Gaps = 1/524 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           ++  L  FN+ML     P + +  +++  +           +   M  FGI P+I T N 
Sbjct: 40  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 99

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++SFC    +  A  +L ++   G  PN  T+N LI G    G++ +   L   M+  G
Sbjct: 100 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 159

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            + +  +Y  +I G  + G    A+ L   M      P +  Y  +I  LCK  +V+ A 
Sbjct: 160 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 219

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
           + F EM+ + + P I +YN+L++  C          L +E+ +  ++P VV ++T++D L
Sbjct: 220 NLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDAL 279

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G +  A  + + MI +G+ P+V+TY  +++G C    +  A + F+ M+ KG  PD 
Sbjct: 280 CKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDV 339

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
            +Y+T I G  K+    +A  L EEM  K   P+ +TY+ L+HGLC +G L++A  L  +
Sbjct: 340 VSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHE 399

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           MV  G IPD ++Y  ++    +   L     L   +    + P +  YT++I      G 
Sbjct: 400 MVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGE 459

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           LE A   FS +  KG+ PNV TY  +INGLC+   + +A  LF +M+ +G  PN  TY +
Sbjct: 460 LEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNL 519

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
           +             ++L +EML R    D  T S +L++ L  D
Sbjct: 520 ITRGFLRNNETLRGIQLLQEMLARGFSADVST-STVLVEMLSDD 562



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 124/496 (25%), Positives = 213/496 (42%), Gaps = 93/496 (18%)

Query: 76  NRWVSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILI 135
           ++ + + FQ  V     L+  L ++      A+R  R +E Q   + D  V+ +I++ L 
Sbjct: 153 DKMIGEGFQPNVVTYGTLINGLCKVGSTSA-AIRLLRSME-QGNCQPDVVVYTSIIDSLC 210

Query: 136 ESGLLRSAY---------WVVETVVCVN--MHGILDVL----IGGGLSSCVSIKILDLLL 180
           +   +  A+          +  ++   N  +H + ++     +   L+  V+ KI+  ++
Sbjct: 211 KDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVV 270

Query: 181 LIYT------KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           +  T      K+  V +   V + M++ G+ P+V   N ++          +A +V+  M
Sbjct: 271 IFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTM 330

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
              G  P +V+Y+T+++ +CK   +++A+ L  EM  +   PN VTY+ L+ G    G L
Sbjct: 331 VCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRL 390

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           +                                   +A+ L  EMVTRG  P   +Y IL
Sbjct: 391 Q-----------------------------------DAIALFHEMVTRGQIPDFVSYCIL 415

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           +  LCK  R+ +A      +   N+ PDI  Y  ++ G CR+G +  A  LF  L S+ L
Sbjct: 416 LDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGL 475

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P V TY  +I+GLC+ G L  A +L   M  +G  P+  TY ++  G  +         
Sbjct: 476 HPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRN-------- 527

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
             NE LR G+Q                        L +EMLA+GF  D+ T  VLV  L 
Sbjct: 528 --NETLR-GIQ------------------------LLQEMLARGFSADVSTSTVLVEMLS 560

Query: 535 KLGSLEEANELLRKMV 550
             G  +   ++L + +
Sbjct: 561 DDGLDQSVKQILSEFL 576


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  275 bits (703), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 157/499 (31%), Positives = 257/499 (51%), Gaps = 2/499 (0%)

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM--QGRGCSPNGVTYNVLITG 287
           V R M + G  P++ +YN +L   C E   QEALELL  M   G  C P+ V+Y  +I G
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208

Query: 288 FSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPT 347
           F + G+L++A G   +ML  G+  +  +Y+ II    +   + +A+ +   MV  GV P 
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268

Query: 348 LATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFD 407
             TYN +++G C  G+  +A     +M    V PD+++YN+L+   C++G   EA  +FD
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328

Query: 408 ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG 467
            +  R L P + TY TL+ G    G L     L + M+  GI P+   ++I++    K G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
            +  A   F++M ++GL PD   Y T I    K G   +A R  E+M+ +   P  I YN
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
            L+H LC     ++A EL+ +M+  G   D I + SII +  + G +     LF+ M+R 
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
           G+ P ++TY+ LI  +   G+++ A    + M   G++P+ +TYN LING C++ R++ A
Sbjct: 509 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568

Query: 648 YGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLK 707
             LF +ME  G+ P+  TY I++           A  LY  + +   + +  T++ +L  
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHG 628

Query: 708 QLDKDYKVHAVEYLESLTL 726
               +    A+   ++L L
Sbjct: 629 LCKNNLTDEALRMFQNLCL 647



 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 149/487 (30%), Positives = 256/487 (52%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K+  +++    +++ML  G+LP+V   + II  L       KA EV   M + G+ P+
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             TYN+++  +C  G+ +EA+  L +M   G  P+ VTYN L+    +NG   +AR +  
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M K GLK    +Y  ++ GY+ KG LVE   L + MV  G+ P    ++ILI    K G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           +V  A   F +M ++ + PD ++Y T++   C+SG + +A   F+++    L P  + YN
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           +LI  LC +   + A++L   M+++GI  D I +  +++  CK G +  + + F+ M+R 
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G++PD   Y+T I G    G   EA +L   M++ G  PD +TYN L++G CK+  +E+A
Sbjct: 509 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             L R+M   G  PD ITY  I+    +       ++L+  +   G    L TY +++H 
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHG 628

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
                  + A   F  + +  ++    T+N +I  L ++ R D+A  LF  +   G++P+
Sbjct: 629 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688

Query: 663 KYTYTIL 669
             TY+++
Sbjct: 689 VRTYSLM 695



 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 162/520 (31%), Positives = 266/520 (51%), Gaps = 2/520 (0%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           +I    LL  +   K   +   +V  +M + G +P+V + N ++K L D   S +A E+ 
Sbjct: 126 AIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELL 185

Query: 232 RMMGEFG--IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           +MM + G    P +V+Y T+++ F KEG++ +A     EM  RG  PN VTY+ +I    
Sbjct: 186 QMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALC 245

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           +   +++A  ++  M+K G+  +  +YN I+ GY   G   EA+   ++M + GV P + 
Sbjct: 246 KAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVV 305

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           TYN L+  LCK GR ++AR  F  M ++ + P+I +Y TLL GY   G + E   L D +
Sbjct: 306 TYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 365

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
               + P    ++ LI    + G ++ A  +   M  QG+ PD +TY  ++   CK G +
Sbjct: 366 VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRV 425

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A  +F +M+ + L P    Y + I          +A  L  EML +G   D I +N +
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSI 485

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           +   CK G + E+ +L   MV  G  PD ITY+++I      G +     L  +M+  G+
Sbjct: 486 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGM 545

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
            P  VTY  LI+ +    R+E A + F EM+  G+ P++ITYN ++ GL + RR   A  
Sbjct: 546 KPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKE 605

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           L++ + E G      TY I+++  C      EALR+++ +
Sbjct: 606 LYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 645



 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 152/553 (27%), Positives = 266/553 (48%), Gaps = 44/553 (7%)

Query: 195 VFNKMLRNGLLPDVKNCN-RIIKVLRDNGFSVKAREVYRMMGEFG---IKPSIVTYNTML 250
           VF+++LR G    +   N  +  V R +  +  +R  Y  M   G   + P++ TY  ++
Sbjct: 41  VFDELLRRGRGASIYGLNCALADVARHSPAAAVSR--YNRMARAGADEVTPNLCTYGILI 98

Query: 251 DSFCKEGEM-----------------------------------QEALEL-LWEMQGRGC 274
            S C  G +                                    +A+++ L  M   GC
Sbjct: 99  GSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGC 158

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH--SYNPIICGYSEKGLLVEA 332
            PN  +YN+L+ G       ++A  L++ M   G        SY  +I G+ ++G L +A
Sbjct: 159 IPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKA 218

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
                EM+ RG+ P + TY+ +I  LCK   +  A      M++  V+P+  +YN++++G
Sbjct: 219 YGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHG 278

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
           YC SG   EA     ++ S  + P VVTYN+L+D LC+ G    A+++ ++M  +G+ P+
Sbjct: 279 YCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE 338

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
           + TY  ++ G    G L       + M+R G+ P+ + ++  I    K G   +A  +  
Sbjct: 339 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFS 398

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           +M  +G  PD +TY  ++  LCK G +E+A     +M+ +   P +I Y S+IH+     
Sbjct: 399 KMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFD 458

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
              + ++L   ML +G+    + +  +I +H   GR+  +   F  M   G++P++ITY+
Sbjct: 459 KWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYS 518

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
            LI+G C   ++D+A  L   M   G+ P+  TY  LIN  C     ++AL L++EM   
Sbjct: 519 TLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESS 578

Query: 693 EIEPDYCTHSALL 705
            + PD  T++ +L
Sbjct: 579 GVSPDIITYNIIL 591



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 140/498 (28%), Positives = 250/498 (50%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   +++ + V   M++NG++P+ +  N I+     +G   +A    + M   G++P +V
Sbjct: 246 KAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVV 305

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TYN+++D  CK G   EA ++   M  RG  P   TY  L+ G++  G L +  GL+  M
Sbjct: 306 TYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 365

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           ++ G+  + + ++ +IC Y+++G + +A+ +  +M  +G+ P   TY  +I  LCK GRV
Sbjct: 366 VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRV 425

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            DA   F +M+ + + P  I YN+L++  C      +A  L  E+  R +    + +N++
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSI 485

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           ID  C+ G +  +++L + M+  G+ PD+ITY+ +++G C  G +  A +    M+  G+
Sbjct: 486 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGM 545

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
           +PD   Y T I G  K+    +A  L  EM + G  PD+ITYN+++ GL +      A E
Sbjct: 546 KPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKE 605

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           L   +   G   +  TY  I+H   +         +F N+    L     T+ ++I A  
Sbjct: 606 LYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 665

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
             GR + A   F+ +   G+ P+V TY+ +   L     +++   LF+ MEE G   N  
Sbjct: 666 KVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSR 725

Query: 665 TYTILINENCNAGNWQEA 682
               ++ +    G+   A
Sbjct: 726 MLNSIVRKLLQRGDITRA 743



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/417 (29%), Positives = 205/417 (49%), Gaps = 7/417 (1%)

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG---VAPTLATY 351
           E AR +  ++L+ G   S +  N  +   +       A++    M   G   V P L TY
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSP-AAAVSRYNRMARAGADEVTPNLCTY 94

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF-LLFDELR 410
            ILI   C  GR+         +++K    D I++  LL G C      +A  ++   + 
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG--ILPDVITYTIMVNGSCKMGN 468
               +P V +YN L+ GLC     + A +L + M + G    PDV++YT ++NG  K G+
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
           L  A   ++EML +G+ P+   Y++ IA   K     +A  +   M+  G  P+  TYN 
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           +VHG C  G  +EA   L+KM  DG  PD +TY S++    + G     R +F++M ++G
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
           L P + TY  L+  +A +G L         M   GI PN   ++ LI    +  ++DQA 
Sbjct: 335 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            +F  M ++G+ P+  TY  +I   C +G  ++A+R +++M+D  + P    +++L+
Sbjct: 395 LVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 130/475 (27%), Positives = 228/475 (48%), Gaps = 15/475 (3%)

Query: 103 KPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVL 162
           +P+ A+ F + + +  GV+ D   + ++++ L ++G             C     + D +
Sbjct: 284 QPKEAIGFLKKMHSD-GVEPDVVTYNSLMDYLCKNGR------------CTEARKMFDSM 330

Query: 163 IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG 222
              GL     I     LL  Y  K  + +   + + M+RNG+ P+    + +I      G
Sbjct: 331 TKRGLKP--EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 223 FSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYN 282
              +A  V+  M + G+ P  VTY T++   CK G +++A+    +M     SP  + YN
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
            LI       + ++A+ LI +ML  G+ +    +N II  + ++G ++E+  L + MV  
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           GV P + TY+ LI G C  G++ +A      M+   + PD ++YNTL+ GYC+   + +A
Sbjct: 509 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
            +LF E+ S  + P ++TYN ++ GL +      A++L   +   G   ++ TY I+++G
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHG 628

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            CK      A   F  +    LQ +   +   I   LK+G   EA  L   + A G  PD
Sbjct: 629 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
           + TY+++   L + G LEE ++L   M  +G   +     SI+   L+ GD+ R 
Sbjct: 689 VRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743


>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  275 bits (703), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 153/483 (31%), Positives = 258/483 (53%), Gaps = 1/483 (0%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A +++  + E G+ P +V ++ +++   K G+M++A EL   M+  G  PN    N L+ 
Sbjct: 344 ALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLE 403

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           GF     LE A GL  + ++ G+  +  +YN ++    E G + EA NL E+MV++G+ P
Sbjct: 404 GFHEQNLLEHAYGLFDEAVEHGI-TNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITP 462

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
           +L +YN LI G CK G +  A      +L + + P+ ++Y  L+ G+ + G+   AF++F
Sbjct: 463 SLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVF 522

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
           +++ + N+ PT  T+NT+I+GL + G +   Q    N I QG +   ITY  +++G  K 
Sbjct: 523 EQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKE 582

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G +  A   + EM   G+ PD   YT+ I G  K      A  +  +M  KG   D++ Y
Sbjct: 583 GAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAY 642

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           + L+ G CK+  +E A++   +++  G  P+ + Y S+I   + + ++    +L   M++
Sbjct: 643 SALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIK 702

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
             +   L  YT +I      G+L LA   +SEM  K I P+++ Y  LINGL    +++ 
Sbjct: 703 NKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLEN 762

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
           A  +  +M+   I P+   Y ILI  N   GN QEA RL+ EMLD+ + PD  T+  L+ 
Sbjct: 763 ASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVN 822

Query: 707 KQL 709
            +L
Sbjct: 823 GKL 825



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 183/716 (25%), Positives = 333/716 (46%), Gaps = 60/716 (8%)

Query: 43  SNNKDSVLNPESESYYKELIISTVEEKPWA------FCNNRWVSDHFQAVVSDPELLVRV 96
           S+N  S+       +  ++  +T +  P        F     +S   Q        LV +
Sbjct: 8   SDNLTSIPQKNIRPFLSQIFFTTQQHFPEKIPSTPNFPEKIIISPESQPSEKKNRFLVTL 67

Query: 97  LNRIREKPRIALRFFRWVETQPG-VKRDEFV------------FCTILEILIESGLLRSA 143
           L+  +  P+ AL+FF  VE + G VK  +F+             C+ L+ L+ + +   A
Sbjct: 68  LSH-KSNPKSALKFFHQVERKRGFVKTVDFISLLIHILSSNSKTCSSLQFLLNNYVFGDA 126

Query: 144 YWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNG 203
               +  V      +L+     G  S    ++ + LL  + + + +   +  F  ML + 
Sbjct: 127 TPSAKVFV----ECLLECSGRYGFES--DSRVFNYLLKSFVRVNKITDAVECFRTMLEHD 180

Query: 204 LLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEAL 263
           L+P V   N ++  +        AR++Y  M E GI     T + ++ +  KEG+ +E  
Sbjct: 181 LVPWVPIMNNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVE 240

Query: 264 ELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGY 323
           +   E +GRG   +   Y++L+    R  +L  A  L+++M + G   S  +Y  +I   
Sbjct: 241 KFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVAC 300

Query: 324 SEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
            ++G  VEAL L++EMV+ G+   +     L+ G C  G V+ A   F E++   V+PD+
Sbjct: 301 VKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDV 360

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP--------------------------- 416
           + ++ L+ G  + G++ +A+ L+  ++   + P                           
Sbjct: 361 VIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDE 420

Query: 417 -------TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
                   VVTYN L+  L   G +  A  L E M+++GI P +++Y  ++ G CK G +
Sbjct: 421 AVEHGITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCM 480

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A      +L +GL+P+   YT  I G  K GD+  A+ + E+M+A    P   T+N +
Sbjct: 481 DKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTV 540

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           ++GL K G + E  + L   +  GF+   ITY SII    + G +      +  M   G+
Sbjct: 541 INGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGI 600

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
           SP ++TYT LI       ++ LA    S+M+ KG++ +V+ Y+ALI+G C++  ++ A  
Sbjct: 601 SPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASK 660

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            F ++ + G+ PN   Y  +I+   +  N + AL L++EM+  ++  D   +++++
Sbjct: 661 FFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSII 716



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 158/483 (32%), Positives = 259/483 (53%), Gaps = 1/483 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V   L +F++++  G++PDV   + +I      G   KA E+Y  M   GI+P++   N+
Sbjct: 341 VNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNS 400

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +L+ F ++  ++ A  L  E    G + N VTYN+L+      G++ +A  L   M+  G
Sbjct: 401 LLEGFHEQNLLEHAYGLFDEAVEHGIT-NVVTYNILLKWLGELGKVNEACNLWEKMVSKG 459

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           +  S  SYN +I G+ +KG + +A ++ + ++ RG+ P   TY +LI G  K G    A 
Sbjct: 460 ITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAF 519

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F +M+  N+ P   ++NT++ G  ++G + E     +    +  V T +TYN++IDG 
Sbjct: 520 VVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGF 579

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
            + G ++ A      M   GI PDVITYT +++G CK   + +A E  ++M  KG++ D 
Sbjct: 580 FKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDV 639

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
            AY+  I G  K+ D   A +   E+L  G  P+ + YN ++ G   L ++E A  L ++
Sbjct: 640 VAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQE 699

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M+ +    D   YTSII   L+ G L    DL++ ML K + P +V YTVLI+  +  G+
Sbjct: 700 MIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQ 759

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           LE A     EM    I P+V+ YN LI G  R   + +A+ L  +M ++G++P+  TY I
Sbjct: 760 LENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDI 819

Query: 669 LIN 671
           L+N
Sbjct: 820 LVN 822



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 144/480 (30%), Positives = 261/480 (54%), Gaps = 3/480 (0%)

Query: 158 ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
           + D ++ GG+     + I  +L+   +K   +E+   ++ +M   G+ P+V   N +++ 
Sbjct: 347 LFDEVVEGGVVP--DVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEG 404

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
             +      A  ++    E GI  ++VTYN +L    + G++ EA  L  +M  +G +P+
Sbjct: 405 FHEQNLLEHAYGLFDEAVEHGIT-NVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPS 463

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
            V+YN LI G  + G +++A  +++ +L+ GLK +A +Y  +I G+ +KG    A  + E
Sbjct: 464 LVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFE 523

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
           +M+   +APT  T+N +I GL K GRVS+ + +    +++  +   I+YN+++ G+ + G
Sbjct: 524 QMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEG 583

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
            +  A L + E+    + P V+TY +LIDGLC+   + +A ++  +M  +G+  DV+ Y+
Sbjct: 584 AVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYS 643

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
            +++G CKM ++  A +FF E+L  GL P+   Y + I+G + L +   A  L +EM+  
Sbjct: 644 ALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKN 703

Query: 518 GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
             P DL  Y  ++ GL K G L  A +L  +M+    +PD + YT +I+     G L   
Sbjct: 704 KVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENA 763

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
             +   M    ++P+++ Y +LI  +   G L+ AF    EM  KG+ P+  TY+ L+NG
Sbjct: 764 SKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 823



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 131/453 (28%), Positives = 229/453 (50%), Gaps = 15/453 (3%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G++ + F+  ++LE   E  LL  AY            G+ D  +  G+++ V+  IL  
Sbjct: 390 GIQPNVFIVNSLLEGFHEQNLLEHAY------------GLFDEAVEHGITNVVTYNIL-- 435

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
            L    +   V +   ++ KM+  G+ P + + N +I      G   KA  + + + E G
Sbjct: 436 -LKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERG 494

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           +KP+ VTY  ++D F K+G+ + A  +  +M     +P   T+N +I G  + G + + +
Sbjct: 495 LKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQ 554

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
             + + +K G   ++ +YN II G+ ++G +  AL    EM   G++P + TY  LI GL
Sbjct: 555 DKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGL 614

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           CK  ++  A     +M  K +  D+++Y+ L+ G+C+  ++  A   F EL    L P  
Sbjct: 615 CKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNT 674

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           V YN++I G     ++E A  L + MI   +  D+  YT ++ G  K G LS+A + ++E
Sbjct: 675 VVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSE 734

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           ML K + PD   YT  I G    G    A ++ +EM      P ++ YN+L+ G  + G+
Sbjct: 735 MLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGN 794

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
           L+EA  L  +M+  G +PD  TY  +++  L++
Sbjct: 795 LQEAFRLHDEMLDKGLVPDDTTYDILVNGKLKV 827



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 92/273 (33%), Positives = 148/273 (54%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
            N  ++ G +      N II      G    A   YR M E GI P ++TY +++D  CK
Sbjct: 557 LNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCK 616

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
             ++  ALE+  +M+ +G   + V Y+ LI GF +  ++E A     ++L +GL  +   
Sbjct: 617 SNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVV 676

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           YN +I G+     +  ALNL +EM+   V   L  Y  +I GL K G++S A   + EML
Sbjct: 677 YNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEML 736

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
            K+++PDI+ Y  L+ G   +G +  A  +  E+   N+ P+V+ YN LI G  R G+L+
Sbjct: 737 SKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQ 796

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
            A +L + M+++G++PD  TY I+VNG  K+ +
Sbjct: 797 EAFRLHDEMLDKGLVPDDTTYDILVNGKLKVSH 829



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/327 (29%), Positives = 164/327 (50%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           LL+  + KK   E+  +VF +M+   + P     N +I  L   G   + ++      + 
Sbjct: 504 LLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQ 563

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G   + +TYN+++D F KEG +  AL    EM   G SP+ +TY  LI G  ++ ++  A
Sbjct: 564 GFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLA 623

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             +  DM   G+K+   +Y+ +I G+ +   +  A     E++  G+ P    YN +I G
Sbjct: 624 LEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISG 683

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
                 +  A +   EM++  V  D+  Y +++ G  + G +  A  L+ E+ S+++VP 
Sbjct: 684 FIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPD 743

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           +V Y  LI+GL   G LE A ++ + M    I P V+ Y I++ G+ + GNL  A    +
Sbjct: 744 IVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHD 803

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDT 504
           EML KGL PD   Y   + G+LK+  T
Sbjct: 804 EMLDKGLVPDDTTYDILVNGKLKVSHT 830



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 165/339 (48%), Gaps = 1/339 (0%)

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           +N LL  + R   I +A   F  +   +LVP V   N L+  + R   +  A+QL + M+
Sbjct: 153 FNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLYDEMV 212

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
            +GI  D  T  +++    K G      +FF E   +GL+ D  AY+  +    +  D +
Sbjct: 213 ERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLN 272

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
            A  L +EM   G+ P   TY  ++    K G+  EA  L  +MV  G   + I   S++
Sbjct: 273 LACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLM 332

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
                +GD+     LF+ ++  G+ P +V ++VLI+  +  G +E A+  ++ M++ GI+
Sbjct: 333 KGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQ 392

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           PNV   N+L+ G      ++ AYGLF +  E GI  N  TY IL+      G   EA  L
Sbjct: 393 PNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGI-TNVVTYNILLKWLGELGKVNEACNL 451

Query: 686 YKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           +++M+ + I P   +++ L+L    K     A   L+S+
Sbjct: 452 WEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSI 490



 Score = 40.0 bits (92), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 33/166 (19%), Positives = 70/166 (42%)

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
           GF  D   +  ++ + + +  +    + F  ML   L P +     L+ A   R  +  A
Sbjct: 145 GFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDA 204

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
              + EM  +GI  +  T + ++    +  + ++    F + +  G+  +   Y+IL+  
Sbjct: 205 RQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQA 264

Query: 673 NCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAV 718
            C   +   A  L KEM +    P   T++A+++  + +   V A+
Sbjct: 265 VCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEAL 310


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  275 bits (702), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 151/510 (29%), Positives = 264/510 (51%), Gaps = 5/510 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y +   +   +  F +M      P     N I+  L D  +  +A +VY  M   G+ P 
Sbjct: 60  YARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPD 119

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           + T+   L SFC       AL LL  +  RG     V Y  ++ G   +G    AR L  
Sbjct: 120 LHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFD 175

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            ML   +  +  ++N ++    ++G ++EA  L  +++ RG++  L TYNI I GLC+ G
Sbjct: 176 QMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAG 235

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R+ +A  R  + +R   +PD+++YNTL+ G C+     EA      + ++  +P   TYN
Sbjct: 236 RLPEAV-RLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYN 294

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           T+IDG C+   ++ A +L ++ + +G +PD +TY  ++NG C  G++  A E FNE   K
Sbjct: 295 TIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAK 354

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G++PD   Y + + G    G    A ++  EM  +G  PD+ TYN++++GLCK+G++ +A
Sbjct: 355 GIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDA 414

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             ++   +  G++PD  T+ ++I    +   L     L   M   G++P  +TY  +++ 
Sbjct: 415 TVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNG 474

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
               G++      F EM +KG  PN ITYN LI   CR  ++++A  + + M +EG+ P+
Sbjct: 475 LCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPD 534

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDR 692
             ++  LI   C  G+ + A  L++++ ++
Sbjct: 535 AVSFNTLIYGFCRNGDLEGAYLLFQKLEEK 564



 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 153/477 (32%), Positives = 251/477 (52%), Gaps = 1/477 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F++ML   + P++   N+++  L   G  ++A  +   + + G+  ++ TYN  +   C
Sbjct: 173 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLC 232

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           + G + EA+ L+  M+     P+ VTYN LI G  +    ++A   +R M+  G      
Sbjct: 233 EAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF 291

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +YN II GY +  ++ EA  L ++ V +G  P   TY  LI GLC  G V  A   F E 
Sbjct: 292 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 351

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
             K + PDI+ YN+L+ G C  G I  A  + +E+      P + TYN +I+GLC+ G++
Sbjct: 352 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 411

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
             A  +  + I +G LPDV T+  +++G CK   L  A +    M   G+ PD   Y + 
Sbjct: 412 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 471

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           + G  K G  +E     +EM+ KG  P+ ITYN+L+   C+   +EEA++++ KM  +G 
Sbjct: 472 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 531

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            PD +++ ++I+     GDL     LF  +  KG S T  T+  LI A + +  + +A  
Sbjct: 532 HPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEK 591

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
            F EM  KG R +  TY  LI+G C+   +D+AY   ++M ++G +P+  T+  +IN
Sbjct: 592 IFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVIN 648



 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 156/480 (32%), Positives = 245/480 (51%), Gaps = 1/480 (0%)

Query: 221 NGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVT 280
           +G +  AR+++  M    + P++  +N +L + CK G++ EA  LL ++  RG S N  T
Sbjct: 164 HGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFT 223

Query: 281 YNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV 340
           YN+ I G    G L +A  L+  M    +     +YN +I G  +K +  EA++    M+
Sbjct: 224 YNIWIRGLCEAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRMM 282

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
            +G  P   TYN +I G CK   V +A     + + K  +PD ++Y +L+ G C  G++ 
Sbjct: 283 NQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVE 342

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
            A  LF+E +++ + P +V YN+L+ GLC  G +  A Q+   M  +G  PD+ TY I++
Sbjct: 343 RALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVI 402

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
           NG CKMGN+S A    N+ + KG  PD F + T I G  K      A +L E M   G  
Sbjct: 403 NGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIA 462

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           PD ITYN +++GLCK G + E NE  ++M+  G  P+ ITY  +I        +     +
Sbjct: 463 PDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKV 522

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
              M ++GL P  V++  LI+     G LE A++ F +++ KG      T+N LI     
Sbjct: 523 IVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSG 582

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
              +  A  +F +M  +G   + YTY +LI+ +C   N   A     EM+ +   P   T
Sbjct: 583 KLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMST 642



 Score =  261 bits (668), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 165/559 (29%), Positives = 275/559 (49%), Gaps = 20/559 (3%)

Query: 103 KPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVL 162
           +P IALR  R +       R    +CT++  L   G    A  + + ++  ++       
Sbjct: 135 RPHIALRLLRALP-----HRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFP----- 184

Query: 163 IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG 222
                    ++   + +L    K+  V +  L+  K+++ G+  ++   N  I+ L + G
Sbjct: 185 ---------NLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAG 235

Query: 223 FSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYN 282
              +A  +   M  + + P +VTYNT++   CK+   QEA+  L  M  +GC P+  TYN
Sbjct: 236 RLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYN 294

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
            +I G+ +   +++A  L++D +  G      +Y  +I G   +G +  AL L  E   +
Sbjct: 295 TIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAK 354

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           G+ P +  YN L+ GLC  G +  A     EM  +   PDI +YN ++ G C+ GNI +A
Sbjct: 355 GIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDA 414

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
            ++ ++   +  +P V T+NTLIDG C+   L+ A QL E M   GI PD ITY  ++NG
Sbjct: 415 TVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNG 474

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            CK G ++   E F EM+ KG  P+   Y   I    +     EA ++  +M  +G  PD
Sbjct: 475 LCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPD 534

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
            +++N L++G C+ G LE A  L +K+   G+     T+ ++I A     ++     +F+
Sbjct: 535 AVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFD 594

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
            ML KG      TY VLI        ++ A+M+  EM  KG  P++ T+  +IN L    
Sbjct: 595 EMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNH 654

Query: 643 RIDQAYGLFIDMEEEGILP 661
           R+ QA G+   M + G++P
Sbjct: 655 RVFQAVGIIHIMVKIGVVP 673



 Score =  245 bits (625), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 144/491 (29%), Positives = 237/491 (48%), Gaps = 32/491 (6%)

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           Y   + ++ + G +++A++    M    C P    YN ++         +QA  +   ML
Sbjct: 53  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 112

Query: 306 KLGLKVSAHS-------------------------------YNPIICGYSEKGLLVEALN 334
             G+    H+                               Y  ++CG    G   +A  
Sbjct: 113 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQ 172

Query: 335 LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
           L ++M+   V P LA +N +++ LCK G V +A     +++++ +  ++ +YN  + G C
Sbjct: 173 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLC 232

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
            +G + EA  L D +R+   VP VVTYNTLI GLC+    + A      M+NQG LPD  
Sbjct: 233 EAGRLPEAVRLVDGMRAY-AVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF 291

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
           TY  +++G CK+  +  A E   + + KG  PD+  Y + I G    GD   A  L  E 
Sbjct: 292 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 351

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
            AKG  PD++ YN LV GLC  G +  A +++ +M  +G  PD  TY  +I+   +MG++
Sbjct: 352 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 411

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
                + N+ + KG  P + T+  LI  +  R +L+ A      M   GI P+ ITYN++
Sbjct: 412 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 471

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           +NGLC+  ++++    F +M  +G  PN  TY ILI   C +   +EA ++  +M    +
Sbjct: 472 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 531

Query: 695 EPDYCTHSALL 705
            PD  + + L+
Sbjct: 532 HPDAVSFNTLI 542



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 131/417 (31%), Positives = 215/417 (51%), Gaps = 5/417 (1%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K SMV++   +    +  G +PD      +I  L   G   +A E++      GIKP 
Sbjct: 300 YCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPD 359

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           IV YN+++   C +G +  AL+++ EM   GC P+  TYN++I G  + G +  A  ++ 
Sbjct: 360 IVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMN 419

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           D +  G      ++N +I GY ++  L  AL L E M   G+AP   TYN ++ GLCK G
Sbjct: 420 DAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAG 479

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           +V++    F EM+ K   P+ I+YN L+  +CRS  + EA  +  ++    L P  V++N
Sbjct: 480 KVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFN 539

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           TLI G CR GDLE A  L + +  +G      T+  ++       N+ MA + F+EML K
Sbjct: 540 TLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSK 599

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G + D + Y   I G  K  +   AY    EM+ KGF P + T+  +++ L     + +A
Sbjct: 600 GHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQA 659

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
             ++  MV  G +P+ +   +I++A  +  ++   + L  ++++KG   +  TY VL
Sbjct: 660 VGIIHIMVKIGVVPEVV--DTILNA--DKKEIAAPKILVEDLMKKG-HISYPTYEVL 711



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 171/381 (44%), Gaps = 8/381 (2%)

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS--YNTLLYGYCRSGNIGEAFL 404
           T+  Y  LI  L   GRV  A        R  + P  I   Y   +  Y R+G + +A  
Sbjct: 13  TVPAYCALIRPLASAGRVD-AVDAAVASARSRLSPATIHPLYVASIRAYARAGRLRDAVD 71

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
            F+ +      P    YN ++D L      + A ++   M+  G+ PD+ T+TI +   C
Sbjct: 72  AFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFC 131

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
                 +A      +  +G      AY T + G    G T +A +L ++ML     P+L 
Sbjct: 132 LTARPHIALRLLRALPHRGA----VAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLA 187

Query: 525 TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM 584
            +N ++H LCK G + EA  LL K++  G   +  TY   I    E G L     L + M
Sbjct: 188 AFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGM 247

Query: 585 LRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRI 644
            R    P +VTY  LI     +   + A  Y   M  +G  P+  TYN +I+G C++  +
Sbjct: 248 -RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMV 306

Query: 645 DQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
            +A  L  D   +G +P++ TY  LIN  C  G+ + AL L+ E   + I+PD   +++L
Sbjct: 307 QEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSL 366

Query: 705 LLKQLDKDYKVHAVEYLESLT 725
           +     +   +HA++ +  + 
Sbjct: 367 VKGLCLQGLILHALQVMNEMA 387


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  275 bits (702), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 176/614 (28%), Positives = 292/614 (47%), Gaps = 18/614 (2%)

Query: 90  PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVET 149
           P+ L+  L R  ++   ALR F W   QP       V+  IL  L ++G       V+E 
Sbjct: 64  PKQLIETLRRQTDEV-AALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEE 122

Query: 150 VVCVNMHGILDVLIGGGLSSCVSIKILDLLLL-IYTKKSMVEQCLLVFNKMLRN-GLLPD 207
           +                LS C   + + L+ +  Y K  + ++ + +   M     + PD
Sbjct: 123 M---------------KLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPD 167

Query: 208 VKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLW 267
            +  N ++ VL D          +  M    I+  + T+N ++ + CK  +++ A+ ++ 
Sbjct: 168 TRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMME 227

Query: 268 EMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKG 327
           EM   G SP+  T+  ++ G+   G L+ A  +   M++ G   +  + N +I G+ ++G
Sbjct: 228 EMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQG 287

Query: 328 LLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYN 387
            + +AL+  +E V+ G  P   TYN L+ GLCK G    A      ML   + PDI +YN
Sbjct: 288 RIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYN 347

Query: 388 TLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
           +L+ G C+ G I EA  + D++ SR+  P  VTYN +I  LC+   ++ A ++   + ++
Sbjct: 348 SLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSK 407

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
           GILPDV T+  ++ G C   N   A + F EM  KG +PD F Y   I          EA
Sbjct: 408 GILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEA 467

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
             L +EM   G   +++ YN L+ G CK   +EEA E+  +M   G   D +TY ++I  
Sbjct: 468 LNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDG 527

Query: 568 SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
             +   +     L + M+ +GL P   TY  L+      G ++ A      M   G  P+
Sbjct: 528 LCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPD 587

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYK 687
           ++TY  LI+GLC+  R+  A  L   ++ +G++   + Y  +I          EA+RL++
Sbjct: 588 IVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFR 647

Query: 688 EMLDREIEPDYCTH 701
           EMLD+   PD  T+
Sbjct: 648 EMLDKSEPPDAITY 661



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 155/504 (30%), Positives = 249/504 (49%), Gaps = 1/504 (0%)

Query: 173 IKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR 232
           +   ++L+    K   V   +L+  +M   GL PD      I++   + G    A  +  
Sbjct: 203 VSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKE 262

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
            M E+G   + VT N +++ FCK+G + +AL  + E    G  P+  TYN L+ G  + G
Sbjct: 263 QMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIG 322

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
             + A  ++  ML  GL    ++YN +I G  + G + EA+ + ++MV+R  +P   TYN
Sbjct: 323 HAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYN 382

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
            +I  LCK  RV +A      +  K ++PD+ ++N+L+ G C S N   A  LF+E++ +
Sbjct: 383 AIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGK 442

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
              P   TYN LID LC    LE A  L + M   G   +V+ Y  +++G CK   +  A
Sbjct: 443 GCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEA 502

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
            E F+EM  +G+  D   Y T I G  K     +A +L ++M+ +G  PD  TYN L+  
Sbjct: 503 EEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTH 562

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
            CK G +++A ++++ M   G  PD +TY ++I    + G ++    L  ++  KG+  T
Sbjct: 563 FCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLT 622

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR-LRRIDQAYGLF 651
              Y  +I A   R R   A   F EM  K   P+ ITY  +  GLC     I +A    
Sbjct: 623 PHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFT 682

Query: 652 IDMEEEGILPNKYTYTILINENCN 675
           ++M E G +P   ++ +L    C 
Sbjct: 683 VEMIERGNIPEFSSFVMLAEGLCT 706



 Score =  245 bits (625), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 148/503 (29%), Positives = 253/503 (50%), Gaps = 2/503 (0%)

Query: 205 LPDVKNCNRIIKVLRDNGFSVKAREVYRMMG-EFGIKPSIVTYNTMLDSFCKEGEMQEAL 263
           LP      ++I+ LR     V A  V+     +    PS   Y  +L    K G  +   
Sbjct: 58  LPPDFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMR 117

Query: 264 ELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML-KLGLKVSAHSYNPIICG 322
            +L EM+  GC  +   + + +  + +    ++  G+++ M  +  +K     YN ++  
Sbjct: 118 RVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNV 177

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
             +   L    +    MV R +   ++T+NILI  LCK  +V  A     EM    + PD
Sbjct: 178 LVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPD 237

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
             ++ T++ GY   GN+  A  + +++       T VT N LI+G C+ G ++ A    +
Sbjct: 238 ETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQ 297

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
             +++G  PD  TY  +VNG CK+G+   A E  + ML  GL PD + Y + I+G  KLG
Sbjct: 298 EAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLG 357

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
           +  EA ++ ++M+++   P+ +TYN ++  LCK   ++EA E+ R +   G +PD  T+ 
Sbjct: 358 EIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFN 417

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
           S+I       + +   DLF  M  KG  P   TY +LI +  +  +LE A     EM++ 
Sbjct: 418 SLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELN 477

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
           G   NV+ YN LI+G C+ +RI++A  +F +ME +G+  +  TY  LI+  C +   ++A
Sbjct: 478 GCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDA 537

Query: 683 LRLYKEMLDREIEPDYCTHSALL 705
            +L  +M+   + PD  T+++LL
Sbjct: 538 AQLMDQMIMEGLRPDKFTYNSLL 560



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 133/473 (28%), Positives = 219/473 (46%), Gaps = 35/473 (7%)

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
           M  E+ IKP    YN +L+      +++        M  R    +  T+N+LI    +  
Sbjct: 158 MEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAH 217

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
           ++  A  ++ +M   GL     ++  I+ GY E G L  AL ++E+MV  G   T  T N
Sbjct: 218 QVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVN 277

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
           +LI G                                   +C+ G I +A     E  S 
Sbjct: 278 VLING-----------------------------------FCKQGRIDQALSFIQEAVSE 302

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
              P   TYNTL++GLC+ G  + A ++ + M+  G+ PD+ TY  +++G CK+G +  A
Sbjct: 303 GFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEA 362

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
            +  ++M+ +   P+   Y   I+   K     EA  +   + +KG  PD+ T+N L+ G
Sbjct: 363 VKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQG 422

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           LC   + + A +L  +M G G  PD  TY  +I +      L    +L   M   G +  
Sbjct: 423 LCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARN 482

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
           +V Y  LI       R+E A   F EM+++G+  + +TYN LI+GLC+ +R++ A  L  
Sbjct: 483 VVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMD 542

Query: 653 DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            M  EG+ P+K+TY  L+   C  G+ ++A  + + M      PD  T++ L+
Sbjct: 543 QMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLI 595



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 137/278 (49%), Gaps = 17/278 (6%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCV-SIKILD 177
           G + DEF +  +++ L  S  L  A               L++L    L+ C  ++ I +
Sbjct: 443 GCRPDEFTYNMLIDSLCSSRKLEEA---------------LNLLKEMELNGCARNVVIYN 487

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
            L+  + K   +E+   +F++M   G+  D    N +I  L  +     A ++   M   
Sbjct: 488 TLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIME 547

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G++P   TYN++L  FCK G++++A +++  M   GC+P+ VTY  LI+G  + G ++ A
Sbjct: 548 GLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVA 607

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L+R +   G+ ++ H+YNP+I    ++    EA+ L  EM+ +   P   TY I+  G
Sbjct: 608 SRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRG 667

Query: 358 LCK-WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
           LC   G + +A     EM+ +  IP+  S+  L  G C
Sbjct: 668 LCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLC 705



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/292 (21%), Positives = 120/292 (41%), Gaps = 19/292 (6%)

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
           +QL E +  Q    D +    + N + K  N   +   + E+LRK  +   F Y  ++  
Sbjct: 65  KQLIETLRRQ---TDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLE 121

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI-P 556
           E+KL                G   D   + + V    K    +E   +++ M  +  I P
Sbjct: 122 EMKLS---------------GCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKP 166

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
           D   Y  +++  ++   L+      ++M+R+ +   + T+ +LI A     ++  A +  
Sbjct: 167 DTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMM 226

Query: 617 SEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNA 676
            EM   G+ P+  T+  ++ G      +D A  +   M E G      T  +LIN  C  
Sbjct: 227 EEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQ 286

Query: 677 GNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLGA 728
           G   +AL   +E +     PD  T++ L+       +  HA+E ++++ LG 
Sbjct: 287 GRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGG 338


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  275 bits (702), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 157/499 (31%), Positives = 257/499 (51%), Gaps = 2/499 (0%)

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM--QGRGCSPNGVTYNVLITG 287
           V R M + G  P++ +YN +L   C E   QEALELL  M   G  C P+ V+Y  +I G
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208

Query: 288 FSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPT 347
           F + G+L++A G   +ML  G+  +  +Y+ II    +   + +A+ +   MV  GV P 
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268

Query: 348 LATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFD 407
             TYN +++G C  G+  +A     +M    V PD+++YN+L+   C++G   EA  +FD
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328

Query: 408 ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG 467
            +  R L P + TY TL+ G    G L     L + M+  GI P+   ++I++    K G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
            +  A   F++M ++GL PD   Y T I    K G   +A R  E+M+ +   P  I YN
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
            L+H LC     ++A EL+ +M+  G   D I + SII +  + G +     LF+ M+R 
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
           G+ P ++TY+ LI  +   G+++ A    + M   G++P+ +TYN LING C++ R++ A
Sbjct: 509 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568

Query: 648 YGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLK 707
             LF +ME  G+ P+  TY I++           A  LY  + +   + +  T++ +L  
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHG 628

Query: 708 QLDKDYKVHAVEYLESLTL 726
               +    A+   ++L L
Sbjct: 629 LCKNNLTDEALRMFQNLCL 647



 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 149/487 (30%), Positives = 256/487 (52%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K+  +++    +++ML  G+LP+V   + II  L       KA EV   M + G+ P+
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             TYN+++  +C  G+ +EA+  L +M   G  P+ VTYN L+    +NG   +AR +  
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M K GLK    +Y  ++ GY+ KG LVE   L + MV  G+ P    ++ILI    K G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           +V  A   F +M ++ + PD ++Y T++   C+SG + +A   F+++    L P  + YN
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           +LI  LC +   + A++L   M+++GI  D I +  +++  CK G +  + + F+ M+R 
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G++PD   Y+T I G    G   EA +L   M++ G  PD +TYN L++G CK+  +E+A
Sbjct: 509 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             L R+M   G  PD ITY  I+    +       ++L+  +   G    L TY +++H 
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHG 628

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
                  + A   F  + +  ++    T+N +I  L ++ R D+A  LF  +   G++P+
Sbjct: 629 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688

Query: 663 KYTYTIL 669
             TY+++
Sbjct: 689 VRTYSLM 695



 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 158/498 (31%), Positives = 259/498 (52%), Gaps = 2/498 (0%)

Query: 194 LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG--IKPSIVTYNTMLD 251
           +V  +M + G +P+V + N ++K L D   S +A E+ +MM + G    P +V+Y T+++
Sbjct: 148 IVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVIN 207

Query: 252 SFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKV 311
            F KEG++ +A     EM  RG  PN VTY+ +I    +   +++A  ++  M+K G+  
Sbjct: 208 GFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMP 267

Query: 312 SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRF 371
           +  +YN I+ GY   G   EA+   ++M + GV P + TYN L+  LCK GR ++AR  F
Sbjct: 268 NCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMF 327

Query: 372 FEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY 431
             M ++ + P+I +Y TLL GY   G + E   L D +    + P    ++ LI    + 
Sbjct: 328 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQ 387

Query: 432 GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAY 491
           G ++ A  +   M  QG+ PD +TY  ++   CK G +  A  +F +M+ + L P    Y
Sbjct: 388 GKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVY 447

Query: 492 TTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
            + I          +A  L  EML +G   D I +N ++   CK G + E+ +L   MV 
Sbjct: 448 NSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVR 507

Query: 552 DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLEL 611
            G  PD ITY+++I      G +     L  +M+  G+ P  VTY  LI+ +    R+E 
Sbjct: 508 IGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMED 567

Query: 612 AFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
           A + F EM+  G+ P++ITYN ++ GL + RR   A  L++ + E G      TY I+++
Sbjct: 568 ALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILH 627

Query: 672 ENCNAGNWQEALRLYKEM 689
             C      EALR+++ +
Sbjct: 628 GLCKNNLTDEALRMFQNL 645



 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 152/553 (27%), Positives = 266/553 (48%), Gaps = 44/553 (7%)

Query: 195 VFNKMLRNGLLPDVKNCN-RIIKVLRDNGFSVKAREVYRMMGEFG---IKPSIVTYNTML 250
           VF+++LR G    +   N  +  V R +  +  +R  Y  M   G   + P++ TY  ++
Sbjct: 41  VFDELLRRGRGASIYGLNCALADVARHSPAAAVSR--YNRMARAGADEVTPNLCTYGILI 98

Query: 251 DSFCKEGEM-----------------------------------QEALEL-LWEMQGRGC 274
            S C  G +                                    +A+++ L  M   GC
Sbjct: 99  GSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGC 158

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH--SYNPIICGYSEKGLLVEA 332
            PN  +YN+L+ G       ++A  L++ M   G        SY  +I G+ ++G L +A
Sbjct: 159 IPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKA 218

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
                EM+ RG+ P + TY+ +I  LCK   +  A      M++  V+P+  +YN++++G
Sbjct: 219 YGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHG 278

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
           YC SG   EA     ++ S  + P VVTYN+L+D LC+ G    A+++ ++M  +G+ P+
Sbjct: 279 YCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE 338

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
           + TY  ++ G    G L       + M+R G+ P+ + ++  I    K G   +A  +  
Sbjct: 339 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFS 398

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           +M  +G  PD +TY  ++  LCK G +E+A     +M+ +   P +I Y S+IH+     
Sbjct: 399 KMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFD 458

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
              + ++L   ML +G+    + +  +I +H   GR+  +   F  M   G++P++ITY+
Sbjct: 459 KWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYS 518

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
            LI+G C   ++D+A  L   M   G+ P+  TY  LIN  C     ++AL L++EM   
Sbjct: 519 TLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESS 578

Query: 693 EIEPDYCTHSALL 705
            + PD  T++ +L
Sbjct: 579 GVSPDIITYNIIL 591



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 140/498 (28%), Positives = 250/498 (50%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   +++ + V   M++NG++P+ +  N I+     +G   +A    + M   G++P +V
Sbjct: 246 KAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVV 305

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TYN+++D  CK G   EA ++   M  RG  P   TY  L+ G++  G L +  GL+  M
Sbjct: 306 TYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 365

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           ++ G+  + + ++ +IC Y+++G + +A+ +  +M  +G+ P   TY  +I  LCK GRV
Sbjct: 366 VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRV 425

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            DA   F +M+ + + P  I YN+L++  C      +A  L  E+  R +    + +N++
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSI 485

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           ID  C+ G +  +++L + M+  G+ PD+ITY+ +++G C  G +  A +    M+  G+
Sbjct: 486 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGM 545

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
           +PD   Y T I G  K+    +A  L  EM + G  PD+ITYN+++ GL +      A E
Sbjct: 546 KPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKE 605

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           L   +   G   +  TY  I+H   +         +F N+    L     T+ ++I A  
Sbjct: 606 LYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 665

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
             GR + A   F+ +   G+ P+V TY+ +   L     +++   LF+ MEE G   N  
Sbjct: 666 KVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSR 725

Query: 665 TYTILINENCNAGNWQEA 682
               ++ +    G+   A
Sbjct: 726 MLNSIVRKLLQRGDITRA 743



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/417 (29%), Positives = 205/417 (49%), Gaps = 7/417 (1%)

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG---VAPTLATY 351
           E AR +  ++L+ G   S +  N  +   +       A++    M   G   V P L TY
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSP-AAAVSRYNRMARAGADEVTPNLCTY 94

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF-LLFDELR 410
            ILI   C  GR+         +++K    D I++  LL G C      +A  ++   + 
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG--ILPDVITYTIMVNGSCKMGN 468
               +P V +YN L+ GLC     + A +L + M + G    PDV++YT ++NG  K G+
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
           L  A   ++EML +G+ P+   Y++ IA   K     +A  +   M+  G  P+  TYN 
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           +VHG C  G  +EA   L+KM  DG  PD +TY S++    + G     R +F++M ++G
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
           L P + TY  L+  +A +G L         M   GI PN   ++ LI    +  ++DQA 
Sbjct: 335 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            +F  M ++G+ P+  TY  +I   C +G  ++A+R +++M+D  + P    +++L+
Sbjct: 395 LVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 130/475 (27%), Positives = 228/475 (48%), Gaps = 15/475 (3%)

Query: 103 KPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVL 162
           +P+ A+ F + + +  GV+ D   + ++++ L ++G             C     + D +
Sbjct: 284 QPKEAIGFLKKMHSD-GVEPDVVTYNSLMDYLCKNGR------------CTEARKMFDSM 330

Query: 163 IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG 222
              GL     I     LL  Y  K  + +   + + M+RNG+ P+    + +I      G
Sbjct: 331 TKRGLKP--EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 223 FSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYN 282
              +A  V+  M + G+ P  VTY T++   CK G +++A+    +M     SP  + YN
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
            LI       + ++A+ LI +ML  G+ +    +N II  + ++G ++E+  L + MV  
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           GV P + TY+ LI G C  G++ +A      M+   + PD ++YNTL+ GYC+   + +A
Sbjct: 509 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
            +LF E+ S  + P ++TYN ++ GL +      A++L   +   G   ++ TY I+++G
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHG 628

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            CK      A   F  +    LQ +   +   I   LK+G   EA  L   + A G  PD
Sbjct: 629 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
           + TY+++   L + G LEE ++L   M  +G   +     SI+   L+ GD+ R 
Sbjct: 689 VRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  275 bits (702), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 169/575 (29%), Positives = 281/575 (48%), Gaps = 45/575 (7%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNG--LLPDVKNCNRIIKVLRDNGFSVKARE 229
           SIK   +L+        ++    VF +M R+G  + PDV     +IK L   G   +   
Sbjct: 174 SIKTCSILVEALGCGGQLDVARKVFGEM-RDGKTVAPDVHTYTAMIKALCRAG---EIDA 229

Query: 230 VYRMMGEF---GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
            + M+ E    GI+P++VTYN ++D+ CK G ++EA  L   M      P+ VT+ +LI+
Sbjct: 230 AFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILIS 289

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G +R  +  +   ++++M   G+  +   YN +I  +  KG   EAL L +EMV++G+  
Sbjct: 290 GLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQ 349

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR-SGNIGEAFLL 405
           T+ TYN++   LCK G +  A     EML   ++     +N+++  + R +G +     L
Sbjct: 350 TVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRL 409

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
             E+ +R L P        I  LC+ G  E A ++   ++ +G+  +V T   +++G C+
Sbjct: 410 IREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQ 469

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
             N+  A +    M+  G++ DR  Y   I G  K     EA +L+++M+ +GF PDL T
Sbjct: 470 GNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFT 529

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           +N+ +H  C LG +EE   LL +M  +G  PD +TY +II    +  D+ +  +    ++
Sbjct: 530 FNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELM 589

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL----------- 634
           + GL P  V Y  LI  +   G +  A      M+  GI+P  +TYN+L           
Sbjct: 590 KNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVE 649

Query: 635 ------------------------INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
                                   I G C++ +ID+A   F +M   GI PNK TYT L+
Sbjct: 650 EVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLM 709

Query: 671 NENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
                +GN +EA +L+ EM+   I PD  +++ L+
Sbjct: 710 FAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLI 744



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 149/531 (28%), Positives = 265/531 (49%), Gaps = 3/531 (0%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL-RDNGFSVKAREVYRMMG 235
           ++L+    K   VE+   +  +M+   + P +     +I  L R   F      +  M G
Sbjct: 250 NVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQG 309

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
            FGI P+ V YN M+   C++G   EAL+L  EM  +G     VTYN++     + GE+E
Sbjct: 310 -FGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEME 368

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGY-SEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
            A  ++ +ML  G+ V    +N ++  +    G L   L L  EM+ R + P  A     
Sbjct: 369 HAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTAC 428

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           I  LCK G+  +A   +F++L K +  ++ + N L++G C+  N+ EA  +   + +  +
Sbjct: 429 IQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGV 488

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
               +TYN +I G C+   ++ A QL+++MI +G  PD+ T+ I ++  C +G +     
Sbjct: 489 ELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILH 548

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
             ++M  +GL+PD   Y T I G  K  D  +A     E++  G  P+ + YN L+ G  
Sbjct: 549 LLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYG 608

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           + G++ +A  +L  M  +G  P  +TY S+++     G +   + +F   + K +   ++
Sbjct: 609 RNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVI 668

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
            YT++I      G+++ A MYF EM  +GI PN +TY  L+    +    ++A  LF +M
Sbjct: 669 GYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEM 728

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
              GI+P+  +Y  LI+  C   +  + +    EM  + ++ D C+++A +
Sbjct: 729 VSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFV 779



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 131/482 (27%), Positives = 252/482 (52%), Gaps = 2/482 (0%)

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQ-GRGCSPNGVTYNVL 284
           +A + +  +   G  PSI T + ++++    G++  A ++  EM+ G+  +P+  TY  +
Sbjct: 158 RAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAM 217

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           I    R GE++ A  ++ ++ + G++ +  +YN ++    + G + EA  L+  MV   V
Sbjct: 218 IKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRV 277

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
            P++ T+ ILI GL +  +  +      EM    + P+ + YN ++  +CR G+  EA  
Sbjct: 278 RPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALK 337

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
           LFDE+ S+ +  TVVTYN +   LC+ G++E A+++ + M+  G++     +  +V    
Sbjct: 338 LFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHL 397

Query: 465 K-MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
           +  G L +      EML + L+P+    T  I    K G   EA  +  ++L KG   ++
Sbjct: 398 RGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNV 457

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
            T N L+HGLC+  +++EA ++L+ MV  G   D ITY  +I    +   +     L ++
Sbjct: 458 ATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDD 517

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           M+++G  P L T+ + +H +   G++E       +M+ +G++P+++TY  +I+G C+ + 
Sbjct: 518 MIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKD 577

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSA 703
           + +A     ++ + G+ PN   Y  LI      GN  +A+ +   M    I+P   T+++
Sbjct: 578 MHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNS 637

Query: 704 LL 705
           L+
Sbjct: 638 LM 639



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 127/480 (26%), Positives = 224/480 (46%), Gaps = 36/480 (7%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V  +M   G+ P+    N +I      G   +A +++  M   GIK ++VTYN +  + C
Sbjct: 303 VLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALC 362

Query: 255 KEGEMQEALELL--------------------WEMQGRG----------------CSPNG 278
           KEGEM+ A ++L                    W ++G G                  PN 
Sbjct: 363 KEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPND 422

Query: 279 VTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
                 I    ++G+ E+A  +   +L  GL V+  + N +I G  +   + EA  + + 
Sbjct: 423 ALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKA 482

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
           MV  GV     TYNI+I G CK  ++ +A     +M+++   PD+ ++N  L+ YC  G 
Sbjct: 483 MVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGK 542

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           + E   L D+++S  L P +VTY T+IDG C+  D+  A +    ++  G+ P+ + Y  
Sbjct: 543 VEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNA 602

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           ++ G  + GN+S A    + M   G+QP    Y + +      G   E   +  + + K 
Sbjct: 603 LIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKD 662

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
               +I Y +++ G CK+G ++EA    ++M   G  P+ +TYT+++ A  + G+     
Sbjct: 663 IELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEAS 722

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
            LF+ M+  G+ P  V+Y  LI        L+      +EM  + ++ +  +YNA ++G+
Sbjct: 723 KLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFVDGI 782



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/434 (27%), Positives = 216/434 (49%), Gaps = 5/434 (1%)

Query: 145 WVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGL 204
           W      C     + D ++  G+    ++   +L+     K+  +E    + ++ML  G+
Sbjct: 325 WHCRKGHCSEALKLFDEMVSKGIKQ--TVVTYNLIAKALCKEGEMEHAEKILDEMLLAGM 382

Query: 205 LPDVKNCNRIIKV-LRDNG-FSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           +      N ++   LR  G   +  R +  M+  F +KP+       +   CK G+ +EA
Sbjct: 383 MVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARF-LKPNDALMTACIQELCKSGKHEEA 441

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
            E+ +++ G+G   N  T N LI G  +   +++A  +++ M+  G+++   +YN +I G
Sbjct: 442 AEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQG 501

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
             +   + EA+ L ++M+ RG  P L T+NI ++  C  G+V +  H   +M  + + PD
Sbjct: 502 CCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPD 561

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
           I++Y T++ GYC++ ++ +A     EL    L P  V YN LI G  R G++  A  + +
Sbjct: 562 IVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILD 621

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            M   GI P  +TY  ++   C  G +   +  F + + K ++     YT  I G  K+G
Sbjct: 622 TMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIG 681

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
              EA    +EM ++G PP+ +TY  L+    K G+ EEA++L  +MV  G +PD ++Y 
Sbjct: 682 KIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYN 741

Query: 563 SIIHASLEMGDLRR 576
           ++I    E+  L +
Sbjct: 742 TLISGFCEVDSLDK 755



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 122/229 (53%), Gaps = 3/229 (1%)

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV-GDGFIPDHIT 560
           G  S A     E+ A+G  P + T ++LV  L   G L+ A ++  +M  G    PD  T
Sbjct: 154 GSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHT 213

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           YT++I A    G++     +   + R G+ PT+VTY VL+ A    GR+E AF     M 
Sbjct: 214 YTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMV 273

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
              +RP+++T+  LI+GL R ++  +   +  +M+  GI PN+  Y  +I  +C  G+  
Sbjct: 274 EGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCS 333

Query: 681 EALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKV-HAVEYLESLTLGA 728
           EAL+L+ EM+ + I+    T++ L+ K L K+ ++ HA + L+ + L  
Sbjct: 334 EALKLFDEMVSKGIKQTVVTYN-LIAKALCKEGEMEHAEKILDEMLLAG 381



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 95/197 (48%), Gaps = 4/197 (2%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           I + L+  Y +   +   + + + M  NG+ P     N ++  +   G   + + V+   
Sbjct: 599 IYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQC 658

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
               I+  ++ Y  ++  FCK G++ EA+    EM  RG  PN +TY  L+  +S++G  
Sbjct: 659 IVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNK 718

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           E+A  L  +M+ LG+   + SYN +I G+ E   L + +    EM ++ +     +YN  
Sbjct: 719 EEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAF 778

Query: 355 IYGL----CKWGRVSDA 367
           + G+    C+   VS+A
Sbjct: 779 VDGITTPWCQKEAVSNA 795



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 54/107 (50%)

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
           ++ M   GI P+ +TY T++ ++ K G  +EA +L  EM   G  P+ V+YN LI+GF  
Sbjct: 690 FKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCE 749

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
              L++      +M    LK    SYN  + G +      EA++  E
Sbjct: 750 VDSLDKMVESPAEMSSQVLKQDGCSYNAFVDGITTPWCQKEAVSNAE 796


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  275 bits (702), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 187/604 (30%), Positives = 292/604 (48%), Gaps = 40/604 (6%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVV--CVN---MHGILDV 161
           AL+FF W+  +   K D   F ++L  L++  +L  A  V   ++  C N   +  + D 
Sbjct: 87  ALQFFYWISKRHFYKHDMGCFVSMLNRLVKDKILAPADHVRILMIKACRNEDELKRVTDF 146

Query: 162 LIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDN 221
           L G        I   D  L  +T        L  FN +L                 L   
Sbjct: 147 LHG--------ISSSDSGLFGFT--------LYSFNTLLLQ---------------LGKF 175

Query: 222 GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY 281
                A+ VY  +   G+KPS++T+NTM++  CK+G++QEA+ +  ++      P+  TY
Sbjct: 176 DMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTY 235

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
             LI G  RN +L++A  +   M+K G   ++ +Y+ +I G   +G + EA+++ EEM  
Sbjct: 236 TSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTE 295

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
           +G+ PT+ TY + I  LC  GRV DA +    M +K   P + +Y  ++ G  R+G +  
Sbjct: 296 KGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMEL 355

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           A  ++ ++    LVP  VTYN LI+ LC  G   +A ++ + M   G L +  TY  ++ 
Sbjct: 356 AIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIK 415

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
           G   M ++  A   FN+ML+ G  P    Y T I   LK G  + A R    M      P
Sbjct: 416 GLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEP 475

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           D  TY  L+ G CK G L+ A     +M+  G  P+  TYT++I    + G +     LF
Sbjct: 476 DERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLF 535

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
             M   G S ++ TY  +I   +   R   A  + ++M  +G++PN ITY +LINGLC+ 
Sbjct: 536 ERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKN 595

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
              + A+ +F +ME++  LPN +TYT LI   C  G    A RL     +   EP   T+
Sbjct: 596 TATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERL----TENGCEPTIDTY 651

Query: 702 SALL 705
           S L+
Sbjct: 652 STLV 655



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 172/628 (27%), Positives = 291/628 (46%), Gaps = 54/628 (8%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           GVK     F T++ IL + G ++ A  V   +   ++              C        
Sbjct: 192 GVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDL--------------CPDAFTYTS 237

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+L + +   +++   VF++M+++G  P+    + +I  L + G   +A ++   M E G
Sbjct: 238 LILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKG 297

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           I+P++ TY   + S C  G + +A+ L+  M  +GCSP+  TY  +I+G  R G++E A 
Sbjct: 298 IEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAI 357

Query: 299 GLIRDMLKLGLK-----------------------------------VSAHSYNPIICGY 323
           G+   MLK GL                                     +A +YN II G 
Sbjct: 358 GMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGL 417

Query: 324 SEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
                + +A+ +  +M+  G +PT+ TYN LI    K G +++A    + M   N  PD 
Sbjct: 418 FGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDE 477

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
            +Y  L+ G+C+ G +  A   F E+    + P   TY  +IDG C+ G ++VA  L E 
Sbjct: 478 RTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFER 537

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           M   G    + TY  +++G  K    S A +F  +M  +GLQP+   YT+ I G  K   
Sbjct: 538 MEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTA 597

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
           T+ A+++  EM  K   P+  TY  L++GLC+ G ++ A  L      +G  P   TY++
Sbjct: 598 TNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTE----NGCEPTIDTYST 653

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           ++      G       L  NM  KGLSP++  Y  L+ AH    +++ A   F+ M VKG
Sbjct: 654 LVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKG 713

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
            +P++  Y  LI  LC + R ++A  +F  + ++    +   +T+L++     G+    +
Sbjct: 714 FQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCM 773

Query: 684 RLYKEMLDREIEPDYCTHSALLLKQLDK 711
           +    M  R   P   T+  +L ++L K
Sbjct: 774 KFLYLMESRNCTPSLHTY-IILARELSK 800



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 134/404 (33%), Positives = 193/404 (47%), Gaps = 5/404 (1%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +E+ ++VFNKML++G  P V   N +I      G+   A     MM E   +P   TY  
Sbjct: 423 IEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCE 482

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++  FCK G++  A    +EM   G SPN  TY  +I G+ + G+++ A  L   M + G
Sbjct: 483 LISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENG 542

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
              S  +YN II G S+     EA     +M  +G+ P   TY  LI GLCK    + A 
Sbjct: 543 CSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAF 602

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F EM +KN +P+  +Y +L+YG C+ G +  A    + L      PT+ TY+TL+ GL
Sbjct: 603 KIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAA----ERLTENGCEPTIDTYSTLVSGL 658

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           CR G    A QL ENM  +G+ P +  Y  ++   CK   +  A E FN M  KG QP  
Sbjct: 659 CREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHL 718

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
           F Y   I     +    EA  + + +L K +  DLI + VLV GL + G  +   + L  
Sbjct: 719 FIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYL 778

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           M      P   TY  +     ++G    G D   N LR+   P+
Sbjct: 779 MESRNCTPSLHTYIILARELSKVGK-SIGTDQIGNRLREVSLPS 821



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 165/305 (54%)

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
           T+ ++NTL+  L ++  +  AQ +   + + G+ P ++T+  M+N  CK G +  A   F
Sbjct: 161 TLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVF 220

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           N++ +  L PD F YT+ I G  +     +A+ + + M+  G  P+ +TY+ L++GLC  
Sbjct: 221 NKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNE 280

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G + EA ++L +M   G  P   TYT  I +  ++G +    +L  +M +KG SP++ TY
Sbjct: 281 GRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTY 340

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
           T +I      G++ELA   + +M  +G+ PN +TYNALIN LC   R   A  +F  ME 
Sbjct: 341 TAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEG 400

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVH 716
            G L N  TY  +I       + ++A+ ++ +ML     P   T++ L+++ L + Y  +
Sbjct: 401 HGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNN 460

Query: 717 AVEYL 721
           A  +L
Sbjct: 461 ATRFL 465


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 151/510 (29%), Positives = 264/510 (51%), Gaps = 5/510 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y +   +   +  F +M      P     N I+  L D  +  +A +VY  M   G+ P 
Sbjct: 61  YARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPD 120

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           + T+   L SFC       AL LL  +  RG     V Y  ++ G   +G    AR L  
Sbjct: 121 LHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFD 176

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            ML   +  +  ++N ++    ++G ++EA  L  +++ RG++  L TYNI I GLC+ G
Sbjct: 177 QMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAG 236

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R+ +A  R  + +R   +PD+++YNTL+ G C+     EA      + ++  +P   TYN
Sbjct: 237 RLPEAV-RLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYN 295

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           T+IDG C+   ++ A +L ++ + +G +PD +TY  ++NG C  G++  A E FNE   K
Sbjct: 296 TIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAK 355

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G++PD   Y + + G    G    A ++  EM  +G  PD+ TYN++++GLCK+G++ +A
Sbjct: 356 GIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDA 415

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             ++   +  G++PD  T+ ++I    +   L     L   M   G++P  +TY  +++ 
Sbjct: 416 TVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNG 475

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
               G++      F EM +KG  PN ITYN LI   CR  ++++A  + + M +EG+ P+
Sbjct: 476 LCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPD 535

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDR 692
             ++  LI   C  G+ + A  L++++ ++
Sbjct: 536 AVSFNTLIYGFCRNGDLEGAYLLFQKLEEK 565



 Score =  273 bits (697), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 153/477 (32%), Positives = 251/477 (52%), Gaps = 1/477 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F++ML   + P++   N+++  L   G  ++A  +   + + G+  ++ TYN  +   C
Sbjct: 174 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLC 233

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           + G + EA+ L+  M+     P+ VTYN LI G  +    ++A   +R M+  G      
Sbjct: 234 EAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF 292

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +YN II GY +  ++ EA  L ++ V +G  P   TY  LI GLC  G V  A   F E 
Sbjct: 293 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 352

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
             K + PDI+ YN+L+ G C  G I  A  + +E+      P + TYN +I+GLC+ G++
Sbjct: 353 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 412

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
             A  +  + I +G LPDV T+  +++G CK   L  A +    M   G+ PD   Y + 
Sbjct: 413 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 472

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           + G  K G  +E     +EM+ KG  P+ ITYN+L+   C+   +EEA++++ KM  +G 
Sbjct: 473 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 532

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            PD +++ ++I+     GDL     LF  +  KG S T  T+  LI A + +  + +A  
Sbjct: 533 HPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEK 592

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
            F EM  KG R +  TY  LI+G C+   +D+AY   ++M ++G +P+  T+  +IN
Sbjct: 593 IFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVIN 649



 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 156/480 (32%), Positives = 245/480 (51%), Gaps = 1/480 (0%)

Query: 221 NGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVT 280
           +G +  AR+++  M    + P++  +N +L + CK G++ EA  LL ++  RG S N  T
Sbjct: 165 HGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFT 224

Query: 281 YNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV 340
           YN+ I G    G L +A  L+  M    +     +YN +I G  +K +  EA++    M+
Sbjct: 225 YNIWIRGLCEAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRMM 283

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
            +G  P   TYN +I G CK   V +A     + + K  +PD ++Y +L+ G C  G++ 
Sbjct: 284 NQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVE 343

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
            A  LF+E +++ + P +V YN+L+ GLC  G +  A Q+   M  +G  PD+ TY I++
Sbjct: 344 RALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVI 403

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
           NG CKMGN+S A    N+ + KG  PD F + T I G  K      A +L E M   G  
Sbjct: 404 NGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIA 463

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           PD ITYN +++GLCK G + E NE  ++M+  G  P+ ITY  +I        +     +
Sbjct: 464 PDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKV 523

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
              M ++GL P  V++  LI+     G LE A++ F +++ KG      T+N LI     
Sbjct: 524 IVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSG 583

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
              +  A  +F +M  +G   + YTY +LI+ +C   N   A     EM+ +   P   T
Sbjct: 584 KLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMST 643



 Score =  261 bits (668), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 165/559 (29%), Positives = 275/559 (49%), Gaps = 20/559 (3%)

Query: 103 KPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVL 162
           +P IALR  R +       R    +CT++  L   G    A  + + ++  ++       
Sbjct: 136 RPHIALRLLRALP-----HRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFP----- 185

Query: 163 IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG 222
                    ++   + +L    K+  V +  L+  K+++ G+  ++   N  I+ L + G
Sbjct: 186 ---------NLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAG 236

Query: 223 FSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYN 282
              +A  +   M  + + P +VTYNT++   CK+   QEA+  L  M  +GC P+  TYN
Sbjct: 237 RLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYN 295

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
            +I G+ +   +++A  L++D +  G      +Y  +I G   +G +  AL L  E   +
Sbjct: 296 TIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAK 355

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           G+ P +  YN L+ GLC  G +  A     EM  +   PDI +YN ++ G C+ GNI +A
Sbjct: 356 GIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDA 415

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
            ++ ++   +  +P V T+NTLIDG C+   L+ A QL E M   GI PD ITY  ++NG
Sbjct: 416 TVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNG 475

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            CK G ++   E F EM+ KG  P+   Y   I    +     EA ++  +M  +G  PD
Sbjct: 476 LCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPD 535

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
            +++N L++G C+ G LE A  L +K+   G+     T+ ++I A     ++     +F+
Sbjct: 536 AVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFD 595

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
            ML KG      TY VLI        ++ A+M+  EM  KG  P++ T+  +IN L    
Sbjct: 596 EMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNH 655

Query: 643 RIDQAYGLFIDMEEEGILP 661
           R+ QA G+   M + G++P
Sbjct: 656 RVFQAVGIIHIMVKIGVVP 674



 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 144/491 (29%), Positives = 237/491 (48%), Gaps = 32/491 (6%)

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           Y   + ++ + G +++A++    M    C P    YN ++         +QA  +   ML
Sbjct: 54  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 113

Query: 306 KLGLKVSAHS-------------------------------YNPIICGYSEKGLLVEALN 334
             G+    H+                               Y  ++CG    G   +A  
Sbjct: 114 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQ 173

Query: 335 LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
           L ++M+   V P LA +N +++ LCK G V +A     +++++ +  ++ +YN  + G C
Sbjct: 174 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLC 233

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
            +G + EA  L D +R+   VP VVTYNTLI GLC+    + A      M+NQG LPD  
Sbjct: 234 EAGRLPEAVRLVDGMRAY-AVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF 292

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
           TY  +++G CK+  +  A E   + + KG  PD+  Y + I G    GD   A  L  E 
Sbjct: 293 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 352

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
            AKG  PD++ YN LV GLC  G +  A +++ +M  +G  PD  TY  +I+   +MG++
Sbjct: 353 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 412

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
                + N+ + KG  P + T+  LI  +  R +L+ A      M   GI P+ ITYN++
Sbjct: 413 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 472

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           +NGLC+  ++++    F +M  +G  PN  TY ILI   C +   +EA ++  +M    +
Sbjct: 473 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 532

Query: 695 EPDYCTHSALL 705
            PD  + + L+
Sbjct: 533 HPDAVSFNTLI 543



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 131/417 (31%), Positives = 215/417 (51%), Gaps = 5/417 (1%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K SMV++   +    +  G +PD      +I  L   G   +A E++      GIKP 
Sbjct: 301 YCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPD 360

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           IV YN+++   C +G +  AL+++ EM   GC P+  TYN++I G  + G +  A  ++ 
Sbjct: 361 IVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMN 420

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           D +  G      ++N +I GY ++  L  AL L E M   G+AP   TYN ++ GLCK G
Sbjct: 421 DAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAG 480

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           +V++    F EM+ K   P+ I+YN L+  +CRS  + EA  +  ++    L P  V++N
Sbjct: 481 KVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFN 540

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           TLI G CR GDLE A  L + +  +G      T+  ++       N+ MA + F+EML K
Sbjct: 541 TLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSK 600

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G + D + Y   I G  K  +   AY    EM+ KGF P + T+  +++ L     + +A
Sbjct: 601 GHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQA 660

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
             ++  MV  G +P+ +   +I++A  +  ++   + L  ++++KG   +  TY VL
Sbjct: 661 VGIIHIMVKIGVVPEVV--DTILNA--DKKEIAAPKILVEDLMKKG-HISYPTYEVL 712



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 171/381 (44%), Gaps = 8/381 (2%)

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS--YNTLLYGYCRSGNIGEAFL 404
           T+  Y  LI  L   GRV  A        R  + P  I   Y   +  Y R+G + +A  
Sbjct: 14  TVPAYCALIRPLASAGRVD-AVDAAVASARSRLSPATIHPLYVASIRAYARAGRLRDAVD 72

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
            F+ +      P    YN ++D L      + A ++   M+  G+ PD+ T+TI +   C
Sbjct: 73  AFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFC 132

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
                 +A      +  +G      AY T + G    G T +A +L ++ML     P+L 
Sbjct: 133 LTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLA 188

Query: 525 TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM 584
            +N ++H LCK G + EA  LL K++  G   +  TY   I    E G L     L + M
Sbjct: 189 AFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGM 248

Query: 585 LRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRI 644
            R    P +VTY  LI     +   + A  Y   M  +G  P+  TYN +I+G C++  +
Sbjct: 249 -RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMV 307

Query: 645 DQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
            +A  L  D   +G +P++ TY  LIN  C  G+ + AL L+ E   + I+PD   +++L
Sbjct: 308 QEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSL 367

Query: 705 LLKQLDKDYKVHAVEYLESLT 725
           +     +   +HA++ +  + 
Sbjct: 368 VKGLCLQGLILHALQVMNEMA 388


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 172/547 (31%), Positives = 279/547 (51%), Gaps = 43/547 (7%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P  ++ N ++ VL           V+  M   GI P++ T+  ++ + C   E+  A  L
Sbjct: 198 PTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACAL 257

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           L +M   GC PN + Y  LI   S+ G + +   L+ +ML +G     +++N  I G  +
Sbjct: 258 LKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCK 317

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
              + EA  L + M+ RG  P   TY +L++GLC+ G+V +AR     +L K   P+++ 
Sbjct: 318 MLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARM----LLNKVPNPNVVL 373

Query: 386 YNTLLYGYCRSGNIGEA-FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
           +NTL+ GY   G + EA  ++ + + S    P + TYNTLI GLC+ G L  A++L   M
Sbjct: 374 FNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEM 433

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
             +G  P+VITYTI+++  CK G L  AR   +EM  KGL  +   Y   I+   K    
Sbjct: 434 QIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKV 493

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
            +A  +  +M +KG  PD+ T+N L+ GLCK+   EEA  L + M+ +G I + ITY ++
Sbjct: 494 QDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTL 553

Query: 565 IHASLE-----------------------------------MGDLRRGRDLFNNMLRKGL 589
           IHA L                                     G++ +G  LF +M+ KGL
Sbjct: 554 IHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGL 613

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
           +P  ++  +LI+     G ++ A  +  +M  +G+ P+++TYN+LINGLC+  R  +A  
Sbjct: 614 NPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALN 673

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL---L 706
           LF  ++ EGI P+  TY  LI+ +C  G + +A  L    +D    P+  T   L+   +
Sbjct: 674 LFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFI 733

Query: 707 KQLDKDY 713
           K+ D+++
Sbjct: 734 KEGDQEF 740



 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 155/493 (31%), Positives = 256/493 (51%), Gaps = 5/493 (1%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V+    +   M R+G +P+      +I  L   G   +  ++   M   G  P + T+N 
Sbjct: 251 VDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFND 310

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
            +   CK   + EA +L+  M  RG +PN  TY VL+ G  R G++++AR L+  +    
Sbjct: 311 AIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPN 370

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALN-LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           + +    +N +I GY  +G L EA   + E M++ G  P + TYN LI GLCK G +  A
Sbjct: 371 VVL----FNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSA 426

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
           R    EM  K   P++I+Y  L+  +C+ G + EA  + DE+  + L    V YN LI  
Sbjct: 427 RELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISA 486

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           LC+   ++ A  +  +M ++G  PD+ T+  ++ G CK+     A   + +ML +G+  +
Sbjct: 487 LCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIAN 546

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              Y T I   L+ G   EA +L  +ML +G P D ITYN L+  LC+ G++E+   L  
Sbjct: 547 TITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFE 606

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
            M+  G  P++I+   +I+     G+++   +   +M+ +GL+P +VTY  LI+     G
Sbjct: 607 DMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTG 666

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
           R + A   F ++QV+GI P+ ITYN LI+  C+    D A+ L     + G +PN+ T+ 
Sbjct: 667 RAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWY 726

Query: 668 ILINENCNAGNWQ 680
           IL++     G+ +
Sbjct: 727 ILVSNFIKEGDQE 739



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 105/215 (48%), Gaps = 5/215 (2%)

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           EML+KG  P + T+ V++  LC +  ++ A  LL+ M   G +P+ I Y ++IHA  ++G
Sbjct: 225 EMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVG 284

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
            +     L   ML  G  P + T+   IH      R+  A      M ++G  PN  TY 
Sbjct: 285 RVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYG 344

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR-LYKEMLD 691
            L++GLCR+ ++D+A  L   +      PN   +  LIN   + G   EA   +++ ML 
Sbjct: 345 VLMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLS 400

Query: 692 REIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
               PD  T++ L+L    K Y V A E +  + +
Sbjct: 401 VGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQI 435



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 6/211 (2%)

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD-GF 554
           AGE K   T++A  +Q +     F   L    +  +G  + G   +A  LL  M G    
Sbjct: 142 AGEFK---TTDALLMQMKQEGIVFRESLFILIMKHYG--RAGLPGQATRLLLDMRGVYSC 196

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            P   +Y  ++   L     +   ++F  ML KG+SPT+ T+ V++ A      ++ A  
Sbjct: 197 EPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACA 256

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
              +M   G  PN I Y  LI+ L ++ R+++   L  +M   G +P+  T+   I+  C
Sbjct: 257 LLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLC 316

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
                 EA +L   ML R   P+  T+  L+
Sbjct: 317 KMLRIHEAAKLVDRMLLRGFTPNSFTYGVLM 347


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 149/444 (33%), Positives = 238/444 (53%), Gaps = 2/444 (0%)

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM--QGRGCSPNGVTYNVLITG 287
           V R M + G  P++ +YN +L   C E   QEALELL  M   G  C P+ V+Y  +I G
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208

Query: 288 FSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPT 347
           F + G+L++A G   +ML  G+  +  +Y+ II    +   + +A+ +   MV  GV P 
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268

Query: 348 LATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFD 407
             TYN +++G C  G+  +A     +M    V PD+++YN+L+   C++G   EA  +FD
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328

Query: 408 ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG 467
            +  R L P + TY TL+ G    G L     L + M+  GI P+   ++I++    K G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
            +  A   F++M ++GL PD   Y T I    K G   +A R  E+M+ +   P  I YN
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
            L+H LC     ++A EL+ +M+  G   D I + SII +  + G +     LF+ M+R 
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
           G+ P ++TY+ LI  +   G+++ A    + M   G++P+ +TYN LING C++ R++ A
Sbjct: 509 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568

Query: 648 YGLFIDMEEEGILPNKYTYTILIN 671
             LF +ME  G+ P+  TY I++ 
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQ 592



 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 149/487 (30%), Positives = 256/487 (52%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K+  +++    +++ML  G+LP+V   + II  L       KA EV   M + G+ P+
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             TYN+++  +C  G+ +EA+  L +M   G  P+ VTYN L+    +NG   +AR +  
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M K GLK    +Y  ++ GY+ KG LVE   L + MV  G+ P    ++ILI    K G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           +V  A   F +M ++ + PD ++Y T++   C+SG + +A   F+++    L P  + YN
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           +LI  LC +   + A++L   M+++GI  D I +  +++  CK G +  + + F+ M+R 
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G++PD   Y+T I G    G   EA +L   M++ G  PD +TYN L++G CK+  +E+A
Sbjct: 509 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             L R+M   G  PD ITY  I+    +       ++L+  +   G    L TY +++H 
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHG 628

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
                  + A   F  + +  ++    T+N +I  L ++ R D+A  LF  +   G++P+
Sbjct: 629 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688

Query: 663 KYTYTIL 669
             TY+++
Sbjct: 689 VRTYSLM 695



 Score =  265 bits (678), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 162/520 (31%), Positives = 266/520 (51%), Gaps = 2/520 (0%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           +I    LL  +   K   +   +V  +M + G +P+V + N ++K L D   S +A E+ 
Sbjct: 126 AIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELL 185

Query: 232 RMMGEFG--IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           +MM + G    P +V+Y T+++ F KEG++ +A     EM  RG  PN VTY+ +I    
Sbjct: 186 QMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALC 245

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           +   +++A  ++  M+K G+  +  +YN I+ GY   G   EA+   ++M + GV P + 
Sbjct: 246 KAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVV 305

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           TYN L+  LCK GR ++AR  F  M ++ + P+I +Y TLL GY   G + E   L D +
Sbjct: 306 TYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 365

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
               + P    ++ LI    + G ++ A  +   M  QG+ PD +TY  ++   CK G +
Sbjct: 366 VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRV 425

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A  +F +M+ + L P    Y + I          +A  L  EML +G   D I +N +
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSI 485

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           +   CK G + E+ +L   MV  G  PD ITY+++I      G +     L  +M+  G+
Sbjct: 486 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGM 545

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
            P  VTY  LI+ +    R+E A + F EM+  G+ P++ITYN ++ GL + RR   A  
Sbjct: 546 KPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKE 605

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           L++ + E G      TY I+++  C      EALR+++ +
Sbjct: 606 LYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 645



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 152/553 (27%), Positives = 266/553 (48%), Gaps = 44/553 (7%)

Query: 195 VFNKMLRNGLLPDVKNCN-RIIKVLRDNGFSVKAREVYRMMGEFG---IKPSIVTYNTML 250
           VF+++LR G    +   N  +  V R +  +  +R  Y  M   G   + P++ TY  ++
Sbjct: 41  VFDELLRRGRGASIYGLNCALADVARHSPAAAVSR--YNRMARAGADEVTPNLCTYGILI 98

Query: 251 DSFCKEGEM-----------------------------------QEALEL-LWEMQGRGC 274
            S C  G +                                    +A+++ L  M   GC
Sbjct: 99  GSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGC 158

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH--SYNPIICGYSEKGLLVEA 332
            PN  +YN+L+ G       ++A  L++ M   G        SY  +I G+ ++G L +A
Sbjct: 159 IPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKA 218

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
                EM+ RG+ P + TY+ +I  LCK   +  A      M++  V+P+  +YN++++G
Sbjct: 219 YGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHG 278

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
           YC SG   EA     ++ S  + P VVTYN+L+D LC+ G    A+++ ++M  +G+ P+
Sbjct: 279 YCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE 338

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
           + TY  ++ G    G L       + M+R G+ P+ + ++  I    K G   +A  +  
Sbjct: 339 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFS 398

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           +M  +G  PD +TY  ++  LCK G +E+A     +M+ +   P +I Y S+IH+     
Sbjct: 399 KMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFD 458

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
              + ++L   ML +G+    + +  +I +H   GR+  +   F  M   G++P++ITY+
Sbjct: 459 KWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYS 518

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
            LI+G C   ++D+A  L   M   G+ P+  TY  LIN  C     ++AL L++EM   
Sbjct: 519 TLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESS 578

Query: 693 EIEPDYCTHSALL 705
            + PD  T++ +L
Sbjct: 579 GVSPDIITYNIIL 591



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 140/498 (28%), Positives = 250/498 (50%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   +++ + V   M++NG++P+ +  N I+     +G   +A    + M   G++P +V
Sbjct: 246 KAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVV 305

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TYN+++D  CK G   EA ++   M  RG  P   TY  L+ G++  G L +  GL+  M
Sbjct: 306 TYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 365

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           ++ G+  + + ++ +IC Y+++G + +A+ +  +M  +G+ P   TY  +I  LCK GRV
Sbjct: 366 VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRV 425

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            DA   F +M+ + + P  I YN+L++  C      +A  L  E+  R +    + +N++
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSI 485

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           ID  C+ G +  +++L + M+  G+ PD+ITY+ +++G C  G +  A +    M+  G+
Sbjct: 486 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGM 545

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
           +PD   Y T I G  K+    +A  L  EM + G  PD+ITYN+++ GL +      A E
Sbjct: 546 KPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKE 605

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           L   +   G   +  TY  I+H   +         +F N+    L     T+ ++I A  
Sbjct: 606 LYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 665

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
             GR + A   F+ +   G+ P+V TY+ +   L     +++   LF+ MEE G   N  
Sbjct: 666 KVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSR 725

Query: 665 TYTILINENCNAGNWQEA 682
               ++ +    G+   A
Sbjct: 726 MLNSIVRKLLQRGDITRA 743



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/417 (29%), Positives = 205/417 (49%), Gaps = 7/417 (1%)

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG---VAPTLATY 351
           E AR +  ++L+ G   S +  N  +   +       A++    M   G   V P L TY
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSP-AAAVSRYNRMARAGADEVTPNLCTY 94

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF-LLFDELR 410
            ILI   C  GR+         +++K    D I++  LL G C      +A  ++   + 
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG--ILPDVITYTIMVNGSCKMGN 468
               +P V +YN L+ GLC     + A +L + M + G    PDV++YT ++NG  K G+
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
           L  A   ++EML +G+ P+   Y++ IA   K     +A  +   M+  G  P+  TYN 
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           +VHG C  G  +EA   L+KM  DG  PD +TY S++    + G     R +F++M ++G
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
           L P + TY  L+  +A +G L         M   GI PN   ++ LI    +  ++DQA 
Sbjct: 335 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            +F  M ++G+ P+  TY  +I   C +G  ++A+R +++M+D  + P    +++L+
Sbjct: 395 LVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 130/475 (27%), Positives = 228/475 (48%), Gaps = 15/475 (3%)

Query: 103 KPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVL 162
           +P+ A+ F + + +  GV+ D   + ++++ L ++G             C     + D +
Sbjct: 284 QPKEAIGFLKKMHSD-GVEPDVVTYNSLMDYLCKNGR------------CTEARKMFDSM 330

Query: 163 IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG 222
              GL     I     LL  Y  K  + +   + + M+RNG+ P+    + +I      G
Sbjct: 331 TKRGLKP--EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 223 FSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYN 282
              +A  V+  M + G+ P  VTY T++   CK G +++A+    +M     SP  + YN
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
            LI       + ++A+ LI +ML  G+ +    +N II  + ++G ++E+  L + MV  
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           GV P + TY+ LI G C  G++ +A      M+   + PD ++YNTL+ GYC+   + +A
Sbjct: 509 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
            +LF E+ S  + P ++TYN ++ GL +      A++L   +   G   ++ TY I+++G
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHG 628

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            CK      A   F  +    LQ +   +   I   LK+G   EA  L   + A G  PD
Sbjct: 629 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
           + TY+++   L + G LEE ++L   M  +G   +     SI+   L+ GD+ R 
Sbjct: 689 VRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 151/510 (29%), Positives = 264/510 (51%), Gaps = 5/510 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y +   +   +  F +M      P     N I+  L D  +  +A +VY  M   G+ P 
Sbjct: 63  YARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPD 122

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           + T+   L SFC       AL LL  +  RG     V Y  ++ G   +G    AR L  
Sbjct: 123 LHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFD 178

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            ML   +  +  ++N ++    ++G ++EA  L  +++ RG++  L TYNI I GLC+ G
Sbjct: 179 QMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAG 238

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R+ +A  R  + +R   +PD+++YNTL+ G C+     EA      + ++  +P   TYN
Sbjct: 239 RLPEAV-RLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYN 297

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           T+IDG C+   ++ A +L ++ + +G +PD +TY  ++NG C  G++  A E FNE   K
Sbjct: 298 TIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAK 357

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G++PD   Y + + G    G    A ++  EM  +G  PD+ TYN++++GLCK+G++ +A
Sbjct: 358 GIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDA 417

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             ++   +  G++PD  T+ ++I    +   L     L   M   G++P  +TY  +++ 
Sbjct: 418 TVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNG 477

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
               G++      F EM +KG  PN ITYN LI   CR  ++++A  + + M +EG+ P+
Sbjct: 478 LCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPD 537

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDR 692
             ++  LI   C  G+ + A  L++++ ++
Sbjct: 538 AVSFNTLIYGFCRNGDLEGAYLLFQKLEEK 567



 Score =  271 bits (694), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 153/478 (32%), Positives = 251/478 (52%), Gaps = 1/478 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F++ML   + P++   N+++  L   G  ++A  +   + + G+  ++ TYN  +   C
Sbjct: 176 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLC 235

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           + G + EA+ L+  M+     P+ VTYN LI G  +    ++A   +R M+  G      
Sbjct: 236 EAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF 294

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +YN II GY +  ++ EA  L ++ V +G  P   TY  LI GLC  G V  A   F E 
Sbjct: 295 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 354

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
             K + PDI+ YN+L+ G C  G I  A  + +E+      P + TYN +I+GLC+ G++
Sbjct: 355 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 414

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
             A  +  + I +G LPDV T+  +++G CK   L  A +    M   G+ PD   Y + 
Sbjct: 415 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 474

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           + G  K G  +E     +EM+ KG  P+ ITYN+L+   C+   +EEA++++ KM  +G 
Sbjct: 475 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 534

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            PD +++ ++I+     GDL     LF  +  KG S T  T+  LI A + +  + +A  
Sbjct: 535 HPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEK 594

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
            F EM  KG R +  TY  LI+G C+   +D+AY   ++M ++G +P+  T+  +IN 
Sbjct: 595 IFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINS 652



 Score =  271 bits (693), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 157/483 (32%), Positives = 246/483 (50%), Gaps = 1/483 (0%)

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
           L  +G +  AR+++  M    + P++  +N +L + CK G++ EA  LL ++  RG S N
Sbjct: 164 LYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSIN 223

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
             TYN+ I G    G L +A  L+  M    +     +YN +I G  +K +  EA++   
Sbjct: 224 LFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLR 282

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
            M+ +G  P   TYN +I G CK   V +A     + + K  +PD ++Y +L+ G C  G
Sbjct: 283 RMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEG 342

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
           ++  A  LF+E +++ + P +V YN+L+ GLC  G +  A Q+   M  +G  PD+ TY 
Sbjct: 343 DVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYN 402

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
           I++NG CKMGN+S A    N+ + KG  PD F + T I G  K      A +L E M   
Sbjct: 403 IVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEY 462

Query: 518 GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
           G  PD ITYN +++GLCK G + E NE  ++M+  G  P+ ITY  +I        +   
Sbjct: 463 GIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEA 522

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
             +   M ++GL P  V++  LI+     G LE A++ F +++ KG      T+N LI  
Sbjct: 523 SKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGA 582

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
                 +  A  +F +M  +G   + YTY +LI+ +C   N   A     EM+ +   P 
Sbjct: 583 FSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPS 642

Query: 698 YCT 700
             T
Sbjct: 643 MST 645



 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 165/559 (29%), Positives = 275/559 (49%), Gaps = 20/559 (3%)

Query: 103 KPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVL 162
           +P IALR  R +       R    +CT++  L   G    A  + + ++  ++       
Sbjct: 138 RPHIALRLLRALP-----HRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFP----- 187

Query: 163 IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG 222
                    ++   + +L    K+  V +  L+  K+++ G+  ++   N  I+ L + G
Sbjct: 188 ---------NLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAG 238

Query: 223 FSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYN 282
              +A  +   M  + + P +VTYNT++   CK+   QEA+  L  M  +GC P+  TYN
Sbjct: 239 RLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYN 297

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
            +I G+ +   +++A  L++D +  G      +Y  +I G   +G +  AL L  E   +
Sbjct: 298 TIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAK 357

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           G+ P +  YN L+ GLC  G +  A     EM  +   PDI +YN ++ G C+ GNI +A
Sbjct: 358 GIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDA 417

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
            ++ ++   +  +P V T+NTLIDG C+   L+ A QL E M   GI PD ITY  ++NG
Sbjct: 418 TVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNG 477

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            CK G ++   E F EM+ KG  P+   Y   I    +     EA ++  +M  +G  PD
Sbjct: 478 LCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPD 537

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
            +++N L++G C+ G LE A  L +K+   G+     T+ ++I A     ++     +F+
Sbjct: 538 AVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFD 597

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
            ML KG      TY VLI        ++ A+M+  EM  KG  P++ T+  +IN L    
Sbjct: 598 EMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNH 657

Query: 643 RIDQAYGLFIDMEEEGILP 661
           R+ QA G+   M + G++P
Sbjct: 658 RVFQAVGIIHIMVKIGVVP 676



 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 144/491 (29%), Positives = 237/491 (48%), Gaps = 32/491 (6%)

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           Y   + ++ + G +++A++    M    C P    YN ++         +QA  +   ML
Sbjct: 56  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 115

Query: 306 KLGLKVSAHS-------------------------------YNPIICGYSEKGLLVEALN 334
             G+    H+                               Y  ++CG    G   +A  
Sbjct: 116 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQ 175

Query: 335 LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
           L ++M+   V P LA +N +++ LCK G V +A     +++++ +  ++ +YN  + G C
Sbjct: 176 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLC 235

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
            +G + EA  L D +R+   VP VVTYNTLI GLC+    + A      M+NQG LPD  
Sbjct: 236 EAGRLPEAVRLVDGMRAY-AVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF 294

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
           TY  +++G CK+  +  A E   + + KG  PD+  Y + I G    GD   A  L  E 
Sbjct: 295 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 354

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
            AKG  PD++ YN LV GLC  G +  A +++ +M  +G  PD  TY  +I+   +MG++
Sbjct: 355 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 414

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
                + N+ + KG  P + T+  LI  +  R +L+ A      M   GI P+ ITYN++
Sbjct: 415 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 474

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           +NGLC+  ++++    F +M  +G  PN  TY ILI   C +   +EA ++  +M    +
Sbjct: 475 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 534

Query: 695 EPDYCTHSALL 705
            PD  + + L+
Sbjct: 535 HPDAVSFNTLI 545



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 131/417 (31%), Positives = 215/417 (51%), Gaps = 5/417 (1%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K SMV++   +    +  G +PD      +I  L   G   +A E++      GIKP 
Sbjct: 303 YCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPD 362

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           IV YN+++   C +G +  AL+++ EM   GC P+  TYN++I G  + G +  A  ++ 
Sbjct: 363 IVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMN 422

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           D +  G      ++N +I GY ++  L  AL L E M   G+AP   TYN ++ GLCK G
Sbjct: 423 DAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAG 482

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           +V++    F EM+ K   P+ I+YN L+  +CRS  + EA  +  ++    L P  V++N
Sbjct: 483 KVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFN 542

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           TLI G CR GDLE A  L + +  +G      T+  ++       N+ MA + F+EML K
Sbjct: 543 TLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSK 602

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G + D + Y   I G  K  +   AY    EM+ KGF P + T+  +++ L     + +A
Sbjct: 603 GHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQA 662

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
             ++  MV  G +P+ +   +I++A  +  ++   + L  ++++KG   +  TY VL
Sbjct: 663 VGIIHIMVKIGVVPEVV--DTILNA--DKKEIAAPKILVEDLMKKG-HISYPTYEVL 714



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 170/381 (44%), Gaps = 8/381 (2%)

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS--YNTLLYGYCRSGNIGEAFL 404
           T+  Y  LI  L   GRV           R  + P  I   Y   +  Y R+G + +A  
Sbjct: 16  TVPAYCALIRPLASAGRVDAVD-AAVASARSRLSPATIHPLYVASIRAYARAGRLRDAVD 74

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
            F+ +      P    YN ++D L      + A ++   M+  G+ PD+ T+TI +   C
Sbjct: 75  AFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFC 134

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
                 +A      +  +G      AY T + G    G T +A +L ++ML     P+L 
Sbjct: 135 LTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLA 190

Query: 525 TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM 584
            +N ++H LCK G + EA  LL K++  G   +  TY   I    E G L     L + M
Sbjct: 191 AFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGM 250

Query: 585 LRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRI 644
            R    P +VTY  LI     +   + A  Y   M  +G  P+  TYN +I+G C++  +
Sbjct: 251 -RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMV 309

Query: 645 DQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
            +A  L  D   +G +P++ TY  LIN  C  G+ + AL L+ E   + I+PD   +++L
Sbjct: 310 QEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSL 369

Query: 705 LLKQLDKDYKVHAVEYLESLT 725
           +     +   +HA++ +  + 
Sbjct: 370 VKGLCLQGLILHALQVMNEMA 390


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 159/536 (29%), Positives = 274/536 (51%), Gaps = 6/536 (1%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF---GIKP 241
           K  + ++   VF +M+ NG+ P++   N +I      G   K +EV RM+ E    G KP
Sbjct: 250 KAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIG---KWKEVVRMLEEMSAGGPKP 306

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
           +  TY ++L+  CK G  +EA      M G+G  P+  TY +++ G++  G L +   L+
Sbjct: 307 NCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLL 366

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
             M+  G+  + H +N     Y++ G++ +A+++  +M  +G++P   +Y  LI  LCK 
Sbjct: 367 NLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKL 426

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           GRV DA  +F +M+ + V PDI+ +++L+YG C      +   LF E+ +  + P +V +
Sbjct: 427 GRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFF 486

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           NT++  LC+ G +   Q+L +++   G+ PDVI+Y  +++G C  G +  A +    M+ 
Sbjct: 487 NTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVS 546

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
            GL+PD F+Y T + G  K G    AY    +ML+ G  P ++TYN ++HGL +     E
Sbjct: 547 VGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSE 606

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A EL   M+  G   D  TY  I++   +   +     +F N+  KGL   ++T+ ++I 
Sbjct: 607 AKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIG 666

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
           A    GR E A   F+ +   G+  NV+TY  ++  L     +++   LF  ME+ G  P
Sbjct: 667 ALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAP 726

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHA 717
           N      L+    + G+   A     ++ +R    +  T S L+      +Y+ HA
Sbjct: 727 NSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHA 782



 Score =  265 bits (678), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 151/530 (28%), Positives = 265/530 (50%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F +M+  G+ PDV     +I  L       +A  V++ M + G+KP+I TYN ++  + 
Sbjct: 225 LFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYL 284

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
             G+ +E + +L EM   G  PN  TY  L+    +NG   +AR     M+  G+K S  
Sbjct: 285 SIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVT 344

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +Y  ++ GY+ KG L E  +L   MV  G++P    +NI      K G +  A   F +M
Sbjct: 345 TYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKM 404

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
            ++ + PD +SY  L+   C+ G + +A + F+++ +  + P +V +++L+ GLC     
Sbjct: 405 RQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKW 464

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           E  ++L   M+N GI P+++ +  ++   CK G +   +   + +   G++PD  +Y T 
Sbjct: 465 EKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTL 524

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I G    G   EA +L E M++ G  PD  +YN L+HG CK G ++ A    RKM+ +G 
Sbjct: 525 IDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGI 584

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            P  +TY +I+H   +       ++L+ NM+  G    + TY ++++       ++ A  
Sbjct: 585 TPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIK 644

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F  +  KG++ N+IT+N +I  L +  R + A  LF  +   G++ N  TY +++    
Sbjct: 645 MFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLI 704

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
             G+ +E   L+  M      P+    +AL+ + L +     A  YL  L
Sbjct: 705 EEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKL 754



 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 148/542 (27%), Positives = 275/542 (50%), Gaps = 3/542 (0%)

Query: 186 KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE---FGIKPS 242
           K + E   ++  +M   G +PD  + N ++K L +   + +A E+  MM +   +   P+
Sbjct: 143 KRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPN 202

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +V+Y+T+++ F  EG++ +   L  EM  RG  P+ VTY  +I G  +    ++A  + +
Sbjct: 203 VVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQ 262

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M+  G+K +  +YN +I GY   G   E + + EEM   G  P   TY  L+  LCK G
Sbjct: 263 QMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNG 322

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R  +AR  F  M+ K + P + +Y  +L+GY   G + E   L + + +  + P    +N
Sbjct: 323 RCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFN 382

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
                  + G ++ A  +   M  QG+ PD ++Y  +++  CK+G +  A   FN+M+ +
Sbjct: 383 IFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINE 442

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G+ PD   +++ + G   +    +   L  EML  G  P+++ +N ++  LCK G + E 
Sbjct: 443 GVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEG 502

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             L+  +   G  PD I+Y ++I      G +     L   M+  GL P   +Y  L+H 
Sbjct: 503 QRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHG 562

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
           +   GR++ A+ +F +M   GI P V+TYN +++GL + +R  +A  L+++M   G   +
Sbjct: 563 YCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWD 622

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLE 722
            YTY I++N  C +    EA+++++ +  + ++ +  T + ++   L    K  A++   
Sbjct: 623 IYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFA 682

Query: 723 SL 724
           ++
Sbjct: 683 AI 684



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 165/601 (27%), Positives = 288/601 (47%), Gaps = 30/601 (4%)

Query: 152 CVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNC 211
           C       D +IG G+    S+    ++L  Y  K  + +   + N M+ NG+ P+    
Sbjct: 324 CREARFFFDSMIGKGIKP--SVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIF 381

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
           N         G   KA +++  M + G+ P  V+Y  ++D+ CK G + +A     +M  
Sbjct: 382 NIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMIN 441

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
            G +P+ V ++ L+ G     + E+   L  +ML +G+  +   +N I+C   ++G ++E
Sbjct: 442 EGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVME 501

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
              L + +   GV P + +YN LI G C  G + +A      M+   + PD  SYNTLL+
Sbjct: 502 GQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLH 561

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
           GYC++G I  A+  F ++ S  + P VVTYNT++ GL +      A++L  NMIN G   
Sbjct: 562 GYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKW 621

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           D+ TY I++NG CK   +  A + F  +  KGLQ +   +   I   LK G   +A  L 
Sbjct: 622 DIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLF 681

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
             + A G   +++TY ++V  L + GSLEE + L   M  +G  P+     +++   L  
Sbjct: 682 AAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHR 741

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLI-------HAHAARG----------------- 607
           GD+ R     + +  +  S    T ++LI       + H A+                  
Sbjct: 742 GDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALI 801

Query: 608 ----RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
               R++ A+  F EM +KG+ P+V+TYN +++GL +  R  +A  L++ M       N 
Sbjct: 802 KKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNI 861

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLES 723
           YTY I++N  C +    EA ++++ +  + ++ +  T + ++   L    K  A++   +
Sbjct: 862 YTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAA 921

Query: 724 L 724
           +
Sbjct: 922 I 922



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 141/506 (27%), Positives = 241/506 (47%), Gaps = 39/506 (7%)

Query: 239 IKPSIVTYNTMLDSFCKEGEMQ-----------------------------------EAL 263
           + P+  TY+ ++  FC+ G ++                                   EA+
Sbjct: 90  VAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAM 149

Query: 264 E-LLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK---LGLKVSAHSYNPI 319
           + LL  M   GC P+ V+YN+L+ G       E+A  L+  M          +  SY+ +
Sbjct: 150 DVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTV 209

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           I G+  +G + +  NL  EM+ RG+ P + TY  +I GLCK      A   F +M+   V
Sbjct: 210 INGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGV 269

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
            P+I +YN L++GY   G   E   + +E+ +    P   TY +L++ LC+ G    A+ 
Sbjct: 270 KPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARF 329

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
             ++MI +GI P V TY IM++G    G LS   +  N M+  G+ P+   +    +   
Sbjct: 330 FFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYA 389

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           K G   +A  +  +M  +G  PD ++Y  L+  LCKLG +++A     +M+ +G  PD +
Sbjct: 390 KCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIV 449

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
            ++S+++    +    +  +LF  ML  G+ P +V +  ++      GR+         +
Sbjct: 450 VFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSI 509

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
           +  G+RP+VI+YN LI+G C    ID+A  L   M   G+ P+ ++Y  L++  C AG  
Sbjct: 510 ECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRI 569

Query: 680 QEALRLYKEMLDREIEPDYCTHSALL 705
             A   +++ML   I P   T++ +L
Sbjct: 570 DSAYSHFRKMLSNGITPGVVTYNTIL 595



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 161/633 (25%), Positives = 291/633 (45%), Gaps = 65/633 (10%)

Query: 155 MHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRI 214
           MH +L++++  G+S   +  I ++    Y K  ++++ + +FNKM + GL PD  +   +
Sbjct: 362 MHDLLNLMVANGISP--NHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGAL 419

Query: 215 IKVLRDNG-----------------------FSV------------KAREVYRMMGEFGI 239
           I  L   G                       FS             K  E++  M   GI
Sbjct: 420 IDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGI 479

Query: 240 KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
            P+IV +NT+L + CKEG + E   L+  ++  G  P+ ++YN LI G    G +++A  
Sbjct: 480 HPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASK 539

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
           L+  M+ +GLK  + SYN ++ GY + G +  A +   +M++ G+ P + TYN +++GL 
Sbjct: 540 LLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLF 599

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
           +  R S+A+  +  M+      DI +YN +L G C+S  + EA  +F  L S+ L   ++
Sbjct: 600 QTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNII 659

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
           T+N +I  L + G  E A  L   +   G++ +V+TY ++V    + G+L      F+ M
Sbjct: 660 TFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAM 719

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV--------- 530
            + G  P+       +   L  GD S A     ++  + F  +  T ++L+         
Sbjct: 720 EKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQ 779

Query: 531 -HG------------------LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
            H                   + K   +++A  L R+M+  G  PD +TY +I+H   + 
Sbjct: 780 HHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQT 839

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
           G     ++L+ +M+       + TY ++++       ++ AF  F  +  KG++ N+IT+
Sbjct: 840 GRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITF 899

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           N +I  L +  R + A  LF  +   G++P+  TY ++       G+ +E   L+  M  
Sbjct: 900 NIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEK 959

Query: 692 REIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
                D    +AL+ + L +     A  YL  L
Sbjct: 960 SGTPLDSRLLNALVRRLLQRGDISRAGAYLSKL 992



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 139/478 (29%), Positives = 239/478 (50%), Gaps = 14/478 (2%)

Query: 242 SIVTYNTMLDSFCKEG------EMQEALELLWEMQGRGC----SPNGVTYNVLITGFSRN 291
           S+V +N +L +  +           E +  L+    R C    +PN  TY++LI  F R 
Sbjct: 48  SVVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRMVRDCYIKVAPNRCTYSILIGCFCRM 107

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN-LEEEMVTRGVAPTLAT 350
           G LE        +LK G ++     N ++ G  +   + EA++ L + M   G  P   +
Sbjct: 108 GHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVS 167

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNV---IPDIISYNTLLYGYCRSGNIGEAFLLFD 407
           YNIL+ GLC   R  +A      M    V    P+++SY+T++ G+   G + + + LF 
Sbjct: 168 YNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFL 227

Query: 408 ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG 467
           E+  R + P VVTY T+IDGLC+    + A+ + + MI+ G+ P++ TY  +++G   +G
Sbjct: 228 EMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIG 287

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
                     EM   G +P+   Y + +    K G   EA    + M+ KG  P + TY 
Sbjct: 288 KWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYG 347

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
           +++HG    G+L E ++LL  MV +G  P+H  +     A  + G + +  D+FN M ++
Sbjct: 348 IMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQ 407

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
           GLSP  V+Y  LI A    GR++ A + F++M  +G+ P+++ +++L+ GLC + + ++ 
Sbjct: 408 GLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKV 467

Query: 648 YGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             LF +M   GI PN   +  ++   C  G   E  RL   +    + PD  +++ L+
Sbjct: 468 EELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLI 525



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 124/452 (27%), Positives = 199/452 (44%), Gaps = 28/452 (6%)

Query: 177  DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
            + LL  Y K   ++     F KML NG+ P V   N I+  L       +A+E+Y  M  
Sbjct: 557  NTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMIN 616

Query: 237  FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
             G K  I TYN +L+  CK   + EA+++   +  +G   N +T+N++I    + G  E 
Sbjct: 617  SGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKED 676

Query: 297  ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
            A  L   +   GL  +  +Y  ++    E+G L E  +L   M   G AP     N L+ 
Sbjct: 677  AMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVR 736

Query: 357  GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC---------------------- 394
             L   G +S A     ++  +N   +  + + L+  +                       
Sbjct: 737  RLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEAN 796

Query: 395  ------RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
                  ++  I +A+ LF E+  + L P VVTYNT++ GL + G    A++L  +MIN  
Sbjct: 797  SSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSR 856

Query: 449  ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
               ++ TY I++NG CK   +  A + F  +  KGLQ +   +   I   LK G   +A 
Sbjct: 857  TQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAM 916

Query: 509  RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
             L   + A G  PD++TY ++   L + GSLEE + L   M   G   D     +++   
Sbjct: 917  DLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRL 976

Query: 569  LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
            L+ GD+ R     + +  K  S    T + LI
Sbjct: 977  LQRGDISRAGAYLSKLDEKNFSLEASTTSELI 1008



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 118/501 (23%), Positives = 208/501 (41%), Gaps = 63/501 (12%)

Query: 203  GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
            G+ PDV + N +I      G   +A ++   M   G+KP   +YNT+L  +CK G +  A
Sbjct: 513  GVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSA 572

Query: 263  LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
                 +M   G +P  VTYN ++ G  +     +A+ L  +M+  G K   ++YN I+ G
Sbjct: 573  YSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNG 632

Query: 323  YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
              +   + EA+ + + + ++G+   + T+NI+I  L K GR  DA   F  +    ++ +
Sbjct: 633  LCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQN 692

Query: 383  IISY-----------------------------------NTLLYGYCRSGNIGEAFLLFD 407
            +++Y                                   N L+      G+I  A     
Sbjct: 693  VVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLS 752

Query: 408  ELRSRNLVPTVVTYNTLIDGLC----------------------------RYGDLEVAQQ 439
            +L  RN      T + LI                                +   ++ A  
Sbjct: 753  KLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYS 812

Query: 440  LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
            L   M+ +G+ PDV+TY  +++G  + G  S A+E +  M+    Q + + Y   + G  
Sbjct: 813  LFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLC 872

Query: 500  KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
            K     EA+++ + + +KG   ++IT+N+++  L K G  E+A +L   +  +G +PD +
Sbjct: 873  KSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVV 932

Query: 560  TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
            TY  +    +E G L     LF  M + G          L+     RG +  A  Y S++
Sbjct: 933  TYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKL 992

Query: 620  QVKGIRPNVITYNALINGLCR 640
              K       T + LI+   R
Sbjct: 993  DEKNFSLEASTTSELISLFSR 1013



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 105/359 (29%), Positives = 165/359 (45%), Gaps = 28/359 (7%)

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG--EAFLLFDELRSRNLVPTVVT 420
           RVS  R R  E+ R  VI D            RSG++G  +A  LFDEL       +VV 
Sbjct: 4   RVSAVRDRCLELER--VIAD----------RARSGSLGLGDALKLFDELLPHARPASVVA 51

Query: 421 YNTLIDGLCR-------YGDLEVAQQLKENMINQ---GILPDVITYTIMVNGSCKMGNLS 470
           +N L+  + R         + E    L   M+      + P+  TY+I++   C+MG+L 
Sbjct: 52  FNHLLAAVSRSSGRRSTTSESETVVSLFNRMVRDCYIKVAPNRCTYSILIGCFCRMGHLE 111

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR-LQEEMLAKGFPPDLITYNVL 529
                F  +L+ G + D       + G        EA   L + M   G  PD ++YN+L
Sbjct: 112 HGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNIL 171

Query: 530 VHGLCKLGSLEEANELLRKMVGD---GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           + GLC     EEA ELL  M  D      P+ ++Y+++I+     G + +  +LF  M+ 
Sbjct: 172 LKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMD 231

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
           +G+ P +VTYT +I         + A   F +M   G++PN+ TYN LI+G   + +  +
Sbjct: 232 RGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKE 291

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
              +  +M   G  PN  TY  L+N  C  G  +EA   +  M+ + I+P   T+  +L
Sbjct: 292 VVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIML 350



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 102/244 (41%), Gaps = 43/244 (17%)

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           L+ +R       +G L LGD   A +L +E+L    P  ++ +N L+  + +        
Sbjct: 13  LELERVIADRARSGSLGLGD---ALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTT 69

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK---GLSPTLVTYTVLI 600
                +V                             LFN M+R     ++P   TY++LI
Sbjct: 70  SESETVV----------------------------SLFNRMVRDCYIKVAPNRCTYSILI 101

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID-MEEEGI 659
                 G LE  F  F  +   G R + I  N L+NGLC  +R+ +A  + +  M E G 
Sbjct: 102 GCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVLLQRMPELGC 161

Query: 660 LPNKYTYTILINENCNAGNWQEALRLYKEMLDREI---EPDYCTHSALL-----LKQLDK 711
           +P+  +Y IL+   CN    +EAL L   M D ++    P+  ++S ++       Q+DK
Sbjct: 162 MPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDK 221

Query: 712 DYKV 715
            Y +
Sbjct: 222 PYNL 225



 Score = 44.7 bits (104), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 55/282 (19%), Positives = 115/282 (40%), Gaps = 23/282 (8%)

Query: 65   TVEEKPWAFCNNRWVSDHFQAVVSDPELLVRVLNR------IREKPRI--ALRFFRWVET 116
            +VE    +   + + SD +Q          R+LN       I++  RI  A   FR +  
Sbjct: 760  SVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLM 819

Query: 117  QPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKIL 176
            + G+  D   + TIL  L ++G    A  +  +++                   ++I   
Sbjct: 820  K-GLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQ--------------MNIYTY 864

Query: 177  DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
            +++L    K + V++   +F  +   GL  ++   N +I  L   G    A +++  +  
Sbjct: 865  NIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPA 924

Query: 237  FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
             G+ P +VTY  + ++  +EG ++E   L   M+  G   +    N L+    + G++ +
Sbjct: 925  NGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISR 984

Query: 297  ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
            A   +  + +    + A + + +I  +S       A +L E+
Sbjct: 985  AGAYLSKLDEKNFSLEASTTSELISLFSRGEYQHHAKSLPEK 1026


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 176/582 (30%), Positives = 286/582 (49%), Gaps = 38/582 (6%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEFGIKP 241
           Y K   +E+   ++  M+R+G+LPDV   + ++  L RD  FS +A  ++R M + G+ P
Sbjct: 269 YCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFS-EAYALFREMDKIGVAP 327

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCS-------------------------- 275
           + VTY T +DS  K   + E+L LL EM  RG +                          
Sbjct: 328 NHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVL 387

Query: 276 ---------PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEK 326
                    PN VTY VL+    R G ++ A  ++  M +  +  +  +++ I+ G  ++
Sbjct: 388 RHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKR 447

Query: 327 GLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISY 386
           G + +A     +M   G+AP + TY  LI G  K      A   + +ML + V  +    
Sbjct: 448 GCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIV 507

Query: 387 NTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMIN 446
           ++L+ G  ++GNI EA  LF ++  R L+   V Y TL+DGL + G++  A ++ + ++ 
Sbjct: 508 DSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELME 567

Query: 447 QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSE 506
           + + PD + Y + +N  C++G  S A+ F  EM   GL+PD+  Y T I+ + + G+TS+
Sbjct: 568 RNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSK 627

Query: 507 AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
           A +L  EM      P+LITY  LV GL + G +E+A  LL +M   GF P  +TY  ++ 
Sbjct: 628 ALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQ 687

Query: 567 ASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRP 626
           A           ++   M+  GL   +  Y  L+H     G    A +   EM  +GI P
Sbjct: 688 ACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAP 747

Query: 627 NVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLY 686
           + IT+NALI G C+   +D A+  +  M  +G+ PN  T+  L+    +AG   EA  + 
Sbjct: 748 DTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVI 807

Query: 687 KEMLDREIEPDYCTHSALLLKQLDKDYKVHAVE-YLESLTLG 727
            EM    +EP+  T+  L+     K  KV A+  Y E ++ G
Sbjct: 808 CEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKG 849



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 180/639 (28%), Positives = 290/639 (45%), Gaps = 52/639 (8%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           GV  D     T L  L  +GL+  A  + E +V     GI  + + G           + 
Sbjct: 147 GVPWDGVTMSTALVGLSRTGLVGEAAALAEMLV--RGRGIDGLGVVG----------WNA 194

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  Y K   +   L V  +M   GL  DV   N ++     +G +  A EV   M   G
Sbjct: 195 LIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADG 254

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           ++PS+VT+ T++  +CK   ++EA  L   M   G  P+ VT + L+ G  R+G   +A 
Sbjct: 255 VEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAY 314

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L R+M K+G+  +  +Y   I   ++   + E+L L  EMV+RGVA  L  Y  ++  L
Sbjct: 315 ALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRL 374

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
            K G++ +A+      L  N+ P+ ++Y  L+  +CR+GNI  A  +  ++  +++ P V
Sbjct: 375 GKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNV 434

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI-------------------- 458
           VT++++++GL + G +  A      M + GI P+V+TY                      
Sbjct: 435 VTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRD 494

Query: 459 ---------------MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
                          +VNG  K GN+  A   F +M  +GL  D   Y T + G  K G+
Sbjct: 495 MLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGN 554

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
              A ++ +E++ +   PD + YNV ++ LC+LG   EA   L++M   G  PD  TY +
Sbjct: 555 MPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNT 614

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           +I A    G+  +   L N M    + P L+TYT L+      G +E A    +EM   G
Sbjct: 615 MISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAG 674

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
             P  +TY  ++      R       +   M   G+  +   Y  L++  C  G  ++A 
Sbjct: 675 FTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKAT 734

Query: 684 RLYKEMLDREIEPDYCTHSALLL-----KQLDKDYKVHA 717
            +  EML R I PD  T +AL+L       LD  +  +A
Sbjct: 735 IVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYA 773



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 168/586 (28%), Positives = 279/586 (47%), Gaps = 14/586 (2%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           GV  D  ++ T+++ L + G +  A  V+        H + D +      +CV+  +L  
Sbjct: 359 GVAMDLVMYTTVMDRLGKEGKIEEAKDVLR-------HALSDNIT----PNCVTYTVLVD 407

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
                      EQ LL   +M    + P+V   + I+  L   G   KA    R M + G
Sbjct: 408 AHCRAGNIDGAEQMLL---QMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSG 464

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           I P++VTY T++D F K    + AL++  +M   G   N    + L+ G  +NG +E+A 
Sbjct: 465 IAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAE 524

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L +DM + GL +   +Y  ++ G  + G +  AL + +E++ R ++P    YN+ I  L
Sbjct: 525 ALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCL 584

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C+ G+ S+A+    EM    + PD  +YNT++   CR GN  +A  L +E++  ++ P +
Sbjct: 585 CRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNL 644

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           +TY TL+ GL   G +E A+ L   M + G  P  +TY  ++       +  +  E    
Sbjct: 645 ITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHEL 704

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M+  GL  D   Y T +      G T +A  + +EML +G  PD IT+N L+ G CK   
Sbjct: 705 MMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSH 764

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           L+ A     +M+  G  P+  T+ +++      G +     +   M + GL P  +TY +
Sbjct: 765 LDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDI 824

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           L+  +A +     A   + EM  KG  P   TYN+LI+   +   ++QA  LF +M+  G
Sbjct: 825 LVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRG 884

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
           +L    TY IL+N      N  E   L K+M +   +P   T S++
Sbjct: 885 VLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSM 930



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 149/553 (26%), Positives = 255/553 (46%), Gaps = 40/553 (7%)

Query: 207 DVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELL 266
           D  + N  +  L + G    A  V   M + G+    VT +T L    + G + EA  L 
Sbjct: 116 DTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAALA 175

Query: 267 WEM--QGRGCSPNGVT-YNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGY 323
            EM  +GRG    GV  +N LI G+ +  ++  A  ++  M   GL +    YN ++ G+
Sbjct: 176 -EMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGF 234

Query: 324 SEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
              G    A  + E M   GV P++ T+  LI   CK  R+ +A   +  M+R  V+PD+
Sbjct: 235 FYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDV 294

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY------------ 431
           ++ + L+ G CR G   EA+ LF E+    + P  VTY T ID L +             
Sbjct: 295 VTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGE 354

Query: 432 -----------------------GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
                                  G +E A+ +  + ++  I P+ +TYT++V+  C+ GN
Sbjct: 355 MVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGN 414

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
           +  A +   +M  K + P+   +++ + G +K G  ++A     +M   G  P+++TY  
Sbjct: 415 IDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGT 474

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           L+ G  K    E A ++ R M+ +G   ++    S+++   + G++     LF +M  +G
Sbjct: 475 LIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERG 534

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
           L    V Y  L+      G +  A     E+  + + P+ + YN  IN LCRL +  +A 
Sbjct: 535 LLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAK 594

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQ 708
               +M   G+ P++ TY  +I+  C  GN  +AL+L  EM    I+P+  T++ L++  
Sbjct: 595 SFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGL 654

Query: 709 LDKDYKVHAVEYL 721
           L+    V   +YL
Sbjct: 655 LEAGV-VEKAKYL 666



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 136/451 (30%), Positives = 208/451 (46%), Gaps = 53/451 (11%)

Query: 298 RGLIRDMLKLGLKVSAHSYNP----------IICGYSEKGLLVEALNLEEEMVTRGVAPT 347
           R LI  +   GL  +A  + P          II  Y     L  AL+L     + G  P 
Sbjct: 55  RRLIPALASSGLVAAASRFRPVPGDPLTLNSIILSYCSLHALRPALSLLRS--SSGPQPQ 112

Query: 348 LA----TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF 403
           +A    +YNI + GL + G    A     EM ++ V  D ++ +T L G  R+G +GEA 
Sbjct: 113 VAADTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAA 172

Query: 404 LLFDEL-RSRNLVP-TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
            L + L R R +    VV +N LIDG C+  D+  A  + E M  QG+  DV+ Y  +V 
Sbjct: 173 ALAEMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVA 232

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
           G    G+   A E    M   G++P    +TT I    K+    EA+ L E M+  G  P
Sbjct: 233 GFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLP 292

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM---------- 571
           D++T + LV GLC+ G   EA  L R+M   G  P+H+TY + I +  ++          
Sbjct: 293 DVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLL 352

Query: 572 -------------------------GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAAR 606
                                    G +   +D+  + L   ++P  VTYTVL+ AH   
Sbjct: 353 GEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRA 412

Query: 607 GRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
           G ++ A     +M+ K + PNV+T+++++NGL +   I +A G    M++ GI PN  TY
Sbjct: 413 GNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTY 472

Query: 667 TILINENCNAGNWQEALRLYKEMLDREIEPD 697
             LI+        + AL +Y++ML   +E +
Sbjct: 473 GTLIDGFFKCQGQEAALDVYRDMLHEGVEAN 503



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/404 (29%), Positives = 195/404 (48%), Gaps = 4/404 (0%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   +   L V  +++   L PD    N  I  L   G   +A+   + M   G++P   
Sbjct: 551 KTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQA 610

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TYNTM+ + C+EG   +AL+LL EM+     PN +TY  L+ G    G +E+A+ L+ +M
Sbjct: 611 TYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEM 670

Query: 305 LKLGLKVSAHSYNPII--CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
              G   +  +Y  ++  C  S    ++  L + E M+  G+   +  YN L++ LC  G
Sbjct: 671 ASAGFTPTPLTYRRVLQACSGSRSPYVI--LEVHELMMGAGLHADITVYNTLVHVLCCHG 728

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
               A     EML + + PD I++N L+ G+C+S ++  AF  + ++  + L P + T+N
Sbjct: 729 MTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFN 788

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           TL+ GL   G +  A  +   M   G+ P+ +TY I+V G  K  N   A   + EM+ K
Sbjct: 789 TLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSK 848

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G  P    Y + I+   K G  ++A  L  EM  +G      TY++L++G  KL +  E 
Sbjct: 849 GFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEV 908

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
             LL+ M   GF P   T +S+  A  + G     R L   + +
Sbjct: 909 RILLKDMKELGFKPSKGTISSMSRAFSKPGMTWEARRLLKTLFK 952



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 65/131 (49%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           D+L+  Y KKS   + L ++ +M+  G +P     N +I      G   +A+E++  M  
Sbjct: 823 DILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKR 882

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G+  +  TY+ +L+ + K     E   LL +M+  G  P+  T + +   FS+ G   +
Sbjct: 883 RGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSRAFSKPGMTWE 942

Query: 297 ARGLIRDMLKL 307
           AR L++ + K+
Sbjct: 943 ARRLLKTLFKV 953


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 150/492 (30%), Positives = 262/492 (53%), Gaps = 12/492 (2%)

Query: 205 LPDVKNCNRIIKVLR----DNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQ 260
           L DV++ N + +++R    + GF      VY      G  P I+   T++  FC+ G+ +
Sbjct: 100 LEDVESNNHLRQMVRTGELEEGFKFLENMVYH-----GNVPDIIPCTTLIRGFCRLGKTR 154

Query: 261 EALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII 320
           +A ++L  ++G G  P+ +TYNV+I+G+ + GE+  A  ++    ++ +     +YN I+
Sbjct: 155 KAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLD---RMSVSPDVVTYNTIL 211

Query: 321 CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
               + G L +A+ + + M+ R   P + TY ILI   C+   V  A     EM  +   
Sbjct: 212 RSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCT 271

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           PD+++YN L+ G C+ G + EA    +++ S    P V+T+N ++  +C  G    A++L
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKL 331

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
             +M+ +G  P V+T+ I++N  C+ G L  A +   +M + G QP+  +Y   + G  K
Sbjct: 332 LADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK 391

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
                 A    E M+++G  PD++TYN ++  LCK G +E+A E+L ++   G  P  IT
Sbjct: 392 EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT 451

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           Y ++I    + G   +   L + M  K L P  +TY+ L+   +  G+++ A  +F E +
Sbjct: 452 YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFE 511

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
             GIRPN +T+N+++ GLC+ R+ D+A    + M   G  PN+ +YTILI      G  +
Sbjct: 512 RMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAK 571

Query: 681 EALRLYKEMLDR 692
           EAL L  E+ ++
Sbjct: 572 EALELLNELCNK 583



 Score =  261 bits (668), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 144/462 (31%), Positives = 237/462 (51%), Gaps = 3/462 (0%)

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           V  N  L    + GE++E  + L  M   G  P+ +    LI GF R G+  +A  ++  
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           +   G      +YN +I GY + G +  AL++ + M    V+P + TYN ++  LC  G+
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGK 219

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           +  A      ML+++  PD+I+Y  L+   CR   +G A  L DE+R R   P VVTYN 
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           L++G+C+ G L+ A +   +M + G  P+VIT+ I++   C  G    A +   +MLRKG
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
             P    +   I    + G    A  + E+M   G  P+ ++YN L+HG CK   ++ A 
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
           E L +MV  G  PD +TY +++ A  + G +    ++ N +  KG SP L+TY  +I   
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
           A  G+   A     EM+ K ++P+ ITY++L+ GL R  ++D+A   F + E  GI PN 
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 519

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            T+  ++   C +     A+     M++R  +P+  +++ L+
Sbjct: 520 VTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILI 561



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 135/426 (31%), Positives = 221/426 (51%), Gaps = 9/426 (2%)

Query: 202 NGLLPDVKNCNRIIKVLRDNGFSVKAREV---YRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           +G +PDV   N +I     +G+  KA E+     ++    + P +VTYNT+L S C  G+
Sbjct: 166 SGAVPDVITYNVMI-----SGY-CKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGK 219

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           +++A+E+L  M  R C P+ +TY +LI    R+  +  A  L+ +M   G      +YN 
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           ++ G  ++G L EA+    +M + G  P + T+NI++  +C  GR  DA     +MLRK 
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
             P ++++N L+   CR G +G A  + +++      P  ++YN L+ G C+   ++ A 
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
           +  E M+++G  PD++TY  M+   CK G +  A E  N++  KG  P    Y T I G 
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
            K G T +A +L +EM AK   PD ITY+ LV GL + G ++EA +   +    G  P+ 
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 519

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
           +T+ SI+    +     R  D    M+ +G  P   +YT+LI   A  G  + A    +E
Sbjct: 520 VTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNE 579

Query: 619 MQVKGI 624
           +  KG+
Sbjct: 580 LCNKGL 585



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 138/472 (29%), Positives = 234/472 (49%), Gaps = 3/472 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +E+       M+ +G +PD+  C  +I+     G + KA ++  ++   G  P ++TYN 
Sbjct: 118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNV 177

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           M+  +CK GE+  AL +L  M     SP+ VTYN ++     +G+L+QA  ++  ML+  
Sbjct: 178 MISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD 234

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
                 +Y  +I        +  A+ L +EM  RG  P + TYN+L+ G+CK GR+ +A 
Sbjct: 235 CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAI 294

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               +M      P++I++N +L   C +G   +A  L  ++  +   P+VVT+N LI+ L
Sbjct: 295 KFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFL 354

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           CR G L  A  + E M   G  P+ ++Y  +++G CK   +  A E+   M+ +G  PD 
Sbjct: 355 CRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDI 414

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             Y T +    K G   +A  +  ++ +KG  P LITYN ++ GL K G   +A +LL +
Sbjct: 415 VTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDE 474

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M      PD ITY+S++      G +      F+   R G+ P  VT+  ++       +
Sbjct: 475 MRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQ 534

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
            + A  +   M  +G +PN  +Y  LI GL       +A  L  ++  +G++
Sbjct: 535 TDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 131/432 (30%), Positives = 229/432 (53%), Gaps = 5/432 (1%)

Query: 158 ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
           IL++L G G  +   +   ++++  Y K   +   L V ++M    + PDV   N I++ 
Sbjct: 159 ILEILEGSG--AVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRS 213

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
           L D+G   +A EV   M +    P ++TY  ++++ C++  +  A++LL EM+ RGC+P+
Sbjct: 214 LCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPD 273

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
            VTYNVL+ G  + G L++A   + DM   G + +  ++N I+      G  ++A  L  
Sbjct: 274 VVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLA 333

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
           +M+ +G +P++ T+NILI  LC+ G +  A     +M +    P+ +SYN LL+G+C+  
Sbjct: 334 DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEK 393

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
            +  A    + + SR   P +VTYNT++  LC+ G +E A ++   + ++G  P +ITY 
Sbjct: 394 KMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYN 453

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
            +++G  K G    A +  +EM  K L+PD   Y++ + G  + G   EA +   E    
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513

Query: 518 GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
           G  P+ +T+N ++ GLCK    + A + L  M+  G  P+  +YT +I      G  +  
Sbjct: 514 GIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEA 573

Query: 578 RDLFNNMLRKGL 589
            +L N +  KGL
Sbjct: 574 LELLNELCNKGL 585



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 166/343 (48%), Gaps = 5/343 (1%)

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
           +  N  L    R+G + E F   + +     VP ++   TLI G CR G    A ++ E 
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           +   G +PDVITY +M++G CK G ++ A    + M    + PD   Y T +      G 
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGK 219

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
             +A  + + ML +   PD+ITY +L+   C+   +  A +LL +M   G  PD +TY  
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           +++   + G L       N+M   G  P ++T+ +++ +  + GR   A    ++M  KG
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
             P+V+T+N LIN LCR   + +A  +   M + G  PN  +Y  L++  C       A+
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399

Query: 684 RLYKEMLDREIEPDYCTHSALLLKQLDKDYKVH-AVEYLESLT 725
              + M+ R   PD  T++  +L  L KD KV  AVE L  L+
Sbjct: 400 EYLERMVSRGCYPDIVTYNT-MLTALCKDGKVEDAVEILNQLS 441



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 84/176 (47%), Gaps = 5/176 (2%)

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRL 609
           V   F  + +   + +   +  G+L  G     NM+  G  P ++  T LI      G+ 
Sbjct: 94  VNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKT 153

Query: 610 ELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL 669
             A      ++  G  P+VITYN +I+G C+   I+ A  +   M    + P+  TY  +
Sbjct: 154 RKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTI 210

Query: 670 INENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKV-HAVEYLESL 724
           +   C++G  ++A+ +   ML R+  PD  T++ +L++   +D  V HA++ L+ +
Sbjct: 211 LRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYT-ILIEATCRDSGVGHAMKLLDEM 265


>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 766

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 182/610 (29%), Positives = 308/610 (50%), Gaps = 14/610 (2%)

Query: 110 FFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDV--LIGGGL 167
           FF+ V    G     + F  I+ +L  +GL       +  ++       LDV  L    L
Sbjct: 108 FFKAVSFH-GFSHSIYAFKIIIHVLASAGLQMEVQIFLRDIISYYKEVNLDVSELFSTLL 166

Query: 168 SSCV------SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDN 221
            S        SI + ++L+ ++ + +M+     VF +  R GL  ++ +CN ++    + 
Sbjct: 167 DSPQDAHMGGSIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEA 226

Query: 222 GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG-----EMQEALELLWEMQGRGCSP 276
             +   R ++  + + G  P++ TY  M++ +CK       ++ +A E+L EM+  G SP
Sbjct: 227 NQTEFIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESP 286

Query: 277 NGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLE 336
             VTY   I G  R G +E A  LIRD+      ++++ YN +I  +   G L EA  L 
Sbjct: 287 TVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELL 346

Query: 337 EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS 396
           E+M + G++PT  +Y+ILI GLCK G+V  A     EM++ NV P +++Y++L  G C+S
Sbjct: 347 EDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKS 406

Query: 397 GNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
           G    +  +F  L +      V++YNTLI+G     D+  A +L   M   G +P+  T+
Sbjct: 407 GLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTF 466

Query: 457 TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA 516
             +++G CK   L  A E F  ML+ G+Q + F          + G   EA +L  E+  
Sbjct: 467 NRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQD 526

Query: 517 KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
            G  P+  TYN+++  LCK    E+A E+L  M+ +   P  I Y ++I    +  +  +
Sbjct: 527 LGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTK 586

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
              L+  ML+ G+ P++VTYT+LI+  + R +++ A+  F EM  KG+ P+ I +  +I 
Sbjct: 587 ALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIA 646

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
           G C++  +  A+ L+ +M + G  PN  TYT LI+         +A  L+ +M    + P
Sbjct: 647 GFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTP 706

Query: 697 DYCTHSALLL 706
           D  T++AL+ 
Sbjct: 707 DGLTYTALIF 716


>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 817

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 199/708 (28%), Positives = 325/708 (45%), Gaps = 105/708 (14%)

Query: 99  RIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWV--------VETV 150
           R +  P+ AL FFR              +C ++ +L+++ L   A  V        V  +
Sbjct: 90  RFKVNPKTALDFFRLASDSFSFSFSLRSYCLLIGLLLDANLSSPARVVLIRLINGNVPVL 149

Query: 151 VCVNMHGILDVLIG-----GGLSSC----VSIKILDLLLLIYTKKSMVEQCLL---VFNK 198
            C N  G+ D  +        LS C    +  K+ DLL+ +Y  +   + C L   VF  
Sbjct: 150 PCGN-GGLRDSRVAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPV 208

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF-----GIKPSIVTYNTMLDSF 253
           +   G+ P    CN ++  L      V+A E  +    F     G+ P +  + T +++F
Sbjct: 209 LANKGMFPSKTTCNILLTSL------VRATEFQKCCEAFHVVCKGVSPDVYLFTTAINAF 262

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA---------RGL---- 300
           CK G+++EA+EL  +M+  G  PN VTYN +I G   +G  ++A         RG+    
Sbjct: 263 CKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTL 322

Query: 301 ----------------------IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
                                 +++M + G   +   YN +I    E G L +A+ +++ 
Sbjct: 323 ITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDL 382

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDAR---------------------------HRF 371
           MV++G++ T +TYN LI G CK G+   A                            H  
Sbjct: 383 MVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHM 442

Query: 372 F--------EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           F        EML +N+ P      TL+ G C+ G   +A  L+ +  ++  +    T N 
Sbjct: 443 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNA 502

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           L+ GLC  G LE   ++++ ++ +G + D ++Y  +++G C    L  A  F +EM++KG
Sbjct: 503 LLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKG 562

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           L+PD + Y+  I G L +    EA +   +    G  PD+ TY+V++ G CK    EE  
Sbjct: 563 LKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQ 622

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
           +L  +M+ +   P+ + Y  +I A    G L    +L  +M  KG+SP   TYT LI   
Sbjct: 623 KLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 682

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
           +   R+E A +   EM+++G+ PNV  Y ALI+G  +L ++ +   L  +M  + + PNK
Sbjct: 683 SIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK 742

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL---LKQ 708
            TYT++I      GN  EA RL  EM ++ I PD  T+   +   LKQ
Sbjct: 743 ITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIYGYLKQ 790



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 161/537 (29%), Positives = 252/537 (46%), Gaps = 35/537 (6%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLR-----DNGFSVKAREVYR----- 232
           + K   VE+ + +F+KM   G++P+V   N +I  L      D  F  K + V R     
Sbjct: 262 FCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPT 321

Query: 233 -------------------------MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLW 267
                                     M E G  P+++ YN ++DS  + G + +A+E+  
Sbjct: 322 LITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKD 381

Query: 268 EMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKG 327
            M  +G S    TYN LI G+ ++G+ + A  L+++ML +G  V+  S+  +IC      
Sbjct: 382 LMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHH 441

Query: 328 LLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYN 387
           +   AL    EM+ R ++P       LI GLCK G+ S A   + + L K  + D  + N
Sbjct: 442 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSN 501

Query: 388 TLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
            LL+G C +G + E F +  E+  R  V   V+YNTLI G C    L+ A    + M+ +
Sbjct: 502 ALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKK 561

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
           G+ PD  TY+I++ G   M  +  A +F+ +  R G+ PD + Y+  I G  K   T E 
Sbjct: 562 GLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEG 621

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
            +L +EM++    P+ + YN L+   C+ G L  A EL   M   G  P+  TYTS+I  
Sbjct: 622 QKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 681

Query: 568 SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
              +  +   + L   M  +GL P +  YT LI  +   G++        EM  K + PN
Sbjct: 682 MSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 741

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
            ITY  +I G  R   + +A  L  +M E+GI+P+  TY   I      G   +A +
Sbjct: 742 KITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIYGYLKQGGVLQAFK 798



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 190/389 (48%), Gaps = 1/389 (0%)

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
           AL++   +  +G+ P+  T NIL+  L +          F  ++ K V PD+  + T + 
Sbjct: 202 ALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAF-HVVCKGVSPDVYLFTTAIN 260

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
            +C+ G + EA  LF ++    +VP VVTYNT+IDGL   G  + A   KE M+ +G+ P
Sbjct: 261 AFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEP 320

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
            +ITY+I+V G  K   +  A     EM  KG  P+   Y   I   ++ G  ++A  ++
Sbjct: 321 TLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIK 380

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
           + M++KG      TYN L+ G CK G  + A  LL++M+  GF  +  ++TS+I      
Sbjct: 381 DLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSH 440

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
                       ML + +SP     T LI      G+   A   + +   KG   +  T 
Sbjct: 441 HMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTS 500

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           NAL++GLC   ++++ + +  ++   G + ++ +Y  LI+  C      EA     EM+ 
Sbjct: 501 NALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVK 560

Query: 692 REIEPDYCTHSALLLKQLDKDYKVHAVEY 720
           + ++PD  T+S L+   L+ +    A+++
Sbjct: 561 KGLKPDNYTYSILIRGLLNMNKVEEAIQF 589



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 167/361 (46%), Gaps = 35/361 (9%)

Query: 188 MVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
           M +  L    +ML   + P       +I  L  +G   KA E++      G      T N
Sbjct: 442 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSN 501

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
            +L   C+ G+++E   +  E+ GRG   + V+YN LI+G   N +L++A   + +M+K 
Sbjct: 502 ALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKK 561

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           GLK   ++Y+ +I G      + EA+    +    G+ P + TY+++I G CK  R  + 
Sbjct: 562 GLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEG 621

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG--------------------------- 400
           +  F EM+  N+ P+ + YN L+  YCRSG +                            
Sbjct: 622 QKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 681

Query: 401 --------EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
                   EA LL +E+R   L P V  Y  LIDG  + G +   + L   M ++ + P+
Sbjct: 682 MSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 741

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
            ITYT+M+ G  + GN++ A    +EM  KG+ PD   Y   I G LK G   +A++  +
Sbjct: 742 KITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIYGYLKQGGVLQAFKGSD 801

Query: 513 E 513
           E
Sbjct: 802 E 802


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  274 bits (700), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 148/493 (30%), Positives = 262/493 (53%), Gaps = 12/493 (2%)

Query: 204 LLPDVKNCNRIIKVLR----DNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEM 259
           +L DV++ N + +++R    + GF      VY      G  P I+   T++  FC+ G+ 
Sbjct: 99  VLEDVESNNHLRQLVRTGELEEGFKFLENMVYH-----GNVPDIIPCTTLIRGFCRMGKT 153

Query: 260 QEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI 319
           ++A ++L  ++G G  P+ +TYNV+I+G+ + GE+  A  ++    ++ +     +YN I
Sbjct: 154 RKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLD---RMSVSPDVVTYNTI 210

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           +    + G L +A+ + + M+ R   P + TY ILI   C+   V  A     EM  +  
Sbjct: 211 LRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGC 270

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
            PD+++YN L+ G C+ G + EA    +++ S    P V+T+N ++  +C  G    A++
Sbjct: 271 TPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEK 330

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           L  +M+ +G  P V+T+ I++N  C+ G L  A +   +M + G QP+  +Y   + G  
Sbjct: 331 LLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFC 390

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           K      A    E M+++G  PD++TYN ++  LCK G +E+A E+L ++   G  P  I
Sbjct: 391 KEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLI 450

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
           TY ++I    + G   +   L + M  K L P  +TY+ L+   +  G+++ A  +F E 
Sbjct: 451 TYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEF 510

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
           +  G+RPN +T+N+++ GLC+ R+ D+A    + M   G  P + +YTILI      G  
Sbjct: 511 ERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMA 570

Query: 680 QEALRLYKEMLDR 692
           +EAL L  E+ ++
Sbjct: 571 KEALELLNELCNK 583



 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 143/462 (30%), Positives = 236/462 (51%), Gaps = 3/462 (0%)

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           V  N  L    + GE++E  + L  M   G  P+ +    LI GF R G+  +A  ++  
Sbjct: 103 VESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEV 162

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           +   G      +YN +I GY + G +  AL++ + M    V+P + TYN ++  LC  G+
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGK 219

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           +  A      ML+++  PD+I+Y  L+   CR   +G+A  L DE+R R   P VVTYN 
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNV 279

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           L++G+C+ G L+ A +   +M + G  P+VIT+ I++   C  G    A +   +MLRKG
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
             P    +   I    + G    A  + E+M   G  P+ ++YN L+HG CK   ++ A 
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAI 399

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
           E L +MV  G  PD +TY +++ A  + G +    ++ N +  KG SP L+TY  +I   
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
           A  G+   A     EM+ K ++P+ ITY++L+ GL R  ++D+A   F + E  G+ PN 
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNA 519

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            T+  ++   C       A+     M++R  +P   +++ L+
Sbjct: 520 VTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILI 561



 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 137/426 (32%), Positives = 223/426 (52%), Gaps = 9/426 (2%)

Query: 202 NGLLPDVKNCNRIIKVLRDNGFSVKAREV---YRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           +G +PDV   N +I     +G+  KA E+     ++    + P +VTYNT+L S C  G+
Sbjct: 166 SGAVPDVITYNVMI-----SGY-CKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGK 219

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           +++A+E+L  M  R C P+ +TY +LI    R+  + QA  L+ +M   G      +YN 
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNV 279

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           ++ G  ++G L EA+    +M + G  P + T+NI++  +C  GR  DA     +MLRK 
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
             P ++++N L+   CR G +G A  + +++      P  ++YN L+ G C+   ++ A 
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAI 399

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
           +  E M+++G  PD++TY  M+   CK G +  A E  N++  KG  P    Y T I G 
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
            K G T +A +L +EM AK   PD ITY+ LV GL + G ++EA +   +    G  P+ 
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNA 519

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
           +T+ SI+    +     R  D    M+ +G  PT  +YT+LI   A  G  + A    +E
Sbjct: 520 VTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNE 579

Query: 619 MQVKGI 624
           +  KG+
Sbjct: 580 LCNKGL 585



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 137/472 (29%), Positives = 234/472 (49%), Gaps = 3/472 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +E+       M+ +G +PD+  C  +I+     G + KA ++  ++   G  P ++TYN 
Sbjct: 118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNV 177

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           M+  +CK GE+  AL +L  M     SP+ VTYN ++     +G+L+QA  ++  ML+  
Sbjct: 178 MISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD 234

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
                 +Y  +I        + +A+ L +EM  RG  P + TYN+L+ G+CK GR+ +A 
Sbjct: 235 CYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAI 294

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               +M      P++I++N +L   C +G   +A  L  ++  +   P+VVT+N LI+ L
Sbjct: 295 KFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFL 354

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           CR G L  A  + E M   G  P+ ++Y  +++G CK   +  A E+   M+ +G  PD 
Sbjct: 355 CRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDI 414

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             Y T +    K G   +A  +  ++ +KG  P LITYN ++ GL K G   +A +LL +
Sbjct: 415 VTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDE 474

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M      PD ITY+S++      G +      F+   R G+ P  VT+  ++       +
Sbjct: 475 MRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQ 534

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
            + A  +   M  +G +P   +Y  LI GL       +A  L  ++  +G++
Sbjct: 535 TDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 132/432 (30%), Positives = 229/432 (53%), Gaps = 5/432 (1%)

Query: 158 ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
           IL+VL G G  +   +   ++++  Y K   +   L V ++M    + PDV   N I++ 
Sbjct: 159 ILEVLEGSG--AVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRS 213

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
           L D+G   +A EV   M +    P ++TY  ++++ C++  + +A++LL EM+ RGC+P+
Sbjct: 214 LCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPD 273

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
            VTYNVL+ G  + G L++A   + DM   G + +  ++N I+      G  ++A  L  
Sbjct: 274 VVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLA 333

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
           +M+ +G +P++ T+NILI  LC+ G +  A     +M +    P+ +SYN LL+G+C+  
Sbjct: 334 DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEK 393

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
            +  A    + + SR   P +VTYNT++  LC+ G +E A ++   + ++G  P +ITY 
Sbjct: 394 KMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYN 453

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
            +++G  K G    A +  +EM  K L+PD   Y++ + G  + G   EA +   E    
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513

Query: 518 GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
           G  P+ +T+N ++ GLCK    + A + L  M+  G  P   +YT +I      G  +  
Sbjct: 514 GVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEA 573

Query: 578 RDLFNNMLRKGL 589
            +L N +  KGL
Sbjct: 574 LELLNELCNKGL 585



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 106/348 (30%), Positives = 171/348 (49%), Gaps = 6/348 (1%)

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
           V+ D+ S N  L    R+G + E F   + +     VP ++   TLI G CR G    A 
Sbjct: 99  VLEDVES-NNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAA 157

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
           ++ E +   G +PDVITY +M++G CK G ++ A    + M    + PD   Y T +   
Sbjct: 158 KILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSL 214

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
              G   +A  + + ML +   PD+ITY +L+   C+   + +A +LL +M   G  PD 
Sbjct: 215 CDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDV 274

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
           +TY  +++   + G L       N+M   G  P ++T+ +++ +  + GR   A    ++
Sbjct: 275 VTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLAD 334

Query: 619 MQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGN 678
           M  KG  P+V+T+N LIN LCR   + +A  +   M + G  PN  +Y  L++  C    
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKK 394

Query: 679 WQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVH-AVEYLESLT 725
              A+   + M+ R   PD  T++  +L  L KD KV  AVE L  L+
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNT-MLTALCKDGKVEDAVEILNQLS 441


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 161/535 (30%), Positives = 271/535 (50%), Gaps = 3/535 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE-VYRMMGEFGIKPSIVTYNTMLDSF 253
               +++ G + D      ++K L  +  +  A + V R M + G  P++ +YN +L   
Sbjct: 113 ALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGL 172

Query: 254 CKEGEMQEALELLWEM--QGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKV 311
           C +   QEALELL  M   G  C P+ V+Y  +I GF + G+L++A G   +ML  G+  
Sbjct: 173 CDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILP 232

Query: 312 SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRF 371
           +  +Y+ II    +   + +A+ +   MV  GV P   TYN +++G C  G+  +A    
Sbjct: 233 NVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292

Query: 372 FEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY 431
            +M    V PD+++YN+L+   C++G   EA  +FD +  R L P + TY TL+ G    
Sbjct: 293 KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATK 352

Query: 432 GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAY 491
           G L     L + M+  GI P+   ++I++    K G +  A   F++M ++GL PD   Y
Sbjct: 353 GALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTY 412

Query: 492 TTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
            T I    K G   +A R  E+M+ +   P  I YN L+H LC     ++A EL+ +M+ 
Sbjct: 413 GTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLD 472

Query: 552 DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLEL 611
            G   D I + SII +  + G +     LF+ M+R G+ P ++TY+ LI  +   G+++ 
Sbjct: 473 RGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDE 532

Query: 612 AFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
           A    + M   G++P+ +TYN LING C++ R++ A  LF +ME  G+ P+  TY I++ 
Sbjct: 533 ATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQ 592

Query: 672 ENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
                     A  LY  + +   + +  T++ +L      +    A+   ++L L
Sbjct: 593 GLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCL 647



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 149/487 (30%), Positives = 256/487 (52%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K+  +++    +++ML  G+LP+V   + II  L       KA EV   M + G+ P+
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             TYN+++  +C  G+ +EA+  L +M   G  P+ VTYN L+    +NG   +AR +  
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M K GLK    +Y  ++ GY+ KG LVE   L + MV  G+ P    ++ILI    K G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           +V  A   F +M ++ + PD ++Y T++   C+SG + +A   F+++    L P  + YN
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           +LI  LC +   + A++L   M+++GI  D I +  +++  CK G +  + + F+ M+R 
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G++PD   Y+T I G    G   EA +L   M++ G  PD +TYN L++G CK+  +E+A
Sbjct: 509 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             L R+M   G  PD ITY  I+    +       ++L+  +   G    L TY +++H 
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHG 628

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
                  + A   F  + +  ++    T+N +I  L ++ R D+A  LF  +   G++P+
Sbjct: 629 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688

Query: 663 KYTYTIL 669
             TY+++
Sbjct: 689 VRTYSLM 695



 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 158/498 (31%), Positives = 260/498 (52%), Gaps = 2/498 (0%)

Query: 194 LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG--IKPSIVTYNTMLD 251
           +V  +M + G +P+V + N ++K L D+  S +A E+ +MM + G    P +V+Y T+++
Sbjct: 148 IVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVIN 207

Query: 252 SFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKV 311
            F KEG++ +A     EM  RG  PN VTY+ +I    +   +++A  ++  M+K G+  
Sbjct: 208 GFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMP 267

Query: 312 SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRF 371
           +  +YN I+ GY   G   EA+   ++M + GV P + TYN L+  LCK GR ++AR  F
Sbjct: 268 NCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMF 327

Query: 372 FEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY 431
             M ++ + P+I +Y TLL GY   G + E   L D +    + P    ++ LI    + 
Sbjct: 328 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQ 387

Query: 432 GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAY 491
           G ++ A  +   M  QG+ PD +TY  ++   CK G +  A  +F +M+ + L P    Y
Sbjct: 388 GKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVY 447

Query: 492 TTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
            + I          +A  L  EML +G   D I +N ++   CK G + E+ +L   MV 
Sbjct: 448 NSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVR 507

Query: 552 DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLEL 611
            G  PD ITY+++I      G +     L  +M+  G+ P  VTY  LI+ +    R+E 
Sbjct: 508 IGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMED 567

Query: 612 AFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
           A + F EM+  G+ P++ITYN ++ GL + RR   A  L++ + E G      TY I+++
Sbjct: 568 ALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILH 627

Query: 672 ENCNAGNWQEALRLYKEM 689
             C      EALR+++ +
Sbjct: 628 GLCKNNLTDEALRMFQNL 645



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 152/553 (27%), Positives = 267/553 (48%), Gaps = 44/553 (7%)

Query: 195 VFNKMLRNGLLPDVKNCN-RIIKVLRDNGFSVKAREVYRMMGEFG---IKPSIVTYNTML 250
           VF+++LR G    +   N  +  V R +  +  +R  Y  M   G   + P++ TY  ++
Sbjct: 41  VFDELLRRGRGASIYGLNCALADVARHSPAAAVSR--YNRMARAGADEVTPNLCTYGILM 98

Query: 251 DSFCKEGEM-----------------------------------QEALEL-LWEMQGRGC 274
            S C  G +                                    +A+++ L  M   GC
Sbjct: 99  GSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGC 158

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH--SYNPIICGYSEKGLLVEA 332
            PN  +YN+L+ G   +   ++A  L++ M   G        SY  +I G+ ++G L +A
Sbjct: 159 IPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKA 218

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
                EM+ RG+ P + TY+ +I  LCK   +  A      M++  V+P+  +YN++++G
Sbjct: 219 YGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHG 278

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
           YC SG   EA     ++ S  + P VVTYN+L+D LC+ G    A+++ ++M  +G+ P+
Sbjct: 279 YCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE 338

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
           + TY  ++ G    G L       + M+R G+ P+ + ++  I    K G   +A  +  
Sbjct: 339 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFS 398

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           +M  +G  PD +TY  ++  LCK G +E+A     +M+ +   P +I Y S+IH+     
Sbjct: 399 KMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFD 458

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
              + ++L   ML +G+    + +  +I +H   GR+  +   F  M   G++P++ITY+
Sbjct: 459 KWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYS 518

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
            LI+G C   ++D+A  L   M   G+ P+  TY  LIN  C     ++AL L++EM   
Sbjct: 519 TLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESS 578

Query: 693 EIEPDYCTHSALL 705
            + PD  T++ +L
Sbjct: 579 GVSPDIITYNIIL 591



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 140/498 (28%), Positives = 250/498 (50%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   +++ + V   M++NG++P+ +  N I+     +G   +A    + M   G++P +V
Sbjct: 246 KAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVV 305

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TYN+++D  CK G   EA ++   M  RG  P   TY  L+ G++  G L +  GL+  M
Sbjct: 306 TYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 365

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           ++ G+  + + ++ +IC Y+++G + +A+ +  +M  +G+ P   TY  +I  LCK GRV
Sbjct: 366 VRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRV 425

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            DA   F +M+ + + P  I YN+L++  C      +A  L  E+  R +    + +N++
Sbjct: 426 EDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSI 485

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           ID  C+ G +  +++L + M+  G+ PD+ITY+ +++G C  G +  A +    M+  G+
Sbjct: 486 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGM 545

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
           +PD   Y T I G  K+    +A  L  EM + G  PD+ITYN+++ GL +      A E
Sbjct: 546 KPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKE 605

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           L   +   G   +  TY  I+H   +         +F N+    L     T+ ++I A  
Sbjct: 606 LYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 665

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
             GR + A   F+ +   G+ P+V TY+ +   L     +++   LF+ MEE G   N  
Sbjct: 666 KVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSR 725

Query: 665 TYTILINENCNAGNWQEA 682
               ++ +    G+   A
Sbjct: 726 MLNSIVRKLLQRGDITRA 743



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/417 (29%), Positives = 206/417 (49%), Gaps = 7/417 (1%)

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG---VAPTLATY 351
           E AR +  ++L+ G   S +  N  +   +       A++    M   G   V P L TY
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSP-AAAVSRYNRMARAGADEVTPNLCTY 94

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF-LLFDELR 410
            IL+   C  GR+         +++K  I D I++  +L G C      +A  ++   + 
Sbjct: 95  GILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMT 154

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG--ILPDVITYTIMVNGSCKMGN 468
               +P V +YN L+ GLC     + A +L + M + G    PDV++YT ++NG  K G+
Sbjct: 155 QLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
           L  A   ++EML +G+ P+   Y++ IA   K     +A  +   M+  G  P+  TYN 
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           +VHG C  G  +EA   L+KM  DG  PD +TY S++    + G     R +F++M ++G
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
           L P + TY  L+  +A +G L         M   GI PN   ++ LI    +  ++DQA 
Sbjct: 335 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAM 394

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            +F  M ++G+ P+  TY  +I   C +G  ++A+R +++M+D  + P    +++L+
Sbjct: 395 LVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 130/475 (27%), Positives = 228/475 (48%), Gaps = 15/475 (3%)

Query: 103 KPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVL 162
           +P+ A+ F + + +  GV+ D   + ++++ L ++G             C     + D +
Sbjct: 284 QPKEAIGFLKKMHSD-GVEPDVVTYNSLMDYLCKNGR------------CTEARKMFDSM 330

Query: 163 IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG 222
              GL     I     LL  Y  K  + +   + + M+RNG+ P+    + +I      G
Sbjct: 331 TKRGLKP--EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 223 FSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYN 282
              +A  V+  M + G+ P  VTY T++   CK G +++A+    +M     SP  + YN
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
            LI       + ++A+ LI +ML  G+ +    +N II  + ++G ++E+  L + MV  
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           GV P + TY+ LI G C  G++ +A      M+   + PD ++YNTL+ GYC+   + +A
Sbjct: 509 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
            +LF E+ S  + P ++TYN ++ GL +      A++L   +   G   ++ TY I+++G
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHG 628

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            CK      A   F  +    LQ +   +   I   LK+G   EA  L   + A G  PD
Sbjct: 629 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
           + TY+++   L + G LEE ++L   M  +G   +     SI+   L+ GD+ R 
Sbjct: 689 VRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743


>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
          Length = 825

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 147/489 (30%), Positives = 266/489 (54%), Gaps = 1/489 (0%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G+ P + +YN ++D F KEGE+ +A +L ++M+ +G  PN VTY+ LI G  +  E+++A
Sbjct: 219 GLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKA 278

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             ++R M+  G++ +  +YN +I GYS  G+  E++ + +EM +  + P +   N  +  
Sbjct: 279 ERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTA 338

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           LCK GR+ +AR  F  M+ K   PD+ISY  LL+GY  +G I     LF+ +    +VP 
Sbjct: 339 LCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPD 398

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
              +NTLI+   R G ++ +  + E+M  QG+ PD+IT++ +++  C++G L  A E FN
Sbjct: 399 RHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFN 458

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT-YNVLVHGLCKL 536
            M+  G+ PD   Y+  I G+    D  +A  L  +ML+KG PP  I  +  +++ LCK 
Sbjct: 459 HMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKE 518

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G + E  +++  ++  G  P+ IT+ S++     +G+++    L ++M   G+ P + TY
Sbjct: 519 GRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTY 578

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
             L+  +   GR++ A   F +M  K +    ++YN +++GL + RR   A  +F +M E
Sbjct: 579 NTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIE 638

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVH 716
            G+  + +TY  ++   C      EA  L +++    ++ D  T + ++        +  
Sbjct: 639 SGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQE 698

Query: 717 AVEYLESLT 725
           A E   +++
Sbjct: 699 AKELFAAIS 707



 Score =  265 bits (677), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 159/535 (29%), Positives = 280/535 (52%), Gaps = 1/535 (0%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           +I   ++L+  Y +    +  L VF ++LR GL PDV + N +I      G   KA +++
Sbjct: 188 TIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLF 247

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M E GI P++VTY+++++  CK  EM +A  +L +M G G  PN +TYN LI G+S +
Sbjct: 248 YKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTS 307

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G  +++  + ++M    L     + N  +    + G + EA ++ + MV +G  P + +Y
Sbjct: 308 GMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISY 367

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
             L++G    G ++   + F  M+ + V+PD   +NTL+  Y R G + ++ L+F+++  
Sbjct: 368 GALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTK 427

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           + + P ++T++T+I   CR G L+ A +   +MI+ G+ PD   Y+ ++ G C   +L  
Sbjct: 428 QGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVK 487

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGEL-KLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
           A+E  ++ML KG+ P    + T I   L K G  +E   + + ++  G  P+LIT+N LV
Sbjct: 488 AKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLV 547

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
            G C +G+++EA  LL  M   G  PD  TY +++    + G +     LF +ML K ++
Sbjct: 548 DGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVT 607

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
            T V+Y +++H      R  +A   F EM   G+  ++ TY  ++ GLCR    D+A  L
Sbjct: 608 LTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANML 667

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
              +    +  +  T+ I+I      G  QEA  L+  +    + P   T+  ++
Sbjct: 668 LEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMI 722



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 138/437 (31%), Positives = 238/437 (54%), Gaps = 4/437 (0%)

Query: 262 ALELLWEMQGRGC---SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           A+EL   M    C   +P   TYN+LI  + R    +    +   +L+ GL     SYN 
Sbjct: 170 AVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNA 229

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           +I G+S++G + +A +L  +M  +G+ P + TY+ LI GLCK   +  A     +M+   
Sbjct: 230 LIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAG 289

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
           V P+ ++YN L++GY  SG   E+  +F E+ S  LVP V   N+ +  LC++G ++ A+
Sbjct: 290 VRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEAR 349

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
            + ++M+ +G  PDVI+Y  +++G    G ++     FN M+ +G+ PDR  + T I   
Sbjct: 350 DIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAY 409

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
            +LG   ++  + E+M  +G  PD+IT++ ++   C+LG L++A E    M+  G  PD 
Sbjct: 410 ARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDT 469

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT-YTVLIHAHAARGRLELAFMYFS 617
             Y+ +I       DL + ++L ++ML KG+ P  +  +T +I+     GR+        
Sbjct: 470 AVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVD 529

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
            +   G RPN+IT+N+L++G C +  + +A GL   ME  G+ P+ YTY  L++  C  G
Sbjct: 530 LIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHG 589

Query: 678 NWQEALRLYKEMLDREI 694
              +AL L+++ML + +
Sbjct: 590 RIDDALTLFRDMLHKRV 606



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 140/507 (27%), Positives = 246/507 (48%), Gaps = 1/507 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y+   M ++ + VF +M  + L+PDV NCN  +  L  +G   +AR+++  M   G KP 
Sbjct: 304 YSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPD 363

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +++Y  +L  +   G +     L   M   G  P+   +N LI  ++R G ++++  +  
Sbjct: 364 VISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFE 423

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           DM K G+     +++ +I  +   G L +A+     M+  GV P  A Y+ LI G C   
Sbjct: 424 DMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRR 483

Query: 363 RVSDARHRFFEMLRKNVIPDIISY-NTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
            +  A+    +ML K + P  I +  +++   C+ G + E   + D +      P ++T+
Sbjct: 484 DLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITF 543

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           N+L+DG C  G+++ A  L ++M + G+ PD+ TY  +V+G CK G +  A   F +ML 
Sbjct: 544 NSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLH 603

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
           K +     +Y   + G  +   T  A  +  EM+  G    + TY  ++ GLC+    +E
Sbjct: 604 KRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDE 663

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           AN LL K+       D +T+  +I A  ++G  +  ++LF  +   GL PT++TY V+I 
Sbjct: 664 ANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMIT 723

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
                   E A   FS M+     P+    N +I  L     + +A      ++++GILP
Sbjct: 724 NLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILP 783

Query: 662 NKYTYTILINENCNAGNWQEALRLYKE 688
              T ++LI      G ++E ++L  E
Sbjct: 784 EATTTSLLIYLFSVNGKYREYIKLLPE 810



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 105/335 (31%), Positives = 174/335 (51%)

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           P I +YN L+  Y R+        +F  L    L P V +YN LIDG  + G+++ A  L
Sbjct: 187 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 246

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
              M  QGI+P+V+TY+ ++NG CK   +  A     +M+  G++P+   Y   I G   
Sbjct: 247 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYST 306

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
            G   E+ R+ +EM +    PD+   N  +  LCK G ++EA ++   MV  G  PD I+
Sbjct: 307 SGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVIS 366

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           Y +++H     G +    +LFN M+ +G+ P    +  LI+A+A  G ++ + + F +M 
Sbjct: 367 YGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMT 426

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
            +G+ P++IT++ +I+  CRL R+D A   F  M + G+ P+   Y+ LI   CN  +  
Sbjct: 427 KQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLV 486

Query: 681 EALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKV 715
           +A  L  +ML + I P        ++  L K+ +V
Sbjct: 487 KAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRV 521



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 182/370 (49%), Gaps = 11/370 (2%)

Query: 366 DARHRFFEML-RKNVIPDIISYNTLLYGYCRSGNIG----------EAFLLFDELRSRNL 414
           DARH F E+L R++        N LL    R+              E F   D       
Sbjct: 126 DARHLFDELLLRRDAPAPARGLNELLSALARAPPSAACRDVPALAVELFKRMDRCACPEA 185

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            PT+ TYN LI+   R    ++   +   ++  G+ PDV +Y  +++G  K G +  A +
Sbjct: 186 APTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHD 245

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
            F +M  +G+ P+   Y++ I G  K  +  +A R+  +M+  G  P+ +TYN L+HG  
Sbjct: 246 LFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYS 305

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
             G  +E+  + ++M     +PD     S + A  + G ++  RD+F++M+ KG  P ++
Sbjct: 306 TSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVI 365

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           +Y  L+H +A  G +      F+ M  +G+ P+   +N LIN   RL  +D++  +F DM
Sbjct: 366 SYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDM 425

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYK 714
            ++G+ P+  T++ +I+  C  G   +A+  +  M+D  + PD   +S L+  Q ++   
Sbjct: 426 TKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDL 485

Query: 715 VHAVEYLESL 724
           V A E +  +
Sbjct: 486 VKAKELISDM 495



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 83/177 (46%), Gaps = 2/177 (1%)

Query: 162 LIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDN 221
           +I  G++  VSI     +L    + +  ++  ++  K+    +  D+   N +I+ +   
Sbjct: 636 MIESGMA--VSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKV 693

Query: 222 GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY 281
           G   +A+E++  +  +G+ P+I+TY  M+ +  KE   ++A  L   M+   C+P+    
Sbjct: 694 GRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRIL 753

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
           N +I      GE+ +A   +  + K G+   A + + +I  +S  G   E + L  E
Sbjct: 754 NEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPE 810


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 167/543 (30%), Positives = 277/543 (51%), Gaps = 19/543 (3%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLR-NGLLPDVKNCNRIIKVL---RDN-GFSVKARE 229
           I ++L+ +  +K  V+  L + ++ML+     P   N   I+      RD  G +V   E
Sbjct: 194 IRNILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEE 253

Query: 230 VYRMMGEFG---IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           +  ++ +F    + P+ +    ++   C+ G    A ++L  +   G      + N L+T
Sbjct: 254 IVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLT 313

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM---VTRG 343
              R  E ++   L+ +M ++ ++ +  ++  +I    +   + EAL + E+M    + G
Sbjct: 314 ALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNG 373

Query: 344 --VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN--VIPDIISYNTLLYGYCRSGNI 399
             V P + TYN LI GLCK GR  +      E +R     +P+ ++YN L+ GYC++  I
Sbjct: 374 FLVEPDVITYNTLIDGLCKVGRQEEGLG-LVERMRSQPRCMPNTVTYNCLIDGYCKASMI 432

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
             A  LFD++    + P VVT NTL+DG+C++G +  A +    M  +G+  + +TYT +
Sbjct: 433 EAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTAL 492

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           +   C + N+  A E F+EML  G  PD   Y T I+G  + G    A  +  +M   GF
Sbjct: 493 IRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGF 552

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
            PD++++NVL++G C+   L+EA E+L++M   G  PD +TY ++I    + GD      
Sbjct: 553 SPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHR 612

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM-QVKGIRPNVITYNALINGL 638
           L   M+++GL PT+VTY  LIHA+   G L+ A   F +M     + PN + YN LIN L
Sbjct: 613 LMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSL 672

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW-QEALRLYKEMLDREIEPD 697
           CR  ++D A  L  DM+ +G+ PN  T+  +  +     NW  +A  L   M +    PD
Sbjct: 673 CRKNQVDLALSLMDDMKVKGVKPNTNTFNAMF-KGLQEKNWLSKAFELMDRMTEHACNPD 731

Query: 698 YCT 700
           Y T
Sbjct: 732 YIT 734



 Score =  255 bits (651), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 187/638 (29%), Positives = 298/638 (46%), Gaps = 35/638 (5%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           AL+FF WV+     + D  +    LE + E                 N H  L  L    
Sbjct: 103 ALKFFNWVQANSPCQ-DSPLLSFTLEAVFEHASREP-----------NSHNKLLDLFKTS 150

Query: 167 LSSCV--SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS 224
            S  +  S+    LL+  + +  MV++  LV+N++  +  L  ++N   +I VL   G  
Sbjct: 151 KSHKIPLSVNAATLLIRCFGRAQMVDESFLVYNELCPSRRLTHIRNI--LIDVLFRKGRV 208

Query: 225 VKA----REVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALE------LLWEMQGRGC 274
             A     E+ +   EF   P+  T + +  +  K  ++  A++      L+ +      
Sbjct: 209 DDALHLLDEMLQPKAEF--PPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEV 266

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
            PN +    LI+   R+G  ++A  ++  ++KLG  + A S N ++              
Sbjct: 267 FPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNT 326

Query: 335 LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN-----VIPDIISYNTL 389
           L  EM    + P + T+ ILI  LCK+ RV +A   F +M         V PD+I+YNTL
Sbjct: 327 LLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTL 386

Query: 390 LYGYCRSGNIGEAFLLFDELRSR-NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
           + G C+ G   E   L + +RS+   +P  VTYN LIDG C+   +E A++L + M   G
Sbjct: 387 IDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDG 446

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
           + P+V+T   +V+G CK G ++ A EFFNEM  KGL+ +   YT  I     + +  +A 
Sbjct: 447 VPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAM 506

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
            L +EML  G  PD I Y  L+ GL + G L+ A+ +L KM   GF PD +++  +I+  
Sbjct: 507 ELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGF 566

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
                L    ++   M   G+ P  VTY  LI   +  G    A     +M  +G+ P V
Sbjct: 567 CRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTV 626

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEG-ILPNKYTYTILINENCNAGNWQEALRLYK 687
           +TY ALI+  C    +D+A  +F DM     + PN   Y ILIN  C       AL L  
Sbjct: 627 VTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMD 686

Query: 688 EMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
           +M  + ++P+  T +A+     +K++   A E ++ +T
Sbjct: 687 DMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMT 724



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 129/461 (27%), Positives = 217/461 (47%), Gaps = 54/461 (11%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRM------MGEFGIKPSIVTYNT 248
           V + +++ G + +  +CN ++  L       +ARE  RM      M E  I+P++VT+  
Sbjct: 292 VLHGLMKLGGVMEAASCNALLTALG------RAREFKRMNTLLAEMKEMDIQPNVVTFGI 345

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCS-----PNGVTYNVLITGFSRNGELEQARGLIRD 303
           +++  CK   + EALE+  +M G   +     P+ +TYN LI G  + G  E+  GL+  
Sbjct: 346 LINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVER 405

Query: 304 ML-KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           M  +     +  +YN +I GY +  ++  A  L ++M   GV P + T N L+ G+CK G
Sbjct: 406 MRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHG 465

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R++ A   F EM  K +  + ++Y  L+  +C   NI +A  LFDE+      P  + Y 
Sbjct: 466 RINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYY 525

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           TLI GL + G L+ A  +   M   G  PD++++ +++NG C+   L  A E   EM   
Sbjct: 526 TLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENA 585

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF----------------------- 519
           G++PD   Y T I+   K GD S A+RL ++M+ +G                        
Sbjct: 586 GIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEA 645

Query: 520 -------------PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
                        PP+ + YN+L++ LC+   ++ A  L+  M   G  P+  T+ ++  
Sbjct: 646 MKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFK 705

Query: 567 ASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
              E   L +  +L + M     +P  +T  +L    +A G
Sbjct: 706 GLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVG 746



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 153/329 (46%), Gaps = 36/329 (10%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K SM+E    +F++M ++G+ P+V   N ++  +  +G    A E +  M   G+K +
Sbjct: 426 YCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGN 485

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY--------------------- 281
            VTY  ++ +FC    +++A+EL  EM   GCSP+ + Y                     
Sbjct: 486 AVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLS 545

Query: 282 --------------NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKG 327
                         NVLI GF R  +L++A  ++++M   G+K    +YN +I  +S+ G
Sbjct: 546 KMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTG 605

Query: 328 LLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN-VIPDIISY 386
               A  L ++MV  G+ PT+ TY  LI+  C  G + +A   F +M   + V P+ + Y
Sbjct: 606 DFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIY 665

Query: 387 NTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMIN 446
           N L+   CR   +  A  L D+++ + + P   T+N +  GL     L  A +L + M  
Sbjct: 666 NILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTE 725

Query: 447 QGILPDVITYTIMVNGSCKMGNLSMAREF 475
               PD IT  I+      +G  +  + F
Sbjct: 726 HACNPDYITMEILTEWLSAVGETAKLKSF 754



 Score = 41.6 bits (96), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 41/202 (20%), Positives = 85/202 (42%), Gaps = 28/202 (13%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G+K D   + T++    ++G   +A+ +++ +V     G++  ++  G            
Sbjct: 586 GIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMV---KEGLVPTVVTYGA----------- 631

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK-----AREVYRM 233
           L+  Y     +++ + +F  M     +P     N +I  +  N    K     A  +   
Sbjct: 632 LIHAYCLNGNLDEAMKIFRDMSSTSKVPP----NTVIYNILINSLCRKNQVDLALSLMDD 687

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M   G+KP+  T+N M     ++  + +A EL+  M    C+P+ +T  +L    S  GE
Sbjct: 688 MKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGE 747

Query: 294 LEQARGLIRDMLKLGLKVSAHS 315
             + +  ++     G +VSA +
Sbjct: 748 TAKLKSFVQ-----GYEVSASA 764


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 163/535 (30%), Positives = 274/535 (51%), Gaps = 1/535 (0%)

Query: 171 VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV 230
           V++ +   L+ ++ ++  V+  L + ++M  N L  D+   N  I      G    + + 
Sbjct: 228 VNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKF 287

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
           +  M   G+ P  VTY +M+   CK   + EA+EL  +++     P    YN +I G+  
Sbjct: 288 FHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGS 347

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
            G+ ++A GL+      G   S  +YN I+    +K  + EAL + EEM  R   P + T
Sbjct: 348 AGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPT 406

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           YNILI  LC+ G+++ A     +M R  + P++++ N ++   C++  + EA  +F+ + 
Sbjct: 407 YNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMD 466

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
            +   P  VT+++LIDGL + G ++ A  L E M++ G +P  I YT ++    K G   
Sbjct: 467 DKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKE 526

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
              + + EM+  G  PD     T +    K G+T +   L  E+ A GF PD  +Y++L+
Sbjct: 527 DGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILI 586

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
           HGL K G   E  EL   M   G + D   Y ++I    + G + +   L   M  KG  
Sbjct: 587 HGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHP 646

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           PT+VTY  +I   A   RL+ A+M F E +  GI+ NV+ Y++LI+G  ++ RID+AY +
Sbjct: 647 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLI 706

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             ++ ++G+ PN YT+  L++    A    EAL  ++ M D +  P+  T+S L+
Sbjct: 707 MEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILI 761



 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 178/658 (27%), Positives = 308/658 (46%), Gaps = 52/658 (7%)

Query: 83  FQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRS 142
           F+   S   +L+  L+ +RE   + + F +  E   G + +  +F T++ +    G + +
Sbjct: 191 FRPAFSAYTILIGALSEVREPDPMLILFHQMQEL--GYEVNVHLFTTLIRVFAREGRVDA 248

Query: 143 AYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRN 202
           A              +LD +    L +   I + ++ +  + K   V+     F++M  +
Sbjct: 249 AL------------SLLDEMKSNSLDA--DIVLYNVCIDCFGKAGKVDMSWKFFHEMKSH 294

Query: 203 GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM----------------------GEF--- 237
           GL+PD      +I VL       +A E++  +                      G+F   
Sbjct: 295 GLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEA 354

Query: 238 ----------GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITG 287
                     G  PS++ YN +L    K+  ++EAL +  EM+ R   PN  TYN+LI  
Sbjct: 355 YGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMK-RDAVPNVPTYNILIDM 413

Query: 288 FSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPT 347
             R G+L  A  +  DM + GL  +  + N +I    +   L EA ++ E M  +   P 
Sbjct: 414 LCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPN 473

Query: 348 LATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFD 407
             T++ LI GL K GRV DA   + +ML    +P  I Y +L+  + + G   +   ++ 
Sbjct: 474 AVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYK 533

Query: 408 ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG 467
           E+      P +   NT +D + + G+ E  + L   +   G +PD  +Y+I+++G  K G
Sbjct: 534 EMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAG 593

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
             +   E F  M  +G   D  AY   I G  K G  ++AY+L EEM  KG PP ++TY 
Sbjct: 594 LANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYG 653

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
            ++ GL K+  L+EA  L  +   +G   + + Y+S+I    ++G +     +   +++K
Sbjct: 654 SVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQK 713

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
           GL+P + T+  L+ A      +  A + F  M+     PN ITY+ LINGLCR+R+ ++A
Sbjct: 714 GLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKA 773

Query: 648 YGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +  + +M++ G+ PN  TYT +I+    AGN  EA  L+         PD  +++A++
Sbjct: 774 FVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMI 831



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 151/503 (30%), Positives = 244/503 (48%), Gaps = 1/503 (0%)

Query: 169 SCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR 228
           S  S+   + +L    KK  VE+ L +F +M R+ + P+V   N +I +L   G    A 
Sbjct: 366 SIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAAL 424

Query: 229 EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
           E+   M   G+ P+++T N M+D  CK  +++EA  +   M  + C+PN VT++ LI G 
Sbjct: 425 EIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGL 484

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
            + G ++ A  L   ML  G    A  Y  +I  + + G   +   + +EMV  G +P L
Sbjct: 485 GKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDL 544

Query: 349 ATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDE 408
              N  +  + K G     R  F E+     IPD  SY+ L++G  ++G   E + LF  
Sbjct: 545 TLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYA 604

Query: 409 LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
           ++ +  V     YN +IDG C+ G +  A QL E M  +G  P V+TY  +++G  K+  
Sbjct: 605 MKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDR 664

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
           L  A   F E    G++ +   Y++ I G  K+G   EAY + EE++ KG  P++ T+N 
Sbjct: 665 LDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNC 724

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           L+  L K   + EA    + M      P+ ITY+ +I+    +    +    +  M + G
Sbjct: 725 LLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLG 784

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
           L P  +TYT +I   A  G +  A   FS  +  G  P+  +YNA+I GL    +   AY
Sbjct: 785 LKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAY 844

Query: 649 GLFIDMEEEGILPNKYTYTILIN 671
            LF +   +G   +  T  +L++
Sbjct: 845 ALFEETRLKGCNIHTKTCVVLLD 867



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 134/515 (26%), Positives = 232/515 (45%), Gaps = 39/515 (7%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G  PS      ++ +  K  +++EA +++  M+     P    Y +LI   S   E +  
Sbjct: 155 GFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPM 214

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L   M +LG +V+ H +  +I  ++ +G +  AL+L +EM +  +   +  YN+ I  
Sbjct: 215 LILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDC 274

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
             K G+V  +   F EM    ++PD ++Y +++   C++  + EA  LF++L     VP 
Sbjct: 275 FGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPC 334

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI----------------------- 454
              YNT+I G    G  + A  L E    +G +P VI                       
Sbjct: 335 AYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFE 394

Query: 455 -----------TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
                      TY I+++  C+ G L+ A E  ++M R GL P+       I    K   
Sbjct: 395 EMKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQK 454

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
             EA  + E M  K   P+ +T++ L+ GL K G +++A  L  KM+  G +P  I YTS
Sbjct: 455 LEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTS 514

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           +I +  + G    G  ++  M+  G SP L      +      G  E     F E+   G
Sbjct: 515 LIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHG 574

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
             P+  +Y+ LI+GL +    ++ Y LF  M+E+G + + + Y  +I+  C +G   +A 
Sbjct: 575 FIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAY 634

Query: 684 RLYKEMLDREIEPDYCTHSALL-----LKQLDKDY 713
           +L +EM  +   P   T+ +++     + +LD+ Y
Sbjct: 635 QLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAY 669



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 196/418 (46%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   +E+   +F  M      P+    + +I  L   G    A  +Y  M + G  P  +
Sbjct: 451 KAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAI 510

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
            Y +++ SF K G  ++  ++  EM   GCSP+    N  +    + GE E+ R L R++
Sbjct: 511 VYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREI 570

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
              G    A SY+ +I G  + GL  E   L   M  +G       YN +I G CK G+V
Sbjct: 571 NAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKV 630

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
           + A     EM  K   P +++Y +++ G  +   + EA++LF+E +S  +   VV Y++L
Sbjct: 631 NKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSL 690

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           IDG  + G ++ A  + E ++ +G+ P+V T+  +++   K   ++ A   F  M     
Sbjct: 691 IDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKC 750

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            P++  Y+  I G  ++   ++A+   +EM   G  P+ ITY  ++ GL K G++ EA+ 
Sbjct: 751 PPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASG 810

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
           L  +   +G IPD  +Y ++I              LF     KG +    T  VL+ A
Sbjct: 811 LFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDA 868



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 168/348 (48%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           ++ +M+  G  PD+   N  +  +   G + K R ++R +   G  P   +Y+ ++    
Sbjct: 531 IYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLV 590

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K G   E  EL + M+ +GC  +   YN +I GF ++G++ +A  L+ +M   G   +  
Sbjct: 591 KAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVV 650

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +Y  +I G ++   L EA  L EE  + G+   +  Y+ LI G  K GR+ +A     E+
Sbjct: 651 TYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEEL 710

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           ++K + P++ ++N LL    ++  I EA + F  ++     P  +TY+ LI+GLCR    
Sbjct: 711 MQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKF 770

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
             A    + M   G+ P+ ITYT M++G  K GN+  A   F+     G  PD  +Y   
Sbjct: 771 NKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAM 830

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           I G        +AY L EE   KG      T  VL+  L K   LE+A
Sbjct: 831 IEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQA 878



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 194/453 (42%), Gaps = 36/453 (7%)

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
            YN++L    +  E      +L EM   G  P+      L+    ++ +L +A  +I+ M
Sbjct: 127 AYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTM 186

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
            K   + +  +Y  +I   SE       L L  +M   G    +  +  LI    + GRV
Sbjct: 187 RKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRV 246

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
             A     EM   ++  DI+ YN  +  + ++G +  ++  F E++S  L+P  VTY ++
Sbjct: 247 DAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSM 306

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           I  LC+   L+ A +L E +     +P    Y  M+ G    G                 
Sbjct: 307 IGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKF--------------- 351

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
                                EAY L E   AKG  P +I YN ++  L K   +EEA  
Sbjct: 352 --------------------DEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALR 391

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           +  +M  D  +P+  TY  +I      G L    ++ ++M R GL P ++T  ++I    
Sbjct: 392 IFEEMKRDA-VPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLC 450

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
              +LE A   F  M  K   PN +T+++LI+GL +  R+D AY L+  M + G +P   
Sbjct: 451 KAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAI 510

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
            YT LI      G  ++  ++YKEM+     PD
Sbjct: 511 VYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPD 543



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 98/397 (24%), Positives = 166/397 (41%), Gaps = 54/397 (13%)

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNV----IPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           L+ G+ K  + ++    +F+   K       P+  +YN+LL    R+        + +E+
Sbjct: 94  LVIGVLKRLKDANTAVNYFQWAEKQTEKVHCPE--AYNSLLMVMARNTEFDHLERILEEM 151

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
                 P+      L+    +   L  A  + + M      P    YTI++      G L
Sbjct: 152 SLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILI------GAL 205

Query: 470 SMARE------FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
           S  RE       F++M   G + +   +TT I    + G    A  L +EM +     D+
Sbjct: 206 SEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADI 265

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF-- 581
           + YNV +    K G ++ + +   +M   G +PD +TYTS+I    +   L    +LF  
Sbjct: 266 VLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQ 325

Query: 582 -------------NNML--------------------RKGLSPTLVTYTVLIHAHAARGR 608
                        N M+                     KG  P+++ Y  ++     + R
Sbjct: 326 LEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRR 385

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           +E A   F EM+   + PNV TYN LI+ LCR  +++ A  +  DME  G+ PN  T  I
Sbjct: 386 VEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNI 444

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +I+  C A   +EA  +++ M D+   P+  T S+L+
Sbjct: 445 MIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLI 481


>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
          Length = 754

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 147/489 (30%), Positives = 266/489 (54%), Gaps = 1/489 (0%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G+ P + +YN ++D F KEGE+ +A +L ++M+ +G  PN VTY+ LI G  +  E+++A
Sbjct: 148 GLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKA 207

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             ++R M+  G++ +  +YN +I GYS  G+  E++ + +EM +  + P +   N  +  
Sbjct: 208 ERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTA 267

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           LCK GR+ +AR  F  M+ K   PD+ISY  LL+GY  +G I     LF+ +    +VP 
Sbjct: 268 LCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPD 327

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
              +NTLI+   R G ++ +  + E+M  QG+ PD+IT++ +++  C++G L  A E FN
Sbjct: 328 RHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFN 387

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT-YNVLVHGLCKL 536
            M+  G+ PD   Y+  I G+    D  +A  L  +ML+KG PP  I  +  +++ LCK 
Sbjct: 388 HMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKE 447

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G + E  +++  ++  G  P+ IT+ S++     +G+++    L ++M   G+ P + TY
Sbjct: 448 GRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTY 507

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
             L+  +   GR++ A   F +M  K +    ++YN +++GL + RR   A  +F +M E
Sbjct: 508 NTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIE 567

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVH 716
            G+  + +TY  ++   C      EA  L +++    ++ D  T + ++        +  
Sbjct: 568 SGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQE 627

Query: 717 AVEYLESLT 725
           A E   +++
Sbjct: 628 AKELFAAIS 636



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 159/535 (29%), Positives = 280/535 (52%), Gaps = 1/535 (0%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           +I   ++L+  Y +    +  L VF ++LR GL PDV + N +I      G   KA +++
Sbjct: 117 TIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLF 176

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M E GI P++VTY+++++  CK  EM +A  +L +M G G  PN +TYN LI G+S +
Sbjct: 177 YKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTS 236

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G  +++  + ++M    L     + N  +    + G + EA ++ + MV +G  P + +Y
Sbjct: 237 GMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISY 296

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
             L++G    G ++   + F  M+ + V+PD   +NTL+  Y R G + ++ L+F+++  
Sbjct: 297 GALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTK 356

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           + + P ++T++T+I   CR G L+ A +   +MI+ G+ PD   Y+ ++ G C   +L  
Sbjct: 357 QGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVK 416

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGEL-KLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
           A+E  ++ML KG+ P    + T I   L K G  +E   + + ++  G  P+LIT+N LV
Sbjct: 417 AKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLV 476

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
            G C +G+++EA  LL  M   G  PD  TY +++    + G +     LF +ML K ++
Sbjct: 477 DGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVT 536

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
            T V+Y +++H      R  +A   F EM   G+  ++ TY  ++ GLCR    D+A  L
Sbjct: 537 LTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANML 596

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
              +    +  +  T+ I+I      G  QEA  L+  +    + P   T+  ++
Sbjct: 597 LEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMI 651



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 138/437 (31%), Positives = 238/437 (54%), Gaps = 4/437 (0%)

Query: 262 ALELLWEMQGRGC---SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           A+EL   M    C   +P   TYN+LI  + R    +    +   +L+ GL     SYN 
Sbjct: 99  AVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNA 158

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           +I G+S++G + +A +L  +M  +G+ P + TY+ LI GLCK   +  A     +M+   
Sbjct: 159 LIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAG 218

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
           V P+ ++YN L++GY  SG   E+  +F E+ S  LVP V   N+ +  LC++G ++ A+
Sbjct: 219 VRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEAR 278

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
            + ++M+ +G  PDVI+Y  +++G    G ++     FN M+ +G+ PDR  + T I   
Sbjct: 279 DIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAY 338

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
            +LG   ++  + E+M  +G  PD+IT++ ++   C+LG L++A E    M+  G  PD 
Sbjct: 339 ARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDT 398

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT-YTVLIHAHAARGRLELAFMYFS 617
             Y+ +I       DL + ++L ++ML KG+ P  +  +T +I+     GR+        
Sbjct: 399 AVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVD 458

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
            +   G RPN+IT+N+L++G C +  + +A GL   ME  G+ P+ YTY  L++  C  G
Sbjct: 459 LIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHG 518

Query: 678 NWQEALRLYKEMLDREI 694
              +AL L+++ML + +
Sbjct: 519 RIDDALTLFRDMLHKRV 535



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 140/507 (27%), Positives = 246/507 (48%), Gaps = 1/507 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y+   M ++ + VF +M  + L+PDV NCN  +  L  +G   +AR+++  M   G KP 
Sbjct: 233 YSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPD 292

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +++Y  +L  +   G +     L   M   G  P+   +N LI  ++R G ++++  +  
Sbjct: 293 VISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFE 352

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           DM K G+     +++ +I  +   G L +A+     M+  GV P  A Y+ LI G C   
Sbjct: 353 DMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRR 412

Query: 363 RVSDARHRFFEMLRKNVIPDIISY-NTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
            +  A+    +ML K + P  I +  +++   C+ G + E   + D +      P ++T+
Sbjct: 413 DLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITF 472

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           N+L+DG C  G+++ A  L ++M + G+ PD+ TY  +V+G CK G +  A   F +ML 
Sbjct: 473 NSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLH 532

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
           K +     +Y   + G  +   T  A  +  EM+  G    + TY  ++ GLC+    +E
Sbjct: 533 KRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDE 592

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           AN LL K+       D +T+  +I A  ++G  +  ++LF  +   GL PT++TY V+I 
Sbjct: 593 ANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMIT 652

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
                   E A   FS M+     P+    N +I  L     + +A      ++++GILP
Sbjct: 653 NLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILP 712

Query: 662 NKYTYTILINENCNAGNWQEALRLYKE 688
              T ++LI      G ++E ++L  E
Sbjct: 713 EATTTSLLIYLFSVNGKYREYIKLLPE 739



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 105/335 (31%), Positives = 174/335 (51%)

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           P I +YN L+  Y R+        +F  L    L P V +YN LIDG  + G+++ A  L
Sbjct: 116 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 175

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
              M  QGI+P+V+TY+ ++NG CK   +  A     +M+  G++P+   Y   I G   
Sbjct: 176 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYST 235

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
            G   E+ R+ +EM +    PD+   N  +  LCK G ++EA ++   MV  G  PD I+
Sbjct: 236 SGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVIS 295

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           Y +++H     G +    +LFN M+ +G+ P    +  LI+A+A  G ++ + + F +M 
Sbjct: 296 YGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMT 355

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
            +G+ P++IT++ +I+  CRL R+D A   F  M + G+ P+   Y+ LI   CN  +  
Sbjct: 356 KQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLV 415

Query: 681 EALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKV 715
           +A  L  +ML + I P        ++  L K+ +V
Sbjct: 416 KAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRV 450



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 182/370 (49%), Gaps = 11/370 (2%)

Query: 366 DARHRFFEML-RKNVIPDIISYNTLLYGYCRSGNIG----------EAFLLFDELRSRNL 414
           DARH F E+L R++        N LL    R+              E F   D       
Sbjct: 55  DARHLFDELLLRRDAPAPARGLNELLSALARAPPSAACRDVPALAVELFKRMDRCACPEA 114

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            PT+ TYN LI+   R    ++   +   ++  G+ PDV +Y  +++G  K G +  A +
Sbjct: 115 APTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHD 174

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
            F +M  +G+ P+   Y++ I G  K  +  +A R+  +M+  G  P+ +TYN L+HG  
Sbjct: 175 LFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYS 234

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
             G  +E+  + ++M     +PD     S + A  + G ++  RD+F++M+ KG  P ++
Sbjct: 235 TSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVI 294

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           +Y  L+H +A  G +      F+ M  +G+ P+   +N LIN   RL  +D++  +F DM
Sbjct: 295 SYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDM 354

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYK 714
            ++G+ P+  T++ +I+  C  G   +A+  +  M+D  + PD   +S L+  Q ++   
Sbjct: 355 TKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDL 414

Query: 715 VHAVEYLESL 724
           V A E +  +
Sbjct: 415 VKAKELISDM 424



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 83/177 (46%), Gaps = 2/177 (1%)

Query: 162 LIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDN 221
           +I  G++  VSI     +L    + +  ++  ++  K+    +  D+   N +I+ +   
Sbjct: 565 MIESGMA--VSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKV 622

Query: 222 GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY 281
           G   +A+E++  +  +G+ P+I+TY  M+ +  KE   ++A  L   M+   C+P+    
Sbjct: 623 GRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRIL 682

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
           N +I      GE+ +A   +  + K G+   A + + +I  +S  G   E + L  E
Sbjct: 683 NEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPE 739


>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
 gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
          Length = 826

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 170/601 (28%), Positives = 292/601 (48%), Gaps = 27/601 (4%)

Query: 96  VLNRIREKPRIALRFFRWVETQPGVKR--DEFVFCTILEILIESGLLRSAYWVVETVVCV 153
           V +RIR+ P + L+ F W   +       D F   ++L++L    +      ++ET+ C 
Sbjct: 70  VFDRIRD-PGLGLKLFEWASKRSDFNDLLDGFSCSSLLKLLARCRVFVEVENLLETMKCK 128

Query: 154 NM---HGILDVLIGGGLSSCVSIKILDLLLLIYT-------------------KKSMVEQ 191
           ++      L  ++G  + S +  + L+L  + Y                    ++  VE 
Sbjct: 129 DLAPTREALSFVVGAYVDSGLVNRALELYHIAYDIHNYLPDVIACNALLNALIQQKKVEI 188

Query: 192 CLLVFNKML-RNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTML 250
              V+ +M+ R+G   +   C  +  + ++       + +    G+ G  P+IV YNT++
Sbjct: 189 ARKVYEEMVKRDGCWDNYSVCIMVRGLCKERKVEEGRKLINDRWGK-GCIPNIVFYNTLV 247

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
           D + K G+++ A  L  E++ +G  P   TY ++I G  +    +   GL+ +M + G+ 
Sbjct: 248 DGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVD 307

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
           V+   YN I+    + G  +E       +   G  P + TYN LI G C+ G+V +A   
Sbjct: 308 VNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEEL 367

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
               +++ + P+ +SY  L++ YC+ G    AF LF  +  +     +V Y  L+ GL  
Sbjct: 368 LEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVA 427

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
            G+++VA  +++ M+ +G+LPD   Y +++NG CK G LS A+    EML + L  D F 
Sbjct: 428 AGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFV 487

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
             T + G ++ G   EA +L E  +AKG  P ++ YN ++ G CK G + +A   +++M 
Sbjct: 488 SATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMK 547

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
                PD  TY++II   ++  DL     LF  M+++   P +VTYT LI+     G   
Sbjct: 548 DGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSS 607

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
            A   F EM+  G++PNV+TY  LI   C+  +I +A   F  M     +PN  T+  LI
Sbjct: 608 RAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLI 667

Query: 671 N 671
           N
Sbjct: 668 N 668



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 140/504 (27%), Positives = 244/504 (48%), Gaps = 3/504 (0%)

Query: 204 LLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF-GIKPSIVTYNTMLDSFCKEGEMQEA 262
           L P  +  + ++    D+G   +A E+Y +  +     P ++  N +L++  ++ +++ A
Sbjct: 130 LAPTREALSFVVGAYVDSGLVNRALELYHIAYDIHNYLPDVIACNALLNALIQQKKVEIA 189

Query: 263 LELLWEMQGR-GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC 321
            ++  EM  R GC  N  +  +++ G  +  ++E+ R LI D    G   +   YN ++ 
Sbjct: 190 RKVYEEMVKRDGCWDN-YSVCIMVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVD 248

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           GY ++G +  A  L +E+  +G  PT  TY I+I GLCK            EM  + V  
Sbjct: 249 GYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDV 308

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           ++  YN+++    + G   E       +      P + TYNTLI G CR G +  A++L 
Sbjct: 309 NVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELL 368

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
           E+ I +G+ P+ ++YT +++  CK G    A + F  M  KG   D  AY   + G +  
Sbjct: 369 EHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAA 428

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
           G+   A  ++++M+ +G  PD   YNVL++GLCK G L  A  LL +M+      D    
Sbjct: 429 GEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVS 488

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
            +++   +  G L   + LF   + KG+ P +V Y  +I  +   G +  A      M+ 
Sbjct: 489 ATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKD 548

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
               P+  TY+ +I+G  +   +  A  LF  M ++   PN  TYT LIN  C  G+   
Sbjct: 549 GDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSR 608

Query: 682 ALRLYKEMLDREIEPDYCTHSALL 705
           A + ++EM    ++P+  T++ L+
Sbjct: 609 AEKTFEEMRSSGLKPNVVTYTILI 632



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 137/530 (25%), Positives = 238/530 (44%), Gaps = 48/530 (9%)

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
           +RD G  +K  E      +F       + +++L    +     E   LL  M+ +  +P 
Sbjct: 74  IRDPGLGLKLFEWASKRSDFNDLLDGFSCSSLLKLLARCRVFVEVENLLETMKCKDLAPT 133

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP--IICGYSEKGLLVE---- 331
               + ++  +  +G + +A  L        +    H+Y P  I C      L+ +    
Sbjct: 134 REALSFVVGAYVDSGLVNRALELYH------IAYDIHNYLPDVIACNALLNALIQQKKVE 187

Query: 332 -ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
            A  + EEMV R       +  I++ GLCK  +V + R    +   K  IP+I+ YNTL+
Sbjct: 188 IARKVYEEMVKRDGCWDNYSVCIMVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLV 247

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ----QLKENMIN 446
            GY + G++  A  LF EL+ +  +PT  TY  +I+GLC+  + +       ++KE  ++
Sbjct: 248 DGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVD 307

Query: 447 -------------------------------QGILPDVITYTIMVNGSCKMGNLSMAREF 475
                                           G  PD+ TY  +++GSC+ G +  A E 
Sbjct: 308 VNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEEL 367

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
               +++GL P++ +YT  I    K G    A+ L   M  KG P DL+ Y  LVHGL  
Sbjct: 368 LEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVA 427

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
            G ++ A  +  KMV  G +PD   Y  +++   + G L   + L   ML + LS     
Sbjct: 428 AGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFV 487

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
              L+      G+L+ A   F     KG+ P V+ YNA+I G C+   ++ A      M+
Sbjct: 488 SATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMK 547

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +    P+++TY+ +I+      +   AL+L+ +M+ ++ +P+  T+++L+
Sbjct: 548 DGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLI 597



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 133/524 (25%), Positives = 229/524 (43%), Gaps = 85/524 (16%)

Query: 198 KMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG 257
           +M   G+  +V+  N I+     +G  ++  +  R + E G +P I TYNT++   C++G
Sbjct: 300 EMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDG 359

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
           ++ EA ELL     RG SPN ++Y  LI  + + G+  +A  L   M + G  +   +Y 
Sbjct: 360 KVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYG 419

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            ++ G    G +  AL + ++MV RGV P    YN+L+ GLCK GR+S A+    EML +
Sbjct: 420 ALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQ 479

Query: 378 NVI-----------------------------------PDIISYNTLLYGYCRSGNIGEA 402
           N+                                    P ++ YN ++ GYC+ G + +A
Sbjct: 480 NLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDA 539

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
                 ++  +  P   TY+T+IDG  +  DL  A +L   M+ Q   P+V+TYT ++NG
Sbjct: 540 LTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLING 599

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            C+ G+ S A + F EM   GL+P+   YT  I    K G  S+A    E ML     P+
Sbjct: 600 FCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPN 659

Query: 523 LITYNVLVHGL------------------------------------------------- 533
            +T+N L++GL                                                 
Sbjct: 660 DVTFNYLINGLTNNLATAVSNKANESLEIKASLMMDFFRTMISDGWEQRVAAYNSVLICL 719

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
           C    +  A +L  KM G G  PD +++ ++++     G  +  ++  +  L +      
Sbjct: 720 CHHKMVNAALQLRDKMTGKGIFPDPVSFAALVYGLCLEGRSKEWKNTISCKLNEWELQIA 779

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
           V Y+  ++    +G    A   F  + ++G++ ++   N +++ 
Sbjct: 780 VKYSQKLNPFLPKGLTSEASKVFHTL-LEGVKLHIQENNLIVSA 822



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 197/421 (46%), Gaps = 14/421 (3%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+ +Y K+    +   +F  M   G   D+     ++  L   G    A  V   M E G
Sbjct: 386 LIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERG 445

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           + P    YN +++  CK+G +  A  LL EM  +  S +      L+ GF R+G+L++A+
Sbjct: 446 VLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAK 505

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L    +  G+      YN +I GY + G++ +AL   + M     +P   TY+ +I G 
Sbjct: 506 KLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGY 565

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
            K   + +A   F +M+++   P++++Y +L+ G+CR+G+   A   F+E+RS  L P V
Sbjct: 566 VKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNV 625

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG-----SCKMGN----- 468
           VTY  LI   C+ G +  A    E M+    +P+ +T+  ++NG     +  + N     
Sbjct: 626 VTYTILIGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLINGLTNNLATAVSNKANES 685

Query: 469 ----LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
                S+  +FF  M+  G +    AY + +         + A +L+++M  KG  PD +
Sbjct: 686 LEIKASLMMDFFRTMISDGWEQRVAAYNSVLICLCHHKMVNAALQLRDKMTGKGIFPDPV 745

Query: 525 TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM 584
           ++  LV+GLC  G  +E    +   + +  +   + Y+  ++  L  G       +F+ +
Sbjct: 746 SFAALVYGLCLEGRSKEWKNTISCKLNEWELQIAVKYSQKLNPFLPKGLTSEASKVFHTL 805

Query: 585 L 585
           L
Sbjct: 806 L 806



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 95/357 (26%), Positives = 164/357 (45%), Gaps = 18/357 (5%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           + ++L+    KK  +    L+  +ML   L  D      ++     +G   +A++++ + 
Sbjct: 452 VYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELT 511

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
              G+ P +V YN M+  +CK G M +AL  +  M+    SP+  TY+ +I G+ +  +L
Sbjct: 512 IAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDL 571

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
             A  L   M+K   K +  +Y  +I G+   G    A    EEM + G+ P + TY IL
Sbjct: 572 HNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTIL 631

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG-------------E 401
           I   CK G++S A   F  ML    IP+ +++N L+ G   + N+              +
Sbjct: 632 IGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLINGL--TNNLATAVSNKANESLEIK 689

Query: 402 AFLLFDELR---SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           A L+ D  R   S      V  YN+++  LC +  +  A QL++ M  +GI PD +++  
Sbjct: 690 ASLMMDFFRTMISDGWEQRVAAYNSVLICLCHHKMVNAALQLRDKMTGKGIFPDPVSFAA 749

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML 515
           +V G C  G     +   +  L +        Y+ ++   L  G TSEA ++   +L
Sbjct: 750 LVYGLCLEGRSKEWKNTISCKLNEWELQIAVKYSQKLNPFLPKGLTSEASKVFHTLL 806



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/221 (21%), Positives = 101/221 (45%), Gaps = 1/221 (0%)

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG-DGFIPDHITYTSI 564
           E   L E M  K   P     + +V      G +  A EL         ++PD I   ++
Sbjct: 117 EVENLLETMKCKDLAPTREALSFVVGAYVDSGLVNRALELYHIAYDIHNYLPDVIACNAL 176

Query: 565 IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
           ++A ++   +   R ++  M+++       +  +++       ++E      ++   KG 
Sbjct: 177 LNALIQQKKVEIARKVYEEMVKRDGCWDNYSVCIMVRGLCKERKVEEGRKLINDRWGKGC 236

Query: 625 RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
            PN++ YN L++G  +   +++A GLF +++ +G LP   TY I+IN  C   N++    
Sbjct: 237 IPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDG 296

Query: 685 LYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
           L  EM +R ++ +   +++++  Q+    K+   + L  +T
Sbjct: 297 LLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWIT 337


>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
 gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
          Length = 899

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 187/626 (29%), Positives = 294/626 (46%), Gaps = 29/626 (4%)

Query: 104 PRIALRFFRWVETQPGVKRDEFVFCTILEILI-ESGLLRSAYWVVETVVCV----NMHGI 158
           P  AL FF WV  +PG +        +L++L            VV  V C     +M   
Sbjct: 68  PATALAFFEWVARRPGFRHTAASHAALLQLLARRRAPANYDKLVVSMVSCSDTAEDMREA 127

Query: 159 LDVL-----IGGGL-SSCVSIKILDLL----------LLIY--TKKSMVEQCLLVFNKML 200
           +D +     +GG L  +C  + ++ L+          +LI    +   V + L++   M+
Sbjct: 128 VDAIQAIRRVGGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMV 187

Query: 201 RNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQ 260
           ++G   ++     +IK L   G    AR V   M   G+ PS+ TYN M+D +CK G M+
Sbjct: 188 QDGCSLNLHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMK 247

Query: 261 EALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL-EQARGLIRDMLKLGLKVSAHSYNPI 319
           +AL +   M+  GC+P+  TYN+LI G    GE  ++A  L+ D +  G   +  ++  I
Sbjct: 248 DALGIKALMERNGCNPDDWTYNILIYGLC--GEKPDEAEELLNDAIVRGFTPTVITFTNI 305

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           I GY +   + +AL ++  M++      L  Y +LI  L K  R  +A+    EM    +
Sbjct: 306 INGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGL 365

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
            P+++ Y +++ GYC+ G +G A  +F  +      P   TY++LI GL +   L  A  
Sbjct: 366 APNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMA 425

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           L   M   GI P VITYT ++ G CK      A   F  M + GL PD  AY        
Sbjct: 426 LITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALC 485

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           K G   EAY     ++ KG     +TY  LV G  K G+ + A  L+ KMV +G   D  
Sbjct: 486 KSGRAEEAYSF---LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSY 542

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
           TY+ ++ A  +   L     + + M   G+   +V YT++I      G+ + A   F+EM
Sbjct: 543 TYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEM 602

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
              G +P+  TY   I+  C++ +I++A  L  +ME +G+ P+  TY + IN   + G  
Sbjct: 603 ISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYM 662

Query: 680 QEALRLYKEMLDREIEPDYCTHSALL 705
             A    K M+D   EP+Y T+  LL
Sbjct: 663 DRAFSTLKRMIDASCEPNYWTYWILL 688



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 157/527 (29%), Positives = 258/527 (48%), Gaps = 19/527 (3%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K   ++  L V   ML +    D++    +I VL       +A+E    M   G+ P+
Sbjct: 309 YCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPN 368

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +V Y +++D +CK G++  ALE+   M+  GC PN  TY+ LI G  ++ +L +A  LI 
Sbjct: 369 VVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALIT 428

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M + G+     +Y  +I G  +K     A  L E M   G+ P    YN+L + LCK G
Sbjct: 429 KMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSG 488

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R  +A   +  ++RK V+   ++Y +L+ G+ ++GN   A +L +++ +        TY+
Sbjct: 489 RAEEA---YSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYS 545

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            L+  LC+   L  A  + + M   G+  +++ YTI+++   K G    A+  FNEM+  
Sbjct: 546 VLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISS 605

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G +P    YT  I+   K+G   EA  L  EM   G  PD++TYNV ++G   +G ++ A
Sbjct: 606 GHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRA 665

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMG----------------DLRRGRDLFNNMLR 586
              L++M+     P++ TY  ++   L+M                 +L     L   M++
Sbjct: 666 FSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVK 725

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
            GL+PT VTY+ +I       RLE A + F  M+ K I PN   Y  LI   C ++   +
Sbjct: 726 HGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGK 785

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
           A     DM E G  P+  +Y  LI   C+ G++ +A  L+ ++L  E
Sbjct: 786 AVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDLLGME 832



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 157/542 (28%), Positives = 255/542 (47%), Gaps = 32/542 (5%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR-----EVYRMMGEFGIKPSIVTYNTM 249
           + N  +  G  P V     II     NG+    R      V   M     K  +  Y  +
Sbjct: 286 LLNDAIVRGFTPTVITFTNII-----NGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVL 340

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           ++   K+   +EA E + EM   G +PN V Y  +I G+ + G++  A  + R M   G 
Sbjct: 341 INVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGC 400

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
           + +A +Y+ +I G  +   L +A+ L  +M   G+ P + TY  LI G CK     +A  
Sbjct: 401 RPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNA-F 459

Query: 370 RFFEMLRKN-VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
           R FEM+ +N + PD  +YN L +  C+SG   EA+     L  + +V T VTY +L+DG 
Sbjct: 460 RLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSF---LVRKGVVLTKVTYTSLVDGF 516

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
            + G+ + A  L E M+N+G   D  TY++++   CK   L+ A    ++M   G++ + 
Sbjct: 517 SKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNI 576

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
            AYT  I+  +K G    A  +  EM++ G  P   TY V +   CK+G +EEA  L+ +
Sbjct: 577 VAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGE 636

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL--------- 599
           M  DG  PD +TY   I+    MG + R       M+     P   TY +L         
Sbjct: 637 MERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSL 696

Query: 600 IHAHAARG-------RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
           + AH            L+  +     M   G+ P  +TY+++I G C+  R+++A  LF 
Sbjct: 697 VDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFD 756

Query: 653 DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDK- 711
            M  + I PN+  YT+LI   C+   + +A+    +M++   +P   ++  L++   D+ 
Sbjct: 757 HMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEG 816

Query: 712 DY 713
           DY
Sbjct: 817 DY 818



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 144/438 (32%), Positives = 225/438 (51%), Gaps = 6/438 (1%)

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G+L +A  L+  M  +G + + +SY  +I G  E   + EAL L   MV  G +  L TY
Sbjct: 139 GDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTY 198

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
            +LI GLCK GR+  AR    EM  + V+P + +YN ++ GYC+SG + +A  +   +  
Sbjct: 199 TLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMER 258

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
               P   TYN LI GLC     E A++L  + I +G  P VIT+T ++NG CK   +  
Sbjct: 259 NGCNPDDWTYNILIYGLCGEKPDE-AEELLNDAIVRGFTPTVITFTNIINGYCKAERIDD 317

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A      ML    + D  AY   I   +K     EA     EM A G  P+++ Y  ++ 
Sbjct: 318 ALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIID 377

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           G CK+G +  A E+ R M  +G  P+  TY+S+I+  ++   L +   L   M   G++P
Sbjct: 378 GYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITP 437

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
            ++TYT LI     +   + AF  F  M+  G+ P+   YN L + LC+  R ++AY   
Sbjct: 438 GVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFL 497

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDK 711
           +    +G++  K TYT L++    AGN   A  L ++M++   + D  T+S +LL+ L K
Sbjct: 498 V---RKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYS-VLLQALCK 553

Query: 712 DYKVH-AVEYLESLTLGA 728
             K++ A+  L+ +TL  
Sbjct: 554 QKKLNEALSILDQMTLSG 571



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 105/425 (24%), Positives = 170/425 (40%), Gaps = 71/425 (16%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAY--WVVETVVC--VNMHGILDVL 162
           A R F  +E Q G+  DE  +  +   L +SG    AY   V + VV   V    ++D  
Sbjct: 458 AFRLFEMME-QNGLTPDEQAYNVLTHALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGF 516

Query: 163 IGGGLSSCVSIKI--------------LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDV 208
              G +   ++ I                +LL    K+  + + L + ++M  +G+  ++
Sbjct: 517 SKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNI 576

Query: 209 KNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWE 268
                II  +   G    A+ ++  M   G KPS  TY   + S+CK G+++EA  L+ E
Sbjct: 577 VAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGE 636

Query: 269 MQGRGCSPNGVTYNVLITGFSRNG------------------------------------ 292
           M+  G +P+ VTYNV I G    G                                    
Sbjct: 637 MERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSL 696

Query: 293 ---------------ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
                          EL+    L+  M+K GL  +A +Y+ II G+ +   L EA  L +
Sbjct: 697 VDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFD 756

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
            M  + ++P    Y +LI   C       A     +M+     P + SY+ L+ G C  G
Sbjct: 757 HMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEG 816

Query: 398 NIGEAFLLF-DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
           +  +A  LF D L   +     V +  L DGL + G ++   QL   M N+    D  TY
Sbjct: 817 DYDKAKSLFCDLLGMEDYNHNEVAWKILNDGLLKAGHVDFCSQLLSAMENRHCQIDSETY 876

Query: 457 TIMVN 461
           +++ +
Sbjct: 877 SMVTD 881


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 150/503 (29%), Positives = 271/503 (53%), Gaps = 3/503 (0%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE-VYRMMGEFG-IKPSIVTYN 247
           E   ++ ++M   G +P+  + N +IK L  +  S +A + V RM  E G   P +V++N
Sbjct: 209 EAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFN 268

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
           T++  F K+GE+ +A  L+ EM  +G  P+ VTYN ++    +   +++A  ++R M+  
Sbjct: 269 TVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDK 328

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           G++    +Y  II GYS  G   E+  +  +M ++G+ P + T+N  +  LCK GR  DA
Sbjct: 329 GVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDA 388

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
              F  M  K  +PD++SY+ LL+GY   G   +   LF  +  + +V     +N LI  
Sbjct: 389 EEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISA 448

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
             + G ++ A  +   M  QG+ PDV+TY+ +++  C+MG L+ A E F++M+  GL+P+
Sbjct: 449 HAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPN 508

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP-PDLITYNVLVHGLCKLGSLEEANELL 546
              Y + I G    GD  +A  L  EM++KG P P+++ ++ ++H LC  G + +A+++ 
Sbjct: 509 TVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVF 568

Query: 547 RKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAAR 606
             ++  G  P  +T+ S+I     +G + +   + + M+  G+ P +VTY  L+  +   
Sbjct: 569 NLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKS 628

Query: 607 GRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
           G+++   + F EM  K ++P  +TY+ +++GL    R   A  +F +M + G   +  TY
Sbjct: 629 GKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTY 688

Query: 667 TILINENCNAGNWQEALRLYKEM 689
            IL+   C      EA+ L+ ++
Sbjct: 689 KILLKGLCRNDLTDEAITLFHKL 711



 Score =  272 bits (695), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 152/526 (28%), Positives = 264/526 (50%), Gaps = 39/526 (7%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALE-LLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
           G++   +  NT L   C      EA++ LL  M   GC PN ++YN +I     +   ++
Sbjct: 186 GLRTRTIEANTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQE 245

Query: 297 ARGLIRDMLKLGLKVSAH--SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           A  +++ M K G + S    S+N +I G+ ++G + +A NL  EMV +GV P + TYN +
Sbjct: 246 ALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSI 305

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           +  LCK   +  A     +M+ K V PD ++Y  +++GY  SG+  E+  +F ++ S+ L
Sbjct: 306 VDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGL 365

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
           +P +VT+N+ +  LC++G  + A+++ + M  +G +PD+++Y+I+++G    G  +    
Sbjct: 366 IPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNN 425

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
            F+ M  KG+  +   +   I+   K G   EA  +  EM  +G  PD++TY+ L+   C
Sbjct: 426 LFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFC 485

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS---- 590
           ++G L +A E   +M+  G  P+ + Y S+IH     GDL + ++L + M+ KG+     
Sbjct: 486 RMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNI 545

Query: 591 --------------------------------PTLVTYTVLIHAHAARGRLELAFMYFSE 618
                                           PT+VT+  LI  +   G++E AF     
Sbjct: 546 VFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDA 605

Query: 619 MQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGN 678
           M   GI P+V+TYN L++G C+  +ID    LF +M  + + P   TY+I+++   +AG 
Sbjct: 606 MVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGR 665

Query: 679 WQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
              A +++ EM+D     D  T+  LL      D    A+     L
Sbjct: 666 TSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKL 711



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 150/561 (26%), Positives = 272/561 (48%), Gaps = 43/561 (7%)

Query: 187 SMVEQCLLVFNKMLRNG--LLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           S  ++ L +  +M + G    PDV + N +I      G   KA  +   M + G++P +V
Sbjct: 241 SRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVV 300

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TYN+++D+ CK   M +A  +L +M  +G  P+G+TY  +I G+S +G  +++  + R M
Sbjct: 301 TYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKM 360

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
              GL     ++N  +    + G   +A  + + M T+G  P L +Y+IL++G    GR 
Sbjct: 361 TSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRF 420

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
           +D  + F  M  K ++ +   +N L+  + + G + EA L+F E++ + + P VVTY+TL
Sbjct: 421 ADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTL 480

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           I   CR G L  A +    MI+ G+ P+ + Y  +++G C  G+L  A+E  +EM+ KG+
Sbjct: 481 ISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGI 540

Query: 485 ------------------------------------QPDRFAYTTQIAGELKLGDTSEAY 508
                                               +P    + + I G   +G   +A+
Sbjct: 541 PRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAF 600

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
            + + M++ G  PD++TYN LV G CK G +++   L R+M+     P  +TY+ ++   
Sbjct: 601 GVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGL 660

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
              G     + +F+ M+  G +  + TY +L+         + A   F ++     + ++
Sbjct: 661 FHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDI 720

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
              N +IN L ++RR ++A  LF  +   G++PN  TY ++I+     G+ +EA  ++  
Sbjct: 721 TILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSS 780

Query: 689 MLDREIEPDYCTHSALLLKQL 709
           M     E   C  S+ LL  +
Sbjct: 781 M-----EKSGCAPSSRLLNDI 796



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 155/538 (28%), Positives = 267/538 (49%), Gaps = 38/538 (7%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   +++  LV  +M+  G+ PD      II     +G   ++ +++R M   G+ P IV
Sbjct: 311 KARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIV 370

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           T+N+ + S CK G  ++A E+   M  +G  P+ V+Y++L+ G++  G       L   M
Sbjct: 371 TFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSM 430

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
              G+  + H +N +I  ++++G++ EA+ +  EM  +GV P + TY+ LI   C+ GR+
Sbjct: 431 ADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRL 490

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR------------ 412
           +DA  +F +M+   + P+ + Y++L++G+C  G++ +A  L  E+ S+            
Sbjct: 491 ADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSS 550

Query: 413 ------------------NLV------PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
                             NLV      PT+VT+N+LIDG C  G +E A  + + M++ G
Sbjct: 551 IIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVG 610

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
           I PDV+TY  +V+G CK G +      F EML K ++P    Y+  + G    G TS A 
Sbjct: 611 IEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAK 670

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
           ++  EM+  G   D+ TY +L+ GLC+    +EA  L  K+       D     ++I+A 
Sbjct: 671 KMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINAL 730

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
            ++       DLF  +   GL P + TY V+IH     G +E A   FS M+  G  P+ 
Sbjct: 731 YKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSS 790

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILP-NKYTYTILINENCNAGNWQEALRL 685
              N +I  L +   I +A G ++   +  I+     T ++L++   + G  +E ++ 
Sbjct: 791 RLLNDIIRMLLQKGDIVKA-GYYMSKVDGTIISLEASTTSLLMSLFSSKGKHREQIKF 847



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 116/390 (29%), Positives = 186/390 (47%), Gaps = 39/390 (10%)

Query: 344 VAP-TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           VAP ++ TY IL+   C+  R       F  +LR  +    I  NT L   C +    EA
Sbjct: 151 VAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEA 210

Query: 403 F-LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG--ILPDVITYTIM 459
             +L   +     VP  ++YNT+I  LC     + A  + + M  +G    PDV+++  +
Sbjct: 211 VDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTV 270

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           ++G  K G +S A    NEM++KG++PD   Y + +    K     +A  +  +M+ KG 
Sbjct: 271 IHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGV 330

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
            PD +TY  ++HG    G  +E+ ++ RKM   G IP  +T+ S + +  + G  +   +
Sbjct: 331 EPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEE 390

Query: 580 LFNNMLRKGLSPTLVTYTVLIH-----------------------------------AHA 604
           +F  M  KG  P LV+Y++L+H                                   AHA
Sbjct: 391 IFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHA 450

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
            RG ++ A + F+EMQ +G+RP+V+TY+ LI+  CR+ R+  A   F  M   G+ PN  
Sbjct: 451 KRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTV 510

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREI 694
            Y  LI+  C  G+  +A  L  EM+ + I
Sbjct: 511 VYHSLIHGFCMHGDLVKAKELVSEMMSKGI 540



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/368 (28%), Positives = 178/368 (48%), Gaps = 36/368 (9%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
            ++L+  + K+ M+++ +LVF +M   G+ PDV   + +I      G    A E +  M 
Sbjct: 442 FNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMI 501

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG----------------CS---- 275
             G++P+ V Y++++  FC  G++ +A EL+ EM  +G                C+    
Sbjct: 502 SIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRV 561

Query: 276 ----------------PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI 319
                           P  VT+N LI G+   G++E+A G++  M+ +G++    +YN +
Sbjct: 562 MDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTL 621

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           + GY + G + + L L  EM+ + V PT  TY+I++ GL   GR S A+  F EM+    
Sbjct: 622 VSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGT 681

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
             DI +Y  LL G CR+    EA  LF +L + +    +   NT+I+ L +    E A  
Sbjct: 682 AVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEAND 741

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           L   +   G++P+V TY +M++   K G++  A   F+ M + G  P        I   L
Sbjct: 742 LFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLL 801

Query: 500 KLGDTSEA 507
           + GD  +A
Sbjct: 802 QKGDIVKA 809



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/159 (20%), Positives = 75/159 (47%)

Query: 169 SCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR 228
           + V I    +LL    +  + ++ + +F+K+       D+   N +I  L       +A 
Sbjct: 681 TAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEAN 740

Query: 229 EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
           +++  +   G+ P++ TY  M+ +  KEG ++EA  +   M+  GC+P+    N +I   
Sbjct: 741 DLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRML 800

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKG 327
            + G++ +A   +  +    + + A + + ++  +S KG
Sbjct: 801 LQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKG 839


>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 175/618 (28%), Positives = 308/618 (49%), Gaps = 18/618 (2%)

Query: 90  PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVET 149
           P+ ++++L +  + P  AL  F  V   PG     +VF  IL+ L +  L+     +VE 
Sbjct: 10  PKRVIKLL-KSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVEL 68

Query: 150 VVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLR-NGLLPDV 208
           +         DV +               ++  Y K SM +Q L +F +M    G  P +
Sbjct: 69  IRTQKCKCPEDVAL--------------TVIKAYAKNSMPDQALDIFQRMHEIFGCQPGI 114

Query: 209 KNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWE 268
           ++ N ++  L ++    +A   +      G+ P++ TYN ++   C++ +  +A ELL  
Sbjct: 115 RSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNW 174

Query: 269 MQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
           M  +G SP+  +Y  LI   ++NG +  A  L  +M + G+      YN +I G+ +KG 
Sbjct: 175 MWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGD 234

Query: 329 LVEALNLEEEMVT-RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYN 387
           ++ A  + E ++    V P + +YN++I GLCK G+  ++   +  M +     D+ +Y+
Sbjct: 235 ILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYS 294

Query: 388 TLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
           TL++G C SGN+  A  ++ E+    + P VV YNT+++G  R G +E   +L + M  +
Sbjct: 295 TLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKE 354

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
           G    V++Y I++ G  +   +  A   +  +  K    D   Y   + G  K G  ++A
Sbjct: 355 GCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKA 413

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
             + EE        D   Y+ +++GLC+ G L+E   +L +M   G  P+     ++I+ 
Sbjct: 414 LSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVING 473

Query: 568 SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
            +    L      F NM+ KG  PT+VTY  LI+  +   R   A+    EM  KG +PN
Sbjct: 474 FVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPN 533

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYK 687
           +ITY+ L+NGLC+ +++D A  L+    E+G  P+   + I+I+  C++G  ++AL+LY 
Sbjct: 534 MITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYS 593

Query: 688 EMLDREIEPDYCTHSALL 705
           EM  R+  P+  TH+ L+
Sbjct: 594 EMKQRKCVPNLVTHNTLM 611



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 132/535 (24%), Positives = 253/535 (47%), Gaps = 25/535 (4%)

Query: 58  YKELIISTVEEKPWAFCNNRWVSDHFQAVVSDPEL-----LVRVLNRIREKPRIALRFFR 112
           Y  L+ + +E   W    + ++  +F+ +   P L     L+++  R ++  + A     
Sbjct: 117 YNSLLNALIESNKWDEAESFFL--YFETMGLSPNLQTYNILIKISCRKKQFDK-AKELLN 173

Query: 113 WVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVS 172
           W+  Q G   D F + T++  L ++G +  A              + D +   G++    
Sbjct: 174 WMWEQ-GFSPDVFSYGTLINSLAKNGYMSDAL------------KLFDEMPERGVTP--D 218

Query: 173 IKILDLLLLIYTKKSMVEQCLLVFNKMLRN-GLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           +   ++L+  + KK  +     ++ ++L+   + P++ + N +I  L   G   ++ E++
Sbjct: 219 VACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIW 278

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M +      + TY+T++   C  G +  A  +  EM   G SP+ V YN ++ G+ R 
Sbjct: 279 HRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRA 338

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G +E+   L + M K G +    SYN +I G  E   + EA+++ E +  +       TY
Sbjct: 339 GRIEECLELWKVMEKEGCRTVV-SYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTY 397

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
            +L++GLCK G ++ A     E        D  +Y++++ G CR G + E   + D++  
Sbjct: 398 GVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTK 457

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
               P     N +I+G  R   LE A +   NM+++G  P V+TY  ++NG  K    S 
Sbjct: 458 HGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSE 517

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A     EML KG +P+   Y+  + G  +      A  L  + L KGF PD+  +N+++H
Sbjct: 518 AYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIH 577

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           GLC  G +E+A +L  +M     +P+ +T+ +++    ++ D  R   +++++L+
Sbjct: 578 GLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQ 632



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 85/174 (48%), Gaps = 4/174 (2%)

Query: 556 PDHITYTSI-IHASLEMGDLRRGRDLFNNMLRK-GLSPTLVTYTVLIHAHAARGRLELAF 613
           P+ +  T I  +A   M D  +  D+F  M    G  P + +Y  L++A     + + A 
Sbjct: 77  PEDVALTVIKAYAKNSMPD--QALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAE 134

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
            +F   +  G+ PN+ TYN LI   CR ++ D+A  L   M E+G  P+ ++Y  LIN  
Sbjct: 135 SFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSL 194

Query: 674 CNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLG 727
              G   +AL+L+ EM +R + PD   ++ L+     K   ++A E  E L  G
Sbjct: 195 AKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKG 248


>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Glycine max]
          Length = 836

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 177/603 (29%), Positives = 289/603 (47%), Gaps = 75/603 (12%)

Query: 176 LDLLLLIYTK--KSMVEQCLL-VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR 232
           LDLLL I     K +  +C   +F    + G+ P +K CN ++  L       K+ EV+ 
Sbjct: 186 LDLLLHILCSQFKCLGSRCAFDIFVMFSKRGVFPCLKTCNLLLSSLVKANELHKSYEVFD 245

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
           +  + G+ P + T+ T +++FCK G + +A++L  +M+G G  PN VTYN +I G  ++G
Sbjct: 246 LACQ-GVAPDVFTFTTAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSG 304

Query: 293 ELEQA-----------------------RGLIR------------DMLKLGLKVSAHSYN 317
             E+A                        GL++            +M  +G   +   +N
Sbjct: 305 RFEEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFN 364

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            +I GY  KG + EAL + +EM  +G+ P   T+N L+ G C+  ++  A      +L  
Sbjct: 365 ALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSS 424

Query: 378 --NVIPDIISY---------------------------------NTLLYGYCRSGNIGEA 402
             +V  D+ SY                                   L+ G C+     EA
Sbjct: 425 GLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEA 484

Query: 403 FLLFDELRS-RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
             L+ +L + + L    VT N L+ GLC  G++E   ++ + M+ +G+L D I+Y  ++ 
Sbjct: 485 IELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIF 544

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
           G CK G +  A +   EM+++  QPD + Y   + G   +G   + +RL  E    GF P
Sbjct: 545 GCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVP 604

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           ++ TY +L+ G CK   +E+A +  + +  +      + Y  +I A   +G++     L 
Sbjct: 605 NVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLR 664

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
           + M  +G+ PT  TY+ LIH     GR++ A   F EM+ +G+ PNV  Y ALI G C+L
Sbjct: 665 DAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKL 724

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
            ++D    + ++M   GI PNK TYTI+I+  C  GN +EA  L  EM+   I PD  T+
Sbjct: 725 GQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPDTVTY 784

Query: 702 SAL 704
           +AL
Sbjct: 785 NAL 787



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 148/491 (30%), Positives = 250/491 (50%), Gaps = 1/491 (0%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K    E+ L   ++M+R+ + P V     +I  L       +A EV   M   G  P+ V
Sbjct: 302 KSGRFEEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEV 361

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
            +N ++D +C++G+M EAL +  EM  +G  PN VT+N L+ GF R+ ++EQA  ++  +
Sbjct: 362 VFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYI 421

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           L  GL V+    + +I    E+   V AL +  ++++  +  + +    L+ GLCK    
Sbjct: 422 LSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGH 481

Query: 365 SDARHRFFEMLR-KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           S+A   +F++   K +  + ++ N LL+G C  GN+ E F +  ++  + L+   ++YNT
Sbjct: 482 SEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNT 541

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           LI G C++G +E A +LKE M+ Q   PD  TY  ++ G   MG +       +E    G
Sbjct: 542 LIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYG 601

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
             P+ + Y   + G  K     +A +  + +  +      + YN+L+   C++G++ EA 
Sbjct: 602 FVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAF 661

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
           +L   M   G +P   TY+S+IH    +G +   +++F  M  +GL P +  YT LI  H
Sbjct: 662 KLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGH 721

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
              G++++      EM   GIRPN ITY  +I+G C+L  + +A  L  +M   GI P+ 
Sbjct: 722 CKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPDT 781

Query: 664 YTYTILINENC 674
            TY  L    C
Sbjct: 782 VTYNALQKGYC 792



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 115/353 (32%), Positives = 190/353 (53%)

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
           ++ + +  G S      +++    G+  + VT N +L   C+ G M+E  E+L +M  +G
Sbjct: 472 VVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKG 531

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
              + ++YN LI G  + G++E+A  L  +M++   +   ++YN ++ G ++ G + +  
Sbjct: 532 LLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVH 591

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
            L  E    G  P + TY +L+ G CK  R+ DA   F  +  + V    + YN L+  Y
Sbjct: 592 RLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAY 651

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
           CR GN+ EAF L D ++SR ++PT  TY++LI G+C  G ++ A+++ E M N+G+LP+V
Sbjct: 652 CRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNV 711

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
             YT ++ G CK+G + +      EM   G++P++  YT  I G  KLG+  EA  L  E
Sbjct: 712 FCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNE 771

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
           M+  G  PD +TYN L  G CK   L    +   K      + + ITY ++IH
Sbjct: 772 MIRNGIAPDTVTYNALQKGYCKERELTVTLQSDHKSNIGLPLEEEITYNTLIH 824



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 113/379 (29%), Positives = 199/379 (52%), Gaps = 6/379 (1%)

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
           RGV P L T N+L+  L K   +  + +  F++  + V PD+ ++ T +  +C+ G +G+
Sbjct: 215 RGVFPCLKTCNLLLSSLVKANELHKS-YEVFDLACQGVAPDVFTFTTAINAFCKGGRVGD 273

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           A  LF ++    + P VVTYN +IDGL + G  E A + K+ M+   + P V+TY ++++
Sbjct: 274 AVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLIS 333

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
           G  K+     A E   EM   G  P+   +   I G  + GD  EA R+++EM  KG  P
Sbjct: 334 GLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKP 393

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           + +T+N L+ G C+   +E+A ++L  ++  G   +    + +IH  +E         + 
Sbjct: 394 NFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIV 453

Query: 582 NNMLRKGL--SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
             +L   +  S +L+T  +++      G  E   ++F    VKG+  N +T NAL++GLC
Sbjct: 454 TKLLSGNIRVSDSLLT-PLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLC 512

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
               +++ + +   M E+G+L ++ +Y  LI   C  G  +EA +L +EM+ +E +PD  
Sbjct: 513 ERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTY 572

Query: 700 THSALL--LKQLDKDYKVH 716
           T++ L+  L  + K   VH
Sbjct: 573 TYNFLMKGLADMGKIDDVH 591



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 105/215 (48%)

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           ++  +G  PD+ T+   ++  CK G + +A +L  KM G G  P+ +TY ++I    + G
Sbjct: 245 DLACQGVAPDVFTFTTAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSG 304

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
                    + M+R  ++P++VTY VLI         E A     EM   G  PN + +N
Sbjct: 305 RFEEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFN 364

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
           ALI+G CR   + +A  +  +M  +G+ PN  T+  L+   C +   ++A ++   +L  
Sbjct: 365 ALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSS 424

Query: 693 EIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLG 727
            +  +    S ++ + +++   V A++ +  L  G
Sbjct: 425 GLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSG 459


>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Glycine max]
          Length = 827

 Score =  272 bits (696), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 180/653 (27%), Positives = 311/653 (47%), Gaps = 54/653 (8%)

Query: 101 REKPRIALRFFRWVETQPGVKRDEFVFCTILEILI-------ESGLLRSAYWVVETVVCV 153
           +  PR ALRFF+ VET+ G  +   V C +L+IL        ++  L + Y   ++    
Sbjct: 72  KADPRSALRFFKQVETKGGFAKTADVLCLLLQILASNPETHGDAKHLLNKYVFGDSAPAA 131

Query: 154 NMHGILDVLI------GGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPD 207
            +  ++++L+      G  LS     ++ + LL+ Y + + + + +  F  ML +G++P 
Sbjct: 132 KV--LVELLVECAERYGFKLSDS---RVFNYLLISYVRANKITEAVECFRAMLEDGVVPW 186

Query: 208 VKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLW 267
           V   N ++  +        A  ++  M E  I     T   ++ +  K G+  EA     
Sbjct: 187 VPFVNVLLTAMIRRNMVEDAHRLFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFG 246

Query: 268 EMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII--C---- 321
           +  GRG   +  +Y+++I    R  +L+ A  L+    +LG   S  +Y  +I  C    
Sbjct: 247 QAAGRGLKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLG 306

Query: 322 -----------------------------GYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
                                        GY  +G +  AL L +E+V  GV P +A ++
Sbjct: 307 NFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFS 366

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
           +LI    K G V  A   +  M    + P +   N LL G+ +   +  A+LL D     
Sbjct: 367 VLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDG-AVE 425

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
           N + +VVTYN ++  LC  G +  A  L + MI +GI P +++Y  M+ G CK G +  A
Sbjct: 426 NGIASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDA 485

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
            E  N ++  GL+P+   YT  + G  K GD   A+ + ++M+A G  P   T+N +++G
Sbjct: 486 HEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIING 545

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           LCK+G + EA + L   +   FIP  +TY  II   ++ G +     ++  M R  +SP 
Sbjct: 546 LCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPN 605

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
           ++TYT LI+      +++LA     +M+ KG+  ++  Y  LI G C+++ ++ A   F 
Sbjct: 606 VITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFS 665

Query: 653 DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            + E G+ PN   Y I+I+   N  N + AL L+KEM++ +I  D   +++L+
Sbjct: 666 KLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLI 718



 Score =  263 bits (672), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 147/474 (31%), Positives = 245/474 (51%), Gaps = 1/474 (0%)

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
           E G+ P++  ++ +++   K G +++A EL   M+  G  P     N L+ GF +   LE
Sbjct: 355 EVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLE 414

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
            A  L+   ++ G+  S  +YN ++    E G + EA NL ++M+ +G+ P+L +YN +I
Sbjct: 415 NAYLLLDGAVENGI-ASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMI 473

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
            G CK G + DA      ++   + P+ I+Y  L+ G  + G+   AF +FD++ +  +V
Sbjct: 474 LGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIV 533

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           PT  T+N++I+GLC+ G +  A+      I Q  +P  +TY  +++G  K G +  A   
Sbjct: 534 PTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESV 593

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
           + EM R  + P+   YT+ I G  K      A ++ ++M  KG   D+  Y  L+ G CK
Sbjct: 594 YREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCK 653

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
           +  +E A +   K++  G  P+ I Y  +I A   + ++    +L   M+   +   L  
Sbjct: 654 MQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKI 713

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           YT LI      G+L  A   +SEM  +GI P++  YN LINGLC   +++ A  +  +M+
Sbjct: 714 YTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMD 773

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQL 709
              I P    Y  LI  +   GN QEA RL+ EMLD+ + PD  T+  L+  +L
Sbjct: 774 GNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKL 827



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 149/466 (31%), Positives = 250/466 (53%), Gaps = 1/466 (0%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           ++ I  +L+   +K   VE+   ++ +M   GL P V   N ++K  R       A  + 
Sbjct: 361 NVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLL 420

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
               E GI  S+VTYN +L   C+ G++ EA  L  +M G+G +P+ V+YN +I G  + 
Sbjct: 421 DGAVENGIA-SVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKK 479

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G ++ A  ++  +++ GLK +A +Y  ++ G  +KG    A N+ ++MV  G+ PT  T+
Sbjct: 480 GCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTF 539

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           N +I GLCK GRVS+AR +    ++++ IP  ++YN ++ GY + G I  A  ++ E+  
Sbjct: 540 NSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCR 599

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
             + P V+TY +LI+G C+   +++A ++ ++M  +G+  D+  Y  ++ G CKM ++  
Sbjct: 600 SEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMEN 659

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A +FF+++L  GL P+   Y   I+    L +   A  L +EM+    P DL  Y  L+ 
Sbjct: 660 ACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLID 719

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           GL K G L  A +L  +M+  G +PD   Y  +I+     G L     +   M    ++P
Sbjct: 720 GLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITP 779

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
           T++ Y  LI  H   G L+ AF    EM  KG+ P+  TY+ L+NG
Sbjct: 780 TVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 825



 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 155/505 (30%), Positives = 264/505 (52%), Gaps = 9/505 (1%)

Query: 171 VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV 230
           V++ +   L+  Y  +  V   L +F++++  G+ P+V   + +I+     G   KA E+
Sbjct: 325 VNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANEL 384

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNG----VTYNVLIT 286
           Y  M   G++P++   N +L  F K+  ++ A  LL      G   NG    VTYN+++ 
Sbjct: 385 YTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLL-----DGAVENGIASVVTYNIVLL 439

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
                G++ +A  L   M+  G+  S  SYN +I G+ +KG + +A  +   ++  G+ P
Sbjct: 440 WLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKP 499

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
              TY IL+ G  K G    A + F +M+   ++P   ++N+++ G C+ G + EA    
Sbjct: 500 NAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKL 559

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
           +    ++ +PT +TYN +IDG  + G ++ A+ +   M    I P+VITYT ++NG CK 
Sbjct: 560 NTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKS 619

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
             + +A +  ++M RKGL+ D   Y T IAG  K+ D   A +   ++L  G  P+ I Y
Sbjct: 620 NKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVY 679

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           N+++     L ++E A  L ++M+ +    D   YTS+I   L+ G L    DL++ ML 
Sbjct: 680 NIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLC 739

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
           +G+ P +  Y VLI+     G+LE A     EM    I P V+ YN LI G  +   + +
Sbjct: 740 RGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQE 799

Query: 647 AYGLFIDMEEEGILPNKYTYTILIN 671
           A+ L  +M ++G++P+  TY IL+N
Sbjct: 800 AFRLHDEMLDKGLVPDDTTYDILVN 824



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 125/416 (30%), Positives = 210/416 (50%), Gaps = 3/416 (0%)

Query: 154 NMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNR 213
           N + +LD  +  G++S V+  I+   LL   +   V +   +++KM+  G+ P + + N 
Sbjct: 415 NAYLLLDGAVENGIASVVTYNIV---LLWLCELGKVNEACNLWDKMIGKGITPSLVSYNH 471

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
           +I      G    A EV   + E G+KP+ +TY  +++   K+G+ + A  +  +M   G
Sbjct: 472 MILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAG 531

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
             P   T+N +I G  + G + +AR  +   +K     ++ +YN II GY ++G +  A 
Sbjct: 532 IVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAE 591

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
           ++  EM    ++P + TY  LI G CK  ++  A     +M RK +  DI  Y TL+ G+
Sbjct: 592 SVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGF 651

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
           C+  ++  A   F +L    L P  + YN +I       ++E A  L + MIN  I  D+
Sbjct: 652 CKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDL 711

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
             YT +++G  K G LS A + ++EML +G+ PD F Y   I G    G    A ++ +E
Sbjct: 712 KIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKE 771

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           M      P ++ YN L+ G  K G+L+EA  L  +M+  G +PD  TY  +++  L
Sbjct: 772 MDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKL 827



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 89/374 (23%), Positives = 171/374 (45%), Gaps = 1/374 (0%)

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           +N L+    +  ++++A   F  ML   V+P +   N LL    R   + +A  LFDE+ 
Sbjct: 155 FNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEMA 214

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
            R +     T   L+    + G    A++       +G+  D  +Y+I++   C+  +L 
Sbjct: 215 ERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLD 274

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
           +A +        G  P    Y   I   ++LG+  EA RL++EM+    P ++     L+
Sbjct: 275 LASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLI 334

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
            G C  G +  A  L  ++V  G  P+   ++ +I    ++G++ +  +L+  M   GL 
Sbjct: 335 KGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQ 394

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           PT+     L+     +  LE A++        GI  +V+TYN ++  LC L ++++A  L
Sbjct: 395 PTVFILNFLLKGFRKQNLLENAYLLLDGAVENGI-ASVVTYNIVLLWLCELGKVNEACNL 453

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLD 710
           +  M  +GI P+  +Y  +I  +C  G   +A  +   +++  ++P+  T++ L+     
Sbjct: 454 WDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFK 513

Query: 711 KDYKVHAVEYLESL 724
           K    HA    + +
Sbjct: 514 KGDCEHAFNMFDQM 527


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  272 bits (696), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 158/499 (31%), Positives = 265/499 (53%), Gaps = 1/499 (0%)

Query: 195 VFNKML-RNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
           +FN++L +N  +P      +I+  L        A  + + M   GIKP  +T N +++ F
Sbjct: 44  LFNRLLHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCF 103

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
            + G ++ +  +  ++  +G  P+ VT+ +LI G    GE+ +A      ++  G ++  
Sbjct: 104 SQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQ 163

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
            SY  +I G    G    A+ L   +  + V P +  Y+ +I  +CK   V+DA   + E
Sbjct: 164 VSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCE 223

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M+ K + PD+++Y++L+ G+C  G +  A  LF+ + S N+ P V T++ LIDG C+ G 
Sbjct: 224 MVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGK 283

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           +  A+ +   M+ + +  DV+TY  +++G C +  ++ A+  FN M ++G+ PD ++Y+ 
Sbjct: 284 VREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSI 343

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            I G  K+    EA +L EEM  K   P+++TYN LV GLCK G    A EL+ +M   G
Sbjct: 344 MINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRG 403

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
              + ITY SI+ A  +   + +   L   +  KG+ P + TYTVLI+     GRL+ A 
Sbjct: 404 QPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQ 463

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
             F ++ VKG  PN+ TY +LING C     D+   +   M++ G +PN  TY ILI+  
Sbjct: 464 KVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSL 523

Query: 674 CNAGNWQEALRLYKEMLDR 692
                  +A +L +EM+ R
Sbjct: 524 FEKDENDKAEKLLREMIAR 542



 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 143/472 (30%), Positives = 253/472 (53%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P  + +  +L S  K  + Q AL L  +M+  G  P+ +T N+L+  FS+ G ++ +  +
Sbjct: 56  PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSV 115

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
              +LK G    A ++  +I G   KG + +AL   +++V +G      +Y  LI GLC+
Sbjct: 116 FAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCR 175

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G    A      +  K V P+++ Y+T++   C+   + +AF L+ E+ S+ + P VVT
Sbjct: 176 VGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVT 235

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y++LI G C  G L+ A  L   MI+  I P+V T++I+++G CK G +  A+     M+
Sbjct: 236 YSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMM 295

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           +K ++ D   Y + + G   +   ++A  L   M  +G  PD+ +Y+++++G CK+  ++
Sbjct: 296 KKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVD 355

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA +L  +M      P+ +TY S++    + G      +L + M  +G    ++TY  ++
Sbjct: 356 EAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSIL 415

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
            A      ++ A +  ++++ KGI+P++ TY  LINGLC++ R+D A  +F D+  +G  
Sbjct: 416 DAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYS 475

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
           PN YTYT LIN  CN G + E L +  +M D    P+  T+  L+    +KD
Sbjct: 476 PNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKD 527



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 155/487 (31%), Positives = 255/487 (52%), Gaps = 4/487 (0%)

Query: 174 KILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRM 233
           KIL  LL    K    +  L +  +M  NG+ PD   CN ++      G    +  V+  
Sbjct: 63  KILGSLL----KAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAK 118

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           + + G  P  VT+  ++   C +GE+ +AL    ++  +G   + V+Y  LI G  R GE
Sbjct: 119 ILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGE 178

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
            + A  L+R +    ++ +   Y+ II    +  L+ +A +L  EMV++ ++P + TY+ 
Sbjct: 179 TKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSS 238

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           LI G C  G++  A   F  M+  N+ P++ +++ L+ G+C+ G + EA  +   +  +N
Sbjct: 239 LISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKN 298

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           +   VVTYN+L+DG C    +  A+ L   M  +G+ PDV +Y+IM+NG CK+  +  A 
Sbjct: 299 VKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAM 358

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
           + F EM  K + P+   Y + + G  K G TS A  L +EM  +G P ++ITYN ++  +
Sbjct: 359 KLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAI 418

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
           CK   +++A  LL K+   G  PD  TYT +I+   ++G L   + +F ++L KG SP +
Sbjct: 419 CKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNI 478

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
            TYT LI+    +G  +      S+M+  G  PN ITY  LI+ L      D+A  L  +
Sbjct: 479 YTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLRE 538

Query: 654 MEEEGIL 660
           M   G+L
Sbjct: 539 MIARGLL 545



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 184/330 (55%)

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
           + N IP  I +  +L    ++     A  L  ++    + P  +T N L++   + G ++
Sbjct: 51  KNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIK 110

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            +  +   ++ +G  PD +T+TI++ G C  G +  A  F ++++ +G Q D+ +Y T I
Sbjct: 111 FSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLI 170

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
            G  ++G+T  A +L   +  K   P+++ Y+ ++  +CK   + +A +L  +MV     
Sbjct: 171 NGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRIS 230

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           PD +TY+S+I     +G L+   DLFN M+   ++P + T+++LI      G++  A   
Sbjct: 231 PDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNV 290

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
            + M  K ++ +V+TYN+L++G C ++++++A  LF  M + G+ P+ ++Y+I+IN  C 
Sbjct: 291 LAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCK 350

Query: 676 AGNWQEALRLYKEMLDREIEPDYCTHSALL 705
                EA++L++EM  ++I P+  T+++L+
Sbjct: 351 IKMVDEAMKLFEEMHCKQIFPNVVTYNSLV 380


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  272 bits (696), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 194/655 (29%), Positives = 311/655 (47%), Gaps = 65/655 (9%)

Query: 90  PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVET 149
           P  L+  L R  E     +  F W   QP  K    +F  +L  L ++G   +       
Sbjct: 56  PTQLLHSLRR-EEDSSAVIHLFYWASKQPNFKPSSSIFKEVLHKLGKAGEFDA------- 107

Query: 150 VVCVNMHGILDVLIGGGLSSCVSIKILD---LLLLI--YTKKSMVEQCLLVFNKM-LRNG 203
                M  IL  +        +S+ ++D   LL+ I  Y    +  + L   + M +  G
Sbjct: 108 -----MKDILKEMK-------ISLSVIDNDSLLVFIESYASFGLYNEILQFVDAMEVEFG 155

Query: 204 LLPDVKNCNRIIKVLRDNGFSVKAREV-YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           ++ +    N ++ VL D G  +K  E+ +  M   GI+P + T+N ++ + C+  +++ A
Sbjct: 156 VVANTHFYNFLLNVLVD-GNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPA 214

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
           + L+ EM+  G  P+  T+  ++ GF   G L+ A  +   M++ G  V+  + N ++ G
Sbjct: 215 ILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNG 274

Query: 323 YSEKGLLVEALNLEEEMVTR-GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           + ++G + EAL   EEM  R G  P   T+N+L+ GL K G V  A      MLR+   P
Sbjct: 275 FCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDP 334

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           DI +YN+L+ G C+ G + EA  + +++  R+  P  VTYNT+I  LC+   +E A +L 
Sbjct: 335 DIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLA 394

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT--------- 492
             +  +GILPDV TY  ++ G C   N ++A E + EM  KG  PD F Y          
Sbjct: 395 LVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFR 454

Query: 493 --------------------------TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
                                     T I G  K    +EA  + ++M  +G   + +TY
Sbjct: 455 GKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTY 514

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           N L+ GLCK   +EEA++L+ +M+ +G  PD  TY S++    + GD+++  D+   M  
Sbjct: 515 NTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMAS 574

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
            G  P +VTY  LI      GR+E A      +Q+KGI      YN +I  L R +R  +
Sbjct: 575 DGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKE 634

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGN-WQEALRLYKEMLDREIEPDYCT 700
           A  LF +M E+   P+  TY I+    C  G    EA+    EML+R   P++ +
Sbjct: 635 AVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSS 689



 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 172/564 (30%), Positives = 286/564 (50%), Gaps = 16/564 (2%)

Query: 108 LRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGL 167
           L+F   +E + GV  +   +  +L +L++   L+    +VE +   NM       +  G+
Sbjct: 144 LQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLK----LVE-IAHSNM-------VSRGI 191

Query: 168 SSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKA 227
              VS    ++L+    +   +   +L+  +M   GLLPD K    I++   + G    A
Sbjct: 192 RPDVST--FNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGA 249

Query: 228 REVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR-GCSPNGVTYNVLIT 286
             V   M E G   + VT N +++ FCKEG ++EAL  + EM  R G  P+  T+N+L+ 
Sbjct: 250 MRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVN 309

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G S+ G ++ A  ++  ML+ G     ++YN +I G  + G + EA+ +  +M+ R  +P
Sbjct: 310 GLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSP 369

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
              TYN +I  LCK  +V +A      +  K ++PD+ +YN+L+ G C S N   A  L+
Sbjct: 370 NTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELY 429

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
            E++++   P   TYN LID LC  G L+ A  L + M   G   +VITY  +++G CK 
Sbjct: 430 KEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKN 489

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
             ++ A E F++M  +G+  +   Y T I G  K     EA +L ++M+ +G  PD  TY
Sbjct: 490 KRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTY 549

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           N L+   CK G +++A ++++ M  DG  PD +TY ++I    + G +     L   +  
Sbjct: 550 NSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQM 609

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR-LRRID 645
           KG++ T   Y  +I A   R R + A   F EM  K   P+ +TY  +  GLC+    I 
Sbjct: 610 KGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIG 669

Query: 646 QAYGLFIDMEEEGILPNKYTYTIL 669
           +A    ++M E G +P   ++ +L
Sbjct: 670 EAVDFVMEMLERGYVPEFSSFYML 693



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 172/546 (31%), Positives = 262/546 (47%), Gaps = 29/546 (5%)

Query: 74  CNNRWVSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEI 133
            ++  VS   +  VS   +L++ L R  +  R A+     +E   G+  DE  F TI++ 
Sbjct: 182 AHSNMVSRGIRPDVSTFNILIKALCRAHQ-IRPAILLMEEME-DFGLLPDEKTFTTIMQG 239

Query: 134 LIESGLLRSAYWVVETVV---CVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVE 190
            IE G L  A  V E +V   CV  +  ++VL+ G                 + K+  +E
Sbjct: 240 FIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNG-----------------FCKEGRIE 282

Query: 191 QCLLVFNKM-LRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           + L    +M LR G  PD    N ++  L   G    A EV  MM   G  P I TYN++
Sbjct: 283 EALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSL 342

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           +   CK GE+ EA+++L +M  R CSPN VTYN +I+   +  ++E+A  L   +   G+
Sbjct: 343 ISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGI 402

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
                +YN +I G         A+ L +EM T+G  P   TYN+LI  LC  G++ +A +
Sbjct: 403 LPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALN 462

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
              EM       ++I+YNTL+ G+C++  I EA  +FD++  + +    VTYNTLIDGLC
Sbjct: 463 LLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLC 522

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
           +   +E A QL + MI +G+ PD  TY  ++   CK G++  A +    M   G +PD  
Sbjct: 523 KSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIV 582

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
            Y T IAG  K G    A +L   +  KG       YN ++  L +    +EA  L R+M
Sbjct: 583 TYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREM 642

Query: 550 VGDGFIPDHITYTSIIHASLEMGD-LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           +     PD +TY  +     + G  +    D    ML +G  P   ++ +L     A G 
Sbjct: 643 IEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYML-----AEGL 697

Query: 609 LELAFM 614
             LA +
Sbjct: 698 FSLAMV 703



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 148/503 (29%), Positives = 242/503 (48%), Gaps = 37/503 (7%)

Query: 240 KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
           KPS   +  +L    K GE     ++L EM+      +  +  V I  ++  G   +   
Sbjct: 86  KPSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDNDSLLVFIESYASFGLYNEILQ 145

Query: 300 LIRDM-LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            +  M ++ G+  + H YN ++    +   L         MV+RG+ P ++T+NILI  L
Sbjct: 146 FVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKAL 205

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C+  ++  A     EM    ++PD  ++ T++ G+   GN+  A  + +++     V T 
Sbjct: 206 CRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTN 265

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENM-INQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           VT N L++G C+ G +E A +  E M + +G  PD  T+ ++VNG  K G++  A E  +
Sbjct: 266 VTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMD 325

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            MLR+G  PD + Y + I+G  KLG+  EA ++  +M+ +   P+ +TYN ++  LCK  
Sbjct: 326 MMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKEN 385

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            +EEA +L   + G G +PD  TY S+I       +     +L+  M  KG  P   TY 
Sbjct: 386 QVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYN 445

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL----------------------- 634
           +LI +   RG+L+ A     EM+V G   NVITYN L                       
Sbjct: 446 MLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQ 505

Query: 635 ------------INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
                       I+GLC+  R+++A  L   M  EG+ P+K+TY  L+   C AG+ ++A
Sbjct: 506 GVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKA 565

Query: 683 LRLYKEMLDREIEPDYCTHSALL 705
             + + M     EPD  T+  L+
Sbjct: 566 ADIVQTMASDGCEPDIVTYGTLI 588



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 81/304 (26%), Positives = 147/304 (48%), Gaps = 18/304 (5%)

Query: 106 IALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGG 165
           +A+  ++ ++T+ G   DEF +  +++ L   G L+ A               L++L   
Sbjct: 424 VAMELYKEMKTK-GCHPDEFTYNMLIDSLCFRGKLQEA---------------LNLLKEM 467

Query: 166 GLSSCV-SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS 224
            +S C  ++   + L+  + K   + +   +F++M   G+  +    N +I  L  +   
Sbjct: 468 EVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERV 527

Query: 225 VKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVL 284
            +A ++   M   G++P   TYN++L  FCK G++++A +++  M   GC P+ VTY  L
Sbjct: 528 EEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTL 587

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           I G  + G +E A  L+R +   G+ ++ H+YNP+I     +    EA+ L  EM+ +  
Sbjct: 588 IAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAE 647

Query: 345 APTLATYNILIYGLCKWG-RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF 403
           AP   TY I+  GLC+ G  + +A     EML +  +P+  S+  L  G      +G   
Sbjct: 648 APDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSLAMVGTLI 707

Query: 404 LLFD 407
            L D
Sbjct: 708 KLID 711


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  272 bits (696), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 145/426 (34%), Positives = 242/426 (56%), Gaps = 1/426 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V + +++ ++M+ NG  PDV   N I+  +  +G +  A ++ R M E  +K  + TY+T
Sbjct: 174 VSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYST 233

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++DS C++G +  A+ L  EM+ +G   + VTYN L+ G  + G+      L++DM+   
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           +  +  ++N ++  + ++G L EA  L +EM+TRG++P + TYN L+ G C   R+S+A 
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
           +    M+R    PDI+++ +L+ GYC    + +   +F  +  R LV   VTY+ L+ G 
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G +++A++L + M++ G+LPDV+TY I+++G C  G L  A E F ++ +  +    
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 473

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             YTT I G  K G   +A+ L   +  KG  P+++TY V++ GLCK GSL EAN LLRK
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 533

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M  DG  P+  TY ++I A L  GDL     L   M   G S    +  ++I    + G 
Sbjct: 534 MEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLS-GE 592

Query: 609 LELAFM 614
           L+ +F+
Sbjct: 593 LDKSFL 598



 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 155/529 (29%), Positives = 275/529 (51%), Gaps = 6/529 (1%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +  + +F +M+R+  LP + + +R    + R   F++   +  + +   GI  +I T N 
Sbjct: 70  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNL-VLDFCKQLELNGIAHNIYTLNI 128

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           M++ FC+  +   A  +L ++   G  P+  T+N LI G    G++ +A  L+  M++ G
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            +    +YN I+ G    G    AL+L  +M  R V   + TY+ +I  LC+ G +  A 
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F EM  K +   +++YN+L+ G C++G   +  LL  ++ SR +VP V+T+N L+D  
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
            + G L+ A +L + MI +GI P++ITY  +++G C    LS A    + M+R    PD 
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 368

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             +T+ I G   +    +  ++   +  +G   + +TY++LV G C+ G ++ A EL ++
Sbjct: 369 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 428

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           MV  G +PD +TY  ++    + G L +  ++F ++ +  +   +V YT +I      G+
Sbjct: 429 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK 488

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           +E A+  F  +  KG++PNV+TY  +I+GLC+   + +A  L   MEE+G  PN  TY  
Sbjct: 489 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNT 548

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCT----HSALLLKQLDKDY 713
           LI  +   G+   + +L +EM       D  +       LL  +LDK +
Sbjct: 549 LIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELDKSF 597



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 197/394 (50%)

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
           +A+ L +EM+     P+L  ++     + +  + +       ++    +  +I + N ++
Sbjct: 71  DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
             +CR      A+ +  ++      P   T+NTLI GL   G +  A  L + M+  G  
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
           PDV+TY  +VNG C+ G+ S+A +   +M  + ++ D F Y+T I    + G    A  L
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
            +EM  KG    ++TYN LV GLCK G   +   LL+ MV    +P+ IT+  ++   ++
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
            G L+   +L+  M+ +G+SP ++TY  L+  +  + RL  A      M      P+++T
Sbjct: 311 EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVT 370

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           + +LI G C ++R+D    +F ++ + G++ N  TY+IL+   C +G  + A  L++EM+
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430

Query: 691 DREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
              + PD  T+  LL    D      A+E  E L
Sbjct: 431 SHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  272 bits (696), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 163/524 (31%), Positives = 265/524 (50%), Gaps = 1/524 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           ++  L +FN+MLR    P + + ++++  +           +Y+ M  FGI  +  T N 
Sbjct: 35  IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++SFC    +  A  +L ++   G  P+  T+  LI G    G++ +A  L   M   G
Sbjct: 95  LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            +    +Y  +I G  + G    A+     M  R   PT+  Y+ +I  LCK  ++++A 
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEAL 214

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F +ML K + P+  +Y++L++G C  G+  EA  LF  +  R ++P  +T+NTL+D L
Sbjct: 215 SLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDAL 274

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G +  A  + + MI   + PDV+TY  +++G C    +      F+ M+RKG  P  
Sbjct: 275 CKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSV 334

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
            +YTT I G  K+    +A  L EEM  +G  PD +TYN L+HGLC +G L +A  L  +
Sbjct: 335 ISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHE 394

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           MV  G IPD +TY  +     +   L     L   +    L P +  Y++++      G 
Sbjct: 395 MVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGE 454

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           LE A   FS++  KG+ P+V TY  +INGLC+   + +A  LF +M+E G  PN  TY +
Sbjct: 455 LEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNL 514

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
           +            A++L++EML R    D  T + LL++ L  D
Sbjct: 515 ITRGFLRNNETLRAIQLFQEMLSRGFSIDVST-TTLLVEMLSDD 557



 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 148/484 (30%), Positives = 250/484 (51%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PSIV ++ +L S  +       L L  +M   G   N  T N+LI  F     L  A  +
Sbjct: 52  PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 111

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           + D+LKLG + S  ++  +I G   +G + EAL L ++M   G  P + TY  LI GLCK
Sbjct: 112 LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 171

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G  S A      M ++N  P ++ Y+T++   C+   + EA  LF ++ ++ + P   T
Sbjct: 172 VGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFT 231

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y++LI GLC  G  + A +L   MI++ I+PD +T+  +V+  CK G +  A    + M+
Sbjct: 232 YSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMI 291

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           +  L+PD   Y + + G     +  +   + + M+ KG  P +I+Y  L++G CK+  ++
Sbjct: 292 QSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMD 351

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           +A  L  +M   G IPD +TY ++IH    +G LR    LF+ M+  G  P LVTY +L 
Sbjct: 352 KAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILF 411

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                  RL  A +    ++   + P++  Y+ +++G+CR   ++ A  LF  +  +G+ 
Sbjct: 412 DYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLH 471

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
           P+  TYTI+IN  C  G   EA +L+ EM +    P+ CT++ +    L  +  + A++ 
Sbjct: 472 PDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQL 531

Query: 721 LESL 724
            + +
Sbjct: 532 FQEM 535



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 123/366 (33%), Positives = 197/366 (53%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   + + L +F+ ML  G+ P+    + +I  L   G   +A  ++  M    I P  +
Sbjct: 206 KDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQL 265

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           T+NT++D+ CKEG + +A  ++  M      P+ VTYN L+ G     E+ +   +   M
Sbjct: 266 TFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTM 325

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           ++ G   S  SY  +I GY +  ++ +A+ L EEM  +G+ P   TYN LI+GLC  GR+
Sbjct: 326 VRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRL 385

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            DA   F EM+    IPD+++Y  L    C++  + EA +L   +   NL P +  Y+ +
Sbjct: 386 RDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIV 445

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           +DG+CR G+LE A+ L   + ++G+ PDV TYTIM+NG C+ G L+ A + F EM   G 
Sbjct: 446 MDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGC 505

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            P+   Y     G L+  +T  A +L +EML++GF  D+ T  +LV  L   G  +   +
Sbjct: 506 SPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGLDQSVKQ 565

Query: 545 LLRKMV 550
           +L + V
Sbjct: 566 ILCEFV 571


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  272 bits (696), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 159/530 (30%), Positives = 261/530 (49%), Gaps = 1/530 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y   + ++  L  FN+ML     P + +  +I+  +           + R M  FGI  +
Sbjct: 49  YLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHN 108

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           + T N +++SFC    +  A  +L ++   GC P+  ++  LI G    G++ +A  L  
Sbjct: 109 VYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFD 168

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M+  G +     Y  +I G  + G    A+ L   M      P +  Y  LI+ LCK  
Sbjct: 169 KMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDR 228

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           + + A + F EM+ K + P+I++ N+L+Y  C  G       L +E+    ++P  ++  
Sbjct: 229 QQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLT 288

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           T++D LC+ G +  A  + + M   G+ PDV+TYT +++G C    +  A + F+ M+ K
Sbjct: 289 TVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHK 348

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G  P+ F+Y T I G  K+    +A  L EEM  +   P+ +TYN L+HGLC +G L++A
Sbjct: 349 GCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDA 408

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             L R+MV  G IPD +TY  ++    +   L +   L   +    L P +  YT++I  
Sbjct: 409 IALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDG 468

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
               G LE A   FS +  KG++PNV TYN + +GLC+   +D+A  LF++M+E     +
Sbjct: 469 MCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSAD 528

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
             TY  +            A++L +EML R    D  T + LL+  L  D
Sbjct: 529 GCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVST-TTLLVGMLSDD 577



 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 148/484 (30%), Positives = 247/484 (51%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PSIV +  +L S  K       L L  +M   G   N  T NVLI  F     +  A  +
Sbjct: 72  PSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSV 131

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  +LKLG +    S+  +I G   +G + EAL+L ++M+  G  P +  Y  LI GLCK
Sbjct: 132 LAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCK 191

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G  S A      M + N  PD++ Y TL++  C+     +AF LF E+ ++ + P +VT
Sbjct: 192 TGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVT 251

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
            N+L+  LC  G+ +    L   M++  I+P+ I+ T +V+  CK G ++ A +  + M 
Sbjct: 252 CNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMF 311

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           + G++PD   YT  I G     +  EA ++ + M+ KG  P++ +YN L++G CK+  ++
Sbjct: 312 QSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMD 371

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           +A  L  +M     IP+ +TY ++IH    +G L+    LF  M+  G  P LVTY +L+
Sbjct: 372 KAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILL 431

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                   L+ A      ++   + P++  Y  +I+G+CR   ++ A  LF ++  +G+ 
Sbjct: 432 DYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLK 491

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
           PN +TY I+ +  C  G   EA +L+ EM +     D CT++ +    L  +    A++ 
Sbjct: 492 PNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQL 551

Query: 721 LESL 724
           LE +
Sbjct: 552 LEEM 555



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 165/331 (49%), Gaps = 5/331 (1%)

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           +N     Y     + +A   F+ +   +  P++V +  ++  + +         L   M 
Sbjct: 42  HNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMD 101

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
           + GI  +V T  +++N  C +  ++ A     ++L+ G QPD  ++TT I G    G   
Sbjct: 102 SFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIG 161

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           EA  L ++M+ +GF PD++ Y  L++GLCK G    A  LLR M      PD + Y ++I
Sbjct: 162 EALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLI 221

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
           H+  +     +  +LF+ M+ KG+SP +VT   L++A    G  +      +EM    I 
Sbjct: 222 HSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIM 281

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           PN I+   +++ LC+   + QA+ +   M + G+ P+  TYT LI+ +C      EA+++
Sbjct: 282 PNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKV 341

Query: 686 YKEMLDREIEPDYCTHSALL-----LKQLDK 711
           +  M+ +   P+  +++ L+     ++++DK
Sbjct: 342 FDMMVHKGCAPNVFSYNTLINGYCKIERMDK 372



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 88/187 (47%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           ++  + +F +M+  G +PD+     ++  L  N    KA  + + +    + P I  Y  
Sbjct: 405 LQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTI 464

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++D  C+ GE+++A +L   +  +G  PN  TYN++  G  + G L++A  L  +M +  
Sbjct: 465 VIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENA 524

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
                 +YN I  G+        A+ L EEM+ RG +  ++T  +L+  L   G      
Sbjct: 525 CSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDGLDQSEA 584

Query: 369 HRFFEML 375
           H+  +M 
Sbjct: 585 HKLEDMF 591



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 1/161 (0%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +LL    K   +++ + +   +  + L PD++    +I  +   G    AR+++  +   
Sbjct: 429 ILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSK 488

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G+KP++ TYN M    CK G + EA +L  EM    CS +G TYN +  GF RN E  +A
Sbjct: 489 GLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRA 548

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGL-LVEALNLEE 337
             L+ +ML  G      +   ++   S+ GL   EA  LE+
Sbjct: 549 IQLLEEMLARGFSCDVSTTTLLVGMLSDDGLDQSEAHKLED 589



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 5/182 (2%)

Query: 551 GDGFIPDHITYTSIIHAS-----LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
           G G +     + S++H       L    L      FN ML     P++V +  ++ +   
Sbjct: 27  GTGMLSIPSPFLSLLHNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITK 86

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
             R         +M   GI  NV T N LIN  C L R++ A+ +   + + G  P+  +
Sbjct: 87  VKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTAS 146

Query: 666 YTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
           +T LI   C  G   EAL L+ +M+    +PD   ++ L+       +   A+  L S+ 
Sbjct: 147 FTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSME 206

Query: 726 LG 727
            G
Sbjct: 207 KG 208



 Score = 47.0 bits (110), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 71/168 (42%), Gaps = 7/168 (4%)

Query: 143 AYWVVETVVCVNMH-----GILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFN 197
            Y ++   +C N H      +L  + G  L     I+I  +++    +   +E    +F+
Sbjct: 426 TYRILLDYLCKNCHLDKAMALLKAIEGSNLDP--DIQIYTIVIDGMCRAGELEDARDLFS 483

Query: 198 KMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG 257
            +   GL P+V   N +   L   G   +A +++  M E        TYNT+   F +  
Sbjct: 484 NLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNN 543

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           E   A++LL EM  RG S +  T  +L+   S +G  +     + DM 
Sbjct: 544 ETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDGLDQSEAHKLEDMF 591


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  272 bits (696), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 156/505 (30%), Positives = 256/505 (50%), Gaps = 5/505 (0%)

Query: 205 LPDVKNCNRIIKVLRDNGFSVKAREVYRMMG----EFGIKPSIVTYNTMLDSFCKEGEMQ 260
           LP  K    ++K     G +   RE++  +       G K SIV ++ ++ S C      
Sbjct: 110 LPSPKPALHLLKQALGGGTTNSIREIFEFLAASRDRLGFKSSIV-FDYLIKSCCDMNRAD 168

Query: 261 EALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII 320
           EA E  + M+ +G  P   T N L++ F +    E A  L  +M +L +K S +++N +I
Sbjct: 169 EAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMI 228

Query: 321 CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
               ++G L +A +    M T GV P + TYN +++G C  GRV  A      M R+ + 
Sbjct: 229 NVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIE 288

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           PD  +Y +L+ G C+ G + EA  +F+E+  + L P+ V YNTLIDG C  G+L++A   
Sbjct: 289 PDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAY 348

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
           K+ M+ +GI P + TY  +++          A     E+  KG+ PD   Y   I G  +
Sbjct: 349 KDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCR 408

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
             +  +A+ L +EMLA G  P   TY  L+H L K   ++EA++L +K+  +G +PD I 
Sbjct: 409 CANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIM 468

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           + ++I       +++   +L  +M R  + P  VT+  ++  H   G++E A   F EM+
Sbjct: 469 FNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMK 528

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
            +GI+P+ I++N LI+G  R   I  A+ +  +M + G  P   TY  L+   C      
Sbjct: 529 RRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGD 588

Query: 681 EALRLYKEMLDREIEPDYCTHSALL 705
            A  L KEM+ + + PD  T+  L+
Sbjct: 589 LAEELLKEMVSKGMTPDDTTYFTLI 613



 Score =  262 bits (670), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 156/565 (27%), Positives = 274/565 (48%), Gaps = 14/565 (2%)

Query: 90  PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVET 149
           P L+ + L  + E P++ L F      +     D    C  + I+      + A  +++ 
Sbjct: 66  PSLISQTLLNLHESPQVVLDFLNHFHHKLS---DARTLCLAIVIVARLPSPKPALHLLKQ 122

Query: 150 VV----CVNMHGILDVLIGG----GLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLR 201
            +      ++  I + L       G  S +   + D L+      +  ++    F  M  
Sbjct: 123 ALGGGTTNSIREIFEFLAASRDRLGFKSSI---VFDYLIKSCCDMNRADEAFECFYTMKE 179

Query: 202 NGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQE 261
            G+LP ++ CN ++ +      +  A  +Y  M    IK S+ T+N M++  CKEG++++
Sbjct: 180 KGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKK 239

Query: 262 ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC 321
           A + +  M+  G  PN VTYN ++ G+  +G +E A  ++  M +  ++  + +Y  +I 
Sbjct: 240 AKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLIS 299

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           G  ++G L EA  + EEMV +G+ P+   YN LI G C  G +  A     EML+K + P
Sbjct: 300 GMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISP 359

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
            + +YN+L++         EA  +  E++ + + P  +TYN LI+G CR  + + A  L 
Sbjct: 360 TMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLH 419

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
           + M+  GI P   TYT +++   K   +  A + F ++  +G+ PD   +   I G    
Sbjct: 420 DEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSN 479

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
            +   A+ L ++M     PPD +T+N ++ G C+ G +EEA EL  +M   G  PDHI++
Sbjct: 480 SNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISF 539

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
            ++I      GD++    + N ML  G +PT++TY  L+         +LA     EM  
Sbjct: 540 NTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVS 599

Query: 622 KGIRPNVITYNALINGLCRLRRIDQ 646
           KG+ P+  TY  LI G+ ++   D+
Sbjct: 600 KGMTPDDTTYFTLIEGIAKVNIPDE 624



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/216 (23%), Positives = 103/216 (47%), Gaps = 14/216 (6%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G+K  +  + ++L +L +   ++ A  + + +      G+L  +I           + + 
Sbjct: 426 GIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITS---EGVLPDVI-----------MFNA 471

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  +   S V+    +   M R  + PD    N I++     G   +ARE++  M   G
Sbjct: 472 LIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRG 531

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           IKP  +++NT++  + + G++++A  +  EM   G +P  +TYN L+ G  +N E + A 
Sbjct: 532 IKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAE 591

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
            L+++M+  G+     +Y  +I G ++  +  E  N
Sbjct: 592 ELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDENKN 627


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  272 bits (696), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 144/454 (31%), Positives = 250/454 (55%)

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
           + G +P+ +T++T+++  C EG + EALEL+  M   G  P+ +T N L+ G   +G+  
Sbjct: 249 KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA 308

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
           +A  LI  M++ G + +A +Y P++    + G    A+ L  +M  R +      Y+I+I
Sbjct: 309 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 368

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
            GLCK G + +A + F EM  K +  +II+YN L+ G+C +G   +   L  ++  R + 
Sbjct: 369 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 428

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P VVT++ LID   + G L  A++L + MI++GI PD ITYT +++G CK  +L  A + 
Sbjct: 429 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 488

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
            + M+ KG  P+   +   I G  K     +   L  +M  +G   D +TYN L+ G C+
Sbjct: 489 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 548

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
           LG L  A EL ++MV     P+ +TY  ++    + G+  +  ++F  + +  +   +  
Sbjct: 549 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI 608

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           Y ++IH      +++ A+  F  + +KG++P V TYN +I GLC+   + +A  LF  ME
Sbjct: 609 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 668

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           E+G  P+ +TY ILI  +   G+  ++++L +E+
Sbjct: 669 EDGHAPDGWTYNILIRAHLGDGDATKSVKLIEEL 702



 Score =  272 bits (695), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 150/536 (27%), Positives = 278/536 (51%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
            +  + +F  M+ +  LP V + +R+   +           + + M   GI  ++ T + 
Sbjct: 167 ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 226

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           M++ FC+  ++  A   + ++   G  PN +T++ LI G    G + +A  L+  M+++G
Sbjct: 227 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 286

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            K    + N ++ G    G   EA+ L ++MV  G  P   TY  ++  +CK G+ + A 
Sbjct: 287 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 346

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               +M  +N+  D + Y+ ++ G C+ G++  AF LF+E+  + +   ++TYN LI G 
Sbjct: 347 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 406

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C  G  +   +L  +MI + I P+V+T++++++   K G L  A E   EM+ +G+ PD 
Sbjct: 407 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 466

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             YT+ I G  K     +A ++ + M++KG  P++ T+N+L++G CK   +++  EL RK
Sbjct: 467 ITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 526

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M   G + D +TY ++I    E+G L   ++LF  M+ + + P +VTY +L+      G 
Sbjct: 527 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 586

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
            E A   F +++   +  ++  YN +I+G+C   ++D A+ LF  +  +G+ P   TY I
Sbjct: 587 SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI 646

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           +I   C  G   EA  L+++M +    PD  T++ L+   L       +V+ +E L
Sbjct: 647 MIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEEL 702



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 139/410 (33%), Positives = 217/410 (52%)

Query: 191 QCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTML 250
           + +L+ +KM+  G  P+      ++ V+  +G +  A E+ R M E  IK   V Y+ ++
Sbjct: 309 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 368

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
           D  CK G +  A  L  EM+ +G + N +TYN+LI GF   G  +    L+RDM+K  + 
Sbjct: 369 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 428

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
            +  +++ +I  + ++G L EA  L +EM+ RG+AP   TY  LI G CK   +  A   
Sbjct: 429 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 488

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
              M+ K   P+I ++N L+ GYC++  I +   LF ++  R +V   VTYNTLI G C 
Sbjct: 489 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 548

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
            G L VA++L + M+++ + P+++TY I+++G C  G    A E F ++ +  ++ D   
Sbjct: 549 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI 608

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           Y   I G        +A+ L   +  KG  P + TYN+++ GLCK G L EA  L RKM 
Sbjct: 609 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 668

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
            DG  PD  TY  +I A L  GD  +   L   + R G S    T  ++I
Sbjct: 669 EDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVI 718



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 137/476 (28%), Positives = 231/476 (48%), Gaps = 35/476 (7%)

Query: 198 KMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG 257
           K+++ G  P+    + +I  L   G   +A E+   M E G KP ++T NT+++  C  G
Sbjct: 246 KIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSG 305

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
           +  EA+ L+ +M   GC PN VTY  ++    ++G+   A  L+R M +  +K+ A  Y+
Sbjct: 306 KEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 365

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            II G  + G L  A NL  EM  +G+   + TYNILI G C  GR  D      +M+++
Sbjct: 366 IIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 425

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
            + P++++++ L+  + + G + EA  L  E+  R + P  +TY +LIDG C+   L+ A
Sbjct: 426 KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 485

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
            Q+ + M+++G  P++ T+ I++NG CK   +    E F +M  +G+  D   Y T I G
Sbjct: 486 NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 545

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITY------------------------------- 526
             +LG  + A  L +EM+++  PP+++TY                               
Sbjct: 546 FCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 605

Query: 527 ----NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
               N+++HG+C    +++A +L   +   G  P   TY  +I    + G L     LF 
Sbjct: 606 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFR 665

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
            M   G +P   TY +LI AH   G    +     E++  G   +  T   +I+ L
Sbjct: 666 KMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 721



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 108/422 (25%), Positives = 181/422 (42%), Gaps = 70/422 (16%)

Query: 106 IALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGIL------ 159
           +A+   R +E +  +K D   +  I++ L + G L +A+ +   +    M GI       
Sbjct: 344 LAMELLRKMEER-NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM---EMKGITTNIITY 399

Query: 160 DVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLR 219
           ++LIGG                 +      +    +   M++  + P+V   + +I    
Sbjct: 400 NILIGG-----------------FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFV 442

Query: 220 DNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGV 279
             G   +A E+++ M   GI P  +TY +++D FCKE  + +A +++  M  +GC PN  
Sbjct: 443 KEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIR 502

Query: 280 TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
           T+N+LI G+ +   ++    L R M   G+     +YN +I G+ E G L  A  L +EM
Sbjct: 503 TFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEM 562

Query: 340 VTRGVAPTLATY-----------------------------------NILIYGLCKWGRV 364
           V+R V P + TY                                   NI+I+G+C   +V
Sbjct: 563 VSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 622

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            DA   F  +  K V P + +YN ++ G C+ G + EA LLF ++      P   TYN L
Sbjct: 623 DDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNIL 682

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV--------NGSCKMGNLSMAREFF 476
           I      GD   + +L E +   G   D  T  +++        N   K  N S +  F+
Sbjct: 683 IRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDDKANYFSKYHNCSKSTSFW 742

Query: 477 NE 478
           N+
Sbjct: 743 NQ 744


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  272 bits (696), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 175/618 (28%), Positives = 308/618 (49%), Gaps = 18/618 (2%)

Query: 90  PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVET 149
           P+ ++++L +  + P  AL  F  V   PG     +VF  IL+ L +  L+     +VE 
Sbjct: 10  PKRVIKLL-KSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVEL 68

Query: 150 VVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLR-NGLLPDV 208
           +         DV +               ++  Y K SM +Q L +F +M    G  P +
Sbjct: 69  IRTQKCKCPEDVAL--------------TVIKAYAKNSMPDQALDIFQRMHEIFGCQPGI 114

Query: 209 KNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWE 268
           ++ N ++  L ++    +A   +      G+ P++ TYN ++   C++ +  +A ELL  
Sbjct: 115 RSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNW 174

Query: 269 MQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
           M  +G SP+  +Y  LI   ++NG +  A  L  +M + G+      YN +I G+ +KG 
Sbjct: 175 MWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGD 234

Query: 329 LVEALNLEEEMVT-RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYN 387
           ++ A  + E ++    V P + +YN++I GLCK G+  ++   +  M +     D+ +Y+
Sbjct: 235 ILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYS 294

Query: 388 TLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
           TL++G C SGN+  A  ++ E+    + P VV YNT+++G  R G +E   +L + M  +
Sbjct: 295 TLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKE 354

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
           G    V++Y I++ G  +   +  A   +  +  K    D   Y   + G  K G  ++A
Sbjct: 355 GCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKA 413

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
             + EE        D   Y+ +++GLC+ G L+E   +L +M   G  P+     ++I+ 
Sbjct: 414 LSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVING 473

Query: 568 SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
            +    L      F NM+ KG  PT+VTY  LI+  +   R   A+    EM  KG +PN
Sbjct: 474 FVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPN 533

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYK 687
           +ITY+ L+NGLC+ +++D A  L+    E+G  P+   + I+I+  C++G  ++AL+LY 
Sbjct: 534 MITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYS 593

Query: 688 EMLDREIEPDYCTHSALL 705
           EM  R+  P+  TH+ L+
Sbjct: 594 EMKQRKCVPNLVTHNTLM 611



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 170/610 (27%), Positives = 282/610 (46%), Gaps = 65/610 (10%)

Query: 104 PRIALRFFRWVE----TQPGVKRDEFVFCTILEILIESGLLRSA---YWVVETVVCVNMH 156
           P  AL  F+ +      QPG++     + ++L  LIES     A   +   ET+      
Sbjct: 94  PDQALDIFQRMHEIFGCQPGIRS----YNSLLNALIESNKWDEAESFFLYFETM------ 143

Query: 157 GILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK 216
                    GLS   +++  ++L+ I  +K   ++   + N M   G  PDV +   +I 
Sbjct: 144 ---------GLSP--NLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLIN 192

Query: 217 VLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWE--MQGRGC 274
            L  NG+   A +++  M E G+ P +  YN ++D F K+G++  A E+ WE  ++G   
Sbjct: 193 SLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEI-WERLLKGPSV 251

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
            PN  +YNV+I G  + G+ +++  +   M K       ++Y+ +I G    G L  A  
Sbjct: 252 YPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATR 311

Query: 335 LEEEMVTRGVAP----------------------------------TLATYNILIYGLCK 360
           + +EM   GV+P                                  T+ +YNILI GL +
Sbjct: 312 VYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFE 371

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
             +V +A   +  +  K+   D ++Y  L++G C++G + +A  + +E  +         
Sbjct: 372 NAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFA 431

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y+++I+GLCR G L+    + + M   G  P+      ++NG  +   L  A  FF  M+
Sbjct: 432 YSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMV 491

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            KG  P    Y T I G  K    SEAY L +EML KG+ P++ITY++L++GLC+   L+
Sbjct: 492 SKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLD 551

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
            A  L  + +  GF PD   +  IIH     G +     L++ M ++   P LVT+  L+
Sbjct: 552 MALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLM 611

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                    E A   +  +   G +P++I+YN  + GLC   RI  A G   D  + G+L
Sbjct: 612 EGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVL 671

Query: 661 PNKYTYTILI 670
           P   T+ IL+
Sbjct: 672 PTAITWNILV 681



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 154/580 (26%), Positives = 276/580 (47%), Gaps = 34/580 (5%)

Query: 58  YKELIISTVEEKPWAFCNNRWVSDHFQAVVSDPEL-----LVRVLNRIREKPRIALRFFR 112
           Y  L+ + +E   W    + ++  +F+ +   P L     L+++  R ++  + A     
Sbjct: 117 YNSLLNALIESNKWDEAESFFL--YFETMGLSPNLQTYNILIKISCRKKQFDK-AKELLN 173

Query: 113 WVETQPGVKRDEFVFCTILEILIESGLLRSAY---------WVVETVVCVNM--HGIL-- 159
           W+  Q G   D F + T++  L ++G +  A           V   V C N+   G    
Sbjct: 174 WMWEQ-GFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKK 232

Query: 160 -DVLIGG--------GLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKN 210
            D+L           G S   +I   ++++    K    ++   ++++M +N    D+  
Sbjct: 233 GDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYT 292

Query: 211 CNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQ 270
            + +I  L  +G    A  VY+ M E G+ P +V YNTML+ + + G ++E LEL   M+
Sbjct: 293 YSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVME 352

Query: 271 GRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLV 330
             GC    V+YN+LI G   N ++++A  +   + +      + +Y  ++ G  + G L 
Sbjct: 353 KEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLN 411

Query: 331 EALN-LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTL 389
           +AL+ LEE    RG   T A Y+ +I GLC+ GR+ +      +M +    P+    N +
Sbjct: 412 KALSILEEAENGRGDLDTFA-YSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAV 470

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
           + G+ R+  + +A   F  + S+   PTVVTYNTLI+GL +      A  L + M+++G 
Sbjct: 471 INGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGW 530

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
            P++ITY++++NG C+   L MA   + + L KG +PD   +   I G    G   +A +
Sbjct: 531 KPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQ 590

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           L  EM  +   P+L+T+N L+ G  K+   E A+++   ++  G  PD I+Y   +    
Sbjct: 591 LYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLC 650

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRL 609
               +       N+ + +G+ PT +T+ +L+ A    G L
Sbjct: 651 SCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNGAL 690



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 130/241 (53%)

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           V   M + G KP+    N +++ F +  ++++AL     M  +GC P  VTYN LI G S
Sbjct: 451 VLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLS 510

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           +     +A  L+++ML  G K +  +Y+ ++ G  +   L  ALNL  + + +G  P + 
Sbjct: 511 KAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVK 570

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
            +NI+I+GLC  G+V DA   + EM ++  +P+++++NTL+ G+ +  +   A  ++D +
Sbjct: 571 MHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHI 630

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
                 P +++YN  + GLC    +  A     + +++G+LP  IT+ I+V      G L
Sbjct: 631 LQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNGAL 690

Query: 470 S 470
           +
Sbjct: 691 T 691



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 85/174 (48%), Gaps = 4/174 (2%)

Query: 556 PDHITYTSI-IHASLEMGDLRRGRDLFNNMLRK-GLSPTLVTYTVLIHAHAARGRLELAF 613
           P+ +  T I  +A   M D  +  D+F  M    G  P + +Y  L++A     + + A 
Sbjct: 77  PEDVALTVIKAYAKNSMPD--QALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAE 134

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
            +F   +  G+ PN+ TYN LI   CR ++ D+A  L   M E+G  P+ ++Y  LIN  
Sbjct: 135 SFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSL 194

Query: 674 CNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLG 727
              G   +AL+L+ EM +R + PD   ++ L+     K   ++A E  E L  G
Sbjct: 195 AKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKG 248


>gi|296081012|emb|CBI18516.3| unnamed protein product [Vitis vinifera]
          Length = 967

 Score =  272 bits (695), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 189/633 (29%), Positives = 303/633 (47%), Gaps = 34/633 (5%)

Query: 105 RIALRFFRWVETQPG--VKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVL 162
           R+AL+F +WV  QPG  +K    ++C    IL+++ +  SA  ++  +      GI    
Sbjct: 91  RLALKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLC---QMGIGSKS 147

Query: 163 IGGGLSS----CVSI-KILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
           I G L      C SI  + DLL+ +Y K+ M++  +  F  +   G  P V  CN I+  
Sbjct: 148 IFGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILAS 207

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
           +  +  +     ++R M + GI P++ T+N +++  C EG +++A  LL +M+  G  P 
Sbjct: 208 MVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPT 267

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
            VTYN L+  + + G  + A  LI  M+  G++    +YN  I          +A  L +
Sbjct: 268 IVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLK 327

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
           +M    ++P   TYN LI G  K G++  A   F EM + ++ P+ ++YN L+ G+C  G
Sbjct: 328 KMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVG 387

Query: 398 NIGEAFLLFDELRSRNL-------------VPTVV----------TYNTLIDGLCRYGDL 434
           +  EA  L D + +  L             V  V+          T N L+  LCR G L
Sbjct: 388 DFEEALRLLDHMEAAGLRLNEHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKL 447

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
             A++   +M   G++P+ ITY  ++NG   +G+   A  FF++M++ G  P  F Y + 
Sbjct: 448 GEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSL 507

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           + G  K G+  EA +    +       D + YN L+   CK G+L EA  L  KMV +  
Sbjct: 508 LKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNV 567

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG-LSPTLVTYTVLIHAHAARGRLELAF 613
           +PD  TY+S++      G       LF   + +G L P  V YT L+   +  G  + AF
Sbjct: 568 LPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAF 627

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
            +F EM  KG  P+ + +NA+I+   R  ++ +A   F  M   G+ PN  TY IL++  
Sbjct: 628 YFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGF 687

Query: 674 CNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
                    L LY  M+   I PD  T  +L+L
Sbjct: 688 SKKQALLRYLSLYSTMMREGIFPDKLTFHSLIL 720



 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 167/586 (28%), Positives = 269/586 (45%), Gaps = 77/586 (13%)

Query: 194 LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
           L+  KM +  + P+    N +I      G    A +V+  M +F + P+ VTYN ++   
Sbjct: 324 LLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGH 383

Query: 254 CKEGEMQEALELLWEMQGRG--------------------CSPNGV---TYNVLITGFSR 290
           C  G+ +EAL LL  M+  G                    C+ +G    T NVL++   R
Sbjct: 384 CHVGDFEEALRLLDHMEAAGLRLNEHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCR 443

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
           +G+L +A   +  M ++GL  ++ +Y+ II GY   G  + A +  ++M+  G  P+  T
Sbjct: 444 DGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFT 503

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIP---DIISYNTLLYGYCRSGNIGEAFLLFD 407
           Y  L+ GLCK G + +A+ +F    R + IP   D + YNTLL   C+SGN+ EA  LFD
Sbjct: 504 YGSLLKGLCKGGNLVEAK-KFLN--RLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFD 560

Query: 408 ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL-PDVITYTIMVNGSCKM 466
           ++   N++P   TY++L+ GLCR G    A  L    + +G L P+ + YT +V+G  K 
Sbjct: 561 KMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKA 620

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G+   A  FF EM++KG  PD  A+   I    + G   +A      M   G  P+L TY
Sbjct: 621 GHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATY 680

Query: 527 NVLVHGLCKLGSL----------------------------------------------- 539
           N+L+HG  K  +L                                               
Sbjct: 681 NILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIM 740

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           EE+  +L +M+ +G IP H  Y ++I+    +GD++    L + M   G     V  + +
Sbjct: 741 EESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAM 800

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           +      G+ E A +    M    + P + T+  L++  CR  +I +A  L   ME  G+
Sbjct: 801 VRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGL 860

Query: 660 LPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             +   Y +LI   C  G+   A  LY+EM  R++ P+  T++ L+
Sbjct: 861 KLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLV 906



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 133/475 (28%), Positives = 219/475 (46%), Gaps = 13/475 (2%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           M R GL+P+    + II      G  + A   +  M + G  PS  TY ++L   CK G 
Sbjct: 457 MSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGN 516

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           + EA + L  +     + + V YN L+    ++G L +A  L   M++  +   +++Y+ 
Sbjct: 517 LVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSS 576

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVA-PTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
           ++ G   KG  V A+ L    + RG   P    Y  L+ GL K G    A + F EM++K
Sbjct: 577 LLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKK 636

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
              PD +++N ++    R G + +A   F  +R   + P + TYN L+ G  +   L   
Sbjct: 637 GTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRY 696

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCK----------MGNLSMARE--FFNEMLRKGLQ 485
             L   M+ +GI PD +T+  ++ G  K          +G + M       +EML  G+ 
Sbjct: 697 LSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEESTVVLHEMLENGVI 756

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           P    Y T I G  ++GD   A++L++EM A GF    +  + +V GL   G  E+A  +
Sbjct: 757 PKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLV 816

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
           L  M+    +P   T+T+++H       +     L   M   GL   +V Y VLI    A
Sbjct: 817 LDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCA 876

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
            G    AF  + EM+ + + PN+ TY  L++ +     + Q   L  D++E G++
Sbjct: 877 NGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGLI 931



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/392 (28%), Positives = 188/392 (47%), Gaps = 13/392 (3%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMG 235
           + LL    K   + + + +F+KM++N +LPD    + ++  L   G +V A  ++   MG
Sbjct: 540 NTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMG 599

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
              + P+ V Y  ++D   K G  + A     EM  +G  P+ V +N +I   SR G++ 
Sbjct: 600 RGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMM 659

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
           +A      M   G+  +  +YN ++ G+S+K  L+  L+L   M+  G+ P   T++ LI
Sbjct: 660 KANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLI 719

Query: 356 YGLCKWGR------------VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF 403
            GL K G             + ++     EML   VIP    Y TL+ G CR G+I  AF
Sbjct: 720 LGLSKSGIPDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAF 779

Query: 404 LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
            L DE+ +       V  + ++ GL   G  E A  + ++M+   +LP + T+T +++  
Sbjct: 780 KLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRF 839

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
           C+   ++ A +    M   GL+ D  AY   I G    GD++ A+ L EEM  +   P++
Sbjct: 840 CRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNI 899

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
            TY VLV  +    +L +  +LL  +   G I
Sbjct: 900 TTYAVLVDAISAANNLIQGEKLLTDLQERGLI 931



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 161/370 (43%), Gaps = 25/370 (6%)

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
           N IP +  ++ L+  Y + G I  A   F+ +      P+V T N ++  + +    E+ 
Sbjct: 160 NSIPSV--FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELV 217

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
             L   M ++GI P+V T+ I++NG C  GNL  A     +M   G  P    Y T +  
Sbjct: 218 WSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNW 277

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
             K G    A  L + M+ KG   D+ TYNV +  LC      +A  LL+KM  +   P+
Sbjct: 278 YCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPN 337

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
            +TY ++I+  ++ G +     +FN M +  LSP  VTY  LI  H   G  E A     
Sbjct: 338 EVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLD 397

Query: 618 EMQVKGIRPNV-----------------------ITYNALINGLCRLRRIDQAYGLFIDM 654
            M+  G+R N                         T N L++ LCR  ++ +A      M
Sbjct: 398 HMEAAGLRLNEHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHM 457

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYK 714
              G++PN  TY  +IN   + G+   A   + +M+     P + T+ +LL         
Sbjct: 458 SRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNL 517

Query: 715 VHAVEYLESL 724
           V A ++L  L
Sbjct: 518 VEAKKFLNRL 527


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  272 bits (695), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 182/564 (32%), Positives = 277/564 (49%), Gaps = 39/564 (6%)

Query: 191 QCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTML 250
           + LLV  KM   G +P     N ++ VL   G   +A  +   +   G K S+V   T++
Sbjct: 230 RALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLM 289

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
             +C + E+++AL++  E    G  P  VTY VLI G +  G  E+A  L R M   GL 
Sbjct: 290 HGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLL 349

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
            S + +N +I G     L  +A++L +EM   G+ P   TYNILI+ LC+  ++ +A + 
Sbjct: 350 PSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNL 408

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY--------- 421
           + +M    V P I++Y++LL  YC +G + EA  L+ E+  +   P VVTY         
Sbjct: 409 WEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHIN 468

Query: 422 --------------------------NTLIDGLCRYGDL-EVAQQLKENMINQGILPDVI 454
                                     NTLI+GLC  G + EV + LK     +G +P  +
Sbjct: 469 KAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKR-FETEGFVPTAM 527

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
           TY  ++NG  K G +  A   + +M  KG+ P+   YT+ I G  K      A ++  ++
Sbjct: 528 TYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDV 587

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
             KG  PD+  YN L++G C+ G++  A ++L  M+ DG +P+   Y S I     +  +
Sbjct: 588 RCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMM 647

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
                 +  M+++G+     TYT LI   +  G +  A   +SEM  KG  P+ IT+ AL
Sbjct: 648 EEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTAL 707

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
            +GLCR   ID A  L  +M    I PN   Y +LIN     G  QEA RL+ EML+R+I
Sbjct: 708 THGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKI 767

Query: 695 EPDYCTHSALL-LKQLDKDYKVHA 717
            PD  T+  L+ +K L  D  + A
Sbjct: 768 MPDDTTYDILVGMKSLGSDSPIDA 791



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 163/566 (28%), Positives = 285/566 (50%), Gaps = 30/566 (5%)

Query: 94  VRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCV 153
           +  L ++R+  R AL   R ++    V  D F F +++++L++ G +  A  + + ++  
Sbjct: 219 IASLCKLRDANR-ALLVLRKMQDAGFVPWD-FTFNSVVDVLVKGGRMEEALHIKDELLAT 276

Query: 154 N-----------MHG---------ILDV----LIGGGLSSCVSIKILDLLLLIYTKKSMV 189
                       MHG          LD+    L  G + + V+  +L   +   T++ M 
Sbjct: 277 GKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVL---IRGCTEEGMP 333

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           E+   +  +M  +GLLP     N +IK L ++     A  +++ M + GI P   TYN +
Sbjct: 334 EKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNIL 392

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           +   C+  +++EAL L  +M   G  P  VTY+ L+  +  NG +++A  L  +M   G 
Sbjct: 393 IHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGF 452

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
             +  +Y  ++ G+  K    +A  L  EM   GV+    TYN LI GLC  GRV +   
Sbjct: 453 TPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGE 512

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
                  +  +P  ++YN+++ G+ ++G +G AF ++ ++ ++ + P +VTY + IDG C
Sbjct: 513 MLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYC 572

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
           +    ++A ++  ++  +G+ PD+  Y  ++ G C+ GN+S A +    ML+ GL P+  
Sbjct: 573 KTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNIS 632

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
            Y + I G   L    EA R  E+M+ +G   D  TY  L+ G  K G++  A +L  +M
Sbjct: 633 VYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEM 692

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRL 609
           V  G IPDHIT+T++ H     GD+   R L + M R  + P ++ Y +LI+ +   G+L
Sbjct: 693 VAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKL 752

Query: 610 ELAFMYFSEMQVKGIRPNVITYNALI 635
           + AF    EM  + I P+  TY+ L+
Sbjct: 753 QEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 130/492 (26%), Positives = 219/492 (44%), Gaps = 36/492 (7%)

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
           +++     G    A  ++  M    I+P     +  + S CK  +   AL +L +MQ  G
Sbjct: 183 VMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAG 242

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
             P   T+N ++    + G +E+A  +  ++L  G K+S      ++ GY  +  + +AL
Sbjct: 243 FVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKAL 302

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
           ++ EE +  G+ PT  TY +LI G  + G    A     +M    ++P    +N ++ G 
Sbjct: 303 DIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGL 362

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
                  +A  LF E+     +P   TYN LI  LC+   +  A  L E M   G+ P +
Sbjct: 363 LNDKLWKDAVSLFKEMADSG-IPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYI 421

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
           +TY  ++   C  G +  A + + EM  KG  P+   YTT + G +      +AY L  E
Sbjct: 422 VTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAE 481

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           M   G   +  TYN L++GLC +G + E  E+L++   +GF+                  
Sbjct: 482 MKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFV------------------ 523

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
                            PT +TY  +I+     G +  AF  + +M  KGI PN++TY +
Sbjct: 524 -----------------PTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTS 566

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
            I+G C+    D A  +  D+  +G+ P+   Y  LI   C  GN   AL++   ML   
Sbjct: 567 FIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDG 626

Query: 694 IEPDYCTHSALL 705
           + P+   +++ +
Sbjct: 627 LLPNISVYNSFI 638



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 207/437 (47%), Gaps = 1/437 (0%)

Query: 269 MQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
           M+ RG +P+  +   L+   +R+     A  L+ +M   G  + A  ++ ++    ++G+
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGM 192

Query: 329 LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNT 388
             +A+ L +EM    + P     ++ I  LCK    + A     +M     +P   ++N+
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 389 LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
           ++    + G + EA  + DEL +     +VV   TL+ G C   ++  A  + E  +  G
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
           ++P  +TYT+++ G  + G    A E   +M   GL P    +   I G L      +A 
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAV 372

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
            L +EM   G  PD  TYN+L+H LC+   + EA  L  KM   G  P  +TY S++   
Sbjct: 373 SLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCY 431

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
              G +     L+  M  KG +P +VTYT L+  H  +   + A+   +EM+  G+  N 
Sbjct: 432 CVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCND 491

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
            TYN LINGLC + R+ +   +    E EG +P   TY  +IN    AG    A  +Y++
Sbjct: 492 YTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQ 551

Query: 689 MLDREIEPDYCTHSALL 705
           M  + I P+  T+++ +
Sbjct: 552 MCAKGIPPNIVTYTSFI 568


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  272 bits (695), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 162/517 (31%), Positives = 260/517 (50%), Gaps = 4/517 (0%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV-YRMMGE 236
           +L+  + +   +E     F  +L++G   +    N+++K L D     +A ++  + M E
Sbjct: 99  ILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDILVKRMPE 158

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM---QGRGCSPNGVTYNVLITGFSRNGE 293
            G  P +V+YNT+L  FC E   +EALELL  M   QGR C PN V+Y ++I GF   G+
Sbjct: 159 LGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQ 218

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           +++A  L  +M+  G++ +  +Y  +I G  +  ++  A  + ++M+ +GV P   TYN 
Sbjct: 219 VDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNC 278

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           LI+G    G+  +      EM    + PD  +Y +LL   C +G   EA  LFD +  + 
Sbjct: 279 LIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKG 338

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           + P V  Y  LI G    G L     L   M+  G+ PD   + I+     K   +  A 
Sbjct: 339 IKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAM 398

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
             FN+M ++GL PD   Y   I    KLG   +A     +M+ +G  P++  +N LV+GL
Sbjct: 399 HIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGL 458

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
           C +   E+A E   +M+  G  PD + + +I+      G + + + L + M R G  P +
Sbjct: 459 CTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGV 518

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
           ++YT LI  H   GR++ A      M   G++P+  TYN L++G CR  RID AYG+F +
Sbjct: 519 ISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFRE 578

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           M   GI P   TY+ +++       + EA  LY  M+
Sbjct: 579 MLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMI 615



 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 150/542 (27%), Positives = 270/542 (49%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           +  +  V++   +F +M+  G+ P+V     +I  L       +A  V++ M + G+KP 
Sbjct: 213 FFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPD 272

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             TYN ++  +   G+ +E + +L EM   G  P+  TY  L+     NG   +AR L  
Sbjct: 273 NDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFD 332

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M++ G+K +   Y  +I GY+ KG L E  +L   MV  G++P    +NI+     K  
Sbjct: 333 SMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKA 392

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            + +A H F +M ++ + PD+++Y  L+   C+ G + +A L F+++ +  + P +  +N
Sbjct: 393 MIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFN 452

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           +L+ GLC     E A++    M+NQGI PDV+ +  ++   C  G +  A+   + M R 
Sbjct: 453 SLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERV 512

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G +P   +YTT I G   +G   EA +  + ML+ G  PD  TYN L+HG C+ G +++A
Sbjct: 513 GTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDA 572

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             + R+M+ +G  P  +TY++I+H           ++L+ NM+  G    +  Y ++++ 
Sbjct: 573 YGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNG 632

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
            +    ++ AF  F  +  K  +  + T+N +I  L +  R + A  LF  +   G++P+
Sbjct: 633 LSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPD 692

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLE 722
            +TY ++       G  +E   L+  M      P+    +AL+ + L +     A  YL 
Sbjct: 693 VFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLC 752

Query: 723 SL 724
            L
Sbjct: 753 KL 754



 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 163/542 (30%), Positives = 269/542 (49%), Gaps = 8/542 (1%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF---GIKP 241
           K  +V++   VF +M+  G+ PD    N +I      G   K +EV RM+ E    G+KP
Sbjct: 250 KAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIG---KWKEVVRMLEEMSAHGLKP 306

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
              TY ++L+  C  G  +EA  L   M  +G  PN   Y +LI G++  G L +   L+
Sbjct: 307 DCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLL 366

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
             M++ GL    H +N I   Y++K ++ EA+++  +M  +G++P +  Y  LI  LCK 
Sbjct: 367 NLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKL 426

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           GRV DA  +F +M+ + V P+I  +N+L+YG C      +A   + E+ ++ + P VV +
Sbjct: 427 GRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFF 486

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           NT++  LC  G +  AQ+L + M   G  P VI+YT ++ G C +G +  A +  + ML 
Sbjct: 487 NTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLS 546

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
            GL+PD + Y T + G  + G   +AY +  EML  G  P ++TY+ ++HGL       E
Sbjct: 547 VGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSE 606

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A EL   M+  G   +   Y  I++   +   +     LF ++  K     + T+ ++I 
Sbjct: 607 AKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIG 666

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
           A    GR E A   F+ +   G+ P+V TY  +   L     +++   LF  ME+ G  P
Sbjct: 667 ALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTP 726

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKD-YKVHAVEY 720
           N      L+    + G+   A     ++ ++    +  T +A+L+  L +D Y  HA   
Sbjct: 727 NSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEAST-TAMLISLLSRDEYHHHATSL 785

Query: 721 LE 722
            E
Sbjct: 786 PE 787



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 132/435 (30%), Positives = 225/435 (51%), Gaps = 4/435 (0%)

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
           +P+  TY++LI  F R G LE        +LK G +V+    N ++ G  +   L EA++
Sbjct: 91  TPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMD 150

Query: 335 -LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR---HRFFEMLRKNVIPDIISYNTLL 390
            L + M   G  P + +YN L+ G C   R  +A    H   +   ++  P+++SY  ++
Sbjct: 151 ILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVI 210

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
            G+   G + +A+ LF E+  R + P VVTY T+IDGLC+   ++ A+ + + MI++G+ 
Sbjct: 211 NGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVK 270

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
           PD  TY  +++G   +G          EM   GL+PD + Y + +      G   EA  L
Sbjct: 271 PDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFL 330

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
            + M+ KG  P++  Y +L+HG    G+L E ++LL  MV +G  PDH  +  I  A  +
Sbjct: 331 FDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAK 390

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
              +     +FN M ++GLSP +V Y  LI A    GR++ A + F++M  +G+ PN+  
Sbjct: 391 KAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFV 450

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           +N+L+ GLC + + ++A   + +M  +GI P+   +  ++   C  G   +A RL   M 
Sbjct: 451 FNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLME 510

Query: 691 DREIEPDYCTHSALL 705
                P   +++ L+
Sbjct: 511 RVGTRPGVISYTTLI 525



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 139/480 (28%), Positives = 231/480 (48%), Gaps = 6/480 (1%)

Query: 232 RMMGEFGIK--PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           RM+ E  IK  P   TY+ ++  FC+ G ++        +   G   N +  N L+ G  
Sbjct: 81  RMIRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLC 140

Query: 290 RNGELEQARG-LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT---RGVA 345
               L +A   L++ M +LG      SYN ++ G+  +    EAL L   M     R   
Sbjct: 141 DAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCP 200

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P + +Y I+I G    G+V  A + F EM+ + + P++++Y T++ G C++  +  A  +
Sbjct: 201 PNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGV 260

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
           F ++  + + P   TYN LI G    G  +   ++ E M   G+ PD  TY  ++N  C 
Sbjct: 261 FQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCN 320

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
            G    AR  F+ M+RKG++P+   Y   I G    G  SE + L   M+  G  PD   
Sbjct: 321 NGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHI 380

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           +N++     K   ++EA  +  KM   G  PD + Y ++I A  ++G +      FN M+
Sbjct: 381 FNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMM 440

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
            +G++P +  +  L++      + E A  ++ EM  +GIRP+V+ +N ++  LC   ++ 
Sbjct: 441 NEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVM 500

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +A  L   ME  G  P   +YT LI  +C  G   EA +    ML   ++PD  T++ LL
Sbjct: 501 KAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLL 560



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 137/495 (27%), Positives = 226/495 (45%), Gaps = 22/495 (4%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G+K D + + ++L  L  +G  R A +            + D +I  G+    ++ I  +
Sbjct: 303 GLKPDCYTYGSLLNYLCNNGRCREARF------------LFDSMIRKGIKP--NVAIYGI 348

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  Y  K  + +   + N M+ NGL PD    N I           +A  ++  M + G
Sbjct: 349 LIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQG 408

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           + P +V Y  ++D+ CK G + +A+    +M   G +PN   +N L+ G     + E+A+
Sbjct: 409 LSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAK 468

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
               +ML  G++     +N I+C    KG +++A  L + M   G  P + +Y  LI G 
Sbjct: 469 EFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGH 528

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C  GR+ +A      ML   + PD  +YNTLL+GYCR+G I +A+ +F E+    + P V
Sbjct: 529 CLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGV 588

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           VTY+T++ GL        A++L  NMI  G   ++  Y I++NG  K   +  A + F  
Sbjct: 589 VTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQS 648

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           +  K  Q +   +   I    K G   +A  L   + + G  PD+ TY ++   L + G 
Sbjct: 649 LCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGY 708

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           LEE ++L   M   G  P+     +++   L  GD+ R       +  K  S    T  +
Sbjct: 709 LEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAM 768

Query: 599 LI--------HAHAA 605
           LI        H HA 
Sbjct: 769 LISLLSRDEYHHHAT 783



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 4/209 (1%)

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD- 579
           PD  TY++L+   C++G LE        ++  G+  ++I    ++    +   L    D 
Sbjct: 92  PDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDI 151

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF---MYFSEMQVKGIRPNVITYNALIN 636
           L   M   G +P +V+Y  L+       R E A       ++ Q +   PNV++Y  +IN
Sbjct: 152 LVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVIN 211

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
           G     ++D+AY LF++M + GI PN  TYT +I+  C A     A  ++++M+D+ ++P
Sbjct: 212 GFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKP 271

Query: 697 DYCTHSALLLKQLDKDYKVHAVEYLESLT 725
           D  T++ L+   L        V  LE ++
Sbjct: 272 DNDTYNCLIHGYLSIGKWKEVVRMLEEMS 300


>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1084

 Score =  272 bits (695), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 184/697 (26%), Positives = 320/697 (45%), Gaps = 89/697 (12%)

Query: 92  LLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEIL---IESGLLRSAYWVVE 148
           L+V V+N ++  P + ++FF W   Q G      VF  +L++L   + +       +++E
Sbjct: 108 LVVEVMNNVK-NPELCVKFFLWAGRQIGYSHTPQVFDKLLDLLGCNVNADDRVPLKFLME 166

Query: 149 TVVCVNMHGILDVLIGGGLSSCV----------------------SIKILDLLLLIYTKK 186
             +  + H +L  L+   +  C                       S    + L+ ++ + 
Sbjct: 167 --IKDDDHELLRRLLNFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRA 224

Query: 187 SMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF-GIKPSIVT 245
             ++   LV  +ML    + D    +     L   G   K RE + ++ E     P  V 
Sbjct: 225 DKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGG---KCREAFDLIDEAEDFVPDTVF 281

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           YN M+   C+    +EA+++L  M+   C PN VTY +L++G  R G+L + + ++  M+
Sbjct: 282 YNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMI 341

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG-------- 357
             G   +   +N +I  Y +      A  L ++M+  G  P    YNI I          
Sbjct: 342 TEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQP 401

Query: 358 ---------------------------------LCKWGRVSDARHRFFEMLRKNVIPDII 384
                                            LC  G+   A     EM+ K  +PD  
Sbjct: 402 SSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDS 461

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
           +Y+ ++   C +  + +AF LF+E++   +VP+V TY  LID  C+ G ++ A++  + M
Sbjct: 462 TYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEM 521

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
           +++G  P+V+TYT +++   K   + +A E F  ML +G +P+   YT  I G  K G  
Sbjct: 522 LHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQI 581

Query: 505 SEAYRLQEEM--------LAKGFP--------PDLITYNVLVHGLCKLGSLEEANELLRK 548
            +A ++   M        + K F         P++ITY  LV GLCK   ++EA+ELL  
Sbjct: 582 EKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDT 641

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M+  G  P+ I Y ++I    ++G L+  +++F  M  +G SP L TY+  I       R
Sbjct: 642 MLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNR 701

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           L+L     S+M      PNV+ Y  +++GLC++ + D+AY L + MEE+G  PN  TYT 
Sbjct: 702 LDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTA 761

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +I+    +G  ++ L L+++M  +   P++ T+  L+
Sbjct: 762 MIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLI 798



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 145/538 (26%), Positives = 264/538 (49%), Gaps = 24/538 (4%)

Query: 174 KILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKA------ 227
           +I + L+  Y K         +F KM++ G  P     N  I  +  N     +      
Sbjct: 350 EIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLV 409

Query: 228 REVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITG 287
            + Y  M + G+  + V  +      C  G+  +A +++ EM G+G  P+  TY+ +I  
Sbjct: 410 EKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGF 469

Query: 288 FSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPT 347
                ++E+A  L  +M + G+  S ++Y  +I  + + GL+ +A    +EM+ +G  P 
Sbjct: 470 LCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPN 529

Query: 348 LATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFD 407
           + TY  LI+   K  ++  A   F  ML +   P++++Y  L+ G+C++G I +A  ++ 
Sbjct: 530 VVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYA 589

Query: 408 ELR----SRNLV------------PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
            +R    S ++             P V+TY  L+DGLC+   ++ A +L + M+  G  P
Sbjct: 590 RMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEP 649

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           + I Y  +++G CK+G L  A+E F +M  +G  P+ + Y++ I    K        ++ 
Sbjct: 650 NQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVL 709

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
            +ML     P+++ Y  +V GLCK+G  +EA +L+ KM   G  P+ +TYT++I    + 
Sbjct: 710 SKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKS 769

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
           G + +  +LF +M  KG +P  +TY VLI+   + G L+ A+    EM+      +++++
Sbjct: 770 GKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSH 829

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
             +I G    +    + GL  ++ E   +P    Y ILI+    AG  + AL L +E+
Sbjct: 830 RKIIEGFS--QEFITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEEI 885



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 154/527 (29%), Positives = 245/527 (46%), Gaps = 26/527 (4%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           +Q   +  +M+  G +PD    +++I  L D     KA  ++  M   GI PS+ TY  +
Sbjct: 442 DQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTIL 501

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           +DSFCK G +Q+A +   EM  +GC+PN VTY  LI  + +  ++  A  L   ML  G 
Sbjct: 502 IDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGC 561

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG------------------VAPTLATY 351
           K +  +Y  +I G+ + G + +A  +   M  RG                    P + TY
Sbjct: 562 KPNVVTYTALIDGHCKAGQIEKACQIYARM--RGDIESSDMDKYFKLDHNNCEGPNVITY 619

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
             L+ GLCK  RV +A      ML     P+ I Y+ ++ G+C+ G + +A  +F ++  
Sbjct: 620 GALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSE 679

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           R   P + TY++ ID L +   L++  ++   M+     P+V+ YT MV+G CK+G    
Sbjct: 680 RGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDE 739

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A +   +M  KG  P+   YT  I G  K G   +   L  +M +KG  P+ ITY VL++
Sbjct: 740 AYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLIN 799

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHI-TYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
             C  G L+EA +LL +M    + P HI ++  II    +  +      L + +      
Sbjct: 800 HCCSNGLLDEAYKLLDEM-KQTYWPKHILSHRKIIEGFSQ--EFITSIGLLDELSENESV 856

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRP--NVITYNALINGLCRLRRIDQAY 648
           P    Y +LI  +   GRLE+A     E+         N   Y +LI  L    ++D+A 
Sbjct: 857 PVDSLYRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKAL 916

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIE 695
            L+  M  + ++P       LI        WQEAL+L   +   +I 
Sbjct: 917 ELYASMISKNVVPELSILVHLIKGLIKVDKWQEALQLSDSICQMDIH 963



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 171/382 (44%), Gaps = 10/382 (2%)

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           N L+   C+ G  + A      +      P   +YN L+  + R+  +  A+L+  E+ S
Sbjct: 180 NFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLS 239

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
              V    T +     LC+ G    A  L +    +  +PD + Y  MV+G C+      
Sbjct: 240 YAFVMDRYTLSCFAYSLCKGGKCREAFDLIDEA--EDFVPDTVFYNRMVSGLCEASLFEE 297

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A +  + M      P+   Y   ++G L+ G      R+   M+ +G  P+   +N L+H
Sbjct: 298 AMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIH 357

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL-------FNNM 584
             CK      A +L +KM+  G  P ++ Y   I  S+   + +   D+       ++ M
Sbjct: 358 AYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFI-GSVCSNEEQPSSDILDLVEKAYSEM 416

Query: 585 LRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRI 644
           L  G+    V  +         G+ + AF    EM  KG  P+  TY+ +I  LC   ++
Sbjct: 417 LDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKV 476

Query: 645 DQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
           ++A+ LF +M+  GI+P+ YTYTILI+  C AG  Q+A + + EML +   P+  T++AL
Sbjct: 477 EKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTAL 536

Query: 705 LLKQLDKDYKVHAVEYLESLTL 726
           +   L       A E  E + L
Sbjct: 537 IHAYLKAKQMPVADELFEMMLL 558


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  272 bits (695), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 183/564 (32%), Positives = 277/564 (49%), Gaps = 39/564 (6%)

Query: 191 QCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTML 250
           + LLV  KM   G +P     N ++ VL   G   +A  +   +   G K S+V   T++
Sbjct: 230 RALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLM 289

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
             +C + E+++AL++  E    G  P  VTY VLI G +  G  E+A  L R M   GL 
Sbjct: 290 HGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLL 349

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
            S + +N +I G     L  +A++L +EM   G+ P   TYNILI+ LC+  ++ +A + 
Sbjct: 350 PSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNL 408

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY--------- 421
           + +M    V P I++Y++LL  YC +G + EA  L+ E+  +   P VVTY         
Sbjct: 409 WEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHIN 468

Query: 422 --------------------------NTLIDGLCRYGDL-EVAQQLKENMINQGILPDVI 454
                                     NTLI+GLC  G + EV + LK     +G +P  +
Sbjct: 469 KAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKR-FETEGFVPTAM 527

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
           TY  ++NG  K G +  A   + +M  KG+ P+   YT+ I G  K      A ++  ++
Sbjct: 528 TYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDV 587

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
             KG  PD+  YN L+ G C+ G++  A ++L  M+ DG +P+   Y S I     +  +
Sbjct: 588 RCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMM 647

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
                L+  M+++G+     TYT LI   +  G +  A   +SEM  KG  P+ IT+ AL
Sbjct: 648 EEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTAL 707

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
            +GLCR   ID A  L  +M    I PN   Y +LIN     G  QEA RL+ EML+R+I
Sbjct: 708 THGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKI 767

Query: 695 EPDYCTHSALL-LKQLDKDYKVHA 717
            PD  T+  L+ +K L  D  + A
Sbjct: 768 MPDDTTYDILVGMKSLGSDSPIDA 791



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 164/566 (28%), Positives = 286/566 (50%), Gaps = 30/566 (5%)

Query: 94  VRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCV 153
           +  L ++R+  R AL   R ++    V  D F F +++++L++ G +  A  + + ++  
Sbjct: 219 IASLCKLRDANR-ALLVLRKMQDAGFVPWD-FTFNSVVDVLVKGGRMEEALHIKDELLAT 276

Query: 154 N-----------MHG---------ILDV----LIGGGLSSCVSIKILDLLLLIYTKKSMV 189
                       MHG          LD+    L  G + + V+  +L   +   T++ M 
Sbjct: 277 GKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVL---IRGCTEEGMP 333

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           E+   +  +M  +GLLP     N +IK L ++     A  +++ M + GI P   TYN +
Sbjct: 334 EKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNIL 392

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           +   C+  +++EAL L  +M   G  P  VTY+ L+  +  NG +++A  L  +M   G 
Sbjct: 393 IHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGF 452

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
             +  +Y  ++ G+  K    +A  L  EM   GV+    TYN LI GLC  GRV +   
Sbjct: 453 TPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGE 512

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
                  +  +P  ++YN+++ G+ ++G +G AF ++ ++ ++ + P +VTY + IDG C
Sbjct: 513 MLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYC 572

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
           +    ++A ++  ++  +G+ PD+  Y  ++ G C+ GN+S A +    ML+ GL P+  
Sbjct: 573 KTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNIS 632

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
            Y + I G   L    EA RL E+M+ +G   D  TY  L+ G  K G++  A +L  +M
Sbjct: 633 VYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEM 692

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRL 609
           V  G IPDHIT+T++ H     GD+   R L + M R  + P ++ Y +LI+ +   G+L
Sbjct: 693 VAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKL 752

Query: 610 ELAFMYFSEMQVKGIRPNVITYNALI 635
           + AF    EM  + I P+  TY+ L+
Sbjct: 753 QEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 143/541 (26%), Positives = 249/541 (46%), Gaps = 34/541 (6%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           M   G+ PD K+   ++ V   +  +  A  +   M   G       ++ ++ +  KEG 
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEGM 192

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
             +A+ L  EM      P+    +V I    +  +  +A  ++R M   G      ++N 
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           ++    + G + EAL++++E++  G   ++     L++G C    V  A   F E LR  
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT--------------------- 417
           ++P  ++Y  L+ G    G   +A+ L  ++R   L+P+                     
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAV 372

Query: 418 -------------VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
                          TYN LI  LC+   +  A  L E M   G+ P ++TY  ++   C
Sbjct: 373 SLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYC 432

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
             G +  A + + EM  KG  P+   YTT + G +      +AY L  EM   G   +  
Sbjct: 433 VNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDY 492

Query: 525 TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM 584
           TYN L++GLC +G + E  E+L++   +GF+P  +TY SII+  ++ G +     ++  M
Sbjct: 493 TYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQM 552

Query: 585 LRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRI 644
             KG+ P +VTYT  I  +      +LA    ++++ KG+RP++  YN+LI G C+   +
Sbjct: 553 CAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNM 612

Query: 645 DQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
             A  + + M ++G+LPN   Y   I    N    +EALRLY++M+   I+ D  T++ L
Sbjct: 613 SHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTL 672

Query: 705 L 705
           +
Sbjct: 673 I 673



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 122/454 (26%), Positives = 206/454 (45%), Gaps = 1/454 (0%)

Query: 268 EMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKG 327
           EM+G+G   +   ++V++    + G  + A  L  +M    ++      +  I    +  
Sbjct: 167 EMRGKGRPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226

Query: 328 LLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYN 387
               AL +  +M   G  P   T+N ++  L K GR+ +A H   E+L       ++   
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286

Query: 388 TLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
           TL++GYC    + +A  +F+E     LVPT VTY  LI G    G  E A +L   M + 
Sbjct: 287 TLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDH 346

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
           G+LP    + +++ G         A   F EM   G+ PD F Y   I    +     EA
Sbjct: 347 GLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREA 405

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
             L E+M   G  P ++TY+ L+   C  G ++EA +L  +M G GF P+ +TYT+++  
Sbjct: 406 LNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKG 465

Query: 568 SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
            +      +   L   M + G+S    TY  LI+     GR+          + +G  P 
Sbjct: 466 HINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPT 525

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYK 687
            +TYN++ING  +   +  A+ ++  M  +GI PN  TYT  I+  C       AL++  
Sbjct: 526 AMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLN 585

Query: 688 EMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYL 721
           ++  + + PD   +++L+     +    HA++ L
Sbjct: 586 DVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVL 619



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 125/263 (47%), Gaps = 1/263 (0%)

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
           +M  +G+ PD  + T ++  + +  + + A     EM  KG   D + +   +    K G
Sbjct: 132 SMEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEG 191

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
              +A RL +EM A    PD    +V +  LCKL     A  +LRKM   GF+P   T+ 
Sbjct: 192 MYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFN 251

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
           S++   ++ G +     + + +L  G   ++V  T L+H +  +  +  A   F E    
Sbjct: 252 SVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRD 311

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
           G+ P  +TY  LI G       ++AY L   M + G+LP+   + ++I    N   W++A
Sbjct: 312 GLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDA 371

Query: 683 LRLYKEMLDREIEPDYCTHSALL 705
           + L+KEM D  I PD  T++ L+
Sbjct: 372 VSLFKEMADSGI-PDAFTYNILI 393


>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
          Length = 745

 Score =  272 bits (695), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 157/492 (31%), Positives = 248/492 (50%), Gaps = 5/492 (1%)

Query: 205 LPDVKNC--NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           LP    C  N ++K L D G    AR+++    E    P +VTY  ++   C  GE++ A
Sbjct: 254 LPHKNVCSYNILLKALCDAGRVKDARQLF---DEMASAPDVVTYGILIHGHCALGELENA 310

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
           ++LL EM   G  PN   Y  ++      G +  A  ++ DM++  + +    Y  ++ G
Sbjct: 311 VKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSG 370

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
           +  KG LV A    +EM  +G+A    TY  +I GLC+   + +A     EM  + +  D
Sbjct: 371 FCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVD 430

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
            ++Y  L+ GYC+ G + EAF + + +  R + P VVTY  L DGLC+ GD++ A +L  
Sbjct: 431 EVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLH 490

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            M N+G+  +  TY  ++NG CK G L  A     +M    L+PD + YTT I    K G
Sbjct: 491 EMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSG 550

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
           D   A+ L +EML KG  P ++TYNVL++G C  G +E   +LL  M+     P+  TY 
Sbjct: 551 DLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYN 610

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
           S++       +++   +++  M  + + P   TY +LI  H     ++ A  +  EM  K
Sbjct: 611 SLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQK 670

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
           G R    +Y+ALI  L + ++  +A  LF DM +EG+      Y   I+ N N  N +  
Sbjct: 671 GFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDNLEST 730

Query: 683 LRLYKEMLDREI 694
           L L  E+++  I
Sbjct: 731 LALCDELVEASI 742



 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 164/474 (34%), Positives = 246/474 (51%), Gaps = 11/474 (2%)

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
           R + ++GI PS    N +L        + EA+EL  E+  +    N  +YN+L+      
Sbjct: 221 RRLRQYGISPSPEACNAVLSRL----PLDEAIELFQELPHK----NVCSYNILLKALCDA 272

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G ++ AR L  +M      V+   Y  +I G+   G L  A+ L +EMV  GV P    Y
Sbjct: 273 GRVKDARQLFDEMASAPDVVT---YGILIHGHCALGELENAVKLLDEMVAGGVEPNATVY 329

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
             ++  LC  G +SDA     +M+++ VI D   Y T+L G+C  G++  A   FDE++ 
Sbjct: 330 TSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQR 389

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           + L    VTY T+I+GLCR  +LE A++L + M  + +  D +TYT++++G CK G ++ 
Sbjct: 390 KGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAE 449

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A +  N M+++G+ P+   YT    G  K GD   A  L  EM  KG   +  TYN L++
Sbjct: 450 AFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLIN 509

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           GLCK G LE+A   +  M      PD  TYT++I A  + GDL R   L   ML KG+ P
Sbjct: 510 GLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKP 569

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
           T+VTY VL++     GR+E        M  K I PN  TYN+L+   C    +     ++
Sbjct: 570 TIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIY 629

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             M    + PN+ TY ILI  +C A N +EAL  + EM+ +       ++SAL+
Sbjct: 630 KGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALI 683



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 129/415 (31%), Positives = 216/415 (52%), Gaps = 6/415 (1%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +E  + + ++M+  G+ P+      ++ +L D G+   A  V   M +  +      Y T
Sbjct: 307 LENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTT 366

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +L  FC +G++  A     EMQ +G + +GVTY  +I G  R  ELE+A  L+++M    
Sbjct: 367 VLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARR 426

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           L V   +Y  +I GY ++G + EA  +   MV RGV P + TY  L  GLCK G V  A 
Sbjct: 427 LDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAAN 486

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               EM  K +  +  +YN+L+ G C++G + +A     ++ +  L P V TY TLID L
Sbjct: 487 ELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDAL 546

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ GDL+ A  L + M+++GI P ++TY +++NG C  G +   ++  + ML K + P+ 
Sbjct: 547 CKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNA 606

Query: 489 FAYTT---QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
             Y +   Q   E  +  T+E Y+    M ++   P+  TYN+L+ G CK  +++EA   
Sbjct: 607 ATYNSLMKQYCIENNMKSTTEIYK---GMRSRDVGPNENTYNILIKGHCKARNMKEALYF 663

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
             +M+  GF     +Y+++I    +       R+LF++M ++GL+     Y   I
Sbjct: 664 HDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYI 718



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 195/404 (48%), Gaps = 2/404 (0%)

Query: 158 ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
           +LD ++ GG+    ++    + LL    K  +   L V   M++  ++ D      ++  
Sbjct: 313 LLDEMVAGGVEPNATVYTSVVALLC--DKGWISDALRVVEDMVQRKVILDEALYTTVLSG 370

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
             + G  V AR  +  M   G+    VTY TM++  C+  E++EA +LL EM  R    +
Sbjct: 371 FCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVD 430

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
            VTY VLI G+ + G++ +A  +   M++ G+  +  +Y  +  G  ++G +  A  L  
Sbjct: 431 EVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLH 490

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
           EM  +G+     TYN LI GLCK G +  A     +M    + PD+ +Y TL+   C+SG
Sbjct: 491 EMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSG 550

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
           ++  A  L  E+  + + PT+VTYN L++G C  G +E  ++L + M+ + I P+  TY 
Sbjct: 551 DLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYN 610

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
            ++   C   N+    E +  M  + + P+   Y   I G  K  +  EA    +EM+ K
Sbjct: 611 SLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQK 670

Query: 518 GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
           GF     +Y+ L+  L K     EA EL   M  +G   +   Y
Sbjct: 671 GFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVY 714



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 119/417 (28%), Positives = 203/417 (48%), Gaps = 24/417 (5%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           GV+ +  V+ +++ +L + G +  A  VVE +V         V++   L + V       
Sbjct: 321 GVEPNATVYTSVVALLCDKGWISDALRVVEDMV------QRKVILDEALYTTV------- 367

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGF--SVKAREVYRMMGE 236
            L  +  K  +      F++M R GL  D      +I     NG   +V+  E  +++ E
Sbjct: 368 -LSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMI-----NGLCRAVELEEAEKLLQE 421

Query: 237 FGIKP---SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
              +      VTY  ++D +CK G+M EA ++   M  RG +PN VTY  L  G  + G+
Sbjct: 422 MWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGD 481

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           ++ A  L+ +M   GL+++A +YN +I G  + G L +A+    +M T  + P + TY  
Sbjct: 482 VQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTT 541

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           LI  LCK G +  A     EML K + P I++YN L+ G+C SG +     L D +  +N
Sbjct: 542 LIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKN 601

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           + P   TYN+L+   C   +++   ++ + M ++ + P+  TY I++ G CK  N+  A 
Sbjct: 602 IHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEAL 661

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            F +EM++KG +    +Y+  I    K     EA  L  +M  +G   +   Y+  +
Sbjct: 662 YFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYI 718



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/432 (24%), Positives = 187/432 (43%), Gaps = 66/432 (15%)

Query: 73  FCNNRWVSDHFQAV--------VSDPELLVRVLNRIREKPRI--ALRFFRWVETQPGVKR 122
            C+  W+SD  + V        + D  L   VL+    K  +  A R+F  ++ + G+  
Sbjct: 336 LCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRK-GLAT 394

Query: 123 DEFVFCTILEILIESGLLRSAYWVVETVVCVNM---HGILDVLIGGGLSSCVSIKILDLL 179
           D   + T++  L  +  L  A  +++ +    +        VLI G              
Sbjct: 395 DGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDG-------------- 440

Query: 180 LLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGI 239
              Y K+  + +   + N M++ G+ P+V     +   L   G    A E+   M   G+
Sbjct: 441 ---YCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGL 497

Query: 240 KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
           + +  TYN++++  CK G +++A+  + +M      P+  TY  LI    ++G+L++A  
Sbjct: 498 ELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHS 557

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
           L+++ML  G+K                                   PT+ TYN+L+ G C
Sbjct: 558 LLQEMLDKGIK-----------------------------------PTIVTYNVLMNGFC 582

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
             GRV   +     ML KN+ P+  +YN+L+  YC   N+     ++  +RSR++ P   
Sbjct: 583 MSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNEN 642

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
           TYN LI G C+  +++ A    + MI +G      +Y+ ++    K      ARE F++M
Sbjct: 643 TYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDM 702

Query: 480 LRKGLQPDRFAY 491
            ++GL  +   Y
Sbjct: 703 RKEGLTAESDVY 714



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 18/208 (8%)

Query: 517 KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
           K F  D  +++ L+  LC    L  A  LLR++   G  P         +A L    L  
Sbjct: 198 KTFSSDPASFDFLL--LC----LPSA-PLLRRLRQYGISPS----PEACNAVLSRLPLDE 246

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
             +LF  +  K     + +Y +L+ A    GR++ A   F EM      P+V+TY  LI+
Sbjct: 247 AIELFQELPHK----NVCSYNILLKALCDAGRVKDARQLFDEMASA---PDVVTYGILIH 299

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
           G C L  ++ A  L  +M   G+ PN   YT ++   C+ G   +ALR+ ++M+ R++  
Sbjct: 300 GHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVIL 359

Query: 697 DYCTHSALLLKQLDKDYKVHAVEYLESL 724
           D   ++ +L    +K   V A  + + +
Sbjct: 360 DEALYTTVLSGFCNKGDLVSARRWFDEM 387


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  272 bits (695), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 171/547 (31%), Positives = 278/547 (50%), Gaps = 43/547 (7%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P  ++ N ++ VL           V+  M   GI P++ T+  ++ + C   E+  A  L
Sbjct: 180 PTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACAL 239

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           L +M   GC PN + Y  LI    + G + +   L+ +ML +G     +++N  I G  +
Sbjct: 240 LKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCK 299

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
              + EA  L + M+ RG  P   TY +L++GLC+ G+V +AR     +L K   P+++ 
Sbjct: 300 MLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARM----LLNKVPNPNVVL 355

Query: 386 YNTLLYGYCRSGNIGEA-FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
           +NTL+ GY   G + EA  ++ + + S    P + TYNTLI GLC+ G L  A++L   M
Sbjct: 356 FNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEM 415

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
             +G  P+VITYTI+++  CK G L  AR   +EM  KGL  +   Y   I+   K    
Sbjct: 416 QIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKV 475

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
            +A  +  +M +KG  PD+ T+N L+ GLCK+   EEA  L + M+ +G I + ITY ++
Sbjct: 476 QDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTL 535

Query: 565 IHASLE-----------------------------------MGDLRRGRDLFNNMLRKGL 589
           IHA L                                     G++ +G  LF +M+ KGL
Sbjct: 536 IHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGL 595

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
           +P  ++  +LI+     G ++ A  +  +M  +G+ P+++TYN+LINGLC+  R  +A  
Sbjct: 596 NPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALN 655

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL---L 706
           LF  ++ EGI P+  TY  LI+ +C  G + +A  L    +D    P+  T   L+   +
Sbjct: 656 LFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFI 715

Query: 707 KQLDKDY 713
           K+ D+++
Sbjct: 716 KEGDQEF 722



 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 176/589 (29%), Positives = 290/589 (49%), Gaps = 31/589 (5%)

Query: 117 QPGVKRDEFVFCTILEILIESGL----------LRSAYWVVETVVCVNMHGILDVLIGGG 166
           Q G+   E +F  I++    +GL          +R  Y    T    N+  +LDVL+ G 
Sbjct: 139 QEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNV--VLDVLLAGN 196

Query: 167 LSSCVSIKILDLLL-----LIYTKKSMVEQCLLV---------FNKMLRNGLLPDVKNCN 212
               V     ++L       +YT   +++   LV            M R+G +P+     
Sbjct: 197 CPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQ 256

Query: 213 RIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR 272
            +I  L   G   +  ++   M   G  P + T+N  +   CK   + EA +L+  M  R
Sbjct: 257 TLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLR 316

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA 332
           G +PN  TY VL+ G  R G++++AR L+  +    + +    +N +I GY  +G L EA
Sbjct: 317 GFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVL----FNTLINGYVSRGRLDEA 372

Query: 333 LN-LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
              + E M++ G  P + TYN LI GLCK G +  AR    EM  K   P++I+Y  L+ 
Sbjct: 373 KAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILID 432

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
            +C+ G + EA  + DE+  + L    V YN LI  LC+   ++ A  +  +M ++G  P
Sbjct: 433 RFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKP 492

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           D+ T+  ++ G CK+     A   + +ML +G+  +   Y T I   L+ G   EA +L 
Sbjct: 493 DIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLV 552

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
            +ML +G P D ITYN L+  LC+ G++E+   L   M+  G  P++I+   +I+     
Sbjct: 553 NDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRT 612

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
           G+++   +   +M+ +GL+P +VTY  LI+     GR + A   F ++QV+GI P+ ITY
Sbjct: 613 GNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITY 672

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
           N LI+  C+    D A+ L     + G +PN+ T+ IL++     G+ +
Sbjct: 673 NTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 721



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 105/215 (48%), Gaps = 5/215 (2%)

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           EML+KG  P + T+ V++  LC +  ++ A  LL+ M   G +P+ I Y ++IHA  ++G
Sbjct: 207 EMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVG 266

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
            +     L   ML  G  P + T+   IH      R+  A      M ++G  PN  TY 
Sbjct: 267 RVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYG 326

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR-LYKEMLD 691
            L++GLCR+ ++D+A  L   +      PN   +  LIN   + G   EA   +++ ML 
Sbjct: 327 VLMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLS 382

Query: 692 REIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
               PD  T++ L+L    K Y V A E +  + +
Sbjct: 383 VGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQI 417



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 75/188 (39%), Gaps = 5/188 (2%)

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
           EL L   +     Q     KG+      Y +L+  L   G  +  + LL +M  +G +  
Sbjct: 86  ELPLDVPTSMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFR 145

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGL---SPTLVTYTVLIHAHAARGRLELAFM 614
              +  I+      G   +   L  +M  +G+    PT  +Y V++    A    ++   
Sbjct: 146 ESLFILIMKHYGRAGLPGQATRLLLDM--RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPN 203

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F EM  KGI P V T+  ++  LC +  +D A  L  DM   G +PN   Y  LI+   
Sbjct: 204 VFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALX 263

Query: 675 NAGNWQEA 682
             G   E 
Sbjct: 264 KVGRVNEV 271


>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19440, chloroplastic-like [Cucumis sativus]
          Length = 799

 Score =  272 bits (695), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 173/583 (29%), Positives = 279/583 (47%), Gaps = 45/583 (7%)

Query: 166 GLSSCVS----IKILDLLLLIYTK--KSMVEQCLL-VFNKMLRNGLLPDVKNCNRIIKVL 218
           GL+S V      +  DLL+ +Y+   +++   C + VF  + R G  P +K CN  +  L
Sbjct: 137 GLTSVVGRFEWTQAFDLLIHVYSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFXLSSL 196

Query: 219 -RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
            + N F  K  EV+R+M E G  P + ++  ++++ CK G+M+ A+EL  +M+  G SPN
Sbjct: 197 VKANEFE-KCCEVFRVMSE-GACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPN 254

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
            VTYN +I G  +NG L+ A  L   M   G++ +  +Y  +I G  +     +  ++ +
Sbjct: 255 VVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILD 314

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
           EM+  G  P +  +N LI G CK G +  A      M+ KN+ P  ++  +L+ G+C+S 
Sbjct: 315 EMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSD 374

Query: 398 NI-----------------------------------GEAFLLFDELRSRNLVPTVVTYN 422
            I                                     AF     + SRN  P+ +   
Sbjct: 375 QIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLT 434

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            L+ GLC+ G    A +L   ++ +G     +T   +++G C  G L  A     EML +
Sbjct: 435 MLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLER 494

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           GL  DR  Y   I G    G     +RL+EEM  +G  PD+ TYN L+ GLC +G L++A
Sbjct: 495 GLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDA 554

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            +L  +    G I +  TY  ++    +   +    +LFN +L K +    + Y ++I A
Sbjct: 555 IKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKA 614

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
           H   G +  A      M+ KGI PN  TY++LI+G+C +  ++ A  L  +M +EG +PN
Sbjct: 615 HCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPN 674

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
              YT LI   C  G    A   + EM+   I P+  T++ ++
Sbjct: 675 VVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMI 717



 Score =  263 bits (672), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 148/509 (29%), Positives = 255/509 (50%), Gaps = 35/509 (6%)

Query: 198 KMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG 257
           KM   G+ P++K    +I  L    F  K   +   M   G  P++V +N ++D +CK G
Sbjct: 280 KMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMG 339

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS----- 312
            ++ AL++   M  +  +P  VT   L+ GF ++ ++E A   + ++L  GL +      
Sbjct: 340 NIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCY 399

Query: 313 -----------------------AHSYNP-------IICGYSEKGLLVEALNLEEEMVTR 342
                                  + ++ P       ++CG  + G  +EA  L   ++ +
Sbjct: 400 SVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEK 459

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           G   +  T N LI+GLC  G++ +A     EML + +  D I+YN L+ G+C  G +   
Sbjct: 460 GSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGC 519

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
           F L +E+  R + P + TYN L+ GLC  G L+ A +L +     G++ ++ TY IM+ G
Sbjct: 520 FRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEG 579

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            CK   +      FNE+L K ++ +   Y   I    + G+ + A +L E M +KG  P+
Sbjct: 580 YCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPN 639

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
             TY+ L+HG+C +G +E+A  L+ +M  +GF+P+ + YT++I    ++G +      + 
Sbjct: 640 CATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWL 699

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
            M+   + P   TYTV+I  +   G +E A     +M+  GI P+V+TYN L NG C+  
Sbjct: 700 EMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKAN 759

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILIN 671
            +D A+ +   M  EG+  ++ TYT L++
Sbjct: 760 DMDNAFKVCDQMATEGLPVDEITYTTLVH 788



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 140/445 (31%), Positives = 232/445 (52%), Gaps = 2/445 (0%)

Query: 158 ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
           I DV+I   ++   S+ +  L+   + K   +E       ++L +GL     NC  ++  
Sbjct: 347 IKDVMISKNITP-TSVTLYSLMQ-GFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHW 404

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
           L        A    +MM     +PS +    ++   CK+G+  EA EL + +  +G   +
Sbjct: 405 LCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPAS 464

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
            VT N LI G    G+L +A  ++++ML+ GL +   +YN +I G+  +G +     L E
Sbjct: 465 KVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLRE 524

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
           EM  RG+ P + TYN L+ GLC  G++ DA   + E     +I +I +Y  ++ GYC++ 
Sbjct: 525 EMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKAN 584

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
            I +   LF+EL S+ +    + YN +I   C+ G++  A QL ENM ++GILP+  TY+
Sbjct: 585 RIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYS 644

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
            +++G C +G +  A+   +EM ++G  P+   YT  I G  KLG    A     EM++ 
Sbjct: 645 SLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISF 704

Query: 518 GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
              P+  TY V++ G CKLG++E+AN LL KM   G +PD +TY  + +   +  D+   
Sbjct: 705 NIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNA 764

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIHA 602
             + + M  +GL    +TYT L+H 
Sbjct: 765 FKVCDQMATEGLPVDEITYTTLVHG 789



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 138/510 (27%), Positives = 240/510 (47%), Gaps = 43/510 (8%)

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
            R+ GFS  A +V+ ++   G  PS+ T N  L S  K  E ++  E+ + +   G  P+
Sbjct: 162 FRNLGFSC-AVDVFYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCEV-FRVMSEGACPD 219

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
             ++  +I    + G++E A  L   M KL                              
Sbjct: 220 VFSFTNVINALCKGGKMENAIELFMKMEKL------------------------------ 249

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
                G++P + TYN +I GLC+ GR+ +A     +M  K V P++ +Y  L+ G  +  
Sbjct: 250 -----GISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLN 304

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
              +   + DE+      P VV +N LIDG C+ G++E A ++K+ MI++ I P  +T  
Sbjct: 305 FFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLY 364

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGL--QPDR-FAYTTQIAGELKLGDTSEAYRLQEEM 514
            ++ G CK   +  A     E+L  GL   PD  ++    +  + +      A+R  + M
Sbjct: 365 SLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRY---HSAFRFTKMM 421

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
           L++ F P  +   +LV GLCK G   EA EL  +++  G     +T  ++IH     G L
Sbjct: 422 LSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKL 481

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
                +   ML +GL    +TY  LI      G++E  F    EM  +GI+P++ TYN L
Sbjct: 482 PEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFL 541

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           + GLC + ++D A  L+ + +  G++ N +TY I++   C A   ++   L+ E+L +++
Sbjct: 542 LRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKM 601

Query: 695 EPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           E +   ++ ++           A++ LE++
Sbjct: 602 ELNSIVYNIIIKAHCQNGNVAAALQLLENM 631



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/478 (26%), Positives = 226/478 (47%), Gaps = 35/478 (7%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           + ++M+  G  P+V   N +I      G    A ++  +M    I P+ VT  +++  FC
Sbjct: 312 ILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFC 371

Query: 255 KEGEMQEALELLWEMQGRGCS-----------------------------------PNGV 279
           K  +++ A   L E+   G S                                   P+ +
Sbjct: 372 KSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDL 431

Query: 280 TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
              +L+ G  ++G+  +A  L   +L+ G   S  + N +I G    G L EA  + +EM
Sbjct: 432 LLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEM 491

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
           + RG+     TYN LI G C  G+V        EM ++ + PDI +YN LL G C  G +
Sbjct: 492 LERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKL 551

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
            +A  L+DE ++  L+  + TY  +++G C+   +E  + L   ++++ +  + I Y I+
Sbjct: 552 DDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNII 611

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           +   C+ GN++ A +    M  KG+ P+   Y++ I G   +G   +A  L +EM  +GF
Sbjct: 612 IKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGF 671

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
            P+++ Y  L+ G CKLG ++ A     +M+     P+  TYT +I    ++G++ +  +
Sbjct: 672 VPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANN 731

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
           L   M   G+ P +VTY VL +       ++ AF    +M  +G+  + ITY  L++G
Sbjct: 732 LLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 789



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 132/278 (47%), Gaps = 14/278 (5%)

Query: 116 TQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKI 175
           T+ G++ D + +  +L  L   G L  A              + D     GL S  +I  
Sbjct: 527 TKRGIQPDIYTYNFLLRGLCNVGKLDDAI------------KLWDEFKASGLIS--NIHT 572

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
             +++  Y K + +E    +FN++L   +  +    N IIK    NG    A ++   M 
Sbjct: 573 YGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMK 632

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
             GI P+  TY++++   C  G +++A  L+ EM+  G  PN V Y  LI G+ + G+++
Sbjct: 633 SKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMD 692

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
            A     +M+   +  +  +Y  +I GY + G + +A NL  +M   G+ P + TYN+L 
Sbjct: 693 TAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLT 752

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
            G CK   + +A     +M  + +  D I+Y TL++G+
Sbjct: 753 NGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 790



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 69/137 (50%)

Query: 188 MVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
           +VE    + ++M + G +P+V     +I      G    A   +  M  F I P+  TY 
Sbjct: 655 LVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYT 714

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
            M+D +CK G M++A  LL +M+  G  P+ VTYNVL  GF +  +++ A  +   M   
Sbjct: 715 VMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATE 774

Query: 308 GLKVSAHSYNPIICGYS 324
           GL V   +Y  ++ G++
Sbjct: 775 GLPVDEITYTTLVHGWN 791


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  272 bits (695), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 158/555 (28%), Positives = 280/555 (50%), Gaps = 3/555 (0%)

Query: 173 IKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR 232
           I I  LL  +   K + E   ++  +M   G +PD  +   ++K L +   + +A E+  
Sbjct: 126 IAINQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLH 185

Query: 233 MMGEFGIK---PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           MM +   +   P++V+Y+ +++ F  EG++ +   L  EM  RG  P+ VTY  +I G  
Sbjct: 186 MMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLC 245

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           +    ++A G+ + M+  G K + ++YN +I GY   G   E + + EEM  RG+ P   
Sbjct: 246 KAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCY 305

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           TY  L+  LCK GR  +AR  F  M+RK + P + +Y  L++GY   G + E     D +
Sbjct: 306 TYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLM 365

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
               L P    +N       + G ++ A  +   M   G+ P+V+ Y  +++  CK+G +
Sbjct: 366 VENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRV 425

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A   FN+M+ +G+ P+   + + + G   +     A  L  EML +G  P+ + +N L
Sbjct: 426 DDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTL 485

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           +  LC +G + E   L+  M   G  PD  +YT +I      G       +F+ M+  GL
Sbjct: 486 ICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGL 545

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
           SPT VTY  L+H + +  R++ A+  F EM  KG+ P V+TYN +++GL + +R  +A  
Sbjct: 546 SPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKE 605

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQL 709
           L+++M   G   + YTY I++N  C +    EA ++++ +  + ++ +  T + ++   L
Sbjct: 606 LYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALL 665

Query: 710 DKDYKVHAVEYLESL 724
               K  A++   ++
Sbjct: 666 KGGRKEDAMDLFAAI 680



 Score =  268 bits (685), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 150/542 (27%), Positives = 273/542 (50%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           +  +  V++   +F +M+  G+ PDV     +I  L       +A  V++ M + G KP+
Sbjct: 209 FFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPN 268

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             TYN ++  +   G+ +E +++L EM  RG  P+  TY  L+    +NG   +AR    
Sbjct: 269 NYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFD 328

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M++ G+K    +Y  +I GY+ KG L E  +  + MV  G++P    +NI      K G
Sbjct: 329 SMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCG 388

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            +  A   F +M +  + P++++Y  L+   C+ G + +A + F+++ +  + P +V +N
Sbjct: 389 MIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFN 448

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           +L+ GLC     E A++L   M++QGI P+ + +  ++   C +G +   R   + M   
Sbjct: 449 SLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHV 508

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G++PD F+YT  I+G    G T EA ++ + M++ G  P  +TYN L+HG C    +++A
Sbjct: 509 GVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDA 568

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             L R+M+  G  P  +TY +I+H   +       ++L+ NM+  G    + TY ++++ 
Sbjct: 569 YCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNG 628

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
                 ++ AF  F  +  KG++ N+IT+  +I  L +  R + A  LF  +   G++PN
Sbjct: 629 LCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPN 688

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLE 722
             TY ++       G+ +E   L+  M      P+    +AL+ + L +     A  YL 
Sbjct: 689 VVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLS 748

Query: 723 SL 724
            L
Sbjct: 749 KL 750



 Score =  261 bits (668), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 161/536 (30%), Positives = 262/536 (48%), Gaps = 6/536 (1%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF---GIKP 241
           K  + ++   VF +M+ NG  P+    N +I      G   K +EV +M+ E    G+KP
Sbjct: 246 KAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIG---KWKEVVQMLEEMSARGLKP 302

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
              TY ++L+  CK G  +EA      M  +G  P   TY +LI G++  G L +    +
Sbjct: 303 DCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFL 362

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
             M++ GL    H +N     Y++ G++ +A+++  +M   G++P +  Y  LI  LCK 
Sbjct: 363 DLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKL 422

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           GRV DA  +F +M+ + V P+I+ +N+L+YG C       A  L  E+  + + P  V +
Sbjct: 423 GRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFF 482

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           NTLI  LC  G +   ++L + M + G+ PD  +YT +++G C  G    A + F+ M+ 
Sbjct: 483 NTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVS 542

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
            GL P    Y T + G        +AY L  EML KG  P ++TYN ++HGL +     E
Sbjct: 543 IGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSE 602

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A EL   M+  G   D  TY  I++   +   +     +F ++  KGL   ++T+T++I 
Sbjct: 603 AKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIG 662

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
           A    GR E A   F+ +   G+ PNV+TY  +   L     +++   LF  ME+ G  P
Sbjct: 663 ALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAP 722

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHA 717
           N      L+    + G+   A     ++ +R    +  T S L+      +Y+ HA
Sbjct: 723 NSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLMSIFTSDEYQHHA 778



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 137/435 (31%), Positives = 225/435 (51%), Gaps = 4/435 (0%)

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
           +PN  TY++LI  F R G LE        +LK G ++   + N ++ G      + EA++
Sbjct: 87  APNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMD 146

Query: 335 -LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA---RHRFFEMLRKNVIPDIISYNTLL 390
            L + M   G  P   +Y IL+ GLC   R  +A    H   +   +   P+++SY+ ++
Sbjct: 147 VLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVI 206

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
            G+   G + + + LF E+  R + P VVTY T+IDGLC+    + A+ + + MI+ G  
Sbjct: 207 NGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFK 266

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
           P+  TY  +++G   +G      +   EM  +GL+PD + Y + +    K G   EA   
Sbjct: 267 PNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFF 326

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
            + M+ KG  P + TY +L+HG    G+L E +  L  MV +G  PDH  +     A  +
Sbjct: 327 FDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAK 386

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
            G + +  D+FN M + GLSP +V Y  LI A    GR++ A + F++M  +G+ PN++ 
Sbjct: 387 CGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVV 446

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           +N+L+ GLC + + ++A  L  +M ++GI PN   +  LI   CN G   E  RL   M 
Sbjct: 447 FNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLME 506

Query: 691 DREIEPDYCTHSALL 705
              + PD  +++ L+
Sbjct: 507 HVGVRPDAFSYTPLI 521



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 149/562 (26%), Positives = 262/562 (46%), Gaps = 45/562 (8%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLR----DNGFSVKAREVYRMMGEFG--IKPS 242
           ++  L +F+++L +     V+  N ++  +      +   +      RM+ E    + P+
Sbjct: 30  LDDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSDKVAPN 89

Query: 243 IVTYNTMLDSFCKEGEMQ-----------------------------------EALE-LL 266
           + TY+ ++  FC+ G ++                                   EA++ LL
Sbjct: 90  LCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLL 149

Query: 267 WEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML-KLGLKVSAH--SYNPIICGY 323
             M   GC P+ V+Y +L+ G       E+A  L+  M    G +   +  SY+ +I G+
Sbjct: 150 QRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGF 209

Query: 324 SEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
             +G + +  NL  EM+ RG+ P + TY  +I GLCK      A   F +M+     P+ 
Sbjct: 210 FTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNN 269

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
            +YN L++GY   G   E   + +E+ +R L P   TY +L++ LC+ G    A+   ++
Sbjct: 270 YTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDS 329

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           MI +GI P V TY I+++G    G LS    F + M+  GL PD   +    +   K G 
Sbjct: 330 MIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGM 389

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
             +A  +  +M   G  P+++ Y  L+  LCKLG +++A     +M+ +G  P+ + + S
Sbjct: 390 IDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNS 449

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           +++    +    R  +L   ML +G+ P  V +  LI      GR+         M+  G
Sbjct: 450 LVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVG 509

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
           +RP+  +Y  LI+G C   R D+A  +F  M   G+ P + TY  L++  C+A    +A 
Sbjct: 510 VRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAY 569

Query: 684 RLYKEMLDREIEPDYCTHSALL 705
            L++EML + + P   T++ +L
Sbjct: 570 CLFREMLRKGVTPGVVTYNTIL 591



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 144/482 (29%), Positives = 234/482 (48%), Gaps = 14/482 (2%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G+K D + + ++L  L ++G  R A +              D +I  G+   VS     +
Sbjct: 299 GLKPDCYTYGSLLNYLCKNGRCREARF------------FFDSMIRKGIKPKVST--YGI 344

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  Y  K  + +     + M+ NGL PD    N         G   KA +++  M + G
Sbjct: 345 LIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 404

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           + P++V Y  ++D+ CK G + +A     +M   G +PN V +N L+ G     + E+A 
Sbjct: 405 LSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAE 464

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L+ +ML  G+  +A  +N +IC     G ++E   L + M   GV P   +Y  LI G 
Sbjct: 465 ELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGY 524

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C  GR  +A   F  M+   + P  ++YNTLL+GYC +  I +A+ LF E+  + + P V
Sbjct: 525 CLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGV 584

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           VTYNT++ GL +      A++L  NMIN G   D+ TY I++NG CK   +  A + F  
Sbjct: 585 VTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQS 644

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           +  KGLQ +   +T  I   LK G   +A  L   + A G  P+++TY ++   L + GS
Sbjct: 645 LCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGS 704

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           LEE + L   M  +G  P+     +++   L  GD+ R     + +  +  S    T ++
Sbjct: 705 LEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSL 764

Query: 599 LI 600
           L+
Sbjct: 765 LM 766



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 138/454 (30%), Positives = 210/454 (46%), Gaps = 45/454 (9%)

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE------KGLLVEALNLEEEMVTR 342
           SR+  L+ A  L  ++L      S  ++N ++   S         L V   N      + 
Sbjct: 25  SRSLGLDDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSD 84

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
            VAP L TY+ILI   C+ G +      F  +L+     D I+ N LL G C    +GEA
Sbjct: 85  KVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEA 144

Query: 403 F-LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMIN---QGILPDVITYTI 458
             +L   +     +P  V+Y  L+ GLC     E A +L   M +   +   P+V++Y+I
Sbjct: 145 MDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSI 204

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           ++NG    G +      F EM+ +G+ PD   YTT I G  K      A  + ++M+  G
Sbjct: 205 VINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNG 264

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
           F P+  TYN L+HG   +G  +E  ++L +M   G  PD  TY S+++   + G  R  R
Sbjct: 265 FKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREAR 324

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRL----------------------------- 609
             F++M+RKG+ P + TY +LIH +A +G L                             
Sbjct: 325 FFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAY 384

Query: 610 ------ELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
                 + A   F++M+  G+ PNV+ Y ALI+ LC+L R+D A   F  M  EG+ PN 
Sbjct: 385 AKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNI 444

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
             +  L+   C    W+ A  L  EMLD+ I P+
Sbjct: 445 VVFNSLVYGLCTVDKWERAEELVYEMLDQGICPN 478



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/458 (27%), Positives = 211/458 (46%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL    K     +    F+ M+R G+ P V     +I      G   +      +M E G
Sbjct: 310 LLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENG 369

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           + P    +N    ++ K G + +A+++  +M+  G SPN V Y  LI    + G ++ A 
Sbjct: 370 LSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAE 429

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
                M+  G+  +   +N ++ G         A  L  EM+ +G+ P    +N LI  L
Sbjct: 430 VKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNL 489

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C  GRV + R     M    V PD  SY  L+ GYC +G   EA  +FD + S  L PT 
Sbjct: 490 CNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTE 549

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           VTYNTL+ G C    ++ A  L   M+ +G+ P V+TY  +++G  +    S A+E +  
Sbjct: 550 VTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLN 609

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M+  G + D + Y   + G  K     EA+++ + + +KG   ++IT+ +++  L K G 
Sbjct: 610 MINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGR 669

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
            E+A +L   +  +G +P+ +TY  +    +E G L     LF+ M + G +P       
Sbjct: 670 KEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNA 729

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
           L+     RG +  A  Y S++  +       T + L++
Sbjct: 730 LVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLMS 767



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 4/209 (1%)

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD- 579
           P+L TY++L+   C++G LE        ++  G+  DHI    ++        +    D 
Sbjct: 88  PNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDV 147

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR---PNVITYNALIN 636
           L   M   G  P  V+YT+L+       R E A      M     R   PNV++Y+ +IN
Sbjct: 148 LLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVIN 207

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
           G     ++D+ Y LF++M + GI P+  TYT +I+  C A  +  A  ++++M+D   +P
Sbjct: 208 GFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKP 267

Query: 697 DYCTHSALLLKQLDKDYKVHAVEYLESLT 725
           +  T++ L+   L        V+ LE ++
Sbjct: 268 NNYTYNCLIHGYLSIGKWKEVVQMLEEMS 296


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  271 bits (694), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 146/426 (34%), Positives = 241/426 (56%), Gaps = 1/426 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V + +++ ++M+ NG  PDV   N I+  +  +G +  A ++ R M E  +K  + TY+T
Sbjct: 174 VSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYST 233

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++DS C++G +  A+ L  EM+ +G   + VTYN L+ G  + G+      L++DM+   
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           +  +  ++N ++  + ++G L EA  L +EM+TRG++P + TYN L+ G C   R+S+A 
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
           +    M+R    PDI+++ +L+ GYC    + +   +F  +  R LV   VTY+ L+ G 
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G +++A++L + M++ G+LPDV+TY I+++G C  G L  A E F ++ +  +    
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 473

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             YTT I G  K G   +A+ L   +  KG  P+++TY V++ GLCK GSL EAN LLRK
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 533

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA-HAARG 607
           M  DG  P+  TY ++I A L  GDL     L   M   G S    +  ++I    +A  
Sbjct: 534 MEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMK 593

Query: 608 RLELAF 613
           RL L +
Sbjct: 594 RLTLRY 599



 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 149/501 (29%), Positives = 266/501 (53%), Gaps = 2/501 (0%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +  + +F +M+R+  LP + + +R    + R   F++   +  + +   GI  +I T N 
Sbjct: 70  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNL-VLDFCKQLELNGIAHNIYTLNI 128

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           M++ FC+  +   A  +L ++   G  P+  T+N LI G    G++ +A  L+  M++ G
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            +    +YN I+ G    G    AL+L  +M  R V   + TY+ +I  LC+ G +  A 
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F EM  K +   +++YN+L+ G C++G   +  LL  ++ SR +VP V+T+N L+D  
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
            + G L+ A +L + MI +GI P++ITY  +++G C    LS A    + M+R    PD 
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 368

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             +T+ I G   +    +  ++   +  +G   + +TY++LV G C+ G ++ A EL ++
Sbjct: 369 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 428

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           MV  G +PD +TY  ++    + G L +  ++F ++ +  +   +V YT +I      G+
Sbjct: 429 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK 488

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           +E A+  F  +  KG++PNV+TY  +I+GLC+   + +A  L   MEE+G  PN  TY  
Sbjct: 489 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNT 548

Query: 669 LINENCNAGNWQEALRLYKEM 689
           LI  +   G+   + +L +EM
Sbjct: 549 LIRAHLRDGDLTASAKLIEEM 569



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 137/492 (27%), Positives = 262/492 (53%), Gaps = 3/492 (0%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PS+V ++    +  +  +    L+   +++  G + N  T N++I  F R  +   A  +
Sbjct: 86  PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  ++KLG +    ++N +I G   +G + EA+ L + MV  G  P + TYN ++ G+C+
Sbjct: 146 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 205

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G  S A     +M  +NV  D+ +Y+T++   CR G I  A  LF E+ ++ +  +VVT
Sbjct: 206 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YN+L+ GLC+ G       L ++M+++ I+P+VIT+ ++++   K G L  A E + EM+
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            +G+ P+   Y T + G       SEA  + + M+     PD++T+  L+ G C +  ++
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           +  ++ R +   G + + +TY+ ++    + G ++   +LF  M+  G+ P ++TY +L+
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                 G+LE A   F ++Q   +   ++ Y  +I G+C+  +++ A+ LF  +  +G+ 
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 505

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQL-DKDYKVHA-- 717
           PN  TYT++I+  C  G+  EA  L ++M +    P+ CT++ L+   L D D    A  
Sbjct: 506 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKL 565

Query: 718 VEYLESLTLGAE 729
           +E ++S    A+
Sbjct: 566 IEEMKSCGFSAD 577



 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 134/445 (30%), Positives = 237/445 (53%), Gaps = 3/445 (0%)

Query: 230 VYRMMGE---FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
            Y ++G+    G +P   T+NT++     EG++ EA+ L+  M   GC P+ VTYN ++ 
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G  R+G+   A  L+R M +  +K    +Y+ II      G +  A++L +EM T+G+  
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
           ++ TYN L+ GLCK G+ +D      +M+ + ++P++I++N LL  + + G + EA  L+
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
            E+ +R + P ++TYNTL+DG C    L  A  + + M+     PD++T+T ++ G C +
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
             +    + F  + ++GL  +   Y+  + G  + G    A  L +EM++ G  PD++TY
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
            +L+ GLC  G LE+A E+   +         + YT+II    + G +    +LF ++  
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
           KG+ P ++TYTV+I     +G L  A +   +M+  G  PN  TYN LI    R   +  
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTA 561

Query: 647 AYGLFIDMEEEGILPNKYTYTILIN 671
           +  L  +M+  G   +  +  ++I+
Sbjct: 562 SAKLIEEMKSCGFSADASSIKMVID 586



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/394 (25%), Positives = 172/394 (43%), Gaps = 35/394 (8%)

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
           DA   F EM+R   +P ++ ++       R+           +L    +   + T N +I
Sbjct: 71  DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           +  CR      A  +   ++  G  PD  T+  ++ G    G +S A    + M+  G Q
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           PD   Y + + G  + GDTS A  L  +M  +    D+ TY+ ++  LC+ G ++ A  L
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
            ++M   G     +TY S++    + G    G  L  +M+ + + P ++T+ VL+     
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYN--------------------------------- 632
            G+L+ A   + EM  +GI PN+ITYN                                 
Sbjct: 311 EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVT 370

Query: 633 --ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
             +LI G C ++R+D    +F ++ + G++ N  TY+IL+   C +G  + A  L++EM+
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430

Query: 691 DREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
              + PD  T+  LL    D      A+E  E L
Sbjct: 431 SHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/166 (22%), Positives = 75/166 (45%)

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           ++A  L ++M+    +P  + ++    A           D    +   G++  + T  ++
Sbjct: 70  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           I+      +   A+    ++   G  P+  T+N LI GL    ++ +A  L   M E G 
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189

Query: 660 LPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            P+  TY  ++N  C +G+   AL L ++M +R ++ D  T+S ++
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTII 235


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  271 bits (694), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 154/507 (30%), Positives = 276/507 (54%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K+  V++   +F++M+  GL PDV   N +I  L       KA  + + M + G+ P 
Sbjct: 210 FFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPD 269

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             TYN M+  +C  G+++EA+ LL +M G G  P+ VTY++LI  + + G   +AR +  
Sbjct: 270 TRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFD 329

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M++ G K ++  Y+ ++ GY+ KG L++  +L + M+  G+      +NILI    K G
Sbjct: 330 SMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHG 389

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            V  A   F EM +  + PD++SY+T+++  C++G + +A   F+++ S  L P ++++ 
Sbjct: 390 AVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFT 449

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           +LI GLC  G+ +  ++L   MIN+GI PD I    +++  CK G +  A++FF+ ++  
Sbjct: 450 SLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHI 509

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G++PD  +Y T I G   +G   E+ +  + M++ G  PD  TYN L++G  K G +E+A
Sbjct: 510 GVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDA 569

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             L R+M         IT   ++H   + G +   R+L+  M+ +G    + TY  ++  
Sbjct: 570 LALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGG 629

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
                 ++ A   F +++ K    +V T++ +IN L ++ RID+A  LF  M   G +P+
Sbjct: 630 LCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPD 689

Query: 663 KYTYTILINENCNAGNWQEALRLYKEM 689
             TY+++I  +   G  +E+  L+  M
Sbjct: 690 VITYSLMIKSHIEEGLLEESDNLFLSM 716



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 151/507 (29%), Positives = 267/507 (52%), Gaps = 2/507 (0%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYR-MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALE 264
           P+V + N +I      G   KA  ++  MMG+ G+ P +VTYN+++D  CK   M +A+ 
Sbjct: 198 PNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQ-GLPPDVVTYNSLIDGLCKAQAMDKAVA 256

Query: 265 LLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYS 324
           +L  M  +G  P+  TYN++I G+   G+LE+A  L++ M   GL+    +Y+ +I  Y 
Sbjct: 257 ILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYC 316

Query: 325 EKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDII 384
           + G   EA ++ + MV +G  P    Y+IL++G    G + D R     M+R  +  +  
Sbjct: 317 KIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHR 376

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
           ++N L+  Y + G + +A   F E+R   L P VV+Y+T+I  LC+ G +E A      M
Sbjct: 377 AFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQM 436

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
           +++G+ P++I++T +++G C +G      E   EM+ +G+ PD     T +    K G  
Sbjct: 437 VSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRV 496

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
            EA    + ++  G  PD+++YN L+ G C +G ++E+ + L +MV  G  PD  TY S+
Sbjct: 497 VEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSL 556

Query: 565 IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
           ++   + G +     L+  M RK +    +T  +++H     GR+  A   + +M  +G 
Sbjct: 557 LNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGT 616

Query: 625 RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
           +  + TYN ++ GLC    +D+A  +F D+  +    +  T++I+IN     G   EA  
Sbjct: 617 QLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKS 676

Query: 685 LYKEMLDREIEPDYCTHSALLLKQLDK 711
           L+  M+ R   PD  T+S ++   +++
Sbjct: 677 LFSAMVLRGPVPDVITYSLMIKSHIEE 703



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 154/498 (30%), Positives = 260/498 (52%), Gaps = 4/498 (0%)

Query: 212 NRIIKVLRDNGFSVKARE-VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQ 270
           N++IK L D   +  A + V+R M E G  P + +YN ++   C E + QEALELL  M 
Sbjct: 130 NQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMT 189

Query: 271 GRG---CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKG 327
             G   CSPN V+YN +I GF + GE+++A  L  +M+  GL     +YN +I G  +  
Sbjct: 190 ADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQ 249

Query: 328 LLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYN 387
            + +A+ + + M  +GV P   TYNI+I G C  G++ +A     +M    + PD+++Y+
Sbjct: 250 AMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYS 309

Query: 388 TLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
            L+  YC+ G   EA  +FD +  +   P    Y+ L+ G    G L   + L + MI  
Sbjct: 310 LLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRD 369

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
           GI  +   + I++    K G +  A   F EM + GL+PD  +Y+T I    K G   +A
Sbjct: 370 GIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDA 429

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
                +M+++G  P++I++  L+HGLC +G  ++  EL  +M+  G  PD I   +I+  
Sbjct: 430 VYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDN 489

Query: 568 SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
             + G +   +D F+ ++  G+ P +V+Y  LI  +   G+++ +      M   G+RP+
Sbjct: 490 LCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPD 549

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYK 687
             TYN+L+NG  +  R++ A  L+ +M  + +     T  I+++    AG    A  LY 
Sbjct: 550 SWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYM 609

Query: 688 EMLDREIEPDYCTHSALL 705
           +M+DR  +    T++ +L
Sbjct: 610 KMVDRGTQLRIETYNTVL 627



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 138/521 (26%), Positives = 249/521 (47%), Gaps = 35/521 (6%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   +++ + +   M   G++PD +  N +I+     G   +A  + + M   G++P +V
Sbjct: 247 KAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVV 306

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY+ ++  +CK G   EA  +   M  +G  PN   Y++L+ G++  G L   R L+  M
Sbjct: 307 TYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLM 366

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           ++ G+     ++N +IC Y++ G + +A+    EM   G+ P + +Y+ +I+ LCK GRV
Sbjct: 367 IRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRV 426

Query: 365 SDARHRF-----------------------------------FEMLRKNVIPDIISYNTL 389
            DA + F                                   FEM+ + + PD I  NT+
Sbjct: 427 EDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTI 486

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
           +   C+ G + EA   FD +    + P VV+YNTLIDG C  G ++ + +  + M++ G+
Sbjct: 487 MDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGL 546

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
            PD  TY  ++NG  K G +  A   + EM RK ++         + G  + G    A  
Sbjct: 547 RPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARE 606

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           L  +M+ +G    + TYN ++ GLC+   ++EA  +   +    F  D  T++ +I+A L
Sbjct: 607 LYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALL 666

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
           ++G +   + LF+ M+ +G  P ++TY+++I +H   G LE +   F  M+  G   +  
Sbjct: 667 KVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSH 726

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
             N ++  L     + +A      ++E+       T  +LI
Sbjct: 727 MLNIIVRRLLEKGDVRRAGTYLTKIDEKNFSLEASTAALLI 767



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 140/462 (30%), Positives = 217/462 (46%), Gaps = 48/462 (10%)

Query: 284 LITGFSRNGEL--EQARGLIRDMLKLGLKVSAHSYNPII-------CGYSEKGLLVEALN 334
           +I    R+G L  E A  L  ++L      S H++N ++          S +     A++
Sbjct: 18  IILNRHRSGSLGREDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVS 77

Query: 335 LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
           L   MV  GV    A   ILI   C  GR+  A   F   L+       ++ N L+ G C
Sbjct: 78  LFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLC 137

Query: 395 RSGNIGEAF-LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG---IL 450
                 +A  ++F  +      P V +YN LI GLC     + A +L  +M   G     
Sbjct: 138 DGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCS 197

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
           P+V++Y  +++G  K G +  A   F+EM+ +GL PD   Y + I G  K     +A  +
Sbjct: 198 PNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAI 257

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
            + M  KG  PD  TYN+++ G C LG LEEA  LL+KM G G  PD +TY+ +I    +
Sbjct: 258 LQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCK 317

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRL--------------------- 609
           +G     R +F++M+RKG  P    Y +L+H +A +G L                     
Sbjct: 318 IGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRA 377

Query: 610 --------------ELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
                         + A   F+EM+  G+RP+V++Y+ +I+ LC+  R++ A   F  M 
Sbjct: 378 FNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMV 437

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
            EG+ PN  ++T LI+  C+ G W++   L  EM++R I PD
Sbjct: 438 SEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPD 479



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 221/449 (49%), Gaps = 2/449 (0%)

Query: 152 CVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNC 211
           C     + D ++  G     +  I  +LL  Y  K  +     + + M+R+G+  + +  
Sbjct: 321 CAEARSVFDSMVRKGQKP--NSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAF 378

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
           N +I     +G   KA   +  M + G++P +V+Y+T++   CK G +++A+    +M  
Sbjct: 379 NILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVS 438

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
            G SPN +++  LI G    GE ++   L  +M+  G+   A   N I+    ++G +VE
Sbjct: 439 EGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVE 498

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
           A +  + ++  GV P + +YN LI G C  G++ ++  +   M+   + PD  +YN+LL 
Sbjct: 499 AQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLN 558

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
           GY ++G + +A  L+ E+  +++    +T N ++ GL + G +  A++L   M+++G   
Sbjct: 559 GYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQL 618

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
            + TY  ++ G C+   +  A   F ++  K  + D   ++  I   LK+G   EA  L 
Sbjct: 619 RIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLF 678

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
             M+ +G  PD+ITY++++    + G LEE++ L   M  +G   D      I+   LE 
Sbjct: 679 SAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEK 738

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           GD+RR       +  K  S    T  +LI
Sbjct: 739 GDVRRAGTYLTKIDEKNFSLEASTAALLI 767



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 106/251 (42%), Gaps = 15/251 (5%)

Query: 470 SMARE----FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSE-------AYRLQEEMLAKG 518
           S+ RE     F+E+L +       A+ + +    +   +S        A  L   M+  G
Sbjct: 27  SLGREDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMVRSG 86

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
                    +L+   C +G L+ A       +  G+   ++T   +I    +        
Sbjct: 87  VNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAM 146

Query: 579 DL-FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG---IRPNVITYNAL 634
           D+ F  M   G +P + +Y  LI       + + A      M   G     PNV++YN +
Sbjct: 147 DMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTV 206

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           I+G  +   +D+AY LF +M  +G+ P+  TY  LI+  C A    +A+ + + M D+ +
Sbjct: 207 IDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGV 266

Query: 695 EPDYCTHSALL 705
            PD  T++ ++
Sbjct: 267 MPDTRTYNIMI 277



 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 46/217 (21%), Positives = 94/217 (43%), Gaps = 9/217 (4%)

Query: 122 RDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLL 181
           R +  FC I   ++  GL ++   V    + + M       +  G    + I+  + +L 
Sbjct: 578 RKDVKFCAITSNIMLHGLFQAGRIVAARELYMKM-------VDRGTQ--LRIETYNTVLG 628

Query: 182 IYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKP 241
              + S V++ L +F  +       DV+  + +I  L   G   +A+ ++  M   G  P
Sbjct: 629 GLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVP 688

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
            ++TY+ M+ S  +EG ++E+  L   M+  GC+ +    N+++      G++ +A   +
Sbjct: 689 DVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYL 748

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
             + +    + A +   +I   SEK    E   L E+
Sbjct: 749 TKIDEKNFSLEASTAALLIPIVSEKKYQKEVKFLPEK 785


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  271 bits (694), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 191/673 (28%), Positives = 328/673 (48%), Gaps = 89/673 (13%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           AL FFRW++ +   K D F +  +L+ LI    L+ A  V E +V     G+    +  G
Sbjct: 113 ALTFFRWLQAR-NFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMV---AQGV----VPNG 164

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG---- 222
            +  V ++        Y + S  ++ +  F +M+  G  P      ++ + L+  G    
Sbjct: 165 FTYAVLVQSS-----CYERNS--DEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGE 217

Query: 223 FS-------------------------------VKAREVYRMMGEFGIKPSIVTYNTMLD 251
           FS                               ++A +++R M + G KP    Y+ M+ 
Sbjct: 218 FSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVL 277

Query: 252 SFCKEGEMQEALELLWEMQGRGCSP-NGVTYNVLITGFSRNGELEQA------------- 297
           + CK   + EA +L  EM     +P N V +   ++G  ++G++EQA             
Sbjct: 278 AHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSS 337

Query: 298 -----RGLIRDMLKLG---------LKVSAHSYNP-------IICGYSEKGLLVEALNLE 336
                  LIR +++ G         L+++  +  P       +I    + G +  AL+L 
Sbjct: 338 SQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLL 397

Query: 337 EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK--NVIPDIISYNTLLYGYC 394
           E M+ RG  P +AT+++LI  LCK  ++ +A+     M RK  +      SYN+LL   C
Sbjct: 398 ETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLC 457

Query: 395 RSGNIGEAFLLFDELRS-RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
           ++  + +AF +F  + S R+ VP VV+Y+ LIDG C+  +L  A++L + MI+   +P+V
Sbjct: 458 KAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNV 517

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
            TY   +NG  + G ++ A+  + EM+  G  PD   Y+T I G        +A+ L E 
Sbjct: 518 TTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFET 577

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           M+++G  P+ +TYN L+HGLCK    +EA+EL RKMV  G  PD +TYT++++    +G 
Sbjct: 578 MISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGK 637

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
           + +  ++F+ M+ KG  P +V Y  L+      G+   A   F  M  +  +P+ +++N 
Sbjct: 638 IEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNI 697

Query: 634 LINGLCRLRRIDQAYGLFIDMEEE-GILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
           +I+GL + +R+D A  +F  ME++ G  P+  TY  LI   C      EA++++KE+   
Sbjct: 698 MIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRL 757

Query: 693 EIEPDYCTHSALL 705
           ++ PD    + LL
Sbjct: 758 KLSPDPHAFNVLL 770



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 153/565 (27%), Positives = 267/565 (47%), Gaps = 76/565 (13%)

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
           +IK LRD G   +A   +R +     K  + TYN +LD   +  ++++A ++  +M  +G
Sbjct: 103 VIKHLRDGG---EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQG 159

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI-------------- 319
             PNG TY VL+         ++A     +M+  G K S+  Y  +              
Sbjct: 160 VVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFS 219

Query: 320 -ICGYS-----------EKGLLV---------EALNLEEEMVTRGVAPTLATYNILIYGL 358
            + G             +K LLV         EA  L   MV  G  P    Y+ ++   
Sbjct: 220 RVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAH 279

Query: 359 CKWGRVSDARHRFFEMLRKNVIP-DIISYNTLLYGYCRSGNIGEAF-------------- 403
           CK   + +A   F EM  ++  P + +++   L G C+SG I +AF              
Sbjct: 280 CKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQ 339

Query: 404 --------LLFD------------ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
                   LL +            E+  RN+ P+  T +++I  LC+ G ++ A  L E 
Sbjct: 340 PVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLET 399

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK--GLQPDRFAYTTQIAGELKL 501
           MI +G  PD+ T+++++N  CK   +  A+EF   M RK        F+Y + +    K 
Sbjct: 400 MIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKA 459

Query: 502 GDTSEAYRLQEEMLA-KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
               +A+ +   M++ + F PD+++Y++L+ G CK+  L  A +L ++M+    +P+  T
Sbjct: 460 KKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTT 519

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           Y + ++  +  G +   + ++  M+  G SP ++TY+ LIH  +   + + A   F  M 
Sbjct: 520 YNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMI 579

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
            +G RPN +TYN L++GLC+  + D+A+ LF  M E G  P++ TYT L+   CN G  +
Sbjct: 580 SRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIE 639

Query: 681 EALRLYKEMLDREIEPDYCTHSALL 705
           +A+ ++ EM+ +  +PD   ++ LL
Sbjct: 640 QAVEVFDEMVSKGHDPDVVAYNCLL 664



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/429 (29%), Positives = 218/429 (50%), Gaps = 4/429 (0%)

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
           +I++L ++G   KA E    +    I+PS  T ++++   CK G +  AL LL  M  RG
Sbjct: 345 LIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRG 404

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLK--LGLKVSAHSYNPIICGYSEKGLLVE 331
             P+  T+++LI    +  ++++A+  ++ M +       S  SYN ++    +   + +
Sbjct: 405 YCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQ 464

Query: 332 ALNLEEEMVT-RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
           A  +   MV+ R   P + +Y+ILI G CK   +  A   + +M+  N +P++ +YN  L
Sbjct: 465 AFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFL 524

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
            G  R G I +A  +++E+ +    P V+TY+TLI G       + A +L E MI++G  
Sbjct: 525 NGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCR 584

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
           P+ +TY  +++G CK      A E F +M+ +G  PDR  YTT + G   +G   +A  +
Sbjct: 585 PNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEV 644

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
            +EM++KG  PD++ YN L+ G  + G   EA +L + MV     PD +++  +I    +
Sbjct: 645 FDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSK 704

Query: 571 MGDLRRGRDLFNNMLRK-GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
              L    ++F  M +  G SP LVTY  LI       RL  A   F E+    + P+  
Sbjct: 705 AKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPH 764

Query: 630 TYNALINGL 638
            +N L+  +
Sbjct: 765 AFNVLLEAI 773



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 222/456 (48%), Gaps = 20/456 (4%)

Query: 117 QPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKIL 176
           Q  +   + V+  ++ +LIESG +  A        C+ + G  ++    G  +C S+ I 
Sbjct: 332 QESLSSSQPVYDMLIRLLIESGRIDKA-----EEACLEIAG-RNIQPSSG--TCHSV-IQ 382

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           +L      K   V+  L +   M++ G  PD+   + +I  L       +A+E  + M  
Sbjct: 383 EL-----CKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDR 437

Query: 237 --FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM-QGRGCSPNGVTYNVLITGFSRNGE 293
                  S  +YN++L+S CK  ++ +A  +   M   R   P+ V+Y++LI GF +  E
Sbjct: 438 KISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDE 497

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           L +A  L + M+ L    +  +YN  + G   KG + +A  + EEMV  G +P + TY+ 
Sbjct: 498 LGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYST 557

Query: 354 LIYGLCKWGRVSDARHRFFE-MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
           LI+G     R  D  H  FE M+ +   P+ ++YN LL+G C+     EA  LF ++  R
Sbjct: 558 LIHGF-SLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVER 616

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
              P  VTY TL+ G C  G +E A ++ + M+++G  PDV+ Y  ++ G  + G    A
Sbjct: 617 GCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEA 676

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK-GFPPDLITYNVLVH 531
           ++ F  M+ +  +PD  ++   I G  K     +A  + E M    G  PDL+TYN L+ 
Sbjct: 677 KQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIF 736

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
           GLC    L EA ++ +++      PD   +  ++ A
Sbjct: 737 GLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEA 772



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/326 (30%), Positives = 150/326 (46%), Gaps = 2/326 (0%)

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
           GEA   F  L++RN    V TYN L+D L R+ DL+ A Q+ E M+ QG++P+  TY ++
Sbjct: 111 GEALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVL 170

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           V  SC   N   A  FF EM+ KG +P    Y          G   E  R+    L K  
Sbjct: 171 VQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRV 230

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
             +++    L+          EA++L R MV  G  PD   Y+ ++ A  ++ +L     
Sbjct: 231 AVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFK 290

Query: 580 LFNNMLRKGLSP-TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           LF  M  +  +P   V +T  +      G++E AF     MQ + +  +   Y+ LI  L
Sbjct: 291 LFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQ-ESLSSSQPVYDMLIRLL 349

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
               RID+A    +++    I P+  T   +I E C AG    AL L + M+ R   PD 
Sbjct: 350 IESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDM 409

Query: 699 CTHSALLLKQLDKDYKVHAVEYLESL 724
            THS L+ +    D    A E+L+ +
Sbjct: 410 ATHSMLINELCKADKIQEAQEFLQGM 435



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/250 (32%), Positives = 131/250 (52%), Gaps = 11/250 (4%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSV-----KAREVYRMMGEFGI 239
           +K  +     V+ +M+  G  PDV   + +I     +GFS+     +A E++  M   G 
Sbjct: 529 RKGRIADAQGVYEEMVAAGCSPDVITYSTLI-----HGFSLARKHDQAHELFETMISRGC 583

Query: 240 KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
           +P+ VTYN +L   CKE +  EA EL  +M  RGC P+ VTY  L+ GF   G++EQA  
Sbjct: 584 RPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVE 643

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
           +  +M+  G      +YN ++ G+   G   EA  L + MV+R   P   ++NI+I GL 
Sbjct: 644 VFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLS 703

Query: 360 KWGRVSDARHRFFEMLRKN-VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           K  R+ DA   F  M + +   PD+++YN+L++G C    + EA  +F E+    L P  
Sbjct: 704 KAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDP 763

Query: 419 VTYNTLIDGL 428
             +N L++ +
Sbjct: 764 HAFNVLLEAI 773


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  271 bits (694), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 155/505 (30%), Positives = 256/505 (50%), Gaps = 5/505 (0%)

Query: 205 LPDVKNCNRIIKVLRDNGFSVKAREVYRMMG----EFGIKPSIVTYNTMLDSFCKEGEMQ 260
           LP  K    +++     G +   RE++  +       G K SIV ++ ++ S C      
Sbjct: 110 LPSPKPALHLLRQALGGGTTNSIREIFEFLAASRDRLGFKSSIV-FDYLIKSCCDMNRAD 168

Query: 261 EALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII 320
           EA E  + M+ +G  P   T N L++ F +    E A  L  +M +L +K S +++N +I
Sbjct: 169 EAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMI 228

Query: 321 CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
               ++G L +A +    M T GV P + TYN +++G C  GRV  A      M R+ + 
Sbjct: 229 NVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIE 288

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           PD  +Y +L+ G C+ G + EA  +F+E+  + L P+ V YNTLIDG C  G+L++A   
Sbjct: 289 PDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAY 348

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
           K+ M+ +GI P + TY  +++          A     E+  KG+ PD   Y   I G  +
Sbjct: 349 KDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCR 408

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
             +  +A+ L +EMLA G  P   TY  L+H L K   ++EA++L +K+  +G +PD I 
Sbjct: 409 CANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIM 468

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           + ++I       +++   +L  +M R  + P  VT+  ++  H   G++E A   F EM+
Sbjct: 469 FNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMK 528

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
            +GI+P+ I++N LI+G  R   I  A+ +  +M + G  P   TY  L+   C      
Sbjct: 529 RRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGD 588

Query: 681 EALRLYKEMLDREIEPDYCTHSALL 705
            A  L KEM+ + + PD  T+  L+
Sbjct: 589 LAEELLKEMVSKGMTPDDTTYFTLI 613



 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 156/565 (27%), Positives = 273/565 (48%), Gaps = 14/565 (2%)

Query: 90  PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVET 149
           P L+ + L  + E P++ L F      +     D    C  + I+      + A  ++  
Sbjct: 66  PSLISQTLLNLHESPQVVLDFLNHFHHKLS---DARTLCLAIVIVARLPSPKPALHLLRQ 122

Query: 150 VV----CVNMHGILDVLIGG----GLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLR 201
            +      ++  I + L       G  S +   + D L+      +  ++    F  M  
Sbjct: 123 ALGGGTTNSIREIFEFLAASRDRLGFKSSI---VFDYLIKSCCDMNRADEAFECFYTMKE 179

Query: 202 NGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQE 261
            G+LP ++ CN ++ +      +  A  +Y  M    IK S+ T+N M++  CKEG++++
Sbjct: 180 KGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKK 239

Query: 262 ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC 321
           A + +  M+  G  PN VTYN ++ G+  +G +E A  ++  M +  ++  + +Y  +I 
Sbjct: 240 AKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLIS 299

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           G  ++G L EA  + EEMV +G+ P+   YN LI G C  G +  A     EML+K + P
Sbjct: 300 GMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISP 359

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
            + +YN+L++         EA  +  E++ + + P  +TYN LI+G CR  + + A  L 
Sbjct: 360 TMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLH 419

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
           + M+  GI P   TYT +++   K   +  A + F ++  +G+ PD   +   I G    
Sbjct: 420 DEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSN 479

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
            +   A+ L ++M     PPD +T+N ++ G C+ G +EEA EL  +M   G  PDHI++
Sbjct: 480 SNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISF 539

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
            ++I      GD++    + N ML  G +PT++TY  L+         +LA     EM  
Sbjct: 540 NTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVS 599

Query: 622 KGIRPNVITYNALINGLCRLRRIDQ 646
           KG+ P+  TY  LI G+ ++   D+
Sbjct: 600 KGMTPDDTTYFTLIEGIAKVNIPDE 624



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 50/216 (23%), Positives = 102/216 (47%), Gaps = 14/216 (6%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G+K  +  + ++L +L +   ++ A  + + +      G+L   I           + + 
Sbjct: 426 GIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITS---EGVLPDAI-----------MFNA 471

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  +   S V+    +   M R  + PD    N I++     G   +ARE++  M   G
Sbjct: 472 LIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRG 531

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           IKP  +++NT++  + + G++++A  +  EM   G +P  +TYN L+ G  +N E + A 
Sbjct: 532 IKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAE 591

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
            L+++M+  G+     +Y  +I G ++  +  E  N
Sbjct: 592 ELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDENKN 627


>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 840

 Score =  271 bits (694), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 153/521 (29%), Positives = 268/521 (51%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           ++S  +  +L F         P V + N I+      GF   A+  + MM + G+ P   
Sbjct: 258 RQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAY 317

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           +YN ++   C  G M EAL+L  +M+  G  P+ VTYN+L  GF   G +  A  +I+ M
Sbjct: 318 SYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKM 377

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           L  G   +  +Y  +ICG+ + G + EAL L +EM++ G   ++ +  +L+  LCK  +V
Sbjct: 378 LIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQV 437

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
             A   F EM    + PD+I+Y+TL++G C+ G + +A LL++++ S  ++P  + +  +
Sbjct: 438 DVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAI 497

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           + GLC  G +  A+   + +I   +  D+I Y IM++G  K GN   A + + ++  KG+
Sbjct: 498 LMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGI 557

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            P    + + + G       S+A RL + +   G  P+ +TY  L++  C+ G+++   E
Sbjct: 558 SPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLE 617

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           LL +M      P HITYT +I    +   L+    L  +M   GL+P  V+Y  +I A  
Sbjct: 618 LLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFC 677

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
               +  AF  + +M +  + P  +TYN LING C    +  A  L + ++   +  NKY
Sbjct: 678 KARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKY 737

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            YT +I  +C  G+  +A+  +++M+++  E     +SA++
Sbjct: 738 AYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVI 778



 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 175/663 (26%), Positives = 322/663 (48%), Gaps = 42/663 (6%)

Query: 102 EKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHG---- 157
           E    A+ F+  +  + G +   F    +  +L     L     V++ ++     G    
Sbjct: 104 EDADSAVDFYYLLSNEFGFQHSRFSRLVVSHVLARKKRLNELRLVLDQMLLHEGSGSAPS 163

Query: 158 ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
           + ++L+G   S   S  + D+L   Y++ +MV   L V  KM     +  ++  N ++  
Sbjct: 164 LCELLLGSFRSWDSSNVVWDMLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYN 223

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
           LR +       +VY  +   G   S  T + ++D  C++   Q+A+    + +G+   P+
Sbjct: 224 LRHSNI---MWDVYNEIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPS 280

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
            V++N +++ + + G ++ A+     MLK GL   A+SYN +I G    G + EAL+L+ 
Sbjct: 281 VVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKN 340

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
           +M   G+ P + TYNIL  G    G ++ A +   +ML K   P++++Y  L+ G+C+ G
Sbjct: 341 DMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIG 400

Query: 398 NIGEA-----------------------------------FLLFDELRSRNLVPTVVTYN 422
           N+ EA                                   F LF E+ +  L P ++TY+
Sbjct: 401 NVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYS 460

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           TLI GLC+ G+++ A  L E M +  I+P+ + +  ++ G C+ G +S AR +F+ ++  
Sbjct: 461 TLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITS 520

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
            L  D   Y   I G +K G+T EA +L +++  KG  P ++T+N L++G C    L +A
Sbjct: 521 NLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQA 580

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             LL  +   G  P+ +TYT++++   E G+++   +L + M  K + PT +TYTV+I  
Sbjct: 581 RRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKG 640

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
              + +L+ +     +M   G+ P+ ++YN +I   C+ R + +A+ L+  M    + P 
Sbjct: 641 LCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPT 700

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLE 722
             TY ILIN  C  G+ ++A  L   + +R++  +   ++ ++     K     AV Y  
Sbjct: 701 SVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFR 760

Query: 723 SLT 725
            + 
Sbjct: 761 QMV 763



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 167/543 (30%), Positives = 267/543 (49%), Gaps = 35/543 (6%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K   V+     F  ML++GLLPD  + N +I  L   G   +A ++   M   G++P 
Sbjct: 291 YCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPD 350

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +VTYN +   F   G +  A  ++ +M  +G +PN VTY VLI G  + G +E+A  L +
Sbjct: 351 MVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYK 410

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M+  G ++S  S   ++    +   +  A  L  EM   G+ P L TY+ LI+GLCK G
Sbjct: 411 EMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQG 470

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            V  A   + +M    +IP+ + +  +L G C  G I +A + FD L + NL   ++ YN
Sbjct: 471 EVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYN 530

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            +IDG  + G+   A +L + +  +GI P ++T+  ++ G C    LS AR   + +   
Sbjct: 531 IMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLH 590

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           GL+P+   YTT +    + G+      L  EM AK   P  ITY V++ GLCK   L+E+
Sbjct: 591 GLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQES 650

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH- 601
            +LL  M   G  PD ++Y +II A  +  D+R+   L++ ML   L PT VTY +LI+ 
Sbjct: 651 CQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILING 710

Query: 602 ----------------------------------AHAARGRLELAFMYFSEMQVKGIRPN 627
                                             AH A+G ++ A +YF +M  KG   +
Sbjct: 711 FCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVS 770

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYK 687
           +  Y+A+I  LC+   + +A   F  M  +G+ P++  + +L+N     G+      L  
Sbjct: 771 IRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLA 830

Query: 688 EML 690
           EM+
Sbjct: 831 EMI 833



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 132/466 (28%), Positives = 233/466 (50%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +  KML  G  P++     +I      G   +A ++Y+ M   G + SI++   +L S C
Sbjct: 373 IIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLC 432

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K  ++  A +L  EM+  G  P+ +TY+ LI G  + GE++QA  L   M    +  ++ 
Sbjct: 433 KSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSL 492

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
            +  I+ G  EKG + +A    + ++T  ++  +  YNI+I G  K G   +A   + ++
Sbjct: 493 IHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQL 552

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
             K + P I+++N+L+YG+C +  + +A  L D ++   L P  VTY TL++  C  G++
Sbjct: 553 GEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNM 612

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           +   +L   M  + I P  ITYT+++ G CK   L  + +   +M   GL PD+ +Y T 
Sbjct: 613 QSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTI 672

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I    K  D  +A++L ++ML     P  +TYN+L++G C  G L++A+ LL  +     
Sbjct: 673 IQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKV 732

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
             +   YT+II A    GD+ +    F  M+ KG   ++  Y+ +I     R  +  A  
Sbjct: 733 NLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKY 792

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
           +F  M   G+ P+   +  L+N   +   ++  + L  +M + G L
Sbjct: 793 FFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSGWL 838



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/372 (32%), Positives = 203/372 (54%), Gaps = 2/372 (0%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K+  V+Q +L++ KM  N ++P+      I+  L + G   +AR  +  +    +   I+
Sbjct: 468 KQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDII 527

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
            YN M+D + K G  +EA++L  ++  +G SP  VT+N L+ GF  N +L QAR L+ D 
Sbjct: 528 LYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLL-DT 586

Query: 305 LKL-GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           +KL GL+ +A +Y  ++  Y E+G +   L L  EM  + + PT  TY ++I GLCK  +
Sbjct: 587 IKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWK 646

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           + ++     +M    + PD +SYNT++  +C++ ++ +AF L+D++   NL PT VTYN 
Sbjct: 647 LQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNI 706

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           LI+G C YGDL+ A  L  ++ N+ +  +   YT ++   C  G++  A  +F +M+ KG
Sbjct: 707 LINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKG 766

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
            +     Y+  I    K    +EA      ML+ G  PD   + VL++   + G L    
Sbjct: 767 FEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEF 826

Query: 544 ELLRKMVGDGFI 555
           ELL +M+  G++
Sbjct: 827 ELLAEMIKSGWL 838



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 112/441 (25%), Positives = 211/441 (47%), Gaps = 16/441 (3%)

Query: 79  VSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESG 138
           +S  FQ  +    +L+  L + R+   +A + F  +E   G++ D   + T++  L + G
Sbjct: 413 ISHGFQLSIISSTVLLGSLCKSRQ-VDVAFKLFCEMEAN-GLRPDLITYSTLIHGLCKQG 470

Query: 139 LLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNK 198
            ++ A  + E + C N   I + LI G +            L+   +K  + Q  + F+ 
Sbjct: 471 EVQQAILLYEKM-CSN-RIIPNSLIHGAI------------LMGLCEKGKISQARMYFDY 516

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           ++ + L  D+   N +I      G + +A ++Y+ +GE GI P+IVT+N+++  FC   +
Sbjct: 517 LITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRK 576

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           + +A  LL  ++  G  PN VTY  L+  +   G ++    L+ +M    +  +  +Y  
Sbjct: 577 LSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTV 636

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           +I G  ++  L E+  L E+M   G+ P   +YN +I   CK   +  A   + +ML  N
Sbjct: 637 VIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHN 696

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
           + P  ++YN L+ G+C  G++ +A  L   L++R +      Y T+I   C  GD++ A 
Sbjct: 697 LEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAV 756

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
                M+ +G    +  Y+ ++   CK   ++ A+ FF  ML  G+ PD+  +   +   
Sbjct: 757 VYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAF 816

Query: 499 LKLGDTSEAYRLQEEMLAKGF 519
            + G  +  + L  EM+  G+
Sbjct: 817 HQCGHLNSEFELLAEMIKSGW 837


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  271 bits (694), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 144/454 (31%), Positives = 250/454 (55%)

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
           + G +P+ +T++T+++  C EG + EALEL+  M   G  P+ +T N L+ G   +G+  
Sbjct: 151 KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA 210

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
           +A  LI  M++ G + +A +Y P++    + G    A+ L  +M  R +      Y+I+I
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
            GLCK G + +A + F EM  K +  +II+YN L+ G+C +G   +   L  ++  R + 
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 330

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P VVT++ LID   + G L  A++L + MI++GI PD ITYT +++G CK  +L  A + 
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 390

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
            + M+ KG  P+   +   I G  K     +   L  +M  +G   D +TYN L+ G C+
Sbjct: 391 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 450

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
           LG L  A EL ++MV     P+ +TY  ++    + G+  +  ++F  + +  +   +  
Sbjct: 451 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI 510

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           Y ++IH      +++ A+  F  + +KG++P V TYN +I GLC+   + +A  LF  ME
Sbjct: 511 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 570

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           E+G  P+ +TY ILI  +   G+  ++++L +E+
Sbjct: 571 EDGHAPDGWTYNILIRAHLGDGDATKSVKLIEEL 604



 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 150/530 (28%), Positives = 276/530 (52%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F  M+ +  LP V + +R+   +           + + M   GI  ++ T + M++ FC
Sbjct: 75  LFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFC 134

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           +  ++  A   + ++   G  PN +T++ LI G    G + +A  L+  M+++G K    
Sbjct: 135 RCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLI 194

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           + N ++ G    G   EA+ L ++MV  G  P   TY  ++  +CK G+ + A     +M
Sbjct: 195 TINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM 254

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
             +N+  D + Y+ ++ G C+ G++  AF LF+E+  + +   ++TYN LI G C  G  
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRW 314

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           +   +L  +MI + I P+V+T++++++   K G L  A E   EM+ +G+ PD   YT+ 
Sbjct: 315 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 374

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I G  K     +A ++ + M++KG  P++ T+N+L++G CK   +++  EL RKM   G 
Sbjct: 375 IDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 434

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
           + D +TY ++I    E+G L   ++LF  M+ + + P +VTY +L+      G  E A  
Sbjct: 435 VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALE 494

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F +++   +  ++  YN +I+G+C   ++D A+ LF  +  +G+ P   TY I+I   C
Sbjct: 495 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLC 554

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
             G   EA  L+++M +    PD  T++ L+   L       +V+ +E L
Sbjct: 555 KKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEEL 604



 Score =  251 bits (642), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 143/424 (33%), Positives = 225/424 (53%), Gaps = 1/424 (0%)

Query: 191 QCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTML 250
           + +L+ +KM+  G  P+      ++ V+  +G +  A E+ R M E  IK   V Y+ ++
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
           D  CK G +  A  L  EM+ +G + N +TYN+LI GF   G  +    L+RDM+K  + 
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 330

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
            +  +++ +I  + ++G L EA  L +EM+ RG+AP   TY  LI G CK   +  A   
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 390

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
              M+ K   P+I ++N L+ GYC++  I +   LF ++  R +V   VTYNTLI G C 
Sbjct: 391 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 450

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
            G L VA++L + M+++ + P+++TY I+++G C  G    A E F ++ +  ++ D   
Sbjct: 451 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI 510

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           Y   I G        +A+ L   +  KG  P + TYN+++ GLCK G L EA  L RKM 
Sbjct: 511 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 570

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
            DG  PD  TY  +I A L  GD  +   L   + R G S    T  ++I    + GRL+
Sbjct: 571 EDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDM-LSDGRLK 629

Query: 611 LAFM 614
            +F+
Sbjct: 630 KSFL 633



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 137/476 (28%), Positives = 231/476 (48%), Gaps = 35/476 (7%)

Query: 198 KMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG 257
           K+++ G  P+    + +I  L   G   +A E+   M E G KP ++T NT+++  C  G
Sbjct: 148 KIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSG 207

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
           +  EA+ L+ +M   GC PN VTY  ++    ++G+   A  L+R M +  +K+ A  Y+
Sbjct: 208 KEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 267

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            II G  + G L  A NL  EM  +G+   + TYNILI G C  GR  D      +M+++
Sbjct: 268 IIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 327

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
            + P++++++ L+  + + G + EA  L  E+  R + P  +TY +LIDG C+   L+ A
Sbjct: 328 KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 387

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
            Q+ + M+++G  P++ T+ I++NG CK   +    E F +M  +G+  D   Y T I G
Sbjct: 388 NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 447

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITY------------------------------- 526
             +LG  + A  L +EM+++  PP+++TY                               
Sbjct: 448 FCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 507

Query: 527 ----NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
               N+++HG+C    +++A +L   +   G  P   TY  +I    + G L     LF 
Sbjct: 508 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFR 567

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
            M   G +P   TY +LI AH   G    +     E++  G   +  T   +I+ L
Sbjct: 568 KMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 102/397 (25%), Positives = 173/397 (43%), Gaps = 62/397 (15%)

Query: 106 IALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGIL------ 159
           +A+   R +E +  +K D   +  I++ L + G L +A+ +   +    M GI       
Sbjct: 246 LAMELLRKME-ERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM---EMKGITTNIITY 301

Query: 160 DVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLR 219
           ++LIGG                 +      +    +   M++  + P+V   + +I    
Sbjct: 302 NILIGG-----------------FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFV 344

Query: 220 DNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGV 279
             G   +A E+++ M   GI P  +TY +++D FCKE  + +A +++  M  +GC PN  
Sbjct: 345 KEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIR 404

Query: 280 TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
           T+N+LI G+ +   ++    L R M   G+     +YN +I G+ E G L  A  L +EM
Sbjct: 405 TFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEM 464

Query: 340 VTRGVAPTLATY-----------------------------------NILIYGLCKWGRV 364
           V+R V P + TY                                   NI+I+G+C   +V
Sbjct: 465 VSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 524

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            DA   F  +  K V P + +YN ++ G C+ G + EA LLF ++      P   TYN L
Sbjct: 525 DDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNIL 584

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           I      GD   + +L E +   G   D  T  ++++
Sbjct: 585 IRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID 621


>gi|186478651|ref|NP_173362.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806505|sp|Q9LN69.2|PPR50_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g19290
 gi|332191705|gb|AEE29826.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 904

 Score =  271 bits (694), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 182/618 (29%), Positives = 311/618 (50%), Gaps = 3/618 (0%)

Query: 77  RWVSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIE 136
           R+ + H  ++    ELL  +L R+R  P   L  F     Q   + D   +C ++ IL  
Sbjct: 57  RYEALHDLSLDFSDELLNSILRRLRLNPEACLEIFNLASKQQKFRPDYKAYCKMVHILSR 116

Query: 137 SGLLRSAYWVVETVVCVNMHG--ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLL 194
           +   +     +  +V +N  G  +   L+        S  + D++L +Y +K +V+  L 
Sbjct: 117 ARNYQQTKSYLCELVALNHSGFVVWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALH 176

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           VF+ M   G +P + +CN ++  L   G +  A  VY  M  F + P + T + +++++C
Sbjct: 177 VFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYC 236

Query: 255 KEGEMQEALELLWEMQGR-GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           + G + +A+    E +   G   N VTYN LI G++  G++E    ++R M + G+  + 
Sbjct: 237 RSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNV 296

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
            +Y  +I GY +KGL+ EA ++ E +  + +      Y +L+ G C+ G++ DA      
Sbjct: 297 VTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDN 356

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M+   V  +    N+L+ GYC+SG + EA  +F  +   +L P   TYNTL+DG CR G 
Sbjct: 357 MIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGY 416

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           ++ A +L + M  + ++P V+TY I++ G  ++G        +  ML++G+  D  + +T
Sbjct: 417 VDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCST 476

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            +    KLGD +EA +L E +LA+G   D IT NV++ GLCK+  + EA E+L  +    
Sbjct: 477 LLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFR 536

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
             P   TY ++ H   ++G+L+    +   M RKG+ PT+  Y  LI        L    
Sbjct: 537 CKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVA 596

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
               E++ +G+ P V TY ALI G C +  ID+AY    +M E+GI  N    + + N  
Sbjct: 597 DLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSL 656

Query: 674 CNAGNWQEALRLYKEMLD 691
                  EA  L ++++D
Sbjct: 657 FRLDKIDEACLLLQKIVD 674



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 180/628 (28%), Positives = 304/628 (48%), Gaps = 65/628 (10%)

Query: 85  AVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAY 144
           A++ D E + RVL  + E+               GV R+   + ++++   + GL+  A 
Sbjct: 272 AMIGDVEGMTRVLRLMSER---------------GVSRNVVTYTSLIKGYCKKGLMEEAE 316

Query: 145 WVVET------VVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNK 198
            V E       V   +M+G   VL+ G                 Y +   +   + V + 
Sbjct: 317 HVFELLKEKKLVADQHMYG---VLMDG-----------------YCRTGQIRDAVRVHDN 356

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           M+  G+  +   CN +I     +G  V+A +++  M ++ +KP   TYNT++D +C+ G 
Sbjct: 357 MIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGY 416

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           + EAL+L  +M  +   P  +TYN+L+ G+SR G       L + MLK G+     S + 
Sbjct: 417 VDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCST 476

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           ++    + G   EA+ L E ++ RG+     T N++I GLCK  +V++A+     +    
Sbjct: 477 LLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFR 536

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
             P + +Y  L +GY + GN+ EAF + + +  + + PT+  YNTLI G  +Y  L    
Sbjct: 537 CKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVA 596

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
            L   +  +G+ P V TY  ++ G C +G +  A     EM+ KG+  +     ++IA  
Sbjct: 597 DLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLN-VNICSKIANS 655

Query: 499 L-KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE---LLRKMVGDG- 553
           L +L    EA  L ++         ++ +++L+ G   L    EA+    L  + + +  
Sbjct: 656 LFRLDKIDEACLLLQK---------IVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESV 706

Query: 554 --------FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG-LSPTLVTYTVLIHAHA 604
                    +P++I Y   I    + G L   R LF+++L      P   TYT+LIH  A
Sbjct: 707 ENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCA 766

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
             G +  AF    EM +KGI PN++TYNALI GLC+L  +D+A  L   + ++GI PN  
Sbjct: 767 IAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAI 826

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDR 692
           TY  LI+    +GN  EA+RL ++M+++
Sbjct: 827 TYNTLIDGLVKSGNVAEAMRLKEKMIEK 854



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 130/480 (27%), Positives = 235/480 (48%), Gaps = 16/480 (3%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           ++   ++LL  Y++       L ++  ML+ G+  D  +C+ +++ L   G   +A +++
Sbjct: 435 TVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLW 494

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             +   G+    +T N M+   CK  ++ EA E+L  +    C P   TY  L  G+ + 
Sbjct: 495 ENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKV 554

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G L++A  +   M + G+  +   YN +I G  +   L +  +L  E+  RG+ PT+ATY
Sbjct: 555 GNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATY 614

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
             LI G C  G +  A    FEM+ K +  ++   + +     R   I EA LL  ++  
Sbjct: 615 GALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVD 674

Query: 412 RN-LVPTVVTYNTLIDGLCR--YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
            + L+P   +    ++          ++A+ ++ +   + ++P+ I Y + + G CK G 
Sbjct: 675 FDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGK 734

Query: 469 LSMAREFFNEMLRKG-LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
           L  AR+ F+++L      PD + YT  I G    GD ++A+ L++EM  KG  P+++TYN
Sbjct: 735 LEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYN 794

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
            L+ GLCKLG+++ A  LL K+   G  P+ ITY ++I   ++ G++     L   M+ K
Sbjct: 795 ALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEK 854

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
           G          L+     +G +++      + +VK     VI  N+  N L  +RR+ +A
Sbjct: 855 G----------LVRGSDKQGDVDIPKEVVLDPEVKLGSTGVIEMNS--NELYDVRRVSEA 902



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 171/362 (47%), Gaps = 3/362 (0%)

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
           +PT+  +++++    + G V +A H F  M     IP ++S N+LL    R G    A  
Sbjct: 154 SPTV--FDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALH 211

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL-KENMINQGILPDVITYTIMVNGS 463
           ++D++ S  + P V T + +++  CR G+++ A    KE   + G+  +V+TY  ++NG 
Sbjct: 212 VYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGY 271

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
             +G++         M  +G+  +   YT+ I G  K G   EA  + E +  K    D 
Sbjct: 272 AMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQ 331

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
             Y VL+ G C+ G + +A  +   M+  G   +     S+I+   + G L     +F+ 
Sbjct: 332 HMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSR 391

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           M    L P   TY  L+  +   G ++ A     +M  K + P V+TYN L+ G  R+  
Sbjct: 392 MNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGA 451

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSA 703
                 L+  M + G+  ++ + + L+      G++ EA++L++ +L R +  D  T + 
Sbjct: 452 FHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNV 511

Query: 704 LL 705
           ++
Sbjct: 512 MI 513


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  271 bits (693), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 142/412 (34%), Positives = 235/412 (57%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V + +++ ++M+ NG  PDV   N I+  +  +G +  A ++ R M E  +K  + TY+T
Sbjct: 164 VSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYST 223

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++DS C++G +  A+ L  EM+ +G   + VTYN L+ G  + G+      L++DM+   
Sbjct: 224 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 283

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           +  +  ++N ++  + ++G L EA  L +EM+TRG++P + TYN L+ G C   R+S+A 
Sbjct: 284 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 343

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
           +    M+R    PDI+++ +L+ GYC    + +   +F  +  R LV   VTY+ L+ G 
Sbjct: 344 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 403

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G +++A++L + M++ G+LPDV+TY I+++G C  G L  A E F ++ +  +    
Sbjct: 404 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 463

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             YTT I G  K G   +A+ L   +  KG  P+++TY V++ GLCK GSL EAN LLRK
Sbjct: 464 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 523

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           M  DG  P+  TY ++I A L  GDL     L   M   G S    +  ++I
Sbjct: 524 MEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 575



 Score =  265 bits (678), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 149/501 (29%), Positives = 266/501 (53%), Gaps = 2/501 (0%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +  + +F +M+R+  LP + + +R    + R   F++   +  + +   GI  +I T N 
Sbjct: 60  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNL-VLDFCKQLELNGIAHNIYTLNI 118

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           M++ FC+  +   A  +L ++   G  P+  T+N LI G    G++ +A  L+  M++ G
Sbjct: 119 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 178

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            +    +YN I+ G    G    AL+L  +M  R V   + TY+ +I  LC+ G +  A 
Sbjct: 179 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 238

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F EM  K +   +++YN+L+ G C++G   +  LL  ++ SR +VP V+T+N L+D  
Sbjct: 239 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 298

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
            + G L+ A +L + MI +GI P++ITY  +++G C    LS A    + M+R    PD 
Sbjct: 299 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 358

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             +T+ I G   +    +  ++   +  +G   + +TY++LV G C+ G ++ A EL ++
Sbjct: 359 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 418

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           MV  G +PD +TY  ++    + G L +  ++F ++ +  +   +V YT +I      G+
Sbjct: 419 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK 478

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           +E A+  F  +  KG++PNV+TY  +I+GLC+   + +A  L   MEE+G  PN  TY  
Sbjct: 479 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNT 538

Query: 669 LINENCNAGNWQEALRLYKEM 689
           LI  +   G+   + +L +EM
Sbjct: 539 LIRAHLRDGDLTASAKLIEEM 559



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 137/492 (27%), Positives = 262/492 (53%), Gaps = 3/492 (0%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PS+V ++    +  +  +    L+   +++  G + N  T N++I  F R  +   A  +
Sbjct: 76  PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 135

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  ++KLG +    ++N +I G   +G + EA+ L + MV  G  P + TYN ++ G+C+
Sbjct: 136 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 195

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G  S A     +M  +NV  D+ +Y+T++   CR G I  A  LF E+ ++ +  +VVT
Sbjct: 196 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 255

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YN+L+ GLC+ G       L ++M+++ I+P+VIT+ ++++   K G L  A E + EM+
Sbjct: 256 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 315

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            +G+ P+   Y T + G       SEA  + + M+     PD++T+  L+ G C +  ++
Sbjct: 316 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 375

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           +  ++ R +   G + + +TY+ ++    + G ++   +LF  M+  G+ P ++TY +L+
Sbjct: 376 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 435

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                 G+LE A   F ++Q   +   ++ Y  +I G+C+  +++ A+ LF  +  +G+ 
Sbjct: 436 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 495

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQL-DKDYKVHA-- 717
           PN  TYT++I+  C  G+  EA  L ++M +    P+ CT++ L+   L D D    A  
Sbjct: 496 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKL 555

Query: 718 VEYLESLTLGAE 729
           +E ++S    A+
Sbjct: 556 IEEMKSCGFSAD 567



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 134/445 (30%), Positives = 237/445 (53%), Gaps = 3/445 (0%)

Query: 230 VYRMMGE---FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
            Y ++G+    G +P   T+NT++     EG++ EA+ L+  M   GC P+ VTYN ++ 
Sbjct: 132 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 191

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G  R+G+   A  L+R M +  +K    +Y+ II      G +  A++L +EM T+G+  
Sbjct: 192 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 251

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
           ++ TYN L+ GLCK G+ +D      +M+ + ++P++I++N LL  + + G + EA  L+
Sbjct: 252 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 311

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
            E+ +R + P ++TYNTL+DG C    L  A  + + M+     PD++T+T ++ G C +
Sbjct: 312 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 371

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
             +    + F  + ++GL  +   Y+  + G  + G    A  L +EM++ G  PD++TY
Sbjct: 372 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 431

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
            +L+ GLC  G LE+A E+   +         + YT+II    + G +    +LF ++  
Sbjct: 432 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 491

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
           KG+ P ++TYTV+I     +G L  A +   +M+  G  PN  TYN LI    R   +  
Sbjct: 492 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTA 551

Query: 647 AYGLFIDMEEEGILPNKYTYTILIN 671
           +  L  +M+  G   +  +  ++I+
Sbjct: 552 SAKLIEEMKSCGFSADASSIKMVID 576



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/394 (25%), Positives = 172/394 (43%), Gaps = 35/394 (8%)

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
           DA   F EM+R   +P ++ ++       R+           +L    +   + T N +I
Sbjct: 61  DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 120

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           +  CR      A  +   ++  G  PD  T+  ++ G    G +S A    + M+  G Q
Sbjct: 121 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 180

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           PD   Y + + G  + GDTS A  L  +M  +    D+ TY+ ++  LC+ G ++ A  L
Sbjct: 181 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 240

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
            ++M   G     +TY S++    + G    G  L  +M+ + + P ++T+ VL+     
Sbjct: 241 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 300

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYN--------------------------------- 632
            G+L+ A   + EM  +GI PN+ITYN                                 
Sbjct: 301 EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVT 360

Query: 633 --ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
             +LI G C ++R+D    +F ++ + G++ N  TY+IL+   C +G  + A  L++EM+
Sbjct: 361 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 420

Query: 691 DREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
              + PD  T+  LL    D      A+E  E L
Sbjct: 421 SHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 454



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/166 (22%), Positives = 75/166 (45%)

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           ++A  L ++M+    +P  + ++    A           D    +   G++  + T  ++
Sbjct: 60  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 119

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           I+      +   A+    ++   G  P+  T+N LI GL    ++ +A  L   M E G 
Sbjct: 120 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 179

Query: 660 LPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            P+  TY  ++N  C +G+   AL L ++M +R ++ D  T+S ++
Sbjct: 180 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTII 225



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 89/414 (21%), Positives = 171/414 (41%), Gaps = 51/414 (12%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGIL-DVLI-- 163
            ++ FR + ++ G+  +   +  +++   +SG ++ A  + + +V    HG+L DV+   
Sbjct: 377 GMKVFRNI-SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS---HGVLPDVMTYG 432

Query: 164 --------GGGLSSCVSI------KILDLLLLIYT-------KKSMVEQCLLVFNKMLRN 202
                    G L   + I        +DL +++YT       K   VE    +F  +   
Sbjct: 433 ILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCK 492

Query: 203 GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           G+ P+V     +I  L   G   +A  + R M E G  P+  TYNT++ +  ++G++  +
Sbjct: 493 GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTAS 552

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
            +L+ EM+  G S +  +  ++I              + R  L+  L   + S   ++  
Sbjct: 553 AKLIEEMKSCGFSADASSIKMVIDML--------LSAMKRLTLRYCLSKGSKSRQDLLEL 604

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH-RFFEMLRKNVIP 381
              + + + +L   +      +  +L    I   G+       D R  R   +L+K    
Sbjct: 605 SGSEKIRLSSLTFVKMFPCNTITTSLNVNTIEARGMNSAELNRDLRKLRRSSVLKKFKNR 664

Query: 382 DI---ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG---DLE 435
           D+   ++   L +G        E  L+ D      L    V Y      + R G    + 
Sbjct: 665 DVRVLVTNELLTWGL----EDAECDLMVD----LELPTDAVHYAHRAGRMRRPGRKMTVV 716

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
            A++L + MI +GI P+ ITY+ +++G CK   L  A +  + M+ KG    R+
Sbjct: 717 TAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKGDSDIRY 770



 Score = 47.4 bits (111), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 30/47 (63%)

Query: 507 AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
           A  L +EM+ +G  P+ ITY+ L+ G CK   L+EAN++L  MV  G
Sbjct: 718 AEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG 764


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  271 bits (693), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 146/540 (27%), Positives = 281/540 (52%), Gaps = 8/540 (1%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE----FGIKPSIV 244
           +++ + +F +M+++   P +   ++++  +      +K  ++    GE     G+  ++ 
Sbjct: 46  LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIA----KMKKFDLVISFGEKMEILGVSHNLY 101

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TYN M++  C+  ++  AL +L +M   G  P+ VT N L+ GF     + +A  L+  M
Sbjct: 102 TYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 161

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           +++G +    ++  ++ G  +     EA+ L E MV +G  P L TY  +I GLCK G  
Sbjct: 162 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 221

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
             A +   +M +  +  D++ Y+T++   C+  ++ +A  LF E+ ++ + P V TY++L
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           I  LC YG    A +L  +M+ + I P+V+T+  +++   K G L  A + F+EM+++ +
Sbjct: 282 ISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            P+   Y + I G        EA ++   M++K   PD++TYN L++G CK   + +  E
Sbjct: 342 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGME 401

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           L R M   G + + +TYT++IH   +  D    + +F  M+  G+ P ++TY  L+    
Sbjct: 402 LFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 461

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
             G+LE A + F  +Q   + P++ TYN +  G+C+  +++  + LF  +  +G+ P+  
Sbjct: 462 KNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 521

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
            Y  +I+  C  G  +EA  L+ +M +    PD  T++ L+   L    K  + E ++ +
Sbjct: 522 AYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581



 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 154/498 (30%), Positives = 252/498 (50%), Gaps = 18/498 (3%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           ++S +   L +  KM++ G  P +   N ++          +A  +   M E G +P  V
Sbjct: 112 RRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTV 171

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           T+ T++    +  +  EA+ L+  M  +GC P+ VTY  +I G  + GE + A  L+  M
Sbjct: 172 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 231

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
            K  ++     Y+ +I    +   + +ALNL  EM  +G+ P + TY+ LI  LC +GR 
Sbjct: 232 EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 291

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
           SDA     +ML + + P+++++N+L+  + + G + EA  LFDE+  R++ P +VTYN+L
Sbjct: 292 SDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSL 351

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           I+G C +  L+ AQQ+   M+++  LPDV+TY  ++NG CK   +    E F +M R+GL
Sbjct: 352 INGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGL 411

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
             +   YTT I G  +  D   A  + ++M++ G  P+++TYN L+ GLCK G LE+A  
Sbjct: 412 VGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMV 471

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           +   +      PD  TY  +     + G +  G DLF ++  KG+ P ++ Y  +I    
Sbjct: 472 VFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFC 531

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALING------------------LCRLRRIDQ 646
            +G  E A+  F +M+  G  P+  TYN LI                     CR      
Sbjct: 532 KKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDAS 591

Query: 647 AYGLFIDMEEEGILPNKY 664
            YGL  DM  +G L   +
Sbjct: 592 TYGLVTDMLHDGRLDKGF 609



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/483 (27%), Positives = 240/483 (49%), Gaps = 35/483 (7%)

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
           ++ EA++L  EM      P+ V ++ L++  ++  + +        M  LG+  + ++YN
Sbjct: 45  KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            +I     +  L  AL +  +M+  G  P++ T N L+ G C   R+S+A     +M+  
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
              PD +++ TL++G  +     EA  L + +  +   P +VTY  +I+GLC+ G+ ++A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA- 496
             L   M    I  DV+ Y+ +++  CK  ++  A   F EM  KG++PD F Y++ I+ 
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284

Query: 497 ----------------------------------GELKLGDTSEAYRLQEEMLAKGFPPD 522
                                                K G   EA +L +EM+ +   P+
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
           ++TYN L++G C    L+EA ++   MV    +PD +TY ++I+   +   +  G +LF 
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
           +M R+GL    VTYT LIH        + A M F +M   G+ PN++TYN L++GLC+  
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
           ++++A  +F  +++  + P+ YTY I+    C AG  ++   L+  +  + ++PD   ++
Sbjct: 465 KLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYN 524

Query: 703 ALL 705
            ++
Sbjct: 525 TMI 527



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 86/175 (49%), Gaps = 6/175 (3%)

Query: 552 DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLEL 611
           DG+  + ++  +++H  L+        DLF  M++    P++V ++ L+ A A   + +L
Sbjct: 30  DGY-REKLSRNALLHLKLD-----EAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDL 83

Query: 612 AFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
              +  +M++ G+  N+ TYN +IN LCR  ++  A  +   M + G  P+  T   L+N
Sbjct: 84  VISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLN 143

Query: 672 ENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
             C+     EA+ L  +M++   +PD  T + L+      +    AV  +E + +
Sbjct: 144 GFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVV 198


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 154/472 (32%), Positives = 253/472 (53%), Gaps = 7/472 (1%)

Query: 220 DNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGV 279
           D GFSV A+ ++++    G +P   T+ T++   C EG++ EAL L  +M G G  PNGV
Sbjct: 126 DFGFSVLAK-IFKL----GHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGV 180

Query: 280 TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII-CGYSEKGLLVEALNLEEE 338
           TY  LI G  + G    A  L+R M++   + +  +YN II C + ++ +  EALN+  E
Sbjct: 181 TYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQV-NEALNIFSE 239

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
           M+ +G++P ++TYN +I+GLCK+           EM+   ++P+++ + TL+   C+ G 
Sbjct: 240 MIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGM 299

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           +  A  + D +  R + P VVTY  L+DG C   +++ A ++ + M+ +G  P+VI+Y+ 
Sbjct: 300 VTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYST 359

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           ++NG CK+  +  A   F EM ++ L P+   Y T I G   +G   +A  L  EM+A G
Sbjct: 360 LINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASG 419

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
             PDL+TY +L+  LCK   L++A  +L+ + G    PD  +Y  +I     +G+L    
Sbjct: 420 QIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAG 479

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           DLF+++  KGL P + TYT++I+    +G L  A   F EM   G  P+  TYN +  G 
Sbjct: 480 DLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGF 539

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
            R      A  L  +M   G   +  T T+++    + G  Q   ++  E +
Sbjct: 540 LRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQILHEFV 591



 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 142/484 (29%), Positives = 260/484 (53%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PS+V +  +L S          L L  +M   G   +  T  ++I  F     ++    +
Sbjct: 72  PSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSV 131

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  + KLG +    ++  +I G   +G + EAL+L ++MV  G  P   TY  LI+GLCK
Sbjct: 132 LAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCK 191

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G    A      M++KN  P++I+YNT++    +   + EA  +F E+ ++ + P V T
Sbjct: 192 VGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVST 251

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YN++I GLC++ + +    L   M++  I+P+V+ +T +V+  CK G +++A +  + M+
Sbjct: 252 YNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMI 311

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           ++G++PD   YT  + G     +  EA ++ + M+ KG  P++I+Y+ L++G CK+  ++
Sbjct: 312 QRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRID 371

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           +A  L  +M     +P+ +TY ++IH    +G LR    LF+ M+  G  P LVTY +L+
Sbjct: 372 KAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILL 431

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                   L+ A      ++   + P++ +YN +I+G+CR+  ++ A  LF  +  +G+ 
Sbjct: 432 DYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLH 491

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
           P+ +TYTI+IN  C  G   EA +L++EM      PD CT++ +    L  +  + A++ 
Sbjct: 492 PDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQL 551

Query: 721 LESL 724
           L+ +
Sbjct: 552 LQEM 555



 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 155/524 (29%), Positives = 267/524 (50%), Gaps = 1/524 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +++ L  FN+ML     P V +  +I+  + +         + + M   GI   + T   
Sbjct: 55  IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAI 114

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++SFC    +     +L ++   G  P+  T+  LI G    G++ +A  L   M+  G
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            + +  +Y  +I G  + G    A+ L   MV +   P + TYN +I  L K  +V++A 
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEAL 234

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
           + F EM+ K + P++ +YN++++G C+         L +E+    ++P VV + TL+D L
Sbjct: 235 NIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDAL 294

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G + +A  + + MI +G+ PDV+TYT +++G C    +  A + F+ M+RKG  P+ 
Sbjct: 295 CKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNV 354

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
            +Y+T I G  K+    +A  L EEM  +   P+++TYN L+HGLC +G L +A  L  +
Sbjct: 355 ISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHE 414

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           MV  G IPD +TY  ++    +   L +   +   +    L+P + +Y ++I      G 
Sbjct: 415 MVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGE 474

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           LE A   FS +  KG+ P+V TY  +INGLC    + +A  LF +M  +G  P+  TY +
Sbjct: 475 LEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNL 534

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
           +            A++L +EML R    D  T + L+++ L  D
Sbjct: 535 ITRGFLRNNETLSAIQLLQEMLGRGFSADASTIT-LIVEMLSDD 577



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 168/362 (46%), Gaps = 27/362 (7%)

Query: 87  VSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWV 146
           VS    ++  L +  E   +A      V+++  +  +  +F T+++ L + G++  A   
Sbjct: 249 VSTYNSIIHGLCKFSEWKHVATLMNEMVDSK--IMPNVVIFTTLVDALCKEGMVTIA--- 303

Query: 147 VETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLP 206
                    H ++DV+I  G+     +     L+  +  +S +++   VF+ M+R G  P
Sbjct: 304 ---------HDVVDVMIQRGVEP--DVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAP 352

Query: 207 DVKNCNRIIKVLRDNGFSV-----KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQE 261
           +V + + +I     NG+       KA  ++  M +  + P+IVTYNT++   C  G +++
Sbjct: 353 NVISYSTLI-----NGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRD 407

Query: 262 ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC 321
           A+ L  EM   G  P+ VTY +L+    +   L+QA  +++ +    L     SYN +I 
Sbjct: 408 AIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVID 467

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           G    G L  A +L   + ++G+ P + TY I+I GLC  G +++A   F EM      P
Sbjct: 468 GMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSP 527

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG-DLEVAQQL 440
           D  +YN +  G+ R+     A  L  E+  R       T   +++ L   G D  V Q L
Sbjct: 528 DDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQIL 587

Query: 441 KE 442
            E
Sbjct: 588 HE 589



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 55/112 (49%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F+ +   GL PDV     +I  L   G   +A +++R M   G  P   TYN +   F 
Sbjct: 481 LFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFL 540

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
           +  E   A++LL EM GRG S +  T  +++   S +G  +  + ++ + ++
Sbjct: 541 RNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQILHEFVQ 592


>gi|218193284|gb|EEC75711.1| hypothetical protein OsI_12542 [Oryza sativa Indica Group]
          Length = 1031

 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 170/577 (29%), Positives = 278/577 (48%), Gaps = 73/577 (12%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +   ML +G+ PDV   + +I  +   G   + +E+   M + G+ P+ V Y T++  FC
Sbjct: 411 ILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFC 470

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K G  +EAL+   ++   G   N V +N L+  F R G + +A    + M ++ +     
Sbjct: 471 KAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVA 530

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           S+N II  Y ++G ++EA ++ + MV  G  P + TY  L+ GLC+ G +  A+     +
Sbjct: 531 SFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYL 590

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           L K    D  + NTLL G C+ G + EA  L +++ +RN++P   TY  L+DG C+ G +
Sbjct: 591 LEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKI 650

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML-RKGLQPDRFAYTT 493
             A  L + M+ +G++PD I YT ++NG    G +  A   F E++ ++GL  D  AY +
Sbjct: 651 VPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNS 710

Query: 494 QIAGELKLGDTSEAYRLQ-----------------------------------EEMLAKG 518
            + G LK G  +E  RL                                     +M+ +G
Sbjct: 711 MMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEG 770

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMV--GDGFIPDHITYTSIIHASLEMGDLRR 576
             PD +TY +L+ GLC+ G +E A + L KMV    G  P H  Y ++I+A   +GD+  
Sbjct: 771 IKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCRVGDIDG 830

Query: 577 GRDL-----------------------------------FNNMLRKGLSPTLVTYTVLIH 601
             +L                                   F++++R G+ PT+ T+T L+H
Sbjct: 831 AFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMH 890

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
                 +++ AF     M+  G++ +V+TYN LI GLC  + I  A  L+ +M+ +G+LP
Sbjct: 891 GLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLP 950

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
           N  TY  L       G  Q+  +L K++ DR I P Y
Sbjct: 951 NITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPSY 987



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 171/643 (26%), Positives = 287/643 (44%), Gaps = 96/643 (14%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y KK   +  L + + M +NG+  D+   N +I  L     S +A  + + M E  + P 
Sbjct: 274 YVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPD 333

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG---------- 292
             +YNT++  F  EG++  A+ +  +M  +   P+  TY  LI G+ RNG          
Sbjct: 334 ECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLY 393

Query: 293 ----------ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
                     E+ +A+ +++ ML  G+     +Y+ +I G  + G++ E   +   M   
Sbjct: 394 EMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKS 453

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP--------------------- 381
           GV P    Y  L++  CK G   +A   F ++ R  ++                      
Sbjct: 454 GVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEA 513

Query: 382 --------------DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY------ 421
                         D+ S+N ++  YC+ GN+ EAF ++D +      P + TY      
Sbjct: 514 EQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRG 573

Query: 422 -----------------------------NTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
                                        NTL+ G+C++G L+ A  L E M+ + ILPD
Sbjct: 574 LCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPD 633

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA-YRLQ 511
             TYTI+++G CK G +  A      ML KGL PD  AYT  + G +  G    A Y  Q
Sbjct: 634 TYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQ 693

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
           E +  +G   D I YN +++G  K G + E   L+R M  +   P   +Y  ++H  ++ 
Sbjct: 694 EIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKK 753

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK--GIRPNVI 629
           G L R   L+ +M+++G+ P  VTY +LI      G +E+A  +  +M ++  G++P   
Sbjct: 754 GQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHT 813

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
            Y ALIN  CR+  ID A+ L  DM+  G++P++   + ++   C  G  +EA+ ++  +
Sbjct: 814 HYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSI 873

Query: 690 LDREIEPDYCTHSAL---LLKQLDKDYKVHAVEYLESLTLGAE 729
           +   + P   T + L   L K+   D   H  + +ES  L  +
Sbjct: 874 MRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVD 916



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 159/548 (29%), Positives = 261/548 (47%), Gaps = 21/548 (3%)

Query: 200 LRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEM 259
           ++N  LP+    N I+      G    A  +   M + GI+  + TYN M+D  CK    
Sbjct: 256 MKNCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRS 315

Query: 260 QEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI 319
             A  LL  M+    +P+  +YN LI GF   G++  A  +   ML+  LK S  +Y  +
Sbjct: 316 ARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTAL 375

Query: 320 ICGYSEKGLLVEALNLEEE--------------------MVTRGVAPTLATYNILIYGLC 359
           I GY   G   EA  +  E                    M+  G+ P + TY+ LI G+C
Sbjct: 376 IDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALINGMC 435

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
           K G + + +     M +  V+P+ + Y TL++ +C++G+  EA   F ++    LV   V
Sbjct: 436 KMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSV 495

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
            +N L+    R G +  A+Q K+ M    I  DV ++  +++  C+ GN+  A   ++ M
Sbjct: 496 IHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNM 555

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
           +R G  PD   Y + + G  + G   +A      +L K    D  T N L+ G+CK G+L
Sbjct: 556 VRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTL 615

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           +EA +L  KMV    +PD  TYT ++    + G +     L   ML KGL P  + YT L
Sbjct: 616 DEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCL 675

Query: 600 IHAHAARGRLELAFMYFSEMQVK-GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           ++     G+++ A   F E+  K G+  + I YN+++NG  +  +I++   L  +M E  
Sbjct: 676 LNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENE 735

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAV 718
           + P+  +Y IL++     G     L LY++M+   I+PD  T+  L+    +      AV
Sbjct: 736 VYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAV 795

Query: 719 EYLESLTL 726
           ++LE + L
Sbjct: 796 KFLEKMVL 803



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 127/488 (26%), Positives = 219/488 (44%), Gaps = 57/488 (11%)

Query: 274 CSP-NGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA 332
           C P N  + ++L+  + + G++  A   I  M + G K S  S N I+            
Sbjct: 155 CDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYV 214

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
               +E + R     + T NI++  LC  G++S A     + ++   +P+ ++YNT+L  
Sbjct: 215 WLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKA-ESMLQKMKNCRLPNAVTYNTILNW 273

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
           Y + G    A  + D++    +   + TYN +ID LC+      A  L + M    + PD
Sbjct: 274 YVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPD 333

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
             +Y  +++G    G +++A   FN+MLR+ L+P    YT  I G  + G T EA R+  
Sbjct: 334 ECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLY 393

Query: 513 EM--------------------LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
           EM                    LA G  PD+ITY+ L++G+CK+G + E  E+L +M   
Sbjct: 394 EMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKS 453

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL----------------------- 589
           G +P+++ YT+++    + G  +     F ++ R GL                       
Sbjct: 454 GVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEA 513

Query: 590 ------------SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
                       S  + ++  +I ++  RG +  AF  +  M   G  P++ TY +L+ G
Sbjct: 514 EQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRG 573

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           LC+   + QA    + + E+    ++ T   L+   C  G   EAL L ++M+ R I PD
Sbjct: 574 LCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPD 633

Query: 698 YCTHSALL 705
             T++ LL
Sbjct: 634 TYTYTILL 641



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 160/366 (43%), Gaps = 16/366 (4%)

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
           ++R     L + ++L+    K G+V DA    F M        + S N +L         
Sbjct: 152 ISRCDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKS 211

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
              +L   E   R     V T N +++ LC  G L  A+ + + M N   LP+ +TY  +
Sbjct: 212 EYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCR-LPNAVTYNTI 270

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           +N   K G    A    ++M + G++ D + Y   I    KL  ++ AY L + M     
Sbjct: 271 LNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNL 330

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
            PD  +YN L+HG    G +  A  +  +M+     P   TYT++I      G     R 
Sbjct: 331 TPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARR 390

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
           +   M   G+ P  V+    I                  M   GI P+VITY+ALING+C
Sbjct: 391 VLYEMQITGVRPREVSKAKQI---------------LKCMLADGIDPDVITYSALINGMC 435

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
           ++  I +   +   M++ G+LPN   YT L+   C AG+ +EAL+ + ++    +  +  
Sbjct: 436 KMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSV 495

Query: 700 THSALL 705
            H+ALL
Sbjct: 496 IHNALL 501


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 149/479 (31%), Positives = 252/479 (52%), Gaps = 1/479 (0%)

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           + E G+ P+ VTY+ ++D  CK G +++A E   EM+ +G   +  + N ++ G+ +   
Sbjct: 171 ISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQS 230

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
            + A  +  D L+ GL  +  ++N ++    ++G + EA NL +E++ +G++P + +YN 
Sbjct: 231 WQNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNN 289

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           +I G C+   ++ A   + EML     P+ +++  L+ GY + G+I  AF +F  ++  N
Sbjct: 290 IILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDAN 349

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           ++PT  T   +I GLC+ G     + L    ++QG +P  + Y  +++G  K GN+++A 
Sbjct: 350 ILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLAS 409

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
             + EM   G+ P    YT+ I G  K  +   A +L  +M  KG   D+  Y  L+ G 
Sbjct: 410 NVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGF 469

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
           CK   ++ A+ELL ++ G G  P+   Y S+I     M ++    DL+  M+ +G+   L
Sbjct: 470 CKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDL 529

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
            TYT LI      GRL  A    +EM  KGI P+   +  LINGLC   + + A  +  D
Sbjct: 530 KTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILED 589

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
           M  + ++P+   Y  LI  +   GN QEA RL+ EMLDR + PD  T+  L+  +   D
Sbjct: 590 MNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFKGD 648



 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 155/489 (31%), Positives = 256/489 (52%), Gaps = 1/489 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y  +  +   L++ N++  +GL+P+    + +I     NG   KA E Y  M   GI+ S
Sbjct: 155 YCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSS 214

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           + + N++L+ + K    Q A  +  +    G + N  T+N L++   + G++ +A  L  
Sbjct: 215 VYSLNSILEGYLKCQSWQNAFTMFNDALESGLA-NVFTFNTLLSWLCKEGKMNEACNLWD 273

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +++  G+  +  SYN II G+  K  +  A  + +EM+  G  P   T+ IL+ G  K G
Sbjct: 274 EVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKG 333

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            + +A   F  M   N++P   +   ++ G C++G   E   LF++  S+  VPT + YN
Sbjct: 334 DIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYN 393

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           T+IDG  + G++ +A  +   M   GI P  +TYT +++G CK  N+ +A +  N+M RK
Sbjct: 394 TIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRK 453

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           GL+ D  AY T I G  K  D   A+ L  E+   G  P+   YN ++ G   + ++EEA
Sbjct: 454 GLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEA 513

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            +L +KMV +G   D  TYTS+I   L+ G L    D+   ML KG+ P    +TVLI+ 
Sbjct: 514 IDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLING 573

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
              +G+ E A     +M  K + P+V+ YN LI G  +   + +A+ L  +M + G++P+
Sbjct: 574 LCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPD 633

Query: 663 KYTYTILIN 671
             TY IL+N
Sbjct: 634 NITYDILVN 642



 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 154/534 (28%), Positives = 270/534 (50%), Gaps = 1/534 (0%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           SI+ +++LL    +K+M  +   + NKML  G+  D    + +++     G  ++A + +
Sbjct: 4   SIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQHF 63

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
                 G++     Y+  +   C +     AL LL EM+  G  P   T+  +IT   + 
Sbjct: 64  LQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKE 123

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G + +A  L  DM+  G  ++      ++ GY  +G L  AL L  E+   G+ P   TY
Sbjct: 124 GNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTY 183

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           ++LI G CK G +  A   + EM  K +   + S N++L GY +  +   AF +F++   
Sbjct: 184 SVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALE 243

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
             L   V T+NTL+  LC+ G +  A  L + +I +GI P+V++Y  ++ G C+  N++ 
Sbjct: 244 SGLA-NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINA 302

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A + + EML  G  P+   +T  + G  K GD   A+ +   M      P   T  +++ 
Sbjct: 303 ACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIK 362

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           GLCK G   E  +L  K V  GF+P  + Y +II   ++ G++    +++  M   G++P
Sbjct: 363 GLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITP 422

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
           + VTYT LI        ++LA    ++M+ KG++ ++  Y  LI+G C+ R +  A+ L 
Sbjct: 423 STVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELL 482

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            ++   G+ PN++ Y  +I    N  N +EA+ LYK+M++  I  D  T+++L+
Sbjct: 483 NELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLI 536



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 144/476 (30%), Positives = 238/476 (50%), Gaps = 21/476 (4%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           A  F+  ++T+ G++   +   +ILE     G L+   W        N   + +  +  G
Sbjct: 199 AFEFYSEMKTK-GIRSSVYSLNSILE-----GYLKCQSWQ-------NAFTMFNDALESG 245

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRII--KVLRDNGFS 224
           L++  +   L  L  +  +  M E C L +++++  G+ P+V + N II     +DN  +
Sbjct: 246 LANVFTFNTL--LSWLCKEGKMNEACNL-WDEVIAKGISPNVVSYNNIILGHCRKDNINA 302

Query: 225 VKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVL 284
             A +VY+ M + G  P+ VT+  ++D + K+G+++ A  +   M+     P   T  ++
Sbjct: 303 --ACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGII 360

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           I G  + G   + R L    +  G   +   YN II G+ ++G +  A N+  EM   G+
Sbjct: 361 IKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGI 420

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
            P+  TY  LI G CK   +  A     +M RK +  DI +Y TL+ G+C+  ++  A  
Sbjct: 421 TPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHE 480

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
           L +ELR   L P    YN++I G     ++E A  L + M+N+GI  D+ TYT +++G  
Sbjct: 481 LLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLL 540

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
           K G L  A +   EML KG+ PD  A+T  I G    G    A ++ E+M  K   P ++
Sbjct: 541 KSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVL 600

Query: 525 TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
            YN L+ G  K G+L+EA  L  +M+  G +PD+ITY  +++   + GD    RDL
Sbjct: 601 IYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFK-GDGNFSRDL 655



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 135/296 (45%), Gaps = 34/296 (11%)

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
           P +    I++    +      ARE  N+ML  G+  D F     +   LK G+  EA + 
Sbjct: 3   PSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQH 62

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
             +  A+G   D   Y++ VH LC   +   A  LLR+M   G+IP   T+TS+I A ++
Sbjct: 63  FLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVK 122

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
            G++     L ++M+  G S  L   T L+  +  +G L  A +  +E+   G+ PN +T
Sbjct: 123 EGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVT 182

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGI------------------------------- 659
           Y+ LI+G C+   I++A+  + +M+ +GI                               
Sbjct: 183 YSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDAL 242

Query: 660 ---LPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
              L N +T+  L++  C  G   EA  L+ E++ + I P+  +++ ++L    KD
Sbjct: 243 ESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKD 298


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 141/472 (29%), Positives = 260/472 (55%), Gaps = 4/472 (0%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALE-LLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
           G+K   +   T L   C      EA++ LL  M    C P+ ++YN +I     +   ++
Sbjct: 154 GLKTGTIQATTFLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQE 213

Query: 297 ARGLIRDMLKLGLKVSAH--SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           A  +++ M K G + S    S+N +I G+ ++G + +A NL  EMV +GV P + TYN +
Sbjct: 214 ALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSI 273

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           +  LCK   +  A     +M+ K V PD ++YN +++GY  SG+  E+  +F ++ S+ L
Sbjct: 274 VDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGL 333

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
           +P  VT+++ +  LC++G  + A+++ + M  +G +PD+++Y+I+++G    G  +    
Sbjct: 334 IPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNN 393

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
            F+ M  KG+  +       I+   K G   EA  +  EM  +G  P+++TY+ L+   C
Sbjct: 394 LFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFC 453

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS-PTL 593
           ++G L +A E   +M+  G  P+   Y S+IH     GDL + ++  + M+ KGL  P +
Sbjct: 454 RMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNI 513

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
           V ++ +IH+    GR+  A   F+ +   G RP ++T+N+LI+G C + ++++A+G+   
Sbjct: 514 VFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDA 573

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           M   GI P+  T   L++  C +G   + L L++EML ++++P   T++ +L
Sbjct: 574 MVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVL 625



 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 150/521 (28%), Positives = 270/521 (51%), Gaps = 3/521 (0%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE-V 230
           +I+    L  +   K   E   ++ ++M     +PD  + N +IK L  +  S +A + V
Sbjct: 159 TIQATTFLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMV 218

Query: 231 YRMMGEFG-IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
            RM  E G   P +V++NT++  F K+GE+ +A  L  EM  +G  P+  TYN ++    
Sbjct: 219 QRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALC 278

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           +   +++A  ++R M+  G++    +YN II GYS  G   E+  +  +M ++G+ P   
Sbjct: 279 KARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTV 338

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           T++  +  LCK GR  DA   F  M  K  +PDI+SY+ LL+GY   G   +   LF  +
Sbjct: 339 TFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSM 398

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
             + +V      N LI    + G ++ A  +   M  QG+ P+V+TY+ +++  C+MG L
Sbjct: 399 ADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRL 458

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP-PDLITYNV 528
           + A E F++M+  G++P+   Y + I G    GD  +A     EM++KG   P+++ ++ 
Sbjct: 459 ADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSS 518

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           ++H LC  G + +A ++   ++  G  P  +T+ S+I     +G + +   + + M+  G
Sbjct: 519 IIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVG 578

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
           + P +VT   L+  +   G+++   + F EM  K ++P  +TYN +++GL R  R   A 
Sbjct: 579 IEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAK 638

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
            +F +M + G   +  TY IL+   C      EA+ L+ ++
Sbjct: 639 KMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKL 679



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 162/561 (28%), Positives = 271/561 (48%), Gaps = 43/561 (7%)

Query: 187 SMVEQCLLVFNKMLRNG--LLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           S  ++ L +  +M + G    PDV + N +I      G   KA  ++  M + G+ P + 
Sbjct: 209 SRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVG 268

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TYN+++D+ CK   M +A  +L +M  +G  P+GVTYN +I G+S +G  +++  + R M
Sbjct: 269 TYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKM 328

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
              GL     +++  +    + G   +A  + + M T+G  P + +Y+IL++G    GR 
Sbjct: 329 TSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRF 388

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
           +D  + F  M  K ++ +    N L+  + + G + EA L+F E++ + + P VVTY+TL
Sbjct: 389 ADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTL 448

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           I   CR G L  A +    MI+ GI P+   Y  +++G C  G+L  A+EF +EM+ KGL
Sbjct: 449 ISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGL 508

Query: 485 QPDRFAYTTQIAGELKL-GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
                 + + I   L + G   +A  +   ++  G  P ++T+N L+ G C +G +E+A 
Sbjct: 509 HRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAF 568

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
            +L  MV  G  PD +T  +++    + G +  G  LF  ML K + PT VTY +++   
Sbjct: 569 GVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGL 628

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR----------------------- 640
              GR   A   F EM   G   ++ TY  L+ GLCR                       
Sbjct: 629 LRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDI 688

Query: 641 ------------LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
                       +RR ++A  LF  +   G++PN  TY ++I      G+ +EA  ++  
Sbjct: 689 TILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSS 748

Query: 689 MLDREIEPDYCTHSALLLKQL 709
           M     E   C  S+ LL  +
Sbjct: 749 M-----EKSGCAPSSRLLNDI 764



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 132/462 (28%), Positives = 224/462 (48%), Gaps = 36/462 (7%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F KM   GL+PD    +  +  L  +G S  A E+++ M   G  P IV+Y+ +L  + 
Sbjct: 324 MFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYA 383

Query: 255 KEGE-----------------------------------MQEALELLWEMQGRGCSPNGV 279
            EG                                    M EA+ +  EMQG+G  PN V
Sbjct: 384 TEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVV 443

Query: 280 TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
           TY+ LI+ F R G L  A      M+ +G++ +   Y+ +I G+   G LV+A     EM
Sbjct: 444 TYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEM 503

Query: 340 VTRGVA-PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
           +++G+  P +  ++ +I+ LC  GRV DA+  F  ++     P I+++N+L+ GYC  G 
Sbjct: 504 MSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGK 563

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           + +AF + D + S  + P VVT NTL+ G C+ G ++    L   M+++ + P  +TY I
Sbjct: 564 MEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNI 623

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           +++G  + G  S A++ F+EM+  G   D   Y   + G  +   T EA  L  ++ A  
Sbjct: 624 VLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMD 683

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
              D+   N +++ L K+   EEAN+L   +   G +P+  TY  +I   L+ G +    
Sbjct: 684 CKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEAD 743

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
            +F++M + G +P+      +I     +G +  A  Y S++ 
Sbjct: 744 TMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVD 785



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 212/415 (51%), Gaps = 1/415 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F+ M   G++ +    N +I      G   +A  V+  M   G++P++VTY+T++ +FC
Sbjct: 394 LFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFC 453

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL-KVSA 313
           + G + +A+E   +M   G  PN   Y+ LI GF  +G+L +A+  I +M+  GL + + 
Sbjct: 454 RMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNI 513

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
             ++ II     +G +++A ++   ++  G  PT+ T+N LI G C  G++  A      
Sbjct: 514 VFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDA 573

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M+   + PD+++ NTL+ GYC+SG I +  +LF E+  + + PT VTYN ++DGL R G 
Sbjct: 574 MVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGR 633

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
              A+++   MI+ G   D+ TY I++ G C+      A   F+++     + D     T
Sbjct: 634 TSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNT 693

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            I    K+    EA  L   +   G  P++ TY V++  L K GS+EEA+ +   M   G
Sbjct: 694 MINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSG 753

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
             P       II   L+ GD+ +     + +    +S    T ++L+   +++G+
Sbjct: 754 CAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGK 808



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 179/379 (47%), Gaps = 39/379 (10%)

Query: 165 GGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS 224
           G +S+C  I IL   +  + K+ M+++ +LVF +M   G+ P+V   + +I      G  
Sbjct: 402 GIVSNCHCINIL---ISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRL 458

Query: 225 VKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG----------- 273
             A E +  M   GI+P+   Y++++  FC  G++ +A E + EM  +G           
Sbjct: 459 ADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSS 518

Query: 274 -----C--------------------SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
                C                     P  VT+N LI G+   G++E+A G++  M+ +G
Sbjct: 519 IIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVG 578

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           ++    + N ++ GY + G + + L L  EM+ + V PT  TYNI++ GL + GR S A+
Sbjct: 579 IEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAK 638

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F EM+      DI +Y  LL G CR+    EA  LF +L + +    +   NT+I+ L
Sbjct: 639 KMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINAL 698

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
            +    E A  L   +   G++P+V TY +M+    K G++  A   F+ M + G  P  
Sbjct: 699 YKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSS 758

Query: 489 FAYTTQIAGELKLGDTSEA 507
                 I   L+ GD  +A
Sbjct: 759 RLLNDIIRMLLQKGDIVKA 777



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 173/390 (44%), Gaps = 50/390 (12%)

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCR-----SGNIGEAFLL--FDELRSRNLVP-- 416
           DA H F E+LR+       S N  L    R     S + G A +L  F+ +      P  
Sbjct: 60  DAHHLFDELLRQGTPVHNRSLNDFLAALARAPDSVSCSNGPALVLALFNRICREEAGPRV 119

Query: 417 ---TVVTYNTLIDGLCR-----YGDLEVAQQLKENMINQGI------------------- 449
              TV TY  L+D  CR      G   VA+ L+  +    I                   
Sbjct: 120 APLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAV 179

Query: 450 ------------LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG--LQPDRFAYTTQI 495
                       +PD I+Y  ++   C       A +    M ++G    PD  ++ T I
Sbjct: 180 DVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVI 239

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
            G  K G+ S+A  L  EM+ KG  PD+ TYN +V  LCK  ++++A  +LR+MV  G  
Sbjct: 240 HGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVE 299

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           PD +TY +IIH     G  +    +F  M  KGL P  VT++  + +    GR + A   
Sbjct: 300 PDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEI 359

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
           F  M  KG  P++++Y+ L++G     R      LF  M ++GI+ N +   ILI+ +  
Sbjct: 360 FQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAK 419

Query: 676 AGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            G   EA+ ++ EM  + + P+  T+S L+
Sbjct: 420 RGMMDEAMLVFTEMQGQGVRPNVVTYSTLI 449


>gi|334182978|ref|NP_001185123.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|332193283|gb|AEE31404.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 811

 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 157/560 (28%), Positives = 279/560 (49%), Gaps = 42/560 (7%)

Query: 186 KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVT 245
           K  V + L     ++  G    + +CN+++K L  +   V +R +  ++ + G  P++VT
Sbjct: 230 KGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASR-LLSLVLDCGPAPNVVT 288

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           + T+++ FCK GEM  A +L   M+ RG  P+ + Y+ LI G+ + G L     L    L
Sbjct: 289 FCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQAL 348

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
             G+K+    ++  I  Y + G L  A  + + M+ +G++P + TY ILI GLC+ GR+ 
Sbjct: 349 HKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIY 408

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
           +A   + ++L++ + P I++Y++L+ G+C+ GN+   F L++++      P VV Y  L+
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           DGL + G +  A +    M+ Q I  +V+ +  +++G C++     A + F  M   G++
Sbjct: 469 DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIK 528

Query: 486 PDRFAYTT------------------------------QIAGELKLGDT----------- 504
           PD   +TT                              +I+ ++ + +            
Sbjct: 529 PDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRI 588

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
            +A +    ++     PD++TYN ++ G C L  L+EA  +   +    F P+ +T T +
Sbjct: 589 EDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTIL 648

Query: 565 IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
           IH   +  D+     +F+ M  KG  P  VTY  L+   +    +E +F  F EMQ KGI
Sbjct: 649 IHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGI 708

Query: 625 RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
            P++++Y+ +I+GLC+  R+D+A  +F    +  +LP+   Y ILI   C  G   EA  
Sbjct: 709 SPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAAL 768

Query: 685 LYKEMLDREIEPDYCTHSAL 704
           LY+ ML   ++PD     AL
Sbjct: 769 LYEHMLRNGVKPDDLLQRAL 788



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 194/368 (52%), Gaps = 8/368 (2%)

Query: 337 EEMVTRGVAPT-LATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
           +++   G+ P+ ++ +  ++  L   G V+ A      ++ +     I+S N +L G   
Sbjct: 205 DKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-S 263

Query: 396 SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
              I  A  L   +      P VVT+ TLI+G C+ G+++ A  L + M  +GI PD+I 
Sbjct: 264 VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIA 323

Query: 456 YTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML 515
           Y+ +++G  K G L M  + F++ L KG++ D   +++ I   +K GD + A  + + ML
Sbjct: 324 YSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRML 383

Query: 516 AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLR 575
            +G  P+++TY +L+ GLC+ G + EA  +  +++  G  P  +TY+S+I    + G+LR
Sbjct: 384 CQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLR 443

Query: 576 RGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALI 635
            G  L+ +M++ G  P +V Y VL+   + +G +  A  +  +M  + IR NV+ +N+LI
Sbjct: 444 SGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503

Query: 636 NGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT------ILINENCNAGNWQEALRLYKEM 689
           +G CRL R D+A  +F  M   GI P+  T+T      I+ +  C        L+L+  M
Sbjct: 504 DGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLM 563

Query: 690 LDREIEPD 697
              +I  D
Sbjct: 564 QRNKISAD 571



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 189/375 (50%), Gaps = 20/375 (5%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G++     + ++++   + G LRS + + E ++   M    DV+I G L   +S + L L
Sbjct: 421 GMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI--KMGYPPDVVIYGVLVDGLSKQGLML 478

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
             + ++ K + +   L  N ++ N L+      NR  + L+          V+R+MG +G
Sbjct: 479 HAMRFSVKMLGQSIRL--NVVVFNSLIDGWCRLNRFDEALK----------VFRLMGIYG 526

Query: 239 IKPSIVTYNTML------DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
           IKP + T+ T++      D+FCK  +    L+L   MQ    S +    NV+I    +  
Sbjct: 527 IKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCH 586

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
            +E A     ++++  ++    +YN +ICGY     L EA  + E +      P   T  
Sbjct: 587 RIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLT 646

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
           ILI+ LCK   +  A   F  M  K   P+ ++Y  L+  + +S +I  +F LF+E++ +
Sbjct: 647 ILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK 706

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
            + P++V+Y+ +IDGLC+ G ++ A  +    I+  +LPDV+ Y I++ G CK+G L  A
Sbjct: 707 GISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEA 766

Query: 473 REFFNEMLRKGLQPD 487
              +  MLR G++PD
Sbjct: 767 ALLYEHMLRNGVKPD 781



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/358 (24%), Positives = 164/358 (45%), Gaps = 37/358 (10%)

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
           N G+ F +   +R R+L   V  +  L++  CRYG ++ A ++       G++    +  
Sbjct: 128 NRGKDFNVLGSIRDRSLDADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVY 185

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF-AYTTQIAGELKLGDTSEAYRLQEEMLA 516
            M+N       + +  + F+++ R G++P    A+   +      G+ ++A      ++ 
Sbjct: 186 RMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVME 245

Query: 517 KGF----------------------------------PPDLITYNVLVHGLCKLGSLEEA 542
           +GF                                   P+++T+  L++G CK G ++ A
Sbjct: 246 RGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRA 305

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            +L + M   G  PD I Y+++I    + G L  G  LF+  L KG+   +V ++  I  
Sbjct: 306 FDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDV 365

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
           +   G L  A + +  M  +GI PNV+TY  LI GLC+  RI +A+G++  + + G+ P+
Sbjct: 366 YVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPS 425

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
             TY+ LI+  C  GN +    LY++M+     PD   +  L+     +   +HA+ +
Sbjct: 426 IVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRF 483


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 145/484 (29%), Positives = 258/484 (53%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PS V +  +L S  K       L L  +M   G  P+  T N+LI  F     L  A  +
Sbjct: 148 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 207

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  +LKLG +    ++N +I G   +G + EAL+L ++ +  G  P + TY  L+ GLCK
Sbjct: 208 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 267

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G  S A      M++KN  P++I+YNT++   C+   + EAF LF E+ ++ + P + T
Sbjct: 268 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFT 327

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YN+LI  LC   + +    L   M+N  I+P+V+ ++ +V+  CK G +++A +  + M+
Sbjct: 328 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI 387

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           ++G++PD   YT  + G     +  EA ++ + M+ KG  P++ +YN+L++G C++  ++
Sbjct: 388 KRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMD 447

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           +A  LL +M   G I D +TY ++IH    +G L+    LF+ M+  G  P LVTY +L+
Sbjct: 448 KAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILL 507

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                   L  A +    ++   +  +++ YN  I+G+CR   ++ A  LF ++  +G+ 
Sbjct: 508 DYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQ 567

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
           P+  TY I+I+  C  G   EA +L+++M +     D C ++ ++   L  +    A + 
Sbjct: 568 PDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQL 627

Query: 721 LESL 724
           L+ +
Sbjct: 628 LQEM 631



 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 159/541 (29%), Positives = 266/541 (49%), Gaps = 1/541 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           ++  L  FN+ML     P   +  +++  +           +   M  FGI P + T N 
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++SFC    +  A  +L ++   GC P+  T+N LI G    G++ +A  L    +  G
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 250

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            +    +Y  ++ G  + G    A+ L   MV +   P +  YN +I  LCK  +V++A 
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 310

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
           + F EM+ K + PDI +YN+L++  C          L +E+ +  ++P VV ++T++D L
Sbjct: 311 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 370

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G + +A  + + MI +G+ PDV+TYT +++G C    +  A + F+ M+ KG  P+ 
Sbjct: 371 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 430

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
            +Y   I G  ++    +A  L E+M  +G   D +TYN L+HGLC +G L+ A  L  +
Sbjct: 431 RSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 490

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           MV  G IPD +TY  ++    +   L     L   +    L   ++ Y + I      G 
Sbjct: 491 MVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGE 550

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           LE A   FS +  KG++P+V TYN +I+GLC+   +D+A  LF  M+E G   +   Y  
Sbjct: 551 LEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNT 610

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLGA 728
           +I     +     A +L +EML      D  T + L+++ L  D    + E L    +G 
Sbjct: 611 IIRGFLRSNETFGATQLLQEMLAEGFSADVST-TTLIVEMLSDDGLDQSFERLRLRGVGE 669

Query: 729 E 729
           E
Sbjct: 670 E 670



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 142/300 (47%), Gaps = 15/300 (5%)

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           +NTL D L  +            M++    P  + +T ++    KM + S       +M 
Sbjct: 128 FNTLDDALSSF----------NRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMD 177

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
             G+ PD +     I     L     A+ +  ++L  G  PD  T+N L+ GLC  G + 
Sbjct: 178 SFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIG 237

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA  L  K +G+GF PD +TY ++++   ++G+      L  +M++K   P ++ Y  +I
Sbjct: 238 EALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTII 297

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
            +     ++  AF  FSEM  KGI P++ TYN+LI+ LC L        L  +M    I+
Sbjct: 298 DSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIM 357

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL-----LLKQLDKDYKV 715
           PN   ++ +++  C  G    A  +   M+ R +EPD  T++AL     L  ++D+  KV
Sbjct: 358 PNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKV 417



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 135/302 (44%), Gaps = 28/302 (9%)

Query: 126 VFCTILEILIESGLLRSAYWVVETVV-----------CVNMHG------------ILDVL 162
           VF T+++ L + G++  A+ VV+ ++              M G            + D +
Sbjct: 362 VFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTM 421

Query: 163 IGGGLSSCV-SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDN 221
           +  G   CV +++  ++L+  Y +   +++ + +  +M   GL+ D    N +I  L   
Sbjct: 422 VHKG---CVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHV 478

Query: 222 GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY 281
           G    A  ++  M   G  P +VTY  +LD  CK   + EA+ LL  ++G     + + Y
Sbjct: 479 GRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVY 538

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
           N+ I G  R GELE AR L  ++   GL+    +YN +I G  ++GLL EA  L  +M  
Sbjct: 539 NIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDE 598

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
            G +     YN +I G  +      A     EML +    D +S  TL+        + +
Sbjct: 599 NGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSAD-VSTTTLIVEMLSDDGLDQ 657

Query: 402 AF 403
           +F
Sbjct: 658 SF 659


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 144/426 (33%), Positives = 242/426 (56%), Gaps = 1/426 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V + +++ ++M+ NG  PD+   N I+  +  +G +  A ++ R M E  +K  + TY+T
Sbjct: 174 VSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYST 233

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++DS C++G +  A+ L  EM+ +G   + VTYN L+ G  + G+      L++DM+   
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           +  +  ++N ++  + ++G L EA  L +EM+TRG++P + TYN L+ G C   R+S+A 
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
           +    M+R    PDI+++ +L+ GYC    + +   +F  +  R LV   VTY+ L+ G 
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G +++A++L + M++ G+LPDV+TY I+++G C  G L  A E F ++ +  +    
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 473

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             YTT I G  K G   +A+ L   +  KG  P+++TY V++ GLCK GSL EAN LLRK
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 533

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M  DG  P+  TY ++I A L  GDL     L   M   G S    +  ++I    + G 
Sbjct: 534 MEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLS-GE 592

Query: 609 LELAFM 614
           L+ +F+
Sbjct: 593 LDKSFL 598



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 153/529 (28%), Positives = 274/529 (51%), Gaps = 6/529 (1%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +  + +F +M+R+  LP + + +R    + R   F++   +  + +   GI  +I T N 
Sbjct: 70  DDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNL-VLDFCKQLELNGIAHNIYTLNI 128

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           M++ FC+  +   A  +L ++   G  P+  T+N LI G    G++ +A  L+  M++ G
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENG 188

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            +    +YN I+ G    G    A ++  +M  R V   + TY+ +I  LC+ G +  A 
Sbjct: 189 CQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F EM  K +   +++YN+L+ G C++G   +  LL  ++ SR +VP V+T+N L+D  
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
            + G L+ A +L + MI +GI P++ITY  +++G C    LS A    + M+R    PD 
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 368

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             +T+ I G   +    +  ++   +  +G   + +TY++LV G C+ G ++ A EL ++
Sbjct: 369 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 428

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           MV  G +PD +TY  ++    + G L +  ++F ++ +  +   +V YT +I      G+
Sbjct: 429 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK 488

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           +E A+  F  +  KG++PNV+TY  +I+GLC+   + +A  L   MEE+G  PN  TY  
Sbjct: 489 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNT 548

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCT----HSALLLKQLDKDY 713
           LI  +   G+   + +L +EM       D  +       LL  +LDK +
Sbjct: 549 LIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELDKSF 597



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 198/394 (50%)

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
           +A+ L +EM+     P L  ++     + +  + +       ++    +  +I + N ++
Sbjct: 71  DAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
             +CR      A+ +  ++      P   T+NTLI+GLC  G +  A  L + M+  G  
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQ 190

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
           PD++TY  +VNG C+ G+ S+A +   +M  + ++ D F Y+T I    + G    A  L
Sbjct: 191 PDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
            +EM  KG    ++TYN LV GLCK G   +   LL+ MV    +P+ IT+  ++   ++
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
            G L+   +L+  M+ +G+SP ++TY  L+  +  + RL  A      M      P+++T
Sbjct: 311 EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVT 370

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           + +LI G C ++R+D    +F ++ + G++ N  TY+IL+   C +G  + A  L++EM+
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430

Query: 691 DREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
              + PD  T+  LL    D      A+E  E L
Sbjct: 431 SHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 163/564 (28%), Positives = 276/564 (48%), Gaps = 38/564 (6%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL---RDNGFSVKAR 228
           S ++LD  +  Y +         +FNKM R    P++  CN ++  L     +   + AR
Sbjct: 139 SKELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLAR 198

Query: 229 EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
           +V +   + G+ P+  ++N ++  +C E ++++AL+ + +M   GC P+ V+YN ++   
Sbjct: 199 QVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDAL 258

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
            +   L++AR L+ DM   GL  + H+YN ++CGY   GLL EA  + E M    + PT+
Sbjct: 259 LKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTV 318

Query: 349 ATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG---------------- 392
            TYN+L+ G C  G++ +A     EM + NV+PD+++YNTL+ G                
Sbjct: 319 WTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEE 378

Query: 393 -------------------YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
                               C+ GN+ EA    D++    L P  VTYNTLI   C+ G 
Sbjct: 379 MDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGK 438

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           +  A ++ + M ++G+  D  T   +++  C    L  A        ++G   D  +Y  
Sbjct: 439 MGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGI 498

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            I G  K      A  L +EM  +   P  ITYN ++ GLC+   +++A + L +M+ +G
Sbjct: 499 LILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENG 558

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
            +PD  TY  IIH     G++ +     N M+     P + T  +L+      G LE A 
Sbjct: 559 LVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKAL 618

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
             F+ +  KG   +V+TYN +I+ LC+  + + AY L  +ME + + P++YTY ++I   
Sbjct: 619 KLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAAL 678

Query: 674 CNAGNWQEALRLYKEMLDREIEPD 697
            +AG  +EA     +M++  I  D
Sbjct: 679 TDAGRIKEAEEFTLKMVESGIVHD 702



 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 160/532 (30%), Positives = 258/532 (48%), Gaps = 38/532 (7%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCK---EGEMQEALELLWEMQGRGCSPNGVTYNV 283
           A +++  M     +P+++T NT+++S  +      +  A ++L +    G  PN  ++N+
Sbjct: 159 ATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNI 218

Query: 284 LITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG 343
           LI G+    +++ A   +  M + G      SYN I+    ++ LL EA +L  +M ++G
Sbjct: 219 LIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKG 278

Query: 344 VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF 403
           ++P   TYN+L+ G C+ G + +A      M R N++P + +YN L+ G+C  G I EAF
Sbjct: 279 LSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAF 338

Query: 404 LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
            + DE+   N++P VVTYNTLIDG  ++ D      L E M  +G+  + +TY I++   
Sbjct: 339 RIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWM 398

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
           CK GN++ A    ++M   GL PD   Y T I    K G   +A+R+ +EM +KG   D 
Sbjct: 399 CKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDT 458

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFI---------------------------- 555
            T N ++H LC    L+EA  LL      G+I                            
Sbjct: 459 WTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDE 518

Query: 556 -------PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
                  P  ITY S+I    +   + +  D  N ML  GL P   TY ++IH     G 
Sbjct: 519 MKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGN 578

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           +E AF + +EM     +P+V T N L+ GLCR   +++A  LF  +  +G   +  TY  
Sbjct: 579 VEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNT 638

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
           +I+  C  G ++ A  L  EM  +++ PD  T+  ++    D      A E+
Sbjct: 639 IISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEF 690



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 138/469 (29%), Positives = 248/469 (52%), Gaps = 3/469 (0%)

Query: 240 KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR---NGELEQ 296
           +PS    +T + ++ +  +   A ++  +M+     PN +T N L+    R   +  +  
Sbjct: 137 EPSKELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILL 196

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           AR +++D +KLG+  + +S+N +I GY  +  + +AL+   +M   G  P   +YN ++ 
Sbjct: 197 ARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILD 256

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
            L K   + +AR    +M  K + P+  +YN L+ GYCR G + EA  + + +   NL+P
Sbjct: 257 ALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLP 316

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
           TV TYN L++G C  G ++ A ++++ M    +LPDV+TY  +++G  +  + S      
Sbjct: 317 TVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLI 376

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
            EM +KG++ +   Y   +    K G+ +EA    ++M   G  PD +TYN L+   CK 
Sbjct: 377 EEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKA 436

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G + +A  ++ +M   G   D  T  +I+H       L    +L  +  ++G     V+Y
Sbjct: 437 GKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSY 496

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
            +LI  +    + + A   + EM+ + I P+ ITYN++I GLC+ R++DQA     +M E
Sbjct: 497 GILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLE 556

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            G++P++ TY I+I+  C  GN ++A + + EM++   +PD  T + LL
Sbjct: 557 NGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILL 605



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 126/442 (28%), Positives = 207/442 (46%), Gaps = 68/442 (15%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSV--KAREVYRMMGEF---GIKPSI 243
           +++   + ++M +  +LPDV   N +I     +G S    + EVY ++ E    G+K + 
Sbjct: 334 IDEAFRIRDEMEKMNVLPDVVTYNTLI-----DGCSQWRDSSEVYSLIEEMDKKGVKCNA 388

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           VTYN +L   CK+G M EA   L +M+  G SP+ VTYN LI  + + G++ +A  ++ +
Sbjct: 389 VTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDE 448

Query: 304 MLKLGLKVSAHSYNPII----------------CGYSEKGLLVE---------------- 331
           M   GLK+   + N I+                C  S++G +++                
Sbjct: 449 MTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEK 508

Query: 332 ---ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNT 388
              ALNL +EM  R + P+  TYN +I GLC+  +V  A  +  EML   ++PD  +YN 
Sbjct: 509 GDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNI 568

Query: 389 LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
           +++G+C  GN+ +AF   +E+      P V T N L+ GLCR G LE A +L   ++++G
Sbjct: 569 IIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKG 628

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
              DV+TY  +++  CK G    A +   EM  K L PD++ Y   IA     G   EA 
Sbjct: 629 KDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAE 688

Query: 509 RLQEEMLAKGFPPDL-----------------------ITYNVLVHGLCKLGSLEEANEL 545
               +M+  G   D                        I Y+  ++ LC     ++A  L
Sbjct: 689 EFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHL 748

Query: 546 LRKMVGDGFIPDHITYTSIIHA 567
             ++  +G   +  TY +++  
Sbjct: 749 FVEVTKEGVALNKYTYLNLMEG 770



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 127/263 (48%), Gaps = 23/263 (8%)

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           +A  ++  M E  I PS +TYN+++   C+  ++ +A++ L EM   G  P+  TYN++I
Sbjct: 511 RALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIII 570

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            GF   G +E+A     +M++   K   ++ N ++ G   +G+L +AL L   +V++G  
Sbjct: 571 HGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKD 630

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA--- 402
             + TYN +I  LCK G+  +A     EM  K + PD  +Y  ++     +G I EA   
Sbjct: 631 IDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEF 690

Query: 403 -------FLLFDEL----RSRNLVPTVVT---------YNTLIDGLCRYGDLEVAQQLKE 442
                   ++ D+     + +N++ + V+         Y+  I+ LC     + A  L  
Sbjct: 691 TLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHLFV 750

Query: 443 NMINQGILPDVITYTIMVNGSCK 465
            +  +G+  +  TY  ++ G  K
Sbjct: 751 EVTKEGVALNKYTYLNLMEGLIK 773



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 147/349 (42%), Gaps = 43/349 (12%)

Query: 109 RFFRWVE--TQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVC-VNMHG-ILDVLIG 164
           + FR ++  T  G+K D +   TIL  L     L  AY     ++C  +  G ILD +  
Sbjct: 441 KAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAY----NLLCSASKRGYILDEVSY 496

Query: 165 GGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS 224
           G            +L+L Y K    ++ L ++++M    ++P     N +I  L  +   
Sbjct: 497 G------------ILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKV 544

Query: 225 VKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVL 284
            +A +    M E G+ P   TYN ++  FC EG +++A +   EM      P+  T N+L
Sbjct: 545 DQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNIL 604

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           + G  R G LE+A  L   ++  G  +   +YN II    ++G    A +L  EM  + +
Sbjct: 605 LRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKL 664

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD---------------------- 382
            P   TY ++I  L   GR+ +A     +M+   ++ D                      
Sbjct: 665 GPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDF 724

Query: 383 -IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
             I+Y+  +   C      +A  LF E+    +     TY  L++GL +
Sbjct: 725 KSIAYSDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEGLIK 773


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 179/655 (27%), Positives = 314/655 (47%), Gaps = 28/655 (4%)

Query: 77  RWVSD-HFQAVVSD--PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEI 133
           RW  D   + ++    P LL  + N +   P  AL FFRW+              ++L +
Sbjct: 37  RWRKDPSLKTLIPSLTPSLLCSLFN-LNPDPLTALNFFRWIRRHHNFPHSLATHHSLLLL 95

Query: 134 LIESGLLRSAYWVVETVV--CVNMHG---ILDVL-----------IGGGLSSCVSIKILD 177
           L+    LR+A  V  +++  C + H    +L++L               L+  +S+   +
Sbjct: 96  LVRHRTLRAAENVRNSMIKSCTSPHDATFLLNLLRRMNTAAAAADHQHQLAFKLSLTSYN 155

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLR---NGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
            LL+  ++ SMV++ + ++ +ML    N + P++   N ++      G    AR  +  +
Sbjct: 156 RLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVARLFFVRI 215

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
                 P + TY +++  +C+  +++ A  +   M  R    N V+Y  LI G    G+L
Sbjct: 216 LRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRR----NAVSYTNLIHGLCEAGKL 271

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
            +A      M + G   +  +Y  ++C   E G  +EAL+L  EM  RG  P + TY +L
Sbjct: 272 HEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVL 331

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           I  LCK GR+ +A     EM+ K V P ++ +N L+  YC+ G + +A  +   + S+ +
Sbjct: 332 IDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKV 391

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P V TYN LI G CR   ++ A  L   M+   + PDV+TY  +++G C++G +  A  
Sbjct: 392 CPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASR 451

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
            F  M+R G  PD++ +   +    ++G   EA+++ E +  K    +   Y  L+ G C
Sbjct: 452 LFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYC 511

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           K G +E A  L ++M+ +  +P+ IT+  +I    + G ++    L  +M +  + PTL 
Sbjct: 512 KAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLH 571

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           TY +L+         + A    + +   G +PNV+TY A I   C   R+++A  + I +
Sbjct: 572 TYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKI 631

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQL 709
           + EG+L + + Y +LIN     G    A  + + M     EP Y T+S +L+K L
Sbjct: 632 KNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYS-ILMKHL 685



 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 159/546 (29%), Positives = 271/546 (49%), Gaps = 36/546 (6%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           + + L  + +M  +G  P V+    ++  L ++G  ++A  ++  M E G +P++ TY  
Sbjct: 271 LHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTV 330

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++D  CKEG M EAL++L EM  +G +P+ V +N LI  + + G +E A G++  M    
Sbjct: 331 LIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKK 390

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           +  +  +YN +ICG+     +  A+ L  +MV   ++P + TYN LI+GLC+ G V  A 
Sbjct: 391 VCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSAS 450

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F  M+R    PD  ++N  +   CR G +GEA  + + L+ +++      Y  LIDG 
Sbjct: 451 RLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGY 510

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G +E A  L + M+ +  LP+ IT+ +M++G  K G +  A     +M +  ++P  
Sbjct: 511 CKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTL 570

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             Y   +   LK  D   A  +   +++ G+ P+++TY   +   C  G LEEA E++ K
Sbjct: 571 HTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIK 630

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL-----IHAH 603
           +  +G + D   Y  +I+A   MG L     +   M   G  P+ +TY++L     I  H
Sbjct: 631 IKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKH 690

Query: 604 AARGR------------------------LELAFMYFSEMQVKGIRPNVITYNALINGLC 639
              G                           +  + F +M   G  PN+ TY+ LINGLC
Sbjct: 691 KKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLC 750

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
           ++ R++ A+ L+  M E GI P++  +  L++  C  G + EA+ L   M++       C
Sbjct: 751 KVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMME-------C 803

Query: 700 THSALL 705
           +H A L
Sbjct: 804 SHLAHL 809



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 141/546 (25%), Positives = 240/546 (43%), Gaps = 66/546 (12%)

Query: 191 QCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTML 250
           + L +F +M   G  P+V     +I  L   G   +A ++   M E G+ PS+V +N ++
Sbjct: 308 EALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALI 367

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
            S+CK G M++A+ +L  M+ +   PN  TYN LI GF R   +++A  L+  M++  L 
Sbjct: 368 GSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLS 427

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
               +YN +I G  E G++  A  L   M+  G +P   T+N  +  LC+ GRV +A H+
Sbjct: 428 PDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEA-HQ 486

Query: 371 FFEMLR-KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
             E L+ K+V  +  +Y  L+ GYC++G I  A  LF  + +   +P  +T+N +IDGL 
Sbjct: 487 ILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLR 546

Query: 430 RYGDLEVAQQLKENM-----------------------------------INQGILPDVI 454
           + G ++ A  L E+M                                   I+ G  P+V+
Sbjct: 547 KEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVV 606

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
           TYT  +   C  G L  A E   ++  +G+  D F Y   I     +G    A+ +   M
Sbjct: 607 TYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRM 666

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANE-----------------------------L 545
              G  P  +TY++L+  L      +E +                              L
Sbjct: 667 FGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVL 726

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
             KM   G +P+  TY+ +I+   ++G L     L+++M   G+SP+ + +  L+ +   
Sbjct: 727 FEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCK 786

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
            G    A      M       ++ +Y  LI GL      ++A  +F  +   G   ++  
Sbjct: 787 LGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVA 846

Query: 666 YTILIN 671
           + +LI+
Sbjct: 847 WKVLID 852



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 139/533 (26%), Positives = 234/533 (43%), Gaps = 35/533 (6%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           S+   + L+  Y K+ M+E  + V   M    + P+V+  N +I          +A  + 
Sbjct: 359 SVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALL 418

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M E  + P +VTYNT++   C+ G +  A  L   M   G SP+  T+N  +    R 
Sbjct: 419 NKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRM 478

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G + +A  ++  + +  +K + H+Y  +I GY + G +  A +L + M+     P   T+
Sbjct: 479 GRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITF 538

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           N++I GL K G+V DA     +M + +V P + +YN L+    +  +   A  + + L S
Sbjct: 539 NVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLIS 598

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
               P VVTY   I   C  G LE A+++   + N+G+L D   Y +++N    MG L  
Sbjct: 599 SGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDS 658

Query: 472 AREFFNEMLRKGLQPDRFAYT--------------------------------TQIAGEL 499
           A      M   G +P    Y+                                T I  ++
Sbjct: 659 AFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKI 718

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
             G T+  +   E+M   G  P+L TY+ L++GLCK+G L  A  L   M   G  P  I
Sbjct: 719 DFGITTVLF---EKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEI 775

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
            + S++ +  ++G       L ++M+       L +Y +LI     +   E A   F  +
Sbjct: 776 IHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSL 835

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
              G   + + +  LI+GL +   +DQ   L   ME+ G   +  TY++L+ E
Sbjct: 836 LRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQE 888



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 125/500 (25%), Positives = 222/500 (44%), Gaps = 29/500 (5%)

Query: 170 CVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE 229
           C +++  + L+  + +   +++ + + NKM+ + L PDV   N +I  L + G    A  
Sbjct: 392 CPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASR 451

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           ++R+M   G  P   T+N  +   C+ G + EA ++L  ++ +    N   Y  LI G+ 
Sbjct: 452 LFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYC 511

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           + G++E A  L + ML      ++ ++N +I G  ++G + +A+ L E+M    V PTL 
Sbjct: 512 KAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLH 571

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           TYNIL+  + K      A      ++     P++++Y   +  YC  G + EA  +  ++
Sbjct: 572 TYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKI 631

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN-------- 461
           ++  ++     YN LI+     G L+ A  +   M   G  P  +TY+I++         
Sbjct: 632 KNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHK 691

Query: 462 --GSCKMG-------------------NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
             GS  +G                   +  +    F +M   G  P+   Y+  I G  K
Sbjct: 692 KEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCK 751

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
           +G  + A+ L   M   G  P  I +N L+   CKLG   EA  LL  M+    +    +
Sbjct: 752 VGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLES 811

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           Y  +I    E  +  +   +F ++LR G +   V + VLI   A  G ++      + M+
Sbjct: 812 YKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLME 871

Query: 621 VKGIRPNVITYNALINGLCR 640
             G R +  TY+ L+  L R
Sbjct: 872 KNGCRLHPETYSMLMQELNR 891



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 188/400 (47%), Gaps = 14/400 (3%)

Query: 329 LVEALNLEEEMVTRGVAPTLATYNI-LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYN 387
           L  A N+   M+    +P  AT+ + L+  +      +D +H+    L       + SYN
Sbjct: 102 LRAAENVRNSMIKSCTSPHDATFLLNLLRRMNTAAAAADHQHQLAFKL------SLTSYN 155

Query: 388 TLLYGYCRSGNIGEAFLLFDELRSRN---LVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
            LL    R   + E   L+ E+ + N   + P ++T NT+++  C+ G++ VA+     +
Sbjct: 156 RLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVARLFFVRI 215

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
           +     PD+ TYT +V G C+  ++  A   F  M R+    +  +YT  I G  + G  
Sbjct: 216 LRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRR----NAVSYTNLIHGLCEAGKL 271

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
            EA      M   G  P + TY VLV  LC+ G   EA  L  +M   G  P+  TYT +
Sbjct: 272 HEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVL 331

Query: 565 IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
           I    + G +     + N M+ KG++P++V +  LI ++  RG +E A      M+ K +
Sbjct: 332 IDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKV 391

Query: 625 RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
            PNV TYN LI G CR + +D+A  L   M E  + P+  TY  LI+  C  G    A R
Sbjct: 392 CPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASR 451

Query: 685 LYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           L++ M+     PD  T +A ++          A + LESL
Sbjct: 452 LFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESL 491



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 120/465 (25%), Positives = 204/465 (43%), Gaps = 31/465 (6%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETV----VCVNMHGILDVL 162
           A R FR +  + G   D++ F   +  L   G +  A+ ++E++    V  N H    ++
Sbjct: 449 ASRLFRLM-IRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALI 507

Query: 163 IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG 222
            G                  Y K   +E    +F +ML    LP+    N +I  LR  G
Sbjct: 508 DG------------------YCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEG 549

Query: 223 FSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYN 282
               A  +   M +F +KP++ TYN +++   KE +   A E+L  +   G  PN VTY 
Sbjct: 550 KVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYT 609

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
             I  +   G LE+A  ++  +   G+ + +  YN +I  Y   GLL  A  +   M   
Sbjct: 610 AFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGT 669

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRF-FEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
           G  P+  TY+IL+  L       +  +    ++   N+  D    NT ++      + G 
Sbjct: 670 GCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVD----NTDIWS---KIDFGI 722

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
             +LF+++     VP + TY+ LI+GLC+ G L VA  L  +M   GI P  I +  +++
Sbjct: 723 TTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLS 782

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
             CK+G    A    + M+         +Y   I G  +  +  +A  +   +L  G+  
Sbjct: 783 SCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNY 842

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
           D + + VL+ GL K G +++ +ELL  M  +G      TY+ ++ 
Sbjct: 843 DEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQ 887


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 187/656 (28%), Positives = 316/656 (48%), Gaps = 55/656 (8%)

Query: 90  PELL---VRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWV 146
           P LL   V  + + ++ P  AL  F  V+ + G K     +  ++E L   G   +   V
Sbjct: 3   PALLPKHVAAVVKYQKNPLKALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEV 62

Query: 147 V-ETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLL 205
           + ET + ++ +G+L+ +  G + +             Y +K  +++ + VF +M      
Sbjct: 63  LAETRMNID-NGLLEGVYIGAMRN-------------YGRKGKIQEAVDVFERMDFFNCE 108

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK---------- 255
           P V++ N I+ +L +  +  +A +VY  M + GI P + T+   + SFC+          
Sbjct: 109 PSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRL 168

Query: 256 -------------------------EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
                                    E    EA EL  EM G G  P+ + +N LI    R
Sbjct: 169 LNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCR 228

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
            G ++++  L+  +LK G+  +  + N  I G+ ++ +L EA+ L +  V RG+ P + T
Sbjct: 229 KGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDG-VGRGLTPDVIT 287

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           YN LI GLCK  +V +A H   +M+ +   PD  +YN+++ GYC+ G +  A  +  +  
Sbjct: 288 YNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGA 347

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
            +  VP   TY +LI+GLC+ GD++ A  +    + +G+ P+++    +V G  + G + 
Sbjct: 348 FKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLIL 407

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            A +  NEM   G  PD + Y   I G  K+G  S+A  L  + +AKG  PD+ T+N L+
Sbjct: 408 QALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLI 467

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
            G CK   L+ A E++ +M   G  PD ITY SI++   + G        F  M+ KG  
Sbjct: 468 DGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCV 527

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           P ++TY +L  +     ++E A     EMQ KG+ P+V+ +  L+ G C    +D AY L
Sbjct: 528 PNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQL 587

Query: 651 FIDMEEEGILPNKY-TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           F  ++E+    +   TY I+IN      N   A +L+ +M +    PD  T+  ++
Sbjct: 588 FKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMI 643



 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 153/504 (30%), Positives = 262/504 (51%), Gaps = 2/504 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F +ML  G+ PD+   N++I  L   G   ++  +   + + G+ P++ T N  +  FC
Sbjct: 203 LFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFC 262

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           +   + EA+ LL +  GRG +P+ +TYN LI G  +N ++ +A   +R M+  G +    
Sbjct: 263 QRAMLNEAIRLL-DGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGF 321

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +YN II GY + G++  A  +  +   +G  P  +TY  LI GLC+ G +  A + F E 
Sbjct: 322 TYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEA 381

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           + K + P+++  NTL+ G  + G I +A  L +E+      P + TYN +I+GLC+ G +
Sbjct: 382 MEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCV 441

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
             A  L  + I +G LPDV T+  +++G CK   L  A E  + M   G+ PD   Y + 
Sbjct: 442 SDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSI 501

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           + G  K G   +     + M+ KG  P++ITYN+L    CK   +EEA  L+ +M   G 
Sbjct: 502 LNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGL 561

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK-GLSPTLVTYTVLIHAHAARGRLELAF 613
            PD + + +++    + GDL     LF  +  +   S T+ TY ++I+A A +  + +A 
Sbjct: 562 TPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAE 621

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
             F++M   G  P+  TY  +I+G C+   I+  Y   +   E+G++P+  T+  ++N  
Sbjct: 622 KLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCL 681

Query: 674 CNAGNWQEALRLYKEMLDREIEPD 697
           C      EA+ +   M+ + I P+
Sbjct: 682 CLKRRVHEAVGIIHLMVHKGIVPE 705



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 141/456 (30%), Positives = 245/456 (53%), Gaps = 2/456 (0%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
           +++ +  + +++M+ + + + + + R GL PDV   N +I  L  N   V+A    R M 
Sbjct: 254 VNIFIQGFCQRAMLNEAIRLLDGVGR-GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMV 312

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
             G +P   TYN+++D +CK G MQ A ++L +   +G  P+  TY  LI G  ++G+++
Sbjct: 313 NEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDID 372

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
           +A  +  + ++ GLK +    N ++ G S++GL+++AL L  EM   G +P + TYN++I
Sbjct: 373 RAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVI 432

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
            GLCK G VSDA +   + + K  +PD+ ++NTL+ GYC+   +  A  + D + +  + 
Sbjct: 433 NGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVS 492

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P V+TYN++++GLC+ G  E      + M+ +G +P++ITY I+    CK   +  A   
Sbjct: 493 PDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNL 552

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK-GFPPDLITYNVLVHGLC 534
             EM  KGL PD   + T + G    GD   AY+L + +  +  F   + TYN++++   
Sbjct: 553 IEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFA 612

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
              ++  A +L  KM  +GF PD  TY  +I    + G++  G       + KGL P+L 
Sbjct: 613 GKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLT 672

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
           T+  +++    + R+  A      M  KGI P V+ 
Sbjct: 673 TFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEVVN 708



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 13/180 (7%)

Query: 552 DGFIPDHITYTSII-----HASLEMGD--LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           DGF    +TY  +I     H   E  +  L   R   +N L +G+      Y   +  + 
Sbjct: 34  DGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLLEGV------YIGAMRNYG 87

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
            +G+++ A   F  M      P+V +YNA++N L   R  DQA+ +++ M ++GI+P+ Y
Sbjct: 88  RKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVY 147

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           T+TI +   C       A RL   M  +  E     +  ++    +++++V A E  E +
Sbjct: 148 TFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEM 207


>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
 gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
          Length = 1039

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 187/633 (29%), Positives = 305/633 (48%), Gaps = 50/633 (7%)

Query: 104 PRIALRFFRWVETQPGVKRDEFVFCTILEILIES-GLLRSAYWVVETVVCV----NMHGI 158
           P  AL FF WV  +PG +        +L++L            VV  + C     +M   
Sbjct: 70  PATALAFFEWVARRPGFRHTAASHAALLQLLARRRAPANYDKLVVSMISCSGTAEDMREA 129

Query: 159 LDVLIG----GGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRI 214
           +D +      GG    +S K  +L L    +  M E    +++++++ GLLPD       
Sbjct: 130 VDAIQAIRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDT------ 183

Query: 215 IKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGC 274
                                        VTYNTM+ ++CKEG +  A      ++  G 
Sbjct: 184 -----------------------------VTYNTMIMAYCKEGSLAIAHRYFRLLRESGM 214

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
             +  T N L+ G+ R G+L +A  L+  M  +G + + +SY  +I G  E   + EAL 
Sbjct: 215 EMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALV 274

Query: 335 LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
           L   M+  G +P L TY +LI GLCK GR+ DAR    EM R+ V+P + +YN ++ GYC
Sbjct: 275 LLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYC 334

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
           +SG + +A  +   +      P   TYN+LI GLC  G  + A++L    I +G  P VI
Sbjct: 335 KSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLCG-GKPDEAEELLNGAIARGFSPTVI 393

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
           T+T ++NG CK   +  A    + M+    + D  AY   I+  +K     EA     E+
Sbjct: 394 TFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEI 453

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
            A G  P+++ Y  ++   CK+G +  A E+ +    +G  P+  TY+S+I+  ++   L
Sbjct: 454 FANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKL 513

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
            +   L   M   G++P ++TYT LI     +   + AF  F  M+  G+ P+   YN L
Sbjct: 514 HKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVL 573

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
            + LC+  R ++AY   +   ++G++  K TYT L++    AGN + A  L ++M++   
Sbjct: 574 TDALCKSGRAEEAYSFLV---KKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGC 630

Query: 695 EPDYCTHSALLLKQLDKDYKVH-AVEYLESLTL 726
           + D  T+S +LL+ L K  K++ A+  L+ +TL
Sbjct: 631 KADSHTYS-VLLQALCKQKKLNEALSILDQMTL 662



 Score =  255 bits (651), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 180/651 (27%), Positives = 293/651 (45%), Gaps = 70/651 (10%)

Query: 106 IALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVV---CVNMHGILDVL 162
           IA R+FR +  + G++ D +    +L     +G LR A W++  +    C        +L
Sbjct: 201 IAHRYFRLLR-ESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTIL 259

Query: 163 IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG 222
           I G                   +   V + L++   ML++G  P++     +I+ L   G
Sbjct: 260 IQG-----------------LCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEG 302

Query: 223 FSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYN 282
               AR +   M   G+ PS+ TYN M+D +CK G +++AL +   M+G GC+P+  TYN
Sbjct: 303 RIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYN 362

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
            LI G    G+ ++A  L+   +  G   +  ++  II GY +   + +AL ++  M++ 
Sbjct: 363 SLIHGLC-GGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISS 421

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
                L  Y +LI  L K  R+ +A+    E+    + P+++ Y +++  YC+ G +G A
Sbjct: 422 KCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAA 481

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
             +F         P   TY++LI GL +   L  A  L   M   GI P VITYT ++ G
Sbjct: 482 LEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQG 541

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPD--------------------------------RFA 490
            CK      A   F  M + GL PD                                +  
Sbjct: 542 QCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVKKGVVLTKVT 601

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           YT+ + G  K G+T  A  L E+M+ +G   D  TY+VL+  LCK   L EA  +L +M 
Sbjct: 602 YTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMT 661

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
             G   + + YT II   ++ G     + +FN M+  G  P+ +TYTV I ++   GR+E
Sbjct: 662 LRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIE 721

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
            A     EM+  G+ P+V+TYN  ING   +  +D A+     M +    PN +TY +L+
Sbjct: 722 EAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLL 781

Query: 671 N-------------ENCNAGNW---QEALRLYKEMLDREIEPDYCTHSALL 705
                         +     NW       +L + M+   + P   T+S+++
Sbjct: 782 KHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSII 832



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 159/594 (26%), Positives = 267/594 (44%), Gaps = 74/594 (12%)

Query: 162 LIGGGLSSCVSIKILDLLLLI--YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLR 219
           L+ G ++   S  ++    +I  Y K   ++  L V + M+ +    D++    +I VL 
Sbjct: 379 LLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLI 438

Query: 220 DNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGV 279
                 +A++    +   G+ P++V Y +++D++CK G++  ALE+    +  GC PN  
Sbjct: 439 KKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAW 498

Query: 280 TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
           TY+ LI G  ++ +L                                    +A+ L  +M
Sbjct: 499 TYSSLIYGLIQDQKLH-----------------------------------KAMALITKM 523

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN-VIPDIISYNTLLYGYCRSGN 398
              G+ P + TY  LI G CK     +A  R FEM+ +N + PD  +YN L    C+SG 
Sbjct: 524 QEDGITPGVITYTTLIQGQCKKHEFDNA-FRLFEMMEQNGLTPDEQAYNVLTDALCKSGR 582

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
             EA+     L  + +V T VTY +L+DG  + G+ E A  L E M+N+G   D  TY++
Sbjct: 583 AEEAYSF---LVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSV 639

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           ++   CK   L+ A    ++M  +G++ +  AYT  I+  +K G    A  +  EM++ G
Sbjct: 640 LLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSG 699

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
             P  ITY V +   CK+G +EEA  L+ +M  +G  PD +TY   I+    MG +    
Sbjct: 700 HKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAF 759

Query: 579 DLFNNMLRKGLSPTLVTYTVLI---------HAHAARG-------RLELAFMYFSEMQVK 622
                M+     P   TY +L+         +AH           +L+  +     M   
Sbjct: 760 STLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKH 819

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
           G+ P  +TY+++I G C+  R+++A  L   M  + I PN+  YT+LI   C+   +++A
Sbjct: 820 GLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKA 879

Query: 683 LRLYKEMLDREIEP----------------DYCTHSALLLKQLDKDYKVHAVEY 720
                 M++   +P                DY    AL    L+ DY  + V +
Sbjct: 880 ASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAW 933



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 148/550 (26%), Positives = 241/550 (43%), Gaps = 31/550 (5%)

Query: 159 LDVLIGGGLSSCVSI--KILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK 216
           L+ +   GLS  V I   I+D     Y K   V   L VF      G  P+    + +I 
Sbjct: 450 LNEIFANGLSPNVVIYTSIID----AYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIY 505

Query: 217 VLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSP 276
            L  +    KA  +   M E GI P ++TY T++   CK+ E   A  L   M+  G +P
Sbjct: 506 GLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTP 565

Query: 277 NGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLE 336
           +   YNVL     ++G  E+A      ++K G+ ++  +Y  ++ G+S+ G    A  L 
Sbjct: 566 DEQAYNVLTDALCKSGRAEEAYSF---LVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALI 622

Query: 337 EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS 396
           E+MV  G      TY++L+  LCK  ++++A     +M  + V  +I++Y  ++    + 
Sbjct: 623 EKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKE 682

Query: 397 GNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
           G    A  +F+E+ S    P+ +TY   I   C+ G +E A  L   M   G+ PDV+TY
Sbjct: 683 GKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTY 742

Query: 457 TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG-------DTS---- 505
            + +NG   MG +  A      M+    +P+ + Y   +   LK+        DTS    
Sbjct: 743 NVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWN 802

Query: 506 -----EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
                  ++L E M+  G  P  +TY+ ++ G CK   LEEA  LL  M+G    P+   
Sbjct: 803 WIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEI 862

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           YT +I    ++    +      NM+  G  P L +Y  LI      G  + A   F ++ 
Sbjct: 863 YTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLL 922

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
                 N + +  L +GL +   +D    L   ME      +  TY+++ N      N  
Sbjct: 923 EMDYNHNEVAWKILNDGLLKAGHVDICSQLLSAMENRHCRIDSETYSMVTN------NIH 976

Query: 681 EALRLYKEML 690
           EA  +Y+  +
Sbjct: 977 EASGMYESYM 986


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 165/606 (27%), Positives = 295/606 (48%), Gaps = 11/606 (1%)

Query: 104 PRIALRFFRWVE-TQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVV--CVNMHGI-- 158
           P IAL+FF  +   +PG K        +L+ILI + L      +  +++  CV++  I  
Sbjct: 99  PNIALQFFNSLPLIKPGFKHTVKSHSFLLKILIPNNLFGVGEKIRISMIKACVSVDDIRF 158

Query: 159 -LDVL-----IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCN 212
            LD L         +   +S++  + LL++  +  M+++   V+ +ML + ++P++   N
Sbjct: 159 LLDFLRQMNRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLN 218

Query: 213 RIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR 272
            ++      G  V+A      + + G+ P   TY +++  +C+  ++  A ++   M  +
Sbjct: 219 TMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNK 278

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA 332
           GC  N V+Y  +I G    G +++   L + M +     +  +Y  II         +E 
Sbjct: 279 GCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEG 338

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
           ++L  EM  R   P + TY +++  +CK  ++ ++R    EM+ K ++P +++YN L+ G
Sbjct: 339 MDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRG 398

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
           YC  G I  A  +   + S N  P   TYN LI G  +   +  A  L   M+   + P 
Sbjct: 399 YCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPS 458

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
           ++TY  +++  CK G+   A +  + +   GL PD++ Y+  I    K     EA  L  
Sbjct: 459 LVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFN 518

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
            +  KG   + + Y  L+ G CK G ++EA  LL +M  +  +P+  TY S+I+   + G
Sbjct: 519 SLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEG 578

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
            ++ G  +  NM + G+ PT+ TYT+LI      G  + A   F++M   G +P+V TY 
Sbjct: 579 KVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYT 638

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
           A I+  C    + +A G+   M E G++P+  TYT+LI+     G   +A  + K MLD 
Sbjct: 639 AFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDA 698

Query: 693 EIEPDY 698
             +P +
Sbjct: 699 GCDPSH 704



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 132/478 (27%), Positives = 232/478 (48%)

Query: 228 REVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITG 287
           R++ R   +   K S+ +YN +L    +   + E   +  EM      PN  T N ++  
Sbjct: 164 RQMNRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNA 223

Query: 288 FSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPT 347
           +S+ G + +A   +  + + GL   + +Y  +I GY     +  A  +   M  +G    
Sbjct: 224 YSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRN 283

Query: 348 LATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFD 407
             +Y  +I+GLC+ GR+ +    F +M   +  P + +Y  +++    +    E   LF+
Sbjct: 284 EVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFN 343

Query: 408 ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG 467
           E+R R+  P V TY  ++D +C+   L+ ++++   M+ +G++P V+TY  ++ G C+ G
Sbjct: 344 EMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEG 403

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
            +  A E    M     +P+   Y   I G  K     +A  L  +ML     P L+TYN
Sbjct: 404 RIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYN 463

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
            L+H  CK G  + A +LL  +  +G +PD  TY+  I    +   +    DLFN++  K
Sbjct: 464 SLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEK 523

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
           G+    V YT LI  H   G+++ A      M  +   PN  TYN+LI G+C+  ++ + 
Sbjct: 524 GIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEG 583

Query: 648 YGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             +  +M + G+ P   TYTILI E    G++  A R++ +M+    +PD  T++A +
Sbjct: 584 LSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFI 641



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/437 (31%), Positives = 209/437 (47%), Gaps = 3/437 (0%)

Query: 280 TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
           +YN L+   +R   +++ + +  +ML   +  + ++ N ++  YS+ G +VEA     ++
Sbjct: 181 SYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKI 240

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
              G++P   TY  LI G C+   V+ A   F  M  K    + +SY T+++G C +G I
Sbjct: 241 FQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRI 300

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
            E   LF ++R  +  PTV TY  +I  L           L   M  +   P+V TYT+M
Sbjct: 301 DEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVM 360

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           V+  CK   L  +R   NEM+ KGL P    Y   I G  + G    A  +   M +   
Sbjct: 361 VDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNC 420

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
            P+  TYN L+ G  K   + +A  LL KM+     P  +TY S+IH   + G       
Sbjct: 421 RPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYK 480

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
           L + +   GL P   TY+V I       R+E A   F+ ++ KGI+ N + Y ALI+G C
Sbjct: 481 LLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHC 540

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
           +  +ID+A  L   M  E  LPN  TY  LI   C  G  QE L + + M    ++P   
Sbjct: 541 KAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVA 600

Query: 700 THSAL---LLKQLDKDY 713
           T++ L   +L++ D D+
Sbjct: 601 TYTILIEEMLREGDFDH 617



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/304 (33%), Positives = 161/304 (52%), Gaps = 5/304 (1%)

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
           +V +YN L+  L R+  ++  +++   M+N  I+P++ T   MVN   KMGN+  A  + 
Sbjct: 178 SVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYV 237

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           +++ + GL PD F YT+ I G  +  D + AY++   M  KG   + ++Y  ++HGLC+ 
Sbjct: 238 SKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEA 297

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G ++E   L +KM  D   P   TYT IIHA         G DLFN M  +   P + TY
Sbjct: 298 GRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTY 357

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
           TV++ A     +L+ +    +EM  KG+ P+V+TYNALI G C   RI+ A  +   ME 
Sbjct: 358 TVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMES 417

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQ-----LDK 711
               PN+ TY  LI       +  +A+ L  +ML+ ++ P   T+++L+  Q      D 
Sbjct: 418 NNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDS 477

Query: 712 DYKV 715
            YK+
Sbjct: 478 AYKL 481



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 70/151 (46%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P+  TYN+++   CKEG++QE L ++  M   G  P   TY +LI    R G+ + A  +
Sbjct: 562 PNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRV 621

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
              M+  G K   ++Y   I  Y   G + EA  +   M+  GV P   TY +LI    +
Sbjct: 622 FNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYER 681

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
            G   DA +    ML     P    +N L++
Sbjct: 682 LGLAYDAFNVLKRMLDAGCDPSHPIWNNLIW 712



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 84/174 (48%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K   +++ + +  +M     LP+    N +I  +   G   +   +   M + G+KP+
Sbjct: 539 HCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPT 598

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           + TY  +++   +EG+   A  +  +M   G  P+  TY   I  +  +G +++A G++ 
Sbjct: 599 VATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMA 658

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
            M++ G+   + +Y  +I  Y   GL  +A N+ + M+  G  P+   +N LI+
Sbjct: 659 RMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLIW 712


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 162/567 (28%), Positives = 286/567 (50%), Gaps = 3/567 (0%)

Query: 155 MHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRI 214
           +H + D   GG     VS    + +L  + K+   ++    +++ML  G+LPDV   + I
Sbjct: 186 LHMMADDRGGGSPPDVVS---YNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSI 242

Query: 215 IKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGC 274
           I  L       KA EV   M + G+ P  +TYN++L  +C  G+ +EA+  L +M+  G 
Sbjct: 243 IAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGV 302

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
            PN VTY+ L+    +NG   +AR +   M K GL+    +Y  ++ GY+ KG LVE   
Sbjct: 303 EPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHA 362

Query: 335 LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
           L + MV  G+ P    +NILI    K  +V  A   F +M +  + P+++ Y T++   C
Sbjct: 363 LLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLC 422

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
           +SG++ +A L F+++    L P ++ Y +LI GLC     + A++L   M+++GI  + I
Sbjct: 423 KSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTI 482

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
            +  +++  CK G +  + + F+ M+R G++PD   Y T I G    G   EA +L   M
Sbjct: 483 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASM 542

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
           ++ G  PD++TY  L++G C++  +++A  L ++MV  G  P+ ITY  I+         
Sbjct: 543 VSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRT 602

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
              ++L+ ++ + G    L TY +++H        + A   F  + +  ++    T+N +
Sbjct: 603 AAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 662

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           I  L +  R+D+A  LF      G++P+  TY+++       G+ +E   L+  M +   
Sbjct: 663 IGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGC 722

Query: 695 EPDYCTHSALLLKQLDKDYKVHAVEYL 721
             D    ++++ K L +     A  YL
Sbjct: 723 SADSRMLNSIVRKLLQRGDITRAGTYL 749



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 153/500 (30%), Positives = 251/500 (50%), Gaps = 3/500 (0%)

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM---QGRGCSPNGVTYNVLIT 286
           V R M E G  P + +YN +L   C E   QEALELL  M   +G G  P+ V+YN ++ 
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           GF + G+ ++A     +ML  G+     +Y+ II    +   + +A+ +   MV  GV P
Sbjct: 210 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMP 269

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
              TYN +++G C  G+  +A     +M    V P++++Y++L+   C++G   EA  +F
Sbjct: 270 DCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIF 329

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
           D +  R L P + TY TL+ G    G L     L + M+  GI PD   + I++    K 
Sbjct: 330 DSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQ 389

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
             +  A   F++M + GL P+   Y T I    K G   +A    E+M+ +G  P++I Y
Sbjct: 390 EKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVY 449

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
             L+HGLC     ++A EL+ +M+  G   + I + SII +  + G +     LF+ M+R
Sbjct: 450 TSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVR 509

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
            G+ P ++TY  LI      G+++ A    + M   G++P+++TY  LING CR+ R+D 
Sbjct: 510 IGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDD 569

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
           A  LF +M   G+ PN  TY I++    +      A  LY  +     + +  T++ +L 
Sbjct: 570 ALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILH 629

Query: 707 KQLDKDYKVHAVEYLESLTL 726
                +    A+   ++L L
Sbjct: 630 GLCKNNLTDEALRMFQNLCL 649



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 151/552 (27%), Positives = 263/552 (47%), Gaps = 41/552 (7%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM--GEFGIKPSIVTYNTMLDS 252
           VF+++LR G    +   NR +  +  +  +       RM   G   + P++ TY  ++  
Sbjct: 42  VFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIGC 101

Query: 253 FCKEGEM-----------------------------------QEALEL-LWEMQGRGCSP 276
            C+ G +                                    +A+++ L  M   GC P
Sbjct: 102 CCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIP 161

Query: 277 NGVTYNVLITGFSRNGELEQARGLIRDMLKL---GLKVSAHSYNPIICGYSEKGLLVEAL 333
           +  +YN L+ G       ++A  L+  M      G      SYN ++ G+ ++G   +A 
Sbjct: 162 DVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAY 221

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
           +   EM+ RG+ P + TY+ +I  LCK   +  A      M++  V+PD ++YN++L+GY
Sbjct: 222 STYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGY 281

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
           C SG   EA     ++RS  + P VVTY++L++ LC+ G    A+++ ++M  +G+ PD+
Sbjct: 282 CSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDI 341

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
            TY  ++ G    G L       + M+R G+QPD   +   I    K     +A  +  +
Sbjct: 342 ATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSK 401

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           M   G  P+++ Y  ++  LCK GS+++A     +M+ +G  P+ I YTS+IH       
Sbjct: 402 MRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDK 461

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
             +  +L   ML +G+    + +  +I +H   GR+  +   F  M   G++P++ITYN 
Sbjct: 462 WDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNT 521

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
           LI+G C   ++D+A  L   M   G+ P+  TY  LIN  C      +AL L+KEM+   
Sbjct: 522 LIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSG 581

Query: 694 IEPDYCTHSALL 705
           + P+  T++ +L
Sbjct: 582 VSPNIITYNIIL 593



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 139/508 (27%), Positives = 250/508 (49%), Gaps = 36/508 (7%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   +++ + V N M++NG++PD    N I+     +G   +A    + M   G++P++V
Sbjct: 248 KAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVV 307

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY+++++  CK G   EA ++   M  RG  P+  TY  L+ G++  G L +   L+  M
Sbjct: 308 TYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLM 367

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           ++ G++   H +N +IC Y+++  + +A+ +  +M   G+ P +  Y  +I  LCK G V
Sbjct: 368 VRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSV 427

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYG-------------------------------- 392
            DA   F +M+ + + P+II Y +L++G                                
Sbjct: 428 DDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSI 487

Query: 393 ---YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
              +C+ G + E+  LFD +    + P ++TYNTLIDG C  G ++ A +L  +M++ G+
Sbjct: 488 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGV 547

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
            PD++TY  ++NG C++  +  A   F EM+  G+ P+   Y   + G      T+ A  
Sbjct: 548 KPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKE 607

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           L   +   G   +L TYN+++HGLCK    +EA  + + +       +  T+  +I A L
Sbjct: 608 LYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 667

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
           + G +   +DLF      GL P + TY+++      +G LE     F  M+  G   +  
Sbjct: 668 KCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSR 727

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEE 657
             N+++  L +   I +A G ++ M +E
Sbjct: 728 MLNSIVRKLLQRGDITRA-GTYLFMIDE 754



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 136/442 (30%), Positives = 204/442 (46%), Gaps = 43/442 (9%)

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG---VAPTLATY 351
           E AR +  ++L+ G   S +  N  +   +       A++    M   G   V PT+ TY
Sbjct: 37  EDARHVFDELLRRGRGASIYGLNRALADVARHSP-AAAVSRYNRMARAGAGKVTPTVHTY 95

Query: 352 NILI-----------------------------------YGLCKWGRVSDARHRFF-EML 375
            ILI                                    GLC   R SDA       M 
Sbjct: 96  AILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMT 155

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL---RSRNLVPTVVTYNTLIDGLCRYG 432
               IPD+ SYN LL G C      EA  L   +   R     P VV+YNT+++G  + G
Sbjct: 156 ELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEG 215

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
           D + A      M+++GILPDV+TY+ ++   CK   +  A E  N M++ G+ PD   Y 
Sbjct: 216 DSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 275

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
           + + G    G   EA    ++M + G  P+++TY+ L++ LCK G   EA ++   M   
Sbjct: 276 SILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKR 335

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
           G  PD  TY +++      G L     L + M+R G+ P    + +LI A+A + +++ A
Sbjct: 336 GLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQA 395

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
            + FS+M+  G+ PNV+ Y  +I+ LC+   +D A   F  M +EG+ PN   YT LI+ 
Sbjct: 396 MLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHG 455

Query: 673 NCNAGNWQEALRLYKEMLDREI 694
            C    W +A  L  EMLDR I
Sbjct: 456 LCTCDKWDKAEELILEMLDRGI 477



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 78/186 (41%), Gaps = 42/186 (22%)

Query: 581 FNNMLRKG---LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
           +N M R G   ++PT+ TY +LI      GRL+L F     +  KG R + IT+  L+ G
Sbjct: 77  YNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKG 136

Query: 638 LCRLRRIDQAYGLFI-DMEEEGILPNKYTYTILINENCNAGNWQEALRL----------- 685
           LC  +R   A  + +  M E G +P+ ++Y  L+   C+    QEAL L           
Sbjct: 137 LCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGG 196

Query: 686 ---------------------------YKEMLDREIEPDYCTHSALLLKQLDKDYKVHAV 718
                                      Y EMLDR I PD  T+S+++           A+
Sbjct: 197 SPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAM 256

Query: 719 EYLESL 724
           E L ++
Sbjct: 257 EVLNTM 262


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 153/476 (32%), Positives = 265/476 (55%), Gaps = 10/476 (2%)

Query: 204 LLPDVKNCNRIIKVLRDNGFSVKAR-------EVYRMMGEFGIKPSIVTYNTMLDSFCKE 256
           LL + KN N+I  +L  + F+  A            ++G +G   SI+  + ++ ++ K 
Sbjct: 116 LLANAKNYNKIRALL--DSFAKNAHYSNSTIFHSLSVLGSWGCANSIIV-DMLVWAYVKN 172

Query: 257 GEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSY 316
           GEM  ALE        G   + ++ N ++    + G +     + ++M++  + V+  ++
Sbjct: 173 GEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTF 232

Query: 317 NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
           + +I G  + G   +A ++ E+M   G +P++ TYN +I G CK G++  A     EM+ 
Sbjct: 233 DVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVA 292

Query: 377 KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
           K + P+ I++N L+ G+CR  N+  A  +F+E++ + L P VVTYN+LI+GLC  G L+ 
Sbjct: 293 KRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDE 352

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
           A  L++ M   G+ P+V+TY  ++NG CK   L  ARE  +++ ++GL P+   + T I 
Sbjct: 353 ALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLID 412

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
              K G   +A+ L+  ML  G  P++ TYN L+ G C+ G+++EA +L ++M G+G   
Sbjct: 413 AYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKA 472

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
           D +TY  ++ A  + G+ R+   L + M   GL+P+ +TY  LI  +   G    A    
Sbjct: 473 DLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVR 532

Query: 617 SEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
           + M+ KG R N++TYN LI G C   ++++A  L  +M E+G++PN+ TY IL +E
Sbjct: 533 TLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDE 588



 Score =  265 bits (678), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 167/569 (29%), Positives = 278/569 (48%), Gaps = 65/569 (11%)

Query: 52  PESESYYKELIISTVEEKPWAFCNNRWVSDHFQAVV--SDPELLVRVLNRIREKPRIALR 109
           P S ++    I   + ++ W+           + +V  ++P  L++ L     +P + L 
Sbjct: 42  PNSHTFDTPTISQLIAKQHWS---------KLKTIVKETNPSSLLQHLFNSEAQPDLILC 92

Query: 110 FFRWVETQPGVKRDEFVFCTILEILIES-----------GLLRSAYWVVETVVCVNMHGI 158
           +F+W + + G   +   FC +L +L  +              ++A++   T+     H  
Sbjct: 93  YFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTI----FHS- 147

Query: 159 LDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL 218
           L VL   G   C +  I+D+L+  Y K   ++  L  F++    G      +CN ++  L
Sbjct: 148 LSVL---GSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSL 204

Query: 219 RDNG-----------------------FSV------------KAREVYRMMGEFGIKPSI 243
              G                       F V            KA +V   M  +G  PS+
Sbjct: 205 VKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSV 264

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           +TYNT++D +CK G+M +A  LL EM  +   PN +T+N+LI GF R+  +  A+ +  +
Sbjct: 265 ITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEE 324

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M + GL+ +  +YN +I G    G L EAL L+++M   G+ P + TYN LI G CK   
Sbjct: 325 MQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKM 384

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           + +AR    ++ ++ + P++I++NTL+  Y ++G + +AFLL   +    + P V TYN 
Sbjct: 385 LKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNC 444

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           LI G CR G+++ A++L + M   G+  D++TY I+V+  CK G    A    +EM   G
Sbjct: 445 LIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVG 504

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           L P    Y   I G  + G+++ A  ++  M  KG   +++TYNVL+ G C  G LEEAN
Sbjct: 505 LNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEAN 564

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMG 572
            LL +M+  G IP+  TY  +    +E G
Sbjct: 565 RLLNEMLEKGLIPNRTTYDILRDEMMEKG 593



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 171/341 (50%)

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
           I  + L++ Y ++G +  A   FD         + ++ N ++  L + G + V + + + 
Sbjct: 160 IIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKE 219

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           MI + I  +V+T+ +++NG CK+G    A +   +M   G  P    Y T I G  K G 
Sbjct: 220 MIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGK 279

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
             +A  L +EM+AK   P+ IT+N+L+ G C+  ++  A ++  +M   G  P+ +TY S
Sbjct: 280 MFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNS 339

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           +I+     G L     L + M   GL P +VTY  LI+    +  L+ A     ++  +G
Sbjct: 340 LINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRG 399

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
           + PNVIT+N LI+   +  R+D A+ L   M + G+ PN  TY  LI   C  GN +EA 
Sbjct: 400 LAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEAR 459

Query: 684 RLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           +L KEM    ++ D  T++ L+     K     AV  L+ +
Sbjct: 460 KLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEM 500



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 87/160 (54%)

Query: 170 CVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE 229
           C ++   + L++ + ++  V++   +  +M  NGL  D+   N ++  L   G + KA  
Sbjct: 436 CPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVR 495

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           +   M E G+ PS +TYN ++D + +EG    AL +   M+ +G   N VTYNVLI GF 
Sbjct: 496 LLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFC 555

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLL 329
             G+LE+A  L+ +ML+ GL  +  +Y+ +     EKG +
Sbjct: 556 NKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFI 595


>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
 gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 167/554 (30%), Positives = 282/554 (50%), Gaps = 29/554 (5%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           S+ + +LLL    K+  VE    ++  M+  G+ P     N +I+ L D+     ARE++
Sbjct: 111 SVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELF 170

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M E G KP+  T+  ++  +CK G   + LELL  M+  G  PN V YN +++ F R 
Sbjct: 171 DEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCRE 230

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR---GVA-PT 347
           G  + +  ++  M + GL     ++N  I    ++G +++A  +  +M      G+  P 
Sbjct: 231 GRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPN 290

Query: 348 LATYNILIYGLCKWGRVSDARHRFFEMLRKNV-IPDIISYNTLLYGYCRSGNIGEAFLLF 406
             TYN+++ G CK G + DA+   FE +R+N  +  + SYN  L G  R G   EA  + 
Sbjct: 291 SITYNLMLKGFCKVGLLEDAK-TLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVL 349

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
            ++  + + P++ +YN L+DGLC+ G L  A+ +   M   G+ PD +TY  +++G C +
Sbjct: 350 KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSV 409

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G +  A+    EM+R    P+ +     +    K+G  SEA  L  +M  KG+  D +T 
Sbjct: 410 GKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTC 469

Query: 527 NVLVHGLCKLGSLEEANELLRKM----------VGDGFI-------------PDHITYTS 563
           N++V GLC  G L++A E+++ M          +G+ +I             PD ITY++
Sbjct: 470 NIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYST 529

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           +++   + G     ++LF  M+ + L P  V Y + IH    +G++  AF    +M+ KG
Sbjct: 530 LLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKG 589

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
              ++ TYN+LI GL    +I + +GL  +M+E+GI PN  TY   I   C     ++A 
Sbjct: 590 CHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDAT 649

Query: 684 RLYKEMLDREIEPD 697
            L  EM+ + I P+
Sbjct: 650 NLLDEMMQKNIAPN 663



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 165/550 (30%), Positives = 257/550 (46%), Gaps = 38/550 (6%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +L+  Y K  + ++ L + N M   G+LP+    N I+      G +  + ++   M E 
Sbjct: 187 ILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREE 246

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG----CSPNGVTYNVLITGFSRNGE 293
           G+ P IVT+N+ + + CKEG++ +A  +  +M+         PN +TYN+++ GF + G 
Sbjct: 247 GLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGL 306

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           LE A+ L   + +     S  SYN  + G    G  +EA  + ++M  +G+ P++ +YNI
Sbjct: 307 LEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNI 366

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           L+ GLCK G +SDA+     M R  V PD ++Y  LL+GYC  G +  A  L  E+   N
Sbjct: 367 LMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN 426

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
            +P   T N L+  L + G +  A++L   M  +G   D +T  I+V+G C  G L  A 
Sbjct: 427 CLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAI 486

Query: 474 EFFNEMLRKGLQ-----------------------PDRFAYTTQIAGELKLGDTSEAYRL 510
           E    M   G                         PD   Y+T + G  K G  +EA  L
Sbjct: 487 EIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNL 546

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
             EM+ +   PD + YN+ +H  CK G +  A  +L+ M   G      TY S+I     
Sbjct: 547 FAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGI 606

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
              +     L + M  KG+SP + TY   I       ++E A     EM  K I PNV +
Sbjct: 607 KNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFS 666

Query: 631 YNALINGLCRLRRIDQAYGLF-----IDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           +  LI   C++   D A  +F     I  ++EG+      Y+++ NE   AG   +A  L
Sbjct: 667 FKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL------YSLMFNELLAAGQLLKATEL 720

Query: 686 YKEMLDREIE 695
            + +LDR  E
Sbjct: 721 LEAVLDRGFE 730



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 128/470 (27%), Positives = 211/470 (44%), Gaps = 77/470 (16%)

Query: 335 LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
           L ++MV  G+AP   T+N+LI  LC    V  AR  F EM  K   P+  ++  L+ GYC
Sbjct: 134 LYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYC 193

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV- 453
           ++G   +   L + + S  ++P  V YNT++   CR G  + ++++ E M  +G++PD+ 
Sbjct: 194 KAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIV 253

Query: 454 --------------------------------------ITYTIMVNGSCKMGNLSMAREF 475
                                                 ITY +M+ G CK+G L  A+  
Sbjct: 254 TFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTL 313

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
           F  +          +Y   + G ++ G   EA  + ++M  KG  P + +YN+L+ GLCK
Sbjct: 314 FESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCK 373

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
           LG L +A  ++  M  +G  PD +TY  ++H    +G +   + L   M+R    P   T
Sbjct: 374 LGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYT 433

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA-------- 647
             +L+H+    GR+  A     +M  KG   + +T N +++GLC    +D+A        
Sbjct: 434 CNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMR 493

Query: 648 --------------YGLFID-MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
                          GL  D + E   LP+  TY+ L+N  C AG + EA  L+ EM+  
Sbjct: 494 VHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGE 553

Query: 693 EIEPD----------YCTHSAL-----LLKQLDKDYKVHAVEYLESLTLG 727
           +++PD          +C    +     +LK ++K     ++E   SL LG
Sbjct: 554 KLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILG 603



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 195/449 (43%), Gaps = 59/449 (13%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V  +M   G+ P + + N ++  L   G    A+ +  +M   G+ P  VTY  +L  +C
Sbjct: 348 VLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYC 407

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
             G++  A  LL EM    C PN  T N+L+    + G + +A  L+R M + G  +   
Sbjct: 408 SVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTV 467

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVA-----------------------PTLATY 351
           + N I+ G    G L +A+ + + M   G A                       P L TY
Sbjct: 468 TCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITY 527

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL------- 404
           + L+ GLCK GR ++A++ F EM+ + + PD ++YN  ++ +C+ G I  AF        
Sbjct: 528 STLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEK 587

Query: 405 ----------------------------LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
                                       L DE++ + + P + TYNT I  LC    +E 
Sbjct: 588 KGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVED 647

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
           A  L + M+ + I P+V ++  ++   CK+ +  MA+E F   +    Q +   Y+    
Sbjct: 648 ATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL-YSLMFN 706

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
             L  G   +A  L E +L +GF      Y  LV  LCK   LE A+ +L KM+  G+  
Sbjct: 707 ELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGF 766

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNML 585
           D      +I    +MG+ +      + M+
Sbjct: 767 DPAALMPVIDGLGKMGNKKEANSFADKMM 795



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 67/295 (22%), Positives = 125/295 (42%), Gaps = 36/295 (12%)

Query: 194 LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMGEFGIKPSIVTYNTMLDS 252
           LV + ++ N  LPD+   + ++  L   G   +A+ ++  MMGE  ++P  V YN  +  
Sbjct: 510 LVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGE-KLQPDSVAYNIFIHH 568

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
           FCK+G++  A  +L +M+ +GC  +  TYN LI G     ++ +  GL+ +M + G+  +
Sbjct: 569 FCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPN 628

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK------------ 360
             +YN  I    E   + +A NL +EM+ + +AP + ++  LI   CK            
Sbjct: 629 ICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFE 688

Query: 361 ----------------------WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
                                  G++  A      +L +        Y  L+   C+   
Sbjct: 689 TAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDE 748

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
           +  A  +  ++  R           +IDGL + G+ + A    + M+    + +V
Sbjct: 749 LEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMASVGEV 803



 Score = 44.7 bits (104), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 42/196 (21%), Positives = 87/196 (44%), Gaps = 1/196 (0%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           S++  + L+L    K+ + +   + ++M   G+ P++   N  I+ L +      A  + 
Sbjct: 593 SLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLL 652

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M +  I P++ ++  ++++FCK  +   A E ++E     C      Y+++       
Sbjct: 653 DEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQE-VFETAVSICGQKEGLYSLMFNELLAA 711

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G+L +A  L+  +L  G ++    Y  ++    +K  L  A  +  +M+ RG     A  
Sbjct: 712 GQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAAL 771

Query: 352 NILIYGLCKWGRVSDA 367
             +I GL K G   +A
Sbjct: 772 MPVIDGLGKMGNKKEA 787


>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
          Length = 822

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 160/504 (31%), Positives = 249/504 (49%), Gaps = 35/504 (6%)

Query: 203 GLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMGE------------------------- 236
           G LP+V +CNR++K+L +      AR++Y  M+GE                         
Sbjct: 164 GSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEG 223

Query: 237 ---------FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITG 287
                     G  P +V YN ++D +C+ G+M   L LL EM+ +G  P  VTY  LI  
Sbjct: 224 LKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINC 283

Query: 288 FSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPT 347
             + G+LE+   L  +M K GL  +   YN +I    +     +A+ + ++M   G  P 
Sbjct: 284 LGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPD 343

Query: 348 LATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFD 407
           + T+N LI GLC  G V  A H   E +R+ + P+ +SY  L++G+C  G +  A  L  
Sbjct: 344 IITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLM 403

Query: 408 ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG 467
           E+  R   P VVT+  LI GL   G +  A  ++E M  + + PDV  Y ++++G CK  
Sbjct: 404 EMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKH 463

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
            L  A+    EML K +QPD F Y T I G ++  +  +A ++ E M  KG  PD+++ N
Sbjct: 464 MLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCN 523

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
            ++ G C+ G + EA   +  M   G IPD  TYT++I    + G+L        +M+++
Sbjct: 524 AMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKR 583

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
              P +VTY+ LI+ +   G  + A   F+ MQ + + PNV+TY  LI  L +  ++ +A
Sbjct: 584 KCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRA 643

Query: 648 YGLFIDMEEEGILPNKYTYTILIN 671
              F  M      PN  T   L+N
Sbjct: 644 GLYFETMLLNHCSPNDVTLHYLVN 667



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 161/563 (28%), Positives = 276/563 (49%), Gaps = 32/563 (5%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           ++L+  Y ++  + + LL+  +M   G LP +     +I  L   G   K   ++  M +
Sbjct: 243 NVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRK 302

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G+ P++  YN+++D+ CK     +A+ +L +M   GC P+ +T+N LITG    G + +
Sbjct: 303 RGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRK 362

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A   +R+ ++  L  +  SY P+I G+  +G L+ A +L  EM+ RG  P + T+  LI+
Sbjct: 363 AEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIH 422

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           GL   G+VS+A     +M  + V PD+  YN L+ G C+   +  A  + +E+  +N+ P
Sbjct: 423 GLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQP 482

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
               Y TLIDG  R  +L  A+++ E M ++G+ PD+++   M+ G C+ G +S A    
Sbjct: 483 DEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCM 542

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           + M + G  PD F YTT I+G  K G+ + A R   +M+ +   P+++TY+ L++G CK 
Sbjct: 543 SNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKT 602

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G  + A  L   M  +   P+ +TYT +I +  +   + R    F  ML    SP  VT 
Sbjct: 603 GDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTL 662

Query: 597 TVLIHAHAA----------------RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
             L++   +                 G+  L  + F ++      P    YNA+I  LCR
Sbjct: 663 HYLVNGLTSCTPCVINSICCNTSEVHGKDAL-LVVFKKLVFDIGDPRNSAYNAIIFSLCR 721

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG---NWQ------------EALRL 685
              + +A      M ++G +PN  T+  L+   C+ G   NW+            E +  
Sbjct: 722 HNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSMNWRTILPNEFQQEEFEIIFR 781

Query: 686 YKEMLDREIEPDYCTHSALLLKQ 708
           YK + D+      C   + +L+Q
Sbjct: 782 YKFLFDQYATESVCCEVSRVLQQ 804


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 158/484 (32%), Positives = 252/484 (52%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P+V   N +I  L   G   +AR ++  M E G  P +VT+N+++D + K GE+ E  +L
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           + EM+  GC  + VTYN LI  F + G +E A G    M + G+  +  +++  +  + +
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
           +GL+ EA+ L  +M  RG+A    TY  LI G CK GR+ DA     EM+R+ V  ++++
Sbjct: 306 EGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVT 365

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           Y  L+ G C+   + EA  +   +    +    + Y TLI G     + E A  L   M 
Sbjct: 366 YTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMK 425

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
           N+G+  D+  Y  ++ G C +  L  A+    +M   GL+P+   YTT +    K G   
Sbjct: 426 NKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVP 485

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           EA  + +++L  GF P++ITY  L+ GLCK GS++EA     KM   G  P+   YT+++
Sbjct: 486 EAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALV 545

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
               + G L     LFN M+ KG+S   V YT L+  +  +G L  AF   ++M   G++
Sbjct: 546 DGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQ 605

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
            ++  Y   I+G C L  + +A  +F +M   GI P++  Y  LI++    GN +EA+ L
Sbjct: 606 LDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISL 665

Query: 686 YKEM 689
             EM
Sbjct: 666 QDEM 669



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 153/489 (31%), Positives = 255/489 (52%), Gaps = 5/489 (1%)

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
           + ++ VL D G    A      + E  + P+  T N +L    ++   +    L  ++  
Sbjct: 126 DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLP- 184

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
              +PN  T+N++I    + GEL +AR L   M ++G      ++N +I GY + G L E
Sbjct: 185 ---APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDE 241

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
              L EEM   G    + TYN LI   CK+GR+  A   F  M R+ V+ ++++++T + 
Sbjct: 242 VEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVD 301

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
            +C+ G + EA  LF ++R R +     TY  LIDG C+ G L+ A  L + M+ QG+  
Sbjct: 302 AFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL 361

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           +V+TYT++V+G CK   ++ A +    M + G++ +   YTT I G     ++ +A  L 
Sbjct: 362 NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLL 421

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
            EM  KG   D+  Y  L+ GLC +  L+EA  LL KM   G  P++I YT+++ A  + 
Sbjct: 422 SEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKS 481

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
           G +     +   +L  G  P ++TY  LI      G ++ A  +F++M+  G+ PNV  Y
Sbjct: 482 GKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAY 541

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
            AL++GLC+   +++A  LF +M  +G+  +K  YT L++     GN  +A  L  +M+D
Sbjct: 542 TALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMID 601

Query: 692 REIEPD-YC 699
             ++ D +C
Sbjct: 602 SGLQLDLFC 610



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 121/391 (30%), Positives = 200/391 (51%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
           F  M R G++ +V   +  +      G   +A +++  M   G+  +  TY  ++D  CK
Sbjct: 281 FAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCK 340

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
            G + +A+ LL EM  +G   N VTY VL+ G  +  ++ +A  ++R M K G++ +   
Sbjct: 341 AGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELL 400

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           Y  +I G+       +AL L  EM  +G+   ++ Y  LI GLC   ++ +A+    +M 
Sbjct: 401 YTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMD 460

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
              + P+ I Y T++    +SG + EA  +  ++      P V+TY  LIDGLC+ G ++
Sbjct: 461 ESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSID 520

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            A      M + G+ P+V  YT +V+G CK G L+ A + FNEM+ KG+  D+  YT  +
Sbjct: 521 EAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALL 580

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
            G LK G+  +A+ L+ +M+  G   DL  Y   + G C L  + EA E+  +M+G G  
Sbjct: 581 DGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIA 640

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           PD   Y  +I    ++G+L     L + M R
Sbjct: 641 PDRAVYNCLISKYQKLGNLEEAISLQDEMER 671


>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 194/734 (26%), Positives = 343/734 (46%), Gaps = 68/734 (9%)

Query: 21  LKKVRFFFPFCFSVHTYPSISESNNKDSVLNPESESYYKELIISTVEEKPWAFCNNRWVS 80
           L+ +R   PFC S   +P  SE        NP  E   + +  ST EE P        V+
Sbjct: 16  LRWLRNNKPFC-SQSRFPQESE--------NPSQEQ--RLVCGSTSEENP--------VT 56

Query: 81  DHFQAVVSDPEL-----LVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILI 135
                + + PE      ++ VL   R  P  ALRF+ W     G   D  VF  ++ IL+
Sbjct: 57  SKVSLLAAKPEQKDDASVIDVLLNRRNNPEAALRFYNWARPWRGSFEDGDVFWVLIHILV 116

Query: 136 ESGLL--RSAYWVVETVVCVNMHGILDVLIGGGLSSC------VSIKILDLLLLIYTKKS 187
            S     R++  ++  V   N   +  VL+   + S       V+ +  + LL  Y+K  
Sbjct: 117 TSPETYGRASDLLIRYVSTSNPTPMASVLVSNLVDSAKLFGFEVNSRAFNYLLNAYSKDR 176

Query: 188 MVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
             +  + + N+ML  G++P V   NR +  L       +A+E+Y  M   G+     T  
Sbjct: 177 QTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEAKELYSRMVAIGVDGDNGTTQ 236

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
            ++ +  +E +  EALE+      RG  P+ + Y++ +    +   L  A  L+R+M + 
Sbjct: 237 LLMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQACCKTLNLAMANSLLREMKEK 296

Query: 308 GLKV-SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
            L V S  +Y  +I    ++G + +A+  ++EMV+ G++  +     LI G CK   +  
Sbjct: 297 KLCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGS 356

Query: 367 ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
           A   F++M  +   P+ ++++ L+  + ++G + +A   + ++ S  L P+V   +T+I 
Sbjct: 357 ALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQ 416

Query: 427 G----------------------------------LCRYGDLEVAQQLKENMINQGILPD 452
           G                                  LC+ G ++ A +L   M ++GI P+
Sbjct: 417 GWLKGQKHEEALKLFDESFETGLANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPN 476

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
           V++Y  ++   C+  N+ +AR  F+ ML KGL+P+ + Y+  I G  K  D      +  
Sbjct: 477 VVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVN 536

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG-FIPDHITYTSIIHASLEM 571
           +M +     + + Y  +++GLCK+G   +A ELL  M+ +  F    ++Y SII   ++ 
Sbjct: 537 QMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKE 596

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
           G++      +  M   G+SP ++TYT L+       R++ A     EM+ KG++ ++  Y
Sbjct: 597 GEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAY 656

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
            ALI+G C+   ++ A  LF ++ EEG+ P++  Y  LI+   N GN   AL LYK+ML 
Sbjct: 657 GALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLK 716

Query: 692 REIEPDYCTHSALL 705
             +  D  T++ L+
Sbjct: 717 DGLRCDLGTYTTLI 730



 Score =  258 bits (659), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 171/613 (27%), Positives = 282/613 (46%), Gaps = 73/613 (11%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPD-------VKNC---------NRIIKVLRDN 221
           LL+    ++    + L VF++ +  G  PD       V+ C         N +++ +++ 
Sbjct: 237 LLMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQACCKTLNLAMANSLLREMKEK 296

Query: 222 GFSVKAREVYRM--------------------MGEFGIKPSIVTYNTMLDSFCKEGEMQE 261
              V ++E Y                      M   GI  ++V   +++   CK  ++  
Sbjct: 297 KLCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGS 356

Query: 262 ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC 321
           AL+L ++M+  G SPN VT++VLI  FS+NGE+E+A    + M  LGL  S    + II 
Sbjct: 357 ALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQ 416

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           G+ +     EAL L +E    G+A       IL + LCK G++  A     +M  + + P
Sbjct: 417 GWLKGQKHEEALKLFDESFETGLANVFICNTILSW-LCKQGKIDKATELLRKMESRGIGP 475

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           +++SYN ++  +CR  N+  A  +F  +  + L P   TY+ LIDG  +  D +   ++ 
Sbjct: 476 NVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVV 535

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREF-------------------------- 475
             M +  I  + + Y  ++NG CK+G  S ARE                           
Sbjct: 536 NQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIK 595

Query: 476 ----------FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
                     + EM   G+ P+   YT+ + G  K     +A  +++EM  KG   D+  
Sbjct: 596 EGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPA 655

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           Y  L+HG CK  ++E A+ L  +++ +G  P    Y S+I     +G++    DL+  ML
Sbjct: 656 YGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKML 715

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
           + GL   L TYT LI      G L LA   ++EMQ  G+ P+ I Y  ++NGL +  +  
Sbjct: 716 KDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFV 775

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +   +F +M++  + PN   Y  +I  +   GN  EA RL+ EMLD+ I PD  T   L+
Sbjct: 776 KVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 835

Query: 706 LKQLDKDYKVHAV 718
             ++ K   + A 
Sbjct: 836 SGKVGKFQPIRAA 848



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 73/144 (50%)

Query: 192 CLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLD 251
            L ++ KML++GL  D+     +I  L   G  + A ++Y  M   G+ P  + Y  +++
Sbjct: 707 ALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVN 766

Query: 252 SFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKV 311
              K+G+  + +++  EM+    +PN + YN +I G  R G L++A  L  +ML  G+  
Sbjct: 767 GLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILP 826

Query: 312 SAHSYNPIICGYSEKGLLVEALNL 335
              +++ ++ G   K   + A +L
Sbjct: 827 DGATFDILVSGKVGKFQPIRAASL 850


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 165/556 (29%), Positives = 288/556 (51%), Gaps = 13/556 (2%)

Query: 52  PESESYYKELIISTVEEKPWAFCNNRW--VSDHFQAVVSDPELLVRVLNRIREKPRIALR 109
           P   S ++ L IST+ E      N  W  +  HF+   + P + +  L        + LR
Sbjct: 9   PVQGSVFQSLSISTISE---LLSNQHWSELKPHFR--TTKPAIFLDQLFNAGVDSELVLR 63

Query: 110 FFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDV---LIGGG 166
           FF+W + +  +         +L +L  S         ++ +V    H +  V   L+ GG
Sbjct: 64  FFQWSQKEFRISYGLETTGKVLHLLANSKKYSKVRSFLDKLVKNEKHTVSSVFHSLLLGG 123

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
              C +  I D+L+L Y     +     VF ++   G    + +CN ++  L     + +
Sbjct: 124 DRPCANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGE 183

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
            + VY+ M +  I+P++ T+N  ++  CK G++ +A +++ +++  G SPN VTYN LI 
Sbjct: 184 MQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLID 243

Query: 287 GFSRN---GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG 343
           G  +    G++ +A  ++++ML   +  +  ++N +I G+ +   ++ A N  EEM  +G
Sbjct: 244 GHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQG 303

Query: 344 VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF 403
           + P + TYN LI GL   G++ +A   + +M+   + P+I+++N L+ G+C+   I EA 
Sbjct: 304 LKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEAR 363

Query: 404 LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
            LFD++  ++LVP  +T+NT+ID  C+ G +E    L  +M+++GI P+V TY  ++ G 
Sbjct: 364 KLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGL 423

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
           C+  N+  A++  NEM    L+ D   Y   I G  K G+ S+A +L  EML  G  P+ 
Sbjct: 424 CRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNH 483

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
           +TYN L+ G C  G+L+ A ++  +M  +G   + +TY  +I    + G L     L N 
Sbjct: 484 VTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNE 543

Query: 584 MLRKGLSPTLVTYTVL 599
           ML KGL+P   TY V+
Sbjct: 544 MLEKGLNPNRTTYDVV 559



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 135/445 (30%), Positives = 230/445 (51%), Gaps = 4/445 (0%)

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
           R C+ N +  ++L+  +  N E+  A  + R +   G K+S +S NP++    +     E
Sbjct: 125 RPCA-NALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGE 183

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
              + +EM+ R + P L T+NI I GLCK G+++ A     ++      P+I++YNTL+ 
Sbjct: 184 MQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLID 243

Query: 392 GYCRSGNIGEAF---LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
           G+C+ G+ G+ +    +  E+ +  + P  +T+NTLIDG C+  ++  A+   E M  QG
Sbjct: 244 GHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQG 303

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
           + P+++TY  ++NG    G L  A   +++M+  GL+P+   +   I G  K     EA 
Sbjct: 304 LKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEAR 363

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
           +L +++  +   P+ IT+N ++   CK G +EE   L   M+ +G  P+  TY  +I   
Sbjct: 364 KLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGL 423

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
               ++R  + L N M    L   +VTY +LI      G    A     EM   G++PN 
Sbjct: 424 CRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNH 483

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
           +TYN L++G C    +  A  +   ME+EG   N  TY +LI   C  G  ++A RL  E
Sbjct: 484 VTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNE 543

Query: 689 MLDREIEPDYCTHSALLLKQLDKDY 713
           ML++ + P+  T+  + L+ L+K +
Sbjct: 544 MLEKGLNPNRTTYDVVRLEMLEKGF 568



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 112/329 (34%), Positives = 178/329 (54%), Gaps = 16/329 (4%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +  +ML N + P+    N +I     +   + A+  +  M   G+KP+IVTYN++++   
Sbjct: 260 ILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLS 319

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
             G++ EA+ L  +M G G  PN VT+N LI GF +   +++AR L  D+ +  L  +A 
Sbjct: 320 NNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAI 379

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           ++N +I  + + G++ E   L   M+  G+ P ++TYN LI GLC+   V  A+    EM
Sbjct: 380 TFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEM 439

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
               +  D+++YN L+ G+C+ G   +A  L  E+ +  + P  VTYNTL+DG C  G+L
Sbjct: 440 ENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNL 499

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A +++  M  +G   +V+TY +++ G CK G L  A    NEML KGL P+R  Y   
Sbjct: 500 KAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTY--- 556

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
                      +  RL  EML KGF PD+
Sbjct: 557 -----------DVVRL--EMLEKGFIPDI 572



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 102/201 (50%), Gaps = 16/201 (7%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K  M+E+   + N ML  G+ P+V   N +I  L  N     A+++   M  + +K  
Sbjct: 388 FCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKAD 447

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +VTYN ++  +CK+GE  +A +LL EM   G  PN VTYN L+ G+   G L+ A  +  
Sbjct: 448 VVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRT 507

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M K G + +  +YN +I G+ + G L +A  L  EM+ +G+ P   TY+++        
Sbjct: 508 QMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVV-------- 559

Query: 363 RVSDARHRFFEMLRKNVIPDI 383
                     EML K  IPDI
Sbjct: 560 --------RLEMLEKGFIPDI 572


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 158/484 (32%), Positives = 252/484 (52%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P+V   N +I  L   G   +AR ++  M E G  P +VT+N+++D + K GE+ E  +L
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           + EM+  GC  + VTYN LI  F + G +E A G    M + G+  +  +++  +  + +
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
           +GL+ EA+ L  +M  RG+A    TY  LI G CK GR+ DA     EM+R+ V  ++++
Sbjct: 306 EGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVT 365

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           Y  L+ G C+   + EA  +   +    +    + Y TLI G     + E A  L   M 
Sbjct: 366 YTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMK 425

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
           N+G+  D+  Y  ++ G C +  L  A+    +M   GL+P+   YTT +    K G   
Sbjct: 426 NKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVP 485

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           EA  + +++L  GF P++ITY  L+ GLCK GS++EA     KM   G  P+   YT+++
Sbjct: 486 EAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALV 545

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
               + G L     LFN M+ KG+S   V YT L+  +  +G L  AF   ++M   G++
Sbjct: 546 DGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQ 605

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
            ++  Y   I+G C L  + +A  +F +M   GI P++  Y  LI++    GN +EA+ L
Sbjct: 606 LDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISL 665

Query: 686 YKEM 689
             EM
Sbjct: 666 QDEM 669



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 153/489 (31%), Positives = 255/489 (52%), Gaps = 5/489 (1%)

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
           + ++ VL D G    A      + E  + P+  T N +L    ++   +    L  ++  
Sbjct: 126 DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLP- 184

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
              +PN  T+N++I    + GEL +AR L   M ++G      ++N +I GY + G L E
Sbjct: 185 ---APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDE 241

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
              L EEM   G    + TYN LI   CK+GR+  A   F  M R+ V+ ++++++T + 
Sbjct: 242 VEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVD 301

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
            +C+ G + EA  LF ++R R +     TY  LIDG C+ G L+ A  L + M+ QG+  
Sbjct: 302 AFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL 361

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           +V+TYT++V+G CK   ++ A +    M + G++ +   YTT I G     ++ +A  L 
Sbjct: 362 NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLL 421

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
            EM  KG   D+  Y  L+ GLC +  L+EA  LL KM   G  P++I YT+++ A  + 
Sbjct: 422 SEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKS 481

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
           G +     +   +L  G  P ++TY  LI      G ++ A  +F++M+  G+ PNV  Y
Sbjct: 482 GKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAY 541

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
            AL++GLC+   +++A  LF +M  +G+  +K  YT L++     GN  +A  L  +M+D
Sbjct: 542 TALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMID 601

Query: 692 REIEPD-YC 699
             ++ D +C
Sbjct: 602 SGLQLDLFC 610



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 121/391 (30%), Positives = 200/391 (51%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
           F  M R G++ +V   +  +      G   +A +++  M   G+  +  TY  ++D  CK
Sbjct: 281 FAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCK 340

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
            G + +A+ LL EM  +G   N VTY VL+ G  +  ++ +A  ++R M K G++ +   
Sbjct: 341 AGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELL 400

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           Y  +I G+       +AL L  EM  +G+   ++ Y  LI GLC   ++ +A+    +M 
Sbjct: 401 YTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMD 460

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
              + P+ I Y T++    +SG + EA  +  ++      P V+TY  LIDGLC+ G ++
Sbjct: 461 ESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSID 520

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            A      M + G+ P+V  YT +V+G CK G L+ A + FNEM+ KG+  D+  YT  +
Sbjct: 521 EAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALL 580

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
            G LK G+  +A+ L+ +M+  G   DL  Y   + G C L  + EA E+  +M+G G  
Sbjct: 581 DGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIA 640

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           PD   Y  +I    ++G+L     L + M R
Sbjct: 641 PDRAVYNCLISKYQKLGNLEEAISLQDEMER 671


>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 170/562 (30%), Positives = 281/562 (50%), Gaps = 32/562 (5%)

Query: 173 IKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR 232
           I   +LL     K+S V+  + ++  M    + P     N +I  L + G+   AREV+ 
Sbjct: 118 ISFYNLLFRCSLKESRVDCVIWLYKDMAVAKVKPQTYTFNLLISALCEMGYLENAREVFD 177

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
            M E G KP+  +   ++  +C+ G     ++LL EM+  G  PN V YN +I+     G
Sbjct: 178 KMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEG 237

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA------LNLEEEMVTRGVAP 346
           +  +A  L+  M ++GL     ++N  I    + G ++EA      + ++EEM      P
Sbjct: 238 QTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGL--PKP 295

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
              TYN+++ G C  G   +AR   F+ ++ +    + SYN  + G  RSG + EA L+ 
Sbjct: 296 NTVTYNLMLEGFCSEGMFEEAR-AIFDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLIL 354

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
           +E+  +N+ P + +YN L+ GLC+YG    A+ +   M   G+ PD +TY+ +++G C+ 
Sbjct: 355 NEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRR 414

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G +  A     EM++ G  P+ +     +    K G  SEA  L + M  +G+  D +T 
Sbjct: 415 GKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTC 474

Query: 527 NVLVHGLCKLGSLEEANELLRKM----------VGDGFI-------------PDHITYTS 563
           N +++GLCK G+L++A E++  M          +G+ FI             PD ITY +
Sbjct: 475 NTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYAT 534

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           II    ++G +   +     M+ K LSP  + +   I+ +  +G+L  AF    EM+ KG
Sbjct: 535 IIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKG 594

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
              ++ TYN+LI GL    +I + YGL  +M+E GI PN YTY  +I+     G  ++A 
Sbjct: 595 CNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDAT 654

Query: 684 RLYKEMLDREIEPDYCTHSALL 705
            L  EML + I P+  T   L+
Sbjct: 655 CLLDEMLQKGISPNIYTFRILI 676



 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 186/633 (29%), Positives = 286/633 (45%), Gaps = 52/633 (8%)

Query: 120 VKRDEFVFCTILEILIESGLLRSAYWVVETVV---CVNMHGILDVLIGGGLSSCVSIKIL 176
           VK   + F  ++  L E G L +A  V + +    C      L +L+ G           
Sbjct: 149 VKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRG----------- 197

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
                 Y +  +    + + ++M  +G LP+    N +I  L   G +V+A ++   M E
Sbjct: 198 ------YCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMRE 251

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG----CSPNGVTYNVLITGFSRNG 292
            G+ P IVT+N  + + CK G++ EA  +  +MQ         PN VTYN+++ GF   G
Sbjct: 252 VGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEG 311

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
             E+AR +  D +K    +S  SYN  + G    G L+EA  +  EM  + + P L +YN
Sbjct: 312 MFEEARAIF-DSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYN 370

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
           IL++GLCK+G  SDAR     M    V PD ++Y+TLL+GYCR G I EA  +  E+   
Sbjct: 371 ILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQV 430

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
              P + T N L+  L + G    A+ L + M  +G   D +T   M+NG CK GNL  A
Sbjct: 431 GCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKA 490

Query: 473 REFFNEMLRKGLQ-----------------------PDRFAYTTQIAGELKLGDTSEAYR 509
            E  + M  +G                         PD   Y T I G  K+G   EA +
Sbjct: 491 IEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKK 550

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
              EM+ K   PD + ++  ++  CK G L  A  +L++M   G      TY S+I    
Sbjct: 551 KLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLG 610

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
               +     L + M  +G+ P + TY  +I   +  G+L+ A     EM  KGI PN+ 
Sbjct: 611 SENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIY 670

Query: 630 TYNALINGLCRLRRIDQAYGLF-IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
           T+  LI    +      A  LF I +   G    +  Y+ + NE    G   +A  L++ 
Sbjct: 671 TFRILIGAFFKACDFGAAQELFEIALSLCG--HKESLYSFMFNELLAGGETLKAKELFEA 728

Query: 689 MLDREIEPDYCTHSALLLKQLDKDYKVHAVEYL 721
            LDR +      +   L+++L KD K+    ++
Sbjct: 729 ALDRSLALKNFLYRD-LIEKLCKDGKLDDASFI 760



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 125/455 (27%), Positives = 209/455 (45%), Gaps = 57/455 (12%)

Query: 168 SSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKA 227
           S  +S++  ++ +L   +   + +  L+ N+M    + P++ + N ++  L   G    A
Sbjct: 326 SETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDA 385

Query: 228 REVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITG 287
           R +  +M E G+ P  VTY+T+L  +C+ G++ EA  +L EM   GC PN  T N+L+  
Sbjct: 386 RSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHS 445

Query: 288 FSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA-- 345
             + G   +A  L++ M + G  +   + N +I G  + G L +A+ +   M TRG A  
Sbjct: 446 LWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASL 505

Query: 346 ---------------------PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDII 384
                                P   TY  +I GLCK GRV +A+ +  EM+ K + PD +
Sbjct: 506 GNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSL 565

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
            ++T +Y YC+ G +  AF +  E+  +    ++ TYN+LI GL     +     L + M
Sbjct: 566 IFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEM 625

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
             +GI P+V TY  +++   + G L  A    +EML+KG+ P+ + +   I    K  D 
Sbjct: 626 KERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDF 685

Query: 505 SEAYRLQE------------------EMLAKG--------FPPDL--------ITYNVLV 530
             A  L E                  E+LA G        F   L          Y  L+
Sbjct: 686 GAAQELFEIALSLCGHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLI 745

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
             LCK G L++A+ +L KM+   +  D  ++  +I
Sbjct: 746 EKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVI 780



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 168/345 (48%), Gaps = 6/345 (1%)

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           P I  YN L     +   +     L+ ++    + P   T+N LI  LC  G LE A+++
Sbjct: 116 PPISFYNLLFRCSLKESRVDCVIWLYKDMAVAKVKPQTYTFNLLISALCEMGYLENAREV 175

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
            + M  +G  P+  +  I+V G C+ G  S   +  +EM   G  P+R AY T I+    
Sbjct: 176 FDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCG 235

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI----P 556
            G T EA +L E+M   G  PD++T+N  +  LCK G + EA+ + R M  D  +    P
Sbjct: 236 EGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKP 295

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
           + +TY  ++      G     R +F++M +   + +L +Y + +      G+L  A +  
Sbjct: 296 NTVTYNLMLEGFCSEGMFEEARAIFDSM-KNSETLSLRSYNIWMLGLVRSGKLLEAHLIL 354

Query: 617 SEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNA 676
           +EM  K I+PN+ +YN L++GLC+      A  +   M E G+ P+  TY+ L++  C  
Sbjct: 355 NEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRR 414

Query: 677 GNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYL 721
           G   EA  + +EM+     P+  T + +LL  L K+ +    E L
Sbjct: 415 GKILEANYVLREMIQVGCFPNMYTCN-ILLHSLWKEGRASEAEDL 458



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 139/305 (45%), Gaps = 35/305 (11%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P  +TY T++   CK G + EA + L EM G+  SP+ + ++  I  + + G+L  A  +
Sbjct: 527 PDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRV 586

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +++M K G   S  +YN +I G   +  + E   L +EM  RG+ P + TYN +I  L +
Sbjct: 587 LKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSE 646

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA------------------ 402
            G++ DA     EML+K + P+I ++  L+  + ++ + G A                  
Sbjct: 647 GGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLY 706

Query: 403 -FL---------------LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMIN 446
            F+               LF+    R+L      Y  LI+ LC+ G L+ A  +   M++
Sbjct: 707 SFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMD 766

Query: 447 QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ-IAGELKLGDTS 505
           +    D  ++  +++   K G+   A EF   M+    + D   +  + I G L   D S
Sbjct: 767 KQYSFDPASFMPVIDELGKRGSKHAADEFAERMMEMASETDFNEHENKNIRGRLNNNDES 826

Query: 506 EAYRL 510
           +  ++
Sbjct: 827 DWQKI 831



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 61/134 (45%)

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           P +  Y +L        R++     + +M V  ++P   T+N LI+ LC +  ++ A  +
Sbjct: 116 PPISFYNLLFRCSLKESRVDCVIWLYKDMAVAKVKPQTYTFNLLISALCEMGYLENAREV 175

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLD 710
           F  M E+G  PN+++  IL+   C AG     + L  EM      P+   ++ ++     
Sbjct: 176 FDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCG 235

Query: 711 KDYKVHAVEYLESL 724
           +   V A + +E +
Sbjct: 236 EGQTVEAEKLVEKM 249


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 168/524 (32%), Positives = 253/524 (48%), Gaps = 38/524 (7%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           PD      +I+VL D G    A  +   M   G +P++VTY  +L++ C+    ++A+ +
Sbjct: 141 PDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAV 200

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG--- 322
           L EM+ +GC+PN VTYNV+I G  R G ++ AR L+  +   G +    SY  ++ G   
Sbjct: 201 LDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCA 260

Query: 323 --------------------------------YSEKGLLVEALNLEEEMVTRGVAPTLAT 350
                                           +   G++  A+ + E+M   G A     
Sbjct: 261 SKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTL 320

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
            NI+I  +CK GRV DA     +M      PD ISY T+L G CR+    +A  L +E+ 
Sbjct: 321 CNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMV 380

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
             N  P  VT+NT I  LC+ G +E A  L E M   G    V+TY  +VNG C  G++ 
Sbjct: 381 RNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHID 440

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            A E F  M  K   P+   YTT + G         A  L  EML    PP+++T+NVLV
Sbjct: 441 SALELFRSMPCK---PNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLV 497

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
              C+ G LEEA EL+ +M+  G  P+ ITY +++    +        +L + ++ KG+S
Sbjct: 498 SFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVS 557

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           P ++T++ +I   +   R+E A   F  +Q  G+RP  + YN ++ GLC+   ID A   
Sbjct: 558 PDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDF 617

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           F  M   G +PN+ TY ILI    + G  +EA  L   +  R +
Sbjct: 618 FAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGV 661



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 150/504 (29%), Positives = 244/504 (48%), Gaps = 6/504 (1%)

Query: 202 NGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQE 261
           +G  PDV  C ++I+ L   G +  A  V R     G    +  YNT++  +C+ G +  
Sbjct: 70  DGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDA 129

Query: 262 ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC 321
           A  L+  M     +P+  TY  LI      G +  A  L+ DML+ G + +  +Y  ++ 
Sbjct: 130 ARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLE 186

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
                    +A+ + +EM  +G  P + TYN++I G+C+ GRV DAR     +      P
Sbjct: 187 AMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQP 246

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           D +SY TLL G C S    +   LF E+  +N +P  VT++ LI   CR G +E A Q+ 
Sbjct: 247 DTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVL 306

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
           E M   G   +     I++N  CK G +  A +  N+M   G  PD  +YTT + G  + 
Sbjct: 307 EQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRA 366

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
               +A  L  EM+    PP+ +T+N  +  LC+ G +E+A  L+ +M   G     +TY
Sbjct: 367 ERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTY 426

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
            ++++     G +    +LF +M  K   P  +TYT L+       RL+ A    +EM  
Sbjct: 427 NALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDGAAELVAEMLR 483

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
               PNV+T+N L++  C+   +++A  L   M E G  PN  TY  L++      + ++
Sbjct: 484 GDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSED 543

Query: 682 ALRLYKEMLDREIEPDYCTHSALL 705
           AL L   ++ + + PD  T S+++
Sbjct: 544 ALELLHGLVSKGVSPDVITFSSII 567



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 146/495 (29%), Positives = 242/495 (48%), Gaps = 6/495 (1%)

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
           R++G   + P   TY  ++   C  G + +AL LL +M  RGC PN VTY VL+    RN
Sbjct: 132 RLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRN 191

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
              EQA  ++ +M   G   +  +YN II G   +G + +A  L   + + G  P   +Y
Sbjct: 192 SGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSY 251

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
             L+ GLC   R  D    F EM+ KN +P+ ++++ L+  +CR G +  A  + +++  
Sbjct: 252 TTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTE 311

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
                     N +I+ +C+ G ++ A +L  +M + G  PD I+YT ++ G C+      
Sbjct: 312 HGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDD 371

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A+E  NEM+R    P+   + T I    + G   +A  L E+M   G    ++TYN LV+
Sbjct: 372 AKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVN 431

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           G C  G ++ A EL R M      P+ ITYT+++        L    +L   MLR    P
Sbjct: 432 GFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPP 488

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
            +VT+ VL+     +G LE A     +M   G  PN+ITYN L++G+ +    + A  L 
Sbjct: 489 NVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELL 548

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL---KQ 708
             +  +G+ P+  T++ +I         +EA++L+  + D  + P    ++ +LL   K+
Sbjct: 549 HGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKR 608

Query: 709 LDKDYKVHAVEYLES 723
            + D  +    Y+ S
Sbjct: 609 CEIDNAIDFFAYMVS 623



 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 141/452 (31%), Positives = 215/452 (47%), Gaps = 6/452 (1%)

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA 332
           G +P+      LI    R G    A  ++R     G  V   +YN ++ GY   G L  A
Sbjct: 71  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 130

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
             L   M    VAP   TY  LI  LC  GRV+DA     +MLR+   P++++Y  LL  
Sbjct: 131 RRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 187

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
            CR+    +A  + DE+R++   P +VTYN +I+G+CR G ++ A++L   + + G  PD
Sbjct: 188 MCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPD 247

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
            ++YT ++ G C         E F EM+ K   P+   +   I    + G    A ++ E
Sbjct: 248 TVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLE 307

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           +M   G   +    N++++ +CK G +++A +LL  M   G  PD I+YT+++       
Sbjct: 308 QMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAE 367

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
                ++L N M+R    P  VT+   I     +G +E A M   +M   G    V+TYN
Sbjct: 368 RWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYN 427

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
           AL+NG C    ID A  LF  M  +   PN  TYT L+   CNA     A  L  EML  
Sbjct: 428 ALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDGAAELVAEMLRG 484

Query: 693 EIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           +  P+  T + L+     K +   A+E +E +
Sbjct: 485 DCPPNVVTFNVLVSFFCQKGFLEEAIELVEQM 516



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 167/345 (48%), Gaps = 3/345 (0%)

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           PD+     L+   CR G   +A  +            V  YNTL+ G CRYG L+ A++L
Sbjct: 74  PDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRL 133

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
             +M    + PD  TYT ++   C  G ++ A    ++MLR+G QP+   YT  +    +
Sbjct: 134 IGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCR 190

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
                +A  + +EM AKG  P+++TYNV+++G+C+ G +++A ELL ++   GF PD ++
Sbjct: 191 NSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVS 250

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           YT+++             +LF  M+ K   P  VT+ +LI      G +E A     +M 
Sbjct: 251 YTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMT 310

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
             G   N    N +IN +C+  R+D A+ L  DM   G  P+  +YT ++   C A  W 
Sbjct: 311 EHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWD 370

Query: 681 EALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
           +A  L  EM+     P+  T +  +     K     A+  +E ++
Sbjct: 371 DAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMS 415


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 161/501 (32%), Positives = 265/501 (52%), Gaps = 2/501 (0%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           ML+ G   +V N N ++K L  N    KA  + R M +  + P +V+YNT++  FC+  E
Sbjct: 133 MLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKE 192

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           +++AL+L  EMQG GCS + VT+ +LI  F + G++++A GL+++M   GL+     Y  
Sbjct: 193 LEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTS 252

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           +I G+ + G L     L +E++ RG +P   TYN LI G CK GR+ +A   F  M+ + 
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERG 312

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
           V P++ +Y  L+ G C  G   EA  L + +  ++  P VVTYN +I+ LC+   +  A 
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADAL 372

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG--LQPDRFAYTTQIA 496
           ++ E M  +   PD ITY  ++ G C  G+L  A +    ML+      PD  ++   I 
Sbjct: 373 EIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIH 432

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
           G  K     +A  + + ++ K    D++T N+L++   K G + +A EL +++     +P
Sbjct: 433 GLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVP 492

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
           +  TYT++I    + G L   + L   M    L P++  Y  L+ +   +G L+ A+  F
Sbjct: 493 NSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLF 552

Query: 617 SEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNA 676
            EMQ     P+VI++N +I+G  +   I  A  L + M   G+ P+ +TY+ LIN     
Sbjct: 553 EEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKL 612

Query: 677 GNWQEALRLYKEMLDREIEPD 697
           G   EA+  + +M+D   EPD
Sbjct: 613 GYLDEAISFFDKMIDSGFEPD 633



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 157/509 (30%), Positives = 262/509 (51%), Gaps = 5/509 (0%)

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
           +R  GF   A  V  +M + G   ++  YN +L   C+  E  +A+ LL EM+     P+
Sbjct: 120 MRKTGF---AHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPD 176

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
            V+YN +I GF    ELE+A  L  +M   G   S  ++  +I  + + G + EA+ L +
Sbjct: 177 VVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLK 236

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
           EM  +G+   L  Y  LI G C  G +   +  F E+L +   P  I+YNTL+ G+C+ G
Sbjct: 237 EMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLG 296

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
            + EA  +F+ +  R + P V TY  LIDGLC  G  + A QL   M+ +   P+V+TY 
Sbjct: 297 RLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYN 356

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
           I++N  CK   ++ A E    M ++  +PD   Y + + G    GD  EA +L   ML  
Sbjct: 357 IIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKD 416

Query: 518 G--FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLR 575
                PD+I++N L+HGLCK   L +A ++   +V      D +T   +++++L+ GD+ 
Sbjct: 417 SSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVN 476

Query: 576 RGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALI 635
           +  +L+  +    + P   TYT +I      G L +A     +M++  + P+V  YN L+
Sbjct: 477 KAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLL 536

Query: 636 NGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIE 695
           + LC+   +DQA+ LF +M+ +   P+  ++ I+I+ +  AG+ + A  L   M    + 
Sbjct: 537 SSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLS 596

Query: 696 PDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           PD  T+S L+ + L   Y   A+ + + +
Sbjct: 597 PDLFTYSKLINRFLKLGYLDEAISFFDKM 625



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 153/544 (28%), Positives = 274/544 (50%), Gaps = 4/544 (0%)

Query: 156 HGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRII 215
           HG+L +++  G +   ++   ++LL    +     + + +  +M +N L+PDV + N +I
Sbjct: 127 HGVLALMLKRGFA--FNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVI 184

Query: 216 KVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCS 275
           +   +     KA ++   M   G   S+VT+  ++D+FCK G+M EA+ LL EM+ +G  
Sbjct: 185 RGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLE 244

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
            + + Y  LI GF   GEL++ + L  ++L+ G    A +YN +I G+ + G L EA  +
Sbjct: 245 ADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEI 304

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
            E M+ RGV P + TY  LI GLC  G+  +A      ML+K+  P++++YN ++   C+
Sbjct: 305 FEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCK 364

Query: 396 SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL--PDV 453
              + +A  + + ++ R   P  +TYN+L+ GLC  GDL+ A +L   M+       PDV
Sbjct: 365 DSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDV 424

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
           I++  +++G CK   L  A + ++ ++ K    D       +   LK GD ++A  L ++
Sbjct: 425 ISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQ 484

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           +      P+  TY  ++ G CK G L  A  LL KM      P    Y  ++ +  + G 
Sbjct: 485 ISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGT 544

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
           L +   LF  M R    P ++++ ++I      G ++ A      M   G+ P++ TY+ 
Sbjct: 545 LDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSK 604

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
           LIN   +L  +D+A   F  M + G  P+ +    ++    + G   +     K+++D++
Sbjct: 605 LINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKKLVDKD 664

Query: 694 IEPD 697
           +  D
Sbjct: 665 VVLD 668



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 137/473 (28%), Positives = 222/473 (46%), Gaps = 38/473 (8%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +L+  + K   +++ + +  +M   GL  D+     +I+   D G   + + ++  + E 
Sbjct: 217 ILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLER 276

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G  P  +TYNT++  FCK G ++EA E+   M  RG  PN  TY  LI G    G+ ++A
Sbjct: 277 GDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEA 336

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L+  ML+   + +  +YN II    +  L+ +AL + E M  R   P   TYN L+ G
Sbjct: 337 LQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGG 396

Query: 358 LCKWGRVSDARHRFFEMLRKN--VIPDIISYNTLLYGYCR-------------------- 395
           LC  G + +A    + ML+ +    PD+IS+N L++G C+                    
Sbjct: 397 LCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGA 456

Query: 396 ---------------SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
                          SG++ +A  L+ ++ +  +VP   TY T+IDG C+ G L VA+ L
Sbjct: 457 GDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGL 516

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
              M    + P V  Y  +++  CK G L  A   F EM R    PD  ++   I G LK
Sbjct: 517 LCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLK 576

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
            GD   A  L   M   G  PDL TY+ L++   KLG L+EA     KM+  GF PD   
Sbjct: 577 AGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHI 636

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLS-PTLVTYTVLIHAHAARGRLELA 612
             S++   +  G+  +  +    ++ K +     +T TV+ +  ++ G +++A
Sbjct: 637 CDSVLKYCISQGETDKLTEFVKKLVDKDVVLDKELTCTVMDYMCSSSGNMDIA 689


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 152/509 (29%), Positives = 265/509 (52%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K+  +++    +N+ML   + P+V   N II  L       KA EV   M + G+ P 
Sbjct: 98  FFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPD 157

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            +TYN+++  FC  G+ +EA+  L +M+  G  P+ VTYN L+    +NG   +AR +  
Sbjct: 158 CMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFD 217

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M K GLK    +Y  ++ GY+ KG LVE   L + MV  G+ P    ++IL+    K  
Sbjct: 218 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQE 277

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           +V +A   F +M ++ + P+ ++Y  ++   C+SG + +A L F+++    L P  + YN
Sbjct: 278 KVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYN 337

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           +LI GLC     E A++L   M+++GI  + I +  +++  CK G +  + + F+ M+R 
Sbjct: 338 SLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 397

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G++PD   Y+T I G    G   EA +L   M++ G  PD +TY+ L++G CK+  +++A
Sbjct: 398 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDA 457

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             L R+M   G  PD ITY  I+    +       ++L+  + + G    L TY +++H 
Sbjct: 458 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHG 517

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
                  + A   F  + +  ++    T+N +I+ L ++ R D+A  LF+     G++PN
Sbjct: 518 LCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 577

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLD 691
            +TY ++       G  +E  +L+  M D
Sbjct: 578 YWTYRLMAENIIGQGLLEELDQLFLSMED 606



 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 146/447 (32%), Positives = 235/447 (52%), Gaps = 3/447 (0%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG--CSPNGVTYNVL 284
           AR V+  +   GI P + +YN +L+  C E   QEALELL  M   G  C P+ V+Y+ +
Sbjct: 36  ARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTV 94

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           I GF + G+L++      +ML   +  +  +YN II    +   + +A+ +   MV  GV
Sbjct: 95  INGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGV 154

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
            P   TYN +++G C  G+  +A     +M    V PD+++YN+L+   C++G   EA  
Sbjct: 155 MPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARK 214

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
           +FD +  R L P + TY TL+ G    G L     L + M+  GI P+   ++I+V    
Sbjct: 215 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYA 274

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
           K   +  A   F++M ++GL P+   Y   I    K G   +A    E+M+ +G  P  I
Sbjct: 275 KQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 334

Query: 525 TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM 584
            YN L+HGLC     E A EL+ +M+  G   + I + SII +  + G +     LF+ M
Sbjct: 335 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM 394

Query: 585 LRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRI 644
           +R G+ P ++TY+ LI  +   G+++ A    + M   G++P+ +TY+ LING C++ R+
Sbjct: 395 VRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRM 454

Query: 645 DQAYGLFIDMEEEGILPNKYTYTILIN 671
             A  LF +ME  G+ P+  TY I++ 
Sbjct: 455 KDALVLFREMESSGVSPDIITYNIILQ 481



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 153/497 (30%), Positives = 259/497 (52%), Gaps = 3/497 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG--IKPSIVTYNTMLDS 252
           VF+++LR G+ PDV + N ++  L D   S +A E+  +M + G    P +V+Y+T+++ 
Sbjct: 39  VFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVING 97

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
           F KEG++ +      EM  +  SPN VTYN +I    +   +++A  ++  M+K G+   
Sbjct: 98  FFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPD 157

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
             +YN I+ G+   G   EA+   ++M + GV P + TYN L+  LCK GR ++AR  F 
Sbjct: 158 CMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFD 217

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
            M ++ + P+I +Y TLL GY   G + E   L D +    + P    ++ L+    +  
Sbjct: 218 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQE 277

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
            +E A  +   M  QG+ P+ +TY  ++   CK G +  A  +F +M+ +GL P    Y 
Sbjct: 278 KVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYN 337

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
           + I G         A  L  EML +G   + I +N ++   CK G + E+ +L   MV  
Sbjct: 338 SLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 397

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
           G  PD ITY+++I      G +     L  +M+  G+ P  VTY+ LI+ +    R++ A
Sbjct: 398 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDA 457

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
            + F EM+  G+ P++ITYN ++ GL + RR   A  L++ + + G      TY I+++ 
Sbjct: 458 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHG 517

Query: 673 NCNAGNWQEALRLYKEM 689
            C      +ALR+++ +
Sbjct: 518 LCKNKLTDDALRMFQNL 534



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 131/482 (27%), Positives = 227/482 (47%), Gaps = 35/482 (7%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           ++ ++   KM  +G+ PDV   N ++  L  NG   +AR+++  M + G+KP I TY T+
Sbjct: 175 KEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTL 234

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           L  +  +G + E   LL  M   G  PN   +++L+  +++  ++E+A  +   M + GL
Sbjct: 235 LQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGL 294

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC---KW----- 361
             +A +Y  +I    + G + +A+   E+M+  G++P    YN LI+GLC   KW     
Sbjct: 295 NPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEE 354

Query: 362 ---------------------------GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
                                      GRV ++   F  M+R  V PDII+Y+TL+ GYC
Sbjct: 355 LILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYC 414

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
            +G + EA  L   + S  + P  VTY+TLI+G C+   ++ A  L   M + G+ PD+I
Sbjct: 415 LAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDII 474

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
           TY I++ G  +    + A+E +  + + G Q +   Y   + G  K   T +A R+ + +
Sbjct: 475 TYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNL 534

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
                  +  T+N+++  L K+G  +EA +L      +G +P++ TY  +    +  G L
Sbjct: 535 CLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLL 594

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
                LF +M   G +        ++     RG +  A  Y S +  K       T +  
Sbjct: 595 EELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLF 654

Query: 635 IN 636
           I+
Sbjct: 655 ID 656



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 130/521 (24%), Positives = 236/521 (45%), Gaps = 61/521 (11%)

Query: 103 KPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETV------------ 150
           +P+ A+ F + + +  GV+ D   + ++++ L ++G    A  + +++            
Sbjct: 173 QPKEAIVFLKKMRSD-GVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTY 231

Query: 151 -----------VCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKM 199
                        V MHG+LD+++  G+    +  +  +L+  Y K+  VE+ +LVF+KM
Sbjct: 232 GTLLQGYATKGALVEMHGLLDLMVRNGIHP--NHYVFSILVCAYAKQEKVEEAMLVFSKM 289

Query: 200 LRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEM 259
            + GL                                    P+ VTY  ++   CK G +
Sbjct: 290 RQQGL-----------------------------------NPNAVTYGAVIGILCKSGRV 314

Query: 260 QEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI 319
           ++A+    +M   G SP  + YN LI G     + E+A  LI +ML  G+ ++   +N I
Sbjct: 315 EDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSI 374

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           I  + ++G ++E+  L + MV  GV P + TY+ LI G C  G++ +A      M+   +
Sbjct: 375 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGM 434

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
            PD ++Y+TL+ GYC+   + +A +LF E+ S  + P ++TYN ++ GL +      A++
Sbjct: 435 KPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKE 494

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           L   +   G   ++ TY I+++G CK      A   F  +    L+ +   +   I   L
Sbjct: 495 LYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALL 554

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           K+G   EA  L     + G  P+  TY ++   +   G LEE ++L   M  +G   D  
Sbjct: 555 KVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSG 614

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
               I+   L+ G++ R     + +  K  S    T ++ I
Sbjct: 615 MLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFI 655



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 68/131 (51%), Gaps = 3/131 (2%)

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG--IRPNVITYNAL 634
            R +F+ +LR+G+ P + +Y +L++      R + A      M   G    P+V++Y+ +
Sbjct: 36  ARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTV 94

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           ING  +   +D+ Y  + +M ++ I PN  TY  +I   C A    +A+ +   M+   +
Sbjct: 95  INGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGV 154

Query: 695 EPDYCTHSALL 705
            PD  T+++++
Sbjct: 155 MPDCMTYNSIV 165



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/249 (20%), Positives = 99/249 (39%), Gaps = 10/249 (4%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE-----VYRMMGEF 237
           Y     +++   +   M+  G+ PD    + +I     NG+   +R      ++R M   
Sbjct: 413 YCLAGKMDEATKLLASMVSVGMKPDCVTYSTLI-----NGYCKISRMKDALVLFREMESS 467

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G+ P I+TYN +L    +      A EL   +   G      TYN+++ G  +N   + A
Sbjct: 468 GVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDA 527

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             + +++  + LK+ A ++N +I    + G   EA +L     + G+ P   TY ++   
Sbjct: 528 LRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAEN 587

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           +   G + +    F  M       D    N ++    + G I  A      +  ++    
Sbjct: 588 IIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLE 647

Query: 418 VVTYNTLID 426
             T +  ID
Sbjct: 648 ASTASLFID 656


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 146/516 (28%), Positives = 274/516 (53%), Gaps = 8/516 (1%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE----FGIKPSIV 244
           ++  + +F  M+++  LP +   N+++  +      +K  ++   +GE     GI  ++ 
Sbjct: 66  LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIA----KMKKFDLVISLGEKMQRLGISHNLY 121

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TYN +++ FC+  ++  AL LL +M   G  P+ VT + L+ G+     +  A  L+  M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           +++G +    ++  +I G        EA+ L + MV RG  P L TY +++ GLCK G +
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
             A +   +M    +  +++ Y+T++   C+  +  +A  LF E+ ++ + P V+TY++L
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           I  LC Y     A +L  +MI + I P+V+T+  +++   K G L  A + ++EM+++ +
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            PD F Y++ I G        EA  + E M++K   P+++TYN L++G CK   ++E  E
Sbjct: 362 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVE 421

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           L R+M   G + + +TYT++IH   +  D    + +F  M+  G+ P ++TY  L+    
Sbjct: 422 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 481

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
             G+LE A + F  +Q   + P + TYN +I G+C+  +++  + LF  +  +G+ P+  
Sbjct: 482 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 541

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
            Y  +I+  C  G  +EA  L+++M +    PD  T
Sbjct: 542 IYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577



 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 139/465 (29%), Positives = 248/465 (53%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PSI  +N +L +  K  +    + L  +MQ  G S N  TYN+LI  F R  ++  A  L
Sbjct: 83  PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  M+KLG + S  + + ++ GY     + +A+ L ++MV  G  P   T+  LI+GL  
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
             + S+A      M+++   P++++Y  ++ G C+ G+I  AF L +++ +  +   VV 
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y+T+ID LC+Y   + A  L   M N+G+ P+VITY+ +++  C     S A    ++M+
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            + + P+   +   I   +K G   EA +L +EM+ +   PD+ TY+ L++G C    L+
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA  +   M+     P+ +TY ++I+   +   +  G +LF  M ++GL    VTYT LI
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
           H        + A M F +M   G+ PN++TYN L++GLC+  ++++A  +F  ++   + 
Sbjct: 443 HGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 502

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           P  YTY I+I   C AG  ++   L+  +  + ++PD   ++ ++
Sbjct: 503 PTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMI 547



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 133/435 (30%), Positives = 224/435 (51%)

Query: 271 GRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLV 330
           GR  S     Y  ++     + +L+ A GL   M+K     S   +N ++   ++     
Sbjct: 43  GRAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFD 102

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
             ++L E+M   G++  L TYNILI   C+  ++S A     +M++    P I++ ++LL
Sbjct: 103 LVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
            GYC    I +A  L D++      P  +T+ TLI GL  +     A  L + M+ +G  
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
           P+++TY ++VNG CK G++ +A    N+M    ++ +   Y+T I    K     +A  L
Sbjct: 223 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNL 282

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
             EM  KG  P++ITY+ L+  LC      +A+ LL  M+     P+ +T+ ++I A ++
Sbjct: 283 FTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVK 342

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
            G L     L++ M+++ + P + TY+ LI+      RL+ A   F  M  K   PNV+T
Sbjct: 343 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 402

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           YN LING C+ +RID+   LF +M + G++ N  TYT LI+    A +   A  ++K+M+
Sbjct: 403 YNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 462

Query: 691 DREIEPDYCTHSALL 705
              + P+  T++ LL
Sbjct: 463 SDGVHPNIMTYNTLL 477



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 116/416 (27%), Positives = 186/416 (44%), Gaps = 56/416 (13%)

Query: 346 PTLATYNILIYGLCKWGR---------------------VSDARHRFFEMLRKNVIPDII 384
           P +A  +I + G+C WGR                     + DA   F  M++   +P I 
Sbjct: 27  PRIAPSSIDLCGMCYWGRAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIF 86

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
            +N LL    +         L ++++   +   + TYN LI+  CR   + +A  L   M
Sbjct: 87  EFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKM 146

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
           +  G  P ++T + ++NG C    +S A    ++M+  G +PD   +TT I G       
Sbjct: 147 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 206

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG------------- 551
           SEA  L + M+ +G  P+L+TY V+V+GLCK G ++ A  LL KM               
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTV 266

Query: 552 ----------------------DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
                                  G  P+ ITY+S+I              L ++M+ + +
Sbjct: 267 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKI 326

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
           +P +VT+  LI A    G+L  A   + EM  + I P++ TY++LING C   R+D+A  
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 386

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +F  M  +   PN  TY  LIN  C A    E + L++EM  R +  +  T++ L+
Sbjct: 387 MFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 174/595 (29%), Positives = 292/595 (49%), Gaps = 16/595 (2%)

Query: 100 IREKPRIALRFF-RWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGI 158
           I + P +AL  F R    + G +     FCT   ++      R     +    C+   G+
Sbjct: 129 ITDGPALALALFNRVCREEAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGL 188

Query: 159 -LDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
            +D +    L  C          L Y  ++  E   ++ ++M   G +P+  + + ++K 
Sbjct: 189 KMDQITANTLLKC----------LCYANRTE-EAVNVLLHRMSELGCVPNAVSYSIVLKA 237

Query: 218 LRDNGFSVKAREVYRMMGEFG--IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCS 275
           L DN  S +A ++ +MM + G    P +V Y+T++  F  EGE  +A  L  EM  +G  
Sbjct: 238 LCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVK 297

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           P+ VTYN++I    +   +++A  ++R M   G +    +Y+ +I GY+  G L EA  +
Sbjct: 298 PDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKM 357

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
             EM  RG+ P + T N  +  LCK GR  +A   F  M  K   PDI SY TLL+GY  
Sbjct: 358 FREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYAS 417

Query: 396 SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
            G   +   LF+ ++S  +      +  LI    + G ++ A  +   M  QG+ PDV+T
Sbjct: 418 EGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVT 477

Query: 456 YTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML 515
           Y+ +++   +MG L+ A E FN+M+ +G+QP+   Y++ I G    G   +A  L  EM+
Sbjct: 478 YSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMI 537

Query: 516 AKGFP-PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
            KG P PD++ ++ +++ LCK G + +A+++       G  P  IT+ S+I     +G +
Sbjct: 538 NKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKM 597

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
            +   + + M   G+ P +VTY  L+  +   GR+      F EMQ KG++PN +TY  +
Sbjct: 598 DKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIM 657

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           + GL R  R   A   F +M E G       Y I++   C      EA+ L++++
Sbjct: 658 LAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKL 712



 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 148/531 (27%), Positives = 263/531 (49%), Gaps = 1/531 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F++M R G+ PDV   N II  L       KA  V R M   G +P  VTY+ M+  + 
Sbjct: 287 LFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYA 346

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
             G ++EA ++  EM+ RG  PN VT N  +    ++G  ++A      M   G K    
Sbjct: 347 TLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIF 406

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           SY  ++ GY+ +G   + + L   M + G+A     + ILI+   K G V DA   F EM
Sbjct: 407 SYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEM 466

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
            ++ V PD+++Y+T++  + R G + +A   F+++ +R + P    Y+++I G C +G L
Sbjct: 467 QQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGL 526

Query: 435 EVAQQLKENMINQGI-LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
             A++L   MIN+GI  PD++ ++ ++N  CK G +  A + F+     G +P    + +
Sbjct: 527 VKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNS 586

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            I G   +G   +A+++ + M   G  PD++TYN L+ G  K G + +   L R+M   G
Sbjct: 587 LIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKG 646

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
             P+ +TY  ++      G     R  F+ M+  G + T+  Y +++         + A 
Sbjct: 647 VKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAI 706

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
           + F ++    ++ ++   N +IN + +++R ++A  LF  +   G+LPN+ TY ++I   
Sbjct: 707 ILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINL 766

Query: 674 CNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
              G  ++A  ++  M    I P     + ++   L+K     A  YL  +
Sbjct: 767 LKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKV 817



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 144/546 (26%), Positives = 262/546 (47%), Gaps = 38/546 (6%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           +L++    K   +++  LV  +M  +G  PD    + +I      G   +A +++R M +
Sbjct: 304 NLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKK 363

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G+ P+IVT N+ L S CK G  +EA E    M  +G  P+  +Y  L+ G++  G    
Sbjct: 364 RGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFAD 423

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
             GL   M   G+  + H +  +I  Y+++G++ +A+ +  EM  +GV+P + TY+ +I 
Sbjct: 424 MIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVIS 483

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV- 415
              + GR++DA  +F +M+ + + P+   Y++++ G+C  G + +A  L  E+ ++ +  
Sbjct: 484 TFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPR 543

Query: 416 -----------------------------------PTVVTYNTLIDGLCRYGDLEVAQQL 440
                                              P V+T+N+LIDG C  G ++ A ++
Sbjct: 544 PDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKI 603

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
            + M   G+ PD++TY  +++G  K G ++     F EM RKG++P+   Y   +AG  +
Sbjct: 604 LDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFR 663

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
            G T  A +   EM+  G    +  Y +++ GLC+    +EA  L +K+ G   +   IT
Sbjct: 664 AGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKL-GTMNVKFSIT 722

Query: 561 -YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
              ++I+A  ++      ++LF  +   GL P   TY V+I      G +E A   FS M
Sbjct: 723 ILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSM 782

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
           +  GI P     N +I  L     I +A      ++ + IL    T +++++     G +
Sbjct: 783 EKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKY 842

Query: 680 QEALRL 685
           QE ++L
Sbjct: 843 QEDIKL 848



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 131/450 (29%), Positives = 222/450 (49%), Gaps = 11/450 (2%)

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN- 334
           P   TYN+L+    R    +    L   +L+ GLK+   + N ++          EA+N 
Sbjct: 155 PTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNV 214

Query: 335 LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN---VIPDIISYNTLLY 391
           L   M   G  P   +Y+I++  LC    +S       +M+ K      PD+++Y+T+++
Sbjct: 215 LLHRMSELGCVPNAVSYSIVLKALCD-NSMSQRALDLLQMMAKQGGACSPDVVAYSTVIH 273

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
           G+   G  G+A  LF E+  + + P VVTYN +ID LC+   ++ A+ +   M   G  P
Sbjct: 274 GFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQP 333

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           D +TY+ M++G   +G L  A + F EM ++GL P+     + +A   K G + EA    
Sbjct: 334 DTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFF 393

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
           + M AKG  PD+ +Y  L+HG    G   +   L   M  +G   +   +T +IHA  + 
Sbjct: 394 DSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKR 453

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
           G +     +F  M ++G+SP +VTY+ +I   +  GRL  A   F++M  +GI+PN   Y
Sbjct: 454 GMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVY 513

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGI-LPNKYTYTILINENCNAGNWQEALRLYKEML 690
           +++I G C    + +A  L  +M  +GI  P+   ++ +IN  C  G   +A  ++    
Sbjct: 514 SSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLAT 573

Query: 691 DREIEPDYCTHSAL-----LLKQLDKDYKV 715
           D    P   T ++L     L+ ++DK +K+
Sbjct: 574 DIGERPGVITFNSLIDGYCLVGKMDKAFKI 603



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 140/521 (26%), Positives = 241/521 (46%), Gaps = 47/521 (9%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y     +++   +F +M + GL+P++  CN  +  L  +G S +A E +  M   G KP 
Sbjct: 345 YATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPD 404

Query: 243 IVTYNTMLD-----------------------------------SFCKEGEMQEALELLW 267
           I +Y T+L                                    ++ K G + +A+ +  
Sbjct: 405 IFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFT 464

Query: 268 EMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKG 327
           EMQ +G SP+ VTY+ +I+ FSR G L  A      M+  G++ +   Y+ II G+   G
Sbjct: 465 EMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHG 524

Query: 328 LLVEALNLEEEMVTRGVA-PTLATYNILIYGLCKWGRVSDARHRFFEMLRK-NVIPDIIS 385
            LV+A  L  EM+ +G+  P +  ++ +I  LCK GRV DA H  F++       P +I+
Sbjct: 525 GLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDA-HDIFDLATDIGERPGVIT 583

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           +N+L+ GYC  G + +AF + D +    + P +VTYNTL+DG  + G +     L   M 
Sbjct: 584 FNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQ 643

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
            +G+ P+ +TY IM+ G  + G    AR+ F+EM+  G       Y   + G  +     
Sbjct: 644 RKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCAD 703

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           EA  L +++        +   N +++ + K+   EEA EL   +   G +P+  TY  +I
Sbjct: 704 EAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMI 763

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
              L+ G +    ++F++M + G+ P       +I     +G +  A  Y S++  K I 
Sbjct: 764 INLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRIL 823

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
               T + +++   R  +           E+  +LP KY +
Sbjct: 824 LEASTTSLMLSLFSRKGKYQ---------EDIKLLPAKYQF 855



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 129/418 (30%), Positives = 191/418 (45%), Gaps = 40/418 (9%)

Query: 337 EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS 396
           EE  T+   PT  TYNIL+   C+  R       F  +LR  +  D I+ NTLL   C +
Sbjct: 146 EEAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYA 205

Query: 397 GNIGEAF-------------------------LLFDELRSRNL-------------VPTV 418
               EA                          L  + +  R L              P V
Sbjct: 206 NRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDV 265

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           V Y+T+I G    G+   A  L   M  QG+ PDV+TY ++++  CK   +  A     +
Sbjct: 266 VAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQ 325

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M   G QPD   Y+  I G   LG   EA ++  EM  +G  P+++T N  +  LCK G 
Sbjct: 326 MTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGR 385

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
            +EA E    M   G  PD  +Y +++H     G       LFN+M   G++     +T+
Sbjct: 386 SKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTI 445

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           LIHA+A RG ++ A + F+EMQ +G+ P+V+TY+ +I+   R+ R+  A   F  M   G
Sbjct: 446 LIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARG 505

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI-EPDYCTHSALLLKQLDKDYKV 715
           I PN   Y+ +I   C  G   +A  L  EM+++ I  PD    S+ ++  L KD +V
Sbjct: 506 IQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSS-VINSLCKDGRV 562



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 129/266 (48%), Gaps = 6/266 (2%)

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
           +E    Q  +P   TY I+++  C+     +    F  +LR GL+ D+    T +     
Sbjct: 145 REEAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCY 204

Query: 501 LGDTSEAYR-LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV--GDGFIPD 557
              T EA   L   M   G  P+ ++Y++++  LC     + A +LL+ M   G    PD
Sbjct: 205 ANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPD 264

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
            + Y+++IH     G+  +   LF+ M R+G+ P +VTY ++I A      ++ A +   
Sbjct: 265 VVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLR 324

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
           +M   G +P+ +TY+ +I+G   L R+ +A  +F +M++ G++PN  T    +   C  G
Sbjct: 325 QMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHG 384

Query: 678 NWQEALRLYKEMLDREIEPD---YCT 700
             +EA   +  M  +  +PD   YCT
Sbjct: 385 RSKEAAEFFDSMTAKGHKPDIFSYCT 410



 Score = 46.6 bits (109), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 66/308 (21%), Positives = 126/308 (40%), Gaps = 72/308 (23%)

Query: 81  DHFQAVVSDPELLV--RVLNRIREKPRI--ALRFFRWVETQPGVKRDEFVFCTILEILIE 136
           D  + V  +P+++    +L+   +  RI   L  FR ++ + GVK +   +  +L  L  
Sbjct: 605 DAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQ-RKGVKPNTVTYGIMLAGLFR 663

Query: 137 SGLLRSA----YWVVE--TVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVE 190
           +G   +A    + ++E  T V V+++GI    I GGL                 + +  +
Sbjct: 664 AGRTVAARKKFHEMIESGTTVTVSIYGI----ILGGL----------------CRNNCAD 703

Query: 191 QCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTML 250
           + +++F K                                   +G   +K SI   NTM+
Sbjct: 704 EAIILFQK-----------------------------------LGTMNVKFSITILNTMI 728

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
           ++  K    +EA EL   +   G  PN  TY V+I    ++G +E A  +   M K G+ 
Sbjct: 729 NAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIV 788

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD---- 366
             +   N II    EKG + +A N   ++  + +    +T ++++    + G+  +    
Sbjct: 789 PGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYQEDIKL 848

Query: 367 --ARHRFF 372
             A+++FF
Sbjct: 849 LPAKYQFF 856


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 161/513 (31%), Positives = 258/513 (50%), Gaps = 1/513 (0%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   V+  LL FN+MLR    P +   ++++  +   G    A  ++  +   GI PSI 
Sbjct: 32  KFHTVDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIA 91

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           T   +++ +C +  +  A  LL  +   G  PN VT+N LI GF  NG + +A     D+
Sbjct: 92  TLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDL 151

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           +  G  +   SY  +I G  + G   +AL L ++M    V P L TY+ +I GLCK   +
Sbjct: 152 MAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLI 211

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
           +DA   F  +  + ++ D+++YN+L++G C  G   EA  L   +   N+ P   T+N L
Sbjct: 212 ADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNIL 271

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           +D LC+ G +  AQ +   M+ +G  PD++TY  ++ G C   N+S ARE FN M+++GL
Sbjct: 272 VDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGL 331

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
           +PD   Y   I G  K+    EA  L +E+  K   P+L TYN L+ GLCKLG +    E
Sbjct: 332 EPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQE 391

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           L+ +M   G  PD +TY   + A  +     +   LF  ++ +G+ P    Y V++    
Sbjct: 392 LVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIV-QGIWPDFYMYDVIVENFC 450

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
              +L++A      + + G  PNV TY  +IN LC+    D+A  L   M++    P+  
Sbjct: 451 KGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAV 510

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           T+  +I          +A +L  EM++R +  D
Sbjct: 511 TFETIIGALQERNETDKAEKLRLEMIERGLVND 543



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 137/465 (29%), Positives = 239/465 (51%), Gaps = 1/465 (0%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P I  ++ +L +  + G    A+ L  ++  +G +P+  T  +LI  +     L  A  L
Sbjct: 53  PPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSL 112

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  +LK+G + +  ++N +I G+   G++ +A+    +++ +G      +Y  LI GLCK
Sbjct: 113 LGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCK 172

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G+  DA     +M    V P++I+Y+T++ G C+   I +A  LF  + SR ++  VV 
Sbjct: 173 NGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVA 232

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YN+LI G C  G    A +L   M+   I PD  T+ I+V+  CK G +  A+  F  M+
Sbjct: 233 YNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMM 292

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           ++G +PD   Y   + G     + SEA  L   M+ +G  PD++ YNVL++G CK+  ++
Sbjct: 293 KRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVD 352

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA  L +++     +P+  TY S+I    ++G +   ++L + M  +G SP +VTY + +
Sbjct: 353 EAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFL 412

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
            A       E A   F ++ V+GI P+   Y+ ++   C+  ++  A      +   G  
Sbjct: 413 DAFCKSKPYEKAISLFRQI-VQGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCC 471

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           PN  TYTI+IN  C   ++ EA+ L  +M D +  PD  T   ++
Sbjct: 472 PNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETII 516



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 109/346 (31%), Positives = 179/346 (51%)

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
           K+  V D    F  MLRK+  P I  ++ LL    R G+   A  LF +L S+ + P++ 
Sbjct: 32  KFHTVDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIA 91

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
           T   LI+  C    L  A  L   ++  G  P+++T+  ++NG C  G +S A  F  ++
Sbjct: 92  TLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDL 151

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
           + KG   D F+Y + I G  K G T +A +L ++M      P+LITY+ ++ GLCK   +
Sbjct: 152 MAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLI 211

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
            +A  L   +   G + D + Y S+IH    +G  R    L   M+R  ++P   T+ +L
Sbjct: 212 ADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNIL 271

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           + A    GR+  A   F+ M  +G +P+++TYNAL+ G C    + +A  LF  M + G+
Sbjct: 272 VDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGL 331

Query: 660 LPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            P+   Y +LIN  C      EA+ L+KE+  + + P+  T+++L+
Sbjct: 332 EPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLI 377



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 180/367 (49%)

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
           M+ +   P +  ++ L+  + + G    A   F ++  K + P I +   L+  YC   +
Sbjct: 46  MLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAH 105

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           +  AF L   +      P +VT+NTLI+G C  G +  A   + +++ +G   D  +Y  
Sbjct: 106 LSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGS 165

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           ++NG CK G    A +   +M    ++P+   Y+T I G  K    ++A RL   + ++G
Sbjct: 166 LINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRG 225

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
              D++ YN L+HG C +G   EA  LL  MV     PD  T+  ++ A  + G +   +
Sbjct: 226 ILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQ 285

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
            +F  M+++G  P +VTY  L+        +  A   F+ M  +G+ P+V+ YN LING 
Sbjct: 286 GVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGY 345

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
           C++  +D+A  LF ++  + ++PN  TY  LI+  C  G       L  EM DR   PD 
Sbjct: 346 CKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDI 405

Query: 699 CTHSALL 705
            T++  L
Sbjct: 406 VTYNIFL 412



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 115/427 (26%), Positives = 182/427 (42%), Gaps = 56/427 (13%)

Query: 111 FRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVV----ETVVCVNMHGILDVLIGGG 166
           FR      G   DEF + +++  L ++G  R A  ++    E +V  N+     V+ G  
Sbjct: 147 FRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDG-- 204

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
                             K  ++   L +F+ +   G+L DV   N +I      G   +
Sbjct: 205 ----------------LCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWRE 248

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A  +  MM    I P   T+N ++D+ CKEG + EA  +   M  RG  P+ VTYN L+ 
Sbjct: 249 ATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALME 308

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           GF  +  + +AR L   M+K GL+    +YN +I GY +  ++ EA+ L +E+  + + P
Sbjct: 309 GFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVP 368

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
            LATYN LI GLCK GR+S  +    EM  +   PDI++YN  L  +C+S    +A  LF
Sbjct: 369 NLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLF 428

Query: 407 DELRS----------------------------------RNLVPTVVTYNTLIDGLCRYG 432
            ++                                        P V TY  +I+ LC+  
Sbjct: 429 RQIVQGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDC 488

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
             + A  L   M +    PD +T+  ++    +      A +   EM+ +GL  D     
Sbjct: 489 SFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLVNDEARLV 548

Query: 493 TQIAGEL 499
            +  G L
Sbjct: 549 HEQXGNL 555


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 162/567 (28%), Positives = 286/567 (50%), Gaps = 3/567 (0%)

Query: 155 MHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRI 214
           +H + D   GG     VS    + +L  + K+   ++    +++ML  G+LPDV   + I
Sbjct: 186 LHMMADDRGGGSPPDVVS---YNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSI 242

Query: 215 IKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGC 274
           I  L       KA EV   M + G+ P  +TYN++L  +C  G+ +EA+  L +M+  G 
Sbjct: 243 IAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGV 302

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
            PN VTY+ L+    +NG   +AR +   M K GL+    +Y  ++ GY+ KG LVE   
Sbjct: 303 EPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHA 362

Query: 335 LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
           L + MV  G+ P    +NILI    K  +V  A   F +M +  + P+++ Y T++   C
Sbjct: 363 LLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLC 422

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
           +SG++ +A L F+++    L P ++ Y +LI GLC     + A++L   M+++GI  + I
Sbjct: 423 KSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTI 482

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
            +  +++  CK G +  + + F+ M+R G++PD   Y T I G    G   EA +L   M
Sbjct: 483 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASM 542

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
           ++ G  PD++TY  L++G C++  +++A  L ++MV  G  P+ ITY  I+         
Sbjct: 543 VSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRT 602

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
              ++L+ ++ + G    L TY +++H        + A   F  + +  ++    T+N +
Sbjct: 603 AAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 662

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           I  L +  R+D+A  LF      G++P+  TY+++       G+ +E   L+  M +   
Sbjct: 663 IGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGC 722

Query: 695 EPDYCTHSALLLKQLDKDYKVHAVEYL 721
             D    ++++ K L +     A  YL
Sbjct: 723 SADSRMLNSIVRKLLQRGDITRAGTYL 749



 Score =  263 bits (672), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 153/500 (30%), Positives = 251/500 (50%), Gaps = 3/500 (0%)

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM---QGRGCSPNGVTYNVLIT 286
           V R M E G  P + +YN +L   C E   QEALELL  M   +G G  P+ V+YN ++ 
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           GF + G+ ++A     +ML  G+     +Y+ II    +   + +A+ +   MV  GV P
Sbjct: 210 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMP 269

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
              TYN +++G C  G+  +A     +M    V P++++Y++L+   C++G   EA  +F
Sbjct: 270 DCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIF 329

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
           D +  R L P + TY TL+ G    G L     L + M+  GI PD   + I++    K 
Sbjct: 330 DSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQ 389

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
             +  A   F++M + GL P+   Y T I    K G   +A    E+M+ +G  P++I Y
Sbjct: 390 EKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVY 449

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
             L+HGLC     ++A EL+ +M+  G   + I + SII +  + G +     LF+ M+R
Sbjct: 450 TSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVR 509

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
            G+ P ++TY  LI      G+++ A    + M   G++P+++TY  LING CR+ R+D 
Sbjct: 510 IGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDD 569

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
           A  LF +M   G+ PN  TY I++    +      A  LY  +     + +  T++ +L 
Sbjct: 570 ALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILH 629

Query: 707 KQLDKDYKVHAVEYLESLTL 726
                +    A+   ++L L
Sbjct: 630 GLCKNNLTDEALRMFQNLCL 649



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 151/552 (27%), Positives = 263/552 (47%), Gaps = 41/552 (7%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM--GEFGIKPSIVTYNTMLDS 252
           VF+++LR G    +   NR +  +  +  +       RM   G   + P++ TY  ++  
Sbjct: 42  VFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIGC 101

Query: 253 FCKEGEM-----------------------------------QEALEL-LWEMQGRGCSP 276
            C+ G +                                    +A+++ L  M   GC P
Sbjct: 102 CCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIP 161

Query: 277 NGVTYNVLITGFSRNGELEQARGLIRDMLKL---GLKVSAHSYNPIICGYSEKGLLVEAL 333
           +  +YN L+ G       ++A  L+  M      G      SYN ++ G+ ++G   +A 
Sbjct: 162 DVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAY 221

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
           +   EM+ RG+ P + TY+ +I  LCK   +  A      M++  V+PD ++YN++L+GY
Sbjct: 222 STYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGY 281

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
           C SG   EA     ++RS  + P VVTY++L++ LC+ G    A+++ ++M  +G+ PD+
Sbjct: 282 CSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDI 341

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
            TY  ++ G    G L       + M+R G+QPD   +   I    K     +A  +  +
Sbjct: 342 ATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSK 401

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           M   G  P+++ Y  ++  LCK GS+++A     +M+ +G  P+ I YTS+IH       
Sbjct: 402 MRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDK 461

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
             +  +L   ML +G+    + +  +I +H   GR+  +   F  M   G++P++ITYN 
Sbjct: 462 WDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNT 521

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
           LI+G C   ++D+A  L   M   G+ P+  TY  LIN  C      +AL L+KEM+   
Sbjct: 522 LIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSG 581

Query: 694 IEPDYCTHSALL 705
           + P+  T++ +L
Sbjct: 582 VSPNIITYNIIL 593



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 139/508 (27%), Positives = 250/508 (49%), Gaps = 36/508 (7%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   +++ + V N M++NG++PD    N I+     +G   +A    + M   G++P++V
Sbjct: 248 KAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVV 307

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY+++++  CK G   EA ++   M  RG  P+  TY  L+ G++  G L +   L+  M
Sbjct: 308 TYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLM 367

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           ++ G++   H +N +IC Y+++  + +A+ +  +M   G+ P +  Y  +I  LCK G V
Sbjct: 368 VRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSV 427

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYG-------------------------------- 392
            DA   F +M+ + + P+II Y +L++G                                
Sbjct: 428 DDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSI 487

Query: 393 ---YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
              +C+ G + E+  LFD +    + P ++TYNTLIDG C  G ++ A +L  +M++ G+
Sbjct: 488 IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGV 547

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
            PD++TY  ++NG C++  +  A   F EM+  G+ P+   Y   + G      T+ A  
Sbjct: 548 KPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKE 607

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           L   +   G   +L TYN+++HGLCK    +EA  + + +       +  T+  +I A L
Sbjct: 608 LYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 667

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
           + G +   +DLF      GL P + TY+++      +G LE     F  M+  G   +  
Sbjct: 668 KCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSR 727

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEE 657
             N+++  L +   I +A G ++ M +E
Sbjct: 728 MLNSIVRKLLQRGDITRA-GTYLFMIDE 754



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 136/442 (30%), Positives = 204/442 (46%), Gaps = 43/442 (9%)

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG---VAPTLATY 351
           E AR +  ++L+ G   S +  N  +   +       A++    M   G   V PT+ TY
Sbjct: 37  EDARHVFDELLRRGRGASIYGLNRALADVARHSP-AAAVSRYNRMARAGAGKVTPTVHTY 95

Query: 352 NILI-----------------------------------YGLCKWGRVSDARHRFF-EML 375
            ILI                                    GLC   R SDA       M 
Sbjct: 96  AILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMT 155

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL---RSRNLVPTVVTYNTLIDGLCRYG 432
               IPD+ SYN LL G C      EA  L   +   R     P VV+YNT+++G  + G
Sbjct: 156 ELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEG 215

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
           D + A      M+++GILPDV+TY+ ++   CK   +  A E  N M++ G+ PD   Y 
Sbjct: 216 DSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 275

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
           + + G    G   EA    ++M + G  P+++TY+ L++ LCK G   EA ++   M   
Sbjct: 276 SILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKR 335

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
           G  PD  TY +++      G L     L + M+R G+ P    + +LI A+A + +++ A
Sbjct: 336 GLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQA 395

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
            + FS+M+  G+ PNV+ Y  +I+ LC+   +D A   F  M +EG+ PN   YT LI+ 
Sbjct: 396 MLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHG 455

Query: 673 NCNAGNWQEALRLYKEMLDREI 694
            C    W +A  L  EMLDR I
Sbjct: 456 LCTCDKWDKAEELILEMLDRGI 477



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 78/186 (41%), Gaps = 42/186 (22%)

Query: 581 FNNMLRKG---LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
           +N M R G   ++PT+ TY +LI      GRL+L F     +  KG R + IT+  L+ G
Sbjct: 77  YNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKG 136

Query: 638 LCRLRRIDQAYGLFI-DMEEEGILPNKYTYTILINENCNAGNWQEALRL----------- 685
           LC  +R   A  + +  M E G +P+ ++Y  L+   C+    QEAL L           
Sbjct: 137 LCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGG 196

Query: 686 ---------------------------YKEMLDREIEPDYCTHSALLLKQLDKDYKVHAV 718
                                      Y EMLDR I PD  T+S+++           A+
Sbjct: 197 SPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAM 256

Query: 719 EYLESL 724
           E L ++
Sbjct: 257 EVLNTM 262


>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
 gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 170/562 (30%), Positives = 281/562 (50%), Gaps = 32/562 (5%)

Query: 173 IKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR 232
           I   +LL     K+S V+  + ++  M    + P     N +I  L + G+   AREV+ 
Sbjct: 118 ISFYNLLFRCSLKESRVDCVIWLYKDMAVARVKPQTYTFNLLISALCEMGYLENAREVFD 177

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
            M E G KP+  +   ++  +C+ G     ++LL EM+  G  PN V YN +I+     G
Sbjct: 178 KMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEG 237

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA------LNLEEEMVTRGVAP 346
           +  +A  L+  M ++GL     ++N  I    + G ++EA      + ++EEM      P
Sbjct: 238 QTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGL--PKP 295

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
              TYN+++ G C  G   +AR   F+ ++ +    + SYN  + G  RSG + EA L+ 
Sbjct: 296 NTVTYNLMLEGFCSEGMFEEAR-AIFDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLIL 354

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
           +E+  +N+ P + +YN L+ GLC+YG    A+ +   M   G+ PD +TY+ +++G C+ 
Sbjct: 355 NEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRR 414

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G +  A     EM++ G  P+ +     +    K G  SEA  L + M  +G+  D +T 
Sbjct: 415 GKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTC 474

Query: 527 NVLVHGLCKLGSLEEANELLRKM----------VGDGFI-------------PDHITYTS 563
           N +++GLCK G+L++A E++  M          +G+ FI             PD ITY +
Sbjct: 475 NTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYAT 534

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           II    ++G +   +     M+ K LSP  + +   I+ +  +G+L  AF    EM+ KG
Sbjct: 535 IIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKG 594

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
              ++ TYN+LI GL    +I + YGL  +M+E GI PN YTY  +I+     G  ++A 
Sbjct: 595 CNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDAT 654

Query: 684 RLYKEMLDREIEPDYCTHSALL 705
            L  EML + I P+  T   L+
Sbjct: 655 CLLDEMLQKGISPNIYTFRILI 676



 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 186/633 (29%), Positives = 286/633 (45%), Gaps = 52/633 (8%)

Query: 120 VKRDEFVFCTILEILIESGLLRSAYWVVETVV---CVNMHGILDVLIGGGLSSCVSIKIL 176
           VK   + F  ++  L E G L +A  V + +    C      L +L+ G           
Sbjct: 149 VKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRG----------- 197

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
                 Y +  +    + + ++M  +G LP+    N +I  L   G +V+A ++   M E
Sbjct: 198 ------YCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMRE 251

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG----CSPNGVTYNVLITGFSRNG 292
            G+ P IVT+N  + + CK G++ EA  +  +MQ         PN VTYN+++ GF   G
Sbjct: 252 VGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEG 311

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
             E+AR +  D +K    +S  SYN  + G    G L+EA  +  EM  + + P L +YN
Sbjct: 312 MFEEARAIF-DSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYN 370

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
           IL++GLCK+G  SDAR     M    V PD ++Y+TLL+GYCR G I EA  +  E+   
Sbjct: 371 ILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQV 430

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
              P + T N L+  L + G    A+ L + M  +G   D +T   M+NG CK GNL  A
Sbjct: 431 GCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKA 490

Query: 473 REFFNEMLRKGLQ-----------------------PDRFAYTTQIAGELKLGDTSEAYR 509
            E  + M  +G                         PD   Y T I G  K+G   EA +
Sbjct: 491 IEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKK 550

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
              EM+ K   PD + ++  ++  CK G L  A  +L++M   G      TY S+I    
Sbjct: 551 KLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLG 610

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
               +     L + M  +G+ P + TY  +I   +  G+L+ A     EM  KGI PN+ 
Sbjct: 611 SENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIY 670

Query: 630 TYNALINGLCRLRRIDQAYGLF-IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
           T+  LI    +      A  LF I +   G    +  Y+ + NE    G   +A  L++ 
Sbjct: 671 TFRILIGAFFKACDFGAAQELFEIALSLCG--HKESLYSFMFNELLAGGETLKAKELFEA 728

Query: 689 MLDREIEPDYCTHSALLLKQLDKDYKVHAVEYL 721
            LDR +      +   L+++L KD K+    ++
Sbjct: 729 ALDRSLALKNFLYRD-LIEKLCKDGKLDDASFI 760



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 125/455 (27%), Positives = 209/455 (45%), Gaps = 57/455 (12%)

Query: 168 SSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKA 227
           S  +S++  ++ +L   +   + +  L+ N+M    + P++ + N ++  L   G    A
Sbjct: 326 SETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDA 385

Query: 228 REVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITG 287
           R +  +M E G+ P  VTY+T+L  +C+ G++ EA  +L EM   GC PN  T N+L+  
Sbjct: 386 RSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHS 445

Query: 288 FSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA-- 345
             + G   +A  L++ M + G  +   + N +I G  + G L +A+ +   M TRG A  
Sbjct: 446 LWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASL 505

Query: 346 ---------------------PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDII 384
                                P   TY  +I GLCK GRV +A+ +  EM+ K + PD +
Sbjct: 506 GNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSL 565

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
            ++T +Y YC+ G +  AF +  E+  +    ++ TYN+LI GL     +     L + M
Sbjct: 566 IFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEM 625

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
             +GI P+V TY  +++   + G L  A    +EML+KG+ P+ + +   I    K  D 
Sbjct: 626 KERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDF 685

Query: 505 SEAYRLQE------------------EMLAKG--------FPPDL--------ITYNVLV 530
             A  L E                  E+LA G        F   L          Y  L+
Sbjct: 686 GAAQELFEIALSLCGHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLI 745

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
             LCK G L++A+ +L KM+   +  D  ++  +I
Sbjct: 746 EKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVI 780



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 168/345 (48%), Gaps = 6/345 (1%)

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           P I  YN L     +   +     L+ ++    + P   T+N LI  LC  G LE A+++
Sbjct: 116 PPISFYNLLFRCSLKESRVDCVIWLYKDMAVARVKPQTYTFNLLISALCEMGYLENAREV 175

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
            + M  +G  P+  +  I+V G C+ G  S   +  +EM   G  P+R AY T I+    
Sbjct: 176 FDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCG 235

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI----P 556
            G T EA +L E+M   G  PD++T+N  +  LCK G + EA+ + R M  D  +    P
Sbjct: 236 EGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKP 295

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
           + +TY  ++      G     R +F++M +   + +L +Y + +      G+L  A +  
Sbjct: 296 NTVTYNLMLEGFCSEGMFEEARAIFDSM-KNSETLSLRSYNIWMLGLVRSGKLLEAHLIL 354

Query: 617 SEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNA 676
           +EM  K I+PN+ +YN L++GLC+      A  +   M E G+ P+  TY+ L++  C  
Sbjct: 355 NEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRR 414

Query: 677 GNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYL 721
           G   EA  + +EM+     P+  T + +LL  L K+ +    E L
Sbjct: 415 GKILEANYVLREMIQVGCFPNMYTCN-ILLHSLWKEGRASEAEDL 458



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 139/305 (45%), Gaps = 35/305 (11%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P  +TY T++   CK G + EA + L EM G+  SP+ + ++  I  + + G+L  A  +
Sbjct: 527 PDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRV 586

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +++M K G   S  +YN +I G   +  + E   L +EM  RG+ P + TYN +I  L +
Sbjct: 587 LKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSE 646

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA------------------ 402
            G++ DA     EML+K + P+I ++  L+  + ++ + G A                  
Sbjct: 647 GGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLY 706

Query: 403 -FL---------------LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMIN 446
            F+               LF+    R+L      Y  LI+ LC+ G L+ A  +   M++
Sbjct: 707 SFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMD 766

Query: 447 QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ-IAGELKLGDTS 505
           +    D  ++  +++   K G+   A EF   M+    + D   +  + I G L   D S
Sbjct: 767 KQYSFDPASFMPVIDELGKRGSKHAADEFAERMMEMASETDFNEHENKNIRGRLNNNDES 826

Query: 506 EAYRL 510
           +  ++
Sbjct: 827 DWQKI 831



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 61/134 (45%)

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           P +  Y +L        R++     + +M V  ++P   T+N LI+ LC +  ++ A  +
Sbjct: 116 PPISFYNLLFRCSLKESRVDCVIWLYKDMAVARVKPQTYTFNLLISALCEMGYLENAREV 175

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLD 710
           F  M E+G  PN+++  IL+   C AG     + L  EM      P+   ++ ++     
Sbjct: 176 FDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCG 235

Query: 711 KDYKVHAVEYLESL 724
           +   V A + +E +
Sbjct: 236 EGQTVEAEKLVEKM 249


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 158/506 (31%), Positives = 260/506 (51%), Gaps = 1/506 (0%)

Query: 194 LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
           ++ +KM+  G++ DV   N +IK L        A  +   M   G+KP  +T+ T++  F
Sbjct: 144 MLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGF 203

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
            +EG++  AL++  +M G GC    V+  VL+ GF + G +E+A   + ++ + G     
Sbjct: 204 IEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQ 263

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
            ++N ++ G+   G + +AL++ + M+ +G  P + TYN LI G+CK G    A     +
Sbjct: 264 VTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQ 323

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M+ +   P+ ++YNTL+   C+   I  A  L   L S+ L+P V T+NTLI GLC   +
Sbjct: 324 MILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKN 383

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
            ++A ++ E M N+G  PD  TY+I+++  C    L  A     EM   G   +   Y T
Sbjct: 384 QDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNT 443

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            I G  K     +A  + ++M   G     +TYN L+ GLCK   +EEA++L+ +M+ +G
Sbjct: 444 LIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEG 503

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
             PD  TY S++     +GD+ +  D+   M   G  P + TY  LI      GR+++A 
Sbjct: 504 LKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVAS 563

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
                +Q+KGI      YN +I  L   +R  +   LF +M E+   P+  T+ I+    
Sbjct: 564 KLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGL 623

Query: 674 CNAGN-WQEALRLYKEMLDREIEPDY 698
           CN G   QEA+    EML++ I P++
Sbjct: 624 CNGGGPIQEAIDFTVEMLEKGILPEF 649



 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 158/507 (31%), Positives = 253/507 (49%), Gaps = 4/507 (0%)

Query: 198 KMLRN--GLLPDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           K+L N  G  PD    N  +  L  DN   +      +M+ E GI   + T+N ++ + C
Sbjct: 111 KILENELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNE-GIVLDVSTFNVLIKALC 169

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K  +++ A+ +L EM   G  P+ +T+  L+ GF   G+L  A  + + ML  G  ++  
Sbjct: 170 KAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNV 229

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           S   ++ G+ ++G + EAL    E+   G +P   T+N L+ G C+ G V+DA      M
Sbjct: 230 SVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFM 289

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           + K   PD+ +YN+L+ G C+ G   +A  +  ++  R   P  VTYNTLI  LC+  ++
Sbjct: 290 IEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEI 349

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           E A  L   ++++G+LPDV T+  ++ G C   N  +A E F EM  KG +PD F Y+  
Sbjct: 350 EAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSIL 409

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I          EA  L +EM + G   + + YN L+ GLCK   +E+A E+  +M   G 
Sbjct: 410 IDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGV 469

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
               +TY ++I    +   +     L + M+ +GL P   TY  L+      G +E A  
Sbjct: 470 SRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGD 529

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
               M   G  P++ TY  LI GLCR  R+D A  L   ++ +GI+   + Y  +I    
Sbjct: 530 IVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALF 589

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTH 701
                +E +RL++EM+++   PD  TH
Sbjct: 590 MRKRTKEGMRLFREMMEKSDPPDALTH 616



 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 158/567 (27%), Positives = 273/567 (48%), Gaps = 15/567 (2%)

Query: 110 FFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSS 169
             + +E + G K D   +   L  L+E   L+    +   +V  N   +LDV        
Sbjct: 109 LLKILENELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMV--NEGIVLDV-------- 158

Query: 170 CVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE 229
                  ++L+    K   +   +L+  +M  +GL PD      +++   + G    A +
Sbjct: 159 ----STFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALK 214

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           + + M  +G   + V+   +++ FCKEG ++EAL  + E+   G SP+ VT+N L+ GF 
Sbjct: 215 MKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFC 274

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           R G +  A  ++  M++ G     ++YN +I G  + G   +A+ + ++M+ R  +P   
Sbjct: 275 RIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTV 334

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           TYN LI  LCK   +  A      ++ K ++PD+ ++NTL+ G C S N   A  +F+E+
Sbjct: 335 TYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEM 394

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
           +++   P   TY+ LID LC    L+ A  L + M + G   + + Y  +++G CK   +
Sbjct: 395 KNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRI 454

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A E F++M   G+      Y T I G  K     EA +L ++M+ +G  PD  TYN L
Sbjct: 455 EDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSL 514

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           +   C++G +E+A ++++ M  +G  PD  TY ++I      G +     L  ++  KG+
Sbjct: 515 LTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGI 574

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR-LRRIDQAY 648
             T   Y  +I A   R R +     F EM  K   P+ +T+  +  GLC     I +A 
Sbjct: 575 VLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAI 634

Query: 649 GLFIDMEEEGILPNKYTYTILINENCN 675
              ++M E+GILP   ++  L    C+
Sbjct: 635 DFTVEMLEKGILPEFPSFGFLAEGLCS 661



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 141/471 (29%), Positives = 239/471 (50%), Gaps = 8/471 (1%)

Query: 241 PSIVTYN------TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
           PS  T++      T+L    +         LL +++  G  PN  T+  LI  F+   E+
Sbjct: 47  PSSTTHHPLPPNETLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEI 106

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           E    ++ +  +LG K   + YN  +    E   L     L  +MV  G+   ++T+N+L
Sbjct: 107 ENLLKILEN--ELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVL 164

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           I  LCK  ++  A     EM    + PD I++ TL+ G+   G++  A  +  ++     
Sbjct: 165 IKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGC 224

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
           + T V+   L++G C+ G +E A +    +  +G  PD +T+  +VNG C++GN++ A +
Sbjct: 225 LLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALD 284

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
             + M+ KG  PD + Y + I+G  KLG+  +A  + ++M+ +   P+ +TYN L+  LC
Sbjct: 285 IVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALC 344

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           K   +E A +L R +V  G +PD  T+ ++I       +     ++F  M  KG  P   
Sbjct: 345 KENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEF 404

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           TY++LI +     RL+ A M   EM+  G   N + YN LI+GLC+ RRI+ A  +F  M
Sbjct: 405 TYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQM 464

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           E  G+  +  TY  LI+  C     +EA +L  +M+   ++PD  T+++LL
Sbjct: 465 ELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLL 515



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 156/345 (45%), Gaps = 38/345 (11%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           ++  GLLPDV   N +I+ L  +     A E++  M   G KP   TY+ ++DS C E  
Sbjct: 359 LVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERR 418

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           ++EAL LL EM+  GC+ N V YN LI G  ++  +E A  +   M  LG+  S+ +YN 
Sbjct: 419 LKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNT 478

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           +I G  +   + EA  L ++M+  G+ P   TYN L+   C+ G +  A      M    
Sbjct: 479 LIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNG 538

Query: 379 VIPDIISYNTLLYGYCRSGNIG-----------------------------------EAF 403
             PDI +Y TL+ G CR+G +                                    E  
Sbjct: 539 CEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGM 598

Query: 404 LLFDELRSRNLVPTVVTYNTLIDGLCRYG-DLEVAQQLKENMINQGILPDVITYTIMVNG 462
            LF E+  ++  P  +T+  +  GLC  G  ++ A      M+ +GILP+  ++  +  G
Sbjct: 599 RLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEG 658

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
            C +       E  N ++ K    +R   T+ I G LK+   ++A
Sbjct: 659 LCSLSMEDTLIELINMVMEKAQMSER--ETSMIRGFLKIRKFNDA 701


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 176/585 (30%), Positives = 288/585 (49%), Gaps = 44/585 (7%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEFGIKP 241
           Y K   +++   ++  M+R+G+LPDV   + ++  L RD  FS +A  ++R M + G+ P
Sbjct: 267 YCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFS-EAYALFREMDKIGVAP 325

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGC--------------------------- 274
           + VTY T++DS  K     E+L LL EM  RG                            
Sbjct: 326 NHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVL 385

Query: 275 --------SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEK 326
                   +PN VTY VL+    R G ++ A  ++  M +  +  +  +++ II G  ++
Sbjct: 386 RHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKR 445

Query: 327 GLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISY 386
           G L +A +   +M   G+AP + TY  LI G  K+     A   + +ML + V  +    
Sbjct: 446 GCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVV 505

Query: 387 NTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMIN 446
           ++L+ G  ++GNI  A  LF ++  R L+   V Y TL+DGL + G++  A ++ + ++ 
Sbjct: 506 DSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELME 565

Query: 447 QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSE 506
           + + PD + Y + +N  C +G  S A+ F  EM   GL+PD+  Y T IA   + G TS+
Sbjct: 566 KNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSK 625

Query: 507 AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
           A +L +EM      P+LITY  LV GL + G +++A  LL +M   GF P  +T+  ++ 
Sbjct: 626 ALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQ 685

Query: 567 ASLEMGDLRRGR---DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           A       RR     ++   M+  GL   +  Y  L+H     G    A +   EM  +G
Sbjct: 686 AC---SGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRG 742

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
           I P+ IT+NALI G C+   +D A+ ++  M  +G+ PN  T+  L+    +AG   EA 
Sbjct: 743 IAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEAD 802

Query: 684 RLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVE-YLESLTLG 727
            +  +M    +EP+  T+  L+     K  KV A+  Y E ++ G
Sbjct: 803 TVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKG 847



 Score =  263 bits (671), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 179/639 (28%), Positives = 289/639 (45%), Gaps = 52/639 (8%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           GV  D     T L  L  +GL+  A  + E +V       LDV +G            + 
Sbjct: 145 GVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDGLDV-VG-----------WNA 192

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  Y K   +   L V  +M   G+  DV   N ++     +G +  A EV   M   G
Sbjct: 193 LIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADG 252

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           ++P++VTY  ++  +CK   M EA  L   M   G  P+ VT + L+ G  R+G+  +A 
Sbjct: 253 VEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAY 312

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV-------------- 344
            L R+M K+G+  +  +Y  +I   ++     E+L L  EMV+RGV              
Sbjct: 313 ALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRL 372

Query: 345 ---------------------APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
                                 P   TY +L+   C+ G +  A     +M  K+VIP++
Sbjct: 373 GKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNV 432

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
           +++++++ G  + G +G+A     +++   + P VVTY TLIDG  ++   E A  +  +
Sbjct: 433 VTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRD 492

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           M+++G+  +      +VNG  K GN+  A   F +M  +GL  D   YTT + G  K G+
Sbjct: 493 MLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGN 552

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
              A+++ +E++ K   PD + YNV ++ LC LG   EA   L++M   G  PD  TY +
Sbjct: 553 MPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNT 612

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           +I A    G   +   L   M R  + P L+TYT L+      G ++ A    +EM   G
Sbjct: 613 MIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAG 672

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
             P  +T+  ++      RR D    +   M   G+  +   Y  L++  C  G  + A 
Sbjct: 673 FAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNAT 732

Query: 684 RLYKEMLDREIEPDYCTHSALLL-----KQLDKDYKVHA 717
            +  EML R I PD  T +AL+L       LD  + ++A
Sbjct: 733 VVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYA 771



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 149/516 (28%), Positives = 250/516 (48%), Gaps = 3/516 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
            EQ LL   +M    ++P+V   + II  L   G   KA +  R M + GI P++VTY T
Sbjct: 416 AEQVLL---QMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGT 472

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++D F K    + AL++  +M   G   N    + L+ G  +NG +E A  L +DM + G
Sbjct: 473 LIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERG 532

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           L +   +Y  ++ G  + G +  A  + +E++ + ++P    YN+ I  LC  G+ S+A+
Sbjct: 533 LLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAK 592

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               EM    + PD  +YNT++   CR G   +A  L  E++  ++ P ++TY TL+ GL
Sbjct: 593 SFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGL 652

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
              G ++ A+ L   M + G  P  +T+  ++          +  E    M+  GL  D 
Sbjct: 653 LEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADI 712

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             Y T +      G    A  + +EML +G  PD IT+N L+ G CK   L+ A  +  +
Sbjct: 713 TVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQ 772

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M+  G  P+  T+ +++      G +     + ++M + GL P  +TY +L+  +A +  
Sbjct: 773 MLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSN 832

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
              A   + EM  KG  P   TYN+L++   +   ++QA  LF +M+  G+L    TY I
Sbjct: 833 KVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDI 892

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
           L+N      N  E   L K+M +   +P   T S++
Sbjct: 893 LLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSM 928



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 150/542 (27%), Positives = 249/542 (45%), Gaps = 39/542 (7%)

Query: 207 DVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELL 266
           D  + N  +  L + G    A  V   M + G+    VT +T L   C+ G + EA  L 
Sbjct: 114 DTVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAAL- 172

Query: 267 WEMQGRGCSPNG---VTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGY 323
            EM  RG   +G   V +N LI G+ +  ++  A  ++  M   G+ +    YN ++ G+
Sbjct: 173 AEMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGF 232

Query: 324 SEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
              G    AL + E M   GV P + TY  LI   CK   + +A   +  M+R  V+PD+
Sbjct: 233 FHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDV 292

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY------------ 431
           ++ + L+ G CR G   EA+ LF E+    + P  VTY TLID L +             
Sbjct: 293 VTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGE 352

Query: 432 -----------------------GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
                                  G +E A+ +  +  +  I P+ +TYT++V+  C+ GN
Sbjct: 353 MVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGN 412

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
           +  A +   +M  K + P+   +++ I G +K G   +A     +M   G  P+++TY  
Sbjct: 413 IDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGT 472

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           L+ G  K    E A ++ R M+ +G   ++    S+++   + G++     LF +M  +G
Sbjct: 473 LIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERG 532

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
           L    V YT L+      G +  AF    E+  K + P+ + YN  IN LC L +  +A 
Sbjct: 533 LLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAK 592

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQ 708
               +M   G+ P++ TY  +I   C  G   +AL+L KEM    I+P+  T++ L++  
Sbjct: 593 SFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGL 652

Query: 709 LD 710
           L+
Sbjct: 653 LE 654



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 122/367 (33%), Positives = 182/367 (49%), Gaps = 8/367 (2%)

Query: 344 VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF 403
           VA    +YNI +  L + G    A     EM ++ V  D ++ +T L G CR+G +GEA 
Sbjct: 111 VAADTVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAA 170

Query: 404 LLFDEL-RSRNLVP-TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
            L + L R R +    VV +N LIDG C+  D+  A  + E M  QG+  DV+ Y  +V 
Sbjct: 171 ALAEMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVA 230

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
           G    G+   A E    M   G++P+   YT  I    K     EA+ L E M+  G  P
Sbjct: 231 GFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLP 290

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD-- 579
           D++T + LV GLC+ G   EA  L R+M   G  P+H+TY ++I +   +   RRG +  
Sbjct: 291 DVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDS---LAKARRGSESL 347

Query: 580 -LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
            L   M+ +G+   LV YT L+      G++E A       Q   I PN +TY  L++  
Sbjct: 348 GLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAH 407

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
           CR   ID A  + + MEE+ ++PN  T++ +IN     G   +A    ++M D  I P+ 
Sbjct: 408 CRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNV 467

Query: 699 CTHSALL 705
            T+  L+
Sbjct: 468 VTYGTLI 474



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 197/394 (50%), Gaps = 4/394 (1%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V  +++   L PD    N  I  L   G   +A+   + M   G++P   TYNTM+ + C
Sbjct: 559 VGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARC 618

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           +EG+  +AL+LL EM+     PN +TY  L+ G    G +++A+ L+ +M   G   ++ 
Sbjct: 619 REGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSL 678

Query: 315 SYNPII--CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
           ++  ++  C  S +  ++  L + E M+  G+   +  YN L++ LC  G   +A     
Sbjct: 679 THQRVLQACSGSRRPDVI--LEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLD 736

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
           EML + + PD I++N L+ G+C+S ++  AF ++ ++  + L P + T+NTL+ GL   G
Sbjct: 737 EMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAG 796

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
            +  A  +  +M   G+ P+ +TY I+V G  K  N   A   + EM+ KG  P    Y 
Sbjct: 797 RIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYN 856

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
           + ++   K G  ++A  L  EM  +G      TY++L++G  KL +  E   LL+ M   
Sbjct: 857 SLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKEL 916

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           GF P   T +S+  A    G     R L   + +
Sbjct: 917 GFKPSKGTISSMSRAFSRPGMTGEARRLLKTLFK 950



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 169/346 (48%), Gaps = 16/346 (4%)

Query: 96  VLNRIRE-KPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVN 154
           +  R RE K   AL+  + ++ +  +K +   + T++  L+E+G+++ A +++  +    
Sbjct: 614 IAARCREGKTSKALKLLKEMK-RNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAG 672

Query: 155 MHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRI 214
                 +     L +C   +  D++L I+               M+  GL  D+   N +
Sbjct: 673 F-APTSLTHQRVLQACSGSRRPDVILEIH-------------ELMMGAGLHADITVYNTL 718

Query: 215 IKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGC 274
           + VL  +G +  A  V   M   GI P  +T+N ++   CK   +  A  +  +M  +G 
Sbjct: 719 VHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGL 778

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
           SPN  T+N L+ G    G + +A  ++ DM K+GL+ +  +Y+ ++ GY++K   VEAL 
Sbjct: 779 SPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALR 838

Query: 335 LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
           L  EMV++G  P  +TYN L+    K G ++ A+  F EM R+ V+    +Y+ LL G+ 
Sbjct: 839 LYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWS 898

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           +  N  E  +L  +++     P+  T +++     R G    A++L
Sbjct: 899 KLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGEARRL 944



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 89/227 (39%), Gaps = 41/227 (18%)

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLR----KMVGDGFIPDHITYTSIIHASLEMGDLR 575
           P D +T N ++   C L SL  A  LLR             D ++Y   + A  E G  R
Sbjct: 73  PGDTLTLNSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADTVSYNIFLAALSEQGHGR 132

Query: 576 RGRDLFNNMLRKGLSPTLVTY---------TVLIHAHAA------RGR------------ 608
               + + M ++G+S   VT          T L+   AA      RGR            
Sbjct: 133 LAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDGLDVVGWNA 192

Query: 609 ----------LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
                     +  A      M  +G+  +V+ YN+L+ G       D A  +   M+ +G
Sbjct: 193 LIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADG 252

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           + PN  TYT LI E C      EA  LY+ M+   + PD  T SAL+
Sbjct: 253 VEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALV 299



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 65/131 (49%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           D+L+  Y KKS   + L ++ +M+  G +P     N ++      G   +A+E++  M  
Sbjct: 821 DILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKR 880

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G+  +  TY+ +L+ + K     E   LL +M+  G  P+  T + +   FSR G   +
Sbjct: 881 RGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGE 940

Query: 297 ARGLIRDMLKL 307
           AR L++ + K+
Sbjct: 941 ARRLLKTLFKV 951


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  268 bits (686), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 153/509 (30%), Positives = 264/509 (51%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K+   ++    +++ML  G+LPDV   N II  L       KA EV   M + G+ P 
Sbjct: 206 FFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPD 265

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            +TYN++L  +C  G+ +EA+  L +M+  G  P+ VTY++L+    +NG   +AR +  
Sbjct: 266 CMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFD 325

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M K GLK    +Y  ++ GY+ KG LVE   L + MV  G+ P    ++ILI    K G
Sbjct: 326 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQG 385

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           +V  A   F +M ++ + P+ ++Y  ++   C+SG + +A L F+++    L P  + YN
Sbjct: 386 KVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYN 445

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           +LI GLC     E A++L   M+++GI  + I +  +++  CK G +  + + F  M+R 
Sbjct: 446 SLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRI 505

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G++P+   Y T I G    G   EA +L   M++ G  P+ +TY+ L++G CK+  +E+A
Sbjct: 506 GVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDA 565

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             L ++M   G  PD ITY  I+    +       ++L+  +   G    L TY +++H 
Sbjct: 566 LVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHG 625

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
                  + A   F  + +  ++    T+N +I+ L ++ R D+A  LF+     G++PN
Sbjct: 626 LCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 685

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLD 691
            +TY ++       G  +E  +L+  M D
Sbjct: 686 YWTYRLMAENIIGQGLLEELDQLFLSMED 714



 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 157/500 (31%), Positives = 252/500 (50%), Gaps = 3/500 (0%)

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM---QGRGCSPNGVTYNVLIT 286
           V R M E G  P++ +YN +L   C E   QEALELL  M   +G G  P+ V+Y  +I 
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           GF + G+ ++A     +ML  G+     +YN II    +   + +A+ +   MV  GV P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
              TYN +++G C  G+  +A     +M    V PD+++Y+ L+   C++G   EA  +F
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIF 324

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
           D +  R L P + TY TL+ G    G L     L + M+  GI PD   ++I++    K 
Sbjct: 325 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQ 384

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G +  A   F++M ++GL P+   Y   I    K G   +A    E+M+ +G  P  I Y
Sbjct: 385 GKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVY 444

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           N L+HGLC     E A EL+ +M+  G   + I + SII +  + G +     LF  M+R
Sbjct: 445 NSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVR 504

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
            G+ P ++TY  LI+ +   G+++ A    S M   G++PN +TY+ LING C++ R++ 
Sbjct: 505 IGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMED 564

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
           A  LF +ME  G+ P+  TY I++           A  LY  + +   + +  T++ +L 
Sbjct: 565 ALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILH 624

Query: 707 KQLDKDYKVHAVEYLESLTL 726
                     A++  ++L L
Sbjct: 625 GLCKNKLTDDALQMFQNLCL 644



 Score =  258 bits (659), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 155/499 (31%), Positives = 257/499 (51%), Gaps = 3/499 (0%)

Query: 194 LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE---FGIKPSIVTYNTML 250
           +V  +M   G +P+V + N ++K L D   S +A E+  MM +    G  P +V+Y T++
Sbjct: 144 IVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVI 203

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
           + F KEG+  +A     EM  RG  P+ VTYN +I    +   +++A  ++  M+K G+ 
Sbjct: 204 NGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVM 263

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
               +YN I+ GY   G   EA+   ++M + GV P + TY++L+  LCK GR  +AR  
Sbjct: 264 PDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKI 323

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
           F  M ++ + P+I +Y TLL GY   G + E   L D +    + P    ++ LI    +
Sbjct: 324 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAK 383

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
            G ++ A  +   M  QG+ P+ +TY  ++   CK G +  A  +F +M+ +GL P    
Sbjct: 384 QGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIV 443

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           Y + I G         A  L  EML +G   + I +N ++   CK G + E+ +L   MV
Sbjct: 444 YNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMV 503

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
             G  P+ ITY ++I+     G +     L + M+  GL P  VTY+ LI+ +    R+E
Sbjct: 504 RIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRME 563

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
            A + F EM+  G+ P++ITYN ++ GL + RR   A  L++ + E G      TY I++
Sbjct: 564 DALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIIL 623

Query: 671 NENCNAGNWQEALRLYKEM 689
           +  C      +AL++++ +
Sbjct: 624 HGLCKNKLTDDALQMFQNL 642



 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 130/435 (29%), Positives = 234/435 (53%), Gaps = 4/435 (0%)

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
           +P+  TY +LI    R G L+     + +++K G +V A ++ P++ G        +A++
Sbjct: 84  TPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMD 143

Query: 335 LE-EEMVTRGVAPTLATYNILIYGLCKWGRVSDA---RHRFFEMLRKNVIPDIISYNTLL 390
           +    M   G  P + +YNIL+ GLC   R  +A    H   +       PD++SY T++
Sbjct: 144 IVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVI 203

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
            G+ + G+  +A+  + E+  R ++P VVTYN++I  LC+   ++ A ++   M+  G++
Sbjct: 204 NGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVM 263

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
           PD +TY  +++G C  G    A  F  +M   G++PD   Y+  +    K G   EA ++
Sbjct: 264 PDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKI 323

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
            + M  +G  P++ TY  L+ G    G+L E + LL  MV +G  PDH  ++ +I A  +
Sbjct: 324 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAK 383

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
            G + +   +F+ M ++GL+P  VTY  +I      GR+E A +YF +M  +G+ P  I 
Sbjct: 384 QGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIV 443

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           YN+LI+GLC   + ++A  L ++M + GI  N   +  +I+ +C  G   E+ +L++ M+
Sbjct: 444 YNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMV 503

Query: 691 DREIEPDYCTHSALL 705
              ++P+  T++ L+
Sbjct: 504 RIGVKPNVITYNTLI 518



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 135/442 (30%), Positives = 203/442 (45%), Gaps = 43/442 (9%)

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG---VAPTLATY 351
           E AR +  ++L+ G   S +  N  +   +       A++    M   G   V P L TY
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARDSP-AAAVSRYNRMARAGADEVTPDLCTY 90

Query: 352 NILI-----------------------------------YGLCKWGRVSDARHRFF-EML 375
            ILI                                    GLC   R SDA       M 
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL---RSRNLVPTVVTYNTLIDGLCRYG 432
               IP++ SYN LL G C      EA  L   +   R     P VV+Y T+I+G  + G
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
           D + A      M+++GILPDV+TY  ++   CK   +  A E  N M++ G+ PD   Y 
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
           + + G    G   EA    ++M + G  PD++TY++L+  LCK G   EA ++   M   
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
           G  P+  TY +++      G L     L + M+R G+ P    +++LI A+A +G+++ A
Sbjct: 331 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQA 390

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
            + FS+M+ +G+ PN +TY A+I  LC+  R++ A   F  M +EG+ P    Y  LI+ 
Sbjct: 391 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 450

Query: 673 NCNAGNWQEALRLYKEMLDREI 694
            C    W+ A  L  EMLDR I
Sbjct: 451 LCTCNKWERAEELILEMLDRGI 472



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 141/539 (26%), Positives = 250/539 (46%), Gaps = 49/539 (9%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G+  D   + +I+  L ++  +  A  V+ T+V             G +  C++    + 
Sbjct: 226 GILPDVVTYNSIIAALCKAQAMDKAMEVLNTMV-----------KNGVMPDCMT---YNS 271

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           +L  Y      ++ +    KM  +G+ PDV   + ++  L  NG  ++AR+++  M + G
Sbjct: 272 ILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRG 331

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           +KP I TY T+L  +  +G + E   LL  M   G  P+   +++LI  +++ G+++QA 
Sbjct: 332 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAM 391

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            +   M + GL  +A +Y  +I    + G + +A+   E+M+  G++P    YN LI+GL
Sbjct: 392 LVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGL 451

Query: 359 C---KW--------------------------------GRVSDARHRFFEMLRKNVIPDI 383
           C   KW                                GRV ++   F  M+R  V P++
Sbjct: 452 CTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNV 511

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
           I+YNTL+ GYC +G + EA  L   + S  L P  VTY+TLI+G C+   +E A  L + 
Sbjct: 512 ITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKE 571

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           M + G+ PD+ITY I++ G  +    + A+E +  +   G Q +   Y   + G  K   
Sbjct: 572 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKL 631

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
           T +A ++ + +       +  T+N+++  L K+G  +EA +L      +G +P++ TY  
Sbjct: 632 TDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRL 691

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
           +    +  G L     LF +M   G +        ++     RG +  A  Y S +  K
Sbjct: 692 MAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEK 750



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 133/498 (26%), Positives = 234/498 (46%), Gaps = 15/498 (3%)

Query: 103 KPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVL 162
           +P+ A+ F + + +  GV+ D   +  +++ L ++G             C+    I D +
Sbjct: 281 QPKEAIGFLKKMRSD-GVEPDVVTYSLLMDYLCKNGR------------CMEARKIFDSM 327

Query: 163 IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG 222
              GL     I     LL  Y  K  + +   + + M+RNG+ PD    + +I      G
Sbjct: 328 TKRGLKP--EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQG 385

Query: 223 FSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYN 282
              +A  V+  M + G+ P+ VTY  ++   CK G +++A+    +M   G SP  + YN
Sbjct: 386 KVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYN 445

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
            LI G     + E+A  LI +ML  G+ ++   +N II  + ++G ++E+  L E MV  
Sbjct: 446 SLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRI 505

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           GV P + TYN LI G C  G++ +A      M+   + P+ ++Y+TL+ GYC+   + +A
Sbjct: 506 GVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDA 565

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
            +LF E+ S  + P ++TYN ++ GL +      A++L   +   G   ++ TY I+++G
Sbjct: 566 LVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHG 625

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            CK      A + F  +    L+ +   +   I   LK+G   EA  L     + G  P+
Sbjct: 626 LCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 685

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
             TY ++   +   G LEE ++L   M  +G   D      I+   L+ G++ R     +
Sbjct: 686 YWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLS 745

Query: 583 NMLRKGLSPTLVTYTVLI 600
            +  K  S    T ++ I
Sbjct: 746 MIDEKHFSLEASTASLFI 763



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 156/313 (49%), Gaps = 10/313 (3%)

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG----ILPDVITY 456
           +A  +FDEL  R    ++   N  +  + R  D   A   + N + +     + PD+ TY
Sbjct: 33  DARHVFDELLRRGRGASIYGLNRALADVAR--DSPAAAVSRYNRMARAGADEVTPDLCTY 90

Query: 457 TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ-EEML 515
            I++   C+ G L +       +++KG + D  A+T  + G      TS+A  +    M 
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 516 AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD---GFIPDHITYTSIIHASLEMG 572
             G  P++ +YN+L+ GLC     +EA ELL  M  D   G  PD ++YT++I+   + G
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
           D  +    ++ ML +G+ P +VTY  +I A      ++ A    + M   G+ P+ +TYN
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
           ++++G C   +  +A G    M  +G+ P+  TY++L++  C  G   EA +++  M  R
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330

Query: 693 EIEPDYCTHSALL 705
            ++P+  T+  LL
Sbjct: 331 GLKPEITTYGTLL 343



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 118/263 (44%), Gaps = 14/263 (5%)

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG--FPPDLITYNVL 529
           AR  F+E+LR+G     +     +A   +    +   R      A      PDL TY +L
Sbjct: 34  ARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGIL 93

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK-- 587
           +   C+ G L+     L  ++  GF  D I +T ++     +   +R  D  + +LR+  
Sbjct: 94  IGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG---LCADKRTSDAMDIVLRRMT 150

Query: 588 --GLSPTLVTYTVLIHAHAARGR----LELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
             G  P + +Y +L+       R    LEL  M  ++ +  G  P+V++Y  +ING  + 
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHM-MADDRGGGSPPDVVSYTTVINGFFKE 209

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
              D+AY  + +M + GILP+  TY  +I   C A    +A+ +   M+   + PD  T+
Sbjct: 210 GDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTY 269

Query: 702 SALLLKQLDKDYKVHAVEYLESL 724
           +++L           A+ +L+ +
Sbjct: 270 NSILHGYCSSGQPKEAIGFLKKM 292



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/249 (20%), Positives = 101/249 (40%), Gaps = 10/249 (4%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE-----VYRMMGEF 237
           Y     +++ + + + M+  GL P+    + +I     NG+   +R      +++ M   
Sbjct: 521 YCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLI-----NGYCKISRMEDALVLFKEMESS 575

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G+ P I+TYN +L    +      A EL   +   G      TYN+++ G  +N   + A
Sbjct: 576 GVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDA 635

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             + +++  + LK+ A ++N +I    + G   EA +L     + G+ P   TY ++   
Sbjct: 636 LQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAEN 695

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           +   G + +    F  M       D    N ++    + G I  A      +  ++    
Sbjct: 696 IIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLE 755

Query: 418 VVTYNTLID 426
             T +  ID
Sbjct: 756 ASTASLFID 764


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  268 bits (686), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 158/504 (31%), Positives = 260/504 (51%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V+  +  FN+ML     P +   N+I+           A  +   +   GI+P ++T N 
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++ FC  G++     +L ++  RG  P+ VT N LI G    G++++A      +L  G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            +++  SY  +I G  + G    A+    ++  R   P +  YN +I  +CK+  VS+A 
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAY 219

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F EM  K +  D+++YNTL+YG+C  G + EA  L +E+  + + P V TYN L+D L
Sbjct: 220 GLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G ++ A+ +   M+   + PDVITY+ +++G   +  +  A+  FN M   G+ PD 
Sbjct: 280 CKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDV 339

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             YT  I G  K     EA  L +EM  K   P ++TY+ L+ GLCK G +    +L+ +
Sbjct: 340 HTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDE 399

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M   G   D ITY+S+I    + G L R   LFN M  + + P + T+T+L+      GR
Sbjct: 400 MRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGR 459

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           L+ A   F ++  KG   NV TYN +ING C+   +++A  +   ME+ G +PN +T+  
Sbjct: 460 LKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFET 519

Query: 669 LINENCNAGNWQEALRLYKEMLDR 692
           +I          +A +L ++M+ R
Sbjct: 520 IIIALFKKDENDKAEKLLRQMIAR 543



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 148/484 (30%), Positives = 250/484 (51%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P I+ +N +LDSF K      A+ L   ++ +G  P+ +T N+LI  F   G++     +
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  +LK G      + N +I G   KG + +AL+  ++++ +G      +Y  LI G+CK
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G    A     ++  +   PD++ YNT++   C+   + EA+ LF E+  + +   VVT
Sbjct: 177 IGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVT 236

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YNTLI G C  G L+ A  L   M+ + I P+V TY I+V+  CK G +  A+     ML
Sbjct: 237 YNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML 296

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           +  ++PD   Y+T + G   + +  +A  +   M   G  PD+ TY +L++G CK   ++
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD 356

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA  L ++M     +P  +TY+S+I    + G +    DL + M  +G    ++TY+ LI
Sbjct: 357 EALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLI 416

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                 G L+ A   F++M+ + IRPN+ T+  L++GLC+  R+  A  +F D+  +G  
Sbjct: 417 DGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYH 476

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
            N YTY ++IN +C  G  +EAL +  +M D    P+  T   +++    KD    A + 
Sbjct: 477 LNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKL 536

Query: 721 LESL 724
           L  +
Sbjct: 537 LRQM 540



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 115/375 (30%), Positives = 192/375 (51%)

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
           +A++    M+     P +  +N ++    K    S A      +  K + PD+I+ N L+
Sbjct: 42  DAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILI 101

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
             +C  G I   F +  ++  R   P  VT NTLI GLC  G ++ A    + ++ QG  
Sbjct: 102 NCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQ 161

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
            + ++Y  ++NG CK+G+   A +F  ++  +  +PD   Y T I    K    SEAY L
Sbjct: 162 LNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGL 221

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
             EM  KG   D++TYN L++G C +G L+EA  LL +MV     P+  TY  ++ A  +
Sbjct: 222 FSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCK 281

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
            G ++  + +   ML+  + P ++TY+ L+  +     ++ A   F+ M + G+ P+V T
Sbjct: 282 EGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHT 341

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           Y  LING C+ + +D+A  LF +M ++ ++P   TY+ LI+  C +G       L  EM 
Sbjct: 342 YTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMR 401

Query: 691 DREIEPDYCTHSALL 705
           DR    D  T+S+L+
Sbjct: 402 DRGQPADVITYSSLI 416



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 102/342 (29%), Positives = 176/342 (51%)

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           V DA  +F  ML     P II +N +L  + +  +   A  L   L  + + P ++T N 
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           LI+  C  G +     +   ++ +G  PD +T   ++ G C  G +  A  F +++L +G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
            Q ++ +Y T I G  K+GDT  A +   ++  +   PD++ YN ++  +CK   + EA 
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAY 219

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
            L  +M   G   D +TY ++I+    +G L+    L N M+ K ++P + TY +L+ A 
Sbjct: 220 GLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
              G+++ A    + M    ++P+VITY+ L++G   +  + +A  +F  M   G+ P+ 
Sbjct: 280 CKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDV 339

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +TYTILIN  C      EAL L+KEM  + + P   T+S+L+
Sbjct: 340 HTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLI 381


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  268 bits (685), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 159/542 (29%), Positives = 285/542 (52%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K+  V++   +F++M+  G  PDV   + +I  L       KA  + + M + G+ P+
Sbjct: 213 FFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPN 272

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             TYN M+  +C  G+++EA+ LL +M G G  P+ VTY +LI  + + G   +AR +  
Sbjct: 273 TRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFD 332

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M++ G K ++  Y+ ++ GY+ KG L++  +L + M+  G+      +NILI    K G
Sbjct: 333 SMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHG 392

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            V  A   F EM +  + PD++SY+T+++  C+ G + +A   F+++ S  L P ++++ 
Sbjct: 393 AVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFT 452

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           +LI GLC  G+ +  ++L   MIN+GI PD I    +++  CK G +  A++FF+ ++  
Sbjct: 453 SLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHI 512

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G++P+  +Y T I G   +G   E+ +  + M++ G  PD  TYN L++G  K G +E+A
Sbjct: 513 GVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDA 572

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             L R+M         IT   I+H   + G +   R+L+  M+ +G    + TY  ++  
Sbjct: 573 LALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGG 632

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
                 ++ A   F +++ K    +V T+N +IN L ++ RID+A  LF  M   G +P+
Sbjct: 633 LCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPH 692

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLE 722
             TY+++I      G  +E+  L+  M       D    + ++ + L+K     A  YL 
Sbjct: 693 VITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRAGTYLT 752

Query: 723 SL 724
            +
Sbjct: 753 KI 754



 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 162/556 (29%), Positives = 279/556 (50%), Gaps = 38/556 (6%)

Query: 194 LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM---GEFGIKPSIVTYNTML 250
           +VF +M   G  PDV + N +IK L     S +A E+   M   G +   P++V+Y+T++
Sbjct: 151 MVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTII 210

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
           D F KEGE+ +A  L  EM G+G  P+ VTY+ LI G  +   + +A  +++ M   G+ 
Sbjct: 211 DGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVM 270

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
            +  +YN +I GY   G L EA+ L ++M   G+ P + TY +LI   CK GR ++AR  
Sbjct: 271 PNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSV 330

Query: 371 FFEMLRKNVIPDIISYNTLLYGYC-----------------------------------R 395
           F  M+RK   P+   Y+ LL+GY                                    +
Sbjct: 331 FDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAK 390

Query: 396 SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
            G + +A   F E+R   L P VV+Y+T+I  LC+ G +E A      M+++G+ P++I+
Sbjct: 391 HGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIIS 450

Query: 456 YTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML 515
           +T +++G C +G      E   EM+ +G+ PD     T +    K G   EA    + ++
Sbjct: 451 FTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVI 510

Query: 516 AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLR 575
             G  P++++YN L+ G C +G ++E+ +   +MV  G  PD  TY ++++   + G + 
Sbjct: 511 HIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVE 570

Query: 576 RGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALI 635
               L+  M RK +    +T  +++H     GR+  A   + +M  +G +  + TYN ++
Sbjct: 571 DALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVL 630

Query: 636 NGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIE 695
            GLC    +D+A  +F D+  +    + +T+ I+IN     G   EA  L+  M+ R   
Sbjct: 631 GGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPV 690

Query: 696 PDYCTHSALLLKQLDK 711
           P   T+S ++  ++++
Sbjct: 691 PHVITYSLMIKSRIEE 706



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 153/498 (30%), Positives = 259/498 (52%), Gaps = 4/498 (0%)

Query: 212 NRIIKVLRDNGFSVKARE-VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQ 270
           N++IK L D   +  A + V+R M E G  P + +YN ++   C E + QEALELL  M 
Sbjct: 133 NQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMT 192

Query: 271 GRG---CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKG 327
             G   CSPN V+Y+ +I GF + GE+++A  L  +M+  G      +Y+ +I G  +  
Sbjct: 193 ADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQ 252

Query: 328 LLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYN 387
            + +A  + + M  +GV P   TYNI+I G C  G++ +A     +M    + PD+++Y 
Sbjct: 253 AMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYI 312

Query: 388 TLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
            L+  YC+ G   EA  +FD +  +   P    Y+ L+ G    G L   + L + MI  
Sbjct: 313 LLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRD 372

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
           GI  +   + I++    K G +  A   F EM + GL+PD  +Y+T I    K+G   +A
Sbjct: 373 GIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDA 432

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
                +M+++G  P++I++  L+HGLC +G  ++  EL  +M+  G  PD I   +I+  
Sbjct: 433 VYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDN 492

Query: 568 SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
             + G +   +D F+ ++  G+ P +V+Y  LI  +   G+++ +   F  M   G+RP+
Sbjct: 493 LCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPD 552

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYK 687
             TYNAL+NG  +  R++ A  L+ +M  + +     T  I+++    AG    A  LY 
Sbjct: 553 SWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYM 612

Query: 688 EMLDREIEPDYCTHSALL 705
           +M+DR  +    T++ +L
Sbjct: 613 KMVDRGTQLRIETYNTVL 630



 Score =  225 bits (574), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 129/435 (29%), Positives = 226/435 (51%), Gaps = 4/435 (0%)

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
           + N     +LI  F   G L+ A       LK+G +V   + N +I G  +     +A++
Sbjct: 91  AANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMD 150

Query: 335 LE-EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK---NVIPDIISYNTLL 390
           +    M   G  P + +YN LI GLC   +  +A      M      N  P+++SY+T++
Sbjct: 151 MVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTII 210

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
            G+ + G + +A+ LFDE+  +   P VVTY++LIDGLC+   +  A+ + ++M ++G++
Sbjct: 211 DGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVM 270

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
           P+  TY IM+ G C +G L  A     +M   GLQPD   Y   I    K+G  +EA  +
Sbjct: 271 PNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSV 330

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
            + M+ KG  P+   Y++L+HG    G+L +  +LL  M+ DG   +H  +  +I A  +
Sbjct: 331 FDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAK 390

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
            G + +    F  M + GL P +V+Y+ +IH     GR+E A  +F++M  +G+ PN+I+
Sbjct: 391 HGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIIS 450

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           + +LI+GLC +    +   L  +M   GI P+      +++  C  G   EA   +  ++
Sbjct: 451 FTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVI 510

Query: 691 DREIEPDYCTHSALL 705
              ++P+  +++ L+
Sbjct: 511 HIGVKPNVVSYNTLI 525



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 149/581 (25%), Positives = 266/581 (45%), Gaps = 53/581 (9%)

Query: 127 FCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSI--KILDLLLLIYT 184
           + TI++   + G +  AY+            + D +IG G    V     ++D L     
Sbjct: 206 YSTIIDGFFKEGEVDKAYF------------LFDEMIGQGFPPDVVTYSSLIDGL----C 249

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   + +   +   M   G++P+ +  N +I+     G   +A  + + M   G++P +V
Sbjct: 250 KAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVV 309

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY  ++  +CK G   EA  +   M  +G  PN   Y++L+ G++  G L   R L+  M
Sbjct: 310 TYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLM 369

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           ++ G+     ++N +IC Y++ G + +A+    EM   G+ P + +Y+ +I+ LCK GRV
Sbjct: 370 IRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRV 429

Query: 365 SDARHRF-----------------------------------FEMLRKNVIPDIISYNTL 389
            DA + F                                   FEM+ + + PD I  NT+
Sbjct: 430 EDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTI 489

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
           +   C+ G + EA   FD +    + P VV+YNTLIDG C  G ++ + +  + M++ G+
Sbjct: 490 MDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGL 549

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
            PD  TY  ++NG  K G +  A   + EM RK ++         + G  + G    A  
Sbjct: 550 RPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARE 609

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           L  +M+ +G    + TYN ++ GLC+   ++EA  +   +    F  D  T+  +I+A L
Sbjct: 610 LYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALL 669

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
           ++G +   + LF+ M+ +G  P ++TY+++I +    G LE +   F  M+  G   +  
Sbjct: 670 KVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSH 729

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
             N +I  L     + +A      ++E+       T  +LI
Sbjct: 730 MLNVIIRRLLEKGDVRRAGTYLTKIDEKNFSVEASTAALLI 770



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 94/217 (43%), Gaps = 9/217 (4%)

Query: 122 RDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLL 181
           R +  FC I   +I  GL ++   V    + + M       +  G    + I+  + +L 
Sbjct: 581 RKDVKFCAITSNIILHGLFQAGRIVAARELYMKM-------VDRGTQ--LRIETYNTVLG 631

Query: 182 IYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKP 241
              + S V++ L +F  +       DV   N +I  L   G   +A+ ++  M   G  P
Sbjct: 632 GLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVP 691

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
            ++TY+ M+ S  +EG ++E+ +L   M+  GC+ +    NV+I      G++ +A   +
Sbjct: 692 HVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRAGTYL 751

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
             + +    V A +   +I   SEK    E   L E+
Sbjct: 752 TKIDEKNFSVEASTAALLIPIVSEKKYQKEVKFLPEK 788


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  268 bits (685), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 152/543 (27%), Positives = 280/543 (51%), Gaps = 3/543 (0%)

Query: 186 KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIK---PS 242
           K + E   ++  +M   G  P+V + N ++K   D   + +A E+  MM +  ++   P+
Sbjct: 144 KRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPN 203

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +V+YNT+++ F  EG++ +A  L  +M  +G  PN VTY ++I G  +   +++A G+ +
Sbjct: 204 LVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQ 263

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M+  G++ +  +Y  +I GY   G   E + + +EM   G+ P   TY +L+  LCK G
Sbjct: 264 QMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKG 323

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           + ++AR  F  M+RK + PD+  Y  +L+GY   G + E     D +    + P    +N
Sbjct: 324 KCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFN 383

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            +     +   +  A  +   M  QG+ P+V+ Y  +++  CK+G +  A   FN+M+ +
Sbjct: 384 IVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINE 443

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G+ P+   +T+ + G   +    +A  L  EM+ +G  P+++ +N ++  LC  G + +A
Sbjct: 444 GVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKA 503

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             L+  M   G  PD I+Y ++I     +G       L + ML  GL P   TY  L+H 
Sbjct: 504 QRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHG 563

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
           +   GR++ A+  F EM   GI P V+TYN +++GL + RR  +A  L+++M   G   +
Sbjct: 564 YCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWS 623

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLE 722
            YTY I++N         EAL++++ +  ++++ D  T + ++   L    K  A+    
Sbjct: 624 IYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFA 683

Query: 723 SLT 725
           +++
Sbjct: 684 TIS 686



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 145/489 (29%), Positives = 255/489 (52%), Gaps = 6/489 (1%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF---GIKP 241
           K  +V++   VF +M+  G+ P++     +I      G   + +EV RM+ E    G++P
Sbjct: 251 KAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIG---QWKEVVRMLKEMSAHGLEP 307

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
              TY  +LD  CK+G+  EA +L   M  +G  P+   Y +++ G++  G L +    +
Sbjct: 308 DCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFL 367

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
             M+  G+  + + +N + C +++K ++ EA+++  +M  +G++P +  Y  LI  LCK 
Sbjct: 368 DLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKL 427

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           GRV DA  +F +M+ + V P+I+ + +L+YG C      +A  LF E+ ++ + P VV +
Sbjct: 428 GRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFF 487

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           NT++  LC  G +  AQ+L + M   G  PD+I+Y  ++ G C +G    A +  + ML 
Sbjct: 488 NTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLS 547

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
            GL+P+   Y T + G  + G   +AY + +EML+ G  P ++TYN ++HGL K     E
Sbjct: 548 VGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSE 607

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A EL   M+  G      TY  I++   +   +     +F ++  K L   ++T+ ++I 
Sbjct: 608 AKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIG 667

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
           A    GR E A   F+ +   G+ P+V TY  +   L     +++  G+F +ME+ G  P
Sbjct: 668 ALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAP 727

Query: 662 NKYTYTILI 670
           N      L+
Sbjct: 728 NSLMLNFLV 736



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 146/507 (28%), Positives = 245/507 (48%), Gaps = 40/507 (7%)

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALE---------------------------------- 264
           + P + TY+ ++  FC+ G ++                                      
Sbjct: 90  VAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEA 149

Query: 265 ---LLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH---SYNP 318
              LL  M   GC+PN V+YN L+ GF      E+A  L+  M    ++       SYN 
Sbjct: 150 MGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNT 209

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           +I G+  +G + +A NL  +M  +G+ P + TY I+I GLCK   V  A   F +M+ K 
Sbjct: 210 VINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKG 269

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
           V P+I++Y  L++GY   G   E   +  E+ +  L P   TY  L+D LC+ G    A+
Sbjct: 270 VRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEAR 329

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
           +L ++MI +GI PDV  Y I+++G    G LS    F + M+  G+ P+ + +       
Sbjct: 330 KLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAF 389

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
            K     EA  +  +M  +G  P+++ Y  L+  LCKLG +++A     +M+ +G  P+ 
Sbjct: 390 AKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNI 449

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
           + +TS+++    +    +  +LF  M+ +G+ P +V +  ++      GR+  A      
Sbjct: 450 VVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDL 509

Query: 619 MQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGN 678
           M+  G RP++I+YNALI G C + + D+A  L   M   G+ PN+ TY  L++  C  G 
Sbjct: 510 MERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGR 569

Query: 679 WQEALRLYKEMLDREIEPDYCTHSALL 705
             +A  +++EML   I P   T++ +L
Sbjct: 570 IDDAYSVFQEMLSNGITPVVVTYNTIL 596



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 136/463 (29%), Positives = 218/463 (47%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           LLL    KK    +   +F+ M+R G+ PDV     I+      G   +      +M   
Sbjct: 314 LLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGN 373

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           GI P+   +N +  +F K+  + EA+++  +M+ +G SPN V Y  LI    + G ++ A
Sbjct: 374 GISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDA 433

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
                 M+  G+  +   +  ++ G        +A  L  EMV +G+ P +  +N ++  
Sbjct: 434 ELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCN 493

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           LC  GRV  A+     M R    PDIISYN L+ G+C  G   EA  L D + S  L P 
Sbjct: 494 LCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPN 553

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
             TYNTL+ G CR G ++ A  + + M++ GI P V+TY  +++G  K    S A+E + 
Sbjct: 554 ECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYL 613

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            M+  G Q   + Y   + G  K     EA ++ + + +K    D+IT+N+++  L K G
Sbjct: 614 NMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDG 673

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
             E+A  L   +  +G +PD  TY  I    +E G L     +F+ M + G +P  +   
Sbjct: 674 RKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLN 733

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
            L+     RG +  A  Y S++  K       T + LI+   R
Sbjct: 734 FLVRRLLLRGDISRAGAYLSKIDEKNFSLEASTTSMLISLFSR 776



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 137/482 (28%), Positives = 228/482 (47%), Gaps = 14/482 (2%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G++ D F +  +L+ L + G             C     + D +I  G+   VSI    +
Sbjct: 304 GLEPDCFTYGLLLDYLCKKG------------KCTEARKLFDSMIRKGIKPDVSI--YGI 349

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           +L  Y  K  + +     + M+ NG+ P+    N +           +A +++  M + G
Sbjct: 350 ILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQG 409

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           + P++V Y T++D+ CK G + +A     +M   G +PN V +  L+ G     + E+A 
Sbjct: 410 LSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAG 469

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L  +M+  G+  +   +N I+C    +G +++A  L + M   G  P + +YN LI G 
Sbjct: 470 ELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGH 529

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C  G+  +A      ML   + P+  +YNTLL+GYCR G I +A+ +F E+ S  + P V
Sbjct: 530 CLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVV 589

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           VTYNT++ GL +      A++L  NMI  G    + TY I++NG  K   +  A + F  
Sbjct: 590 VTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQS 649

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           +  K LQ D   +   I   LK G   +A  L   + A G  PD+ TY ++   L + GS
Sbjct: 650 LCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGS 709

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           LEE + +  +M   G  P+ +    ++   L  GD+ R     + +  K  S    T ++
Sbjct: 710 LEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDEKNFSLEASTTSM 769

Query: 599 LI 600
           LI
Sbjct: 770 LI 771



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 160/333 (48%), Gaps = 28/333 (8%)

Query: 395 RSGN--IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL------EVAQQLKENMIN 446
           R+G+  + +A  LFDE        +++ +N L+  +            E+       MI 
Sbjct: 25  RAGSLSVDDALKLFDEFLHHARPASIIAFNQLLAAVSSASRRGSSSTSELVVSCFNRMIR 84

Query: 447 ---QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
                + PDV TY+I+V   C+MG L      F  +L+ G + +      ++     L  
Sbjct: 85  DCCSKVAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRL-----LKG 139

Query: 504 TSEAYRLQE-------EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI- 555
             +A R+ E        M   G  P++++YN L+ G C     EEA ELL  M+ DG + 
Sbjct: 140 LCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLH-MMADGQVR 198

Query: 556 ---PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
              P+ ++Y ++I+     G + +  +LF +M  +G+ P +VTYT++I        ++ A
Sbjct: 199 SCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRA 258

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
              F +M  KG+RPN++TY  LI+G   + +  +   +  +M   G+ P+ +TY +L++ 
Sbjct: 259 EGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDY 318

Query: 673 NCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            C  G   EA +L+  M+ + I+PD   +  +L
Sbjct: 319 LCKKGKCTEARKLFDSMIRKGIKPDVSIYGIIL 351



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/155 (21%), Positives = 74/155 (47%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           SI   +++L   +K + V++ L +F  +    L  D+   N +I  L  +G    A  ++
Sbjct: 623 SIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLF 682

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             +   G+ P + TY  + ++  +EG ++E   +  EM+  GC+PN +  N L+      
Sbjct: 683 ATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLR 742

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEK 326
           G++ +A   +  + +    + A + + +I  +S +
Sbjct: 743 GDISRAGAYLSKIDEKNFSLEASTTSMLISLFSRE 777


>gi|297844892|ref|XP_002890327.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336169|gb|EFH66586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 903

 Score =  268 bits (685), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 180/621 (28%), Positives = 311/621 (50%), Gaps = 3/621 (0%)

Query: 77  RWVSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIE 136
           R+ + H  ++    ELL  +L R+R  P   +  F     Q   + D   +C ++ IL  
Sbjct: 57  RYEALHDLSLDFSDELLNSILRRLRLNPEACVEIFNLASKQQKFRPDYKAYCKMVHILSR 116

Query: 137 SGLLRSAYWVVETVVCVNMHG--ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLL 194
           +         +  +V +N  G  +   L+        S  + D++L +Y +K MV+  L 
Sbjct: 117 ARNYGQTKSYLCELVALNHSGFVVWGELVRVFKEFSFSPTVFDMILKVYAEKGMVKNALH 176

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           VF+ M + G +P + +CN ++  L   G +  A  VY  M  F + P + T + +++++C
Sbjct: 177 VFDNMGKYGRIPSLLSCNSLLSNLVKKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYC 236

Query: 255 KEGEMQEALELLWEMQGR-GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           + G++ +A+    EM    G   N VT N LI G++  G++E    ++R M + G+  + 
Sbjct: 237 RCGKVDKAMAFAKEMDNSLGLELNVVTCNSLINGYAMIGDVEGMTRVLRLMSERGVSRNV 296

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
            ++  +I  Y +KGL+ EA  + E +  + + P    + +LI G C+ GR+ DA      
Sbjct: 297 VTFTSLIKSYCKKGLMEEAEQVFELVTEKKLVPDQHMHGVLIDGYCRNGRICDAVRVHDY 356

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M+   V  +    N+L+ GYC+SG + EA  +   +   +L P   TYNTL+DG CR G 
Sbjct: 357 MIEMGVRTNTTICNSLINGYCKSGQLVEAEQILTRMNDWSLKPDHHTYNTLVDGYCRAGH 416

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           ++ A +L   M  + ++P V+TY I++ G  ++G        +  ML++G+  +  + +T
Sbjct: 417 VDEALKLCGRMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVTANEISCST 476

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            +    KLGD  EA +L E +LA+G   D IT NV++ GLCK+  + EA E+L  +    
Sbjct: 477 LLEALFKLGDFDEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFR 536

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
             PD  TY ++ H    +G+L+    + + M +KG+ PT+  Y  LI        L    
Sbjct: 537 CKPDVQTYQALSHGYYNVGNLKEAFAVKDFMEKKGIFPTIEMYNTLISGAFKYKHLNKVA 596

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
               E++ +G+ P V TY ALI G C +  ID+AY    +M E+GI  N    + + N  
Sbjct: 597 DLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSL 656

Query: 674 CNAGNWQEALRLYKEMLDREI 694
                + EA  L ++++D ++
Sbjct: 657 FRLDKFDEACLLLQKIVDFDL 677



 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 181/628 (28%), Positives = 301/628 (47%), Gaps = 65/628 (10%)

Query: 85  AVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAY 144
           A++ D E + RVL  + E+               GV R+   F ++++   + GL+  A 
Sbjct: 272 AMIGDVEGMTRVLRLMSER---------------GVSRNVVTFTSLIKSYCKKGLMEEAE 316

Query: 145 WVVETVV------CVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNK 198
            V E V         +MHG   VLI G                 Y +   +   + V + 
Sbjct: 317 QVFELVTEKKLVPDQHMHG---VLIDG-----------------YCRNGRICDAVRVHDY 356

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           M+  G+  +   CN +I     +G  V+A ++   M ++ +KP   TYNT++D +C+ G 
Sbjct: 357 MIEMGVRTNTTICNSLINGYCKSGQLVEAEQILTRMNDWSLKPDHHTYNTLVDGYCRAGH 416

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           + EAL+L   M  +   P  +TYN+L+ G+SR G       L + MLK G+  +  S + 
Sbjct: 417 VDEALKLCGRMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVTANEISCST 476

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           ++    + G   EA+ L E ++ RG+     T N++I GLCK  +V++A+     +    
Sbjct: 477 LLEALFKLGDFDEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFR 536

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
             PD+ +Y  L +GY   GN+ EAF + D +  + + PT+  YNTLI G  +Y  L    
Sbjct: 537 CKPDVQTYQALSHGYYNVGNLKEAFAVKDFMEKKGIFPTIEMYNTLISGAFKYKHLNKVA 596

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
            L   +  +G+ P V TY  ++ G C +G +  A     EM+ KG+  +     ++IA  
Sbjct: 597 DLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLN-VNICSKIANS 655

Query: 499 L-KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE---LLRKMVGDG- 553
           L +L    EA  L ++         ++ +++L+ G   L    E +    L  + + +  
Sbjct: 656 LFRLDKFDEACLLLQK---------IVDFDLLLPGYQSLKEFLEPSATTCLKTQKIAESV 706

Query: 554 --------FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG-LSPTLVTYTVLIHAHA 604
                    +P++I Y   I    + G L   + LF+++L      P   TYT+LIH  A
Sbjct: 707 ENSTPKKLLVPNNIVYNVAIAGLCKAGKLTDAQKLFSDLLSSDRFIPDEYTYTILIHGCA 766

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
             G +  AF    EM +KGI PN++TYNALI GLC+L  +D+A  L   + ++G  PN  
Sbjct: 767 IDGDINKAFNLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLRKLPQKGTTPNAI 826

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDR 692
           TY  LI+    +G+  EA+RL ++M+++
Sbjct: 827 TYNTLIDGLIKSGDVAEAMRLKEKMIEK 854



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 121/424 (28%), Positives = 216/424 (50%), Gaps = 8/424 (1%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           ++   ++LL  Y++       L ++  ML+ G+  +  +C+ +++ L   G   +A +++
Sbjct: 435 TVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVTANEISCSTLLEALFKLGDFDEAMKLW 494

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             +   G+    +T N M+   CK  ++ EA E+L  +    C P+  TY  L  G+   
Sbjct: 495 ENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPDVQTYQALSHGYYNV 554

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G L++A  +   M K G+  +   YN +I G  +   L +  +L  E+  RG+ PT+ATY
Sbjct: 555 GNLKEAFAVKDFMEKKGIFPTIEMYNTLISGAFKYKHLNKVADLVIELRARGLTPTVATY 614

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
             LI G C  G +  A    FEM+ K +  ++   + +     R     EA LL  ++  
Sbjct: 615 GALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKFDEACLLLQKIVD 674

Query: 412 RNLVPTVVTYNTLIDGLCRYGDL-----EVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
            +L+  +  Y +L + L           ++A+ ++ +   + ++P+ I Y + + G CK 
Sbjct: 675 FDLL--LPGYQSLKEFLEPSATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKA 732

Query: 467 GNLSMAREFFNEMLRKG-LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
           G L+ A++ F+++L      PD + YT  I G    GD ++A+ L++EM  KG  P+++T
Sbjct: 733 GKLTDAQKLFSDLLSSDRFIPDEYTYTILIHGCAIDGDINKAFNLRDEMALKGIIPNIVT 792

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           YN L+ GLCKLG+++ A  LLRK+   G  P+ ITY ++I   ++ GD+     L   M+
Sbjct: 793 YNALIKGLCKLGNVDRAQRLLRKLPQKGTTPNAITYNTLIDGLIKSGDVAEAMRLKEKMI 852

Query: 586 RKGL 589
            KGL
Sbjct: 853 EKGL 856



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 182/395 (46%), Gaps = 36/395 (9%)

Query: 312 SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRF 371
           S   ++ I+  Y+EKG++  AL++ + M   G  P+L + N L+  L K G    A H +
Sbjct: 154 SPTVFDMILKVYAEKGMVKNALHVFDNMGKYGRIPSLLSCNSLLSNLVKKGENFVALHVY 213

Query: 372 FEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL-RSRNLVPTVVTYNTLIDGLCR 430
            +M+   V PD+ + + ++  YCR G + +A     E+  S  L   VVT N+LI+G   
Sbjct: 214 DQMISFEVSPDVFTCSIVVNAYCRCGKVDKAMAFAKEMDNSLGLELNVVTCNSLINGYAM 273

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
            GD+E   ++   M  +G+  +V+T+T ++   CK G +  A + F  +  K L PD+  
Sbjct: 274 IGDVEGMTRVLRLMSERGVSRNVVTFTSLIKSYCKKGLMEEAEQVFELVTEKKLVPDQHM 333

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           +   I G  + G   +A R+ + M+  G   +    N L++G CK G L EA ++L +M 
Sbjct: 334 HGVLIDGYCRNGRICDAVRVHDYMIEMGVRTNTTICNSLINGYCKSGQLVEAEQILTRM- 392

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
                                          N+     L P   TY  L+  +   G ++
Sbjct: 393 -------------------------------NDW---SLKPDHHTYNTLVDGYCRAGHVD 418

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
            A      M  K + P V+TYN L+ G  R+        L+  M + G+  N+ + + L+
Sbjct: 419 EALKLCGRMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVTANEISCSTLL 478

Query: 671 NENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
                 G++ EA++L++ +L R +  D  T + ++
Sbjct: 479 EALFKLGDFDEAMKLWENVLARGLLTDTITLNVMI 513



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 148/335 (44%), Gaps = 49/335 (14%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +++   V + M + G+ P ++  N +I          K  ++   +   G+ P++ TY  
Sbjct: 557 LKEAFAVKDFMEKKGIFPTIEMYNTLISGAFKYKHLNKVADLVIELRARGLTPTVATYGA 616

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNG--------------------------VTYN 282
           ++  +C  G + +A    +EM  +G + N                           V ++
Sbjct: 617 LITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKFDEACLLLQKIVDFD 676

Query: 283 VLITGFSRNGE-LEQARGLIRDMLKLGLKVSAHS-----------YNPIICGYSEKGLLV 330
           +L+ G+    E LE +        K+   V   +           YN  I G  + G L 
Sbjct: 677 LLLPGYQSLKEFLEPSATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLT 736

Query: 331 EALNLEEEMVTRG-VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTL 389
           +A  L  ++++     P   TY ILI+G    G ++ A +   EM  K +IP+I++YN L
Sbjct: 737 DAQKLFSDLLSSDRFIPDEYTYTILIHGCAIDGDINKAFNLRDEMALKGIIPNIVTYNAL 796

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
           + G C+ GN+  A  L  +L  +   P  +TYNTLIDGL + GD+  A +LKE MI +G 
Sbjct: 797 IKGLCKLGNVDRAQRLLRKLPQKGTTPNAITYNTLIDGLIKSGDVAEAMRLKEKMIEKG- 855

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
                    +V GS K G++   +E  +  ++ G+
Sbjct: 856 ---------LVRGSYKQGDVDKPKEVLDPGVKLGI 881


>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g15630, mitochondrial; Flags: Precursor
 gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 627

 Score =  268 bits (685), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 181/608 (29%), Positives = 297/608 (48%), Gaps = 23/608 (3%)

Query: 39  SISESNNKDSVLNPESESYYKELIISTVEEKPWAFCNNRWVSDHFQAVVSDPELLVRVLN 98
           S+++++  +SVL P +     E+++ ++    W    +  V+D        P L+   L 
Sbjct: 31  SLAQTSTPESVLPPITS----EILLESIRSSQWHIVEH--VADKLT-----PSLVSTTLL 79

Query: 99  RIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGI 158
            + + P +A  F   ++     + D    C  + ++ +    +    +++ VV    + I
Sbjct: 80  SLVKTPNLAFNFVNHIDL---YRLDFQTQCLAIAVISKLSSPKPVTQLLKEVVTSRKNSI 136

Query: 159 LD-----VLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNR 213
            +     VL    L +  +I + DLL+    +  MV++ +  F  M   G  P  + CN 
Sbjct: 137 RNLFDELVLAHDRLETKSTI-LFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNH 195

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
           I+ +L        A   Y  M    IK ++ T+N M++  CKEG++++A   L  M+  G
Sbjct: 196 ILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFG 255

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
             P  VTYN L+ GFS  G +E AR +I +M   G +    +YNPI+     +G   E L
Sbjct: 256 IKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVL 315

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
               EM   G+ P   +YNILI G    G +  A     EM+++ ++P   +YNTL++G 
Sbjct: 316 ---REMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGL 372

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
                I  A +L  E+R + +V   VTYN LI+G C++GD + A  L + M+  GI P  
Sbjct: 373 FMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQ 432

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
            TYT ++   C+      A E F +++ KG++PD     T + G   +G+   A+ L +E
Sbjct: 433 FTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKE 492

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           M      PD +TYN L+ GLC  G  EEA EL+ +M   G  PDHI+Y ++I    + GD
Sbjct: 493 MDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGD 552

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
            +    + + ML  G +PTL+TY  L+   +     ELA     EM+ +GI PN  ++ +
Sbjct: 553 TKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCS 612

Query: 634 LINGLCRL 641
           +I  +  L
Sbjct: 613 VIEAMSNL 620



 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 145/450 (32%), Positives = 239/450 (53%), Gaps = 3/450 (0%)

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           +A E + +M E G  P   T N +L    +   ++ A     +M       N  T+N++I
Sbjct: 173 EAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMI 232

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
               + G+L++A+G +  M   G+K +  +YN ++ G+S +G +  A  +  EM ++G  
Sbjct: 233 NVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQ 292

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P + TYN ++  +C  GR S+      EM    ++PD +SYN L+ G   +G++  AF  
Sbjct: 293 PDMQTYNPILSWMCNEGRASEV---LREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAY 349

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
            DE+  + +VPT  TYNTLI GL     +E A+ L   +  +GI+ D +TY I++NG C+
Sbjct: 350 RDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQ 409

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
            G+   A    +EM+  G+QP +F YT+ I    +   T EA  L E+++ KG  PDL+ 
Sbjct: 410 HGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVM 469

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
            N L+ G C +G+++ A  LL++M      PD +TY  ++      G     R+L   M 
Sbjct: 470 MNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMK 529

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
           R+G+ P  ++Y  LI  ++ +G  + AFM   EM   G  P ++TYNAL+ GL + +  +
Sbjct: 530 RRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGE 589

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCN 675
            A  L  +M+ EGI+PN  ++  +I    N
Sbjct: 590 LAEELLREMKSEGIVPNDSSFCSVIEAMSN 619



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 142/481 (29%), Positives = 234/481 (48%), Gaps = 41/481 (8%)

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
           S + ++ ++   C+   + EA+E  + M+ +G  P   T N ++T  SR   +E A    
Sbjct: 154 STILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFY 213

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
            DM ++ +K + +                                   T+NI+I  LCK 
Sbjct: 214 ADMYRMEIKSNVY-----------------------------------TFNIMINVLCKE 238

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           G++  A+     M    + P I++YNTL+ G+   G I  A L+  E++S+   P + TY
Sbjct: 239 GKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTY 298

Query: 422 NTLIDGLCRYGDL-EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           N ++  +C  G   EV +++KE     G++PD ++Y I++ G    G+L MA  + +EM+
Sbjct: 299 NPILSWMCNEGRASEVLREMKE----IGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMV 354

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           ++G+ P  + Y T I G         A  L  E+  KG   D +TYN+L++G C+ G  +
Sbjct: 355 KQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAK 414

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           +A  L  +M+ DG  P   TYTS+I+        R   +LF  ++ KG+ P LV    L+
Sbjct: 415 KAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLM 474

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
             H A G ++ AF    EM +  I P+ +TYN L+ GLC   + ++A  L  +M+  GI 
Sbjct: 475 DGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIK 534

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
           P+  +Y  LI+     G+ + A  +  EML     P   T++A LLK L K+ +    E 
Sbjct: 535 PDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNA-LLKGLSKNQEGELAEE 593

Query: 721 L 721
           L
Sbjct: 594 L 594



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 100/341 (29%), Positives = 152/341 (44%), Gaps = 38/341 (11%)

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
           I ++ L+   C+   + EA   F  ++ +   P   T N ++  L R   +E A     +
Sbjct: 156 ILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYAD 215

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           M    I  +V T+ IM+N  CK G L  A+ F   M                        
Sbjct: 216 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIM------------------------ 251

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
             E +         G  P ++TYN LV G    G +E A  ++ +M   GF PD  TY  
Sbjct: 252 --EVF---------GIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNP 300

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           I+      G   R  ++   M   GL P  V+Y +LI   +  G LE+AF Y  EM  +G
Sbjct: 301 ILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQG 357

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
           + P   TYN LI+GL    +I+ A  L  ++ E+GI+ +  TY ILIN  C  G+ ++A 
Sbjct: 358 MVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAF 417

Query: 684 RLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
            L+ EM+   I+P   T+++L+     K+    A E  E +
Sbjct: 418 ALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKV 458


>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1071

 Score =  268 bits (684), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 174/628 (27%), Positives = 304/628 (48%), Gaps = 45/628 (7%)

Query: 105 RIALRFFRWVETQPGVKRDEF--VFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVL 162
           R+AL+F  WV  QPG++      +      IL+ + L  +A  +++ +   +  G+    
Sbjct: 26  RLALKFLNWVIQQPGLELRHLTHMLSITTHILVRARLYENAKSILKHL---SQMGVGSKS 82

Query: 163 IGGGLSSCVSI-----KILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
           + G L +   +      + DLL+ +Y                LR G++ D          
Sbjct: 83  VFGALMNTYPLCKSNPSVFDLLIRVY----------------LREGMVGD---------- 116

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
                    A E +R+MG  G  PS+ T N +L    KE ++        EM  R   P+
Sbjct: 117 ---------ALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEMLARRVCPD 167

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
             T+N+LI      G+L++A  L++ M + G   S  +YN ++  Y +KG    AL L +
Sbjct: 168 VSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELID 227

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
           +M ++G+     TYN+L+  LCK  R +       +M ++ + P+ I+YN+++ G+ + G
Sbjct: 228 QMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEG 287

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
            IG A  +F E+   NL+P  VTYN LIDG C  G+ E A  + E M   G  P+ ++Y+
Sbjct: 288 KIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYS 347

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
            ++NG C+     +++     M   G+     AYT  I G  + G  +E+ +L ++ML  
Sbjct: 348 ALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKD 407

Query: 518 GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
           G  PD++T++VL++G C++G ++   E++ KM   G  P+ I YT++I+   + GD+   
Sbjct: 408 GVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEA 467

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
             ++  M R G         VL+ +    G++ +A  +F  M   G  PN IT++ +ING
Sbjct: 468 FKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIING 527

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
                   +A+ +F +M + G  P+ +TY  L+   C AG ++EA RL  ++       D
Sbjct: 528 YGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVD 587

Query: 698 YCTHSALLLKQLDKDYKVHAVEYLESLT 725
             T++ +L++         AV   + + 
Sbjct: 588 TVTYNTILVETFKSGMLTDAVALFDEMV 615



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 152/556 (27%), Positives = 259/556 (46%), Gaps = 37/556 (6%)

Query: 194 LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
           L+  KM +  + P+    N II      G    A  +++ M    + P+ VTYN ++D  
Sbjct: 259 LLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGH 318

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           C +G  ++AL +L  M+  G  PN V+Y+ L+ G  R+ + E ++ ++  M   G+ V  
Sbjct: 319 CHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGC 378

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
            +Y  +I G    GLL E++ L ++M+  GV P + T+++LI G C+ G++ + +    +
Sbjct: 379 IAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICK 438

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M +  + P+ I Y TL+Y YC++G++ EAF ++  +            N L+  LC+ G 
Sbjct: 439 MYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGK 498

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           + VA+    +M   G +P+ IT+  ++NG    GN   A   F+EM++ G  P  F Y  
Sbjct: 499 VGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGG 558

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            +    + G   EA RL +++       D +TYN ++    K G L +A  L  +MV   
Sbjct: 559 LLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRN 618

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG-LSPTLVTYTVLIHAHAARGRLELA 612
            +PD  TY  I    +  G +      + N+L KG +SP  V YT  +      G+ + A
Sbjct: 619 VLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAA 678

Query: 613 FMYFSEMQVKG------------------------------------IRPNVITYNALIN 636
             +  +M+  G                                    I P++ TYN L++
Sbjct: 679 LYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLH 738

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
           G  + + + +   L+  M   GI P+K T   LI   C +      L+L K+ML   +  
Sbjct: 739 GYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAV 798

Query: 697 DYCTHSALLLKQLDKD 712
           D CT + L++K  + D
Sbjct: 799 DQCTFNMLIMKYCETD 814



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 147/519 (28%), Positives = 253/519 (48%), Gaps = 4/519 (0%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           EQ L +   M   G  P+  + + ++  L  +     ++ +   M   G+    + Y  M
Sbjct: 325 EQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAM 384

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           +D  C+ G + E+++LL +M   G  P+ VT++VLI GF R G+++  + +I  M K GL
Sbjct: 385 IDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGL 444

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
             ++  Y  +I  Y + G +VEA  +   M   G        N+L+  LCK G+V  A +
Sbjct: 445 APNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEY 504

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
            F  M +   +P+ I+++ ++ GY  SGN  +AF +FDE+      P+  TY  L+  LC
Sbjct: 505 FFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALC 564

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
           R G  + A++L + +       D +TY  ++  + K G L+ A   F+EM+++ + PD +
Sbjct: 565 RAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSY 624

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKG-FPPDLITYNVLVHGLCKLGSLEEANELLRK 548
            Y    AG ++ G    A      +L KG   P+ + Y   V GL + G  + A      
Sbjct: 625 TYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCED 684

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG--LSPTLVTYTVLIHAHAAR 606
           M  +G   D I    I++    MG + +  D+F  M+  G  +SP+L TY +L+H +A +
Sbjct: 685 MEKNGLCADLIATNVILNGYSRMGKMAKAGDIF-TMMWSGITISPSLATYNILLHGYAKK 743

Query: 607 GRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
             L      ++ M   GI P+ +T ++LI G C+   +D    L   M  +G+  ++ T+
Sbjct: 744 KNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTF 803

Query: 667 TILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            +LI + C      +A  L   M   +I PD  TH +++
Sbjct: 804 NMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSII 842



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 145/585 (24%), Positives = 260/585 (44%), Gaps = 39/585 (6%)

Query: 175  ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
            I   L+  Y K   V +   V+  M R G   +   CN ++  L  +G    A   +  M
Sbjct: 450  IYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHM 509

Query: 235  GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
             + G  P+ +T++ +++ +   G   +A  +  EM   G  P+  TY  L+    R G+ 
Sbjct: 510  SKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKF 569

Query: 295  EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
            ++A+ L+  +  +   V   +YN I+    + G+L +A+ L +EMV R V P   TY I+
Sbjct: 570  KEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAII 629

Query: 355  IYGLCKWGRVSDARHRFFEMLRKNVI-PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
              GL + G++  A H +  +L K  + P+ + Y T + G  R+G    A    +++    
Sbjct: 630  FAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNG 689

Query: 414  LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL--PDVITYTIMVNGSCKMGNLSM 471
            L   ++  N +++G  R G +  A  +   M+  GI   P + TY I+++G  K  NLS 
Sbjct: 690  LCADLIATNVILNGYSRMGKMAKAGDI-FTMMWSGITISPSLATYNILLHGYAKKKNLSK 748

Query: 472  AREFFNEMLRKGLQPDRFAYTTQIAGELKLG----------------------------- 502
                +N M+R G+ PD+    + I G  K                               
Sbjct: 749  CSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIM 808

Query: 503  ------DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
                  +  +A+ L   M      PD+ T++ ++  L ++ +++E++ LL +M+  G IP
Sbjct: 809  KYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIP 868

Query: 557  DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
            D   Y ++++    MG +     L + M   G+S   V  + L+   A  G++E A +  
Sbjct: 869  DRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVL 928

Query: 617  SEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNA 676
              M  K + P + T+  L++  CR   + +A  L   M+   +  +   Y +LI+  C  
Sbjct: 929  DFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCAD 988

Query: 677  GNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYL 721
            G+   AL+LYKE+  R + P+  T+  L+      D  +   E L
Sbjct: 989  GDVASALKLYKEIKQRGLWPNMTTYCILIDAIFTNDISLAKGEVL 1033



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 124/462 (26%), Positives = 214/462 (46%), Gaps = 5/462 (1%)

Query: 207  DVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELL 266
            D    N I+     +G    A  ++  M +  + P   TY  +     + G+M  AL   
Sbjct: 587  DTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFY 646

Query: 267  WEMQGRGC-SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
              + G+G  SP  V Y   + G  R G+ + A     DM K GL     + N I+ GYS 
Sbjct: 647  GNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSR 706

Query: 326  KGLLVEALNLEEEMVTR-GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDII 384
             G + +A ++   M +   ++P+LATYNIL++G  K   +S   + +  M+R  + PD +
Sbjct: 707  MGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKL 766

Query: 385  SYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
            + ++L+ G+C+S  +     L  ++    +     T+N LI   C   ++  A  L   M
Sbjct: 767  TCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIM 826

Query: 445  INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
                I PD+ T+  +++   ++  +  +    +EML +G  PDR  Y   +    ++G  
Sbjct: 827  NLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHI 886

Query: 505  SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
              A++L++EM A G     +  + LV GL K G +EEA  +L  M+    IP   T+T++
Sbjct: 887  HGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTL 946

Query: 565  IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
            +H       L     L + M    +   ++ Y VLI    A G +  A   + E++ +G+
Sbjct: 947  MHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGL 1006

Query: 625  RPNVITYNALINGLCRLRRIDQAYG--LFIDMEEEGILPNKY 664
             PN+ TY  LI+ +     I  A G  L  D++E G++   +
Sbjct: 1007 WPNMTTYCILIDAIFT-NDISLAKGEVLLKDLQERGVISGHW 1047



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 178/362 (49%), Gaps = 2/362 (0%)

Query: 199  MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM-GEFGIKPSIVTYNTMLDSFCKEG 257
            M +NGL  D+   N I+      G   KA +++ MM     I PS+ TYN +L  + K+ 
Sbjct: 685  MEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKK 744

Query: 258  EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
             + +   L   M   G  P+ +T + LI GF ++  L+    L++ ML  G+ V   ++N
Sbjct: 745  NLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFN 804

Query: 318  PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
             +I  Y E   + +A +L   M    + P + T++ +I  L +   V ++     EML +
Sbjct: 805  MLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLER 864

Query: 378  NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
              IPD   Y  L+   CR G+I  AF L DE+ +  +    V  + L+ GL + G +E A
Sbjct: 865  GCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEA 924

Query: 438  QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
            + + + M+ + ++P + T+T +++  C+  +L  A +  + M    ++ D  AY   I+G
Sbjct: 925  KLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISG 984

Query: 498  ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG-SLEEANELLRKMVGDGFIP 556
                GD + A +L +E+  +G  P++ TY +L+  +     SL +   LL+ +   G I 
Sbjct: 985  LCADGDVASALKLYKEIKQRGLWPNMTTYCILIDAIFTNDISLAKGEVLLKDLQERGVIS 1044

Query: 557  DH 558
             H
Sbjct: 1045 GH 1046



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 7/160 (4%)

Query: 184  TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
             K   VE+  LV + MLR  L+P +     ++ +   N   V+A ++   M    +K  +
Sbjct: 916  AKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDV 975

Query: 244  VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITG-FSRNGELEQARGLIR 302
            + YN ++   C +G++  AL+L  E++ RG  PN  TY +LI   F+ +  L +   L++
Sbjct: 976  IAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILIDAIFTNDISLAKGEVLLK 1035

Query: 303  DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
            D+ + G+ +S H      CG   +GL++    L+     R
Sbjct: 1036 DLQERGV-ISGH-----WCGGIRQGLIIAMDRLKSMKANR 1069


>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 775

 Score =  268 bits (684), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 182/652 (27%), Positives = 317/652 (48%), Gaps = 44/652 (6%)

Query: 59  KELIISTVEEKPWAFCNNRWVSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQP 118
           K  II  +++  W   + ++V   F      P  + RVL  +++ P++AL+FFRW +T+ 
Sbjct: 68  KASIIKIIQQDQWN--DPKFV--RFIDSSLGPIWVSRVLVELKQDPKLALKFFRWAKTKF 123

Query: 119 GVKRDEFVFCTILEILIESGLLRSA-YWVVETVVCVNMHGILDV--LIGGGLSSCV-SIK 174
           G       +C ++ IL  + +   A +++ E +    +    DV  ++    + CV    
Sbjct: 124 GFCLTTESYCLLVHILFYARMYFDANFFLKELISSRRILPGFDVFEVLWSTRNVCVPGFG 183

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           + D L  ++ +  M+E+    F++M R  + P  ++CN  +               YR+ 
Sbjct: 184 VFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFL---------------YRL- 227

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
                               K G+   + +   +M G G + +  TYN++I    + G++
Sbjct: 228 -------------------AKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDM 268

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
             A+ L   M ++GL     +YN +I GY + GLL E+  L EEM   G  P + TYN L
Sbjct: 269 VTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNAL 328

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           I   CK+ ++  A H   EM    + P++++Y+TL+   C+   + +A     ++R   L
Sbjct: 329 INCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGL 388

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P   TY +LID  C+ G L  A +L + M+   +  +V+TYT +++G CK G +  A +
Sbjct: 389 SPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAED 448

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
            F  M++ G+ P+   YT  + G +K      A  L +E+  K   PDL+ Y  ++ GLC
Sbjct: 449 LFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLC 508

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
               LEE   ++ +M   G   + + YT  + A  + G      +L   M   G+  T+V
Sbjct: 509 SQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIV 568

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRP-NVITYNALINGLCRLRRIDQAYGLFID 653
           T+ VLI     +G +E A  YF+ M    ++P NV    ALI+GLC+   I+ A  LF +
Sbjct: 569 TFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDE 628

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           M+++ ++P+K  YT LI+ N    ++QEAL +   M +  +E D   +++L+
Sbjct: 629 MQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLV 680



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 138/461 (29%), Positives = 235/461 (50%), Gaps = 1/461 (0%)

Query: 261 EALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII 320
           +  E+LW  +   C P    ++ L + F   G LE+A      M +  +   A S N  +
Sbjct: 166 DVFEVLWSTRNV-CVPGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFL 224

Query: 321 CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
              ++ G    +     +MV  G+A ++ TYNI+I  +CK G +  A+  F +M +  + 
Sbjct: 225 YRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLT 284

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           PDI++YN+L+ GY + G + E+F LF+E++     P V+TYN LI+  C+Y  +  A   
Sbjct: 285 PDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHF 344

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
              M N G+ P+V+TY+ +++  CK   L  A +F  +M R GL P+ F YT+ I    K
Sbjct: 345 LHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCK 404

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
            G  S+A +L +EML      +++TY  L+ GLCK G + EA +L R M+  G  P+  T
Sbjct: 405 AGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKT 464

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           YT+++H  ++   +    +L   +  K + P L+ Y  +I    ++ +LE      SEM+
Sbjct: 465 YTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMK 524

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
             GIR N + Y   ++   +  +  +A  L  +M + G+     T+ +LI+  C  G  +
Sbjct: 525 ACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVE 584

Query: 681 EALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYL 721
           EA+  +  M D  ++P+       L+  L K+  + A + L
Sbjct: 585 EAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKL 625



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 132/441 (29%), Positives = 214/441 (48%), Gaps = 36/441 (8%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K  ++++   +F +M   G  PDV   N +I          KA      M   G+KP+
Sbjct: 297 YGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPN 356

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +VTY+T++D+ CKE  +Q+A++ L +M+  G SPN  TY  LI    + G L  A  L  
Sbjct: 357 VVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLAD 416

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +ML++ +  +  +Y  ++ G  ++G ++EA +L   M+  GV P L TY  L++G  K  
Sbjct: 417 EMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNK 476

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYC---------------------------- 394
           RV +A     E+  K + PD++ Y T+++G C                            
Sbjct: 477 RVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYT 536

Query: 395 -------RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
                  ++G   EA  L  E+    +  T+VT+  LIDGLC+ G +E A      M + 
Sbjct: 537 IRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADF 596

Query: 448 GILPD-VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSE 506
            + P+ V   T +++G CK   +  A++ F+EM  K + PD+ AYT  I G LK  D  E
Sbjct: 597 NLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQE 656

Query: 507 AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
           A  ++  M   G   DL  Y  LV GL +   +++A   L +M+G G +PD I    ++ 
Sbjct: 657 ALNIRSRMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLR 716

Query: 567 ASLEMGDLRRGRDLFNNMLRK 587
              E+G +    +L + +L+K
Sbjct: 717 KYYELGSIDEAIELHDELLKK 737


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  268 bits (684), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 160/517 (30%), Positives = 258/517 (49%), Gaps = 4/517 (0%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMGE 236
           +L+  + +   +E     F  +L++G   +    N+++K L D     +A ++  + M E
Sbjct: 99  ILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDILIKRMPE 158

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM---QGRGCSPNGVTYNVLITGFSRNGE 293
            G  P +V+YNT+L  FC E   +EALELL  M   QGR C PN V+Y  +I GF   G+
Sbjct: 159 LGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQ 218

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           +++A  L  +M+  G++ +  +Y  +I G  +  ++  A  + ++M+ +GV P   TYN 
Sbjct: 219 VDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNC 278

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           LI+G    G+  +      EM    + PD  +Y +LL   C +G   EA   FD +  + 
Sbjct: 279 LIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKG 338

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           + P V  Y  LI G    G L     L   M+  G+ PD   + I+     K   +  A 
Sbjct: 339 IKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAM 398

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
             FN+M ++GL PD   +   I    KLG   +A     +M+ +G  P++  +N LV+GL
Sbjct: 399 HIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGL 458

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
           C +   E+A E   +M+  G  PD + + +I+      G + + + L + M R G  P +
Sbjct: 459 CTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDV 518

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
           ++YT LI  H   GR++ A      M   G++P+  TYN L++G CR  RID AYG+F +
Sbjct: 519 ISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFRE 578

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           M   GI P   TY+ +++       + EA  LY  M+
Sbjct: 579 MLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMI 615



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 149/542 (27%), Positives = 270/542 (49%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           +  +  V++   +F +M+  G+ P+V     +I  L       +A  V++ M + G+KP 
Sbjct: 213 FFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPD 272

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             TYN ++  +   G+ +E + +L EM   G  P+  TY  L+     NG   +AR    
Sbjct: 273 NDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFD 332

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M++ G+K +   Y  +I GY+ KG L E  +L   MV  G++P    +NI+     K  
Sbjct: 333 SMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKA 392

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            + +A H F +M ++ + PD++++  L+   C+ G + +A L F+++ +  + P +  +N
Sbjct: 393 MIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFN 452

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           +L+ GLC     E A++    M+NQGI PDV+ +  ++   C  G +  A+   + M R 
Sbjct: 453 SLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERV 512

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G +PD  +YTT I G   +G   EA +  + ML+ G  PD  TYN L+HG C+ G +++A
Sbjct: 513 GTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDA 572

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             + R+M+ +G  P  +TY++I+H           ++L+ NM+  G    +  Y ++++ 
Sbjct: 573 YGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNG 632

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
            +    ++ AF  F  +  K  +  + T+N +I  L +  R + A  LF  +   G++P+
Sbjct: 633 LSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPD 692

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLE 722
            +TY ++       G  +E   L+  M      P+    +AL+ + L +     A  YL 
Sbjct: 693 VFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLS 752

Query: 723 SL 724
            L
Sbjct: 753 KL 754



 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 164/542 (30%), Positives = 268/542 (49%), Gaps = 8/542 (1%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF---GIKP 241
           K  +V++   VF +M+  G+ PD    N +I      G   K +EV RM+ E    G+KP
Sbjct: 250 KAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIG---KWKEVVRMLEEMSAHGLKP 306

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
              TY ++L+  C  G  +EA      M  +G  PN   Y +LI G++  G L +   L+
Sbjct: 307 DCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLL 366

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
             M++ GL    H +N I   Y++K ++ EA+++  +M  +G++P +  +  LI  LCK 
Sbjct: 367 NLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKL 426

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           GRV DA  +F +M+ + V P+I  +N+L+YG C      +A   + E+ ++ + P VV +
Sbjct: 427 GRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFF 486

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           NT++  LC  G +  AQ+L + M   G  PDVI+YT ++ G C +G +  A +  + ML 
Sbjct: 487 NTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLS 546

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
            GL+PD + Y T + G  + G   +AY +  EML  G  P ++TY+ ++HGL       E
Sbjct: 547 VGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSE 606

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A EL   M+  G   +   Y  I++   +   +     LF ++  K     + T+ ++I 
Sbjct: 607 AKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIG 666

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
           A    GR E A   F+ +   G+ P+V TY  +   L     +++   LF  ME+ G  P
Sbjct: 667 ALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTP 726

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKD-YKVHAVEY 720
           N      L+    + G+   A   Y   LD +      + +A+L+  L +D Y  HA   
Sbjct: 727 NSRMLNALVRRLLHRGDITRA-GAYLSKLDEKNFSLEASTTAMLISLLSRDEYHHHATSL 785

Query: 721 LE 722
            E
Sbjct: 786 PE 787



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 132/435 (30%), Positives = 226/435 (51%), Gaps = 4/435 (0%)

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
           +P+  TY++LI  F R G LE        +LK G +V+    N ++ G  +   L EA++
Sbjct: 91  TPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMD 150

Query: 335 -LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR---HRFFEMLRKNVIPDIISYNTLL 390
            L + M   G  P + +YN L+ G C   R  +A    H   +   ++  P+++SY T++
Sbjct: 151 ILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVI 210

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
            G+   G + +A+ LF E+  R + P VVTY T+IDGLC+   ++ A+ + + MI++G+ 
Sbjct: 211 NGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVK 270

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
           PD  TY  +++G   +G          EM   GL+PD + Y + +      G   EA   
Sbjct: 271 PDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFF 330

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
            + M+ KG  P++  Y +L+HG    G+L E ++LL  MV +G  PDH  +  I  A  +
Sbjct: 331 FDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAK 390

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
              +     +FN M ++GLSP +V +  LI A    GR++ A + F++M  +G+ PN+  
Sbjct: 391 KAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFV 450

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           +N+L+ GLC + + ++A   + +M  +GI P+   +  ++   C  G   +A RL   M 
Sbjct: 451 FNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLME 510

Query: 691 DREIEPDYCTHSALL 705
                PD  +++ L+
Sbjct: 511 RVGTRPDVISYTTLI 525



 Score =  222 bits (566), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 139/480 (28%), Positives = 233/480 (48%), Gaps = 6/480 (1%)

Query: 232 RMMGEFGIK--PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           RM+ E  IK  P + TY+ ++  FC+ G ++        +   G   N +  N L+ G  
Sbjct: 81  RMIRECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLC 140

Query: 290 RNGELEQARG-LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT---RGVA 345
               L +A   LI+ M +LG      SYN ++ G+  +    EAL L   M     R   
Sbjct: 141 DAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCP 200

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P + +Y  +I G    G+V  A + F EM+ + + P++++Y T++ G C++  +  A  +
Sbjct: 201 PNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGV 260

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
           F ++  + + P   TYN LI G    G  +   ++ E M   G+ PD  TY  ++N  C 
Sbjct: 261 FQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCN 320

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
            G    AR FF+ M+RKG++P+   Y   I G    G  SE + L   M+  G  PD   
Sbjct: 321 NGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHI 380

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           +N++     K   ++EA  +  KM   G  PD + + ++I A  ++G +      FN M+
Sbjct: 381 FNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMM 440

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
            +G++P +  +  L++      + E A  ++ EM  +GIRP+V+ +N ++  LC   ++ 
Sbjct: 441 NEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVM 500

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +A  L   ME  G  P+  +YT LI  +C  G   EA +    ML   ++PD  T++ LL
Sbjct: 501 KAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLL 560



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 136/495 (27%), Positives = 226/495 (45%), Gaps = 22/495 (4%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G+K D + + ++L  L  +G  R A +              D +I  G+    ++ I  +
Sbjct: 303 GLKPDCYTYGSLLNYLCNNGRCREARF------------FFDSMIRKGIKP--NVAIYGI 348

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  Y  K  + +   + N M+ NGL PD    N I           +A  ++  M + G
Sbjct: 349 LIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQG 408

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           + P +V +  ++D+ CK G + +A+    +M   G +PN   +N L+ G     + E+A+
Sbjct: 409 LSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAK 468

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
               +ML  G++     +N I+C    KG +++A  L + M   G  P + +Y  LI G 
Sbjct: 469 EFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGH 528

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C  GR+ +A      ML   + PD  +YNTLL+GYCR+G I +A+ +F E+    + P V
Sbjct: 529 CLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGV 588

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           VTY+T++ GL        A++L  NMI  G   ++  Y I++NG  K   +  A + F  
Sbjct: 589 VTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQS 648

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           +  K  Q +   +   I    K G   +A  L   + + G  PD+ TY ++   L + G 
Sbjct: 649 LCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGY 708

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           LEE ++L   M   G  P+     +++   L  GD+ R     + +  K  S    T  +
Sbjct: 709 LEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAM 768

Query: 599 LI--------HAHAA 605
           LI        H HA 
Sbjct: 769 LISLLSRDEYHHHAT 783



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 104/209 (49%), Gaps = 4/209 (1%)

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD- 579
           PDL TY++L+   C++G LE        ++  G+  ++I    ++    +   LR   D 
Sbjct: 92  PDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDI 151

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF---MYFSEMQVKGIRPNVITYNALIN 636
           L   M   G +P +V+Y  L+       R E A       ++ Q +   PNV++Y  +IN
Sbjct: 152 LIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVIN 211

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
           G     ++D+AY LF++M + GI PN  TYT +I+  C A     A  ++++M+D+ ++P
Sbjct: 212 GFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKP 271

Query: 697 DYCTHSALLLKQLDKDYKVHAVEYLESLT 725
           D  T++ L+   L        V  LE ++
Sbjct: 272 DNDTYNCLIHGYLSIGKWKEVVRMLEEMS 300


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  268 bits (684), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 153/468 (32%), Positives = 252/468 (53%), Gaps = 45/468 (9%)

Query: 213 RIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR 272
           R +K+LR  GF     E ++  G++G K S+++ N +L    KE E              
Sbjct: 97  RNLKILR--GF-----EAFKRAGDYGFKLSLISCNPLLSGLVKESE-------------- 135

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA 332
                             NG++E    + R+M+K  ++++  S+N ++ G  + G L  A
Sbjct: 136 ------------------NGDMEF---VYREMIKRKIELNVISFNIVVNGLCKVGKLNRA 174

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD---ARHRFFEMLRKNVIPDIISYNTL 389
            ++ E+M   GV+P + TYN LI G CK GR+     A     EM+ K + P+ ++YN L
Sbjct: 175 GDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNIL 234

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
           + G+C+  N+  A  +F E++ + L P VVTYN LI+GLC  G ++ A  L++ M++  +
Sbjct: 235 IDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDL 294

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
            P+V+T+ +++NG CK   ++ A   FN+M ++G+ P+   YTT I    K G   +A+ 
Sbjct: 295 EPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFA 354

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           L   M+ +G  P++ TYN L+ GLC+ G ++ A  L+ +MV      D +TY  +I +  
Sbjct: 355 LYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLC 414

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
           + G+ R+   L + M  KGL+P+ VTY  L+  +   G L  A +  + M+ KG + NV+
Sbjct: 415 KKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVV 474

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
           T+N LI G C   R++ A GL  +M E G++PN+ TY I+  E    G
Sbjct: 475 THNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKG 522



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 133/382 (34%), Positives = 222/382 (58%), Gaps = 3/382 (0%)

Query: 194 LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
            V+ +M++  +  +V + N ++  L   G   +A +V   M  +G+ P+++TYNT++D +
Sbjct: 141 FVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGY 200

Query: 254 CKEG---EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
           CK G   +M +A  +L EM  +G  PN VTYN+LI GF ++  +  A  +  +M + GL+
Sbjct: 201 CKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLR 260

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
            +  +YN +I G    G + EA+ L ++MV+  + P + T+N+LI G CK   V++A + 
Sbjct: 261 PNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINL 320

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
           F +M ++ V P+ ++Y TL+  YC+ G + +AF L++ +  R + P V TYN LI GLCR
Sbjct: 321 FNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCR 380

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
            GD++ A+ L   M+++ +  DV+TY I+++  CK G    A +  +EM  KGL P    
Sbjct: 381 KGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVT 440

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           Y T + G  + G+   A  ++  M  KG   +++T+NVL+ G C  G LE+AN LL +M+
Sbjct: 441 YNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEML 500

Query: 551 GDGFIPDHITYTSIIHASLEMG 572
             G +P+  TY  I    +E G
Sbjct: 501 ERGLVPNRTTYEIIKEEMMEKG 522



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 150/523 (28%), Positives = 270/523 (51%), Gaps = 8/523 (1%)

Query: 92  LLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVV 151
           LL ++LN   + P + LR+F W + +  +     +   IL  L  +         ++  V
Sbjct: 1   LLQQLLNSGAD-PELILRYFTWSQKEFKLSHSLELTFRILNSLAHTKKYSKIRSFLDKFV 59

Query: 152 CV----NMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPD 207
                 ++  I   +   G S CV+  + D+L+L + +   + +    F +    G    
Sbjct: 60  KYEKDYSVSAIFHAISMSGDSFCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLS 119

Query: 208 VKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLW 267
           + +CN ++  L     +     VYR M +  I+ +++++N +++  CK G++  A +++ 
Sbjct: 120 LISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIE 179

Query: 268 EMQGRGCSPNGVTYNVLITGF---SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYS 324
           +M+  G SPN +TYN LI G+    R G++ +A  ++++M+  G+  +  +YN +I G+ 
Sbjct: 180 DMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFC 239

Query: 325 EKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDII 384
           +   +  A+ +  EM  +G+ P + TYNILI GLC  G+V +A     +M+  ++ P+++
Sbjct: 240 KDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVV 299

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
           ++N L+ G+C++  + EA  LF+++  + + P  +TY TLID  C+ G +E A  L   M
Sbjct: 300 THNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMM 359

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
           I++GI P+V TY  ++ G C+ G++  AR   NEM+ K L  D   Y   I    K G++
Sbjct: 360 IDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGES 419

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
            +A +L +EM  KG  P  +TYN L+ G C+ G+L  A  +  +M   G   + +T+  +
Sbjct: 420 RKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVL 479

Query: 565 IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
           I      G L     L N ML +GL P   TY ++      +G
Sbjct: 480 IKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKG 522



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 138/448 (30%), Positives = 232/448 (51%), Gaps = 3/448 (0%)

Query: 269 MQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
           M G     N +  ++L+  F RN ++ +     +     G K+S  S NP++ G  ++  
Sbjct: 76  MSGDSFCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESE 135

Query: 329 LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNT 388
             +   +  EM+ R +   + ++NI++ GLCK G+++ A     +M    V P++I+YNT
Sbjct: 136 NGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNT 195

Query: 389 LLYGYCRSGNIGEAF---LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           L+ GYC+ G IG+ +    +  E+ ++ + P  VTYN LIDG C+  ++  A ++   M 
Sbjct: 196 LIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQ 255

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
            QG+ P+V+TY I++NG C  G +  A    ++M+   L+P+   +   I G  K    +
Sbjct: 256 RQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVN 315

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           EA  L  +M  +G  P+ +TY  L+   CK G +E+A  L   M+  G  P+  TY  +I
Sbjct: 316 EAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLI 375

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
                 GD++  R L N M+ K LS  +VTY +LI +   +G    A     EM  KG+ 
Sbjct: 376 AGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLN 435

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           P+ +TYN L++G CR   +  A  +   ME +G   N  T+ +LI   C  G  ++A  L
Sbjct: 436 PSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGL 495

Query: 686 YKEMLDREIEPDYCTHSALLLKQLDKDY 713
             EML+R + P+  T+  +  + ++K +
Sbjct: 496 LNEMLERGLVPNRTTYEIIKEEMMEKGF 523



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 114/329 (34%), Positives = 178/329 (54%), Gaps = 16/329 (4%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +  +M+  G+ P+    N +I     +     A  V+  M   G++P++VTYN +++  C
Sbjct: 215 ILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLC 274

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
            +G++ EA+ L  +M      PN VT+NVLI GF +N  + +A  L  DM K G+  +A 
Sbjct: 275 SDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAM 334

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +Y  +I  Y + G + +A  L   M+ RG+ P ++TYN LI GLC+ G V  AR    EM
Sbjct: 335 TYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEM 394

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           + K +  D+++YN L+   C+ G   +A  L DE+  + L P+ VTYNTL+DG CR G+L
Sbjct: 395 VSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNL 454

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
             A  ++  M  +G   +V+T+ +++ G C  G L  A    NEML +GL P+R  Y   
Sbjct: 455 RAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEI- 513

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
                          ++EEM+ KGF PD+
Sbjct: 514 ---------------IKEEMMEKGFVPDI 527



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 107/331 (32%), Positives = 168/331 (50%), Gaps = 18/331 (5%)

Query: 157 GILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK 216
            IL  ++  G+  C +    ++L+  + K   V   + VF +M R GL P+V   N +I 
Sbjct: 214 AILKEMVAKGI--CPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILIN 271

Query: 217 VLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSP 276
            L  +G   +A  +   M    ++P++VT+N +++ FCK   + EA+ L  +M+ +G  P
Sbjct: 272 GLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDP 331

Query: 277 NGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLE 336
           N +TY  LI  + ++G +E A  L   M+  G+     +YN +I G   KG +  A +L 
Sbjct: 332 NAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLM 391

Query: 337 EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS 396
            EMV++ ++  + TYNILI  LCK G    A     EM  K + P  ++YNTL+ GYCR 
Sbjct: 392 NEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCRE 451

Query: 397 GNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
           GN+  A ++   +  +     VVT+N LI G C  G LE A  L   M+ +G++P+  TY
Sbjct: 452 GNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTY 511

Query: 457 TIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
            I+                  EM+ KG  PD
Sbjct: 512 EIIK----------------EEMMEKGFVPD 526


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 164/550 (29%), Positives = 277/550 (50%), Gaps = 9/550 (1%)

Query: 168 SSCVS--IKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSV 225
           S C+   +  + L+  +     + E C L + +M+  G  P ++  + +I  L   G   
Sbjct: 188 SGCLGDYVTFMTLIEALSNHGKLDEACEL-YREMIERGYEPYLEVQDSLIFALCKAGKVD 246

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           +A E+Y+ +    +  S V YN+++D +CK G + + L+LL +M      P+  TYN+L+
Sbjct: 247 EANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILV 306

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            GFSR   L+ A  L + +   G K +A +Y  II G      L +A  +EE       A
Sbjct: 307 AGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQG------LYDAQRMEEAKAFFDEA 360

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
             + +Y  +I GL    R+ +A   F ++      P++++Y  ++ G  ++G I +    
Sbjct: 361 LDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKN 420

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
           F+++   + VPT  TY  +IDGLC+   L  A ++ E M+ +G +PD ITYT +++G  K
Sbjct: 421 FEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSK 480

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
              +  AR+  + ML KG +P    Y + + G  KL   +EA  +  +M  +G  P L  
Sbjct: 481 ASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFI 540

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           +  L+      G  EEA ++L +M   G  PD I YTS+I      G +   R +F++M+
Sbjct: 541 FTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMI 600

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
            KG +P  +TY  +I   +  G +E A      M   G+ P+   YN+L++G  +L R+D
Sbjct: 601 EKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVD 660

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           QA+G++  M   GI PN  T+ +L++     G    A  L+KEML+++  P       +L
Sbjct: 661 QAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTIL 720

Query: 706 LKQLDKDYKV 715
           +  L K  +V
Sbjct: 721 IDGLGKAGRV 730



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 144/464 (31%), Positives = 242/464 (52%), Gaps = 1/464 (0%)

Query: 207 DVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELL 266
           DV +   +IK L D+    +A E++  +   G  P++V Y  ++D   K G +++ L+  
Sbjct: 362 DVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNF 421

Query: 267 WEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEK 326
            +M G  C P   TY V+I G  +   L  A  +   M++ G      +Y  +I G+S+ 
Sbjct: 422 EDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKA 481

Query: 327 GLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISY 386
             + EA  L + M+T+G  PT  TY  +++G CK   +++A+    +M  +   P +  +
Sbjct: 482 SKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIF 541

Query: 387 NTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMIN 446
            +LL  Y   G   EA+ +  E+ +R   P V+ Y +LID L   G +  A+ + ++MI 
Sbjct: 542 TSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIE 601

Query: 447 QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSE 506
           +G  PD +TY  ++    K+GN+  A E    M + G+ PD FAY + + G +KL    +
Sbjct: 602 KGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQ 661

Query: 507 AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV-GDGFIPDHITYTSII 565
           A+ + + M+A G  P+ +T+NVL+HGL K G  + A  L ++M+  D   P  ++YT +I
Sbjct: 662 AFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILI 721

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
               + G +      F  M+ +G+ P   TYT LI++ A  GR+  A     +M   G+ 
Sbjct: 722 DGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVN 781

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL 669
           P+V  Y+ALI GL     +D A+ +F +M + G  PN+ TY +L
Sbjct: 782 PDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVL 825



 Score =  250 bits (638), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 156/534 (29%), Positives = 254/534 (47%), Gaps = 7/534 (1%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
            I+  ++L+  +++ + ++  L +F  +   G  P+      II+ L D      A+ + 
Sbjct: 298 DIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYD------AQRME 351

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
                F     +++Y T++        + EA EL  +++  GCSPN V Y  +I G  + 
Sbjct: 352 EAKAFFDEALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKA 411

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G +E       DM       +  +Y  +I G  +  +L +A  + E+MV +G  P   TY
Sbjct: 412 GRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITY 471

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
             LI G  K  ++ +AR     ML K   P  ++Y ++++G+C+   I EA  +  ++R 
Sbjct: 472 TTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRE 531

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           R   P +  + +L+      G  E A Q+   M  +G  PDVI YT +++     G +  
Sbjct: 532 RGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPE 591

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           AR  F+ M+ KG  PD   Y T I    K+G+   A  + E M   G  PD   YN L+ 
Sbjct: 592 ARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMD 651

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG-LS 590
           G  KL  +++A  +  +MV  G  P+ +T+  ++H   + G   R   LF  ML K  + 
Sbjct: 652 GYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVP 711

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           PTLV+YT+LI      GR+  AF  F EM  +GI P   TY +LI  L +  RI +A  L
Sbjct: 712 PTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKL 771

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
             DM + G+ P+   Y+ LI    ++     A  +++EM+ R   P+  T+  L
Sbjct: 772 VEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVL 825



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 150/514 (29%), Positives = 248/514 (48%), Gaps = 15/514 (2%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR-EVYRMMGEFGIK---PSIVTYNTMLD 251
           FN M+ NG  PDV     +I     +GF    + +V  M+    +K   P +  Y +++ 
Sbjct: 78  FNSMIDNGCEPDVIAFTTLI-----HGFCKAGQPQVGHMLLNQALKRFRPDVFLYTSVIH 132

Query: 252 SFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKV 311
            +CK G++    ++L EM   GC P+   Y VLI    + G +++A  L   M K G   
Sbjct: 133 GYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLG 192

Query: 312 SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRF 371
              ++  +I   S  G L EA  L  EM+ RG  P L   + LI+ LCK G+V +A   +
Sbjct: 193 DYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIY 252

Query: 372 FEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY 431
             ++ K V    ++YN+L+ GYC+ G + +   L  ++   +  P + TYN L+ G  R 
Sbjct: 253 QTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRA 312

Query: 432 GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAY 491
             L+ A +L + + + G  P+  TYT ++ G      +  A+ FF+E L      D  +Y
Sbjct: 313 NRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEAL------DVISY 366

Query: 492 TTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
           TT I G        EA  L E++   G  P+++ Y  ++ GL K G +E+  +    M G
Sbjct: 367 TTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSG 426

Query: 552 DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLEL 611
              +P   TYT +I    +   L     +F  M++KG  P  +TYT LI   +   +++ 
Sbjct: 427 SSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDE 486

Query: 612 AFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
           A      M  KG  P  +TY ++++G C+L  I++A  +   M E G  P  + +T L++
Sbjct: 487 ARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLS 546

Query: 672 ENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
              + G  +EA ++  EM  R   PD   +++L+
Sbjct: 547 YYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLI 580



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 162/572 (28%), Positives = 257/572 (44%), Gaps = 42/572 (7%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +E+ L    +M   GL+PDV NCN ++  L       KA E++  M   G +P+IV+YNT
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++       +M EA +    M   GC P+ + +  LI GF + G+ +    L+   LK  
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR- 119

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            +     Y  +I GY + G L     + EEM+  G  P  A Y +LI  LCK GRV +A 
Sbjct: 120 FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179

Query: 369 HRFFEMLRKNVIPDIISY-----------------------------------NTLLYGY 393
             F  M +   + D +++                                   ++L++  
Sbjct: 180 ELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFAL 239

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
           C++G + EA  ++  + ++ +  + V YN+L+DG C+ G ++   +L   M+     PD+
Sbjct: 240 CKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDI 299

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
            TY I+V G  +   L  A E F  +   G +P+   YTT I G        EA    +E
Sbjct: 300 QTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDE 359

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
            L      D+I+Y  ++ GL     ++EA EL  K+   G  P+ + YT++I   L+ G 
Sbjct: 360 AL------DVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGR 413

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
           +  G   F +M      PT  TYTV+I        L  A   F +M  KG  P+ ITY  
Sbjct: 414 IEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTT 473

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
           LI+G  +  ++D+A  L   M  +G  P   TY  +++  C      EA  +  +M +R 
Sbjct: 474 LIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERG 533

Query: 694 IEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
            EP     ++LL   L K     A + L  +T
Sbjct: 534 CEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMT 565



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 138/471 (29%), Positives = 236/471 (50%), Gaps = 9/471 (1%)

Query: 186 KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVT 245
           K + E C L F K+   G  P+V     +I  L   G      + +  M      P+  T
Sbjct: 377 KRIDEACEL-FEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTT 435

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           Y  ++D  CK   + +A ++  +M  +GC P+ +TY  LI GFS+  ++++AR L+  ML
Sbjct: 436 YTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVML 495

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
             G + +A +Y  I+ G+ +  ++ EA  +  +M  RG  P L  +  L+      GR  
Sbjct: 496 TKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAE 555

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
           +A     EM  +   PD+I Y +L+     +G + EA  +FD +  +   P  +TY T+I
Sbjct: 556 EAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTII 615

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
               + G++E A ++ E M   G+ PD   Y  +++G  K+  +  A   ++ M+  G++
Sbjct: 616 QNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIK 675

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG-FPPDLITYNVLVHGLCKLGSLEEANE 544
           P+   +   + G  K G T  A+ L +EML K   PP L++Y +L+ GL K G + EA  
Sbjct: 676 PNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFS 735

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
             ++M+  G IP+  TYTS+I++  + G +   + L  +M++ G++P +  Y+ LI    
Sbjct: 736 QFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLI 795

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
               ++ A+  F EM  +G  PN +TY         LRR  +A G  +D+E
Sbjct: 796 DSSMVDTAWDVFQEMMKRGCAPNEVTYKV-------LRRGFRAAGRALDLE 839



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 162/308 (52%), Gaps = 4/308 (1%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           I   LL  Y  K   E+   V  +M   G  PDV     +I +L   G   +AR V+  M
Sbjct: 540 IFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSM 599

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
            E G  P  +TY T++ +F K G ++ A E+L  M   G  P+   YN L+ G+ +   +
Sbjct: 600 IEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERV 659

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG-VAPTLATYNI 353
           +QA G+   M+  G+K +A ++N ++ G  + G    A +L +EM+ +  V PTL +Y I
Sbjct: 660 DQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTI 719

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           LI GL K GRVS+A  +F EM+ + +IP+  +Y +L+Y   ++G I EA  L +++    
Sbjct: 720 LIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLG 779

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG---NLS 470
           + P V  Y+ LI GL     ++ A  + + M+ +G  P+ +TY ++  G    G   +L 
Sbjct: 780 VNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLE 839

Query: 471 MAREFFNE 478
             ++ F++
Sbjct: 840 AVKQHFSQ 847


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 159/504 (31%), Positives = 258/504 (51%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V+  +  FN+ML     P +   N+I+           A  +   +   GI+P ++T N 
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++ FC  G++     +L ++  RG  P+ +T+  LI G    G++ +A      +L  G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG 159

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           +K    SY  +I G  + G    A+ L  ++  R   P +  YN +I  LCK+  VS+A 
Sbjct: 160 IKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAY 219

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F EM  K +  D+++Y TL+YG+C +  + EA  L +E+  + + P V TYN L+D L
Sbjct: 220 GLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G ++ A+ +   M+   + PDVITY+ +++G   +  L  A+  FN M   G+ PD 
Sbjct: 280 CKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDV 339

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
            +YT  I G  K     EA  L +EM  K   P ++TY+ L+ GLCK G +    +L+ +
Sbjct: 340 HSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDE 399

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M   G   + ITY S+I    + G L R   LFN M  +G+ P   T+T+L+      GR
Sbjct: 400 MRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGR 459

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           L+ A   F ++  KG   +V  YN +ING C+   +++A  +   MEE G +PN  T+ I
Sbjct: 460 LKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDI 519

Query: 669 LINENCNAGNWQEALRLYKEMLDR 692
           +IN         +A +L ++M+ R
Sbjct: 520 IINALFKKDENDKAEKLLRQMICR 543



 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 140/484 (28%), Positives = 246/484 (50%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P I+ +N +LDSF K      A+ L   ++ +G  P+ +T N+LI  F   G++     +
Sbjct: 57  PPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  +LK G +    ++  +I G   KG + +AL+  ++++ +G+     +Y  LI G+CK
Sbjct: 117 LAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCK 176

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G    A     ++  +   P++  YNT++   C+   + EA+ LF E+ ++ +   VVT
Sbjct: 177 IGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVT 236

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y TLI G C    L+ A  L   M+ + I P+V TY I+V+  CK G +  A+     ML
Sbjct: 237 YTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVML 296

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           +  ++PD   Y+T + G   + +  +A  +   M   G  PD+ +Y +L++G CK   ++
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVD 356

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA  L ++M     +P  +TY+S+I    + G +    DL + M  +G+   ++TY  LI
Sbjct: 357 EALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLI 416

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                 G L+ A   F++M+ +GIRP   T+  L++GLC+  R+  A   F D+  +G  
Sbjct: 417 DGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYH 476

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
            + Y Y ++IN +C  G  +EAL +  +M +    P+  T   ++     KD    A + 
Sbjct: 477 LDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKL 536

Query: 721 LESL 724
           L  +
Sbjct: 537 LRQM 540



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 196/410 (47%), Gaps = 35/410 (8%)

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
           +A++    M+     P +  +N ++    K    S A      +  K + PD+I+ N L+
Sbjct: 42  DAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILI 101

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
             +C  G I   F +  ++  R   P  +T+ TLI GLC  G +  A    + ++ QGI 
Sbjct: 102 NCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIK 161

Query: 451 PDVITYTIMVNGSCKMGN-----------------------------------LSMAREF 475
            D ++Y  ++NG CK+G+                                   +S A   
Sbjct: 162 FDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGL 221

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
           F+EM  KG+  D   YTT I G        EA  L  EM+ K   P++ TYN+LV  LCK
Sbjct: 222 FSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCK 281

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
            G ++EA  +L  M+     PD ITY++++     + +L++ + +FN M   G++P + +
Sbjct: 282 EGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHS 341

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           YT+LI+       ++ A   F EM  K + P ++TY++LI+GLC+  RI   + L  +M 
Sbjct: 342 YTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMR 401

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           + GI  N  TY  LI+  C  G+   A+ L+ +M D+ I P   T + LL
Sbjct: 402 DRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILL 451



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 178/342 (52%)

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           V DA  +F  ML     P II +N +L  + +  +   A  L   L  + + P ++T N 
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           LI+  C  G +     +   ++ +G  P  IT+T ++ G C  G ++ A  F +++L +G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG 159

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           ++ D+ +Y T I G  K+GDT  A +L  ++  +   P++  YN ++  LCK   + EA 
Sbjct: 160 IKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAY 219

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
            L  +M   G   D +TYT++I+       L+    L N M+ K ++P + TY +L+ A 
Sbjct: 220 GLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
              G+++ A    + M    ++P+VITY+ L++G   +  + +A  +F  M   G+ P+ 
Sbjct: 280 CKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDV 339

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           ++YTILIN  C      EAL L+KEM  + + P   T+S+L+
Sbjct: 340 HSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLI 381


>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
          Length = 559

 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 150/463 (32%), Positives = 242/463 (52%), Gaps = 29/463 (6%)

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLW-----------------EMQGRGCSPNGVTYNVL 284
           SI +Y TM    C    + EA  LL                   ++ RG   + + ++VL
Sbjct: 102 SIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVL 161

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGY-----SEKGLLVEALNLEEEM 339
           +  ++ +G    A    R + K  L++  HS     CGY      +  L   A    EE+
Sbjct: 162 MNAYTDSGYFSDAIQCFRLVRKHNLQIPFHS-----CGYLFDRLMKLNLTSPAWAFYEEI 216

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
           +  G  P +  +N+L++ LCK  ++++A+  F E+ ++ + P ++S+NTL+ GYC+SGN+
Sbjct: 217 LDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNL 276

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
            + F L   +    + P V TY+ LI+GLC+ G L+ A +L   M ++G++P+ +T+T +
Sbjct: 277 DQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTL 336

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           +NG C  G   +  E + +MLRKG++PD   Y T I G  K+GD  EA +L  EM  +G 
Sbjct: 337 INGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGL 396

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
            PD  TY +L+ G CK G LE A E+ ++MV +G   D++ +T++I      G +     
Sbjct: 397 KPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAER 456

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
               ML  G+ P   TYT++IH    +G ++  F    EMQ  G  P V+TYN L+NGLC
Sbjct: 457 TLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLC 516

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
           +  ++  A  L   M   G++P+  TY IL+     A  W++ 
Sbjct: 517 KQGQMKNANMLLDAMLNLGVVPDDITYNILLERTLQA--WKQG 557



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 153/477 (32%), Positives = 240/477 (50%), Gaps = 3/477 (0%)

Query: 97  LNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMH 156
           LN     P   L FF+W+ TQ   +     +CT+   L    +L  A  +++ VV     
Sbjct: 76  LNPHSLSPPSLLSFFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGK 135

Query: 157 GILDVLIGGGL---SSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNR 213
                +    L    +  S  +  +L+  YT        +  F  + ++ L     +C  
Sbjct: 136 NSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGY 195

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
           +   L     +  A   Y  + + G  P +  +N ++   CKE ++ EA  L  E+  RG
Sbjct: 196 LFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRG 255

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
             P  V++N LI G+ ++G L+Q   L R M++  +     +Y+ +I G  ++G L +A 
Sbjct: 256 LRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDAN 315

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
            L  EM  RG+ P   T+  LI G C  GR       + +MLRK V PD+I+YNTL+ G 
Sbjct: 316 KLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGL 375

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
           C+ G++ EA  L  E+  R L P   TY  LIDG C+ GDLE A ++++ M+ +GI  D 
Sbjct: 376 CKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDN 435

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
           + +T +++G C+ G +  A     EML  G++PD   YT  I G  K GD    ++L +E
Sbjct: 436 VAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKE 495

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
           M   G  P ++TYNVL++GLCK G ++ AN LL  M+  G +PD ITY  ++  +L+
Sbjct: 496 MQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLERTLQ 552


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 145/484 (29%), Positives = 257/484 (53%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PS V +N +L S  K       L L  +M   G  PN  T ++LI  F     +  A  +
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  +LKLG +    ++  +I G   +G + EAL+L ++M+  G  P + TY  LI GLCK
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 178

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G  S A      M++KN  P++ +YNT++   C+   + EAF LF E+ ++ + P + T
Sbjct: 179 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFT 238

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YN+LI  LC   + +    L   M++  I+PDV+++  +V+  CK G ++ A +  ++M+
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMI 298

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           ++G++P+   YT  + G   L +  EA ++ + M+ KG  P++I+YN L++G CK+  ++
Sbjct: 299 QRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRID 358

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           +A  L  +M     IPD +TY+++IH    +  L+    LF+ M+     P LVTY +L+
Sbjct: 359 KAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILL 418

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                   L  A      ++   + P++   N  I+G+CR   ++ A  LF ++  +G+ 
Sbjct: 419 DYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQ 478

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
           P+ +TY+I+IN  C  G   EA +L++EM +     + C ++ +    L  +    A++ 
Sbjct: 479 PDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQL 538

Query: 721 LESL 724
           L+ +
Sbjct: 539 LQEM 542



 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 156/517 (30%), Positives = 257/517 (49%), Gaps = 1/517 (0%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
           FN+MLR    P   + N+++  +           +   M  FGI P+I T + +++SFC 
Sbjct: 49  FNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCH 108

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
              +  A  +L ++   G  P+  T+  LI G    G++ +A  L   M+  G +    +
Sbjct: 109 LNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVT 168

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           Y  +I G  + G    A+ L   MV +   P +  YN +I  LCK  +V++A + F EM+
Sbjct: 169 YGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMV 228

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
            K + PDI +YN+L++  C          L +E+    ++P VV++NT++D LC+ G + 
Sbjct: 229 TKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVT 288

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            A  + + MI +G+ P+V+TYT +++G C +  +  A + F+ M+ KG  P+  +Y T I
Sbjct: 289 EAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLI 348

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
            G  K+    +A  L  EM  +   PD +TY+ L+HGLC +  L++A  L  +MV    I
Sbjct: 349 NGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQI 408

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           P+ +TY  ++    +   L     L   +    L P +    + I      G LE A   
Sbjct: 409 PNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDL 468

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
           FS +  KG++P+V TY+ +INGLCR   +D+A  LF +M+E G   N   Y  +      
Sbjct: 469 FSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLR 528

Query: 676 AGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
                 A++L +EM+ R    D  T + L +K L  D
Sbjct: 529 NNETSRAIQLLQEMVARGFSADASTMT-LFVKMLSDD 564



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/366 (33%), Positives = 198/366 (54%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   V +   +F++M+  G+ PD+   N +I  L +         +   M +  I P +V
Sbjct: 213 KDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVV 272

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           ++NT++D+ CKEG++ EA +++ +M  RG  PN VTY  L+ G     E+++A  +   M
Sbjct: 273 SFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTM 332

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           +  G   +  SYN +I GY +   + +A+ L  EM  + + P   TY+ LI+GLC   R+
Sbjct: 333 VCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERL 392

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            DA   F EM+  + IP++++Y  LL   C++  + EA  L   +   NL P +   N  
Sbjct: 393 QDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIA 452

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           IDG+CR G+LE A+ L  N+ ++G+ PDV TY+IM+NG C+ G L  A + F EM   G 
Sbjct: 453 IDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGC 512

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
             +   Y T   G L+  +TS A +L +EM+A+GF  D  T  + V  L   G  +   +
Sbjct: 513 TLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQ 572

Query: 545 LLRKMV 550
           +LR+ V
Sbjct: 573 ILREFV 578



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 130/442 (29%), Positives = 214/442 (48%), Gaps = 37/442 (8%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMGEFGIKPSIVTYNTMLDSF 253
           V  K+L+ G  PD      +I+ +   G   +A  ++ +M+GE G +P +VTY T+++  
Sbjct: 118 VLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGE-GFRPDVVTYGTLINGL 176

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           CK G    A+ LL  M  + C PN   YN +I    ++ ++ +A  L  +M+  G+    
Sbjct: 177 CKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDI 236

Query: 314 HSYNPII---CGYSE--------------------------------KGLLVEALNLEEE 338
            +YN +I   C   E                                +G + EA ++ ++
Sbjct: 237 FTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDK 296

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
           M+ RGV P + TY  L+ G C    + +A   F  M+ K  +P++ISYNTL+ GYC+   
Sbjct: 297 MIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQR 356

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           I +A  LF E+  + L+P  VTY+TLI GLC    L+ A  L   M+    +P+++TY I
Sbjct: 357 IDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRI 416

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           +++  CK   L+ A      +    L PD       I G  + G+   A  L   + +KG
Sbjct: 417 LLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKG 476

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
             PD+ TY+++++GLC+ G L+EA++L R+M  +G   +   Y +I    L   +  R  
Sbjct: 477 LQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAI 536

Query: 579 DLFNNMLRKGLSPTLVTYTVLI 600
            L   M+ +G S    T T+ +
Sbjct: 537 QLLQEMVARGFSADASTMTLFV 558



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 75/151 (49%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +LL    K   + + + +   +  + L PD++  N  I  +   G    AR+++  +   
Sbjct: 416 ILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSK 475

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G++P + TY+ M++  C+ G + EA +L  EM   GC+ NG  YN +  GF RN E  +A
Sbjct: 476 GLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRA 535

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
             L+++M+  G    A +    +   S+ GL
Sbjct: 536 IQLLQEMVARGFSADASTMTLFVKMLSDDGL 566



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 56/112 (50%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F+ +   GL PDV   + +I  L   G   +A +++R M E G   +   YNT+   F 
Sbjct: 468 LFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFL 527

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
           +  E   A++LL EM  RG S +  T  + +   S +G  +  + ++R+ ++
Sbjct: 528 RNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILREFVQ 579


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 175/576 (30%), Positives = 291/576 (50%), Gaps = 32/576 (5%)

Query: 172  SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
            +++  ++++ +  K     +   +F+ +   G +PDV   N +I VL   G   K   + 
Sbjct: 426  NLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAII 485

Query: 232  RMMGEFGIK------------------------PSI-------VTYNTMLDSFCKEGEMQ 260
            + M E G +                        PS+       +TYNT++ +F   G + 
Sbjct: 486  KEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVD 545

Query: 261  EALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII 320
            EA++LL  M+   C P  VTY  L+ G  + G L++A  L+R+M K G + S  +Y+ ++
Sbjct: 546  EAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLM 605

Query: 321  CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
              + ++    E+L+L +EMV +G    ++TY+++I  LCK   V  A   F  M  + + 
Sbjct: 606  ASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGME 665

Query: 381  PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
            P + +Y TLL    +   I  A  +F+EL+  +LVP    YN +++GL +   ++ A +L
Sbjct: 666  PLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKL 725

Query: 441  KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
             ++M NQ ILPD+ TYT +++G  K G L  A   F +M  +G +PD  AYT+ +    K
Sbjct: 726  VDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGK 785

Query: 501  LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
             G  S A  +   M  K   PD++TY+ L+  L K G +EEA       +  G  P+   
Sbjct: 786  GGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGV 845

Query: 561  YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
            Y+S+I +  + G + R  +LF  M R+   P +VTY  L+   A  GRL +A     EM+
Sbjct: 846  YSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEME 905

Query: 621  VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
              G  P+++TYN LI+G+ ++  +D+A   F  M+E+GI+P+  T+T LI          
Sbjct: 906  KVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLL 965

Query: 681  EALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVH 716
            EA  L+  M +    P   T++ +L+  L +  KVH
Sbjct: 966  EACELFDSMEEEGYNPSVVTYN-VLIDILGRAGKVH 1000



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 161/561 (28%), Positives = 279/561 (49%), Gaps = 31/561 (5%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F +M   GL+P+++  N +I VL   G   +A +++  + E G  P + TYNT++D   
Sbjct: 414 LFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLG 473

Query: 255 KEGEMQEALELLWEMQGRG--C-----------------------------SPNGVTYNV 283
           K G+M + L ++ EM  +G  C                             S   +TYN 
Sbjct: 474 KGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNT 533

Query: 284 LITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG 343
           L++ F  NG +++A  L+  M K     +  +Y  ++ G  + G L EA++L  EM  +G
Sbjct: 534 LMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQG 593

Query: 344 VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF 403
             P++ TY+ L+    K  +  ++   F EM+RK  + D+ +Y+ ++   C+S ++ +A 
Sbjct: 594 CEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQAL 653

Query: 404 LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
            +F  ++   + P +  Y TL+  L +   ++ A Q+   +    ++PD   Y IMVNG 
Sbjct: 654 DVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGL 713

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
            K   +  A +  + M  + + PD F YT+ + G  K G   EA+ +  +M  +G  PD+
Sbjct: 714 VKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDV 773

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
           + Y  L+  L K G L  A  + R M     +PD +TY+S+I +  + G +      F N
Sbjct: 774 VAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFEN 833

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
            + KG +P +  Y+ LI +   +G ++ A   F EMQ +   PN++TYN L++GL +  R
Sbjct: 834 SISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGR 893

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSA 703
           ++ A  L  +ME+ G +P+  TY ILI+     G   EA   +K M ++ I PD  T ++
Sbjct: 894 LNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTS 953

Query: 704 LLLKQLDKDYKVHAVEYLESL 724
           L+      D  + A E  +S+
Sbjct: 954 LIESLGKVDKLLEACELFDSM 974



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 159/508 (31%), Positives = 262/508 (51%)

Query: 212  NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
            N ++     NG   +A ++  +M +    P++VTY T++D   K G + EA+ LL EM+ 
Sbjct: 532  NTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEK 591

Query: 272  RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
            +GC P+ VTY+ L+  F +  + E++  L  +M++ G      +Y+ +I    +   + +
Sbjct: 592  QGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQ 651

Query: 332  ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
            AL++   M   G+ P L  Y  L+  L K  ++  A   F E+   +++PD   YN ++ 
Sbjct: 652  ALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVN 711

Query: 392  GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
            G  +S  + EA  L D ++++N++P + TY +L+DGL + G LE A  +   M  +G  P
Sbjct: 712  GLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEP 771

Query: 452  DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
            DV+ YT +++   K G LS A   F  M +K   PD   Y++ I    K G   EAY   
Sbjct: 772  DVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFF 831

Query: 512  EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
            E  ++KG  P++  Y+ L+    K G ++ A EL  +M      P+ +TY +++    + 
Sbjct: 832  ENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKA 891

Query: 572  GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
            G L     L   M + G  P LVTY +LI      G ++ A  YF  M+ KGI P+VIT+
Sbjct: 892  GRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITF 951

Query: 632  NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
             +LI  L ++ ++ +A  LF  MEEEG  P+  TY +LI+    AG   EA  ++ EM  
Sbjct: 952  TSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKV 1011

Query: 692  REIEPDYCTHSALLLKQLDKDYKVHAVE 719
            +   PD  T   +      ++ + HA+E
Sbjct: 1012 KGCMPDGITIGIMKRILSVREQQFHALE 1039



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 165/596 (27%), Positives = 296/596 (49%), Gaps = 21/596 (3%)

Query: 92   LLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVV---- 147
            +++ VL +   +P  A + F  ++ Q G   D F + T++++L + G +     ++    
Sbjct: 432  IMISVLGKAGRQPE-AWQLFHDLKEQ-GAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMV 489

Query: 148  ----ETVVCVNMHGILDVLIGG----------GLSSCVSIKILDLLLLIYTKKSMVEQCL 193
                E ++  + +   +  I G          G  S   I   + L+  +     V++ +
Sbjct: 490  EKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEI-TYNTLMSAFIHNGHVDEAV 548

Query: 194  LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
             +   M ++  +P V     ++  L   G   +A  + R M + G +PS+VTY++++ SF
Sbjct: 549  KLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASF 608

Query: 254  CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
             K  + +E+L L  EM  +GC  +  TY+++I    ++ +++QA  +   M + G++   
Sbjct: 609  YKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLL 668

Query: 314  HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
             +Y  ++    +   +  AL +  E+    + P    YNI++ GL K  RV +A      
Sbjct: 669  GNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDS 728

Query: 374  MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
            M  +N++PD+ +Y +LL G  +SG + EAF +F ++      P VV Y +L+D L + G 
Sbjct: 729  MKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGK 788

Query: 434  LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
            L  A  +   M  +  +PDV+TY+ +++   K G +  A  FF   + KG  P+   Y++
Sbjct: 789  LSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSS 848

Query: 494  QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
             I    K G    A  L EEM  +  PP+++TYN L+ GL K G L  A +LL +M   G
Sbjct: 849  LIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVG 908

Query: 554  FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
             +PD +TY  +I    +MG +      F  M  KG+ P ++T+T LI +     +L  A 
Sbjct: 909  CVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEAC 968

Query: 614  MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL 669
              F  M+ +G  P+V+TYN LI+ L R  ++ +A  +F +M+ +G +P+  T  I+
Sbjct: 969  ELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIM 1024



 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 158/566 (27%), Positives = 268/566 (47%), Gaps = 31/566 (5%)

Query: 171 VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV 230
           +S+ +L  LL  +   + V   L +FN+M   G  P     N ++++L   GF   A  V
Sbjct: 215 ISMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIV 274

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
           +  +G+F I+P   T+   + SF + G +  A E + EM   G  P   T+ VLI    +
Sbjct: 275 FGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVK 334

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
           +G +++A      M  L    +  +Y  ++ G ++ G L EA  +  EM     +P    
Sbjct: 335 SGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIA 394

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           YN LI GL K G    A   F EM  + ++P++ +YN ++    ++G   EA+ LF +L+
Sbjct: 395 YNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLK 454

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG----ILPDV------------- 453
            +  VP V TYNTLID L + G ++    + + M+ +G    I  D              
Sbjct: 455 EQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADR 514

Query: 454 --------------ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
                         ITY  +++     G++  A +    M +    P    YTT + G  
Sbjct: 515 TVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLG 574

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           K G   EA  L  EM  +G  P ++TY+ L+    K    EE+  L  +MV  G + D  
Sbjct: 575 KAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVS 634

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
           TY+ +I+   +  D+ +  D+F  M  +G+ P L  Y  L+ +     +++ A   F+E+
Sbjct: 635 TYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNEL 694

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
           Q   + P+   YN ++NGL +  R+D+A  L   M+ + ILP+ +TYT L++    +G  
Sbjct: 695 QESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRL 754

Query: 680 QEALRLYKEMLDREIEPDYCTHSALL 705
           +EA  ++ +M +   EPD   +++L+
Sbjct: 755 EEAFNMFTKMTEEGHEPDVVAYTSLM 780



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 144/543 (26%), Positives = 251/543 (46%), Gaps = 66/543 (12%)

Query: 229 EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
           ++   M + G + S+    ++L +F     +  ALE+  +M+  GC+P+   YN ++   
Sbjct: 203 QILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELL 262

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
            + G    A  +   + +  ++  A ++   +  ++  G L  A    +EM+  G+ P +
Sbjct: 263 VKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGV 322

Query: 349 ATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDE 408
            T+ +LI  L K G + +A   F  M      P++++Y TL+ G  ++G + EA  +F E
Sbjct: 323 HTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVE 382

Query: 409 LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
           ++  N  P  + YNTLIDGL + G+ ++A  L + M ++G++P++ TY IM++   K G 
Sbjct: 383 MKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGR 442

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP-------- 520
              A + F+++  +G  PD F Y T I    K G   +   + +EM+ KG          
Sbjct: 443 QPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSN 502

Query: 521 ----------------PDL-------ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
                           P L       ITYN L+      G ++EA +LL  M     IP 
Sbjct: 503 AGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPT 562

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
            +TYT+++    + G L     L   M ++G  P++VTY+ L+ +   R + E +   F 
Sbjct: 563 VVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFD 622

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG------------------- 658
           EM  KG   +V TY+ +IN LC+   +DQA  +F  M+EEG                   
Sbjct: 623 EMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDE 682

Query: 659 ----------------ILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
                           ++P+ + Y I++N    +    EA +L   M ++ I PD  T++
Sbjct: 683 KIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYT 742

Query: 703 ALL 705
           +LL
Sbjct: 743 SLL 745



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 129/470 (27%), Positives = 211/470 (44%), Gaps = 31/470 (6%)

Query: 267 WEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEK 326
           W  Q  G S    TY ++I   +   E +    ++  M K G ++S H    ++  +   
Sbjct: 171 WAGQQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGST 230

Query: 327 GLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISY 386
             +  AL +  +M + G  P+   YN ++  L K G    A   F ++ +  + PD  ++
Sbjct: 231 NNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTF 290

Query: 387 NTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMIN 446
              ++ + RSG +  A     E+    + P V T+  LID L + G+++ A +    M N
Sbjct: 291 RIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKN 350

Query: 447 QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSE 506
               P+V+TYT +VNG  K G L  A E F EM      PD  AY T I G  K G+   
Sbjct: 351 LRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADM 410

Query: 507 AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
           A  L +EM  +G  P+L TYN+++  L K G   EA +L   +   G +PD  TY ++I 
Sbjct: 411 ACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLID 470

Query: 567 ASLEMGDLRRGRDLFNNMLRKGLS------------------------PTL-------VT 595
              + G + +   +   M+ KG                          P+L       +T
Sbjct: 471 VLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEIT 530

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           Y  L+ A    G ++ A      M+     P V+TY  L++GL +  R+D+A  L  +ME
Sbjct: 531 YNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREME 590

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           ++G  P+  TY+ L+         +E+L L+ EM+ +    D  T+S ++
Sbjct: 591 KQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVI 640


>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial [Vitis vinifera]
          Length = 817

 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 182/710 (25%), Positives = 333/710 (46%), Gaps = 102/710 (14%)

Query: 93  LVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIE-------SGLLRSAYW 145
           +V +   ++ +P +A  FF  ++ + G + +   +  ++ +L           LL     
Sbjct: 66  VVEIFYNLKNEPNLAWSFFTQLK-ESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIVG 124

Query: 146 VVETVVCVNMHGILDVL-----IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKML 200
             E+V+  ++  + DVL        G  S V I +LD+L+  Y +  M ++ +    +  
Sbjct: 125 SKESVLGFDITALFDVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTK 184

Query: 201 RNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQ 260
           R G +P + +CN ++  L ++G    A  +YR +   G+ P+  TY   + + C++G  +
Sbjct: 185 RRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFE 244

Query: 261 EALELLWEMQGRGCSPNGVT-----------------------------------YNVLI 285
           EA+++  EM+  G +PN VT                                   Y  +I
Sbjct: 245 EAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVI 304

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            GF    +L++A  +  DM+  G+    + Y  +I  Y + G L++A+ L  +MV+ G+ 
Sbjct: 305 RGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIK 364

Query: 346 PTLAT-----------------------------------YNILIYGLCKWGRVSDARHR 370
                                                   YNI++  LCK G+V +A   
Sbjct: 365 TNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVEL 424

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
             EM  + +  D++ Y TL+ GYC  G + +A  +F+E++ R + P +VTYN L+ G  R
Sbjct: 425 LNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSR 484

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
            G  + A +L + +  QG+ P+  T+  ++ G C  G +  A  F N +  K L+     
Sbjct: 485 NGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLEN---- 540

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           Y+  + G  K   T +AY L   +  +G      +   L+  LC  G  ++A  LL +M+
Sbjct: 541 YSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERML 600

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
                P+ I Y  +I A    GD++R + +F+ ++ +G++P ++TYT++I+ +     L 
Sbjct: 601 ALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLR 660

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRL-----RRIDQAYG----------LFIDME 655
            A   F++M+ +GI+P+VITY  +++G  ++     R +  + G           + +M+
Sbjct: 661 EARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMDASPFWSEMK 720

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           E GI P+   YT+LI+ +C   N Q+A+ LY EM+ R ++PD  T++ALL
Sbjct: 721 EMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALL 770



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 143/475 (30%), Positives = 239/475 (50%), Gaps = 54/475 (11%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           I   L+  Y K   + Q + + N M+ NG+  +    + I++ L + G + +  + ++  
Sbjct: 334 IYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEF 393

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
            + GI    V YN ++D+ CK G+++EA+ELL EM+GR  S + V Y  LI G+   G+L
Sbjct: 394 RDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKL 453

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
             A+ +  +M + G++    +YN ++ G+S  GL  EAL L + + T+G+ P  AT+N +
Sbjct: 454 VDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRI 513

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           I GLC  G+V +A   F   L    + +   Y+ ++ GYC++    +A+ LF  L  + +
Sbjct: 514 IEGLCMAGKVKEA-EAFLNTLEDKCLEN---YSAMVDGYCKANFTRKAYELFSRLSKQGI 569

Query: 415 V-----------------------------------PTVVTYNTLIDGLCRYGDLEVAQQ 439
           +                                   P  + Y  LI   CR GD++ AQ 
Sbjct: 570 LVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQL 629

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT------ 493
           + + ++ +GI PDVITYT+M+NG C++  L  AR+ FN+M  +G++PD   YT       
Sbjct: 630 VFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHS 689

Query: 494 ----QIAGELKLGDTSEAYRLQ-----EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
               ++A  L+    SE  ++       EM   G  PD++ Y VL+   CK  +L++A  
Sbjct: 690 KVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAIN 749

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           L  +M+  G  PD +TYT+++ +    GD+ R   L N M  KG+ P     +VL
Sbjct: 750 LYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSVL 804



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 131/489 (26%), Positives = 225/489 (46%), Gaps = 77/489 (15%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVV-------CVNMHGILDVLIGGGLSSCV 171
           G+  D +++  ++    ++G L  A  +   +V       CV +  IL  L   G++S V
Sbjct: 327 GIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEV 386

Query: 172 SIK--------------ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
             +              + ++++    K   VE+ + + N+M    +  DV +   +I  
Sbjct: 387 VDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAG 446

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
               G  V A+ ++  M E GI+P IVTYN ++  F + G  +EALELL  +  +G  PN
Sbjct: 447 YCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPN 506

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGY-------------- 323
             T+N +I G    G++++A   +  +    L+    +Y+ ++ GY              
Sbjct: 507 SATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLE----NYSAMVDGYCKANFTRKAYELFS 562

Query: 324 --SEKGLLVE-------------------ALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
             S++G+LV+                   AL L E M+   V P    Y  LI   C+ G
Sbjct: 563 RLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDG 622

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            +  A+  F  ++ + + PD+I+Y  ++ GYCR   + EA  +F++++ R + P V+TY 
Sbjct: 623 DMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYT 682

Query: 423 TLIDGLCRYGDLEVAQQLK----------------ENMINQGILPDVITYTIMVNGSCKM 466
            ++DG  +  +L++A+ L+                  M   GI PDV+ YT++++  CK 
Sbjct: 683 VVLDGHSKV-NLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKT 741

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
            NL  A   ++EM+ +GLQPD   YT  ++     GD   A  L  EM  KG  PD    
Sbjct: 742 NNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAM 801

Query: 527 NVLVHGLCK 535
           +VL  G+ K
Sbjct: 802 SVLHRGILK 810



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 162/342 (47%)

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
           I+  + L+  Y R G   EA     + + R  VP +++ N L++ L  +G +++A  +  
Sbjct: 157 ILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYR 216

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
           ++   G+ P+  TY I +   C+ GN   A + F EM   G+ P+    +T I G     
Sbjct: 217 HLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHK 276

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
            +   Y     + A  +P D   Y  ++ G C    L+EA ++   MV +G  PD   Y 
Sbjct: 277 RSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYG 336

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
           ++IHA  + G+L +   L N+M+  G+    V  + ++      G        F E +  
Sbjct: 337 ALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDS 396

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
           GI  + + YN +++ LC+L ++++A  L  +M+   +  +   YT LI   C  G   +A
Sbjct: 397 GIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDA 456

Query: 683 LRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
             +++EM +R IEPD  T++ L+        K  A+E L+ +
Sbjct: 457 KNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCI 498


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 154/481 (32%), Positives = 254/481 (52%), Gaps = 5/481 (1%)

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           KAR++   M E G  P    YN ++  + K  +  +A + L EM    C P  VTY  ++
Sbjct: 28  KARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIV 87

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            G  + G  + A  L+ +M   G   + ++YN I+ G  E+  L EA  + EEM  RG  
Sbjct: 88  DGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYF 147

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P + TYN  I GLCK  RV +AR +F  + R  V PD++SY T++ G C+SG++  A  +
Sbjct: 148 PDVVTYNSFIKGLCKCDRVDEAR-KF--LARMPVTPDVVSYTTVINGLCKSGDLDSASRM 204

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
            D++ +R   P VVTY++LIDG C+ G++E A  L ++M+  G  P+++ Y  ++    +
Sbjct: 205 LDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHR 264

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
           +G++  A +   EM R+G  PD  +Y   I G  K     +A  + + M+ +G  P+  +
Sbjct: 265 LGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASS 324

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           Y++LV  LCK   L++A  L+ +      I D + YT ++    + G       LF+ +L
Sbjct: 325 YSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVL 384

Query: 586 -RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRI 644
             K   P +  Y V++ +H  R +++ A     +M  +    NV+T+N L++GLC   R+
Sbjct: 385 DEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNC-CNVVTWNILVHGLCVDDRL 443

Query: 645 DQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
             A  + + M +EG +P+  TY  L++  C  G    AL L++E +     PD  T+SAL
Sbjct: 444 SDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSAL 503

Query: 705 L 705
           +
Sbjct: 504 I 504



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 133/425 (31%), Positives = 230/425 (54%), Gaps = 4/425 (0%)

Query: 269 MQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
           M  + C P+  T+ +L+ G  R+ +LE+AR L+  M ++G       YN +I GYS+   
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 329 LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNT 388
             +A     EMV     PT+ TY  ++ GLCK GR  DA     EM  K   P+I +YN 
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 389 LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
           ++ G C    + EA  + +E+  R   P VVTYN+ I GLC+   ++ A++    M    
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---P 177

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
           + PDV++YT ++NG CK G+L  A    ++M  +G  PD   Y++ I G  K G+   A 
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAM 237

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
            L + ML  G  P+++ YN L+  L +LG + +A ++L +M   GF PD ++Y + I   
Sbjct: 238 GLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGL 297

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
            +   +++ + +F+ M+ +G +P   +Y++L+     +  L+ A     + + K    ++
Sbjct: 298 CKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDI 357

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGIL-PNKYTYTILINENCNAGNWQEALRLYK 687
           + Y  L++GLC+  R D+A  LF  + +E I  P+ + Y ++++ +C      +AL+++K
Sbjct: 358 LLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHK 417

Query: 688 EMLDR 692
           +ML+R
Sbjct: 418 QMLER 422



 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 174/635 (27%), Positives = 285/635 (44%), Gaps = 89/635 (14%)

Query: 123 DEFVFCTILEILIESGLLRSAYWVV---ETVVCVNMHGILDVLIGGGLSSCVSIKILDLL 179
           D F F  +L  L  S  L  A  ++   + + CV    I + LI G              
Sbjct: 9   DAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISG-------------- 54

Query: 180 LLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGI 239
              Y+K     Q      +M++N  LP V     I+  L   G +  A ++   M + G 
Sbjct: 55  ---YSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGC 111

Query: 240 KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
            P+I TYN +++  C+E ++ EA ++L EM  RG  P+ VTYN  I G  +   +++AR 
Sbjct: 112 SPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARK 171

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
               + ++ +     SY  +I G  + G L  A  + ++M  RG  P + TY+ LI G C
Sbjct: 172 F---LARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFC 228

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
           K G V  A      ML+    P++++YN+LL    R G+IG+A  +  E+  R   P VV
Sbjct: 229 KGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVV 288

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILP---------------------------- 451
           +YN  IDGLC+   ++ A+ + + M+ +G  P                            
Sbjct: 289 SYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQA 348

Query: 452 -------DVITYTIMVNGSCKMGNLSMAREFFNEML-RKGLQPDRFAYTTQIAGELKLGD 503
                  D++ YT++++G CK G    A   F+++L  K  +PD F Y   +    K   
Sbjct: 349 REKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQ 408

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
             +A ++ ++ML +    +++T+N+LVHGLC    L +A  +L  MV +GFIPD +TY +
Sbjct: 409 IDKALQIHKQMLERNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGT 467

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH---------------------- 601
           ++ A  + G      +LF   ++ G  P +VTY+ LI                       
Sbjct: 468 LVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLDVAL 527

Query: 602 ------AHAARGRLELAFMYFSEMQVKGIRPNVITYNALING-LCRLRRIDQAYGLFIDM 654
                  +A  G  +L    F E+    + PN  T+   I+G L +   + +A GLF   
Sbjct: 528 WNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRA 587

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
            + G  P+ +    LI+     G+ +EA R++  M
Sbjct: 588 VKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSM 622



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 111/349 (31%), Positives = 178/349 (51%), Gaps = 6/349 (1%)

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M+ K+  PD  ++  LL G CRS  + +A  L   ++    VP    YN LI G  +  D
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
              A +    M+    LP V+TYT +V+G CK G    A +  +EM  KG  P+ + Y  
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            + G  +     EA ++ EEM  +G+ PD++TYN  + GLCK   ++EA + L +M    
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---P 177

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
             PD ++YT++I+   + GDL     + + M  +G +P +VTY+ LI      G +E A 
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAM 237

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
                M   G RPN++ YN+L+  L RL  I +A  + ++ME  G  P+  +Y   I+  
Sbjct: 238 GLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGL 297

Query: 674 CNAGNWQEALRLYKEMLDREIEPDYCTHSAL---LLKQLDKDYKVHAVE 719
           C A   ++A  ++  M++R   P+  ++S L   L K+ + D  +  VE
Sbjct: 298 CKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVE 346



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 210/459 (45%), Gaps = 45/459 (9%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           + R  + PDV +   +I  L  +G    A  +   M   G  P +VTY++++D FCK GE
Sbjct: 173 LARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGE 232

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           ++ A+ LL  M   GC PN V YN L+    R G + +A  ++ +M + G      SYN 
Sbjct: 233 VERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNA 292

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATY--------------------------- 351
            I G  +   + +A  + + MV RG  P  ++Y                           
Sbjct: 293 CIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKY 352

Query: 352 ---NILIY-----GLCKWGRVSDARHRFFEMLRKNVI-PDIISYNTLLYGYCRSGNIGEA 402
              +IL+Y     GLCK GR  +A   F ++L + +  PD+  YN +L  +C+   I +A
Sbjct: 353 QIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKA 412

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
             +  ++  RN    VVT+N L+ GLC    L  A+ +   M+++G +PD +TY  +V+ 
Sbjct: 413 LQIHKQMLERNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDA 471

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            CK G  + A E F E ++ G  PD   Y+  I G +      EAY L  ++       D
Sbjct: 472 MCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKL-------D 524

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD-LRRGRDLF 581
           +  +N ++ G  + GS +   +L  +++     P+  T+   I   L   + L + R LF
Sbjct: 525 VALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLF 584

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           +  ++ G  P L     LI   A  G LE A   F  M+
Sbjct: 585 DRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSMK 623


>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 623

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 180/622 (28%), Positives = 300/622 (48%), Gaps = 31/622 (4%)

Query: 27  FFPFCFSVHTYPSISESNNKDSVLNPESESYYKELIISTVEEKPWAFCNNRWVSDHFQAV 86
           ++P    + ++   S +   +S L P +     E+++ +++   W          HF   
Sbjct: 22  YYPTAARLSSFAQTSTTT--ESQLPPITS----EVLLESIKSSQW----------HFIEH 65

Query: 87  VSD---PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSA 143
           V+D   P L+   L  + + P +A  F   ++ +     D    C  + ++ +    +S 
Sbjct: 66  VTDKLIPSLVSTTLLSLVKTPDLAFNFVNHIDLRC---LDFQTQCLAIAVVSKLSSPKSV 122

Query: 144 YWVVETVVCVNMHGILD-----VLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNK 198
             +++ VV    + + D     VL    L +  +I + D ++  Y +  MV++ +  F  
Sbjct: 123 TQLLKEVVSTRKNSVRDLFDELVLAHDRLQTKSTI-LFDFMVRFYCQLRMVDEAIECFYL 181

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           M   G  P  + CN I+ +L        A   Y  M    IK ++ T+N M++  CKEG+
Sbjct: 182 MKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGK 241

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           +++A   L  M+  G  P  VTYN L+ G+S  G +E AR +I +M   G +    +YNP
Sbjct: 242 LKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNP 301

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           I+     +G   E L    EM   G+ P   +YNILI G    G +  A     EM+++ 
Sbjct: 302 ILSWMCNEGRASEVL---REMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQG 358

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
           ++P   +YNTL++G      I  A +L  E+R + +V   VTYN +I+G C++GD + A 
Sbjct: 359 MVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAF 418

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
            L + M+  GI P   TYT ++   C+      A E F +++ KG++PD     T + G 
Sbjct: 419 ALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGH 478

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
              G+   A+ L +EM      PD +TYN L+ GLC  G  EEA EL+ +M   G  PDH
Sbjct: 479 CATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDH 538

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
           I+Y ++I    + GD +    + + ML  G +PTL+TY  L+   +     ELA     E
Sbjct: 539 ISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLRE 598

Query: 619 MQVKGIRPNVITYNALINGLCR 640
           M+ +GI PN  ++ ++I  + +
Sbjct: 599 MKSEGIVPNDSSFCSVIEAMSK 620



 Score =  255 bits (652), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 145/453 (32%), Positives = 239/453 (52%), Gaps = 3/453 (0%)

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           +A E + +M E G  P   T N +L    +   ++ A     +M       N  T+N++I
Sbjct: 174 EAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMI 233

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
               + G+L++A+G +  M   G+K +  +YN ++ GYS +G +  A  +  EM ++G  
Sbjct: 234 NVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQ 293

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P L TYN ++  +C  GR S+      EM    ++PD +SYN L+ G   +G++  AF  
Sbjct: 294 PDLQTYNPILSWMCNEGRASEV---LREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAY 350

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
            DE+  + +VPT  TYNTLI GL     +E A+ L   +  +GI+ D +TY I++NG C+
Sbjct: 351 RDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQ 410

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
            G+   A    +EM+  G++P +F YT+ I    +   T EA  L E+++ KG  PDL+ 
Sbjct: 411 HGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVM 470

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
            N L+ G C  G+++ A  LL++M      PD +TY  ++      G     R+L   M 
Sbjct: 471 MNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMK 530

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
           R+G+ P  ++Y  LI  ++ +G  + AF+   EM   G  P ++TYNAL+ GL + +  +
Sbjct: 531 RRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGE 590

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGN 678
            A  L  +M+ EGI+PN  ++  +I     + N
Sbjct: 591 LAEELLREMKSEGIVPNDSSFCSVIEAMSKSDN 623



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 137/456 (30%), Positives = 220/456 (48%), Gaps = 3/456 (0%)

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
           S + ++ M+  +C+   + EA+E  + M+ +G  P   T N +++  SR   +E A    
Sbjct: 155 STILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFY 214

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
            DM ++ +K + +++N +I    ++G L +A      M + G+ PT+ TYN L+ G    
Sbjct: 215 ADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLR 274

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           GR+  AR    EM  K   PD+ +YN +L   C  G   E   +  E++   LVP  V+Y
Sbjct: 275 GRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRASE---VLREMKGIGLVPDSVSY 331

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           N LI G    GDLE A   ++ M+ QG++P   TY  +++G      +  A     E+  
Sbjct: 332 NILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIRE 391

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
           KG+  D   Y   I G  + GD  +A+ L +EM+  G  P   TY  L++ LC+     E
Sbjct: 392 KGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTRE 451

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A+EL  K+VG G  PD +   +++      G++ R   L   M R  + P  VTY  L+ 
Sbjct: 452 ADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMR 511

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
                G+ E A     EM+ +GI+P+ I+YN LI+G  +      A+ +  +M   G  P
Sbjct: 512 GLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNP 571

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
              TY  L+       + + A  L +EM    I P+
Sbjct: 572 TLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPN 607



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 142/272 (52%)

Query: 197 NKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKE 256
           ++M++ G++P     N +I  L        A  + R + E GI    VTYN +++ +C+ 
Sbjct: 352 DEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQH 411

Query: 257 GEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSY 316
           G+ ++A  L  EM   G  P   TY  LI    R  +  +A  L   ++  G+K      
Sbjct: 412 GDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMM 471

Query: 317 NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
           N ++ G+   G +  A +L +EM    + P   TYN L+ GLC  G+  +AR    EM R
Sbjct: 472 NTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKR 531

Query: 377 KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
           + + PD ISYNTL+ GY + G+   AF++ DE+ S    PT++TYN L+ GL +  D E+
Sbjct: 532 RGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGEL 591

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
           A++L   M ++GI+P+  ++  ++    K  N
Sbjct: 592 AEELLREMKSEGIVPNDSSFCSVIEAMSKSDN 623



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 61/122 (50%)

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           M  KG  P   T   ++   +   R+E A++++++M    I+ NV T+N +IN LC+  +
Sbjct: 182 MKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGK 241

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSA 703
           + +A G    ME  GI P   TY  L+      G  + A  +  EM  +  +PD  T++ 
Sbjct: 242 LKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNP 301

Query: 704 LL 705
           +L
Sbjct: 302 IL 303



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 3/131 (2%)

Query: 578 RDLFNNML---RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
           RDLF+ ++    +  + + + +  ++  +     ++ A   F  M+ KG  P   T N +
Sbjct: 138 RDLFDELVLAHDRLQTKSTILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHI 197

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           ++ L RL RI+ A+  + DM    I  N YT+ I+IN  C  G  ++A      M    I
Sbjct: 198 LSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGI 257

Query: 695 EPDYCTHSALL 705
           +P   T++ L+
Sbjct: 258 KPTIVTYNTLV 268



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 45/194 (23%), Positives = 81/194 (41%), Gaps = 21/194 (10%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHG---ILDVLIGGGLSSCVSIKI 175
           G+K  +F + +++ +L      R A  + E VV   M     +++ L+ G  ++    + 
Sbjct: 428 GIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRA 487

Query: 176 LDLL----LLIYTKKSMVEQCLL--------------VFNKMLRNGLLPDVKNCNRIIKV 217
             LL     +      +   CL+              +  +M R G+ PD  + N +I  
Sbjct: 488 FSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISG 547

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
               G +  A  V   M   G  P+++TYN +L    K  + + A ELL EM+  G  PN
Sbjct: 548 YSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPN 607

Query: 278 GVTYNVLITGFSRN 291
             ++  +I   S++
Sbjct: 608 DSSFCSVIEAMSKS 621


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 146/486 (30%), Positives = 254/486 (52%), Gaps = 2/486 (0%)

Query: 241 PSIVTYNTMLDSFCK--EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           PSI  +N +L +  K  + ++  +L LL +M   G  P+ VT + L+ G+     +  A 
Sbjct: 40  PSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 99

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L+  M+++G +    ++  +I G        EA+ L + MV RG  P L TY +++ GL
Sbjct: 100 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 159

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           CK G +  A +   +M    +  D++ +NT++   C+  ++ +A  LF E+ ++ + P V
Sbjct: 160 CKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV 219

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           VTY++LI  LC YG    A QL  +MI + I P+++T+  +++   K G    A +  ++
Sbjct: 220 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDD 279

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M+++ + PD F Y + I G        +A ++ E M++K   PDL TYN L+ G CK   
Sbjct: 280 MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKR 339

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           +E+  EL R+M   G + D +TYT++I      GD    + +F  M+  G+ P ++TY++
Sbjct: 340 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 399

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           L+      G+LE A   F  MQ   I+ ++  Y  +I G+C+  ++D  + LF  +  +G
Sbjct: 400 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 459

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAV 718
           + PN  TY  +I+  C+    QEA  L K+M +    PD  T++ L+   L    K  + 
Sbjct: 460 VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASA 519

Query: 719 EYLESL 724
           E +  +
Sbjct: 520 ELIREM 525



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 146/510 (28%), Positives = 266/510 (52%), Gaps = 4/510 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRI---IKVLRDNGFSVKAREVYRMMGEFGI 239
           + K   ++  + +F  M+++  LP +   N++   I  ++     +    + +MM + G 
Sbjct: 17  WGKDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMM-KLGY 75

Query: 240 KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
           +PSIVT +++L+ +C    + +A+ L+ +M   G  P+ +T+  LI G   + +  +A  
Sbjct: 76  EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 135

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
           L+  M++ G + +  +Y  ++ G  ++G +  A NL  +M    +   +  +N +I  LC
Sbjct: 136 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLC 195

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
           K+  V DA + F EM  K + P++++Y++L+   C  G   +A  L  ++  + + P +V
Sbjct: 196 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 255

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
           T+N LID   + G    A++L ++MI + I PD+ TY  ++NG C    L  A++ F  M
Sbjct: 256 TFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFM 315

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
           + K   PD   Y T I G  K     +   L  EM  +G   D +TY  L+ GL   G  
Sbjct: 316 VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 375

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           + A ++ ++MV DG  PD +TY+ ++      G L +  ++F+ M +  +   +  YT +
Sbjct: 376 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 435

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           I      G+++  +  F  + +KG++PNV+TYN +I+GLC  R + +AY L   M+E+G 
Sbjct: 436 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 495

Query: 660 LPNKYTYTILINENCNAGNWQEALRLYKEM 689
           LP+  TY  LI  +   G+   +  L +EM
Sbjct: 496 LPDSGTYNTLIRAHLRDGDKAASAELIREM 525



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 142/500 (28%), Positives = 236/500 (47%), Gaps = 87/500 (17%)

Query: 193 LLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR-----EVYRMMGEFGIKPSIVTYN 247
           L +  KM++ G  P +   + ++     NG+    R      +   M E G +P  +T+ 
Sbjct: 64  LALLGKMMKLGYEPSIVTLSSLL-----NGYCHGKRISDAVALVDQMVEMGYRPDTITFT 118

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
           T++       +  EA+ L+  M  RGC PN VTY V++ G  + G+++ A  L+  M   
Sbjct: 119 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 178

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
            ++     +N II    +   + +ALNL +EM T+G+ P + TY+ LI  LC +GR SDA
Sbjct: 179 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 238

Query: 368 RH----------------------------RFFE-------MLRKNVIPDIISYNTLLYG 392
                                         +F E       M+++++ PDI +YN+L+ G
Sbjct: 239 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLING 298

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY--------------------- 431
           +C    + +A  +F+ + S++  P + TYNTLI G C+                      
Sbjct: 299 FCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 358

Query: 432 --------------GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
                         GD + AQ++ + M++ G+ PD++TY+I+++G C  G L  A E F+
Sbjct: 359 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 418

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            M +  ++ D + YTT I G  K G   + + L   +  KG  P+++TYN ++ GLC   
Sbjct: 419 YMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKR 478

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR---KGLSPTLV 594
            L+EA  LL+KM  DG +PD  TY ++I A L  GD     +L   M      G + T+ 
Sbjct: 479 LLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG 538

Query: 595 TYTVLIHAHAARGRLELAFM 614
               ++H     GRL+ +F+
Sbjct: 539 LVANMLH----DGRLDKSFL 554



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 122/376 (32%), Positives = 190/376 (50%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K+  ++    + NKM    +  DV   N II  L        A  +++ M   GI+P++V
Sbjct: 161 KRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 220

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY++++   C  G   +A +LL +M  +  +PN VT+N LI  F + G+  +A  L  DM
Sbjct: 221 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDM 280

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           +K  +     +YN +I G+     L +A  + E MV++   P L TYN LI G CK  RV
Sbjct: 281 IKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRV 340

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            D    F EM  + ++ D ++Y TL+ G    G+   A  +F ++ S  + P ++TY+ L
Sbjct: 341 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 400

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           +DGLC  G LE A ++ + M    I  D+  YT M+ G CK G +    + F  +  KG+
Sbjct: 401 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 460

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
           +P+   Y T I+G        EAY L ++M   G  PD  TYN L+    + G    + E
Sbjct: 461 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAE 520

Query: 545 LLRKMVGDGFIPDHIT 560
           L+R+M    F+ D  T
Sbjct: 521 LIREMRSCRFVGDAST 536


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 250/484 (51%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PS V +N +L S  K  +      L  +M   G  P+  T N+LI  F        A  +
Sbjct: 65  PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSV 124

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  +LKLGL+    ++  +I G   +G + +AL+L ++M+  G  P + TY  LI GLCK
Sbjct: 125 LAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 184

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G  + A      M + N  PD++ Y +++   C+   + EAF LF ++  + + P + T
Sbjct: 185 VGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFT 244

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y +LI  LC   + +    L   MIN  I+PDV+ ++ +V+  CK G ++ A +  + M+
Sbjct: 245 YTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMI 304

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            +G++P+   Y   + G     +  EA ++ + M+  G+ P++I+YN L++G CK+  ++
Sbjct: 305 IRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMD 364

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           +A  L  +M     IP+ +TY +++H    +G L+    LF+ M+  G  P L TY +L+
Sbjct: 365 KATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILL 424

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                +  L+ A      ++   + P++  Y  +I+G+CR   ++ A  +F ++  +G+ 
Sbjct: 425 DYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLR 484

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
           PN  TYTI+IN  C  G   EA +L+ EM      PD CT++ +    L     + A++ 
Sbjct: 485 PNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQL 544

Query: 721 LESL 724
           L+ +
Sbjct: 545 LQEM 548



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 159/535 (29%), Positives = 262/535 (48%), Gaps = 1/535 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           ++  L  FN+ML     P   + NR++  +           +   M  FGI P + T N 
Sbjct: 48  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 107

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++SFC       A  +L ++   G  P+  T+  LI G    G++  A  L   M+  G
Sbjct: 108 LINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 167

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            + +  +Y  +I G  + G    A+ L   M      P +  Y  +I  LCK  +V++A 
Sbjct: 168 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 227

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
           + F +M+ + + PDI +Y +L++  C          L +++ +  ++P VV ++T++D L
Sbjct: 228 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 287

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G +  A  + + MI +G+ P+V+TY  +++G C    +  A + F+ M+  G  P+ 
Sbjct: 288 CKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNV 347

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
            +Y T I G  K+    +A  L EEM  K   P+ +TYN L+HGLC +G L++A  L  +
Sbjct: 348 ISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHE 407

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           MV  G IPD  TY  ++    +   L     L   +    + P +  YT++I      G 
Sbjct: 408 MVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGE 467

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           LE A   FS +  KG+RPNV TY  +INGLCR   +D+A  LF++M+  G  P+  TY  
Sbjct: 468 LEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNT 527

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLES 723
           +            A++L +EML R    D  T + LL++ L  D    +V+ + S
Sbjct: 528 ITQGLLQNKEALRAIQLLQEMLARGFSADVST-TTLLVEMLCDDKLDQSVKQILS 581



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 126/366 (34%), Positives = 195/366 (53%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   V +   +F+KM+  G+ PD+     +I  L +         +   M    I P +V
Sbjct: 219 KDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVV 278

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
            ++T++D+ CKEG++ EA +++  M  RG  PN VTYN L+ G     E+++A  +   M
Sbjct: 279 IFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTM 338

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           +  G   +  SYN +I GY +   + +A  L EEM  + + P   TYN L++GLC  GR+
Sbjct: 339 VHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRL 398

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            DA   F EM+    IPD+ +Y  LL   C+  ++ EA  L   +   N+ P +  Y  +
Sbjct: 399 QDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIV 458

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           IDG+CR G+LE A+ +  N+ ++G+ P+V TYTIM+NG C+ G L  A + F EM   G 
Sbjct: 459 IDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGC 518

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            PD   Y T   G L+  +   A +L +EMLA+GF  D+ T  +LV  LC     +   +
Sbjct: 519 SPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQ 578

Query: 545 LLRKMV 550
           +L + V
Sbjct: 579 ILSEFV 584



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 135/296 (45%), Gaps = 27/296 (9%)

Query: 123 DEFVFCTILEILIESGLLRSAYWVVETVV-------CVNMHGILDVLIGGGLSSCV--SI 173
           D  +F T+++ L + G +  A+ VV+ ++        V  + ++D   G  L S +  ++
Sbjct: 276 DVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMD---GHCLQSEMDEAV 332

Query: 174 KILDLLL-------------LI--YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL 218
           K+ D ++             LI  Y K   +++   +F +M +  L+P+    N ++  L
Sbjct: 333 KVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGL 392

Query: 219 RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNG 278
              G    A  ++  M   G  P + TY  +LD  CK+  + EA+ LL  ++G    P+ 
Sbjct: 393 CHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDI 452

Query: 279 VTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
             Y ++I G  R GELE AR +  ++   GL+ +  +Y  +I G   +GLL EA  L  E
Sbjct: 453 QIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFME 512

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
           M   G +P   TYN +  GL +      A     EML +    D+ +   L+   C
Sbjct: 513 MDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLC 568


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 148/503 (29%), Positives = 264/503 (52%), Gaps = 3/503 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
           ++  + +F  M+++   P +   ++++  + + N F +    +   M   GI  ++ TY+
Sbjct: 56  LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDL-VISLGEQMQNLGISHNLYTYS 114

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
             ++ FC+  ++  AL +L +M   G  P+ VT N L+ GF     + +A  L+  M+++
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           G +    ++  ++ G  +     EA+ L E MV +G  P L TY  +I GLCK G    A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
            +   +M +  +  D++ YNT++ G C+  ++ +AF LF+++ ++ + P V TYN LI  
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR-KGLQP 486
           LC YG    A +L  +M+ + I PD++ +  +++   K G L  A + ++EM++ K   P
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354

Query: 487 DRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
           D  AY T I G  K     E   +  EM  +G   + +TY  L+HG  +    + A  + 
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414

Query: 547 RKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAAR 606
           ++MV DG  PD +TY  ++      G++     +F  M ++ +   +VTYT +I A    
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474

Query: 607 GRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
           G++E  +  F  + +KG++PNV+TY  +++G CR    ++A  LF++M+E+G LPN  TY
Sbjct: 475 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTY 534

Query: 667 TILINENCNAGNWQEALRLYKEM 689
             LI      G+   +  L KEM
Sbjct: 535 NTLIRARLRDGDEAASAELIKEM 557



 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 146/485 (30%), Positives = 254/485 (52%), Gaps = 1/485 (0%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PSIV ++ +L +  K  +    + L  +MQ  G S N  TY++ I  F R  +L  A  +
Sbjct: 73  PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  M+KLG   S  + N ++ G+     + EA+ L ++MV  G  P   T+  L++GL +
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
             + S+A      M+ K   PD+++Y  ++ G C+ G    A  L +++    +   VV 
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YNT+IDGLC+Y  ++ A  L   M  +GI PDV TY  +++  C  G  S A    ++ML
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML-AKGFPPDLITYNVLVHGLCKLGSL 539
            K + PD   +   I   +K G   EA +L +EM+ +K   PD++ YN L+ G CK   +
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           EE  E+ R+M   G + + +TYT++IH   +  D    + +F  M+  G+ P ++TY +L
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNIL 432

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           +      G +E A + F  MQ + ++ +++TY  +I  LC+  +++  + LF  +  +G+
Sbjct: 433 LDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGV 492

Query: 660 LPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVE 719
            PN  TYT +++  C  G  +EA  L+ EM +    P+  T++ L+  +L    +  + E
Sbjct: 493 KPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAE 552

Query: 720 YLESL 724
            ++ +
Sbjct: 553 LIKEM 557



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 139/468 (29%), Positives = 229/468 (48%), Gaps = 37/468 (7%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + ++S +   L +  KM++ G  P +   N ++          +A  +   M E G +P 
Sbjct: 120 FCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPD 179

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            VT+ T++    +  +  EA+ L+  M  +GC P+ VTY  +I G  + GE + A  L+ 
Sbjct: 180 TVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLN 239

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M K  ++     YN II G  +   + +A +L  +M T+G+ P + TYN LI  LC +G
Sbjct: 240 KMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYG 299

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL-RSRNLVPTVVTY 421
           R SDA     +ML KN+ PD++ +N L+  + + G + EA  L+DE+ +S++  P VV Y
Sbjct: 300 RWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAY 359

Query: 422 NTLIDGLCRYG-----------------------------------DLEVAQQLKENMIN 446
           NTLI G C+Y                                    D + AQ + + M++
Sbjct: 360 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 419

Query: 447 QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSE 506
            G+ PD++TY I+++G C  GN+  A   F  M ++ ++ D   YTT I    K G   +
Sbjct: 420 DGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVED 479

Query: 507 AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
            + L   +  KG  P+++TY  ++ G C+ G  EEA+ L  +M  DG +P+  TY ++I 
Sbjct: 480 GWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIR 539

Query: 567 ASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
           A L  GD     +L   M   G +    T+  L+      GRL+ +F+
Sbjct: 540 ARLRDGDEAASAELIKEMRSCGFAGDASTFG-LVTNMLHDGRLDKSFL 586



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/442 (30%), Positives = 222/442 (50%), Gaps = 2/442 (0%)

Query: 265 LLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYS 324
           L WE    G S +    N L     ++ +L+ A GL  DM+K     S   ++ ++   +
Sbjct: 28  LCWERSFAGASSDDCREN-LSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIA 86

Query: 325 EKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDII 384
           +       ++L E+M   G++  L TY+I I   C+  ++S A     +M++    P I+
Sbjct: 87  KMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIV 146

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
           + N+LL G+C    I EA  L D++      P  VT+ TL+ GL ++     A  L E M
Sbjct: 147 TLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERM 206

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
           + +G  PD++TY  ++NG CK G   +A    N+M +  ++ D   Y T I G  K    
Sbjct: 207 VVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHM 266

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
            +A+ L  +M  KG  PD+ TYN L+  LC  G   +A+ LL  M+     PD + + ++
Sbjct: 267 DDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNAL 326

Query: 565 IHASLEMGDLRRGRDLFNNMLR-KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           I A ++ G L     L++ M++ K   P +V Y  LI       R+E     F EM  +G
Sbjct: 327 IDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRG 386

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
           +  N +TY  LI+G  + R  D A  +F  M  +G+ P+  TY IL++  CN GN + AL
Sbjct: 387 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETAL 446

Query: 684 RLYKEMLDREIEPDYCTHSALL 705
            +++ M  R+++ D  T++ ++
Sbjct: 447 VVFEYMQKRDMKLDIVTYTTMI 468



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 70/147 (47%)

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
           LF +M++    P++V ++ L+ A A   + +L      +MQ  GI  N+ TY+  IN  C
Sbjct: 62  LFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFC 121

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
           R  ++  A  +   M + G  P+  T   L+N  C+     EA+ L  +M++   +PD  
Sbjct: 122 RRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTV 181

Query: 700 THSALLLKQLDKDYKVHAVEYLESLTL 726
           T + L+      +    AV  +E + +
Sbjct: 182 TFTTLVHGLFQHNKASEAVALVERMVV 208


>gi|297849764|ref|XP_002892763.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297338605|gb|EFH69022.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 804

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 179/687 (26%), Positives = 345/687 (50%), Gaps = 36/687 (5%)

Query: 39  SISESNNKDSVLNPESESYYKELIISTVEEKPWAFCNNRWVSDHFQAVVSD------PEL 92
           S+S+ ++  +    +   +Y+E++    +     F +      HF+ +VS+       ++
Sbjct: 11  SVSDESSPTTNFTSDHRDFYQEILFGMKKIGFREFLHGH----HFRGLVSELRQIHVEDI 66

Query: 93  LVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVC 152
           +  +++   E   +++ FF+ +    G +   F    +  I       +    ++E ++ 
Sbjct: 67  MAELMS---ESSDLSVWFFKELRDIYGFRHSRFSTLLVSHIFAGQRRFKELQVILEQLL- 122

Query: 153 VNMHGILDVLIGGGLSSCVSIKIL-DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNC 211
               G L  L+        S  ++ D+LL + ++  MV++ L +  KM    L    ++ 
Sbjct: 123 -QEEGKLCELLSNSFRKWESTGLVWDMLLFLSSRLRMVDESLYILKKMKDRNLNVSTQSY 181

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
           N ++   R+     K  +VY+ + +     +  TY+T++D  C++ ++++A+  L   + 
Sbjct: 182 NSVLYNFRETD---KMWDVYKEIKD----KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEW 234

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
           +   P+ V++N +++ + + G ++ A+     +LK GL  S +S+N +I G    G + E
Sbjct: 235 KDIGPSVVSFNSIMSSYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAE 294

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
           AL L  +M   GV P   TYNIL+ G    G +S A     +ML K + PD+I+Y  LL 
Sbjct: 295 ALELASDMNKHGVEPDSVTYNILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITYTILLC 354

Query: 392 GYCRSGNIGEAFLLFDELRSRNL-VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
           G C+ GNI    +L  ++ SR   + +++ Y+ ++ GLC+ G ++ A  L  ++   G+ 
Sbjct: 355 GQCQLGNIDMGLILLKDMLSRGFELKSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLT 414

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
           PD++ Y+I+++G CK+G   MA   ++EM  K + P+       + G  + G   EA  L
Sbjct: 415 PDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSL 474

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
            + +++ G   D+I YN+++ G  K G +EEA EL +  +  G  P+  T+ S+I+   +
Sbjct: 475 LDSLISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCK 534

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
             ++   R + + +   GL P++V+YT L+ A+A  G ++       EM+ +GI P  +T
Sbjct: 535 TQNIAEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVT 594

Query: 631 YNALINGLCR----------LR-RIDQAYG-LFIDMEEEGILPNKYTYTILINENCNAGN 678
           Y+ +  GLCR          LR RI + +  +  DME EGI P++ TY  +I   C   +
Sbjct: 595 YSVIFKGLCRGWKLENCNQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKH 654

Query: 679 WQEALRLYKEMLDREIEPDYCTHSALL 705
              A  L+K+M  + ++P   T++ L+
Sbjct: 655 LSRAFELFKKMKSQNLDPTSATYNILI 681



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 150/514 (29%), Positives = 271/514 (52%), Gaps = 15/514 (2%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P V + N I+      GF   A+  +  + + G+ PS+ ++N +++  C  G + EALEL
Sbjct: 239 PSVVSFNSIMSSYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 298

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
             +M   G  P+ VTYN+L+ GF   G +  A  +I+DML  GL     +Y  ++CG  +
Sbjct: 299 ASDMNKHGVEPDSVTYNILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQ 358

Query: 326 KGLLVEALNLEEEMVTRGVA-PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDII 384
            G +   L L ++M++RG    ++  Y++++ GLCK GRV +A   F+++    + PD++
Sbjct: 359 LGNIDMGLILLKDMLSRGFELKSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLV 418

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
           +Y+ +++G C+ G    A  ++DE+  + ++P   T   ++ GLC+ G L  A+ L +++
Sbjct: 419 AYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSL 478

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
           I+ G   D+I Y I+++G  K G +  A E F   +  G+ P+   + + I G  K  + 
Sbjct: 479 ISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNI 538

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
           +EA ++ + +   G  P +++Y  L+      GS++   EL R+M  +G  P ++TY S+
Sbjct: 539 AEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTY-SV 597

Query: 565 IHASLEMG-------DLRRGRDL--FNNMLR----KGLSPTLVTYTVLIHAHAARGRLEL 611
           I   L  G        + R R L  FN++LR    +G++P  +TY  +I        L  
Sbjct: 598 IFKGLCRGWKLENCNQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSR 657

Query: 612 AFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
           AF  F +M+ + + P   TYN LI+ LC    I +A      +++  +  +K+ YT +I 
Sbjct: 658 AFELFKKMKSQNLDPTSATYNILIDSLCIYGCIRKADRFLYSLQKRNVSLSKFAYTTVIK 717

Query: 672 ENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            +C  G+ + A+ L+ ++LDR        +SA++
Sbjct: 718 AHCVKGDPEMAVILFNQLLDRGFNVSIRDYSAVI 751



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 161/528 (30%), Positives = 261/528 (49%), Gaps = 13/528 (2%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K   V+     F  +L+ GL+P V + N +I  L   G   +A E+   M + G++P 
Sbjct: 251 YCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPD 310

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            VTYN ++  F   G +  A E++ +M  +G SP+ +TY +L+ G  + G ++    L++
Sbjct: 311 SVTYNILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLK 370

Query: 303 DMLKLGLKV-SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
           DML  G ++ S   Y+ ++ G  + G + EAL+L  ++   G+ P L  Y+I+I+GLCK 
Sbjct: 371 DMLSRGFELKSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKL 430

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           G+   A   + EM  K ++P+  +   ++ G C+ G + EA  L D L S      ++ Y
Sbjct: 431 GKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILY 490

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           N +IDG  + G +E A +L +  I  GI P+V T+  ++ G CK  N++ AR+  + +  
Sbjct: 491 NIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKL 550

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
            GL P   +YTT +      G       L+ EM A+G PP  +TY+V+  GLC+   LE 
Sbjct: 551 YGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLEN 610

Query: 542 ANELLRK------------MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
            N++LR+            M  +G  PD ITY +II     +  L R  +LF  M  + L
Sbjct: 611 CNQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNL 670

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
            PT  TY +LI +    G +  A  +   +Q + +  +   Y  +I   C     + A  
Sbjct: 671 DPTSATYNILIDSLCIYGCIRKADRFLYSLQKRNVSLSKFAYTTVIKAHCVKGDPEMAVI 730

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           LF  + + G   +   Y+ +IN  C      E+   +  ML R I PD
Sbjct: 731 LFNQLLDRGFNVSIRDYSAVINRLCRRHLAIESKYFFCLMLSRGISPD 778



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 135/495 (27%), Positives = 245/495 (49%), Gaps = 54/495 (10%)

Query: 195 VFNKMLRNGLLPDVKN-----CNR-----------IIKVLRDNGFSVKAREVYRMMGEFG 238
           V   ML  GL PDV       C +           ++K +   GF +K            
Sbjct: 333 VIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELK------------ 380

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
              SI+ Y+ ML   CK G + EAL L ++++  G +P+ V Y+++I G  + G+ + A 
Sbjct: 381 ---SIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAV 437

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            +  +M    +  ++ +   I+ G  +KG+L+EA +L + +++ G    +  YNI+I G 
Sbjct: 438 RVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGY 497

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
            K G + +A   F   +   + P++ ++N+L+YGYC++ NI EA  + D ++   LVP+V
Sbjct: 498 AKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSV 557

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           V+Y TL+D     G ++  ++L+  M  +GI P  +TY+++  G C+   L    E  N+
Sbjct: 558 VSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKL----ENCNQ 613

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           +LR+ +  ++F +  +                  +M ++G  PD ITYN ++  LC++  
Sbjct: 614 VLRERIL-EKFNHVLR------------------DMESEGITPDQITYNTIIQYLCRVKH 654

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           L  A EL +KM      P   TY  +I +    G +R+      ++ ++ +S +   YT 
Sbjct: 655 LSRAFELFKKMKSQNLDPTSATYNILIDSLCIYGCIRKADRFLYSLQKRNVSLSKFAYTT 714

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           +I AH  +G  E+A + F+++  +G   ++  Y+A+IN LCR     ++   F  M   G
Sbjct: 715 VIKAHCVKGDPEMAVILFNQLLDRGFNVSIRDYSAVINRLCRRHLAIESKYFFCLMLSRG 774

Query: 659 ILPNKYTYTILINEN 673
           I P+     ++I  +
Sbjct: 775 ISPDLDICEVMIKSD 789



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 192/384 (50%), Gaps = 43/384 (11%)

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
           R    T   +++L++   +   V ++ +   +M  +N+     SYN++LY +  +  + +
Sbjct: 137 RKWESTGLVWDMLLFLSSRLRMVDESLYILKKMKDRNLNVSTQSYNSVLYNFRETDKMWD 196

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
              ++ E++ +N      TY+T++DGLCR   LE A         + I P V+++  +++
Sbjct: 197 ---VYKEIKDKN----EHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMS 249

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
             CK+G + MA+ FF  +L+ GL P  +                                
Sbjct: 250 SYCKLGFVDMAKSFFCTVLKCGLVPSVY-------------------------------- 277

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
              ++N+L++GLC +GS+ EA EL   M   G  PD +TY  ++     +G +    ++ 
Sbjct: 278 ---SHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLGMISGAGEVI 334

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR-PNVITYNALINGLCR 640
            +ML KGLSP ++TYT+L+      G +++  +   +M  +G    ++I Y+ +++GLC+
Sbjct: 335 QDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIPYSVMLSGLCK 394

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
             R+D+A  LF D+E  G+ P+   Y+I+I+  C  G +  A+R+Y EM  + I P+  T
Sbjct: 395 TGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRT 454

Query: 701 HSALLLKQLDKDYKVHAVEYLESL 724
             A++L    K   + A   L+SL
Sbjct: 455 LGAIMLGLCQKGMLLEARSLLDSL 478



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 10/187 (5%)

Query: 190 EQCLLVFNKMLRN----GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVT 245
           E+ L  FN +LR+    G+ PD    N II+ L       +A E+++ M    + P+  T
Sbjct: 617 ERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSAT 676

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           YN ++DS C  G +++A   L+ +Q R  S +   Y  +I      G+ E A  L   +L
Sbjct: 677 YNILIDSLCIYGCIRKADRFLYSLQKRNVSLSKFAYTTVIKAHCVKGDPEMAVILFNQLL 736

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG------LC 359
             G  VS   Y+ +I     + L +E+      M++RG++P L    ++I          
Sbjct: 737 DRGFNVSIRDYSAVINRLCRRHLAIESKYFFCLMLSRGISPDLDICEVMIKSDELLSWTI 796

Query: 360 KWGRVSD 366
           KWG + D
Sbjct: 797 KWGLLPD 803


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 153/548 (27%), Positives = 275/548 (50%), Gaps = 19/548 (3%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
           FN+MLR    P   + N+++  +           +   M  FGI P+I T + +++SFC 
Sbjct: 49  FNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCH 108

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
              +  A  +L ++   G  P+  T+  LI G    G++ +A  L   M+  G +    +
Sbjct: 109 LNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVT 168

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           Y  +I G  + G    A+ L   MV +   P +  YN +I  LCK  +V++A + F EM+
Sbjct: 169 YGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMV 228

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
            K + PDI +YN+L++  C          L +E+    ++P VV++NT++D LC+ G + 
Sbjct: 229 TKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVT 288

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            A  + + MI +G+ P+V+TYT +++G C +  +  A + F+ M+ KG  P+  +Y T I
Sbjct: 289 EAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLI 348

Query: 496 AGELKLG-------------------DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
            G  K+                    +  EA ++ + M+ KG  P++I+YN L++G CK+
Sbjct: 349 NGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKI 408

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
             +++A  L  +M     IPD +TY+++IH    +  L+    LF+ M+     P LVTY
Sbjct: 409 QRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTY 468

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
            +L+        L  A      ++   + P++   N  I+G+CR   ++ A  LF ++  
Sbjct: 469 RILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSS 528

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVH 716
           +G+ P+ +TY+I+IN  C  G   EA +L++EM +     + C ++ +    L  +    
Sbjct: 529 KGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSR 588

Query: 717 AVEYLESL 724
           A++ L+ +
Sbjct: 589 AIQLLQEM 596



 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 160/510 (31%), Positives = 255/510 (50%), Gaps = 25/510 (4%)

Query: 222 GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY 281
            FSV A+ +     + G +P   T+ T++   C EG++ EAL L  +M G G  P+ VTY
Sbjct: 115 AFSVLAKIL-----KLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTY 169

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
             LI G  + G    A  L+  M++   + +  +YN II    +   + EA NL  EMVT
Sbjct: 170 GTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVT 229

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
           +G++P + TYN LI+ LC             EM+   ++PD++S+NT++   C+ G + E
Sbjct: 230 KGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTE 289

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           A  + D++  R + P VVTY  L+DG C   +++ A ++ + M+ +G +P+VI+Y  ++N
Sbjct: 290 AHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLIN 349

Query: 462 GSCKMG-------------------NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
           G CK+                    N+  A + F+ M+ KG  P+  +Y T I G  K+ 
Sbjct: 350 GYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQ 409

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
              +A  L  EM  +   PD +TY+ L+HGLC +  L++A  L  +MV    IP+ +TY 
Sbjct: 410 RIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYR 469

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
            ++    +   L     L   +    L P +    + I      G LE A   FS +  K
Sbjct: 470 ILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSK 529

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
           G++P+V TY+ +INGLCR   +D+A  LF +M+E G   N   Y  +            A
Sbjct: 530 GLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRA 589

Query: 683 LRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
           ++L +EM+ R    D  T + L +K L  D
Sbjct: 590 IQLLQEMVARGFSADASTMT-LFVKMLSDD 618



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 152/499 (30%), Positives = 250/499 (50%), Gaps = 27/499 (5%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMGEFGIKPSIVTYNTMLDSF 253
           V  K+L+ G  PD      +I+ +   G   +A  ++ +M+GE G +P +VTY T+++  
Sbjct: 118 VLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGE-GFRPDVVTYGTLINGL 176

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           CK G    A+ LL  M  + C PN   YN +I    ++ ++ +A  L  +M+  G+    
Sbjct: 177 CKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDI 236

Query: 314 HSYNPII---CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
            +YN +I   C   E   +   LN   EMV   + P + ++N ++  LCK G+V++A   
Sbjct: 237 FTYNSLIHALCNLCEWKHVATLLN---EMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDV 293

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
             +M+++ V P++++Y  L+ G+C    + EA  +FD +  +  +P V++YNTLI+G C+
Sbjct: 294 VDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCK 353

Query: 431 -------------------YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
                              Y +++ A ++ + M+ +G +P+VI+Y  ++NG CK+  +  
Sbjct: 354 IQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDK 413

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A   F EM R+ L PD   Y+T I G   +    +A  L  EM+A    P+L+TY +L+ 
Sbjct: 414 AMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLD 473

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
            LCK   L EA  LL+ + G    PD       I      G+L   RDLF+N+  KGL P
Sbjct: 474 YLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQP 533

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
            + TY+++I+    RG L+ A   F EM   G   N   YN +  G  R     +A  L 
Sbjct: 534 DVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLL 593

Query: 652 IDMEEEGILPNKYTYTILI 670
            +M   G   +  T T+ +
Sbjct: 594 QEMVARGFSADASTMTLFV 612



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/372 (32%), Positives = 196/372 (52%), Gaps = 19/372 (5%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           + N+M+ + ++PDV + N ++  L   G   +A +V   M + G++P++VTY  ++D  C
Sbjct: 258 LLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHC 317

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG-------------------ELE 295
              EM EA+++   M  +GC PN ++YN LI G+ +                      ++
Sbjct: 318 LLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMD 377

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
           +A  +   M+  G   +  SYN +I GY +   + +A+ L  EM  + + P   TY+ LI
Sbjct: 378 EAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLI 437

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
           +GLC   R+ DA   F EM+  + IP++++Y  LL   C++  + EA  L   +   NL 
Sbjct: 438 HGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLD 497

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P +   N  IDG+CR G+LE A+ L  N+ ++G+ PDV TY+IM+NG C+ G L  A + 
Sbjct: 498 PDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKL 557

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
           F EM   G   +   Y T   G L+  +TS A +L +EM+A+GF  D  T  + V  L  
Sbjct: 558 FREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSD 617

Query: 536 LGSLEEANELLR 547
            G  +   ++LR
Sbjct: 618 DGLDQSLKQILR 629



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 125/397 (31%), Positives = 203/397 (51%), Gaps = 19/397 (4%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   V +   +F++M+  G+ PD+   N +I  L +         +   M +  I P +V
Sbjct: 213 KDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVV 272

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           ++NT++D+ CKEG++ EA +++ +M  RG  PN VTY  L+ G     E+++A  +   M
Sbjct: 273 SFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTM 332

Query: 305 LKLGLKVSAHSYNPIICGYS-----EKGL--------------LVEALNLEEEMVTRGVA 345
           +  G   +  SYN +I GY      +K +              + EA+ + + MV +G  
Sbjct: 333 VCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCM 392

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P + +YN LI G CK  R+  A + F EM R+ +IPD ++Y+TL++G C    + +A  L
Sbjct: 393 PNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIAL 452

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
           F E+ + + +P +VTY  L+D LC+   L  A  L + +    + PD+    I ++G C+
Sbjct: 453 FHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCR 512

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
            G L  AR+ F+ +  KGLQPD + Y+  I G  + G   EA +L  EM   G   +   
Sbjct: 513 AGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCI 572

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
           YN +  G  +      A +LL++MV  GF  D  T T
Sbjct: 573 YNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMT 609



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 162/331 (48%), Gaps = 1/331 (0%)

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
           +  +  A   F  MLR    P  + +N LL    +  +      L  ++ S  + P + T
Sbjct: 39  FNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYT 98

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
            + LI+  C    +  A  +   ++  G  PD  T+T ++ G C  G +  A   F++M+
Sbjct: 99  LHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMI 158

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            +G +PD   Y T I G  K+G+TS A RL   M+ K   P++  YN ++  LCK   + 
Sbjct: 159 GEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVT 218

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA  L  +MV  G  PD  TY S+IHA   + + +    L N M+   + P +V++  ++
Sbjct: 219 EAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVV 278

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
            A    G++  A     +M  +G+ PNV+TY AL++G C L  +D+A  +F  M  +G +
Sbjct: 279 DALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCM 338

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           PN  +Y  LIN  C      +A+  Y  ++D
Sbjct: 339 PNVISYNTLINGYCKIQRIDKAIH-YTXLMD 368



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 120/261 (45%), Gaps = 12/261 (4%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG------IKPS 242
           +++ + VF+ M+  G +P+V + N +I     NG+  K + + + M  FG      + P 
Sbjct: 376 MDEAVKVFDTMVCKGCMPNVISYNTLI-----NGY-CKIQRIDKAMYLFGEMCRQELIPD 429

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            VTY+T++   C    +Q+A+ L  EM      PN VTY +L+    +N  L +A  L++
Sbjct: 430 TVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLK 489

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            +    L       N  I G    G L  A +L   + ++G+ P + TY+I+I GLC+ G
Sbjct: 490 AIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRG 549

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            + +A   F EM       +   YNT+  G+ R+     A  L  E+ +R       T  
Sbjct: 550 LLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMT 609

Query: 423 TLIDGLCRYGDLEVAQQLKEN 443
             +  L   G  +  +Q+  N
Sbjct: 610 LFVKMLSDDGLDQSLKQILRN 630



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 75/151 (49%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +LL    K   + + + +   +  + L PD++  N  I  +   G    AR+++  +   
Sbjct: 470 ILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSK 529

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G++P + TY+ M++  C+ G + EA +L  EM   GC+ NG  YN +  GF RN E  +A
Sbjct: 530 GLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRA 589

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
             L+++M+  G    A +    +   S+ GL
Sbjct: 590 IQLLQEMVARGFSADASTMTLFVKMLSDDGL 620



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 55/112 (49%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F+ +   GL PDV   + +I  L   G   +A +++R M E G   +   YNT+   F 
Sbjct: 522 LFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFL 581

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
           +  E   A++LL EM  RG S +  T  + +   S +G  +  + ++R+  K
Sbjct: 582 RNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILRNGCK 633


>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 870

 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 166/550 (30%), Positives = 279/550 (50%), Gaps = 32/550 (5%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           ++  M++ G+ P+    N +I+ L ++     ARE++  M E G +P+  T   ++  FC
Sbjct: 138 LYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFC 197

Query: 255 KEGEMQEALELLWEMQGR-GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           + G  ++ALE +    G+ G + N V YN L++ F +    ++A  L+  M + GL    
Sbjct: 198 RAGRTKQALEFV---DGKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDV 254

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRG----VAPTLATYNILIYGLCKWGRVSDARH 369
            ++N  I      G + EA  +  +M   G      P + T+N+++ G C+ G + +AR 
Sbjct: 255 VTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARS 314

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
               M +      + SYNT L G  R+G + E   + DE+    + P + +YN ++DGLC
Sbjct: 315 LVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLC 374

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
           R   +  A++L + M++ G+ PD +TYT +++G C  G +  A+   NEM+RKG  P+ +
Sbjct: 375 RNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTY 434

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
              T +    K G  SEA  + ++M  K +  D +T N++V+GLC+ G LE+A+E++ +M
Sbjct: 435 TCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEM 494

Query: 550 VGDGF----------------------IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
             DG                       +PD ITYT++I+   ++G L   +  F  M+ K
Sbjct: 495 WTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAK 554

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
            L P  VTY   +     +G++  A     +M+  G    + TYN+LI GL    +I + 
Sbjct: 555 NLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEM 614

Query: 648 YGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLK 707
           YGL  +M E GI P+  TY  +IN  C  G  ++A  L  EMLD+ +     +   +L+K
Sbjct: 615 YGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIK 674

Query: 708 QLDK--DYKV 715
              K  D+KV
Sbjct: 675 AFCKSGDFKV 684



 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 177/573 (30%), Positives = 288/573 (50%), Gaps = 35/573 (6%)

Query: 162 LIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDN 221
            + G +   V+  + + L+  + K+ M ++   +  +M   GLLPDV   N  I  L   
Sbjct: 208 FVDGKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRA 267

Query: 222 GFSVKAREVYR---MMGEFGI-KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
           G   +A  ++R   M GE G+ KP++VT+N ML  FC+EG M+EA  L+  M+  G   +
Sbjct: 268 GKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVS 327

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
             +YN  + G  RNG+L + R ++ +M++ G++ + +SYN ++ G     ++++A  L +
Sbjct: 328 LESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMD 387

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
            MV+ GV P   TY  L++G C  G+V +A+    EM+RK   P+  + NTLL    + G
Sbjct: 388 LMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEG 447

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI-------- 449
              EA  +  ++  ++     VT N +++GLCR G+LE A ++   M   G         
Sbjct: 448 RKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENP 507

Query: 450 --------------LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
                         +PDVITYT ++NG CK+G L  A++ F EM+ K L PD   Y T +
Sbjct: 508 VAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFV 567

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
               K G  S A R+ ++M   G    L TYN L+ GL   G + E   L+ +M   G  
Sbjct: 568 LNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIH 627

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG-LSPTLVTYTVLIHAHAARGRLELAFM 614
           PD  TY ++I+   E G  +    L + ML KG +SP + ++ +LI A    G  ++A  
Sbjct: 628 PDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACE 687

Query: 615 YFS-EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
            F   + V G +  +  Y+ + N L    ++  A  LF    E  +L   + Y  LI++ 
Sbjct: 688 LFDVALSVCGHKEAL--YSLMFNELLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKL 745

Query: 674 CNAGNWQEALRLYKEMLDREIEPDYC-THSALL 705
           C  G   +A  L ++++D+     YC  HS+ +
Sbjct: 746 CKDGRLDDAHGLLQKLIDK----GYCFDHSSFI 774



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 139/535 (25%), Positives = 245/535 (45%), Gaps = 76/535 (14%)

Query: 107 ALRFFR--WVETQPGVKRDEFV-FCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLI 163
           A R FR   ++ + G+ +   V F  +L+   + G++  A  +VET+             
Sbjct: 273 ASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMK-----------K 321

Query: 164 GGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGF 223
           GG     VS++  +  LL   +   + +   V ++M+ NG+ P++ + N ++  L  N  
Sbjct: 322 GGNF---VSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHM 378

Query: 224 SVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNV 283
            + AR +  +M   G+ P  VTY T+L  +C +G++ EA  +L EM  +GC PN  T N 
Sbjct: 379 MLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNT 438

Query: 284 LITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG 343
           L+    + G   +A  +++ M +   ++   + N ++ G    G L +A  +  EM T G
Sbjct: 439 LLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDG 498

Query: 344 V----------------------APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
                                   P + TY  LI GLCK G++ +A+ +F EM+ KN+ P
Sbjct: 499 TNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHP 558

Query: 382 DIISYNTLLYGYCRSGNIGEA-----------------------------------FLLF 406
           D ++Y+T +  +C+ G I  A                                   + L 
Sbjct: 559 DSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLM 618

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL-PDVITYTIMVNGSCK 465
           DE+R R + P + TYN +I+ LC  G  + A  L   M+++G++ P+V ++ I++   CK
Sbjct: 619 DEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCK 678

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
            G+  +A E F+  L      +   Y+      L  G  S+A  L E  L +        
Sbjct: 679 SGDFKVACELFDVALSVCGHKEAL-YSLMFNELLAGGKLSDAKELFEASLERSLLSKNFM 737

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           Y  L+  LCK G L++A+ LL+K++  G+  DH ++  +I    + G+ ++  +L
Sbjct: 738 YEDLIDKLCKDGRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQADEL 792



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/432 (27%), Positives = 198/432 (45%), Gaps = 59/432 (13%)

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
           +L  +M+  GV P   T+N+LI  LC+   +  AR  F +M  K   P+  +   L+ G+
Sbjct: 137 SLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGF 196

Query: 394 CRSGNIGEAFLLFD---------------------------------ELRSRNLVPTVVT 420
           CR+G   +A    D                                  +  + L+P VVT
Sbjct: 197 CRAGRTKQALEFVDGKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVT 256

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGIL----PDVITYTIMVNGSCKMGNLSMAREFF 476
           +N+ I  LCR G +  A ++  +M   G L    P+V+T+ +M+ G C+ G +  AR   
Sbjct: 257 FNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLV 316

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
             M + G      +Y T + G L+ G   E   + +EM+  G  P++ +YN+++ GLC+ 
Sbjct: 317 ETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRN 376

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
             + +A  L+  MV +G  PD +TYT+++H     G +   + + N M+RKG  P   T 
Sbjct: 377 HMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTC 436

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
             L+++    GR   A     +M  K  + + +T N ++NGLCR   +++A  +  +M  
Sbjct: 437 NTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWT 496

Query: 657 EGI----------------------LPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           +G                       +P+  TYT LIN  C  G  +EA + + EM+ + +
Sbjct: 497 DGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNL 556

Query: 695 EPDYCTHSALLL 706
            PD  T+   +L
Sbjct: 557 HPDSVTYDTFVL 568



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 153/324 (47%), Gaps = 6/324 (1%)

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
           L+ ++    + P   T+N LI  LC    L+ A++L + M  +G  P+  T  I+V G C
Sbjct: 138 LYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFC 197

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
           + G    A EF +  +  G   +R  Y T ++   K     EA +L E M  KG  PD++
Sbjct: 198 RAGRTKQALEFVDGKM--GGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVV 255

Query: 525 TYNVLVHGLCKLGSLEEANELLRKMVGDGFI----PDHITYTSIIHASLEMGDLRRGRDL 580
           T+N  +  LC+ G + EA+ + R M  DG +    P+ +T+  ++    + G +   R L
Sbjct: 256 TFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSL 315

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
              M + G   +L +Y   +      G+L        EM   GI PN+ +YN +++GLCR
Sbjct: 316 VETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCR 375

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
              +  A  L   M   G+ P+  TYT L++  C+ G   EA  +  EM+ +   P+  T
Sbjct: 376 NHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYT 435

Query: 701 HSALLLKQLDKDYKVHAVEYLESL 724
            + LL     +  K  A E L+ +
Sbjct: 436 CNTLLNSLWKEGRKSEAEEMLQKM 459


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 164/555 (29%), Positives = 267/555 (48%), Gaps = 4/555 (0%)

Query: 171 VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV 230
            + ++ + LL +  + S ++     + +M   G+ PDV   N +I  L     +  A  +
Sbjct: 159 ANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLM 218

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
              M    + P   T+ T+++ F +EG ++ AL L   M   GCSP  VT NVLI G+ +
Sbjct: 219 LEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCK 278

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
            G +  A G I+  +  G +    +++  + G  + G +  AL +   M+  G  P + T
Sbjct: 279 LGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYT 338

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           Y+ +I  LC  G + +A+    +M+    +PD  ++NTL+   C    + EA  L  EL 
Sbjct: 339 YSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELT 398

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
            + L P V T+N LI+ LC+ GD  +A +L E M + G  PD +TY I+++  C  G L+
Sbjct: 399 VKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLA 458

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            A +   EM   G       Y T I G  K     EA  + ++M   G   + IT+N L+
Sbjct: 459 KALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLI 518

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
            GLC    +++A EL+ +M+ +G  P+++TY SI+    + G++ +  D+   M   G  
Sbjct: 519 DGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFE 578

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
             +VTY  LI+      R + A      M++KG++P    YN +I  L R      A  L
Sbjct: 579 VDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSL 638

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGN-WQEALRLYKEMLDREIEPDYCTHSAL---LL 706
           F +M E G  P+ +TY I+    C  G   +EA     EM D    P++ +   L   LL
Sbjct: 639 FREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGLL 698

Query: 707 KQLDKDYKVHAVEYL 721
                DY + A+E +
Sbjct: 699 NLGMDDYLIRAIELI 713



 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 154/509 (30%), Positives = 255/509 (50%), Gaps = 2/509 (0%)

Query: 194 LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE-VYRMMGEFGIKPSIVTYNTMLDS 252
           LV N++   G+  + +  N ++ VL + G  +K  E  Y  M   GI+P +VT+NT++D+
Sbjct: 147 LVSNQLDMFGVQANTEVYNHLLTVLAE-GSKIKLLESAYTEMSSQGIEPDVVTFNTVIDA 205

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
            C+  + + A+ +L EM     +P+  T+  L+ GF   G +E A  L   M ++G   +
Sbjct: 206 LCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPT 265

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
           + + N +I GY + G + +AL   ++ +  G  P   T++  + GLC+ G V  A     
Sbjct: 266 SVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLG 325

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
            ML++   PD+ +Y+T++   C +G + EA  + +++     +P   T+NTLI  LC   
Sbjct: 326 LMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTEN 385

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
            LE A  L   +  +G+ P+V T+ I++N  CK+G+  +A   F EM   G  PD   Y 
Sbjct: 386 QLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYN 445

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
             I      G  ++A  L +EM   G P   +TYN ++ GLCK   +EEA E+  +M   
Sbjct: 446 ILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVT 505

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
           G   + IT+ ++I        +    +L + M+ +GL P  VTY  ++  +  +G +  A
Sbjct: 506 GIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKA 565

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
                 M   G   +V+TY  LINGLC+ RR   A  L   M  +G+ P    Y  +I  
Sbjct: 566 ADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQS 625

Query: 673 NCNAGNWQEALRLYKEMLDREIEPDYCTH 701
                N ++AL L++EM +    PD  T+
Sbjct: 626 LFRGNNGRDALSLFREMTEVGGPPDAFTY 654



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 143/489 (29%), Positives = 239/489 (48%), Gaps = 1/489 (0%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G+ PS   Y  ++      G       L+ EM+  G           I  ++R    + A
Sbjct: 85  GLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFDDA 144

Query: 298 RGLIRDMLKL-GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
             L+ + L + G++ +   YN ++   +E   +    +   EM ++G+ P + T+N +I 
Sbjct: 145 FDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVID 204

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
            LC+  +   A     EM   +V PD  ++ TL+ G+   G+I  A  L   +      P
Sbjct: 205 ALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSP 264

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
           T VT N LI+G C+ G +  A    +  I  G  PD +T++  VNG C+ G++  A +  
Sbjct: 265 TSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVL 324

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
             ML++G +PD + Y+T I      G+  EA  +  +M+  G  PD  T+N L+  LC  
Sbjct: 325 GLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTE 384

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
             LEEA +L R++   G  P+  T+  +I+A  ++GD      LF  M   G +P  VTY
Sbjct: 385 NQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTY 444

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
            +LI    + G+L  A     EM+V G   + +TYN +I+GLC+ RRI++A  +F  M+ 
Sbjct: 445 NILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDV 504

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVH 716
            GI  N  T+  LI+  CNA    +A  L  +M+   ++P+  T++++L     +     
Sbjct: 505 TGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISK 564

Query: 717 AVEYLESLT 725
           A + L+++T
Sbjct: 565 AADILQTMT 573



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 147/489 (30%), Positives = 221/489 (45%), Gaps = 41/489 (8%)

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLW-EMQGRGCSP 276
           L D+ F +    V   +  FG++ +   YN +L +   EG   + LE  + EM  +G  P
Sbjct: 140 LFDDAFDL----VSNQLDMFGVQANTEVYNHLL-TVLAEGSKIKLLESAYTEMSSQGIEP 194

Query: 277 NGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLE 336
           + VT+N +I    R     QAR                                 A+ + 
Sbjct: 195 DVVTFNTVIDALCR---ARQAR--------------------------------TAVLML 219

Query: 337 EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS 396
           EEM +  VAP   T+  L+ G  + G +  A      M      P  ++ N L+ GYC+ 
Sbjct: 220 EEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKL 279

Query: 397 GNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
           G +G+A     +  +    P  VT++T ++GLC+ G ++ A ++   M+ +G  PDV TY
Sbjct: 280 GRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTY 339

Query: 457 TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA 516
           + ++N  C  G L  A+   N+M+  G  PD   + T I          EA  L  E+  
Sbjct: 340 STVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTV 399

Query: 517 KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
           KG  P++ T+N+L++ LCK+G    A  L  +M   G  PD +TY  +I      G L +
Sbjct: 400 KGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAK 459

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
             DL   M   G   + VTY  +I     R R+E A   F +M V GI  N IT+N LI+
Sbjct: 460 ALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLID 519

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
           GLC   RID A  L   M  EG+ PN  TY  ++   C  GN  +A  + + M     E 
Sbjct: 520 GLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEV 579

Query: 697 DYCTHSALL 705
           D  T++ L+
Sbjct: 580 DVVTYATLI 588



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 109/214 (50%)

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           EM ++G  PD++T+N ++  LC+      A  +L +M      PD  T+T+++   +E G
Sbjct: 186 EMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEG 245

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
            +     L   M   G SPT VT  VLI+ +   GR+  A  Y  +    G  P+ +T++
Sbjct: 246 SIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFS 305

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
             +NGLC+   +D A  +   M +EG  P+ YTY+ +IN  CN G  +EA  +  +M+D 
Sbjct: 306 TFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDS 365

Query: 693 EIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
              PD  T + L++    ++    A++    LT+
Sbjct: 366 GCLPDTTTFNTLIVALCTENQLEEALDLARELTV 399


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 148/540 (27%), Positives = 277/540 (51%), Gaps = 10/540 (1%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           +  + +F  MLR+  LP V + NR+  +L           + + M   GI   + T N M
Sbjct: 72  DDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIM 131

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           ++ FC+  ++  A   + ++   G  PN VT+N L+ G    G + +A  L+  M+    
Sbjct: 132 INCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMV---- 187

Query: 310 KVSAH-----SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
            +S H     + N I+ G   K  + EA++L   M+  G  P   TY  ++  +CK G  
Sbjct: 188 -LSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNT 246

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
           + A     +M  + + P +++Y  ++   C+ G + +A   F E+ ++ +   V TYN+L
Sbjct: 247 ASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSL 306

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           I   C +G  +   QL  +MI + I P+V+T++ +++   K G L+ A++ +NEM+ +G+
Sbjct: 307 IGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGI 366

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
           +P+   Y + I G        EA ++ + M++KG  PD+ TYN+L++G CK   +++   
Sbjct: 367 EPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMR 426

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           L RKM   G I D +TY+++I    +   L   + +F  M+ +G+ P ++TY +L+    
Sbjct: 427 LFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLC 486

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
             G LE A     +M    +  ++  YN +I+G+C   ++D A+ LF  +  +G+  +  
Sbjct: 487 DNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQ 546

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           +Y I+++  C   +  EA  L+++M +   EPD CT++ L+   L  +    +V+ +E +
Sbjct: 547 SYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEM 606



 Score =  254 bits (650), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 140/429 (32%), Positives = 230/429 (53%), Gaps = 1/429 (0%)

Query: 186 KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVT 245
           K  V + + +  +M+ NG  P+      I+  +  +G +  A ++ R M    IKP +VT
Sbjct: 208 KDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVT 267

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           Y  ++D+ CK+G + +AL    EM+ +G   N  TYN LI  F   G  +    L+RDM+
Sbjct: 268 YTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMI 327

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
              +  +  +++ +I    ++G L EA +L  EM+TRG+ P   TYN LIYGLC   R+ 
Sbjct: 328 TRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLD 387

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
           +A      M+ K   PDI +YN L+ G+C++  + +   LF ++  R ++   VTY+TLI
Sbjct: 388 EANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLI 447

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
            G C+   L VA+++ + M++QG+ P ++TY I+++G C  G L  A    ++M +  ++
Sbjct: 448 QGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKME 507

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
            D   Y   I G        +A+ L   + +KG   D+ +YN+++ GLCK  SL EA+ L
Sbjct: 508 LDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADAL 567

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
            RKM  DG+ PD  TY ++I A L   D+     L   M R G S    T  +++   ++
Sbjct: 568 FRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDMLSS 627

Query: 606 RGRLELAFM 614
            G L+ +F+
Sbjct: 628 -GELDKSFL 635



 Score =  229 bits (584), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 137/514 (26%), Positives = 252/514 (49%), Gaps = 35/514 (6%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
           L++++  + ++  +        K+ + G  P+    N ++  L   G   +A E+   M 
Sbjct: 128 LNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMV 187

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
                P ++T NT+++  C +  + EA++L+  M   GC PN  TY  ++    ++G   
Sbjct: 188 LSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTA 247

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
            A  L+R M    +K    +Y  II    + G L +AL+   EM T+G+   + TYN LI
Sbjct: 248 SALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLI 307

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
              C +GR  D      +M+ + + P++++++ L+    + G + EA  L++E+ +R + 
Sbjct: 308 GSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIE 367

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P  +TYN+LI GLC    L+ A Q+ + M+++G  PD+ TY I++NG CK   +      
Sbjct: 368 PNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRL 427

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
           F +M  +G+  D   Y+T I G  +      A ++ +EM+++G  P ++TY +L+ GLC 
Sbjct: 428 FRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCD 487

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
            G LEEA  +L +M                   L++G                       
Sbjct: 488 NGELEEALGILDQM-------------HKCKMELDIG----------------------I 512

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           Y ++IH      +++ A+  F  +  KG++ ++ +YN +++GLC+   + +A  LF  M+
Sbjct: 513 YNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMK 572

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           E+G  P+  TY  LI  +    +   +++L +EM
Sbjct: 573 EDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEM 606



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 223/453 (49%)

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           +Y   L S   + +  +A+ L   M      P  + +N L    +R  + +    L + M
Sbjct: 57  SYKERLRSGLVDIKKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQM 116

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
              G+    ++ N +I  +  +  L  A +   ++   G  P   T+N L+ GLC  GRV
Sbjct: 117 ELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRV 176

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            +A      M+    +PD+I+ NT++ G C    + EA  L   + +    P   TY  +
Sbjct: 177 FEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPI 236

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           ++ +C+ G+   A  L   M ++ I P V+TYTI+++  CK G L  A  FF+EM  KG+
Sbjct: 237 LNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGI 296

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
           + + F Y + I      G   +  +L  +M+ +   P+++T++ L+  L K G L EA +
Sbjct: 297 KANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKD 356

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           L  +M+  G  P+ ITY S+I+       L     + + M+ KG  P + TY +LI+   
Sbjct: 357 LYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFC 416

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
              +++     F +M ++G+  + +TY+ LI G C+ R++  A  +F +M  +G+ P   
Sbjct: 417 KAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIM 476

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           TY IL++  C+ G  +EAL +  +M   ++E D
Sbjct: 477 TYAILLDGLCDNGELEEALGILDQMHKCKMELD 509



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 71/306 (23%), Positives = 135/306 (44%), Gaps = 35/306 (11%)

Query: 33  SVHTYPSISESNNKDSVLNPESESYYKELIISTVEEKP-------WAFCNNRWVSDHFQA 85
           +V T+ ++ +S  K+  L  E++  Y E+I   +E          +  CN++ + +  Q 
Sbjct: 334 NVVTFSALIDSLVKEGKLT-EAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQM 392

Query: 86  V---VS---DPELLVR--VLNRIREKPRI--ALRFFRWVETQPGVKRDEFVFCTILEILI 135
           +   VS   DP++     ++N   +  ++   +R FR +  + G+  D   + T+++   
Sbjct: 393 MDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLR-GMIADTVTYSTLIQGFC 451

Query: 136 ESGLLRSAYWVVETVVCVNMH-GILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLL 194
           +S  L  A  V + +V   +H GI+   I           +LD L         +E+ L 
Sbjct: 452 QSRKLIVAKKVFQEMVSQGVHPGIMTYAI-----------LLDGL----CDNGELEEALG 496

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           + ++M +  +  D+   N II  + +      A  ++  +   G+K  I +YN ML   C
Sbjct: 497 ILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLC 556

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K   + EA  L  +M+  G  P+G TYN LI    R  ++  +  LI +M + G    A 
Sbjct: 557 KRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDAS 616

Query: 315 SYNPII 320
           +   ++
Sbjct: 617 TVKIVM 622


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 171/536 (31%), Positives = 272/536 (50%), Gaps = 15/536 (2%)

Query: 177 DLLLLI---YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK-VLRDNGFSVKAREVYR 232
           DL + I   Y +    EQ L +F ++   G  P V+  N ++  +L +N F +    +Y 
Sbjct: 110 DLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQM-INPLYT 168

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
            M + G+ P++ TYN +L + CK   +  A +L  EM  +GC P+ VTY  +++   + G
Sbjct: 169 NMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAG 228

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
           +++ AR L         K S   YN +I G  ++G +  A+ L  EM+  GV P + +Y+
Sbjct: 229 KIDDARELAGR-----FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYS 283

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
            +I  LC  G V  A   F +M  +    +I ++  L+ G    G + EA  L+  +   
Sbjct: 284 CIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQD 343

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
              P VV YNTLI GLC  G LE A Q+ + M   G LP+V TY+I+++G  K G+L  A
Sbjct: 344 GCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGA 403

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
            E +N M+  G +P+   YT  +    K     +A  L E+M  +G  P+ IT+N  + G
Sbjct: 404 SETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKG 463

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           LC  G +E A +LL +M G G +P+  TY  ++ A   M        LF  +  + L P 
Sbjct: 464 LCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPN 523

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL-- 650
           LVTY  +++  +  G +  A   F +  V+G  P+ ITYN +I+  C+  ++  A  L  
Sbjct: 524 LVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVE 583

Query: 651 -FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
               M+E    P+  TYT LI   CN  N +EA+    + +++ I P++ T +AL+
Sbjct: 584 RVSSMKEWH--PDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALV 637



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 148/461 (32%), Positives = 236/461 (51%), Gaps = 5/461 (1%)

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY  M++   +E EM     +L +M+  G +     +  +I G+ R G  EQA  +   +
Sbjct: 76  TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
            + G K +   YN ++     +        L   M   G+ P + TYNIL+  LCK  RV
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRV 195

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
             A   F EM  K   PD ++Y T++   C++G I +A     EL  R   P+V  YN L
Sbjct: 196 DAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDA----RELAGR-FKPSVPVYNAL 250

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           IDG+C+ G +EVA +L   M++ G+ P+V++Y+ ++N  C  GN+ +A   F +M  +G 
Sbjct: 251 IDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGC 310

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
             +   +T  I G    G   EA  L + M+  G  P+++ YN L+HGLC  GSLEEA +
Sbjct: 311 DANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQ 370

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           +  +M   G +P+  TY+ +I    + GDL    + +N M+  G  P +VTYT ++    
Sbjct: 371 VCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLC 430

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
                + A     +M ++G  PN IT+N  I GLC   R++ A  L   M+  G LPN  
Sbjct: 431 KNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNIT 490

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           TY  L++       ++EA  L++E+  R ++P+  T++ +L
Sbjct: 491 TYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVL 531



 Score = 46.2 bits (108), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 1/107 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG-FSVKAREVYRMMGEFGIKP 241
           +++  M+ + L +F K L  G  PD    N +I      G   + A+ V R+       P
Sbjct: 534 FSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHP 593

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
            I+TY +++   C    ++EA+  L +   +G  PN  T+N L+  F
Sbjct: 594 DIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCF 640



 Score = 45.8 bits (107), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 31/149 (20%), Positives = 59/149 (39%), Gaps = 35/149 (23%)

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI--------------------------- 624
           T  TY V+I        +++      +M++ GI                           
Sbjct: 73  TASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMF 132

Query: 625 --------RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNA 676
                   +P V  YN L++ L    +      L+ +M+++G++PN +TY IL+   C  
Sbjct: 133 YRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKN 192

Query: 677 GNWQEALRLYKEMLDREIEPDYCTHSALL 705
                A +L+ EM ++   PD  T++ ++
Sbjct: 193 DRVDAAHKLFVEMSNKGCPPDAVTYTTMV 221


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 155/505 (30%), Positives = 269/505 (53%), Gaps = 7/505 (1%)

Query: 203 GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           G  P + + N +I  L       +A + +  M + G +P ++ + T++  FCK G+ Q  
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML-KLGLKVSAHSYNPIIC 321
            +LL +   R   P+   Y  +I G+ + G+L+   G  R +  K  L V   SY  +I 
Sbjct: 62  HKLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDT--GYFRAVTPKASLDVI--SYTTVIK 116

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           G ++   + EA  L EE+ T G +P +  Y  +I GL K GR+ D    F EM   + +P
Sbjct: 117 GLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVP 176

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
              +Y  ++ G C++  + +A  +F+++  +  VP  +TY TLIDG  +   ++ A++L 
Sbjct: 177 TRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLL 236

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
           + M+ +G  P  +TY  +V+G CK+  ++ A+E   +M  +G +P  F +T+ ++  L  
Sbjct: 237 DVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSK 296

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
           G   EAY++  EM A+G  PD+I Y  L+  L   G + EA  +   M+  G  PD +TY
Sbjct: 297 GRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTY 356

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
            +II    ++G++    ++   M + G+ P    Y  L+  +    R++ AF  +  M  
Sbjct: 357 GTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVA 416

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDM-EEEGILPNKYTYTILINENCNAGNWQ 680
            GI+PN +T+N L++GL +  + D+A+ LF +M E+E + P   +YTILI+    AG   
Sbjct: 417 SGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVS 476

Query: 681 EALRLYKEMLDREIEPDYCTHSALL 705
           EA   ++EM+DR I P+  T+++L+
Sbjct: 477 EAFLQFQEMIDRGIIPECHTYTSLI 501



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 147/482 (30%), Positives = 239/482 (49%), Gaps = 12/482 (2%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G +P+IV+YNT++       +M EA +    M   GC P+ + +  LI GF + G+ +  
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA----TYNI 353
             L+   LK   +     Y  +I GY + G L       +    R V P  +    +Y  
Sbjct: 62  HKLLNQALKR-FRPDVFLYTSVIHGYCKAGDL-------DTGYFRAVTPKASLDVISYTT 113

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           +I GL    R+ +A   F E+      P++++Y  ++ G  ++G I +    F+E+   +
Sbjct: 114 VIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSS 173

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
            VPT  TY  +IDGLC+   L  A ++ E M+ +G +PD ITYT +++G  K   +  AR
Sbjct: 174 CVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEAR 233

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
           +  + ML KG +P    Y + + G  KL   +EA  +  +M  +G  P L  +  L+   
Sbjct: 234 KLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYY 293

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
              G  EEA ++L +M   G  PD I YTS+I      G +   R +F++M+ KG +P  
Sbjct: 294 LSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDA 353

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
           +TY  +I   +  G +E A      M   G+ P+   YN+L++G  +L R+DQA+G++  
Sbjct: 354 LTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDR 413

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDY 713
           M   GI PN  T+ +L++     G    A  L+KEML++E  P       +L+  L K  
Sbjct: 414 MVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAG 473

Query: 714 KV 715
           +V
Sbjct: 474 RV 475



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 159/543 (29%), Positives = 250/543 (46%), Gaps = 36/543 (6%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGF-SVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           FN M+ NG  PDV     +I      G   V  + + + +  F  +P +  Y +++  +C
Sbjct: 30  FNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKLLNQALKRF--RPDVFLYTSVIHGYC 87

Query: 255 KEGEMQ--------------------------------EALELLWEMQGRGCSPNGVTYN 282
           K G++                                 EA EL  E++  GCSPN V Y 
Sbjct: 88  KAGDLDTGYFRAVTPKASLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYT 147

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
            +I G  + G +E       +M       +  +Y  +I G  +  +L +A  + E+MV +
Sbjct: 148 AVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQK 207

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           G  P   TY  LI G  K  ++ +AR     ML K   P  ++Y ++++G+C+   I EA
Sbjct: 208 GCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEA 267

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
             +  ++R R   P +  + +L+      G  E A Q+   M  +G  PDVI YT +++ 
Sbjct: 268 KEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDL 327

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
               G +  AR  F+ M+ KG  PD   Y T I    K+G+   A  + E M   G  PD
Sbjct: 328 LFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPD 387

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
              YN L+ G  KL  +++A  +  +MV  G  P+ +T+  ++H   + G   R   LF 
Sbjct: 388 CFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFK 447

Query: 583 NMLRKG-LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
            ML K  + PTLV+YT+LI      GR+  AF+ F EM  +GI P   TY +LI  L + 
Sbjct: 448 EMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKA 507

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
            RI +A  L  DM + G+ P+   Y+ LI    ++     A  +++EM+ R   P+  T+
Sbjct: 508 GRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTY 567

Query: 702 SAL 704
             L
Sbjct: 568 KVL 570



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 150/536 (27%), Positives = 260/536 (48%), Gaps = 25/536 (4%)

Query: 121 KRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLL 180
           + D F++ +++    ++G L + Y+       V     LDV+     S    IK L    
Sbjct: 73  RPDVFLYTSVIHGYCKAGDLDTGYFRA-----VTPKASLDVI-----SYTTVIKGL---- 118

Query: 181 LIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIK 240
                K + E C L F ++   G  P+V     +I  L   G      + +  M      
Sbjct: 119 --ADSKRIDEACEL-FEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCV 175

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P+  TY  ++D  CK   + +A ++  +M  +GC P+ +TY  LI GFS+  ++++AR L
Sbjct: 176 PTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKL 235

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  ML  G + +A +Y  I+ G+ +  ++ EA  +  +M  RG  P L  +  L+     
Sbjct: 236 LDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLS 295

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            GR  +A     EM  +   PD+I Y +L+     +G + EA  +FD +  +   P  +T
Sbjct: 296 KGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALT 355

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y T+I    + G++E A ++ E M   G+ PD   Y  +++G  K+  +  A   ++ M+
Sbjct: 356 YGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMV 415

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK-GFPPDLITYNVLVHGLCKLGSL 539
             G++P+   +   + G  K G T  A+ L +EML K   PP L++Y +L+ GL K G +
Sbjct: 416 ASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRV 475

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
            EA    ++M+  G IP+  TYTS+I++  + G +   + L  +M++ G++P +  Y+ L
Sbjct: 476 SEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSAL 535

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           I        ++ A+  F EM  +G  PN +TY         LRR  +A G  +D+E
Sbjct: 536 ITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKV-------LRRGFRAAGRALDLE 584



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 149/310 (48%), Gaps = 4/310 (1%)

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           PT+V+YNT+I GL     ++ A +   +MI+ G  PDVI +T +++G CK G   +  + 
Sbjct: 5   PTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKL 64

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
            N+ L++  +PD F YT+ I G  K GD    Y      +      D+I+Y  ++ GL  
Sbjct: 65  LNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGYF---RAVTPKASLDVISYTTVIKGLAD 120

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
              ++EA EL  ++   G  P+ + YT++I   L+ G +  G   F  M      PT  T
Sbjct: 121 SKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTT 180

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           YTV+I        L  A   F +M  KG  P+ ITY  LI+G  +  ++D+A  L   M 
Sbjct: 181 YTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVML 240

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKV 715
            +G  P   TY  +++  C      EA  +  +M +R  EP     ++LL   L K    
Sbjct: 241 TKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAE 300

Query: 716 HAVEYLESLT 725
            A + L  +T
Sbjct: 301 EAYQVLTEMT 310


>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
          Length = 719

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 159/503 (31%), Positives = 249/503 (49%), Gaps = 4/503 (0%)

Query: 198 KMLRN--GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
           KM+R+  G +PD  +  + +K L   GF  +A EVY  + E GI+ SIV  N++L    K
Sbjct: 144 KMVRDIAGFIPDSASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLK 203

Query: 256 EGEMQEALELLWEM--QGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
            G+ +   E   EM   G     N  T   LI  F  +G++ +   L+   LK GL    
Sbjct: 204 AGKTELLFEFYQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGN 263

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
            +YN +I G+ +         +   M+ R   PT+ TY  +I GLCK     +A   F +
Sbjct: 264 PTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFND 323

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           +  +   PD + Y T+++G C  G+ GEA  L+ E+  + + P   TYNT++ G  + GD
Sbjct: 324 LKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGD 383

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
            E A +L   M N+G     +T   +++  C  G    A E F +M   G+Q D   Y +
Sbjct: 384 FERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNS 443

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            I G  K G   E   L  E++A+   P +  Y +L+   CK G  E A  LL  M   G
Sbjct: 444 LIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKG 503

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
             P+  TY +++H SL+ GD    R+L+N    KG   T  T   +I    +RG+ + A 
Sbjct: 504 LHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEAS 563

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
             F +M   GI+ + ITYN+LI G C+  ++ ++  L  ++  +G+ P+  +Y  LI + 
Sbjct: 564 EMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQL 623

Query: 674 CNAGNWQEALRLYKEMLDREIEP 696
           C  G+ + A RL+ +M+ + IEP
Sbjct: 624 CQNGDAESAKRLWGDMVSKGIEP 646



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 172/643 (26%), Positives = 285/643 (44%), Gaps = 30/643 (4%)

Query: 60  ELIISTVEEKPWAFCNNRW----VSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVE 115
           +++ +   EKP      RW    VSD      +DP L  R L   +    ++LRFF+W+ 
Sbjct: 63  KIVATITREKP------RWEQTLVSDFPSFNFADP-LFFRELVATQNNVLLSLRFFQWLC 115

Query: 116 TQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKI 175
           T      D      + E L+++  +R+A  V +              I G +    S   
Sbjct: 116 TNHDCTPDPISSNMLFEALLDAKAVRAAKMVRD--------------IAGFIPDSAS--- 158

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
           L+  +        +E+ + V+ ++   G+   +  CN I+      G +    E Y+ M 
Sbjct: 159 LEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMI 218

Query: 236 EFGI--KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           + G     +  T   ++ +FC  G++    ELL +    G  P   TYN LI GF +   
Sbjct: 219 KAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKN 278

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
                 ++  M+      + ++Y  II G  +    +EA  +  ++  RG AP    Y  
Sbjct: 279 YASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTT 338

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           +I+GLC+ G   +AR  +FEM+ K + P+  +YNT+L+G  +SG+   A  L++E+ ++ 
Sbjct: 339 MIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKG 398

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
              T VT N +I  LC  G  + A ++ + M   GI  D ITY  ++ G CK G +    
Sbjct: 399 YGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERM 458

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
              NE++ +  QP    Y   I    K GD   A RL  +M +KG  P+  TY+ ++HG 
Sbjct: 459 NLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGS 518

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
            K G  E   EL  +    G+     T   II      G      ++F  M   G+    
Sbjct: 519 LKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADA 578

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
           +TY  LI      G++  +    +E+  +G++P+  +Y +LI  LC+    + A  L+ D
Sbjct: 579 ITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGD 638

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
           M  +GI P+      LI+  C  G   E +     ML+ +I+P
Sbjct: 639 MVSKGIEPHANLREHLISGLCKQGRATEGMDRLMGMLENKIKP 681



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 119/395 (30%), Positives = 198/395 (50%), Gaps = 9/395 (2%)

Query: 179 LLLIYTKKSMV------EQCL---LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE 229
           L  IYT + ++      E+CL    VFN +   G  PD      +I  L + G   +AR+
Sbjct: 295 LPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARK 354

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           ++  M + G++P+  TYNTML    K G+ + A EL  EM  +G     VT N +I+   
Sbjct: 355 LWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELC 414

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
             G+ ++A  + + M + G++  A +YN +I G+ ++G + E +NL  E+V +   P+++
Sbjct: 415 SRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVS 474

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
            Y +LI   CK G    A+    +M  K + P+  +Y+T+L+G  +SG+      L++E 
Sbjct: 475 LYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNET 534

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
            ++    T  T N +I  LC  G  + A ++ + M   GI  D ITY  ++ G CK G +
Sbjct: 535 CNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKV 594

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             +    NE++ +GLQP   +Y + I    + GD   A RL  +M++KG  P       L
Sbjct: 595 GKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHL 654

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
           + GLCK G   E  + L  M+ +   P    +  +
Sbjct: 655 ISGLCKQGRATEGMDRLMGMLENKIKPKKAAFEDL 689



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 165/351 (47%), Gaps = 5/351 (1%)

Query: 370 RFFEMLRK--NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
           R  +M+R     IPD  S    +   C  G I EA  ++ +L+   +  ++V  N+++ G
Sbjct: 141 RAAKMVRDIAGFIPDSASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILSG 200

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTI--MVNGSCKMGNLSMAREFFNEMLRKGLQ 485
             + G  E+  +  + MI  G   D  T T+  ++   C  G ++   E  N+ L+ GL 
Sbjct: 201 CLKAGKTELLFEFYQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLD 260

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           P    Y   IAG  +  + +    +   M+A+   P + TY  +++GLCK     EA  +
Sbjct: 261 PGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRV 320

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
              +   G+ PD + YT++IH   EMG     R L+  M+ KG+ P   TY  ++H    
Sbjct: 321 FNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLK 380

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
            G  E A   ++EM  KG     +T N +I+ LC   + D+A+ +F  M E GI  +  T
Sbjct: 381 SGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAIT 440

Query: 666 YTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQL-DKDYKV 715
           Y  LI   C  G   E + L  E++ ++ +P    +  L++K   D D++ 
Sbjct: 441 YNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEA 491



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 100/218 (45%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           S+ + +LL++   K    E    +   M   GL P+    + ++     +G     RE+Y
Sbjct: 472 SVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELY 531

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
                 G   +  T N ++   C  G+  EA E+  +M   G   + +TYN LI GF + 
Sbjct: 532 NETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKE 591

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G++ ++  L+ +++  GL+ SA SY  +I    + G    A  L  +MV++G+ P     
Sbjct: 592 GKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLR 651

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTL 389
             LI GLCK GR ++   R   ML   + P   ++  L
Sbjct: 652 EHLISGLCKQGRATEGMDRLMGMLENKIKPKKAAFEDL 689


>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
 gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
          Length = 833

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 165/565 (29%), Positives = 285/565 (50%), Gaps = 40/565 (7%)

Query: 186 KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE---FGIKPS 242
           K + E   ++  +M   G  P+V + N ++K   +   + +A E+  +M +       P 
Sbjct: 244 KRLDEATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPD 303

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +V+YNT+++ F +EG++ +A  L  +M  RG  P+ VTYN +I G  +   +++A+ + +
Sbjct: 304 VVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQ 363

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            ML  G+K S  +YN +I GY   G   E + L EEM T  + P    Y +L+  LCK G
Sbjct: 364 QMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNG 423

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R ++AR+ F  ++RK + PD +              I EA  +FD++R + L P VV Y 
Sbjct: 424 RCTEARNIFDSVIRKGIKPDAM--------------IDEAVCIFDKMRQQGLSPNVVNYG 469

Query: 423 TLIDGLCRYGDL-----------------------EVAQQLKENMINQGILPDVITYTIM 459
            LID LC+ G +                       E A++L   M++QGI  DV+ +  +
Sbjct: 470 ALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTL 529

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           +   C+ G +  A+     MLR G++PD  +Y T + G    G T EA +L + M++ G 
Sbjct: 530 MCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGL 589

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
            P+  TYN L+HG CK   +++A  LLR+M+ +G  PD +TY +I+H   + G     ++
Sbjct: 590 KPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKE 649

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
           L+ NM+       + TY ++++       ++ AF  F  +  KG++ ++IT+N +I  L 
Sbjct: 650 LYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALL 709

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
           +  + + A  LF  +   G++P+  TY ++       G+ +E   L+  M +    P+  
Sbjct: 710 KGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSR 769

Query: 700 THSALLLKQLDKDYKVHAVEYLESL 724
             +AL+ + L +     A  YL  L
Sbjct: 770 MLNALVRRFLHRGDISRAGAYLSKL 794



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 154/559 (27%), Positives = 267/559 (47%), Gaps = 40/559 (7%)

Query: 195 VFNKMLR---NGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLD 251
           +F++M+R   + + PD    + +I      G       V+ ++ + G + + + +N +L 
Sbjct: 179 LFDRMVRECSDKVAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLK 238

Query: 252 SFCKEGEMQEALE-LLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK---L 307
             C    + EA   LLW M   GC+PN V+YN L+ GF      E+A  L+  M     L
Sbjct: 239 GLCDAKRLDEATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGL 298

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
                  SYN +I G+  +G + +A NL  +M+ RG+ P + TYN +I GLCK   V  A
Sbjct: 299 SCPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRA 358

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
           +  F +ML K V P   +YN L++GY  +G   E   L +E+ + +L P    Y  L+D 
Sbjct: 359 KAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDY 418

Query: 428 LCRYGDLEVAQQLKENMINQGILPD---------------------VITYTIMVNGSCKM 466
           LC+ G    A+ + +++I +GI PD                     V+ Y  +++  CK+
Sbjct: 419 LCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKL 478

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G +  A   FN+M+             ++ G   +    +A  L  EML +G   D++ +
Sbjct: 479 GRVDDAILKFNQMI------------NEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVF 526

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           N L+  LC+ G + EA  L+  M+  G  PD I+Y +++      G       L + M+ 
Sbjct: 527 NTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVS 586

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
            GL P   TY  L+H +    R++ A+    EM + G  P+V+TYN +++GL +  R  +
Sbjct: 587 IGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSE 646

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
           A  L+++M       + YTY I++N  C      EA ++++ +  + ++    T + ++ 
Sbjct: 647 AKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIG 706

Query: 707 KQLDKDYKVHAVEYLESLT 725
             L    K  A++   +++
Sbjct: 707 ALLKGGKKEDAMDLFATIS 725



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 147/521 (28%), Positives = 240/521 (46%), Gaps = 57/521 (10%)

Query: 242 SIVTYNTMLDSFCKEGEMQEALEL-----LWEMQGRGCS----PNGVTYNVLITGFSRNG 292
           S+  +N +L +  +       LE      L++   R CS    P+  TY++LI  F R G
Sbjct: 150 SVTAFNHLLTAVSRASGRHSTLESQLGISLFDRMVRECSDKVAPDRCTYSILIGCFCRMG 209

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN-LEEEMVTRGVAPTLATY 351
            LE    +   +LK G +V+   +N ++ G  +   L EA N L   M   G  P + +Y
Sbjct: 210 RLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNILLWRMPEFGCTPNVVSY 269

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVI---PDIISYNTLLYGYCRSGNIGEAFLLFDE 408
           N L+ G C   R  +A      M     +   PD++SYNT++ G+ R G + +A+ LF +
Sbjct: 270 NTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQ 329

Query: 409 LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
           +  R + P VVTYNT+IDGLC+   ++ A+ + + M+++G+ P   TY  +++G    G 
Sbjct: 330 MIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGK 389

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD------ 522
                    EM    L+PD F Y   +    K G  +EA  + + ++ KG  PD      
Sbjct: 390 WKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEA 449

Query: 523 ---------------LITYNVLVHGLCKLGSL-----------------------EEANE 544
                          ++ Y  L+  LCKLG +                       E+A E
Sbjct: 450 VCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEE 509

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           L+ +M+  G   D + + +++      G +   + L   MLR G+ P +++Y  L+  H 
Sbjct: 510 LVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHC 569

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
             GR + A      M   G++PN  TYN L++G C+ RRID AY L  +M   G  P+  
Sbjct: 570 LTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVV 629

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           TY  +++     G + EA  LY  M++   + D  T++ +L
Sbjct: 630 TYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIIL 670



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 143/518 (27%), Positives = 237/518 (45%), Gaps = 50/518 (9%)

Query: 166 GLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSV 225
           GLS    +   + ++  + ++  V++   +F +M+  G+ PDV   N +I  L       
Sbjct: 297 GLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVD 356

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           +A+ V++ M + G+KPS  TYN ++  +   G+ +E + LL EM      P+   Y +L+
Sbjct: 357 RAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLL 416

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSA--------------HSYNPIICGYSEKGLLVE 331
               +NG   +AR +   +++ G+K  A                 +P +  Y   G L++
Sbjct: 417 DYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNY---GALID 473

Query: 332 AL------------------------------NLEE---EMVTRGVAPTLATYNILIYGL 358
           AL                                EE   EM+ +G+   +  +N L+  L
Sbjct: 474 ALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDL 533

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C+ GRV +A+     MLR  V PD+ISYNTL+ G+C +G   EA  L D + S  L P  
Sbjct: 534 CREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNE 593

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
            TYNTL+ G C+   ++ A  L   M+  G  PDV+TY  +++G  + G  S A+E +  
Sbjct: 594 FTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLN 653

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M+    Q D + Y   + G  K     EA+++ + + +KG    +IT+N+++  L K G 
Sbjct: 654 MINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGK 713

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
            E+A +L   +   G +PD  TY  I    ++ G L     LF+ M   G +P       
Sbjct: 714 KEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNA 773

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
           L+     RG +  A  Y S++  K       T + LI+
Sbjct: 774 LVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLIS 811



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 15/169 (8%)

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRK---GLSPTLVTYTVLIHAHAARGRLELAFMY 615
           ++  S  H++LE    + G  LF+ M+R+    ++P   TY++LI      GRLE  F  
Sbjct: 161 VSRASGRHSTLES---QLGISLFDRMVRECSDKVAPDRCTYSILIGCFCRMGRLEHGFAV 217

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI-DMEEEGILPNKYTYTILINENC 674
           F  +   G R N I +N L+ GLC  +R+D+A  + +  M E G  PN  +Y  L+   C
Sbjct: 218 FGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNILLWRMPEFGCTPNVVSYNTLVKGFC 277

Query: 675 NAGNWQEALRLYKEMLDRE---IEPDYCTHSALL-----LKQLDKDYKV 715
           N    +EAL L   M D +     PD  +++ ++       Q+DK Y +
Sbjct: 278 NENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFREGQVDKAYNL 326



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 79/333 (23%), Positives = 142/333 (42%), Gaps = 32/333 (9%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGIL---DVLIGGGLSSCVS--- 172
           G++ D  VF T++  L   G +  A  ++E ++ V +   +   + L+ G    C++   
Sbjct: 518 GIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDG---HCLTGRT 574

Query: 173 ---IKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE 229
               K+LD+++ I  K           N+   N LL       RI     D+ +S+    
Sbjct: 575 DEAAKLLDVMVSIGLKP----------NEFTYNTLLHGYCKARRI-----DDAYSL---- 615

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
             R M   G  P +VTYNT+L    + G   EA EL   M       +  TYN+++ G  
Sbjct: 616 -LREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLC 674

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           +N  +++A  + + +   GL++   ++N +I    + G   +A++L   +   G+ P + 
Sbjct: 675 KNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVE 734

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           TY ++   L K G + +    F  M      P+    N L+  +   G+I  A     +L
Sbjct: 735 TYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKL 794

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
             +N      T + LI    R    ++A+ L E
Sbjct: 795 DEKNFSLEASTASMLISLYSRGEYQQLAKSLPE 827


>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 874

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 168/564 (29%), Positives = 283/564 (50%), Gaps = 33/564 (5%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           SI + ++LL    +++ VE    ++  M+   + P+    N +I +L D+G    ARE++
Sbjct: 111 SIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARELF 170

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M   G +P+  T+  ++  +C+ G   + LELL +M+  G  PN V YN LI+ F + 
Sbjct: 171 DKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCKE 230

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA------LNLEEEMVTRGVA 345
           G+   A  L+  M + GL     ++N  I      G ++EA      + ++EE+   G+ 
Sbjct: 231 GKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEEL---GLP 287

Query: 346 -PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
            P + TY +++ G CK G + +A+     M R     ++ SYN  L G  R+G + EA++
Sbjct: 288 HPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWI 347

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
           +  E+    + P + +YN ++DGLC+ G L  A+ L   MI  GILPD +TY+ +++G C
Sbjct: 348 VLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYC 407

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
             G +  A    +EM+     P+ +     +    K G  SEA  L ++M  KG+  D +
Sbjct: 408 SKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTV 467

Query: 525 TYNVLVHGLCKLGSLEEANELLRKM----------VGDGFI-------------PDHITY 561
           T N++++ LC  G L++A E++  M          +G+ FI             PD +TY
Sbjct: 468 TCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTY 527

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
           ++II    + G L   +  F  M+ KGL P    Y   IH+    G++  AF    +M+ 
Sbjct: 528 STIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEK 587

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
           +G    + TYN+LI GL    +I + YGL  +M E+G+ P+  TY  ++N  C  G   +
Sbjct: 588 RGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRIND 647

Query: 682 ALRLYKEMLDREIEPDYCTHSALL 705
           A  +  EML + I P+  +   L+
Sbjct: 648 APSVLDEMLQKGISPNISSFRILI 671



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 160/534 (29%), Positives = 270/534 (50%), Gaps = 26/534 (4%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +L+  Y +  +  + L +  +M   G+LP+    N +I      G +  A ++   M E 
Sbjct: 187 ILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMRED 246

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG----CSPNGVTYNVLITGFSRNGE 293
           G+ P + T+N+ + + C  G++ EA  +  +MQ         PN +TY +++ GF + G 
Sbjct: 247 GLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGM 306

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           LE+A+ L+  M +    ++  SYN  + G    G L+EA  + +EM+  G+ P + +YNI
Sbjct: 307 LEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNI 366

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           ++ GLCK G +SDAR     M+R  ++PD ++Y+TLL+GYC  G + EA  L  E+ S N
Sbjct: 367 VMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNN 426

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
             P   T N L+  L + G +  A+ L + M  +G   D +T  I++N  C  G L  A 
Sbjct: 427 CSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAI 486

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY--RLQEEMLAKGFPPDLITYNVLVH 531
           E  N M                 G   LG+   ++   + + +  K   PDL+TY+ ++ 
Sbjct: 487 EIVNGMWTH--------------GSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIIS 532

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           GLCK G L++A +   +M+  G  PD   Y + IH+    G +     +  +M ++G + 
Sbjct: 533 GLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNK 592

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
           TL TY  LI    ++ ++   +    EM+ KG+ P+V TYN ++N LC   RI+ A  + 
Sbjct: 593 TLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVL 652

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            +M ++GI PN  ++ ILI   C A +++ +  ++      EI  + C H   L
Sbjct: 653 DEMLQKGISPNISSFRILIKAFCKACDFKASHEVF------EIALNVCGHKEAL 700



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 159/580 (27%), Positives = 274/580 (47%), Gaps = 61/580 (10%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG--- 235
           L+  + K+        + +KM  +GL+P V+  N  I  L  +G  ++A  ++R M    
Sbjct: 223 LISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDE 282

Query: 236 EFGI-KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
           E G+  P+++TY  ML  FCKEG ++EA  L+  M+      N  +YN+ + G  RNG+L
Sbjct: 283 ELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKL 342

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
            +A  ++++ML +G++   +SYN ++ G  + G+L +A  L   M+  G+ P   TY+ L
Sbjct: 343 LEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTL 402

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           ++G C  G+V +A +   EM+  N  P+  + N LL+   + G I EA  L  ++  +  
Sbjct: 403 LHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGY 462

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG-----------------------ILP 451
               VT N +I+ LC  G L+ A ++   M   G                         P
Sbjct: 463 GVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTP 522

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           D++TY+ +++G CK G L  A++ F EM+ KGLQPD   Y T I    + G  S A+++ 
Sbjct: 523 DLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVL 582

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
           ++M  +G    L TYN L+ GL     + E   L+ +M   G  PD  TY  +++   E 
Sbjct: 583 KDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEG 642

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA-------HAARGRLELAF----------- 613
           G +     + + ML+KG+SP + ++ +LI A        A+    E+A            
Sbjct: 643 GRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFEIALNVCGHKEALYT 702

Query: 614 MYFSEMQVKGIRPNV----------------ITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           + F+E+ V G                       Y  LI+ LC+  +++ A  +   + ++
Sbjct: 703 LMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDK 762

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           G   +  ++  +I+     GN   A  L + M++   E +
Sbjct: 763 GYQFDPASFMPVIDGFGKMGNKHVADELAERMMEMASESN 802



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 133/457 (29%), Positives = 229/457 (50%), Gaps = 27/457 (5%)

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           P+   YNVL+    R   +E    L +DM+   +   A+++N +I    + G L +A  L
Sbjct: 110 PSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDAREL 169

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
            ++M  RG  P   T+ IL+ G C+ G  S       +M    ++P+ + YNTL+  +C+
Sbjct: 170 FDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCK 229

Query: 396 SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD-LEVAQQLKENMINQGI---LP 451
            G   +A  L D++R   LVP V T+N+ I  LC  G  LE ++  ++  I++ +    P
Sbjct: 230 EGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHP 289

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           +VITY +M+ G CK G L  A+   + M R     +  +Y   + G ++ G   EA+ + 
Sbjct: 290 NVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVL 349

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
           +EML  G  PD+ +YN+++ GLCK G L +A  L+  M+ +G +PD +TY++++H     
Sbjct: 350 KEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSK 409

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
           G +    +L + M+    SP   T  VL+H+    GR+  A     +M  KG   + +T 
Sbjct: 410 GKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTC 469

Query: 632 NALINGLCRLRRIDQAYGL------------------FIDMEEEGI-----LPNKYTYTI 668
           N +IN LC   ++D+A  +                  FI + ++ I      P+  TY+ 
Sbjct: 470 NIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYST 529

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +I+  C AG   +A + + EM+ + ++PD   +   +
Sbjct: 530 IISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFI 566



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 135/472 (28%), Positives = 217/472 (45%), Gaps = 57/472 (12%)

Query: 171 VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV 230
           ++++  ++ LL   +   + +  +V  +ML  G+ PD+ + N ++  L  NG    AR +
Sbjct: 324 INLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARML 383

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
             +M   GI P  VTY+T+L  +C +G++ EA  LL EM    CSPN  T NVL+    +
Sbjct: 384 MGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWK 443

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA----- 345
            G + +A  L++ M + G  V   + N II      G L +A+ +   M T G A     
Sbjct: 444 EGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNL 503

Query: 346 ------------------PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYN 387
                             P L TY+ +I GLCK GR+ DA+ +F EM+ K + PD   Y+
Sbjct: 504 GNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYD 563

Query: 388 TLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
           T ++ +CR G I  AF +  ++  R    T+ TYN+LI GL     +     L + M  +
Sbjct: 564 TFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREK 623

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL------ 501
           G+ PDV TY  M+N  C+ G ++ A    +EML+KG+ P+  ++   I    K       
Sbjct: 624 GVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKAS 683

Query: 502 ----------------------------GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
                                       G  +EA  L E  L + F      Y  L+  L
Sbjct: 684 HEVFEIALNVCGHKEALYTLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRL 743

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           CK   LE A+++L +++  G+  D  ++  +I    +MG+     +L   M+
Sbjct: 744 CKDEKLEAASDVLHRLIDKGYQFDPASFMPVIDGFGKMGNKHVADELAERMM 795



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 160/369 (43%), Gaps = 57/369 (15%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           ++LL    K+  + +   +  KM   G   D   CN II  L +NG   KA E+   M  
Sbjct: 435 NVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWT 494

Query: 237 FG-----------------------IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
            G                         P +VTY+T++   CK G + +A +   EM  +G
Sbjct: 495 HGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKG 554

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
             P+   Y+  I  F R G++  A  +++DM K G   +  +YN +I G   K  + E  
Sbjct: 555 LQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELY 614

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
            L +EM  +GV+P + TYN ++  LC+ GR++DA     EML+K + P+I S+  L+  +
Sbjct: 615 GLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAF 674

Query: 394 CRS----------------------------------GNIGEAFLLFDELRSRNLVPTVV 419
           C++                                  G + EA  LF+    R+      
Sbjct: 675 CKACDFKASHEVFEIALNVCGHKEALYTLMFNELLVGGKVAEAKELFETALDRSFDIGNF 734

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
            Y  LID LC+   LE A  +   +I++G   D  ++  +++G  KMGN  +A E    M
Sbjct: 735 LYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPASFMPVIDGFGKMGNKHVADELAERM 794

Query: 480 LRKGLQPDR 488
           +    + ++
Sbjct: 795 MEMASESNK 803



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 163/368 (44%), Gaps = 42/368 (11%)

Query: 395 RSGNIGEAFLLFDELRSR--NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
           +SG   +A   F  LRS      P++  YN L+    R   +E+   L ++M+   + P+
Sbjct: 87  KSGFFNKAISHFKSLRSNFPEKQPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPE 146

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
             T+ +++   C  G+L  ARE F++M  +G +P+ F +   + G  + G  S+   L  
Sbjct: 147 AYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLG 206

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           +M   G  P+ + YN L+   CK G   +A +L+ KM  DG +P   T+ S I A    G
Sbjct: 207 QMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSG 266

Query: 573 DLRRGRDLFNNML---RKGLS-PTLVTYTVLIHAHAARGRLE------------------ 610
            +     +F +M      GL  P ++TY +++      G LE                  
Sbjct: 267 KILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINL 326

Query: 611 -----------------LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
                             A++   EM   GI P++ +YN +++GLC+   +  A  L   
Sbjct: 327 ESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGL 386

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDY 713
           M   GILP+  TY+ L++  C+ G   EA  L  EM+     P+  T   +LL  L K+ 
Sbjct: 387 MIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYT-CNVLLHSLWKEG 445

Query: 714 KVHAVEYL 721
           ++   E L
Sbjct: 446 RISEAENL 453


>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 175/596 (29%), Positives = 290/596 (48%), Gaps = 69/596 (11%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  Y K   +E  L ++++M    L+PDV     I+  L  +G   +A+ V+R M E G
Sbjct: 93  LIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVG 152

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           + P+  +Y T++DS  KEG + EA  L   M  RG   + V Y  L+ G  + G    A 
Sbjct: 153 VVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAE 212

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            + + +L+  L  +  +Y+ +I G+ + G + +   L +EM  + + P +  Y+ ++ G 
Sbjct: 213 DMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGY 272

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
            K G +++A     +M+++N++P++  Y TL+ GY ++   G A  LF E++SR L    
Sbjct: 273 TKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENN 332

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
              ++ ++ L R G +E A +L ++M+++G+LPD + YT M++G  K G  S A     E
Sbjct: 333 FVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQE 392

Query: 479 MLRK----------------------------------GLQPDRFAYTTQIAGELKLGDT 504
           M  K                                  GL PD   + T I    K G+ 
Sbjct: 393 MTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNL 452

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
             A +L  EM + G  P+ IT N+LV  LC  G +E+  +LL  M+  GF P   T+ ++
Sbjct: 453 GNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAV 512

Query: 565 IHASLE-----------------------------------MGDLRRGRDLFNNMLRKGL 589
           + AS +                                   +G +RR   +F +M+ KG+
Sbjct: 513 LDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGI 572

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
              ++TY  LIH +     L+ AF   S+M  +G+ PNV TYN L+ GL   R I +A G
Sbjct: 573 LADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAG 632

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           L   M+E G++PN  TY IL++ +   GN +E ++LY EM+ +   P   T++ L+
Sbjct: 633 LVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLI 688



 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 162/609 (26%), Positives = 304/609 (49%), Gaps = 81/609 (13%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           S++  ++L+  Y +   + + + +   M   G  PD+   N ++     NGF  K  +++
Sbjct: 16  SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLM-----NGF-CKIGDLF 69

Query: 232 ---RMMGEFGI---KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
              ++MGE  +   +P+++TY T++D++CK   +++AL +  EM  +   P+ VTY  ++
Sbjct: 70  TAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIM 129

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            G  ++G++E+A+ + R+M ++G+  +  SY  +I    ++G + EA  L+  MV RG+ 
Sbjct: 130 NGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIG 189

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
             +  Y  L+ GL K G  ++A   F  +L ++++P+ ++Y+ L+ G+C+ G++ +  LL
Sbjct: 190 FDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELL 249

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
             E+  +++ P V+ Y++++DG  + G L  A  +   M+ + ILP+V  Y  +++G  K
Sbjct: 250 LQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFK 309

Query: 466 M-----------------------------------GNLSMAREFFNEMLRKGLQPDRFA 490
                                               G +  A E F +M+ +GL PDR  
Sbjct: 310 ADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVN 369

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL----------------- 533
           YT+ + G  K G  S+A+ + +EM  K    D++ YNVL++GL                 
Sbjct: 370 YTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQ 429

Query: 534 -----------------CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
                            CK G+L  A +LL +M   G  P+ IT   ++      G++ +
Sbjct: 430 LGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEK 489

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
             DL N+ML  G  PT  T+  ++ A +   R ++      ++   G++ ++ TYN LI+
Sbjct: 490 TMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLIS 549

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
             CRL  I +A  +F DM  +GIL +  TY  LI+  C + + ++A  ++ +ML   + P
Sbjct: 550 TFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSP 609

Query: 697 DYCTHSALL 705
           +  T++ LL
Sbjct: 610 NVETYNILL 618



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 139/467 (29%), Positives = 248/467 (53%), Gaps = 1/467 (0%)

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           I+ S+  +N ++D +C+ GE+  A+ELL  M+  G +P+ VTYN L+ GF + G+L  A+
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L+ ++  + L+ +  +Y  +I  Y +   L +AL + +EM  + + P + TY  ++ GL
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           CK G+V +A+  F EM    V+P+  SY TL+    + GN+ EAF+L   +  R +   V
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           V Y  L+DGL + G    A+ + + ++ + ++P+ +TY+ +++G CK+G+++       E
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M  K + P+   Y++ + G  K G  +EA  +  +M+ +   P++  Y  L+ G  K   
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQ 312

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
              A +L ++M   G   ++    S ++     G +    +LF +M+ +GL P  V YT 
Sbjct: 313 RGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTS 372

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           ++      G+   AF    EM  K    +V+ YN LINGL +L +  ++      M + G
Sbjct: 373 MMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLG 431

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           + P+  T+  +IN  C  GN   AL+L  EM    ++P+  T + L+
Sbjct: 432 LAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILV 478



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 174/674 (25%), Positives = 314/674 (46%), Gaps = 57/674 (8%)

Query: 72  AFCNNRWVSDHF--------QAVVSDPELLVRVLNRIREKPRI--ALRFFRWVETQPGVK 121
           A+C ++ + D          +++V D      ++N + +  ++  A   FR +E + GV 
Sbjct: 96  AYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREME-EVGVV 154

Query: 122 RDEFVFCTILEILIESGLLRSAYWVVETVVC-------VNMHGILDVLIGGGLSSCVSIK 174
            + F + T+++ L + G +  A+ +   +V        V    ++D L   G+++     
Sbjct: 155 PNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNA--- 211

Query: 175 ILDLLLLIYTKKSMVEQCL-------------------LVFNKMLRNGLLPDVKNCNRII 215
             + +  +  ++S+V  C+                   L+  +M    + P+V   + I+
Sbjct: 212 --EDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIV 269

Query: 216 KVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCS 275
                 G   +A +V R M +  I P++  Y T++D + K  +   AL+L  EM+ RG  
Sbjct: 270 DGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLE 329

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
            N    +  +    R+G +E+A  L +DM+  GL     +Y  ++ G+ + G   +A N+
Sbjct: 330 ENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNI 389

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRV-SDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
            +EM  +     +  YN+LI GL K G+  S++ H     L   + PD  ++NT++  YC
Sbjct: 390 AQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQL--GLAPDSATFNTMINAYC 447

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
           + GN+G A  L +E++S  L P  +T N L+  LC  G++E    L  +M+  G  P   
Sbjct: 448 KEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPT 507

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
           T+  +++ S K     +     ++++  G++ D   Y T I+   +LG    A  + ++M
Sbjct: 508 THKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDM 567

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
           + KG   D+ITYN L+HG C    L++A  +  +M+ +G  P+  TY  ++        +
Sbjct: 568 MGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLI 627

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
           +    L N M  +GL P   TY +L+  H   G ++     + EM  KG  P   TYN L
Sbjct: 628 KEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVL 687

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI------------NENCNAGNWQEA 682
           I+   + +++ QA  L  +M+  GI PN  TY ILI            N++       EA
Sbjct: 688 ISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEA 747

Query: 683 LRLYKEMLDREIEP 696
            RL++EM ++   P
Sbjct: 748 KRLFEEMNEKGFIP 761



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 220/459 (47%), Gaps = 46/459 (10%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL---------------- 218
           ++D  +    +   +E+   +F  M+  GLLPD  N   ++                   
Sbjct: 334 VIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEM 393

Query: 219 --RDNGFSVKAREV----------------YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQ 260
             + +GF V A  V                +  M + G+ P   T+NTM++++CKEG + 
Sbjct: 394 TEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLG 453

Query: 261 EALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII 320
            AL+LL EM+  G  PN +T N+L+      GE+E+   L+ DML +G   +  ++  ++
Sbjct: 454 NALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVL 513

Query: 321 CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
              S+       L++ +++V  GV   L+TYN LI   C+ G +  A   F +M+ K ++
Sbjct: 514 DASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGIL 573

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
            DII+YN L++GYC S ++ +AF +  ++ +  + P V TYN L+ GL     ++ A  L
Sbjct: 574 ADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGL 633

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
              M  +G++P+  TY I+V+G  K+GN+    + + EM+ KG  P    Y   I+   K
Sbjct: 634 VNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAK 693

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK------------ 548
               S+A  L +EM  +G PP+  TY++L+ G  KL    E N+ L++            
Sbjct: 694 GKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEE 753

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
           M   GFIP   T   I     + G     + + N + +K
Sbjct: 754 MNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLYKK 792



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 94/308 (30%), Positives = 165/308 (53%)

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
           +V  +N LIDG CR G++  A +L E M  +G  PD++TY  ++NG CK+G+L  A++  
Sbjct: 16  SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM 75

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
            E+    L+P+   YTT I    K     +A  + +EM  K   PD++TY  +++GLCK 
Sbjct: 76  GEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKS 135

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G +EEA  + R+M   G +P+  +Y ++I +  + G++     L   M+ +G+   +V Y
Sbjct: 136 GKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVY 195

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
           T L+      G    A   F  +  + + PN +TY+ALI+G C+L  +++   L  +MEE
Sbjct: 196 TALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEE 255

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVH 716
           + I PN   Y+ +++     G   EA+ + ++M+ R I P+   +  L+      D +  
Sbjct: 256 KHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGI 315

Query: 717 AVEYLESL 724
           A++  + +
Sbjct: 316 ALDLFKEM 323



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 132/273 (48%), Gaps = 26/273 (9%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           GVK D   + T++      G++R A  V +           D++  G L+  ++    + 
Sbjct: 536 GVKLDLSTYNTLISTFCRLGMIRRATLVFK-----------DMMGKGILADIIT---YNA 581

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  Y   S +++   V ++ML  G+ P+V+  N ++  L       +A  +   M E G
Sbjct: 582 LIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERG 641

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           + P+  TY+ ++    K G M+E ++L  EM  +G  P   TYNVLI+ F++  ++ QA+
Sbjct: 642 LVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAK 701

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSE------------KGLLVEALNLEEEMVTRGVAP 346
            L+++M   G+  ++ +Y+ +ICG+ +            +    EA  L EEM  +G  P
Sbjct: 702 ELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIP 761

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
              T   + + L K G+ +DA+    ++ +K V
Sbjct: 762 CENTLACISFTLAKPGKKADAQRILNKLYKKKV 794


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 191/691 (27%), Positives = 317/691 (45%), Gaps = 86/691 (12%)

Query: 89  DPELLVRVLNRIR-EKPRIALRFFRWVETQPGV--KRDEFVFCTILEILIESGLLRSAYW 145
           +PE+++ VL   R + P   L FF WV++Q     K D F F  +   L   G    A  
Sbjct: 61  NPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLAL--DLCNFGSFEKALS 118

Query: 146 VVETVVCVNMHGILDVLIGGGLSSCVSIK-----------ILDLLLLIYTKKSMVEQCLL 194
           VVE ++  N        +    SS V              +  +L   Y  K  +E+ + 
Sbjct: 119 VVERMIERNWP------VAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVF 172

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVL------------------RDNGFSVKARE------- 229
           VF+  +   L+P +  C  ++  L                  R+  F VK          
Sbjct: 173 VFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHC 232

Query: 230 -----------VYRMMGEF--------------------GIKPSIVTYNTMLDSFCKEGE 258
                      +++   EF                    G+ P   TY+ ++D  CK   
Sbjct: 233 RAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKR 292

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           +++A  LL EM   G S +  TY++LI G  +    + A+GL+ +M+  G+ +  + Y+ 
Sbjct: 293 LEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDC 352

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
            IC  S++G++ +A  L + M+  G+ P    Y  LI G C+   V        EM ++N
Sbjct: 353 CICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRN 412

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL---CRYGD-L 434
           ++    +Y T++ G C SG++  A+ +  E+ +    P VV Y TLI       R+GD +
Sbjct: 413 IVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAM 472

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
            V +++KE    QGI PD+  Y  ++ G  K   +  AR F  EM+  GL+P+ F Y   
Sbjct: 473 RVLKEMKE----QGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAF 528

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I+G ++  + + A +  +EM   G  P+ +    L++  CK G + EA    R MV  G 
Sbjct: 529 ISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGI 588

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
           + D  TYT +++   +   +    ++F  M  KG++P + +Y VLI+  +  G ++ A  
Sbjct: 589 LGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASS 648

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F EM  +G+ PNVI YN L+ G CR   I++A  L  +M  +G+ PN  TY  +I+  C
Sbjct: 649 IFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYC 708

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            +G+  EA RL+ EM  + + PD   ++ L+
Sbjct: 709 KSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 157/568 (27%), Positives = 273/568 (48%), Gaps = 46/568 (8%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDV-------------KNCNR---------- 213
           D  + + +K+ ++E+   +F+ M+ +GL+P               KN  +          
Sbjct: 351 DCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKK 410

Query: 214 ------------IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQE 261
                       ++K +  +G    A  + + M   G +P++V Y T++ +F +     +
Sbjct: 411 RNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGD 470

Query: 262 ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC 321
           A+ +L EM+ +G +P+   YN LI G S+   +++AR  + +M++ GLK +A +Y   I 
Sbjct: 471 AMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFIS 530

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           GY E      A    +EM   GV P       LI   CK G+V +A   +  M+ + ++ 
Sbjct: 531 GYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILG 590

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           D  +Y  L+ G  ++  + +A  +F E+R + + P V +Y  LI+G  + G+++ A  + 
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIF 650

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
           + M+ +G+ P+VI Y +++ G C+ G +  A+E  +EM  KGL P+   Y T I G  K 
Sbjct: 651 DEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKS 710

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL---RKMVGDGFIPDH 558
           GD +EA+RL +EM  KG  PD   Y  LV G C+L  +E A  +    +K       P  
Sbjct: 711 GDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAP-- 768

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS----PTLVTYTVLIHAHAARGRLELAFM 614
             + ++I+   + G      ++ N ++         P  VTY ++I      G LE A  
Sbjct: 769 --FNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKE 826

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F +MQ   + P VITY +L+NG  ++ R  + + +F +    GI P+   Y+++IN   
Sbjct: 827 LFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFL 886

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHS 702
             G   +AL L  +M  +    D C  S
Sbjct: 887 KEGMTTKALVLVDQMFAKNAVDDGCKLS 914



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 160/564 (28%), Positives = 273/564 (48%), Gaps = 26/564 (4%)

Query: 125 FVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSC-VSIKILDLLLLIY 183
           + + T+++ +  SG L  AY +V+ ++                S C  ++ I   L+  +
Sbjct: 418 YTYGTVVKGMCSSGDLDGAYNIVKEMIA---------------SGCRPNVVIYTTLIKTF 462

Query: 184 TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
            + S     + V  +M   G+ PD+   N +I  L       +AR     M E G+KP+ 
Sbjct: 463 LQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNA 522

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
            TY   +  + +  E   A + + EM+  G  PN V    LI  + + G++ +A    R 
Sbjct: 523 FTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRS 582

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M+  G+   A +Y  ++ G  +   + +A  +  EM  +G+AP + +Y +LI G  K G 
Sbjct: 583 MVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           +  A   F EM+ + + P++I YN LL G+CRSG I +A  L DE+  + L P  VTY T
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           +IDG C+ GDL  A +L + M  +G++PD   YT +V+G C++ ++  A   F    +KG
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKG 761

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF----PPDLITYNVLVHGLCKLGSL 539
                  +   I    K G T     +   ++   F     P+ +TYN+++  LCK G+L
Sbjct: 762 CASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNL 821

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           E A EL  +M     +P  ITYTS+++   +MG       +F+  +  G+ P  + Y+V+
Sbjct: 822 EAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVI 881

Query: 600 IHAHAARGRLELAFMYFSEMQVK-----GIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           I+A    G    A +   +M  K     G + ++ T  AL++G  ++  ++ A  +  +M
Sbjct: 882 INAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENM 941

Query: 655 EEEGILPNKYTYTILINENCNAGN 678
                +P+  T   LINE+C + N
Sbjct: 942 VRLQYIPDSATVIELINESCISSN 965



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 130/454 (28%), Positives = 205/454 (45%), Gaps = 57/454 (12%)

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           GY  KG + EA+ +    +   + P L+   +L+  L +W R+      +  M+ +NV+ 
Sbjct: 160 GYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVF 219

Query: 382 DIISYNTLLYGYCRSGNI---------------------GEAFLLFDELRSRNLVPTVVT 420
           D+ +Y+ L+  +CR+GN+                       A  L + +  + LVP   T
Sbjct: 220 DVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYT 279

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y+ LIDGLC+   LE A+ L   M + G+  D  TY+++++G  K  N   A+   +EM+
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
             G+    + Y   I    K G   +A  L + M+A G  P    Y  L+ G C+  ++ 
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           +  ELL +M     +    TY +++      GDL    ++   M+  G  P +V YT LI
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA------------- 647
                  R   A     EM+ +GI P++  YN+LI GL + +R+D+A             
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK 519

Query: 648 -----YGLFI-----------------DMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
                YG FI                 +M E G+LPNK   T LINE C  G   EA   
Sbjct: 520 PNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSA 579

Query: 686 YKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVE 719
           Y+ M+D+ I  D  T++ +L+  L K+ KV   E
Sbjct: 580 YRSMVDQGILGDAKTYT-VLMNGLFKNDKVDDAE 612


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 152/509 (29%), Positives = 263/509 (51%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K+   ++    +++ML  G+LPDV   N II  L       KA EV   M + G+ P 
Sbjct: 206 FFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPD 265

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            +TYN++L  +C  G+ +EA+  L +M+  G  P+ VTY++L+    +NG   +AR +  
Sbjct: 266 CMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFD 325

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M K GLK    +Y  ++ GY+ KG LVE   L + MV  G+ P    ++ILI      G
Sbjct: 326 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQG 385

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           +V  A   F +M ++ + P+ ++Y  ++   C+SG + +A L F+++    L P  + YN
Sbjct: 386 KVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYN 445

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           +LI GLC     E A++L   M+++GI  + I +  +++  CK G +  + + F  M+R 
Sbjct: 446 SLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRI 505

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G++P+   Y T I G    G   EA +L   M++ G  P+ +TY+ L++G CK+  +E+A
Sbjct: 506 GVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDA 565

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             L ++M   G  PD ITY  I+    +       ++L+  +   G    L TY +++H 
Sbjct: 566 LVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHG 625

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
                  + A   F  + +  ++    T+N +I+ L ++ R D+A  LF+     G++PN
Sbjct: 626 LCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 685

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLD 691
            +TY ++       G  +E  +L+  M D
Sbjct: 686 YWTYRLMAENIIGQGLLEELDQLFLSMED 714



 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 156/500 (31%), Positives = 251/500 (50%), Gaps = 3/500 (0%)

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM---QGRGCSPNGVTYNVLIT 286
           V R M E G  P++ +YN +L   C E   QEALELL  M   +G G  P+ V+Y  +I 
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           GF + G+ ++A     +ML  G+     +YN II    +   + +A+ +   MV  GV P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
              TYN +++G C  G+  +A     +M    V PD+++Y+ L+   C++G   EA  +F
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIF 324

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
           D +  R L P + TY TL+ G    G L     L + M+  GI PD   ++I++      
Sbjct: 325 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQ 384

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G +  A   F++M ++GL P+   Y   I    K G   +A    E+M+ +G  P  I Y
Sbjct: 385 GKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVY 444

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           N L+HGLC     E A EL+ +M+  G   + I + SII +  + G +     LF  M+R
Sbjct: 445 NSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVR 504

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
            G+ P ++TY  LI+ +   G+++ A    S M   G++PN +TY+ LING C++ R++ 
Sbjct: 505 IGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMED 564

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
           A  LF +ME  G+ P+  TY I++           A  LY  + +   + +  T++ +L 
Sbjct: 565 ALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILH 624

Query: 707 KQLDKDYKVHAVEYLESLTL 726
                     A++  ++L L
Sbjct: 625 GLCKNKLTDDALQMFQNLCL 644



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 155/499 (31%), Positives = 256/499 (51%), Gaps = 3/499 (0%)

Query: 194 LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE---FGIKPSIVTYNTML 250
           +V  +M   G +P+V + N ++K L D   S +A E+  MM +    G  P +V+Y T++
Sbjct: 144 IVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVI 203

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
           + F KEG+  +A     EM  RG  P+ VTYN +I    +   +++A  ++  M+K G+ 
Sbjct: 204 NGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVM 263

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
               +YN I+ GY   G   EA+   ++M + GV P + TY++L+  LCK GR  +AR  
Sbjct: 264 PDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKI 323

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
           F  M ++ + P+I +Y TLL GY   G + E   L D +    + P    ++ LI     
Sbjct: 324 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAN 383

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
            G ++ A  +   M  QG+ P+ +TY  ++   CK G +  A  +F +M+ +GL P    
Sbjct: 384 QGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIV 443

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           Y + I G         A  L  EML +G   + I +N ++   CK G + E+ +L   MV
Sbjct: 444 YNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMV 503

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
             G  P+ ITY ++I+     G +     L + M+  GL P  VTY+ LI+ +    R+E
Sbjct: 504 RIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRME 563

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
            A + F EM+  G+ P++ITYN ++ GL + RR   A  L++ + E G      TY I++
Sbjct: 564 DALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIIL 623

Query: 671 NENCNAGNWQEALRLYKEM 689
           +  C      +AL++++ +
Sbjct: 624 HGLCKNKLTDDALQMFQNL 642



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 130/435 (29%), Positives = 233/435 (53%), Gaps = 4/435 (0%)

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
           +P+  TY +LI    R G L+     + +++K G +V A ++ P++ G        +A++
Sbjct: 84  TPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMD 143

Query: 335 LE-EEMVTRGVAPTLATYNILIYGLCKWGRVSDA---RHRFFEMLRKNVIPDIISYNTLL 390
           +    M   G  P + +YNIL+ GLC   R  +A    H   +       PD++SY T++
Sbjct: 144 IVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVI 203

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
            G+ + G+  +A+  + E+  R ++P VVTYN++I  LC+   ++ A ++   M+  G++
Sbjct: 204 NGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVM 263

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
           PD +TY  +++G C  G    A  F  +M   G++PD   Y+  +    K G   EA ++
Sbjct: 264 PDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKI 323

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
            + M  +G  P++ TY  L+ G    G+L E + LL  MV +G  PDH  ++ +I A   
Sbjct: 324 FDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAN 383

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
            G + +   +F+ M ++GL+P  VTY  +I      GR+E A +YF +M  +G+ P  I 
Sbjct: 384 QGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIV 443

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           YN+LI+GLC   + ++A  L ++M + GI  N   +  +I+ +C  G   E+ +L++ M+
Sbjct: 444 YNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMV 503

Query: 691 DREIEPDYCTHSALL 705
              ++P+  T++ L+
Sbjct: 504 RIGVKPNVITYNTLI 518



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 135/442 (30%), Positives = 203/442 (45%), Gaps = 43/442 (9%)

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG---VAPTLATY 351
           E AR +  ++L+ G   S +  N  +   +       A++    M   G   V P L TY
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARDSP-AAAVSRYNRMARAGADEVTPDLCTY 90

Query: 352 NILI-----------------------------------YGLCKWGRVSDARHRFF-EML 375
            ILI                                    GLC   R SDA       M 
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL---RSRNLVPTVVTYNTLIDGLCRYG 432
               IP++ SYN LL G C      EA  L   +   R     P VV+Y T+I+G  + G
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
           D + A      M+++GILPDV+TY  ++   CK   +  A E  N M++ G+ PD   Y 
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
           + + G    G   EA    ++M + G  PD++TY++L+  LCK G   EA ++   M   
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
           G  P+  TY +++      G L     L + M+R G+ P    +++LI A+A +G+++ A
Sbjct: 331 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQA 390

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
            + FS+M+ +G+ PN +TY A+I  LC+  R++ A   F  M +EG+ P    Y  LI+ 
Sbjct: 391 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 450

Query: 673 NCNAGNWQEALRLYKEMLDREI 694
            C    W+ A  L  EMLDR I
Sbjct: 451 LCTCNKWERAEELILEMLDRGI 472



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 141/539 (26%), Positives = 249/539 (46%), Gaps = 49/539 (9%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G+  D   + +I+  L ++  +  A  V+ T+V             G +  C++    + 
Sbjct: 226 GILPDVVTYNSIIAALCKAQAMDKAMEVLNTMV-----------KNGVMPDCMT---YNS 271

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           +L  Y      ++ +    KM  +G+ PDV   + ++  L  NG  ++AR+++  M + G
Sbjct: 272 ILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRG 331

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           +KP I TY T+L  +  +G + E   LL  M   G  P+   +++LI  ++  G+++QA 
Sbjct: 332 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAM 391

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            +   M + GL  +A +Y  +I    + G + +A+   E+M+  G++P    YN LI+GL
Sbjct: 392 LVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGL 451

Query: 359 C---KW--------------------------------GRVSDARHRFFEMLRKNVIPDI 383
           C   KW                                GRV ++   F  M+R  V P++
Sbjct: 452 CTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNV 511

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
           I+YNTL+ GYC +G + EA  L   + S  L P  VTY+TLI+G C+   +E A  L + 
Sbjct: 512 ITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKE 571

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           M + G+ PD+ITY I++ G  +    + A+E +  +   G Q +   Y   + G  K   
Sbjct: 572 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKL 631

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
           T +A ++ + +       +  T+N+++  L K+G  +EA +L      +G +P++ TY  
Sbjct: 632 TDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRL 691

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
           +    +  G L     LF +M   G +        ++     RG +  A  Y S +  K
Sbjct: 692 MAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEK 750



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 133/498 (26%), Positives = 235/498 (47%), Gaps = 15/498 (3%)

Query: 103 KPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVL 162
           +P+ A+ F + + +  GV+ D   +  +++ L ++G             C+    I D +
Sbjct: 281 QPKEAIGFLKKMRSD-GVEPDVVTYSLLMDYLCKNGR------------CMEARKIFDSM 327

Query: 163 IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG 222
              GL     I     LL  Y  K  + +   + + M+RNG+ PD    + +I    + G
Sbjct: 328 TKRGLKP--EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQG 385

Query: 223 FSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYN 282
              +A  V+  M + G+ P+ VTY  ++   CK G +++A+    +M   G SP  + YN
Sbjct: 386 KVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYN 445

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
            LI G     + E+A  LI +ML  G+ ++   +N II  + ++G ++E+  L E MV  
Sbjct: 446 SLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRI 505

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           GV P + TYN LI G C  G++ +A      M+   + P+ ++Y+TL+ GYC+   + +A
Sbjct: 506 GVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDA 565

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
            +LF E+ S  + P ++TYN ++ GL +      A++L   +   G   ++ TY I+++G
Sbjct: 566 LVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHG 625

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            CK      A + F  +    L+ +   +   I   LK+G   EA  L     + G  P+
Sbjct: 626 LCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 685

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
             TY ++   +   G LEE ++L   M  +G   D      I+   L+ G++ R     +
Sbjct: 686 YWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLS 745

Query: 583 NMLRKGLSPTLVTYTVLI 600
            +  K  S    T ++ I
Sbjct: 746 MIDEKHFSLEASTASLFI 763



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 156/313 (49%), Gaps = 10/313 (3%)

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG----ILPDVITY 456
           +A  +FDEL  R    ++   N  +  + R  D   A   + N + +     + PD+ TY
Sbjct: 33  DARHVFDELLRRGRGASIYGLNRALADVAR--DSPAAAVSRYNRMARAGADEVTPDLCTY 90

Query: 457 TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ-EEML 515
            I++   C+ G L +       +++KG + D  A+T  + G      TS+A  +    M 
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 516 AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD---GFIPDHITYTSIIHASLEMG 572
             G  P++ +YN+L+ GLC     +EA ELL  M  D   G  PD ++YT++I+   + G
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
           D  +    ++ ML +G+ P +VTY  +I A      ++ A    + M   G+ P+ +TYN
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
           ++++G C   +  +A G    M  +G+ P+  TY++L++  C  G   EA +++  M  R
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330

Query: 693 EIEPDYCTHSALL 705
            ++P+  T+  LL
Sbjct: 331 GLKPEITTYGTLL 343



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 118/263 (44%), Gaps = 14/263 (5%)

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG--FPPDLITYNVL 529
           AR  F+E+LR+G     +     +A   +    +   R      A      PDL TY +L
Sbjct: 34  ARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGIL 93

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK-- 587
           +   C+ G L+     L  ++  GF  D I +T ++     +   +R  D  + +LR+  
Sbjct: 94  IGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG---LCADKRTSDAMDIVLRRMT 150

Query: 588 --GLSPTLVTYTVLIHAHAARGR----LELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
             G  P + +Y +L+       R    LEL  M  ++ +  G  P+V++Y  +ING  + 
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHM-MADDRGGGSPPDVVSYTTVINGFFKE 209

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
              D+AY  + +M + GILP+  TY  +I   C A    +A+ +   M+   + PD  T+
Sbjct: 210 GDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTY 269

Query: 702 SALLLKQLDKDYKVHAVEYLESL 724
           +++L           A+ +L+ +
Sbjct: 270 NSILHGYCSSGQPKEAIGFLKKM 292



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/249 (20%), Positives = 101/249 (40%), Gaps = 10/249 (4%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE-----VYRMMGEF 237
           Y     +++ + + + M+  GL P+    + +I     NG+   +R      +++ M   
Sbjct: 521 YCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLI-----NGYCKISRMEDALVLFKEMESS 575

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G+ P I+TYN +L    +      A EL   +   G      TYN+++ G  +N   + A
Sbjct: 576 GVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDA 635

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             + +++  + LK+ A ++N +I    + G   EA +L     + G+ P   TY ++   
Sbjct: 636 LQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAEN 695

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           +   G + +    F  M       D    N ++    + G I  A      +  ++    
Sbjct: 696 IIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLE 755

Query: 418 VVTYNTLID 426
             T +  ID
Sbjct: 756 ASTASLFID 764


>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 175/596 (29%), Positives = 290/596 (48%), Gaps = 69/596 (11%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  Y K   +E  L ++++M    L+PDV     I+  L  +G   +A+ V+R M E G
Sbjct: 93  LIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVG 152

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           + P+  +Y T++DS  KEG + EA  L   M  RG   + V Y  L+ G  + G    A 
Sbjct: 153 VVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAE 212

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            + + +L+  L  +  +Y+ +I G+ + G + +   L +EM  + + P +  Y+ ++ G 
Sbjct: 213 DMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGY 272

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
            K G +++A     +M+++N++P++  Y TL+ GY ++   G A  LF E++SR L    
Sbjct: 273 TKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENN 332

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
              ++ ++ L R G +E A +L ++M+++G+LPD + YT M++G  K G  S A     E
Sbjct: 333 FVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQE 392

Query: 479 MLRK----------------------------------GLQPDRFAYTTQIAGELKLGDT 504
           M  K                                  GL PD   + T I    K G+ 
Sbjct: 393 MTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNL 452

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
             A +L  EM + G  P+ IT N+LV  LC  G +E+  +LL  M+  GF P   T+ ++
Sbjct: 453 GNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAV 512

Query: 565 IHASLE-----------------------------------MGDLRRGRDLFNNMLRKGL 589
           + AS +                                   +G +RR   +F +M+ KG+
Sbjct: 513 LDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGI 572

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
              ++TY  LIH +     L+ AF   S+M  +G+ PNV TYN L+ GL   R I +A G
Sbjct: 573 LADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAG 632

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           L   M+E G++PN  TY IL++ +   GN +E ++LY EM+ +   P   T++ L+
Sbjct: 633 LVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLI 688



 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 162/609 (26%), Positives = 304/609 (49%), Gaps = 81/609 (13%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           S++  ++L+  Y +   + + + +   M   G  PD+   N ++     NGF  K  +++
Sbjct: 16  SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLM-----NGF-CKIGDLF 69

Query: 232 ---RMMGEFGI---KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
              ++MGE  +   +P+++TY T++D++CK   +++AL +  EM  +   P+ VTY  ++
Sbjct: 70  TAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIM 129

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            G  ++G++E+A+ + R+M ++G+  +  SY  +I    ++G + EA  L+  MV RG+ 
Sbjct: 130 NGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIG 189

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
             +  Y  L+ GL K G  ++A   F  +L ++++P+ ++Y+ L+ G+C+ G++ +  LL
Sbjct: 190 FDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELL 249

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
             E+  +++ P V+ Y++++DG  + G L  A  +   M+ + ILP+V  Y  +++G  K
Sbjct: 250 LQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFK 309

Query: 466 M-----------------------------------GNLSMAREFFNEMLRKGLQPDRFA 490
                                               G +  A E F +M+ +GL PDR  
Sbjct: 310 ADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVN 369

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL----------------- 533
           YT+ + G  K G  S+A+ + +EM  K    D++ YNVL++GL                 
Sbjct: 370 YTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQ 429

Query: 534 -----------------CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
                            CK G+L  A +LL +M   G  P+ IT   ++      G++ +
Sbjct: 430 LGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEK 489

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
             DL N+ML  G  PT  T+  ++ A +   R ++      ++   G++ ++ TYN LI+
Sbjct: 490 TMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLIS 549

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
             CRL  I +A  +F DM  +GIL +  TY  LI+  C + + ++A  ++ +ML   + P
Sbjct: 550 TFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSP 609

Query: 697 DYCTHSALL 705
           +  T++ LL
Sbjct: 610 NVETYNILL 618



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 139/467 (29%), Positives = 248/467 (53%), Gaps = 1/467 (0%)

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           I+ S+  +N ++D +C+ GE+  A+ELL  M+  G +P+ VTYN L+ GF + G+L  A+
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L+ ++  + L+ +  +Y  +I  Y +   L +AL + +EM  + + P + TY  ++ GL
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           CK G+V +A+  F EM    V+P+  SY TL+    + GN+ EAF+L   +  R +   V
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           V Y  L+DGL + G    A+ + + ++ + ++P+ +TY+ +++G CK+G+++       E
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M  K + P+   Y++ + G  K G  +EA  +  +M+ +   P++  Y  L+ G  K   
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQ 312

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
              A +L ++M   G   ++    S ++     G +    +LF +M+ +GL P  V YT 
Sbjct: 313 RGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTS 372

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           ++      G+   AF    EM  K    +V+ YN LINGL +L +  ++      M + G
Sbjct: 373 MMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLG 431

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           + P+  T+  +IN  C  GN   AL+L  EM    ++P+  T + L+
Sbjct: 432 LAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILV 478



 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 174/674 (25%), Positives = 314/674 (46%), Gaps = 57/674 (8%)

Query: 72  AFCNNRWVSDHF--------QAVVSDPELLVRVLNRIREKPRI--ALRFFRWVETQPGVK 121
           A+C ++ + D          +++V D      ++N + +  ++  A   FR +E + GV 
Sbjct: 96  AYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREME-EVGVV 154

Query: 122 RDEFVFCTILEILIESGLLRSAYWVVETVVC-------VNMHGILDVLIGGGLSSCVSIK 174
            + F + T+++ L + G +  A+ +   +V        V    ++D L   G+++     
Sbjct: 155 PNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNA--- 211

Query: 175 ILDLLLLIYTKKSMVEQCL-------------------LVFNKMLRNGLLPDVKNCNRII 215
             + +  +  ++S+V  C+                   L+  +M    + P+V   + I+
Sbjct: 212 --EDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIV 269

Query: 216 KVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCS 275
                 G   +A +V R M +  I P++  Y T++D + K  +   AL+L  EM+ RG  
Sbjct: 270 DGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLE 329

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
            N    +  +    R+G +E+A  L +DM+  GL     +Y  ++ G+ + G   +A N+
Sbjct: 330 ENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNI 389

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRV-SDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
            +EM  +     +  YN+LI GL K G+  S++ H     L   + PD  ++NT++  YC
Sbjct: 390 AQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQL--GLAPDSATFNTMINAYC 447

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
           + GN+G A  L +E++S  L P  +T N L+  LC  G++E    L  +M+  G  P   
Sbjct: 448 KEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPT 507

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
           T+  +++ S K     +     ++++  G++ D   Y T I+   +LG    A  + ++M
Sbjct: 508 THKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDM 567

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
           + KG   D+ITYN L+HG C    L++A  +  +M+ +G  P+  TY  ++        +
Sbjct: 568 MGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLI 627

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
           +    L N M  +GL P   TY +L+  H   G ++     + EM  KG  P   TYN L
Sbjct: 628 KEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVL 687

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI------------NENCNAGNWQEA 682
           I+   + +++ QA  L  +M+  GI PN  TY ILI            N++       EA
Sbjct: 688 ISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEA 747

Query: 683 LRLYKEMLDREIEP 696
            RL++EM ++   P
Sbjct: 748 KRLFEEMNEKGFIP 761



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 220/459 (47%), Gaps = 46/459 (10%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL---------------- 218
           ++D  +    +   +E+   +F  M+  GLLPD  N   ++                   
Sbjct: 334 VIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEM 393

Query: 219 --RDNGFSVKAREV----------------YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQ 260
             + +GF V A  V                +  M + G+ P   T+NTM++++CKEG + 
Sbjct: 394 TEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLG 453

Query: 261 EALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII 320
            AL+LL EM+  G  PN +T N+L+      GE+E+   L+ DML +G   +  ++  ++
Sbjct: 454 NALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVL 513

Query: 321 CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
              S+       L++ +++V  GV   L+TYN LI   C+ G +  A   F +M+ K ++
Sbjct: 514 DASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGIL 573

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
            DII+YN L++GYC S ++ +AF +  ++ +  + P V TYN L+ GL     ++ A  L
Sbjct: 574 ADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGL 633

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
              M  +G++P+  TY I+V+G  K+GN+    + + EM+ KG  P    Y   I+   K
Sbjct: 634 VNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAK 693

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK------------ 548
               S+A  L +EM  +G PP+  TY++L+ G  KL    E N+ L++            
Sbjct: 694 GKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEE 753

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
           M   GFIP   T   I     + G     + + N + +K
Sbjct: 754 MNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLYKK 792



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 94/308 (30%), Positives = 165/308 (53%)

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
           +V  +N LIDG CR G++  A +L E M  +G  PD++TY  ++NG CK+G+L  A++  
Sbjct: 16  SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM 75

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
            E+    L+P+   YTT I    K     +A  + +EM  K   PD++TY  +++GLCK 
Sbjct: 76  GEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKS 135

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G +EEA  + R+M   G +P+  +Y ++I +  + G++     L   M+ +G+   +V Y
Sbjct: 136 GKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVY 195

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
           T L+      G    A   F  +  + + PN +TY+ALI+G C+L  +++   L  +MEE
Sbjct: 196 TALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEE 255

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVH 716
           + I PN   Y+ +++     G   EA+ + ++M+ R I P+   +  L+      D +  
Sbjct: 256 KHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGI 315

Query: 717 AVEYLESL 724
           A++  + +
Sbjct: 316 ALDLFKEM 323



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 136/279 (48%), Gaps = 26/279 (9%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           GVK D   + T++      G++R A  V +           D++  G L+  ++    + 
Sbjct: 536 GVKLDLSTYNTLISTFCRLGMIRRATLVFK-----------DMMGKGILADIIT---YNA 581

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  Y   S +++   V ++ML  G+ P+V+  N ++  L       +A  +   M E G
Sbjct: 582 LIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERG 641

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           + P+  TY+ ++    K G M+E ++L  EM  +G  P   TYNVLI+ F++  ++ QA+
Sbjct: 642 LVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAK 701

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSE------------KGLLVEALNLEEEMVTRGVAP 346
            L+++M   G+  ++ +Y+ +ICG+ +            +    EA  L EEM  +G  P
Sbjct: 702 ELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIP 761

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
              T   + + L K G+ +DA+    ++ +K  + ++++
Sbjct: 762 CENTLACISFTLAKPGKKADAQRILNKLYKKKTVQELLA 800


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 191/691 (27%), Positives = 317/691 (45%), Gaps = 86/691 (12%)

Query: 89  DPELLVRVLNRIR-EKPRIALRFFRWVETQPGV--KRDEFVFCTILEILIESGLLRSAYW 145
           +PE+++ VL   R + P   L FF WV++Q     K D F F  +   L   G    A  
Sbjct: 61  NPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLAL--DLCNFGSFEKALS 118

Query: 146 VVETVVCVNMHGILDVLIGGGLSSCVSIK-----------ILDLLLLIYTKKSMVEQCLL 194
           VVE ++  N        +    SS V              +  +L   Y  K  +E+ + 
Sbjct: 119 VVERMIERNWP------VAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKEYIEEAVF 172

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVL------------------RDNGFSVKARE------- 229
           VF+  +   L+P +  C  ++  L                  R+  F VK          
Sbjct: 173 VFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHC 232

Query: 230 -----------VYRMMGEF--------------------GIKPSIVTYNTMLDSFCKEGE 258
                      +++   EF                    G+ P   TY+ ++D  CK   
Sbjct: 233 RAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKR 292

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           +++A  LL EM   G S +  TY++LI G  +    + A+GL+ +M+  G+ +  + Y+ 
Sbjct: 293 LEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDC 352

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
            IC  S++G++ +A  L + M+  G+ P    Y  LI G C+   V        EM ++N
Sbjct: 353 CICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRN 412

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL---CRYGD-L 434
           ++    +Y T++ G C SG++  A+ +  E+ +    P VV Y TLI       R+GD +
Sbjct: 413 IVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAM 472

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
            V +++KE    QGI PD+  Y  ++ G  K   +  AR F  EM+  GL+P+ F Y   
Sbjct: 473 RVLKEMKE----QGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAF 528

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I+G ++  + + A +  +EM   G  P+ +    L++  CK G + EA    R MV  G 
Sbjct: 529 ISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGI 588

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
           + D  TYT +++   +   +    ++F  M  KG++P + +Y VLI+  +  G ++ A  
Sbjct: 589 LGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASS 648

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F EM  +G+ PNVI YN L+ G CR   I++A  L  +M  +G+ PN  TY  +I+  C
Sbjct: 649 IFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYC 708

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            +G+  EA RL+ EM  + + PD   ++ L+
Sbjct: 709 KSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 157/568 (27%), Positives = 273/568 (48%), Gaps = 46/568 (8%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDV-------------KNCNR---------- 213
           D  + + +K+ ++E+   +F+ M+ +GL+P               KN  +          
Sbjct: 351 DCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKK 410

Query: 214 ------------IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQE 261
                       ++K +  +G    A  + + M   G +P++V Y T++ +F +     +
Sbjct: 411 RNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGD 470

Query: 262 ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC 321
           A+ +L EM+ +G +P+   YN LI G S+   +++AR  + +M++ GLK +A +Y   I 
Sbjct: 471 AMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFIS 530

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           GY E      A    +EM   GV P       LI   CK G+V +A   +  M+ + ++ 
Sbjct: 531 GYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILG 590

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           D  +Y  L+ G  ++  + +A  +F E+R + + P V +Y  LI+G  + G+++ A  + 
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIF 650

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
           + M+ +G+ P+VI Y +++ G C+ G +  A+E  +EM  KGL P+   Y T I G  K 
Sbjct: 651 DEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKS 710

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL---RKMVGDGFIPDH 558
           GD +EA+RL +EM  KG  PD   Y  LV G C+L  +E A  +    +K       P  
Sbjct: 711 GDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAP-- 768

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS----PTLVTYTVLIHAHAARGRLELAFM 614
             + ++I+   + G      ++ N ++         P  VTY ++I      G LE A  
Sbjct: 769 --FNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKE 826

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F +MQ   + P VITY +L+NG  ++ R  + + +F +    GI P+   Y+++IN   
Sbjct: 827 LFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFL 886

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHS 702
             G   +AL L  +M  +    D C  S
Sbjct: 887 KEGMTTKALVLVDQMFAKNAVDDGCKLS 914



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 160/564 (28%), Positives = 273/564 (48%), Gaps = 26/564 (4%)

Query: 125 FVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSC-VSIKILDLLLLIY 183
           + + T+++ +  SG L  AY +V+ ++                S C  ++ I   L+  +
Sbjct: 418 YTYGTVVKGMCSSGDLDGAYNIVKEMIA---------------SGCRPNVVIYTTLIKTF 462

Query: 184 TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
            + S     + V  +M   G+ PD+   N +I  L       +AR     M E G+KP+ 
Sbjct: 463 LQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNA 522

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
            TY   +  + +  E   A + + EM+  G  PN V    LI  + + G++ +A    R 
Sbjct: 523 FTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRS 582

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M+  G+   A +Y  ++ G  +   + +A  +  EM  +G+AP + +Y +LI G  K G 
Sbjct: 583 MVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           +  A   F EM+ + + P++I YN LL G+CRSG I +A  L DE+  + L P  VTY T
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           +IDG C+ GDL  A +L + M  +G++PD   YT +V+G C++ ++  A   F    +KG
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKG 761

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF----PPDLITYNVLVHGLCKLGSL 539
                  +   I    K G T     +   ++   F     P+ +TYN+++  LCK G+L
Sbjct: 762 CASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNL 821

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           E A EL  +M     +P  ITYTS+++   +MG       +F+  +  G+ P  + Y+V+
Sbjct: 822 EAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVI 881

Query: 600 IHAHAARGRLELAFMYFSEMQVK-----GIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           I+A    G    A +   +M  K     G + ++ T  AL++G  ++  ++ A  +  +M
Sbjct: 882 INAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENM 941

Query: 655 EEEGILPNKYTYTILINENCNAGN 678
                +P+  T   LINE+C + N
Sbjct: 942 VRLQYIPDSATVIELINESCISSN 965



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 129/454 (28%), Positives = 204/454 (44%), Gaps = 57/454 (12%)

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           GY  K  + EA+ +    +   + P L+   +L+  L +W R+      +  M+ +NV+ 
Sbjct: 160 GYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVF 219

Query: 382 DIISYNTLLYGYCRSGNI---------------------GEAFLLFDELRSRNLVPTVVT 420
           D+ +Y+ L+  +CR+GN+                       A  L + +  + LVP   T
Sbjct: 220 DVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYT 279

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y+ LIDGLC+   LE A+ L   M + G+  D  TY+++++G  K  N   A+   +EM+
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
             G+    + Y   I    K G   +A  L + M+A G  P    Y  L+ G C+  ++ 
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           +  ELL +M     +    TY +++      GDL    ++   M+  G  P +V YT LI
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA------------- 647
                  R   A     EM+ +GI P++  YN+LI GL + +R+D+A             
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK 519

Query: 648 -----YGLFI-----------------DMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
                YG FI                 +M E G+LPNK   T LINE C  G   EA   
Sbjct: 520 PNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSA 579

Query: 686 YKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVE 719
           Y+ M+D+ I  D  T++ +L+  L K+ KV   E
Sbjct: 580 YRSMVDQGILGDAKTYT-VLMNGLFKNDKVDDAE 612


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 162/518 (31%), Positives = 272/518 (52%), Gaps = 8/518 (1%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V++ + +F KM  +   P V+    I+  L ++G  ++A  ++  M E G +P+I TY  
Sbjct: 55  VDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTV 114

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           M+++ CKE +++E   +L EM  +G  P+  TYN LI G+ + G +E A+ ++  M    
Sbjct: 115 MINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNS 174

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
              +  +YN +ICG+  K  +  A+ L  +M+   + P++ TYN LI+G CK G + D+ 
Sbjct: 175 CNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYL-DSA 233

Query: 369 HRFFEMLRKN-VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
           +R   ++ +N V+PD  +Y+  +   C+ G I EA +LF+ L+ + +    V Y  LIDG
Sbjct: 234 YRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDG 293

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
            C+ G ++ A  L + M+ +  LP+  TY  +++G CK   +  A      M++KGL+  
Sbjct: 294 YCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCT 353

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              YT  I   LK GD   A+R+ ++M++ G+ PD+  Y   +H  C  G+++EA +++ 
Sbjct: 354 VPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMS 413

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
            M   G +PD +TYT +I A   +G L    D+   M   G  P+  TY+ LI  H  + 
Sbjct: 414 MMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLI-KHLLKE 472

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
             EL   Y +      I PNV  + A +  + ++ + + A  LF  M E G  PN  TY 
Sbjct: 473 --ELTKKYKNVALCDSI-PNV--FFADVADVWKMMKFETALELFEKMLEHGCSPNINTYA 527

Query: 668 ILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            LI   C  G    A +L+  M +R + P    +++LL
Sbjct: 528 KLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLL 565



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 147/479 (30%), Positives = 237/479 (49%), Gaps = 13/479 (2%)

Query: 249 MLDSFCKEGEMQEA---------LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
           M++ +CK G + EA           +   M  +GC  N V+Y  LI G    G +++   
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
           + + M +     +  +Y  I+    E G  +EA+NL  EM  RG  P + TY ++I  +C
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
           K  ++ + R    EM+ K ++P + +YN L+ GYC+ G +  A  + D + S +  P   
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
           TYN LI G CR  ++  A  L   M+   + P V+TY  +++G CK+G L  A    N M
Sbjct: 181 TYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLM 240

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
              G+ PD++ Y+  I    K G   EA  L   +  KG   + + Y  L+ G CK G +
Sbjct: 241 NENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKM 300

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           ++AN LL +M+ +  +P+  TY ++I    +   ++    L  +M++KGL  T+ TYT+L
Sbjct: 301 DDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTIL 360

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           I A    G  + A     +M   G +P+V  Y A I+  C    I +A  +   M E G+
Sbjct: 361 IVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGV 420

Query: 660 LPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSA----LLLKQLDKDYK 714
           +P+  TYT++I+     G    A  + K M D   +P + T+S     LL ++L K YK
Sbjct: 421 MPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYK 479



 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 141/444 (31%), Positives = 228/444 (51%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A  V+ MM + G + + V+Y  ++   C+ G + E + +  +M+   C P   TY V++ 
Sbjct: 23  AFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVH 82

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
               +G   +A  L  +M + G + + H+Y  +I    ++  L E   + +EMV +G+ P
Sbjct: 83  ALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVP 142

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
           ++ TYN LI G CK G V  A+     M   +  P+  +YN L+ G+CR  N+  A  L 
Sbjct: 143 SVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALL 202

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
            ++    L P+VVTYN+LI G C+ G L+ A +L   M   G++PD  TY++ ++  CK 
Sbjct: 203 SKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKK 262

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G +  A   FN +  KG++ +   YT  I G  K G   +A  L + ML +   P+  TY
Sbjct: 263 GRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTY 322

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           N L+ GLCK   ++EA  L+  M+  G      TYT +I A L+ GD      + + M+ 
Sbjct: 323 NALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVS 382

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
            G  P +  YT  IHA   RG ++ A    S M  +G+ P+ +TY  +I+    L  ++ 
Sbjct: 383 SGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNP 442

Query: 647 AYGLFIDMEEEGILPNKYTYTILI 670
           A+ +   M + G  P+ +TY+ LI
Sbjct: 443 AFDVLKRMFDTGCDPSHHTYSCLI 466



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 149/510 (29%), Positives = 241/510 (47%), Gaps = 45/510 (8%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K++ +E+   + ++M+  GL+P V   N +I      G    A+E+  +M      P+  
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TYN ++  FC++  +  A+ LL +M     +P+ VTYN LI G  + G L+ A  L    
Sbjct: 181 TYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRL---- 236

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
                                       LNL  E    GV P   TY++ I  LCK GR+
Sbjct: 237 ----------------------------LNLMNE---NGVVPDQWTYSVFIDTLCKKGRI 265

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            +A   F  +  K +  + + Y  L+ GYC++G + +A  L D + + + +P   TYN L
Sbjct: 266 EEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNAL 325

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           IDGLC+   ++ A  L E+MI +G+   V TYTI++    K G+   A    ++M+  G 
Sbjct: 326 IDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGY 385

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
           QPD + YT  I      G+  EA  +   M  +G  PD +TY +++     LG L  A +
Sbjct: 386 QPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFD 445

Query: 545 LLRKMVGDGFIPDHITYTSIIHASL--EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
           +L++M   G  P H TY+ +I   L  E+    +   L +++     +     + ++   
Sbjct: 446 VLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMM--- 502

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
                + E A   F +M   G  PN+ TY  LI GLC++ R+  A  LF  M E G+ P+
Sbjct: 503 -----KFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPS 557

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDR 692
           +  Y  L+N  C  G + +A+RL   M++ 
Sbjct: 558 EAIYNSLLNCCCELGIYGDAVRLVGAMMEH 587



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 151/541 (27%), Positives = 239/541 (44%), Gaps = 64/541 (11%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F++M   G  P++     +I  +       + R +   M E G+ PS+ TYN ++D +C
Sbjct: 96  LFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYC 155

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           KEG ++ A E+L  M    C+PN  TYN LI GF R   + +A  L+  ML+  L  S  
Sbjct: 156 KEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVV 215

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +YN +I G  + G L  A  L   M   GV P   TY++ I  LCK GR+ +A   F  +
Sbjct: 216 TYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSL 275

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY--- 431
             K +  + + Y  L+ GYC++G + +A  L D + + + +P   TYN LIDGLC+    
Sbjct: 276 KEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKV 335

Query: 432 --------------------------------GDLEVAQQLKENMINQGILPDVITYTIM 459
                                           GD + A ++ + M++ G  PDV  YT  
Sbjct: 336 QEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAF 395

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           ++  C  GN+  A +  + M  +G+ PD   YT  I     LG  + A+ + + M   G 
Sbjct: 396 IHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGC 455

Query: 520 PPDLITYNVLVH--------------GLC---------------KLGSLEEANELLRKMV 550
            P   TY+ L+                LC               K+   E A EL  KM+
Sbjct: 456 DPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKML 515

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
             G  P+  TY  +I    ++G L   + LF++M  +G+SP+   Y  L++     G   
Sbjct: 516 EHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYG 575

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
            A      M   G  P + + N L  GL      ++A  +F ++ + G   ++  + ILI
Sbjct: 576 DAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILI 635

Query: 671 N 671
           +
Sbjct: 636 D 636



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 140/492 (28%), Positives = 226/492 (45%), Gaps = 6/492 (1%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  + +K  V + + + +KML + L P V   N +I      G+   A  +  +M E G
Sbjct: 185 LICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENG 244

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           + P   TY+  +D+ CK+G ++EA  L   ++ +G   N V Y  LI G+ + G+++ A 
Sbjct: 245 VVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDAN 304

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L+  ML      ++ +YN +I G  ++  + EAL L E M+ +G+  T+ TY ILI  +
Sbjct: 305 SLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAM 364

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
            K G    A     +M+     PD+  Y   ++ +C  GNI EA  +   +  R ++P  
Sbjct: 365 LKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDA 424

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           +TY  +ID     G L  A  + + M + G  P   TY+ ++    K     + +++ N 
Sbjct: 425 LTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKE---ELTKKYKNV 481

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
            L   +    FA    +A   K+     A  L E+ML  G  P++ TY  L+ GLCK+G 
Sbjct: 482 ALCDSIPNVFFA---DVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGR 538

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           L  A +L   M   G  P    Y S+++   E+G       L   M+  G  P L +  V
Sbjct: 539 LGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNV 598

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           L       G  E A + FS +   G   + + +  LI+GL +    D    L   ME  G
Sbjct: 599 LFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARG 658

Query: 659 ILPNKYTYTILI 670
              +  TY +LI
Sbjct: 659 CQIHPQTYRMLI 670



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 142/551 (25%), Positives = 237/551 (43%), Gaps = 78/551 (14%)

Query: 158 ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
           ILD ++  GL    S+   + L+  Y K+ MVE    + + M  N   P+ +  N +I  
Sbjct: 131 ILDEMVEKGLVP--SVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELI-- 186

Query: 218 LRDNGFSVKAREVYRMMG------EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
               GF  K + V+R M       E  + PS+VTYN+++   CK G +  A  LL  M  
Sbjct: 187 ---CGFCRK-KNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNE 242

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
            G  P+  TY+V I    + G +E+A  L   + + G+K +   Y  +I GY + G + +
Sbjct: 243 NGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDD 302

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
           A +L + M+T    P  +TYN LI GLCK  +V +A      M++K +   + +Y  L+ 
Sbjct: 303 ANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIV 362

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
              + G+   A  + D++ S    P V  Y   I   C  G+++ A+ +   M  +G++P
Sbjct: 363 AMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMP 422

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK----------- 500
           D +TYT++++    +G L+ A +    M   G  P    Y+  I   LK           
Sbjct: 423 DALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVA 482

Query: 501 ---------LGDTSEAYRLQ---------EEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
                      D ++ +++          E+ML  G  P++ TY  L+ GLCK+G L  A
Sbjct: 483 LCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVA 542

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMG------------------------------ 572
            +L   M   G  P    Y S+++   E+G                              
Sbjct: 543 QKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCG 602

Query: 573 -----DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
                   + + +F+N+L+ G +   V + +LI      G  +        M+ +G + +
Sbjct: 603 LYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIH 662

Query: 628 VITYNALINGL 638
             TY  LI GL
Sbjct: 663 PQTYRMLIEGL 673



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 105/423 (24%), Positives = 188/423 (44%), Gaps = 32/423 (7%)

Query: 117 QPGVKRDEFVFCTILEILIESGLLRSAYWVVETVV---CVNMHGILDVLIGGGLSSCVSI 173
           + G+K +E ++  +++   ++G +  A  +++ ++   C+      + LI G        
Sbjct: 277 EKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDG-------- 328

Query: 174 KILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRM 233
                      K+  V++ LL+   M++ GL   V     +I  +   G    A  +   
Sbjct: 329 ---------LCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQ 379

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M   G +P +  Y   + +FC  G ++EA +++  M  RG  P+ +TY ++I  +   G 
Sbjct: 380 MVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGL 439

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           L  A  +++ M   G   S H+Y+ +I     K LL E L  +     + VA   +  N+
Sbjct: 440 LNPAFDVLKRMFDTGCDPSHHTYSCLI-----KHLLKEELTKK----YKNVALCDSIPNV 490

Query: 354 L---IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
               +  + K  +   A   F +ML     P+I +Y  L+ G C+ G +G A  LFD + 
Sbjct: 491 FFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMN 550

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
            R + P+   YN+L++  C  G    A +L   M+  G LP + +  ++  G  + G+  
Sbjct: 551 ERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKE 610

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            A+  F+ +L+ G   D  A+   I G LK G +     L   M A+G      TY +L+
Sbjct: 611 KAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLI 670

Query: 531 HGL 533
            GL
Sbjct: 671 EGL 673


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 151/471 (32%), Positives = 249/471 (52%)

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
           + M   GI P +VT + +++ FC  G+M  +  +L ++   G  PN +  N L+ G    
Sbjct: 34  KQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLK 93

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           GE++++      ++  G ++   SY  ++ G  + G    A+ L   +  R   P +  Y
Sbjct: 94  GEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMY 153

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           + +I GLCK   V +A   + EM  + + PD+I+Y TL+ G+C +G + EAF L +E+  
Sbjct: 154 STIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMIL 213

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           +N+ P + TYNTLID LC+ G ++ ++ L   M  +G+ PDV+ Y+I+++G C +G +  
Sbjct: 214 KNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQK 273

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A++ F  M++ G+ PD ++Y   I G  K     EA  L  EML K   PD +TY+ L+ 
Sbjct: 274 AKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLID 333

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           GLCKLG +    +L ++M   G   + +TY S++    +  +L +   LF  M  +G+ P
Sbjct: 334 GLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQP 393

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
              TYT LI      GRL+     F  + VKG   +V TY  +I+GLC+    D+A  + 
Sbjct: 394 NKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMK 453

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
             ME+ G +PN  T+ I+I          +A +L  EM+ + + P    HS
Sbjct: 454 SKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLPFRNFHS 504



 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 148/484 (30%), Positives = 257/484 (53%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P I+ +  +L S  K       + L  +M+ +G  P+ VT ++LI  F   G++  +  +
Sbjct: 8   PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  +LKLG + +    N ++ G   KG + ++L+  +++V +G      +Y IL+ GLCK
Sbjct: 68  LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G    A      +  ++  PD++ Y+T++ G C+   + EA+ L+ E+ +R + P V+T
Sbjct: 128 IGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVIT 187

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y TLI G C  G L  A  L   MI + I P++ TY  +++  CK G +  ++     M 
Sbjct: 188 YTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMT 247

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           +KG++PD   Y+  + G   +G+  +A ++   M+  G  PD+ +YN++++GLCK   ++
Sbjct: 248 KKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVD 307

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA  LLR+M+    IPD +TY+S+I    ++G +    DL   M  +G    LVTY  L+
Sbjct: 308 EAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLL 367

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                   L+ A   F +M+ +GI+PN  TY ALI+GLC+  R+ +   LF  +  +G  
Sbjct: 368 DGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYC 427

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
            + +TYT++I+  C  G + EAL +  +M D    P+  T   ++   L+KD    A + 
Sbjct: 428 IDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKL 487

Query: 721 LESL 724
           L  +
Sbjct: 488 LHEM 491



 Score =  255 bits (651), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 150/464 (32%), Positives = 246/464 (53%)

Query: 198 KMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG 257
           +M   G++PD+   + +I      G    +  V   + + G +P+ +  NT++   C +G
Sbjct: 35  QMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKG 94

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
           E++++L    ++  +G   + V+Y +L+ G  + GE   A  L+R +     +     Y+
Sbjct: 95  EVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYS 154

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            II G  +  L+ EA +L  EM  RG+ P + TY  LI G C  G++ +A     EM+ K
Sbjct: 155 TIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILK 214

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
           N+ P+I +YNTL+   C+ G + E+  L   +  + + P VV Y+ L+DG C  G+++ A
Sbjct: 215 NINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKA 274

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
           +Q+   M+  G+ PDV +Y I++NG CK   +  A     EML K + PD   Y++ I G
Sbjct: 275 KQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDG 334

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
             KLG  +    L +EM  +G P +L+TYN L+ GLCK  +L++A  L  KM   G  P+
Sbjct: 335 LCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPN 394

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
             TYT++I    + G L++G+ LF ++L KG    + TYTV+I      G  + A    S
Sbjct: 395 KYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKS 454

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
           +M+  G  PN +T+  +I  L      D+A  L  +M  +G+LP
Sbjct: 455 KMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498



 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 142/438 (32%), Positives = 239/438 (54%), Gaps = 8/438 (1%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           IL+ L+     K  V++ L   +K++  G   D  +   ++  L   G +  A ++ R +
Sbjct: 82  ILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTI 141

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
            +   +P +V Y+T++D  CK+  + EA +L  EM  RG  P+ +TY  LI GF   G+L
Sbjct: 142 EDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQL 201

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
            +A GL+ +M+   +  + ++YN +I    ++G + E+ NL   M  +GV P +  Y+IL
Sbjct: 202 MEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSIL 261

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           + G C  G V  A+  F  M++  V PD+ SYN ++ G C+   + EA  L  E+  +N+
Sbjct: 262 MDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNM 321

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
           +P  VTY++LIDGLC+ G +     L + M ++G   +++TY  +++G CK  NL  A  
Sbjct: 322 IPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIA 381

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
            F +M  +G+QP+++ YT  I G  K G   +   L + +L KG+  D+ TY V++ GLC
Sbjct: 382 LFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLC 441

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP--- 591
           K G  +EA  +  KM  +G IP+ +T+  II + LE  +  +   L + M+ KGL P   
Sbjct: 442 KEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLPFRN 501

Query: 592 -----TLVTYTVLIHAHA 604
                + VT  V+++ H+
Sbjct: 502 FHSERSSVTNKVIVNFHS 519



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 222/432 (51%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V  K+L+ G  P+    N ++K L   G   K+   +  +   G +   V+Y  +L+  C
Sbjct: 67  VLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLC 126

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K GE + A++LL  ++ R   P+ V Y+ +I G  ++  +++A  L  +M   G+     
Sbjct: 127 KIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVI 186

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +Y  +ICG+   G L+EA  L  EM+ + + P + TYN LI  LCK G+V ++++    M
Sbjct: 187 TYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVM 246

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
            +K V PD++ Y+ L+ GYC  G + +A  +F  +    + P V +YN +I+GLC+   +
Sbjct: 247 TKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRV 306

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A  L   M+++ ++PD +TY+ +++G CK+G ++   +   EM  +G   +   Y + 
Sbjct: 307 DEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSL 366

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           + G  K  +  +A  L  +M  +G  P+  TY  L+ GLCK G L++   L + ++  G+
Sbjct: 367 LDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGY 426

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
             D  TYT +I    + G       + + M   G  P  VT+ ++I +   +   + A  
Sbjct: 427 CIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEK 486

Query: 615 YFSEMQVKGIRP 626
              EM  KG+ P
Sbjct: 487 LLHEMIAKGLLP 498



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 93/326 (28%), Positives = 172/326 (52%)

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
           IP II +  +L    +  +      L  ++ ++ +VP +VT + LI+  C  G +  +  
Sbjct: 7   IPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFS 66

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           +   ++  G  P+ I    ++ G C  G +  +  F ++++ +G Q D+ +Y   + G  
Sbjct: 67  VLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLC 126

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           K+G+T  A +L   +  +   PD++ Y+ ++ GLCK   ++EA +L  +M   G  PD I
Sbjct: 127 KIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVI 186

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
           TYT++I      G L     L N M+ K ++P + TY  LI      G+++ +    + M
Sbjct: 187 TYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVM 246

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
             KG++P+V+ Y+ L++G C +  + +A  +F+ M + G+ P+ Y+Y I+IN  C     
Sbjct: 247 TKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRV 306

Query: 680 QEALRLYKEMLDREIEPDYCTHSALL 705
            EA+ L +EML + + PD  T+S+L+
Sbjct: 307 DEAMNLLREMLHKNMIPDTVTYSSLI 332


>gi|255569207|ref|XP_002525572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223535151|gb|EEF36831.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 687

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 166/552 (30%), Positives = 290/552 (52%), Gaps = 24/552 (4%)

Query: 180 LLIYTKKSMVEQCLLVFNKMLRN--GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +L+Y K++     L++F  ++RN  G + + + C+ + K++ D GF  K  E        
Sbjct: 135 ILVYGKRNYRVMDLILF--LVRNIGGAVGEEELCDLLFKLVYDTGFGTKDLET------- 185

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
                   Y+ ++D +  E ++  AL L+ E++     P+    N L+    R+ +L+ A
Sbjct: 186 -------VYSMLVDCYVTESKVSLALNLIHEIKLLNIFPSMGVCNSLLKALLRSHQLDLA 238

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             ++  M   G+ ++A   +  I  Y  +G +     +  EM   G+   +  Y I+I  
Sbjct: 239 WDILEGMQSFGMHLNASILSLFIESYCAEGNIQSGWKILMEMKNYGIKADVIAYTIVIDA 298

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           LCK   V  A    F+M+   +  D +S ++++ GYC+ G   +A  L +    R   P 
Sbjct: 299 LCKISCVKVATSLLFKMIHCGISVDSVSVSSVIDGYCKKGRSDKAINLLNFFNVR---PN 355

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           +  Y++ +  LC+ G++  A +  + M   G+ PD   YTI++ G CK+G+++ A ++  
Sbjct: 356 IFVYSSFMTKLCKDGNMLEASKTFQEMSEFGLYPDCFCYTIIIGGYCKVGDINKAFQYLG 415

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           EML+ G+ P    YT  I    K GD + A  L + M+ +G  PD++T+N L+ G  K G
Sbjct: 416 EMLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQRMMLEGLIPDVVTFNCLIDGFGKKG 475

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            L++A ELL  M   G  PD +TY ++IH+ +  G     +D+ + ++R+GLSP ++T+T
Sbjct: 476 YLQKAFELLDIMRSAGMSPDTVTYNALIHSLIARGYPNEAKDILHELIRRGLSPDVMTFT 535

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
            +I   + +G  E AF+ +S M  + ++P+V+T +AL+NG CR RR+D+A  LF+ M + 
Sbjct: 536 DVIDGFSKKGNFEEAFLVWSYMSERHVKPDVVTCSALLNGYCRARRMDEANALFLKMLDA 595

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL---KQLDKDYK 714
           G+ P+   Y  LI+  C+AGN   A  L   M+D    P+  TH A  L   K+  K+ +
Sbjct: 596 GLKPDLVLYNNLIHGFCSAGNMNAACNLVAMMIDDGFLPNITTHRAFALGFEKKWVKNPE 655

Query: 715 VHAVEYLESLTL 726
           +HA   L+ + L
Sbjct: 656 LHASLKLKQILL 667



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 156/584 (26%), Positives = 276/584 (47%), Gaps = 28/584 (4%)

Query: 71  WAF-CNNRWVSDHFQAVVSDPELLVRVLNRI---REKPRIALRFFRWVETQPGVKRDEFV 126
           W+  C+ R+++D  Q  V      + VLN +         AL FFR  +   G++     
Sbjct: 75  WSLGCSTRFITDLSQVSV------LGVLNDLFGESFNAAFALYFFRLSQCCSGLEHTIRS 128

Query: 127 FCTILEILIESGLLRSAYWVVETVVCV--NMHG------ILDVLIGGGLSSCVSIKILD- 177
            C ++ IL+     +  Y V++ ++ +  N+ G      + D+L      +    K L+ 
Sbjct: 129 LCRLIHILVYG---KRNYRVMDLILFLVRNIGGAVGEEELCDLLFKLVYDTGFGTKDLET 185

Query: 178 ---LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
              +L+  Y  +S V   L + +++    + P +  CN ++K L  +     A ++   M
Sbjct: 186 VYSMLVDCYVTESKVSLALNLIHEIKLLNIFPSMGVCNSLLKALLRSHQLDLAWDILEGM 245

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
             FG+  +    +  ++S+C EG +Q   ++L EM+  G   + + Y ++I    +   +
Sbjct: 246 QSFGMHLNASILSLFIESYCAEGNIQSGWKILMEMKNYGIKADVIAYTIVIDALCKISCV 305

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           + A  L+  M+  G+ V + S + +I GY +KG   +A+NL      R   P +  Y+  
Sbjct: 306 KVATSLLFKMIHCGISVDSVSVSSVIDGYCKKGRSDKAINLLNFFNVR---PNIFVYSSF 362

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           +  LCK G + +A   F EM    + PD   Y  ++ GYC+ G+I +AF    E+    +
Sbjct: 363 MTKLCKDGNMLEASKTFQEMSEFGLYPDCFCYTIIIGGYCKVGDINKAFQYLGEMLKFGI 422

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P+V TY  LI+  C+ GD+ +A+ L + M+ +G++PDV+T+  +++G  K G L  A E
Sbjct: 423 TPSVTTYTLLINACCKSGDMAMAEYLLQRMMLEGLIPDVVTFNCLIDGFGKKGYLQKAFE 482

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
             + M   G+ PD   Y   I   +  G  +EA  +  E++ +G  PD++T+  ++ G  
Sbjct: 483 LLDIMRSAGMSPDTVTYNALIHSLIARGYPNEAKDILHELIRRGLSPDVMTFTDVIDGFS 542

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           K G+ EEA  +   M      PD +T +++++       +     LF  ML  GL P LV
Sbjct: 543 KKGNFEEAFLVWSYMSERHVKPDVVTCSALLNGYCRARRMDEANALFLKMLDAGLKPDLV 602

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
            Y  LIH   + G +  A    + M   G  PN+ T+ A   G 
Sbjct: 603 LYNNLIHGFCSAGNMNAACNLVAMMIDDGFLPNITTHRAFALGF 646


>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
          Length = 1765

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 160/504 (31%), Positives = 250/504 (49%), Gaps = 35/504 (6%)

Query: 203  GLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMG-----------------------EFG 238
            G LP+V +CNR++K+L +      AR++Y  M+G                       E G
Sbjct: 1107 GSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEG 1166

Query: 239  IK-----------PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITG 287
            +K           P +V YN ++D +C+ G+M   L LL EM+ +G  P  VTY  LI  
Sbjct: 1167 LKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINW 1226

Query: 288  FSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPT 347
              + G+LE+   L  +M K G   +   YN +I    +     +A+ + ++M   G  P 
Sbjct: 1227 LGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPD 1286

Query: 348  LATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFD 407
            + T+N LI GLC  G V  A H   E +R+ + P+ +SY  L++G+C  G +  A  L  
Sbjct: 1287 IITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLV 1346

Query: 408  ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG 467
            E+  R   P VVT+  LI GL   G +  A  ++E M  + + PDV  Y ++++G CK  
Sbjct: 1347 EMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKR 1406

Query: 468  NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
             L  A+    EML K +QPD F Y T I G ++  +  +A ++ E M  KG  PD+++ N
Sbjct: 1407 MLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCN 1466

Query: 528  VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
             ++ G C+ G + EA   +  M   G IPD  TYT++I    + G+L        +M+++
Sbjct: 1467 AMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKR 1526

Query: 588  GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
               P +VTY+ LI+ +   G  + A   F+ MQ + + PNV+TY  LI  L +  ++ +A
Sbjct: 1527 KCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRA 1586

Query: 648  YGLFIDMEEEGILPNKYTYTILIN 671
               F  M      PN  T   L+N
Sbjct: 1587 GLYFETMLLNHCSPNDVTLHYLVN 1610



 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 162/563 (28%), Positives = 275/563 (48%), Gaps = 32/563 (5%)

Query: 177  DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
            ++L+  Y ++  + + LL+  +M   G LP +     +I  L   G   K   ++  M +
Sbjct: 1186 NVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRK 1245

Query: 237  FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
             G  P++  YN+++D+ CK     +A+ +L +M   GC P+ +T+N LITG    G + +
Sbjct: 1246 RGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRK 1305

Query: 297  ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
            A   +R+ ++  L  +  SY P+I G+  +G L+ A +L  EM+ RG  P + T+  LI+
Sbjct: 1306 AEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIH 1365

Query: 357  GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
            GL   G+VS+A     +M  + V PD+  YN L+ G C+   +  A  + +E+  +N+ P
Sbjct: 1366 GLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQP 1425

Query: 417  TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
                Y TLIDG  R  +L  A+++ E M ++GI PD+++   M+ G C+ G +S A    
Sbjct: 1426 DEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCM 1485

Query: 477  NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
            + M + G  PD F YTT I+G  K G+ + A R   +M+ +   P+++TY+ L++G CK 
Sbjct: 1486 SNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKT 1545

Query: 537  GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
            G  + A  L   M  +   P+ +TYT +I +  +   + R    F  ML    SP  VT 
Sbjct: 1546 GDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTL 1605

Query: 597  TVLIHAHAA----------------RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
              L++   +                 G+  L  + F ++      P    YNA+I  LCR
Sbjct: 1606 HYLVNGLTSCTPCVINSICCNTSEVHGKDAL-LVVFKKLVFDIGDPRNSAYNAIIFSLCR 1664

Query: 641  LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG---NWQ------------EALRL 685
               + +A      M ++G +PN  T+  L+   C+ G   NW+            E +  
Sbjct: 1665 HNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSVNWRTILPNEFQQEEFEIIFR 1724

Query: 686  YKEMLDREIEPDYCTHSALLLKQ 708
            YK + D+      C   + +L+Q
Sbjct: 1725 YKFLFDQYATESVCCEVSRVLQQ 1747



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 133/452 (29%), Positives = 212/452 (46%), Gaps = 15/452 (3%)

Query: 172  SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
            +++I + ++    K     Q +++  +M  +G  PD+   N +I  L   G   KA    
Sbjct: 1251 NVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFL 1310

Query: 232  RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
            R      + P+ ++Y  ++  FC  GE+  A +LL EM GRG +P+ VT+  LI G    
Sbjct: 1311 REAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVA 1370

Query: 292  GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
            G++ +A  +   M +  +    + YN +I G  +K +L  A N+ EEM+ + V P    Y
Sbjct: 1371 GKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVY 1430

Query: 352  NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
              LI G  +   + DAR  F  M  K + PDI+S N ++ GYC+ G + EA L    +R 
Sbjct: 1431 ATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRK 1490

Query: 412  RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
               +P   TY T+I G  + G+L  A +   +MI +   P+V+TY+ ++NG CK G+   
Sbjct: 1491 VGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDF 1550

Query: 472  AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
            A   F  M  + L P+   YT  I    K      A    E ML     P+ +T + LV+
Sbjct: 1551 AEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVN 1610

Query: 532  GL------------CKLGSLEEANELL---RKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
            GL            C    +   + LL   +K+V D   P +  Y +II +      LR 
Sbjct: 1611 GLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLRE 1670

Query: 577  GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
              D  N M +KG  P  +T+  L++   + G+
Sbjct: 1671 ALDFKNRMAKKGYVPNPITFLSLLYGFCSVGK 1702


>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like, partial [Brachypodium distachyon]
          Length = 907

 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 178/604 (29%), Positives = 287/604 (47%), Gaps = 62/604 (10%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF-GIKP 241
           Y +    E    + + +   GL P+V     ++K     G   +A +V + + E   I  
Sbjct: 209 YCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVI 268

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
             V Y  +++ +C+ G M++A  +  EM   G   N   YN +I G+ + G + +   L+
Sbjct: 269 DEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLL 328

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
           +     G+ +  +SYN ++ GY  KG + +A    + MV  G   T  TYN L+ G C  
Sbjct: 329 QANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSR 388

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           G + DA   +F ML++ V+P+ IS +TLL G+ ++G   +A  L+ E  +R L   VVT 
Sbjct: 389 GAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTI 448

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR-------- 473
           NT+I+GLC+   +  A++L   M       D +TY  +++G CK+G+L  A         
Sbjct: 449 NTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMEN 508

Query: 474 -------EFFN--------------------EMLRKGLQPDRFAYTTQIAGELKLGDTSE 506
                  E FN                    EM  KGL P+   Y   IAG  K G+  +
Sbjct: 509 LGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHD 568

Query: 507 AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD--------- 557
           A  L  EM+ KG  P+L   +VLV    + G ++EAN +L+K+     I D         
Sbjct: 569 ACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIG 628

Query: 558 -----------------HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
                             I +  +I    ++G +   R+LF ++  KG  P   TY+ LI
Sbjct: 629 KVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLI 688

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
           H  +A G ++LAF    EM    + PN++TYN+LI GLC+   + +A  LF  ++ +GI 
Sbjct: 689 HGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGIS 748

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
           PN  TY  LI+ +C  GN  EA +L ++M+   I+P   T++ L+     + Y   A++ 
Sbjct: 749 PNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKL 808

Query: 721 LESL 724
           L+ +
Sbjct: 809 LDQM 812



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 172/554 (31%), Positives = 287/554 (51%), Gaps = 36/554 (6%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR--EVYRMM--GEF- 237
           Y ++  +E    V ++M+  G+  ++   N +I     NG+    R  EV +++   E+ 
Sbjct: 280 YCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMI-----NGYCKLGRMGEVEKLLQANEYR 334

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G+     +YNT++D +C++G M +A E    M   G +   +TYN L+ GF   G ++ A
Sbjct: 335 GVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDA 394

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L   MLK G+  +  S + ++ G+ + G   +ALNL +E + RG+A  + T N +I G
Sbjct: 395 LKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVING 454

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           LCK  R+++A   F  M   +   D ++Y TL+ GYC+ G++G A  +  E+ +   VP+
Sbjct: 455 LCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPS 514

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           V  +N+ I GL           ++  M  +G+ P+ +TY  ++ G CK GNL  A   + 
Sbjct: 515 VEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYF 574

Query: 478 EMLRKGLQPDRFAYTTQIA-----GEL--------KLGDT-------------SEAYRLQ 511
           EM+ KGL+P+ F  +  ++     G++        KL DT              +   + 
Sbjct: 575 EMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHII 634

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
           E +         I +N+++ GLCKLG + +A  L   +   GFIPD+ TY+S+IH     
Sbjct: 635 ESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSAS 694

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
           G +     L + ML   L+P +VTY  LI+       +  A   F+++Q KGI PN ITY
Sbjct: 695 GSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITY 754

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           N LI+G C+     +A+ L   M +EGI P  +TYTILI+  C  G  +EA++L  +M++
Sbjct: 755 NTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIE 814

Query: 692 REIEPDYCTHSALL 705
             ++P++ T+  L+
Sbjct: 815 NNVDPNFITYWTLI 828



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 174/618 (28%), Positives = 291/618 (47%), Gaps = 12/618 (1%)

Query: 92  LLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVV 151
           LL   L R+R  P  AL  FR    +P +         +L IL  +   R          
Sbjct: 15  LLHAALRRVRLDPDAALHLFRLAPCRPSL----LAHAQLLHILAHA--RRFPAARALLAS 68

Query: 152 CVNMHGILDVLIGGGLSS----CVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPD 207
            ++ H +   L    +        S    DLLL  +     ++  L VF++M + G    
Sbjct: 69  LLSAHSVAPTLFPDLVEVYKDFSFSAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRT 128

Query: 208 VKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLW 267
           +++CNR++  L   G    A  V++ M   G  P   T   M  ++C++G +  A + L 
Sbjct: 129 LRSCNRLLNQLVQAGDIGTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLK 188

Query: 268 EMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKG 327
           EM+  G   N V Y+ ++ G+ R G+ E AR L+  +   GL  +  +Y  ++ GY ++G
Sbjct: 189 EMEEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEG 248

Query: 328 LLVEALNLEEEMV-TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISY 386
            + EA  + +E+     +      Y  LI G C+ GR+ DA     EM+   V  ++  Y
Sbjct: 249 RMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVY 308

Query: 387 NTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMIN 446
           NT++ GYC+ G +GE   L      R +     +YNTL+DG CR G +  A +  + M+ 
Sbjct: 309 NTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVR 368

Query: 447 QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSE 506
            G     +TY  ++NG C  G +  A + +  ML++G+ P+  + +T + G  K G T +
Sbjct: 369 NGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQ 428

Query: 507 AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
           A  L +E LA+G   +++T N +++GLCK   + EA EL  +M       D +TY ++I 
Sbjct: 429 ALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLID 488

Query: 567 ASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRP 626
              ++GDL R   +   M   G  P++  +   I       +         EM  KG+ P
Sbjct: 489 GYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSP 548

Query: 627 NVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLY 686
           N +TY ALI G C+   +  A  L+ +M E+G+ PN +  ++L++     G   EA  + 
Sbjct: 549 NTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVL 608

Query: 687 KEMLDREIEPDYCTHSAL 704
           +++ D ++  D C+ S L
Sbjct: 609 QKLADTDMIQD-CSASTL 625



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 151/549 (27%), Positives = 267/549 (48%), Gaps = 27/549 (4%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           GV  DE+ + T+++     G +  A+   ET          D+++  G +   +    + 
Sbjct: 335 GVNLDEYSYNTLVDGYCRKGFMTKAF---ETC---------DMMVRNGFTG--TTLTYNT 380

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL  +  +  ++  L ++  ML+ G++P+  +C+ ++      G + +A  +++     G
Sbjct: 381 LLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARG 440

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           +  ++VT NT+++  CK   M EA EL   M+   C  + +TY  LI G+ + G+L +A 
Sbjct: 441 LARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRAT 500

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            +  +M  LG   S   +N  I G        +  ++  EM  +G++P   TY  LI G 
Sbjct: 501 QIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGW 560

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           CK G + DA   +FEM+ K + P++   + L+  + R G + EA L+  +L   +++   
Sbjct: 561 CKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQD- 619

Query: 419 VTYNTLIDGLCRYGDLEVAQ--QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
                     C    L + +   + E++         I + I++ G CK+G ++ AR  F
Sbjct: 620 ----------CSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLF 669

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
            ++  KG  PD F Y++ I G    G    A+ L++EML+    P+++TYN L++GLCK 
Sbjct: 670 EDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKS 729

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
            ++  A  L  K+   G  P+ ITY ++I    + G+      L   M+++G+ PT+ TY
Sbjct: 730 CNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTY 789

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
           T+LIH    +G +E A     +M    + PN ITY  LI G  R   +     L+ +M  
Sbjct: 790 TILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEMHI 849

Query: 657 EGILPNKYT 665
            G+LP  +T
Sbjct: 850 CGLLPANWT 858



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 148/510 (29%), Positives = 245/510 (48%), Gaps = 15/510 (2%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y +K  + +     + M+RNG        N ++      G    A +++ +M + G+ P+
Sbjct: 350 YCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPN 409

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            ++ +T+LD F K G+ ++AL L  E   RG + N VT N +I G  +N  + +A  L  
Sbjct: 410 EISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFH 469

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC--- 359
            M +      + +Y  +I GY + G L  A  +  EM   G  P++  +N  I GL    
Sbjct: 470 RMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAK 529

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
           + G+V+D R    EM  K + P+ ++Y  L+ G+C+ GN+ +A +L+ E+  + L P + 
Sbjct: 530 QSGKVNDIR---VEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLF 586

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
             + L+    R G ++ A  + + + +  ++ D    T+         N+         +
Sbjct: 587 ICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTL---------NIGKVAHIIESL 637

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
                Q  +  +   I G  KLG  ++A  L E++  KGF PD  TY+ L+HG    GS+
Sbjct: 638 AGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSI 697

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           + A  L  +M+     P+ +TY S+I+   +  ++ R   LFN +  KG+SP  +TY  L
Sbjct: 698 DLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTL 757

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           I  H   G    AF    +M  +GI+P V TY  LI+GLC    +++A  L   M E  +
Sbjct: 758 IDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNV 817

Query: 660 LPNKYTYTILINENCNAGNWQEALRLYKEM 689
            PN  TY  LI      GN +   +LY EM
Sbjct: 818 DPNFITYWTLIQGYARCGNMKAITKLYNEM 847



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/322 (27%), Positives = 160/322 (49%), Gaps = 1/322 (0%)

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
           S++ LL  +  +G + +A  +FDE+       T+ + N L++ L + GD+  A  + + M
Sbjct: 96  SFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQM 155

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
              G LPD  T  IM    C+ G ++ A +F  EM   GL  +  AY   + G  ++G T
Sbjct: 156 RCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQT 215

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV-GDGFIPDHITYTS 563
             A +L   +  KG  P+++TY +LV G CK G +EEA ++++++   +  + D + Y +
Sbjct: 216 EVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGA 275

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           +I+   + G +     + + M+  G+   +  Y  +I+ +   GR+          + +G
Sbjct: 276 LINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRG 335

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
           +  +  +YN L++G CR   + +A+     M   G      TY  L+N  C+ G   +AL
Sbjct: 336 VNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDAL 395

Query: 684 RLYKEMLDREIEPDYCTHSALL 705
           +L+  ML R + P+  + S LL
Sbjct: 396 KLWFLMLKRGVVPNEISCSTLL 417



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 56/119 (47%)

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
           K  S +  ++ +L+ AHA  G+L+ A   F EM   G R  + + N L+N L +   I  
Sbjct: 88  KDFSFSAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGT 147

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           A  +F  M   G LP+ +T  I+    C  G    A    KEM +  ++ +   + A++
Sbjct: 148 AVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVM 206


>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 819

 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 172/600 (28%), Positives = 279/600 (46%), Gaps = 53/600 (8%)

Query: 144 YWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNG 203
           +W  +T +     G+             S+K  + L+    K + + +   VF+ M R G
Sbjct: 188 HWAFDTFMLFTSKGVFP-----------SLKSCNFLMSSLVKSNELHKSFRVFDAMCRGG 236

Query: 204 LLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEAL 263
           +L DV      I      G   +A  ++  MGE G+ P++VTYN ++D  CK G ++EAL
Sbjct: 237 VLIDVYTYATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEAL 296

Query: 264 ELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGY 323
                M     +P+ VTY +L+ G  +  + ++A  ++ +M   G   +   +N +I GY
Sbjct: 297 MFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGY 356

Query: 324 SEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP-- 381
           S KG + +AL + ++M  +G+ P   T+N L+ G C+  ++  A  +  E L  NV+   
Sbjct: 357 SRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAE-QVLEYLLSNVLSVN 415

Query: 382 -DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD-LEVAQQ 439
            D  SY  +L+  C+S     A  +   L  RN+         L+ GLC+ G  LE    
Sbjct: 416 EDACSY--VLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDL 473

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
                  +G+  +  T   ++ G C+ GN+        EM+ +GL  D  +Y T I G  
Sbjct: 474 WFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCC 533

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD-- 557
           K G   EA++L+E+M+ +GF PD  TYN L+ GL   G +++   +L +    G +P+  
Sbjct: 534 KSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIY 593

Query: 558 ---------------------------------HITYTSIIHASLEMGDLRRGRDLFNNM 584
                                            ++ Y  +I A  + G+      L + M
Sbjct: 594 TYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAM 653

Query: 585 LRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRI 644
               + PT+ TY+ +IH       +E A   F EM+ +G+ PNV  Y ALI G C+L ++
Sbjct: 654 RSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQM 713

Query: 645 DQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
           DQ   +  +M    I PNK TYTI+I+  C  GN +EA +L  EM+   I PD  T++ L
Sbjct: 714 DQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVL 773



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 152/609 (24%), Positives = 284/609 (46%), Gaps = 84/609 (13%)

Query: 140 LRSAYWVVETVVCVN-MHG---ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLV 195
           L+S  +++ ++V  N +H    + D +  GG+   + +      +  Y K   +++ + +
Sbjct: 206 LKSCNFLMSSLVKSNELHKSFRVFDAMCRGGV--LIDVYTYATAINAYCKGGKIDEAVGL 263

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTY--------- 246
           F KM   G+LP+V   N +I  L  +G   +A      M E  + PS+VTY         
Sbjct: 264 FLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVK 323

Query: 247 --------------------------NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVT 280
                                     N ++D + ++G M +AL +  +M  +G  PN VT
Sbjct: 324 FEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVT 383

Query: 281 YNVLITGFSRNGELEQAR-----------------------------------GLIRDML 305
           +N L+ GF R  ++EQA                                     +++ +L
Sbjct: 384 HNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALL 443

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV-TRGVAPTLATYNILIYGLCKWGRV 364
              +KV+      ++CG  + G  +EA++L   +   +G+A    T N L+YGLC+ G +
Sbjct: 444 LRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNM 503

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            +      EM+ + ++ D ISYNTL++G C+SG I EAF L +++  +   P   TYN L
Sbjct: 504 EEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFL 563

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           + GL   G ++   ++     + G++P++ TY +M+ G C    +  A   FN+++   +
Sbjct: 564 MKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKV 623

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
           +     Y   IA   K G+ +EA++L++ M +    P + TY+ ++HG+C    +EEA  
Sbjct: 624 ELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKG 683

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           +  +M  +G +P+   YT++I    ++G + +   +   M    + P  +TYT++I  + 
Sbjct: 684 IFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYC 743

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP-NK 663
             G  + A    +EM   GI P+ +TY  L  G C+   +++       ++ +  +P  +
Sbjct: 744 KMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKENELEET------LQGDTAVPLEE 797

Query: 664 YTYTILINE 672
            TYT L+++
Sbjct: 798 ITYTTLVDK 806



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 200/421 (47%), Gaps = 36/421 (8%)

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
            ++GV P+L + N L+  L K   +  +   F  M R  V+ D+ +Y T +  YC+ G I
Sbjct: 198 TSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKI 257

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
            EA  LF ++    ++P VVTYN LIDGLC+ G LE A   K  M+   + P ++TY I+
Sbjct: 258 DEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGIL 317

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           VNG  K      A     EM  KG  P+ F +   I G  + G+  +A R++++M  KG 
Sbjct: 318 VNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGL 377

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH---------ASLE 570
            P+ +T+N L+ G C+   +E+A ++L  ++ +    +    + ++H         ++L+
Sbjct: 378 KPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALK 437

Query: 571 M---------------------GDLRRGRDL------FNNMLRKGLSPTLVTYTVLIHAH 603
           +                     G  + G+ L      F    +KGL+    T   L++  
Sbjct: 438 IVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGL 497

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
             RG +E  F    EM  +G+  + I+YN LI G C+  +I++A+ L   M ++G  P+ 
Sbjct: 498 CERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDT 557

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLES 723
           YTY  L+    + G   +  R+  E  D  + P+  T++ +L    + D   +AV     
Sbjct: 558 YTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNK 617

Query: 724 L 724
           L
Sbjct: 618 L 618


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 156/491 (31%), Positives = 248/491 (50%), Gaps = 2/491 (0%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G +P  VT  T++     E  + +A++L  EM  +G   +  TY +LI G  +  +   A
Sbjct: 72  GFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLA 131

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L  + +K   K    +Y  II    + G+  EAL++  EM+  G+ P +  Y+ L+ G
Sbjct: 132 IKL-HEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDG 190

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           LC++GR+ +A   F EM  + +  D+ +YN+L++G  R+G   E     + +  R   P 
Sbjct: 191 LCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPD 250

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
             T+  LIDGLC+ G +  AQQ+ E M ++G  PD++TY  ++NG C +G L  A + F 
Sbjct: 251 AFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFE 310

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            +  +G++ + F+Y   I G  K     EA+RL EEM  KG  P  +TYN L+  LC+ G
Sbjct: 311 SLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSG 370

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            +  A +L  +M   G      TY  ++    + G L    DLF ++ +    P +  ++
Sbjct: 371 RVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFS 430

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           +L+      G+LE A+  F E+   G+ P+ I YN LINGLC    + +A  L   MEE+
Sbjct: 431 ILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEK 490

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL-LKQLDKDYKVH 716
           G LP+  T+ ++I          EA++L +EM +R   PD    S LL L   D  +   
Sbjct: 491 GCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWHAA 550

Query: 717 AVEYLESLTLG 727
            V    +L  G
Sbjct: 551 LVSLPNALQKG 561



 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 135/394 (34%), Positives = 214/394 (54%)

Query: 207 DVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELL 266
           DV     II  L  +G + +A +++  M   GI P +V Y++++D  C+ G ++EALE  
Sbjct: 145 DVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFF 204

Query: 267 WEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEK 326
            EM+GRG S +  TYN LI G SR G  ++    +  M+  G    A ++  +I G  ++
Sbjct: 205 KEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKE 264

Query: 327 GLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISY 386
           G + EA  + E M  +G  P + TYN L+ GLC  G++ DA   F  +  + +  ++ SY
Sbjct: 265 GKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSY 324

Query: 387 NTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMIN 446
           N L+ GYC+   I EAF LF+E+R + L P+ VTYNTLI  LC+ G +  AQ+L   M  
Sbjct: 325 NILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQT 384

Query: 447 QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSE 506
            G    + TY ++++G CK G+L  A + F  + +   +P+   ++  + G  + G   E
Sbjct: 385 CGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEE 444

Query: 507 AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
           A++  +E+   G  PD I YN+L++GLC  G L EA +LL +M   G +PD IT+  II 
Sbjct: 445 AWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQ 504

Query: 567 ASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
             L+  ++     L   M  +  SP     ++L+
Sbjct: 505 NLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 135/417 (32%), Positives = 216/417 (51%), Gaps = 1/417 (0%)

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           LK G +  A +   ++ G   +  + +A+ L +EM  +G+     TY ILI GLCK  R 
Sbjct: 69  LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCK-ARK 127

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
           +    +  E ++ N   D+ +Y  ++   C+ G   EA  +F E+    ++P VV Y++L
Sbjct: 128 TGLAIKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 187

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           +DGLCR+G L+ A +  + M  +GI  DV TY  +++G  + G       F N M+ +G 
Sbjct: 188 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGF 247

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            PD F +T  I G  K G   EA ++ E M  KG  PD++TYN L++GLC +G LE+A +
Sbjct: 248 SPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATK 307

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           L   +   G   +  +Y  +I+   +   +     LF  M  KGL P+ VTY  LI A  
Sbjct: 308 LFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALC 367

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
             GR+  A   F EMQ  G    + TY  L++GLC+   +++A  LF  +++    PN  
Sbjct: 368 QSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIE 427

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYL 721
            ++IL++  C AG  +EA + + E+    +EPD   ++ L+    +K     AV+ L
Sbjct: 428 VFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLL 484



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 124/381 (32%), Positives = 203/381 (53%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K  M  + L +F++M+  G+LPDV   + ++  L   G   +A E ++ M   GI   + 
Sbjct: 158 KDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVY 217

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TYN+++    + G  +E    L  M  RG SP+  T+ +LI G  + G++ +A+ ++  M
Sbjct: 218 TYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELM 277

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
              G +    +YN ++ G    G L +A  L E +  RG+   + +YNILI G CK  ++
Sbjct: 278 HHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKI 337

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            +A   F EM  K + P  ++YNTL+   C+SG +  A  LF E+++      + TY  L
Sbjct: 338 DEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVL 397

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           +DGLC+ G LE A  L +++      P++  ++I+++G C+ G L  A + F+E+ + GL
Sbjct: 398 LDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGL 457

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
           +PD  AY   I G    G  SEA +L  +M  KG  PD IT+NV++  L K   + EA +
Sbjct: 458 EPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQ 517

Query: 545 LLRKMVGDGFIPDHITYTSII 565
           LL +M    F PD    + ++
Sbjct: 518 LLEEMRNRNFSPDEAVTSMLL 538



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 176/381 (46%), Gaps = 50/381 (13%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           AL FF+ +E + G+  D + + +++  L  +GL +   W +                   
Sbjct: 200 ALEFFKEMEGR-GISADVYTYNSLIHGLSRAGLWKEVTWFL------------------- 239

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
                                         N M+  G  PD      +I  L   G   +
Sbjct: 240 ------------------------------NLMVDRGFSPDAFTFTILIDGLCKEGKVGE 269

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A+++  +M   G +P I+TYNT+++  C  G++++A +L   +  RG   N  +YN+LI 
Sbjct: 270 AQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILIN 329

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G+ ++ ++++A  L  +M   GLK S  +YN +I    + G +  A  L  EM T G   
Sbjct: 330 GYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFL 389

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
            L+TY +L+ GLCK G + +A   F  + +    P+I  ++ LL G CR+G + EA+  F
Sbjct: 390 KLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQF 449

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
           DE+    L P  + YN LI+GLC  G L  A +L   M  +G LPD IT+ +++    K 
Sbjct: 450 DEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKE 509

Query: 467 GNLSMAREFFNEMLRKGLQPD 487
             +  A +   EM  +   PD
Sbjct: 510 NEIHEAIQLLEEMRNRNFSPD 530



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 24/201 (11%)

Query: 107 ALRFFRWVETQP-GVKRDEFVFCTILEILIESGLLRSAYWV-VETVVCVNMHGI------ 158
           A R F   E +P G+K     + T++  L +SG +R+A  + VE   C     +      
Sbjct: 340 AFRLFE--EMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVL 397

Query: 159 LDVLIGGG-LSSCV-------------SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGL 204
           LD L   G L   +             +I++  +LL    +   +E+    F+++ +NGL
Sbjct: 398 LDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGL 457

Query: 205 LPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALE 264
            PD    N +I  L + G   +A ++   M E G  P  +T+N ++ +  KE E+ EA++
Sbjct: 458 EPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQ 517

Query: 265 LLWEMQGRGCSPNGVTYNVLI 285
           LL EM+ R  SP+    ++L+
Sbjct: 518 LLEEMRNRNFSPDEAVTSMLL 538


>gi|224138172|ref|XP_002326536.1| predicted protein [Populus trichocarpa]
 gi|222833858|gb|EEE72335.1| predicted protein [Populus trichocarpa]
          Length = 697

 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 168/607 (27%), Positives = 298/607 (49%), Gaps = 17/607 (2%)

Query: 126 VFCTILEILIESGLLRSAYWVVETVVC------VNMHGILDVLIGGGLSSCVSIKILDLL 179
            F TI+ +   +GL R A +++  +V       +N+ G+    +        S  +L LL
Sbjct: 62  AFRTIVHVFALAGLQREAQYLLTDIVFYYKEENLNVSGLFSTFLDSPECVGRSATVLSLL 121

Query: 180 LLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGI 239
           + ++    M+     VF +  + G+  ++ +CN ++K L +       R ++  +   G 
Sbjct: 122 IKVFASNKMLADAKDVFMQAKKIGVELNISSCNFLLKCLAEGDKLEAVRSLFDDLKNSGP 181

Query: 240 KPSIVTYNTMLDSFCKEG-----EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
            P++ TY  M++ +CKE      +M++A  +L EM+ +G +P  VTY V I G  R G +
Sbjct: 182 SPNVYTYTIMINFYCKERHGQNIDMEQASLILEEMEEKGENPTVVTYGVYIHGLCRVGSI 241

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           E A   I+D+      ++ + YN +I G+ +KG   EAL L EEM   G++P + +Y+IL
Sbjct: 242 EDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEGISPDIYSYSIL 301

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           +   C  G +    +   EM   N  P ++   ++L G    G + +    F EL ++  
Sbjct: 302 VNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHELSAKGY 361

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
              +++Y+TLI G  +  +++ A  L   M   G++PD I Y  ++   C+ G L  A +
Sbjct: 362 KHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIREYCRKGCLKEALK 421

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
            F  ML+ GLQPD       +      G   EA     +M  +   P+  TY+V+++ LC
Sbjct: 422 NFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNILPNSYTYSVIINWLC 481

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHA-SLEMGDLRRGRDLFNNMLRKGLSPTL 593
           K  ++E+A E+L  M  D   P  I YT+I+   + +  +  +   L+  M + G  P  
Sbjct: 482 KYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQFKNPMKAWKLYRKMPKLGCKPDN 541

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
           VT TVL+   + RG++  A   F EM  +G+  +   + A+I+G CR+  + +A+ ++  
Sbjct: 542 VTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFTAIIDGYCRVGNVKRAWSMYKK 601

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL-----LKQ 708
           M+   + PN  TYT L++  C       A  L  +M    + PD  T++AL+     ++ 
Sbjct: 602 MKRNNVTPNVKTYTCLVDGFCKLKRLDMATMLIDDMKRNSVTPDVKTYTALIAGYQRIEN 661

Query: 709 LDKDYKV 715
           +D+ Y+V
Sbjct: 662 IDRAYEV 668



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 137/429 (31%), Positives = 221/429 (51%), Gaps = 1/429 (0%)

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
           +I  YN ++  FC++G   EAL+LL EM+  G SP+  +Y++L+  F   G++E    LI
Sbjct: 259 NIYCYNALIQGFCQKGRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLI 318

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
           ++M     K        ++ G   KGL+ + LN   E+  +G    L +Y+ LI+G  K 
Sbjct: 319 QEMEHCNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKG 378

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
             V  A +   EM +  ++PD I Y +L+  YCR G + EA   F  +    L P ++T 
Sbjct: 379 HNVKSANNLVHEMRKNGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITC 438

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           N ++D  C  G  E A      M +Q ILP+  TY++++N  CK   +  A E    M +
Sbjct: 439 NHIVDQYCSRGQFEEALIYINQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFK 498

Query: 482 KGLQPDRFAYTTQIAGELK-LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
             + P    YTT + G  K   +  +A++L  +M   G  PD +T  VLV    K G + 
Sbjct: 499 DNIFPSVIHYTTIMDGYAKQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMS 558

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           +A  L ++M  +G   D   +T+II     +G+++R   ++  M R  ++P + TYT L+
Sbjct: 559 KALNLFKEMAEEGLSRDEFAFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLV 618

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                  RL++A M   +M+   + P+V TY ALI G  R+  ID+AY +F +M+++G L
Sbjct: 619 DGFCKLKRLDMATMLIDDMKRNSVTPDVKTYTALIAGYQRIENIDRAYEVFDEMKKKGTL 678

Query: 661 PNKYTYTIL 669
           P+   Y  L
Sbjct: 679 PDHIAYLTL 687



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 81/282 (28%), Positives = 147/282 (52%), Gaps = 1/282 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y +K  +++ L  F  ML++GL PD+  CN I+      G   +A      M +  I P+
Sbjct: 410 YCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNILPN 469

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE-QARGLI 301
             TY+ +++  CK   +++A E+L  M      P+ + Y  ++ G+++  +   +A  L 
Sbjct: 470 SYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQFKNPMKAWKLY 529

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
           R M KLG K    +   ++  +S++G + +ALNL +EM   G++     +  +I G C+ 
Sbjct: 530 RKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFTAIIDGYCRV 589

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           G V  A   + +M R NV P++ +Y  L+ G+C+   +  A +L D+++  ++ P V TY
Sbjct: 590 GNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRLDMATMLIDDMKRNSVTPDVKTY 649

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
             LI G  R  +++ A ++ + M  +G LPD I Y  +  G+
Sbjct: 650 TALIAGYQRIENIDRAYEVFDEMKKKGTLPDHIAYLTLGLGA 691


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 155/491 (31%), Positives = 247/491 (50%), Gaps = 2/491 (0%)

Query: 238  GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
            G +P  VT  T++     E  + +A++L  EM  +G   +  TY +LI G  +  +   A
Sbjct: 1011 GFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLA 1070

Query: 298  RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
              L  + +K   K    +Y  II    + G+  EAL++  EM+  G+ P +  Y+ L+ G
Sbjct: 1071 IKL-HEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDG 1129

Query: 358  LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
            LC++GR+ +A   F EM  + +  D+ +YN+L++G  R+G   E     + +  R   P 
Sbjct: 1130 LCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPD 1189

Query: 418  VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
              T+  LIDGLC+ G +  AQQ+ E M ++G  PD++TY  ++NG C +G L  A + F 
Sbjct: 1190 AFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFE 1249

Query: 478  EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
             +  +G++ + F+Y   I G  K     EA+R  EEM  KG  P  +TYN L+  LC+ G
Sbjct: 1250 SLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSG 1309

Query: 538  SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
             +  A +L  +M   G      TY  ++    + G L    DLF ++ +    P +  ++
Sbjct: 1310 RVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFS 1369

Query: 598  VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
            +L+      G+LE A+  F E+   G+ P+ I YN LINGLC    + +A  L   MEE+
Sbjct: 1370 ILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEK 1429

Query: 658  GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL-LKQLDKDYKVH 716
            G LP+  T+ ++I          EA++L +EM +R   PD    S LL L   D  +   
Sbjct: 1430 GCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWHAA 1489

Query: 717  AVEYLESLTLG 727
             V    +L  G
Sbjct: 1490 LVSLPNALQKG 1500



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 126/382 (32%), Positives = 206/382 (53%), Gaps = 2/382 (0%)

Query: 185  KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
            K  M  + L +F++M+  G+LPDV   + ++  L   G   +A E ++ M   GI   + 
Sbjct: 1097 KDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVY 1156

Query: 245  TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
            TYN+++    + G  +E    L  M  RG SP+  T+ +LI G  + G++ +A+ ++  M
Sbjct: 1157 TYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELM 1216

Query: 305  LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
               G +    +YN ++ G    G L +A  L E +  RG+   + +YNILI G CK  ++
Sbjct: 1217 RHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKI 1276

Query: 365  SDARHRFFEMLR-KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
             +A  RFFE +R K + P  ++YNTL+   C+SG +  A  LF E+++      + TY  
Sbjct: 1277 DEA-FRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCV 1335

Query: 424  LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
            L+DGLC+ G LE A  L +++      P++  ++I+++G C+ G L  A + F+E+ + G
Sbjct: 1336 LLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNG 1395

Query: 484  LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
            L+PD  AY   I G    G  SEA +L  +M  KG  PD IT+NV++  L K   + EA 
Sbjct: 1396 LEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAI 1455

Query: 544  ELLRKMVGDGFIPDHITYTSII 565
            +LL +M    F PD    + ++
Sbjct: 1456 QLLEEMRNRNFSPDEAVTSMLL 1477



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 127/406 (31%), Positives = 199/406 (49%), Gaps = 11/406 (2%)

Query: 306  KLGLKVSAHSYNPIICGYSEKGL--LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
            K+G K S   +   +      G+  L +A+ L +  +     P   T+N L+  + K G 
Sbjct: 902  KIGTKASLSPFERYVRDQCRFGIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGY 961

Query: 364  VSDARHRFFEMLRK----NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
             S      F M RK     + PD+ + N L++  C    +G  F +F     R   P  V
Sbjct: 962  YSTV----FPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAV 1017

Query: 420  TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
            T  TL+ G+     +  A QL + M  +G+L D  TY I++NG CK     +A +  +E 
Sbjct: 1018 TVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIK-LHEK 1076

Query: 480  LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
            ++   + D F Y   I    K G T+EA  +  EM+  G  PD++ Y+ L+ GLC+ G L
Sbjct: 1077 MKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRL 1136

Query: 540  EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
            +EA E  ++M G G   D  TY S+IH     G  +      N M+ +G SP   T+T+L
Sbjct: 1137 KEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTIL 1196

Query: 600  IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
            I      G++  A      M+ KG  P+++TYN L+NGLC + +++ A  LF  + + GI
Sbjct: 1197 IDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGI 1256

Query: 660  LPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
              N ++Y ILIN  C      EA R ++EM  + ++P   T++ L+
Sbjct: 1257 KLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLI 1302



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 175/381 (45%), Gaps = 50/381 (13%)

Query: 107  ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
            AL FF+ +E + G+  D + + +++  L  +GL +   W +                   
Sbjct: 1139 ALEFFKEMEGR-GISADVYTYNSLIHGLSRAGLWKEVTWFL------------------- 1178

Query: 167  LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
                                          N M+  G  PD      +I  L   G   +
Sbjct: 1179 ------------------------------NLMVDRGFSPDAFTFTILIDGLCKEGKVGE 1208

Query: 227  AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
            A+++  +M   G +P I+TYNT+++  C  G++++A +L   +  RG   N  +YN+LI 
Sbjct: 1209 AQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILIN 1268

Query: 287  GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
            G+ ++ ++++A     +M   GLK S  +YN +I    + G +  A  L  EM T G   
Sbjct: 1269 GYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFL 1328

Query: 347  TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
             L+TY +L+ GLCK G + +A   F  + +    P+I  ++ LL G CR+G + EA+  F
Sbjct: 1329 KLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQF 1388

Query: 407  DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
            DE+    L P  + YN LI+GLC  G L  A +L   M  +G LPD IT+ +++    K 
Sbjct: 1389 DEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKE 1448

Query: 467  GNLSMAREFFNEMLRKGLQPD 487
              +  A +   EM  +   PD
Sbjct: 1449 NEIHEAIQLLEEMRNRNFSPD 1469



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 24/201 (11%)

Query: 107  ALRFFRWVETQP-GVKRDEFVFCTILEILIESGLLRSA------------------YWVV 147
            A RFF   E +P G+K     + T++  L +SG +R+A                  Y V+
Sbjct: 1279 AFRFFE--EMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVL 1336

Query: 148  ETVVCVNMH--GILDVLIG-GGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGL 204
               +C N H    +D+           +I++  +LL    +   +E+    F+++ +NGL
Sbjct: 1337 LDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGL 1396

Query: 205  LPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALE 264
             PD    N +I  L + G   +A ++   M E G  P  +T+N ++ +  KE E+ EA++
Sbjct: 1397 EPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQ 1456

Query: 265  LLWEMQGRGCSPNGVTYNVLI 285
            LL EM+ R  SP+    ++L+
Sbjct: 1457 LLEEMRNRNFSPDEAVTSMLL 1477


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 170/536 (31%), Positives = 272/536 (50%), Gaps = 15/536 (2%)

Query: 177 DLLLLI---YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK-VLRDNGFSVKAREVYR 232
           DL + I   Y +    EQ L +F ++   G  P V+  N ++  +L +N F +    +Y 
Sbjct: 110 DLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQM-INPLYT 168

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
            M + G+ P++ TYN +L + CK   +  A +L  EM  +GC P+ VTY  +++   + G
Sbjct: 169 NMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAG 228

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
           +++ AR L         K S   YN +I G  ++G +  A+ L  EM+  GV P + +Y+
Sbjct: 229 KIDDARELAGR-----FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYS 283

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
            +I  LC  G V  A   F +M  +    +I ++  L+ G    G + EA  L+  +   
Sbjct: 284 CIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQD 343

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
              P VV YNTLI GLC  G LE A Q+ + M   G LP+V TY+I+++G  K G+L  A
Sbjct: 344 GCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGA 403

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
            E +N M+  G +P+   YT  +    K     +A  L E+M  +G  P+ +T+N  + G
Sbjct: 404 SETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKG 463

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           LC  G +E A +LL +M G G +P+  TY  ++ A   M        LF  +  + L P 
Sbjct: 464 LCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPN 523

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL-- 650
           LVTY  +++  +  G +  A   F +  V+G  P+ ITYN +I+  C+  ++  A  L  
Sbjct: 524 LVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVE 583

Query: 651 -FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
               M+E    P+  TYT LI   CN  N +EA+    + +++ I P++ T +AL+
Sbjct: 584 RVSSMKEWH--PDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALV 637



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 147/461 (31%), Positives = 236/461 (51%), Gaps = 5/461 (1%)

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY  M++   +E EM     +L +M+  G +     +  +I G+ R G  EQA  +   +
Sbjct: 76  TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
            + G K +   YN ++     +        L   M   G+ P + TYNIL+  LCK  RV
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRV 195

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
             A   F EM  K   PD ++Y T++   C++G I +A     EL  R   P+V  YN L
Sbjct: 196 DAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDA----RELAGR-FKPSVPVYNAL 250

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           IDG+C+ G +EVA +L   M++ G+ P+V++Y+ ++N  C  GN+ +A   F +M  +G 
Sbjct: 251 IDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGC 310

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
             +   +T  I G    G   EA  L + M+  G  P+++ YN L+HGLC  GSLEEA +
Sbjct: 311 DANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQ 370

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           +  +M   G +P+  TY+ +I    + GDL    + +N M+  G  P +VTYT ++    
Sbjct: 371 VCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLC 430

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
                + A     +M ++G  PN +T+N  I GLC   R++ A  L   M+  G LPN  
Sbjct: 431 KNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNIT 490

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           TY  L++       ++EA  L++E+  R ++P+  T++ +L
Sbjct: 491 TYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVL 531



 Score = 46.2 bits (108), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 1/107 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG-FSVKAREVYRMMGEFGIKP 241
           +++  M+ + L +F K L  G  PD    N +I      G   + A+ V R+       P
Sbjct: 534 FSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHP 593

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
            I+TY +++   C    ++EA+  L +   +G  PN  T+N L+  F
Sbjct: 594 DIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCF 640



 Score = 45.8 bits (107), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 31/149 (20%), Positives = 59/149 (39%), Gaps = 35/149 (23%)

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI--------------------------- 624
           T  TY V+I        +++      +M++ GI                           
Sbjct: 73  TASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMF 132

Query: 625 --------RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNA 676
                   +P V  YN L++ L    +      L+ +M+++G++PN +TY IL+   C  
Sbjct: 133 YRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKN 192

Query: 677 GNWQEALRLYKEMLDREIEPDYCTHSALL 705
                A +L+ EM ++   PD  T++ ++
Sbjct: 193 DRVDAAHKLFVEMSNKGCPPDAVTYTTMV 221


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 144/530 (27%), Positives = 276/530 (52%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F  M+++  LP V + NR+   +           + + M   GI  SI T + M++ FC
Sbjct: 75  LFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFC 134

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           +  ++  A   + ++   G  P+ V +N L+ G      + +A  L+  M+++G K +  
Sbjct: 135 RCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLI 194

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           + N ++ G    G + +A+ L + MV  G  P   TY  ++  +CK G+ + A     +M
Sbjct: 195 TLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM 254

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
             +N+  D + Y+ ++ G C+ G++  AF LF+E+  +     ++TYNTLI G C  G  
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRW 314

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           +   +L  +MI + I P+V+T++++++   K G L  A +   EM+++G+ P+   Y + 
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSL 374

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I G  K     EA ++ + M++KG  PD++T+N+L++G CK   +++  EL R+M   G 
Sbjct: 375 IDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGV 434

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
           I + +TY +++    + G L   + LF  M+ + + P +V+Y +L+      G LE A  
Sbjct: 435 IANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALE 494

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F +++   +  ++  Y  +I+G+C   ++D A+ LF  +  +G+  +   Y I+I+E C
Sbjct: 495 IFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELC 554

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
              +  +A  L+++M +    PD  T++ L+   L  D    A E +E +
Sbjct: 555 RKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEM 604



 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 147/465 (31%), Positives = 237/465 (50%)

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
           + G +P  V +NT+L+  C E  + EALEL+  M   G  P  +T N L+ G   NG++ 
Sbjct: 151 KLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVS 210

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
            A  LI  M++ G + +  +Y P++    + G    A+ L  +M  R +      Y+I+I
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
            GLCK G + +A + F EM  K    DII+YNTL+ G+C +G   +   L  ++  R + 
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P VVT++ LID   + G L  A QL + M+ +GI P+ ITY  +++G CK   L  A + 
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
            + M+ KG  PD   +   I G  K     +   L  EM  +G   + +TYN LV G C+
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ 450

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
            G LE A +L ++MV     PD ++Y  ++    + G+L +  ++F  + +  +   +  
Sbjct: 451 SGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI 510

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           Y ++IH      +++ A+  F  + +KG++ +   YN +I+ LCR   + +A  LF  M 
Sbjct: 511 YMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMT 570

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
           EEG  P++ TY ILI  +    +   A  L +EM       D  T
Sbjct: 571 EEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVST 615



 Score =  249 bits (635), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 137/426 (32%), Positives = 229/426 (53%), Gaps = 1/426 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V   +++ ++M+  G  P+      ++ V+  +G +  A E+ R M E  IK   V Y+ 
Sbjct: 209 VSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++D  CK+G +  A  L  EM+ +G   + +TYN LI GF   G  +    L+RDM+K  
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           +  +  +++ +I  + ++G L EA  L +EM+ RG+AP   TYN LI G CK  R+ +A 
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
                M+ K   PDI+++N L+ GYC++  I +   LF E+  R ++   VTYNTL+ G 
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGF 448

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G LEVA++L + M+++ + PD+++Y I+++G C  G L  A E F ++ +  ++ D 
Sbjct: 449 CQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDI 508

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             Y   I G        +A+ L   +  KG   D   YN+++  LC+  SL +A+ L RK
Sbjct: 509 GIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRK 568

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M  +G  PD +TY  +I A L   D     +L   M   G    + T  ++I+  ++ G 
Sbjct: 569 MTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSS-GE 627

Query: 609 LELAFM 614
           L+ +F+
Sbjct: 628 LDKSFL 633



 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 130/411 (31%), Positives = 215/411 (52%)

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           + A  L RDM++     +   +N +    ++       L L ++M ++G+A ++ T +I+
Sbjct: 70  DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           I   C+  ++S A     ++++    PD + +NTLL G C    + EA  L D +     
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            PT++T NTL++GLC  G +  A  L + M+  G  P+ +TY  ++N  CK G  ++A E
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
              +M  + ++ D   Y+  I G  K G    A+ L  EM  KGF  D+ITYN L+ G C
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
             G  ++  +LLR M+     P+ +T++ +I + ++ G LR    L   M+++G++P  +
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           TY  LI       RLE A      M  KG  P+++T+N LING C+  RID    LF +M
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM 429

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
              G++ N  TY  L+   C +G  + A +L++EM+ R + PD  ++  LL
Sbjct: 430 SLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILL 480



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 123/438 (28%), Positives = 225/438 (51%)

Query: 260 QEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI 319
            +A++L  +M      P  + +N L +  ++  + E    L + M   G+  S ++ + +
Sbjct: 70  DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           I  +     L  A +   +++  G  P    +N L+ GLC   RVS+A      M+    
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
            P +I+ NTL+ G C +G + +A +L D +      P  VTY  +++ +C+ G   +A +
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           L   M  + I  D + Y+I+++G CK G+L  A   FNEM  KG + D   Y T I G  
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
             G   +  +L  +M+ +   P+++T++VL+    K G L EA++LL++M+  G  P+ I
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
           TY S+I    +   L     + + M+ KG  P ++T+ +LI+ +    R++     F EM
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM 429

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
            ++G+  N +TYN L+ G C+  +++ A  LF +M    + P+  +Y IL++  C+ G  
Sbjct: 430 SLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGEL 489

Query: 680 QEALRLYKEMLDREIEPD 697
           ++AL ++ ++   ++E D
Sbjct: 490 EKALEIFGKIEKSKMELD 507



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 227/450 (50%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V + L + ++M+  G  P +   N ++  L  NG    A  +   M E G +P+ VTY  
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +L+  CK G+   A+ELL +M+ R    + V Y+++I G  ++G L+ A  L  +M   G
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            K    +YN +I G+   G   +   L  +M+ R ++P + T+++LI    K G++ +A 
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               EM+++ + P+ I+YN+L+ G+C+   + EA  + D + S+   P ++T+N LI+G 
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+   ++   +L   M  +G++ + +TY  +V G C+ G L +A++ F EM+ + ++PD 
Sbjct: 414 CKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDI 473

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
            +Y   + G    G+  +A  +  ++       D+  Y +++HG+C    +++A +L   
Sbjct: 474 VSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCS 533

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           +   G   D   Y  +I        L +   LF  M  +G +P  +TY +LI AH     
Sbjct: 534 LPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDD 593

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGL 638
              A     EM+  G   +V T   +IN L
Sbjct: 594 ATTAAELIEEMKSSGFPADVSTVKMVINML 623



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 162/343 (47%)

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           +  DA   F +M++   +P +I +N L     ++        L  ++ S+ +  ++ T +
Sbjct: 68  KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            +I+  CR   L  A      ++  G  PD + +  ++NG C    +S A E  + M+  
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G +P      T + G    G  S+A  L + M+  GF P+ +TY  +++ +CK G    A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            ELLRKM       D + Y+ II    + G L    +LFN M  KG    ++TY  LI  
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
               GR +       +M  + I PNV+T++ LI+   +  ++ +A  L  +M + GI PN
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             TY  LI+  C     +EA+++   M+ +  +PD  T + L+
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILI 410



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 92/217 (42%)

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
            +Y  +++  L      +A  L  +M+     P +I +N L   + K    E    L ++
Sbjct: 54  LSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQ 113

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M   G      T + +I+       L         +++ G  P  V +  L++      R
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           +  A      M   G +P +IT N L+NGLC   ++  A  L   M E G  PN+ TY  
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           ++N  C +G    A+ L ++M +R I+ D   +S ++
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  265 bits (678), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 162/493 (32%), Positives = 250/493 (50%), Gaps = 4/493 (0%)

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
           +M   F + PS  +YN +L +  +     +AL L   M      P   T+ V      R 
Sbjct: 131 QMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRL 190

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G    A  L+R M + G    A  Y  +I     +G + EA  L +EM+  G A  + T+
Sbjct: 191 GRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTF 250

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           N L+ GLC  GRV +A      M+ +  +P +++Y  LL G CR+    EA  +   L  
Sbjct: 251 NDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPE 310

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
            N    VV  NT+I G    G L  A +L E M ++G  PDV TY+I+++G CK+G    
Sbjct: 311 VN----VVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGS 366

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A    +EM  KG  P+   Y+T +    + G   +A  + ++MLAKGF  +   YN +++
Sbjct: 367 AVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIY 426

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
            LCK G L++A  L+++M   G  PD  TY ++I+       +     +F N++ +G+  
Sbjct: 427 ALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVA 486

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
             +TY  LIHA    GR +      SEM + G + +VI+YN LI  LC+   +D++  L 
Sbjct: 487 NGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALL 546

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDK 711
            +M  +GI PN ++Y +LINE C AG  ++AL L KEML++ + PD  T++ L+      
Sbjct: 547 EEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKV 606

Query: 712 DYKVHAVEYLESL 724
            +   A+  LE L
Sbjct: 607 GWTHAALNLLEKL 619



 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 151/505 (29%), Positives = 256/505 (50%), Gaps = 4/505 (0%)

Query: 201 RNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQ 260
           R  + P  ++ N ++  L        A  +YR M    + P+  T+     + C+ G   
Sbjct: 135 RFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAG 194

Query: 261 EALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII 320
           +AL LL  M   GC P+ V Y  +I      G + +A  L+ +ML +G     +++N ++
Sbjct: 195 DALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLV 254

Query: 321 CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
            G    G + EA  L + M+T+G  P++ TY  L+ GLC+  +  +A      ML +   
Sbjct: 255 LGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEA----CAMLGRLPE 310

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
            +++  NT++ G    G +  A  L++ + S+   P V TY+ L+ GLC+ G    A ++
Sbjct: 311 VNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRM 370

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
            + M  +G  P+++TY+ +++  C+ G    AR   ++ML KG   +   Y   I    K
Sbjct: 371 LDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCK 430

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
            G   +A RL +EM ++G  PD+ TYN +++ LC    +EEA  + R ++ +G + + IT
Sbjct: 431 DGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGIT 490

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           Y ++IHA L  G  + G  L + ML  G    +++Y  LI A    G ++ +     EM 
Sbjct: 491 YNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMV 550

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
            KGI+PN  +YN LIN LC+  ++  A  L  +M  +G+ P+  TY  LIN  C  G   
Sbjct: 551 TKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTH 610

Query: 681 EALRLYKEMLDREIEPDYCTHSALL 705
            AL L +++ +  + PD  T++ L+
Sbjct: 611 AALNLLEKLPNENVHPDIVTYNILI 635



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 150/479 (31%), Positives = 244/479 (50%), Gaps = 4/479 (0%)

Query: 193 LLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDS 252
           L +   M R+G +PD      +I  L   G   +A  +   M   G    + T+N ++  
Sbjct: 197 LALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLG 256

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
            C  G ++EA  L+  M  +GC P+ VTY  L+ G  R  + ++A      ML    +V+
Sbjct: 257 LCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACA----MLGRLPEVN 312

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
               N +I G   +G L  A  L E M ++G  P + TY+IL++GLCK GR   A     
Sbjct: 313 VVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLD 372

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
           EM  K   P+I++Y+TLL+ +CR+G   +A  + D++ ++        YN +I  LC+ G
Sbjct: 373 EMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDG 432

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
            L+ A +L + M +QG  PD+ TY  M+   C    +  A   F  ++ +G+  +   Y 
Sbjct: 433 KLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYN 492

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
           T I   L+ G   E  RL  EML  G   D+I+YN L+  LCK G+++ +  LL +MV  
Sbjct: 493 TLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTK 552

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
           G  P++ +Y  +I+   + G +R   +L   ML +GL+P +VTY  LI+     G    A
Sbjct: 553 GIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAA 612

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
                ++  + + P+++TYN LI+  C++R +D A  L       GI+PN+ T+ +++ 
Sbjct: 613 LNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQ 671



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 144/484 (29%), Positives = 235/484 (48%), Gaps = 7/484 (1%)

Query: 159 LDVLIGGGLSSCVSIKIL-DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
           L +L G     CV   +L   ++     +  V +  ++ ++ML  G   DV   N ++  
Sbjct: 197 LALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLG 256

Query: 218 LRDNG-FSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSP 276
           L   G     AR V RMM + G  PS+VTY  +L   C+  +  EA  +L    GR    
Sbjct: 257 LCGLGRVREAARLVDRMMTQ-GCMPSVVTYGFLLQGLCRTRQADEACAML----GRLPEV 311

Query: 277 NGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLE 336
           N V  N +I G    G+L +A  L   M   G     H+Y+ ++ G  + G    A+ + 
Sbjct: 312 NVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRML 371

Query: 337 EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS 396
           +EM  +G AP + TY+ L++  C+ G   DAR    +ML K    +   YN ++Y  C+ 
Sbjct: 372 DEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKD 431

Query: 397 GNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
           G + +A  L  E++S+   P + TYNT+I  LC    +E A+ +  N+I +G++ + ITY
Sbjct: 432 GKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITY 491

Query: 457 TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA 516
             +++   + G         +EML  G Q D  +Y   I    K G+   +  L EEM+ 
Sbjct: 492 NTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVT 551

Query: 517 KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
           KG  P+  +YN+L++ LCK G + +A EL ++M+  G  PD +TY ++I+   ++G    
Sbjct: 552 KGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHA 611

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
             +L   +  + + P +VTY +LI  H     L+ A M   +    GI PN  T+  ++ 
Sbjct: 612 ALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQ 671

Query: 637 GLCR 640
              R
Sbjct: 672 NFVR 675



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 160/349 (45%), Gaps = 9/349 (2%)

Query: 367 ARHRFFEMLRK-NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
           A H   +M R+  V P   SYN +L    R+    +A LL+  +    + PT  T+    
Sbjct: 125 ALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAA 184

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
             LCR G    A  L   M   G +PD + Y  +++     G ++ A    +EML  G  
Sbjct: 185 RALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCA 244

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
            D   +   + G   LG   EA RL + M+ +G  P ++TY  L+ GLC+    +EA  +
Sbjct: 245 ADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAM 304

Query: 546 LRKMVGDGFIPDH--ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
           L      G +P+   +   ++I   L  G L R  +L+  M  KG  P + TY++L+H  
Sbjct: 305 L------GRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGL 358

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
              GR   A     EM+ KG  PN++TY+ L++  CR    D A  +   M  +G   N 
Sbjct: 359 CKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNS 418

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
             Y  +I   C  G   +A RL +EM  +  +PD CT++ ++    + D
Sbjct: 419 QGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNND 467



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 104/221 (47%), Gaps = 21/221 (9%)

Query: 117 QPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGI-LDVLIGGGLSSCVSIKI 175
           + GV  +   + T++  L+ +G  +    +   ++   +HG  LDV+   GL     IK 
Sbjct: 481 EEGVVANGITYNTLIHALLRNGRWQEGLRLASEML---LHGCQLDVISYNGL-----IKA 532

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
           L        K+  V++ + +  +M+  G+ P+  + N +I  L   G    A E+ + M 
Sbjct: 533 L-------CKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEML 585

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
             G+ P IVTYNT+++  CK G    AL LL ++      P+ VTYN+LI+   +   L+
Sbjct: 586 NQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLD 645

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLE 336
            A  L+   +  G+  +  ++     G   +  + + +NLE
Sbjct: 646 DAAMLLDKAISGGIVPNERTW-----GMMVQNFVRQTVNLE 681


>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  265 bits (678), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 191/720 (26%), Positives = 328/720 (45%), Gaps = 62/720 (8%)

Query: 43  SNNKDSVLNPESESYYKELIISTVEEKPWAFCNNRWVSDHFQAVVSDPELLVRVLNRIRE 102
           S+++D+ L  E        +   ++  PW       ++   +  +  PEL+V V+ R+++
Sbjct: 54  SHSQDNALKSEGMRKTVHDVCRVLDTYPWGAALEDALNTFDE--MPQPELVVGVIRRLKD 111

Query: 103 KPRIALRFFRWVETQPGVKRDEFVFCTILEIL---------------------------- 134
             R+AL +FRWVE +         +  +L ++                            
Sbjct: 112 -VRVALHYFRWVERKTKQLHSPEAYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTC 170

Query: 135 -------IESGLLRSAYWVVETVVCVNM---HGILDVLIGGGLSSC-------------- 170
                  ++S  LR A+ V+ET+        +     LIG  LS+               
Sbjct: 171 IEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGA-LSAAHEADPMLTLLRQMQ 229

Query: 171 -----VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSV 225
                V++ +   L+ ++ ++  V+  L + ++M  N    D+   N  I      G   
Sbjct: 230 EIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVD 289

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
            A + +  +   G+ P  VT+ +M+   CK   + EA+EL  E+      P    YN +I
Sbjct: 290 MAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMI 349

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            G+   G+  +A  L+    + G   S  +YN I+     KG + EAL + E M     A
Sbjct: 350 MGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAM-KMDAA 408

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P L +YNILI  LCK G +  A      M    + P+II+ N ++   C++  + EA  +
Sbjct: 409 PNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSI 468

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
           F  L  +   P  VT+ +LIDGL R+G +  A  L E M++ G  P+ + YT ++    K
Sbjct: 469 FLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFK 528

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
            G      + + EM+ +G  PD       +    K G+  +   L EE+ A+G  PD+ +
Sbjct: 529 CGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRS 588

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           Y++L+HGL K G  ++  +L  +M   G   D   Y  +I    + G + +   L   M 
Sbjct: 589 YSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMK 648

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
            KGL PT+VTY  +I   A   RL+ A+M F E + K +  NV+ Y++LI+G  ++ RID
Sbjct: 649 TKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRID 708

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +AY +  ++ ++G+ PN YT+  L++    A    EAL  ++ M + +  P+  T+S ++
Sbjct: 709 EAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMV 768



 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 148/523 (28%), Positives = 265/523 (50%), Gaps = 1/523 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K   V+     F+++   GL+PD      +I VL       +A E++  +      P 
Sbjct: 282 FGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPC 341

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +  YNTM+  +   G+  EA  LL   + +GC P+ + YN ++T   R G++E+A  ++ 
Sbjct: 342 VYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILE 401

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M K+    +  SYN +I    + G L  AL +++ M   G+ P + T NI+I  LCK  
Sbjct: 402 AM-KMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQ 460

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R+ +A   F  +  K   PD +++ +L+ G  R G + +A++L++++      P  V Y 
Sbjct: 461 RLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYT 520

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           +LI    + G  E   ++ + M+++G  PD++     ++   K G +   R  F E+  +
Sbjct: 521 SLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQ 580

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           GL PD  +Y+  I G +K G + + Y+L  EM  +G   D   YN+++ G CK G + +A
Sbjct: 581 GLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKA 640

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            +LL +M   G  P  +TY S+I    ++  L     LF     K +   +V Y+ LI  
Sbjct: 641 YQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDG 700

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
               GR++ A++   E+  KG+ PN  T+N L++ L +   ID+A   F +M+     PN
Sbjct: 701 FGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPN 760

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           + TY+I++N  C    + +A   ++EM  + ++P+  T++ ++
Sbjct: 761 EVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMI 803



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 153/586 (26%), Positives = 281/586 (47%), Gaps = 16/586 (2%)

Query: 103 KPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVL 162
           K  +A +FF  +++Q G+  D+  F +++ +L ++  +  A  + E +            
Sbjct: 287 KVDMAWKFFHELKSQ-GLVPDDVTFTSMIGVLCKAERVDEAVELFEEL------------ 333

Query: 163 IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG 222
                 S   +   + +++ Y       +   +  +  R G +P V   N I+  L   G
Sbjct: 334 --DSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKG 391

Query: 223 FSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYN 282
              +A  +   M +    P++ +YN ++D  CK GE++ AL++   M+  G  PN +T N
Sbjct: 392 KVEEALRILEAM-KMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVN 450

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
           ++I    +   L++A  +   +        + ++  +I G    G + +A  L E+M+  
Sbjct: 451 IMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDS 510

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           G  P    Y  LI    K GR  D    + EM+ +   PD++  N  +    ++G I + 
Sbjct: 511 GQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKG 570

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
             LF+E++++ L P V +Y+ LI GL + G  +   +L   M  QG+  D   Y I+++G
Sbjct: 571 RALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDG 630

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            CK G ++ A +   EM  KGLQP    Y + I G  K+    EAY L EE  +K    +
Sbjct: 631 FCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLN 690

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
           ++ Y+ L+ G  K+G ++EA  +L +++  G  P+  T+  ++ A ++  ++      F 
Sbjct: 691 VVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQ 750

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
           NM      P  VTY+++++      +   AF+++ EMQ +G++PN ITY  +I+GL R+ 
Sbjct: 751 NMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVG 810

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
            + +A  LF   +  G +P+   Y  +I    NA    +A  L++E
Sbjct: 811 NVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEE 856



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 104/436 (23%), Positives = 181/436 (41%), Gaps = 33/436 (7%)

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
           SP  +   V +  F  +    Q   L  +    G++ + H    ++  Y     L +ALN
Sbjct: 36  SPPEMYGKVKVNSFVDDASHSQDNALKSE----GMRKTVHDVCRVLDTYPWGAALEDALN 91

Query: 335 LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR---HRFFEMLRKN-VIPDIISYNTLL 390
             +EM      P L      + G+ +  R+ D R   H F  + RK   +    +YN LL
Sbjct: 92  TFDEMPQ----PEL------VVGVIR--RLKDVRVALHYFRWVERKTKQLHSPEAYNALL 139

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
               R+ N+     + +E+      P+  T   ++    +   L  A  + E M      
Sbjct: 140 MLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFR 199

Query: 451 PDVITYTIMVNGSCKMGNLSMARE------FFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
           P    YT ++      G LS A E         +M   G +     +TT I    + G  
Sbjct: 200 PAYSAYTTLI------GALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRV 253

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
             A  L +EM +  F  DL+ YNV +    K+G ++ A +   ++   G +PD +T+TS+
Sbjct: 254 DAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSM 313

Query: 565 IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
           I    +   +    +LF  +      P +  Y  +I  + + G+   A+      + KG 
Sbjct: 314 IGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGC 373

Query: 625 RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
            P+VI YN ++  L R  ++++A  +   M+ +   PN  +Y ILI+  C AG  + AL+
Sbjct: 374 IPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAA-PNLTSYNILIDMLCKAGELEAALK 432

Query: 685 LYKEMLDREIEPDYCT 700
           +   M +  + P+  T
Sbjct: 433 VQDSMKEAGLFPNIIT 448



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 88/382 (23%), Positives = 153/382 (40%), Gaps = 22/382 (5%)

Query: 355 IYGLCKWGR-VSDARHRFFEMLR----KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           +YG  K    V DA H     L+    +  + D+     +L  Y     + +A   FDE+
Sbjct: 40  MYGKVKVNSFVDDASHSQDNALKSEGMRKTVHDVCR---VLDTYPWGAALEDALNTFDEM 96

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQ---QLKENMINQGILPDVITYTIMVNGSCKM 466
               LV  V+          R  D+ VA    +  E    Q   P+     +M+    + 
Sbjct: 97  PQPELVVGVIR---------RLKDVRVALHYFRWVERKTKQLHSPEAYNALLMLMARTR- 146

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
            NL    +   EM   G  P        +A  +K     EA+ + E M    F P    Y
Sbjct: 147 -NLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAY 205

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
             L+  L      +    LLR+M   G+      +T++I      G +     L + M  
Sbjct: 206 TTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKS 265

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
              +  LV Y V I      G++++A+ +F E++ +G+ P+ +T+ ++I  LC+  R+D+
Sbjct: 266 NSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDE 325

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
           A  LF +++    +P  Y Y  +I    + G + EA  L +    +   P    ++ +L 
Sbjct: 326 AVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILT 385

Query: 707 KQLDKDYKVHAVEYLESLTLGA 728
               K     A+  LE++ + A
Sbjct: 386 CLGRKGKVEEALRILEAMKMDA 407


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  265 bits (678), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 158/504 (31%), Positives = 261/504 (51%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V+  +  FN+ML     P +   N+I+           A  +   +   GI+P ++T N 
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++ FC  G++     +L ++  RG  P+ VT N LI G    G++++A      +L  G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            +++  SY  +I G  + G    A+ L  ++  R   P +  Y+ +I  LCK+  VS+A 
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAY 219

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F EM  K +  D+++Y+TL+YG+C  G + EA  L +E+  + + P V TYN L+D L
Sbjct: 220 GLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G ++ A+ +   M+   + PDVITY+ +++G   +  +  A+  FN M   G+ PD 
Sbjct: 280 CKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDV 339

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             YT  I G  K     EA  L +EM  K   P ++TY+ L+ GLCK G +    +L+ +
Sbjct: 340 HTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDE 399

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M   G   D ITY+S+I    + G L R   LFN M  + + P + T+T+L+      GR
Sbjct: 400 MRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGR 459

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           L+ A   F ++  KG   NV TYN +ING C+   +++A  +   ME+ G +PN +T+  
Sbjct: 460 LKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFET 519

Query: 669 LINENCNAGNWQEALRLYKEMLDR 692
           +I          +A +L ++M+ R
Sbjct: 520 IIIALFKKDENDKAEKLLRQMIAR 543



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 145/484 (29%), Positives = 249/484 (51%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P I+ +N +LDSF K      A+ L   ++ +G  P+ +T N+LI  F   G++     +
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  +LK G      + N +I G   KG + +AL+  ++++ +G      +Y  LI G+CK
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G    A     ++  +   P++  Y+T++   C+   + EA+ LF E+  + +   VVT
Sbjct: 177 IGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 236

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y+TLI G C  G L+ A  L   M+ + I P+V TY I+V+  CK G +  A+     ML
Sbjct: 237 YSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML 296

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           +  ++PD   Y+T + G   + +  +A  +   M   G  PD+ TY +L++G CK   ++
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD 356

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA  L ++M     +P  +TY+S+I    + G +    DL + M  +G    ++TY+ LI
Sbjct: 357 EALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLI 416

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                 G L+ A   F++M+ + IRPN+ T+  L++GLC+  R+  A  +F D+  +G  
Sbjct: 417 DGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYH 476

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
            N YTY ++IN +C  G  +EAL +  +M D    P+  T   +++    KD    A + 
Sbjct: 477 LNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKL 536

Query: 721 LESL 724
           L  +
Sbjct: 537 LRQM 540



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 120/410 (29%), Positives = 199/410 (48%), Gaps = 35/410 (8%)

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
           +A++    M+     P +  +N ++    K    S A      +  K + PD+I+ N L+
Sbjct: 42  DAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILI 101

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
             +C  G I   F +  ++  R   P  VT NTLI GLC  G ++ A    + ++ QG  
Sbjct: 102 NCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQ 161

Query: 451 PDVITYTIMVNGSCKMGN-----------------------------------LSMAREF 475
            + ++Y  ++NG CK+G+                                   +S A   
Sbjct: 162 LNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGL 221

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
           F+EM  KG+  D   Y+T I G    G   EA  L  EM+ K   P++ TYN+LV  LCK
Sbjct: 222 FSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCK 281

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
            G ++EA  +L  M+     PD ITY++++     + ++++ + +FN M   G++P + T
Sbjct: 282 EGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHT 341

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           YT+LI+       ++ A   F EM  K + P ++TY++LI+GLC+  RI   + L  +M 
Sbjct: 342 YTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMR 401

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           + G   +  TY+ LI+  C  G+   A+ L+ +M D+EI P+  T + LL
Sbjct: 402 DRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILL 451



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 102/342 (29%), Positives = 176/342 (51%)

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           V DA  +F  ML     P II +N +L  + +  +   A  L   L  + + P ++T N 
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           LI+  C  G +     +   ++ +G  PD +T   ++ G C  G +  A  F +++L +G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
            Q ++ +Y T I G  K+GDT  A +L  ++  +   P++  Y+ ++  LCK   + EA 
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAY 219

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
            L  +M   G   D +TY+++I+     G L+    L N M+ K ++P + TY +L+ A 
Sbjct: 220 GLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
              G+++ A    + M    ++P+VITY+ L++G   +  + +A  +F  M   G+ P+ 
Sbjct: 280 CKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDV 339

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +TYTILIN  C      EAL L+KEM  + + P   T+S+L+
Sbjct: 340 HTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLI 381


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  265 bits (678), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 146/454 (32%), Positives = 241/454 (53%)

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
           + G +P  VT++T+++  C EG + EALEL+  M   G  P  +T N L+ G   NG++ 
Sbjct: 135 KLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVS 194

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
            A  LI  M++ G + +  +Y P++    + G    A+ L  +M  R +      Y+I+I
Sbjct: 195 DAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIII 254

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
            GLCK G + +A + F EM  K    DII Y TL+ G+C +G   +   L  ++  R + 
Sbjct: 255 DGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKIT 314

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P VV ++ LID   + G L  A++L + MI +GI PD +TYT +++G CK   L  A   
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM 374

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
            + M+ KG  P+   +   I G  K     +   L  +M  +G   D +TYN L+ G C+
Sbjct: 375 LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 434

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
           LG LE A EL ++MV     PD ++Y  ++    + G+  +  ++F  + +  +   +  
Sbjct: 435 LGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGI 494

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           Y ++IH      +++ A+  F  + +KG++P+V TYN +I GLC+   + +A  LF  ME
Sbjct: 495 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME 554

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           E+G  PN  TY ILI  +   G+  ++ +L +E+
Sbjct: 555 EDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI 588



 Score =  258 bits (659), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 143/530 (26%), Positives = 276/530 (52%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F +M R+   P + + +R+  V+          ++ + M   GI  ++ T + M++  C
Sbjct: 59  LFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCC 118

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           +  ++  A   + ++   G  P+ VT++ LI G    G + +A  L+  M+++G K +  
Sbjct: 119 RCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLI 178

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           + N ++ G    G + +A+ L + MV  G  P   TY  ++  +CK G+ + A     +M
Sbjct: 179 TLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKM 238

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
             + +  D + Y+ ++ G C+ G++  AF LF+E+  +     ++ Y TLI G C  G  
Sbjct: 239 EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           +   +L  +MI + I PDV+ ++ +++   K G L  A E   EM+++G+ PD   YT+ 
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I G  K     +A  + + M++KG  P++ T+N+L++G CK   +++  EL RKM   G 
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
           + D +TY ++I    E+G L   ++LF  M+ + + P +V+Y +L+      G  E A  
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F +++   +  ++  YN +I+G+C   ++D A+ LF  +  +G+ P+  TY I+I   C
Sbjct: 479 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLC 538

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
             G+  EA  L+++M +    P+ CT++ L+   L +     + + +E +
Sbjct: 539 KKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI 588



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 157/496 (31%), Positives = 253/496 (51%), Gaps = 15/496 (3%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G + D   F T++  L   G +  A  +V+ +V +     L  L       C++ K+ D 
Sbjct: 137 GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA 196

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           +LLI              ++M+  G  P+      ++KV+  +G +  A E+ R M E  
Sbjct: 197 VLLI--------------DRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERK 242

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           IK   V Y+ ++D  CK+G +  A  L  EM+ +G   + + Y  LI GF   G  +   
Sbjct: 243 IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGA 302

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L+RDM+K  +     +++ +I  + ++G L EA  L +EM+ RG++P   TY  LI G 
Sbjct: 303 KLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGF 362

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           CK  ++  A H    M+ K   P+I ++N L+ GYC++  I +   LF ++  R +V   
Sbjct: 363 CKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADT 422

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           VTYNTLI G C  G LEVA++L + M+++ + PD+++Y I+++G C  G    A E F +
Sbjct: 423 VTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEK 482

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           + +  ++ D   Y   I G        +A+ L   +  KG  PD+ TYN+++ GLCK GS
Sbjct: 483 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGS 542

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           L EA+ L RKM  DG  P+  TY  +I A L  GD  +   L   + R G S    T  +
Sbjct: 543 LSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKM 602

Query: 599 LIHAHAARGRLELAFM 614
           ++    + GRL+ +F+
Sbjct: 603 VVDM-LSDGRLKKSFL 617



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 124/450 (27%), Positives = 223/450 (49%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V + L + ++M+  G  P +   N ++  L  NG    A  +   M E G +P+ VTY  
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +L   CK G+   A+ELL +M+ R    + V Y+++I G  ++G L+ A  L  +M   G
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            K     Y  +I G+   G   +   L  +M+ R + P +  ++ LI    K G++ +A 
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               EM+++ + PD ++Y +L+ G+C+   + +A  + D + S+   P + T+N LI+G 
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGY 397

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+   ++   +L   M  +G++ D +TY  ++ G C++G L +A+E F EM+ + ++PD 
Sbjct: 398 CKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDI 457

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
            +Y   + G    G+  +A  + E++       D+  YN+++HG+C    +++A +L   
Sbjct: 458 VSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCS 517

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           +   G  PD  TY  +I    + G L     LF  M   G SP   TY +LI AH   G 
Sbjct: 518 LPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGD 577

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGL 638
              +     E++  G   +  T   +++ L
Sbjct: 578 ATKSAKLIEEIKRCGFSVDASTVKMVVDML 607



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 160/316 (50%), Gaps = 5/316 (1%)

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           +A  LF E+      P ++ ++ L   + R    ++   L + M  +GI  ++ T +IM+
Sbjct: 55  DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
           N  C+   LS+A     ++++ G +PD   ++T I G    G  SEA  L + M+  G  
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           P LIT N LV+GLC  G + +A  L+ +MV  GF P+ +TY  ++    + G      +L
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
              M  + +    V Y+++I      G L+ AF  F+EM++KG + ++I Y  LI G C 
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
             R D    L  DM +  I P+   ++ LI+     G  +EA  L+KEM+ R I PD  T
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT 354

Query: 701 HSALL-----LKQLDK 711
           +++L+       QLDK
Sbjct: 355 YTSLIDGFCKENQLDK 370



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 168/376 (44%), Gaps = 35/376 (9%)

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            DA   F EM R    P +I ++ L     R+        L  ++  + +   + T + +
Sbjct: 54  DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           I+  CR   L +A      +I  G  PD +T++ ++NG C  G +S A E  + M+  G 
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP----------------------- 521
           +P        + G    G  S+A  L + M+  GF P                       
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233

Query: 522 ------------DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
                       D + Y++++ GLCK GSL+ A  L  +M   GF  D I YT++I    
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
             G    G  L  +M+++ ++P +V ++ LI      G+L  A     EM  +GI P+ +
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           TY +LI+G C+  ++D+A  +   M  +G  PN  T+ ILIN  C A    + L L+++M
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413

Query: 690 LDREIEPDYCTHSALL 705
             R +  D  T++ L+
Sbjct: 414 SLRGVVADTVTYNTLI 429


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  265 bits (678), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 147/480 (30%), Positives = 244/480 (50%), Gaps = 5/480 (1%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A  + + MG  G +P++V Y T++ +F ++    +A+ +L EM+ +G +P+   YN LI 
Sbjct: 439 AYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLII 498

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G S+  ++++AR  + +M++ G K  A +Y   I GY E G    A    +EM+  GV P
Sbjct: 499 GLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIP 558

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
                  LI   CK G+V +A   F  M+ + ++ D  +Y  L+ G  ++G + +A  +F
Sbjct: 559 NKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIF 618

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
            E+R + + P V +Y TLIDG  + G+++ A  + + M+  G+  +VI Y +++ G C+ 
Sbjct: 619 HEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRS 678

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G +  A+E  +EM  KG  P+   Y T I G  K GD +EA++L +EM  KG  PD   Y
Sbjct: 679 GEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVY 738

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
             LV G C+L  +E A  +       G       + ++I+   + G      D+ N ++ 
Sbjct: 739 TTLVDGCCRLNDVERAITIFETN-EKGCASSSAPFNALINWVFKFGKTELTTDMINRLMD 797

Query: 587 KGLS----PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
                   P  VTY ++I      G LE A   F  MQ   + P VITY +L+NG  ++ 
Sbjct: 798 GSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMG 857

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
           R  + + +F ++   GI P+   Y+++IN     G   +AL L  +M  +    D C  S
Sbjct: 858 RRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLS 917



 Score =  261 bits (668), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 151/483 (31%), Positives = 247/483 (51%), Gaps = 6/483 (1%)

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           +A E+ + M   G+ PS  +YN ++D  CK+  +++A  LL EM   G   + V Y++LI
Sbjct: 263 EALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILI 322

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            G  +    + A GL+ +M+  G  +    Y+  IC  S++G + +A  L + M+T GV 
Sbjct: 323 DGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVT 382

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P    Y  LI G  +   V        E+ ++N++    +Y T + G C SG++  A+ +
Sbjct: 383 PGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNI 442

Query: 406 FDELRSRNLVPTVVTYNTLIDGL---CRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
             E+ +    P VV Y TLI       R+GD   A ++ + M  QGI PD   Y  ++ G
Sbjct: 443 VKEMGASGCRPNVVIYTTLIKTFLQKSRFGD---AVRVLKEMREQGIAPDTFCYNSLIIG 499

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
             K   +  AR F  EM+  G +PD F Y   I+G ++ G+ + A +  +EML  G  P+
Sbjct: 500 LSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPN 559

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
            +    L++  CK G + EA    R MV  G + D  TYT +++  ++ G +    ++F+
Sbjct: 560 KVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFH 619

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
            M  KG++P + +Y  LI   +  G ++ A   F EM   G+  NVI YN L+ G CR  
Sbjct: 620 EMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSG 679

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
            I++A  L  +M  +G  PN  TY  +I+  C +G+  EA +L+ EM  + + PD   ++
Sbjct: 680 EIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYT 739

Query: 703 ALL 705
            L+
Sbjct: 740 TLV 742



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 167/568 (29%), Positives = 271/568 (47%), Gaps = 26/568 (4%)

Query: 125 FVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSC-VSIKILDLLLLIY 183
           + + T ++ +  SG L  AY +V+ +               G S C  ++ I   L+  +
Sbjct: 421 YTYGTAVKGMCSSGDLDGAYNIVKEM---------------GASGCRPNVVIYTTLIKTF 465

Query: 184 TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
            +KS     + V  +M   G+ PD    N +I  L       +AR     M E G KP  
Sbjct: 466 LQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDA 525

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
            TY   +  + + GE   A + + EM   G  PN V    LI  + + G++ +A    R 
Sbjct: 526 FTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRS 585

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M++ G+   A +Y  ++ G  + G + +A  +  EM  +G+AP + +Y  LI G  K G 
Sbjct: 586 MVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGN 645

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           +  A   F EM++  +  ++I YN LL G+CRSG I +A  L DE+  +   P  VTY T
Sbjct: 646 MQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCT 705

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           +IDG C+ GDL  A QL + M  +G++PD   YT +V+G C++ ++  A   F E   KG
Sbjct: 706 IIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-ETNEKG 764

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAY----RLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
                  +   I    K G T        RL +    K   P+ +TYN+++  LCK G+L
Sbjct: 765 CASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNL 824

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           E A EL   M     +P  ITYTS+++   +MG       +F+ ++  G+ P  + Y+V+
Sbjct: 825 EAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVI 884

Query: 600 IHAHAARGRLELAFMYFSEMQVK-----GIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           I+A    G    A +   +M  K     G + ++ T  AL++G  ++  ++ A  +  +M
Sbjct: 885 INAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENM 944

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEA 682
                +P+  T   LINE+C + N + A
Sbjct: 945 VRLKYIPDSSTVIELINESCISSNQRMA 972



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 153/483 (31%), Positives = 230/483 (47%), Gaps = 30/483 (6%)

Query: 109 RFFRWVETQPGVKRDEFVFCTILEILIESGLLRSA-YWVVETVVCVNMHGIL--DVLIGG 165
           R F     + G K D F +   +   IE+G   SA  +V E + C    G++   VL  G
Sbjct: 510 RSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLEC----GVIPNKVLCTG 565

Query: 166 GLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSV 225
                        L+  Y KK  V +    F  M+  G+L D K    ++  L  NG   
Sbjct: 566 -------------LINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVN 612

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
            A E++  M   GI P + +Y T++D F K G MQ+A  +  EM   G + N + YN+L+
Sbjct: 613 DAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLL 672

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            GF R+GE+E+A+ L+ +M   G   +A +Y  II GY + G L EA  L +EM  +G+ 
Sbjct: 673 GGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLV 732

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P    Y  L+ G C+   V  A    FE   K        +N L+    + G       +
Sbjct: 733 PDSFVYTTLVDGCCRLNDVERA-ITIFETNEKGCASSSAPFNALINWVFKFGKTELTTDM 791

Query: 406 FDELRSRNL----VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
            + L   +      P  VTYN +ID LC+ G+LE A++L  +M    ++P VITYT ++N
Sbjct: 792 INRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLN 851

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
           G  KMG  S     F+E++  G++PD   Y+  I   LK G T++A  L ++M AK    
Sbjct: 852 GYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVD 911

Query: 522 D-----LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
           D     + T   L+ G  K+G +E A +++  MV   +IPD  T   +I+ S    + R 
Sbjct: 912 DGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELINESCISSNQRM 971

Query: 577 GRD 579
             D
Sbjct: 972 AAD 974



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 123/432 (28%), Positives = 197/432 (45%), Gaps = 23/432 (5%)

Query: 316 YNPIICGYSEKGLLVEALNL--EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
           +  +I GY EKG L EA+ +    + +   + P+LA  N L+  L K  R+      +  
Sbjct: 155 FGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYKG 214

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNI--------------GEAFLLFDE-------LRSR 412
           M+ +NV+ D+ SY  L+  +CR GN+              G A L  DE       +  +
Sbjct: 215 MVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSCK 274

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
            LVP+  +YN LIDGLC+   LE A+ L   M + G+  D + Y+I+++G  K  N   A
Sbjct: 275 GLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAA 334

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
               +EM+  G   D   Y   I    K G   +A  L + M+  G  P    Y  L+ G
Sbjct: 335 NGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEG 394

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
             +  ++ +  ELL ++     +    TY + +      GDL    ++   M   G  P 
Sbjct: 395 FFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPN 454

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
           +V YT LI     + R   A     EM+ +GI P+   YN+LI GL + +++D+A    +
Sbjct: 455 VVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLL 514

Query: 653 DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
           +M E G  P+ +TY   I+    AG +  A +  KEML+  + P+    + L+ +   K 
Sbjct: 515 EMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKG 574

Query: 713 YKVHAVEYLESL 724
             + A     S+
Sbjct: 575 KVIEACSAFRSM 586



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 97/254 (38%), Gaps = 80/254 (31%)

Query: 523 LITYNVLVHGLCKLGSLEEANEL---------------------LRKMVG---------- 551
           L +++ L   LC  GS+E+A+ +                     LR+ VG          
Sbjct: 97  LDSFSFLALDLCNFGSIEKAHSVVIRMIERKWPVAEVWSSIVRCLREFVGKSDDRVLLFG 156

Query: 552 ---DGFIPDH------ITYTSIIHASLEM------------GDLRRGR-----DLFNNML 585
              DG+I           ++S     L++              L+R R     D++  M+
Sbjct: 157 ILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYKGMV 216

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLEL---------------------AFMYFSEMQVKGI 624
            + +   + +Y +LI AH   G ++L                     A      M  KG+
Sbjct: 217 ERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSCKGL 276

Query: 625 RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
            P+  +YN LI+GLC+ +R++ A  L ++M   G+  +   Y+ILI+      N   A  
Sbjct: 277 VPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANG 336

Query: 685 LYKEMLDR--EIEP 696
           L  EM+     I+P
Sbjct: 337 LVHEMVSHGFSIDP 350


>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g31840
 gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 840

 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 169/589 (28%), Positives = 278/589 (47%), Gaps = 71/589 (12%)

Query: 186 KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVT 245
           K  V + L     ++  G    + +CN+++K L  +   V +R +  ++ + G  P++VT
Sbjct: 230 KGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASR-LLSLVLDCGPAPNVVT 288

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           + T+++ FCK GEM  A +L   M+ RG  P+ + Y+ LI G+ + G L     L    L
Sbjct: 289 FCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQAL 348

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
             G+K+    ++  I  Y + G L  A  + + M+ +G++P + TY ILI GLC+ GR+ 
Sbjct: 349 HKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIY 408

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY---- 421
           +A   + ++L++ + P I++Y++L+ G+C+ GN+   F L++++      P VV Y    
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468

Query: 422 -------------------------------NTLIDGLCRYGDLEVAQQLKENMINQGIL 450
                                          N+LIDG CR    + A ++   M   GI 
Sbjct: 469 DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIK 528

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG---------ELKL 501
           PDV T+T ++  S   G L  A   F  M + GL+PD  AY T I            L+L
Sbjct: 529 PDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQL 588

Query: 502 GD--------------------------TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
            D                            +A +    ++     PD++TYN ++ G C 
Sbjct: 589 FDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCS 648

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
           L  L+EA  +   +    F P+ +T T +IH   +  D+     +F+ M  KG  P  VT
Sbjct: 649 LRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVT 708

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           Y  L+   +    +E +F  F EMQ KGI P++++Y+ +I+GLC+  R+D+A  +F    
Sbjct: 709 YGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI 768

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
           +  +LP+   Y ILI   C  G   EA  LY+ ML   ++PD     AL
Sbjct: 769 DAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 178/715 (24%), Positives = 316/715 (44%), Gaps = 111/715 (15%)

Query: 96  VLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNM 155
           VL  +  +P  AL++FRW E    +   +  F TI  +LI +G+   A  V + ++  N 
Sbjct: 75  VLLSLESEPNSALKYFRWAE----ISGKDPSFYTIAHVLIRNGMFDVADKVFDEMI-TNR 129

Query: 156 HGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLV-------------------- 195
               +VL G      +   +   L+    +  MV++ L +                    
Sbjct: 130 GKDFNVL-GSIRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRML 188

Query: 196 ---------------FNKMLRNGLLPD-VKNCNRIIKVLRDNGFSVKAREVYRMMGEFGI 239
                          F+K+ R G+ P  V     ++  L   G   KA + +R++ E G 
Sbjct: 189 NSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGF 248

Query: 240 K----------------------------------PSIVTYNTMLDSFCKEGEMQEALEL 265
           +                                  P++VT+ T+++ FCK GEM  A +L
Sbjct: 249 RVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDL 308

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
              M+ RG  P+ + Y+ LI G+ + G L     L    L  G+K+    ++  I  Y +
Sbjct: 309 FKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVK 368

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
            G L  A  + + M+ +G++P + TY ILI GLC+ GR+ +A   + ++L++ + P I++
Sbjct: 369 SGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVT 428

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           Y++L+ G+C+ GN+   F L++++      P VV Y  L+DGL + G +  A +    M+
Sbjct: 429 YSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKML 488

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
            Q I  +V+ +  +++G C++     A + F  M   G++PD   +TT +   +  G   
Sbjct: 489 GQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLE 548

Query: 506 EAYRLQEEMLAKGFPPDLITY-----------------------------------NVLV 530
           EA  L   M   G  PD + Y                                   NV++
Sbjct: 549 EALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVI 608

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
           H L K   +E+A++    ++     PD +TY ++I     +  L     +F  +      
Sbjct: 609 HLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFG 668

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           P  VT T+LIH       ++ A   FS M  KG +PN +TY  L++   +   I+ ++ L
Sbjct: 669 PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKL 728

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           F +M+E+GI P+  +Y+I+I+  C  G   EA  ++ + +D ++ PD   ++ L+
Sbjct: 729 FEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILI 783



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 136/520 (26%), Positives = 247/520 (47%), Gaps = 50/520 (9%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           A   F+ +E Q G++ D   + T+++   ++G+L   + +    +   +   LDV++   
Sbjct: 305 AFDLFKVME-QRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVK--LDVVV--- 358

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
            SS + +         Y K   +    +V+ +ML  G+ P+V     +IK L  +G   +
Sbjct: 359 FSSTIDV---------YVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYE 409

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A  +Y  + + G++PSIVTY++++D FCK G ++    L  +M   G  P+ V Y VL+ 
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G S+ G +  A      ML   ++++   +N +I G+       EAL +   M   G+ P
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR----------- 395
            +AT+  ++      GR+ +A   FF M +  + PD ++Y TL+  +C+           
Sbjct: 530 DVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLF 589

Query: 396 --------SGNIG----------------EAFLLFDELRSRNLVPTVVTYNTLIDGLCRY 431
                   S +I                 +A   F+ L    + P +VTYNT+I G C  
Sbjct: 590 DLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSL 649

Query: 432 GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAY 491
             L+ A+++ E +      P+ +T TI+++  CK  ++  A   F+ M  KG +P+   Y
Sbjct: 650 RRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTY 709

Query: 492 TTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
              +    K  D   +++L EEM  KG  P +++Y++++ GLCK G ++EA  +  + + 
Sbjct: 710 GCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAID 769

Query: 552 DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
              +PD + Y  +I    ++G L     L+ +MLR G+ P
Sbjct: 770 AKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 809



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/358 (24%), Positives = 164/358 (45%), Gaps = 37/358 (10%)

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
           N G+ F +   +R R+L   V  +  L++  CRYG ++ A ++       G++    +  
Sbjct: 128 NRGKDFNVLGSIRDRSLDADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVY 185

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF-AYTTQIAGELKLGDTSEAYRLQEEMLA 516
            M+N       + +  + F+++ R G++P    A+   +      G+ ++A      ++ 
Sbjct: 186 RMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVME 245

Query: 517 KGF----------------------------------PPDLITYNVLVHGLCKLGSLEEA 542
           +GF                                   P+++T+  L++G CK G ++ A
Sbjct: 246 RGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRA 305

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            +L + M   G  PD I Y+++I    + G L  G  LF+  L KG+   +V ++  I  
Sbjct: 306 FDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDV 365

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
           +   G L  A + +  M  +GI PNV+TY  LI GLC+  RI +A+G++  + + G+ P+
Sbjct: 366 YVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPS 425

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
             TY+ LI+  C  GN +    LY++M+     PD   +  L+     +   +HA+ +
Sbjct: 426 IVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRF 483


>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Brachypodium distachyon]
          Length = 886

 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 163/559 (29%), Positives = 284/559 (50%), Gaps = 38/559 (6%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + +   ++  L +   M R G +P   NC+ ++  LR  G   +A  +   +GE  + P+
Sbjct: 277 FCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPN 336

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           I  YN +L++ CK G   EA  L+ EM  +G  PN VTY +LI    + G ++ A  ++ 
Sbjct: 337 IFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLD 396

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M + G++++ + YN +I    +K  L  A+    EMV  G+ P  A+Y+ +I GLC+ G
Sbjct: 397 RMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKG 456

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            +S A     +M  K V  +  ++  L+ G+C++  + EA  LF+++   NL P  VT+N
Sbjct: 457 DLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFN 516

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            +I+G C  GD+  A QL + M+ +G+ PD  TY  +++G C     S A+EF  ++   
Sbjct: 517 AVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENN 576

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
               ++F+ T  + G  + G  +EAY +  EM   G   DLI++ ++V+   K    E++
Sbjct: 577 CSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKS 636

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH- 601
             L R+M   G  PD++ +T +I+   + G++ +  + ++ M+  G  P  VTYT L++ 
Sbjct: 637 CVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNN 696

Query: 602 -------------------AH---------------AARGRLELAF-MYFSEMQVKGIRP 626
                              +H               A  G LE A  +YF+ +Q  G   
Sbjct: 697 LCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFAMLQ--GFLA 754

Query: 627 NVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLY 686
           N+++ N LI G C++ +I +A  L     E G  P+  +Y+ +I+E C  G+  EA+ L+
Sbjct: 755 NIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIHELCKKGDINEAIELW 814

Query: 687 KEMLDREIEPDYCTHSALL 705
            EML + ++PD   ++ L+
Sbjct: 815 NEMLYKGVKPDIVAYNILI 833



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 153/546 (28%), Positives = 253/546 (46%), Gaps = 35/546 (6%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F+ ML +G+L D       I+   +      A+ +   M + G K S V YN ++   C
Sbjct: 184 LFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGAKGLVARMQDEGDKVSAVPYNVLIYGLC 243

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA- 313
           K   ++EA+++   M  RG + + VT   L+ GF R  EL+ A  +  DM +LG   S  
Sbjct: 244 KNQRVREAVDVKNSMLARGVAADEVTCRTLVYGFCRTEELDMALEMTGDMARLGFVPSEA 303

Query: 314 ----------------------------------HSYNPIICGYSEKGLLVEALNLEEEM 339
                                              +YN ++    + G+  EA  L  EM
Sbjct: 304 NCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEM 363

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
             +G+ P   TY ILI+ LCK G + DA      M  K V   +  YN+L+   C+  ++
Sbjct: 364 SDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDL 423

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
             A     E+    L P   +Y+ +I GLCR GDL  A +L   M  +G+  +  T+T +
Sbjct: 424 DMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTAL 483

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           +NG CK   +  A   FN+M    L+P+   +   I G   +GD  +A++L ++M+ +G 
Sbjct: 484 INGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGL 543

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
            PD  TY  L+ GLC      +A E +  +  +  + +  + T+++H     G L     
Sbjct: 544 TPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYH 603

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
           ++N M   G    L+++T++++A   +   E + + F EM+ KG+RP+ + +  +IN   
Sbjct: 604 VWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYS 663

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
           +   + QA   + +M  +G LPN  TYT L+N  C + +   A  L KEML     P+  
Sbjct: 664 KEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSY 723

Query: 700 THSALL 705
           T +  L
Sbjct: 724 TFNCFL 729



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 153/563 (27%), Positives = 270/563 (47%), Gaps = 38/563 (6%)

Query: 195 VFNKMLRNGLLPDVKNCNRII-KVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
           V +  L  G+ PD    ++I+  +++   F++ AR ++  M   G+      Y   + ++
Sbjct: 149 VLHLSLSAGIAPDQHTASQILFSLVKIRQFAL-ARHLFDGMLHSGVLLDEYVYTAGIRAY 207

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           C+   +  A  L+  MQ  G   + V YNVLI G  +N  + +A  +   ML  G+    
Sbjct: 208 CEVRNLDGAKGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADE 267

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
            +   ++ G+     L  AL +  +M   G  P+ A  + ++ GL K GRV +A     +
Sbjct: 268 VTCRTLVYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQ 327

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           +    ++P+I +YN LL   C++G   EA  L +E+  + L P  VTY  LI  LC+ G 
Sbjct: 328 LGELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGM 387

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           ++ A  + + M  +G+   V  Y  ++N  CK  +L MA  F +EM+  GL P+  +Y+ 
Sbjct: 388 MDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSP 447

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            IAG  + GD S A  L  +M  KG   +  T+  L++G CK   ++EA+ L  KM    
Sbjct: 448 VIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESN 507

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY----------------- 596
             P+ +T+ ++I     +GD+R+   L++ M+ +GL+P   TY                 
Sbjct: 508 LEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAK 567

Query: 597 ------------------TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
                             T L+H     GRL  A+  ++EM + G + ++I++  ++   
Sbjct: 568 EFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAA 627

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
            +    +++  LF +M+E+G+ P+   +T +IN     GN  +AL  + EM+     P+ 
Sbjct: 628 LKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNT 687

Query: 699 CTHSALLLKQLDKDYKVHAVEYL 721
            T++A L+  L K + + + E L
Sbjct: 688 VTYTA-LVNNLCKSWHLSSAELL 709



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 136/495 (27%), Positives = 239/495 (48%), Gaps = 38/495 (7%)

Query: 180 LLIYT--KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +LI++  K+ M++  L + ++M   G+   V   N +I           A      M E 
Sbjct: 377 ILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEI 436

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G+ P+  +Y+ ++   C++G++  A+EL  +M  +G + N  T+  LI GF +  ++++A
Sbjct: 437 GLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEA 496

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L   M +  L+ +  ++N +I GY   G + +A  L ++M+ RG+ P   TY  LI G
Sbjct: 497 SRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISG 556

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF-------------- 403
           LC     S A+    ++     + +  S   LL+G+CR G + EA+              
Sbjct: 557 LCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLD 616

Query: 404 ---------------------LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
                                +LF E++ + + P  V +  +I+   + G++  A    +
Sbjct: 617 LISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWD 676

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            MI  G LP+ +TYT +VN  CK  +LS A     EML     P+ + +   +      G
Sbjct: 677 EMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEG 736

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
           +   A  L   ML +GF  ++++ N L+ G CK+G ++EA +L+ +   +GF PD I+Y+
Sbjct: 737 NLETAKDLYFAML-QGFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYS 795

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
           ++IH   + GD+    +L+N ML KG+ P +V Y +LI      G  +     + +M  K
Sbjct: 796 TVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIRWCNIHGESDKCLGIYIDMVKK 855

Query: 623 GIRPNVITYNALING 637
           G++PN  T+ AL  G
Sbjct: 856 GVQPNWHTHRALFVG 870



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 192/420 (45%), Gaps = 35/420 (8%)

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
           ++ G+AP   T + +++ L K  + + ARH F  ML   V+ D   Y   +  YC   N+
Sbjct: 154 LSAGIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNL 213

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
             A  L   ++      + V YN LI GLC+   +  A  +K +M+ +G+  D +T   +
Sbjct: 214 DGAKGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTL 273

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDR------------------------------- 488
           V G C+   L MA E   +M R G  P                                 
Sbjct: 274 VYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRM 333

Query: 489 ----FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
               FAY   +    K G  SEA RL  EM  KG  P+ +TY +L+H LCK G +++A  
Sbjct: 334 VPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALC 393

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           +L +M   G       Y S+I+   +  DL       + M+  GL+P   +Y+ +I    
Sbjct: 394 MLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLC 453

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
            +G L  A     +M  KG+  N  T+ ALING C+ +++D+A  LF  M E  + PN+ 
Sbjct: 454 RKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEV 513

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           T+  +I   C  G+ ++A +LY +M+ R + PD  T+ +L+      D    A E++  L
Sbjct: 514 TFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADL 573



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 145/291 (49%), Gaps = 1/291 (0%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
           L  LL  + ++  + +   V+N+M   G   D+ +   I+        S K+  ++R M 
Sbjct: 585 LTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMK 644

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
           E G++P  V +  M++ + KEG M +AL    EM   G  PN VTY  L+    ++  L 
Sbjct: 645 EKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLS 704

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
            A  L ++ML      +++++N  +  ++ +G L  A +L   M+ +G    + + N LI
Sbjct: 705 SAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFAML-QGFLANIVSVNTLI 763

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
            G CK G++ +A             PD ISY+T+++  C+ G+I EA  L++E+  + + 
Sbjct: 764 KGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIHELCKKGDINEAIELWNEMLYKGVK 823

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
           P +V YN LI     +G+ +    +  +M+ +G+ P+  T+  +  G+  M
Sbjct: 824 PDIVAYNILIRWCNIHGESDKCLGIYIDMVKKGVQPNWHTHRALFVGTSLM 874



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 3/129 (2%)

Query: 161 VLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRD 220
            ++ G L++ VS+   + L+  + K   +++ + + ++   NG  PD  + + +I  L  
Sbjct: 747 AMLQGFLANIVSV---NTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIHELCK 803

Query: 221 NGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVT 280
            G   +A E++  M   G+KP IV YN ++      GE  + L +  +M  +G  PN  T
Sbjct: 804 KGDINEAIELWNEMLYKGVKPDIVAYNILIRWCNIHGESDKCLGIYIDMVKKGVQPNWHT 863

Query: 281 YNVLITGFS 289
           +  L  G S
Sbjct: 864 HRALFVGTS 872


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  265 bits (677), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 143/379 (37%), Positives = 217/379 (57%), Gaps = 4/379 (1%)

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           KARE    M   G KP++V+YNT++  +   G ++ A  +L  M+ +G  P+  TY  LI
Sbjct: 191 KAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLI 250

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
           +G  + G LE+A GL   M+++GL  +A +YN +I GY  KG L  A +  +EMV +G+ 
Sbjct: 251 SGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIM 310

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P+++TYN+L++ L   GR+ +A     EM +K +IPD I+YN L+ GY R GN   AF L
Sbjct: 311 PSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDL 370

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
            +E+ S+ + PT VTY +LI  L R   ++ A  L E +++QG+ PDVI +  M++G C 
Sbjct: 371 HNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCA 430

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
            GN+  A     EM RK + PD   + T + G  + G   EA  L +EM  +G  PD I+
Sbjct: 431 NGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHIS 490

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH--ASLEMGDLRRGRDLFNN 583
           YN L+ G  + G +++A  +  +M+  GF P  +TY ++I      + GDL    +L   
Sbjct: 491 YNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDL--AEELLKE 548

Query: 584 MLRKGLSPTLVTYTVLIHA 602
           M+ KG+SP   TY  LI  
Sbjct: 549 MVNKGISPDDSTYLSLIEG 567



 Score =  251 bits (642), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 137/379 (36%), Positives = 211/379 (55%)

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G+L++AR  I  M  LG K +  SYN II GYS +G +  A  + + M  +G+ P   TY
Sbjct: 187 GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 246

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
             LI G+CK GR+ +A   F +M+   ++P+ ++YNTL+ GYC  G++  AF   DE+  
Sbjct: 247 GSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK 306

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           + ++P+V TYN L+  L   G +  A  + + M  +GI+PD ITY I++NG  + GN   
Sbjct: 307 KGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKR 366

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A +  NEML KG++P    YT+ I    +     EA  L E++L +G  PD+I +N ++ 
Sbjct: 367 AFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMID 426

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           G C  G++E A  LL++M      PD +T+ +++      G +   R L + M  +G+ P
Sbjct: 427 GHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKP 486

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
             ++Y  LI  +  RG ++ AF    EM   G  P ++TYNALI  LC+ +  D A  L 
Sbjct: 487 DHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELL 546

Query: 652 IDMEEEGILPNKYTYTILI 670
            +M  +GI P+  TY  LI
Sbjct: 547 KEMVNKGISPDDSTYLSLI 565



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 134/383 (34%), Positives = 212/383 (55%)

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
           EG++++A E +  M+G G  PN V+YN +I G+S  G +E AR ++  M   G++  +++
Sbjct: 186 EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYT 245

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           Y  +I G  ++G L EA  L ++MV  G+ P   TYN LI G C  G +  A     EM+
Sbjct: 246 YGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV 305

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
           +K ++P + +YN L++     G +GEA  +  E+R + ++P  +TYN LI+G  R G+ +
Sbjct: 306 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAK 365

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            A  L   M+++GI P  +TYT ++    +   +  A + F ++L +G+ PD   +   I
Sbjct: 366 RAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMI 425

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
            G    G+   A+ L +EM  K  PPD +T+N L+ G C+ G +EEA  LL +M   G  
Sbjct: 426 DGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIK 485

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           PDHI+Y ++I      GD++    + + ML  G +PTL+TY  LI         +LA   
Sbjct: 486 PDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEEL 545

Query: 616 FSEMQVKGIRPNVITYNALINGL 638
             EM  KGI P+  TY +LI G+
Sbjct: 546 LKEMVNKGISPDDSTYLSLIEGM 568



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 163/527 (30%), Positives = 262/527 (49%), Gaps = 19/527 (3%)

Query: 45  NKDSVLNPESESYYKELIISTVEEKPWAFCNNRWVSDHFQAVVS---DPELLVRVLNRIR 101
           N +S+ + ES     Z +IS       +  +++W   HF   VS    P L+  VL  + 
Sbjct: 56  NFNSLASSESTPPITZEVISK------SVLSSQW---HFIEQVSPNLTPALISNVLYNLC 106

Query: 102 EKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGL-LRSAYWVVETVVCVNMHGILD 160
            KP++   F   +       +   +   +L  L    L L+    V+ET +  N     +
Sbjct: 107 SKPQLVSDFIHHLHPHCLDTKSYCLAVVLLARLPSPKLALQLLKQVMETRIATNRELFDE 166

Query: 161 VLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRD 220
           + +     S  S  + DLL      +  +++       M   G  P+V + N II     
Sbjct: 167 LTLSRDRLSVKSSIVFDLL------EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSS 220

Query: 221 NGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVT 280
            G    AR +   M   GI+P   TY +++   CKEG ++EA  L  +M   G  PN VT
Sbjct: 221 RGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVT 280

Query: 281 YNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV 340
           YN LI G+   G+LE+A     +M+K G+  S  +YN ++     +G + EA ++ +EM 
Sbjct: 281 YNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR 340

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
            +G+ P   TYNILI G  + G    A     EML K + P  ++Y +L+Y   R   + 
Sbjct: 341 KKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMK 400

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           EA  LF+++  + + P V+ +N +IDG C  G++E A  L + M  + + PD +T+  ++
Sbjct: 401 EADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLM 460

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
            G C+ G +  AR   +EM  +G++PD  +Y T I+G  + GD  +A+ +++EML+ GF 
Sbjct: 461 QGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFN 520

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
           P L+TYN L+  LCK    + A ELL++MV  G  PD  TY S+I  
Sbjct: 521 PTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEG 567



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 128/363 (35%), Positives = 192/363 (52%)

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           G  P + +YN +I+G    G +  AR     M  K + PD  +Y +L+ G C+ G + EA
Sbjct: 203 GFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEA 262

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
             LFD++    LVP  VTYNTLIDG C  GDLE A   ++ M+ +GI+P V TY ++V+ 
Sbjct: 263 SGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHA 322

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
               G +  A +   EM +KG+ PD   Y   I G  + G+   A+ L  EML+KG  P 
Sbjct: 323 LFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPT 382

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
            +TY  L++ L +   ++EA++L  K++  G  PD I + ++I      G++ R   L  
Sbjct: 383 HVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLK 442

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
            M RK + P  VT+  L+      G++E A M   EM+ +GI+P+ I+YN LI+G  R  
Sbjct: 443 EMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRG 502

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
            I  A+ +  +M   G  P   TY  LI   C       A  L KEM+++ I PD  T+ 
Sbjct: 503 DIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYL 562

Query: 703 ALL 705
           +L+
Sbjct: 563 SLI 565



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 159/548 (29%), Positives = 269/548 (49%), Gaps = 30/548 (5%)

Query: 12  SAHSYHYFYLKKVRFFFPFCFSVHTYPSISESNNKDSVLNPE---SESYYKELIISTVEE 68
           ++ ++H+ + +     F    S  + P I+Z     SVL+ +    E     L  + +  
Sbjct: 45  NSSTFHFSFNRN----FNSLASSESTPPITZEVISKSVLSSQWHFIEQVSPNLTPALISN 100

Query: 69  KPWAFCNN-RWVSD---HFQAVVSDPE---LLVRVLNRIREKPRIALRFFRWV-ETQPGV 120
             +  C+  + VSD   H      D +   L V +L R+   P++AL+  + V ET+   
Sbjct: 101 VLYNLCSKPQLVSDFIHHLHPHCLDTKSYCLAVVLLARL-PSPKLALQLLKQVMETRIAT 159

Query: 121 KRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDV---LIG--GGLSSCVSIKI 175
            R         E+  E  L R    V  ++V   + G L      IG   GL    ++  
Sbjct: 160 NR---------ELFDELTLSRDRLSVKSSIVFDLLEGKLKKAREFIGFMEGLGFKPNVVS 210

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
            + ++  Y+ +  +E    + + M   G+ PD      +I  +   G   +A  ++  M 
Sbjct: 211 YNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMV 270

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
           E G+ P+ VTYNT++D +C +G+++ A     EM  +G  P+  TYN+L+      G + 
Sbjct: 271 EIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMG 330

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
           +A  +I++M K G+   A +YN +I GYS  G    A +L  EM+++G+ PT  TY  LI
Sbjct: 331 EADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLI 390

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
           Y L +  R+ +A   F ++L + V PD+I +N ++ G+C +GN+  AF+L  E+  +++ 
Sbjct: 391 YVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVP 450

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P  VT+NTL+ G CR G +E A+ L + M  +GI PD I+Y  +++G  + G++  A   
Sbjct: 451 PDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXV 510

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
            +EML  G  P    Y   I    K  +   A  L +EM+ KG  PD  TY  L+ G+  
Sbjct: 511 RDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGN 570

Query: 536 LGSLEEAN 543
           + +L E N
Sbjct: 571 VDTLVEDN 578



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 35/134 (26%)

Query: 607 GRLELAFMYFSEMQVKGIRPNVITYN---------------------------------- 632
           G+L+ A  +   M+  G +PNV++YN                                  
Sbjct: 187 GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 246

Query: 633 -ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
            +LI+G+C+  R+++A GLF  M E G++PN  TY  LI+  CN G+ + A     EM+ 
Sbjct: 247 GSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK 306

Query: 692 REIEPDYCTHSALL 705
           + I P   T++ L+
Sbjct: 307 KGIMPSVSTYNLLV 320


>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 822

 Score =  265 bits (677), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 172/612 (28%), Positives = 295/612 (48%), Gaps = 30/612 (4%)

Query: 96  VLNRIREKPRIALRFFRWVETQP-GVKRDEFVFCTILEILIESGLLRSAYWVVE------ 148
           V++RI   P+  L FF W  T P     +   + ++L+++++  L      V+E      
Sbjct: 65  VIDRIHN-PQHGLYFFHWASTLPFSSPLNNVAYSSLLKLMVKYRLFSEIEIVLEDMKNRN 123

Query: 149 ---------TVVCVNM-HGILDVLIG-----GGLSSCVSIKILDLLLL-IYTKKSMVEQC 192
                    +V+CV   +G +D  +        L +C    + +  LL    K   V+  
Sbjct: 124 FKPTLEALNSVICVYAEYGFVDKAVKMFYMVCELYNCFPCVVANNSLLNCLVKNGKVDVA 183

Query: 193 LLVFNKMLRNG------LLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTY 246
             +++KML  G      L+ D  +   ++K L D G   + R++       G  P++V Y
Sbjct: 184 CELYDKMLERGGDHGLDLVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFY 243

Query: 247 NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
           N ++D +CK+G+++ A  +  E++ +G  P   TY  LI GF + G+ +    L+ +M  
Sbjct: 244 NVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNV 303

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
           +GL V+   +N II    + GL+ +A  +   M   G  P + TYNILI   C  GR+ +
Sbjct: 304 MGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKE 363

Query: 367 ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
           A         + ++P+  SY  L++ YC+ G+   A  +  ++      P +V+Y   I 
Sbjct: 364 AEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIH 423

Query: 427 GLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
           G    G+++VA  ++E M+ +G+ PD   Y ++++G CK G    A+   +EML   LQP
Sbjct: 424 GSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQP 483

Query: 487 DRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
           D + Y T + G ++  +  +A  L E +++KG  P ++ YNV++ GLCK G + +A   +
Sbjct: 484 DAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYV 543

Query: 547 RKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAAR 606
            KM      PD  T++++I   ++  DL     +F  M+++   P +V YT LI+     
Sbjct: 544 NKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKI 603

Query: 607 GRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
             +  A   F  MQ   + PNV+TY  LI G  +  + ++A   F  M     LPN  T+
Sbjct: 604 ADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTF 663

Query: 667 TILINENCNAGN 678
             LIN   N  N
Sbjct: 664 HYLINGLTNITN 675



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 146/468 (31%), Positives = 236/468 (50%), Gaps = 15/468 (3%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K  +V+Q L   N+M   GL  +VK  N II      G   KA E+ RMM E G +P I 
Sbjct: 290 KFQVVDQLL---NEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDIT 346

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TYN +++  C  G ++EA E L   + R   PN  +Y  L+  + + G+   A  ++  +
Sbjct: 347 TYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKI 406

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
            + G K    SY   I G    G +  AL + E+M+ +GV P    YN+L+ GLCK GR 
Sbjct: 407 AETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRF 466

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
             A+    EML  N+ PD   Y TL+ G+ R+  + +A  LF+ + S+ + P VV YN +
Sbjct: 467 PAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVM 526

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           I GLC+ G +  A      M      PD  T++ +++G  K  +L  A + F +M+++  
Sbjct: 527 IKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKY 586

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
           +P+  AYT+ I G  K+ D S A ++   M +    P+++TY +L+ G  K G  E+A  
Sbjct: 587 KPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAAS 646

Query: 545 LLRKMVGDGFIPDHITY-------TSIIHASL-----EMGDLRRGRDLFNNMLRKGLSPT 592
               M+ +  +P+  T+       T+I + +L     E  D     D F  M+ +G S  
Sbjct: 647 FFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIEKNEENDRSLILDFFATMISEGWSQV 706

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
           + TY  +I      G ++ A +  ++M  KG   + + ++AL++GLC+
Sbjct: 707 IATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSVCFSALLHGLCQ 754



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 210/417 (50%), Gaps = 12/417 (2%)

Query: 204 LLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEAL 263
           LLP+  +   ++      G  V A ++   + E G KP +V+Y   +      GE+  AL
Sbjct: 376 LLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVAL 435

Query: 264 ELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGY 323
            +  +M  +G  P+   YNVL++G  + G    A+ L+ +ML L L+  A+ Y  ++ G+
Sbjct: 436 MVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGF 495

Query: 324 SEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
                L +A  L E ++++G+ P +  YN++I GLCK G+++DA     +M   N  PD 
Sbjct: 496 IRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDE 555

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
            +++T++ GY +  ++  A  +F ++  +   P VV Y +LI+G C+  D+  A+++   
Sbjct: 556 YTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRA 615

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           M +  + P+V+TYTI++ G  K G    A  FF  ML     P+   +   I G   + +
Sbjct: 616 MQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNITN 675

Query: 504 TSEAYRLQEE------------MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
           T+      EE            M+++G+   + TYN ++  LCK G ++ A  L  KM+ 
Sbjct: 676 TTLLIEKNEENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLR 735

Query: 552 DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
            GF+ D + +++++H   + G  +  R++ +  L K    T   Y++ +  +   G+
Sbjct: 736 KGFLMDSVCFSALLHGLCQTGKSKEWRNIISGDLTKIDFQTAFEYSLKLDKYLYDGK 792



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 87/366 (23%), Positives = 159/366 (43%), Gaps = 47/366 (12%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           ++  L+V  KM+  G+ PD +  N ++  L   G    A+ +   M +  ++P    Y T
Sbjct: 431 IDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYAT 490

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++D F +  E+ +A EL   +  +G  P  V YNV+I G  + G++  A   +  M    
Sbjct: 491 LVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIAN 550

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
                ++++ +I GY ++  L  AL +  +M+ +   P +  Y  LI G CK   +S A 
Sbjct: 551 HAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAE 610

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP------------ 416
             F  M   N+ P++++Y  L+ G+ ++G   +A   F+ +   N +P            
Sbjct: 611 KVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGL 670

Query: 417 -----------------------------------TVVTYNTLIDGLCRYGDLEVAQQLK 441
                                               + TYN++I  LC++G ++ AQ L+
Sbjct: 671 TNITNTTLLIEKNEENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQ 730

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
             M+ +G L D + ++ +++G C+ G     R   +  L K      F Y+ ++   L  
Sbjct: 731 TKMLRKGFLMDSVCFSALLHGLCQTGKSKEWRNIISGDLTKIDFQTAFEYSLKLDKYLYD 790

Query: 502 GDTSEA 507
           G  SEA
Sbjct: 791 GKPSEA 796


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  265 bits (677), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 136/422 (32%), Positives = 238/422 (56%), Gaps = 5/422 (1%)

Query: 265 LLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYS 324
           +L  ++    +PN   + VLI  FS  G +E+A  +     K+ +  +  + N ++ G  
Sbjct: 115 VLSRLESSKFTPN--VFGVLIIAFSEMGLVEEALWV---YYKMDVLPAMQACNMVLDGLV 169

Query: 325 EKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDII 384
           +KG       +  +MV RG +P + TY  LI G C+ G    A   F EM+ K + P ++
Sbjct: 170 KKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVV 229

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
            Y  L+ G C    I EA  +F  +R+  ++P + TYNT++DG C+   ++ A +L + M
Sbjct: 230 IYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEM 289

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
           +  G+LP+V+T+ I+++G CK   +  AR+F  +M   G+ P+ F Y   I G  K G+ 
Sbjct: 290 LGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNL 349

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
           SEA  L  E+      PD+ TY++L+ GLC +  +EEA+ LL++M   GF+P+ +TY ++
Sbjct: 350 SEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTL 409

Query: 565 IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
           I    + G++ +  ++ + M  KG+ P ++T++ LI  +   G++E A   ++EM +KG+
Sbjct: 410 IDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL 469

Query: 625 RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
            P+V+ Y ALI+G  +     +A+ L  +M+E G+ PN +T + LI+  C  G   +A++
Sbjct: 470 LPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIK 529

Query: 685 LY 686
           L+
Sbjct: 530 LF 531



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 136/407 (33%), Positives = 226/407 (55%), Gaps = 3/407 (0%)

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           +  ++ +F + G ++EAL + ++M      P     N+++ G  + G  +    +  DM+
Sbjct: 129 FGVLIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGLVKKGRFDTMWKVYGDMV 185

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
             G   +  +Y  +I G   +G  ++A  L +EM+ + + PT+  Y ILI GLC   R+S
Sbjct: 186 ARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRIS 245

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
           +A   F  M    ++P++ +YNT++ GYC+  ++ +A  L+ E+    L+P VVT+  LI
Sbjct: 246 EAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILI 305

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           DGLC+  ++  A++   +M + G++P++  Y  +++G CK GNLS A    +E+ +  + 
Sbjct: 306 DGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEIL 365

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           PD F Y+  I G   +    EA  L +EM  KGF P+ +TYN L+ G CK G++E+A E+
Sbjct: 366 PDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEV 425

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
             +M   G  P+ IT++++I    + G +     L+  M+ KGL P +V YT LI  H  
Sbjct: 426 CSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFK 485

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
            G  + AF    EMQ  G+ PNV T + LI+GLC+  RI  A  LF+
Sbjct: 486 DGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFL 532



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 149/467 (31%), Positives = 240/467 (51%), Gaps = 25/467 (5%)

Query: 261 EALELLWEMQGRG-CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL------------ 307
           +ALEL   +  R   + N   Y+ +I   +      +AR L+RD+++             
Sbjct: 52  QALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCS 111

Query: 308 ---------GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
                      K + + +  +I  +SE GL+ EAL +  +M    V P +   N+++ GL
Sbjct: 112 VFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGL 168

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
            K GR       + +M+ +   P++++Y TL+ G CR G+  +AF LFDE+  + + PTV
Sbjct: 169 VKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTV 228

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           V Y  LI GLC    +  A+ +   M N G+LP++ TY  M++G CK+ ++  A E + E
Sbjct: 229 VIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQE 288

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           ML  GL P+   +   I G  K  +   A +   +M + G  P++  YN L+ G CK G+
Sbjct: 289 MLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGN 348

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           L EA  L  ++     +PD  TY+ +I     +  +     L   M +KG  P  VTY  
Sbjct: 349 LSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT 408

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           LI  +   G +E A    S+M  KGI PN+IT++ LI+G C+  +++ A GL+ +M  +G
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG 468

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +LP+   YT LI+ +   GN +EA RL+KEM +  + P+  T S L+
Sbjct: 469 LLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLI 515



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 147/491 (29%), Positives = 245/491 (49%), Gaps = 53/491 (10%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVV-----------CVNM 155
           AL  F  V  +  + ++  ++  I+ +L  + L   A  ++  ++           C ++
Sbjct: 53  ALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCSV 112

Query: 156 HGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRII 215
             +L  L     SS  +  +  +L++ +++  +VE+ L V+ KM    +LP ++ CN ++
Sbjct: 113 FNVLSRL----ESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVL 165

Query: 216 KVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCS 275
             L   G      +VY  M   G  P++VTY T++D  C++G+  +A  L  EM  +   
Sbjct: 166 DGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIF 225

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           P  V Y +LI G      + +A  + R M   G+  + ++YN ++ GY +   + +AL L
Sbjct: 226 PTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALEL 285

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
            +EM+  G+ P + T+ ILI GLCK   +  AR    +M    V+P+I  YN L+ GYC+
Sbjct: 286 YQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCK 345

Query: 396 SGNIGEAFL-----------------------------------LFDELRSRNLVPTVVT 420
           +GN+ EA                                     L  E++ +  +P  VT
Sbjct: 346 AGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVT 405

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YNTLIDG C+ G++E A ++   M  +GI P++IT++ +++G CK G +  A   + EM+
Sbjct: 406 YNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMV 465

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            KGL PD  AYT  I G  K G+T EA+RL +EM   G  P++ T + L+ GLCK G + 
Sbjct: 466 IKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRIS 525

Query: 541 EANELLRKMVG 551
           +A +L     G
Sbjct: 526 DAIKLFLAKTG 536



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 142/464 (30%), Positives = 226/464 (48%), Gaps = 11/464 (2%)

Query: 157 GILDVLIGGGLSSCVSIKILDLL-LLIYTKKSMVEQCLLVFNKMLR---NGLLPDVKNCN 212
            I+ VL G  L +     + DL+  L  +++S +  C  VFN + R   +   P+V    
Sbjct: 75  AIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRI--CCSVFNVLSRLESSKFTPNVFGV- 131

Query: 213 RIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR 272
            +I    + G   +A  VY  M    + P++   N +LD   K+G      ++  +M  R
Sbjct: 132 -LIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVAR 187

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA 332
           G SPN VTY  LI G  R G+  +A  L  +M++  +  +   Y  +I G   +  + EA
Sbjct: 188 GASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEA 247

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
            ++   M   G+ P L TYN ++ G CK   V  A   + EML   ++P+++++  L+ G
Sbjct: 248 ESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDG 307

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
            C++  +  A     ++ S  +VP +  YN LIDG C+ G+L  A  L   +    ILPD
Sbjct: 308 LCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPD 367

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
           V TY+I++ G C +  +  A     EM +KG  P+   Y T I G  K G+  +A  +  
Sbjct: 368 VFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCS 427

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           +M  KG  P++IT++ L+ G CK G +E A  L  +MV  G +PD + YT++I    + G
Sbjct: 428 QMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDG 487

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
           + +    L   M   GL P + T + LI      GR+  A   F
Sbjct: 488 NTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 126/522 (24%), Positives = 232/522 (44%), Gaps = 42/522 (8%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +  +M + G LP+    N +I      G   KA EV   M E GI+P+I+T++T++D +C
Sbjct: 390 LLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYC 449

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K G+M+ A+ L  EM  +G  P+ V Y  LI G  ++G  ++A  L ++M + GL  +  
Sbjct: 450 KAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVF 509

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL---IYGLCKWGRVSDARH-- 369
           + + +I G  + G + +A+ L   +   G   T +  N L   +Y +C    +S  R   
Sbjct: 510 TLSCLIDGLCKDGRISDAIKLF--LAKTGTDTTGSKTNELDRSLYQMCSLA-LSLFRGIS 566

Query: 370 -------RFFEMLRKNVIPDIISY--------NTLLYGYCRSGNIGEAFLLFDELRSRNL 414
                  R  ++   N  P    +        N  L  Y +S N  +  L F  L  +N 
Sbjct: 567 EPCICVIRVTKLFATNNQPKAHLHTHLKPPKSNQTLKRYLQSSNTSKVLLFFRILLRKN- 625

Query: 415 VPTVVTYNTLIDGL--CRY-GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
            P+ +   +L+  L  C     L   +Q+   +IN G  P +   T +++     GN++ 
Sbjct: 626 -PSSIDSFSLMFALKACTLKSSLVEGKQMHALVINFGFEPIIFLQTSLISMYSATGNVAD 684

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A   F+E+  K L     ++T+ I+  +     ++A +L  +M      PD++T  V + 
Sbjct: 685 AHNMFDEIPSKNL----ISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALS 740

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
               LG+L+    +   +   G   D     S+I+   + G++   R  F+ +L     P
Sbjct: 741 ACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARR-FSLVL-----P 794

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVK-GIRPNVITYNALINGLCRLRRIDQAYGL 650
             VT+  ++ A +  G +E    +F  M+    +RP +  +  +++ LCR   + +AY  
Sbjct: 795 NDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEF 854

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
            + M    + PN   +  L+      G W + + +  ++  R
Sbjct: 855 ILKMP---VRPNAVVWRTLLGACSLQGMWDKKMLVRNQIKQR 893


>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 808

 Score =  265 bits (677), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 169/628 (26%), Positives = 295/628 (46%), Gaps = 56/628 (8%)

Query: 84  QAVVSDPELLVRVLNRIREKPRIALRFFRWVETQP-GVKRDEFVFCTILEILI------- 135
           + VVSD    V  ++R+ +   +AL+FF W  T+P     D     ++L++L        
Sbjct: 53  KVVVSDVAHFV--IDRVHD-AELALKFFDWASTRPFSCSLDGVAHSSLLKLLASFRVFPE 109

Query: 136 ----------------------------ESGLLRSAYWVVETVVCVNMHGILDVLIGGGL 167
                                       ESG L  A  +  TV    MH  L  ++    
Sbjct: 110 IELVLENMKAQHLKPTREAFSALILAYGESGSLDRALQLFHTVR--EMHNCLPTVVAS-- 165

Query: 168 SSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRN----GLLPDVKNCNRIIKVLRDNGF 223
                    + LL    K   V+  L +++KML+     G + D    + ++K L + G 
Sbjct: 166 ---------NSLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGK 216

Query: 224 SVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNV 283
             + R + +     G  P +V YN ++D +CK+G++Q A   L E++ +G  P   TY  
Sbjct: 217 IEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGA 276

Query: 284 LITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG 343
           LI GF + GE E    L+ +M   GL ++   +N +I    + GL+ +A      M   G
Sbjct: 277 LINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMG 336

Query: 344 VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF 403
             P + TYN +I   CK GR+ +A     +   + ++P+  SY  L++ YC+ G+  +A 
Sbjct: 337 CGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAA 396

Query: 404 LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
            +   +      P +V+Y   I G+  +G+++VA  ++E M+ +G+ PD   Y ++++G 
Sbjct: 397 GMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGL 456

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
           CK G     +   +EML + +QPD + + T + G ++ G+  EA ++ + ++ KG  P +
Sbjct: 457 CKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGI 516

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
           + YN ++ G CK G + +A   L KM      PD  TY+++I   ++  D+     +F  
Sbjct: 517 VGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQ 576

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           M++    P ++TYT LI+    +  +  A   F  M+   + PNV+TY  L+ G  +  +
Sbjct: 577 MMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGK 636

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILIN 671
            ++A  +F  M   G  PN  T+  LIN
Sbjct: 637 PEKATSIFELMLMNGCPPNDATFHYLIN 664



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 145/514 (28%), Positives = 227/514 (44%), Gaps = 84/514 (16%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K    E    +  +M   GL  +VK  N +I      G   KA E  R M E G  P 
Sbjct: 281 FCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPD 340

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           I TYNTM++  CK G ++EA E L + + RG  PN  +Y  L+  + + G+  +A G++ 
Sbjct: 341 ITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLF 400

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            + ++G K    SY   I G    G +  AL + E+M+ +GV P    YN+L+ GLCK G
Sbjct: 401 RIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNG 460

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R    +    EML +NV PD+  + TL+ G+ R+G + EA  +F  +  + + P +V YN
Sbjct: 461 RFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYN 520

Query: 423 TLIDGLCRYG-----------------------------------DLEVAQQLKENMINQ 447
            +I G C++G                                   D+  A ++   M+  
Sbjct: 521 AMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKH 580

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
              P+VITYT ++NG CK  ++  A + F  M    L P+   YTT + G  K G   +A
Sbjct: 581 KFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKA 640

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGL---------------------------------- 533
             + E ML  G PP+  T++ L++GL                                  
Sbjct: 641 TSIFELMLMNGCPPNDATFHYLINGLTNTATSPVLIEEKDSMENERSLILDFFTMMLSEG 700

Query: 534 ---------------CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
                          CK G ++ A  LL KM+  GF+ D + +T+++H     G  +  R
Sbjct: 701 WDQVIAAYNSVIVCLCKHGMVDTAQLLLTKMLTKGFLIDSVCFTAMLHGLCHKGKSKEWR 760

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
           ++ +  L K    T V Y++ +  +  +GRL  A
Sbjct: 761 NIISCDLNKIELQTAVKYSLTLDKYLYQGRLSEA 794



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/328 (24%), Positives = 142/328 (43%), Gaps = 41/328 (12%)

Query: 120 VKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMH-GIL--DVLIGGGLSSCVSIKIL 176
           V+ D +VF T+++  I +G L  A  + + ++   +  GI+  + +I G    C   K+ 
Sbjct: 477 VQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKG---FCKFGKMT 533

Query: 177 DLLLLI---------------------YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRII 215
           D L  +                     Y K+  +   L +F +M+++   P+V     +I
Sbjct: 534 DALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLI 593

Query: 216 KVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCS 275
                    ++A +V+R M  F + P++VTY T++  F K G+ ++A  +   M   GC 
Sbjct: 594 NGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCP 653

Query: 276 PNGVTYNVLITGFSRNG----------ELEQARGLIRD----MLKLGLKVSAHSYNPIIC 321
           PN  T++ LI G +              +E  R LI D    ML  G      +YN +I 
Sbjct: 654 PNDATFHYLINGLTNTATSPVLIEEKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIV 713

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
              + G++  A  L  +M+T+G       +  +++GLC  G+  + R+     L K  + 
Sbjct: 714 CLCKHGMVDTAQLLLTKMLTKGFLIDSVCFTAMLHGLCHKGKSKEWRNIISCDLNKIELQ 773

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDEL 409
             + Y+  L  Y   G + EA ++   L
Sbjct: 774 TAVKYSLTLDKYLYQGRLSEASVILQTL 801


>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
          Length = 1095

 Score =  265 bits (676), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 167/591 (28%), Positives = 278/591 (47%), Gaps = 87/591 (14%)

Query: 195  VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
            +   ML +G+ PDV   + +I  +   G   + +E+   M + G+ P+ V Y T++  FC
Sbjct: 461  ILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFC 520

Query: 255  KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
            K G  +EAL+   ++   G   N V +N L+  F R G + +A    + M ++ +     
Sbjct: 521  KAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVA 580

Query: 315  SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
            S+N II  Y ++G ++EA ++ + MV  G  P + TY  L+ GLC+ G +  A+     +
Sbjct: 581  SFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYL 640

Query: 375  LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
            L K    D  + NTLL G C+ G + EA  L +++ +RN++P   TY  L+DG C+ G +
Sbjct: 641  LEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKV 700

Query: 435  EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML-RKGLQPDRFAYTT 493
              A  L + M+ +G++PD I YT ++NG    G +  A   F E++ ++GL  D  AY +
Sbjct: 701  VPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNS 760

Query: 494  QIAGELKLGDTSEAYRLQE-----------------------------------EMLAKG 518
             + G LK G  +E  RL                                     +M+ +G
Sbjct: 761  MMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEG 820

Query: 519  FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY----------------- 561
              PD +TY +L+ GLC+ G +E A + L KMV +G  PD++ +                 
Sbjct: 821  IKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNAL 880

Query: 562  ----------------------------------TSIIHASLEMGDLRRGRDLFNNMLRK 587
                                              +SI+    + G +     +F++++R 
Sbjct: 881  QLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRA 940

Query: 588  GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
            G+ PT+ T+T L+H      +++ AF     M+  G++ +V+TYN LI GLC  + I  A
Sbjct: 941  GMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDA 1000

Query: 648  YGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
              L+ +M+ +G+LPN  TY  L       G  Q+  +L K++ DR I P Y
Sbjct: 1001 LDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPSY 1051



 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 187/656 (28%), Positives = 315/656 (48%), Gaps = 42/656 (6%)

Query: 105 RIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMH--GILDVL 162
           ++ALR    +  Q G+ R   ++C  + IL+++ +   A  V+  +         I   L
Sbjct: 89  KLALRMLDSIVQQSGLDRITHIYCMAVHILVQAQMPSQAMSVLRHLALTGFSCSAIFSSL 148

Query: 163 IGGGLSSCVSIKI--LDLLLLIYTKKSMV----------EQC---------------LLV 195
           +   +S C    +  +DLL+  Y K+  V          ++C               L+ 
Sbjct: 149 LRT-ISRCDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVG 207

Query: 196 FNK------MLRNGL---LP-DVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVT 245
            NK       L+  L    P DV  CN ++  L   G   KA  + + M    + P+ VT
Sbjct: 208 INKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVT 266

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           YNT+L+ + K+G  + AL +L +M+  G   +  TYN++I    +     +A  L++ M 
Sbjct: 267 YNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMR 326

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
           ++ L     SYN +I G+  +G +  A+ +  +M+ + + P++ATY  LI G C+ GR  
Sbjct: 327 EVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTD 386

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
           +AR   +EM    V P  ++Y+ LL GYC+   +G A  L   LRSR++      Y  LI
Sbjct: 387 EARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILI 446

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           DG C+ G++  A+Q+ + M+  GI PDVITY+ ++NG CKMG +   +E  + M + G+ 
Sbjct: 447 DGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVL 506

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           P+   YTT +    K G   EA +   ++   G   + + +N L+    + G + EA + 
Sbjct: 507 PNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQF 566

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
            + M       D  ++  II +  + G++     +++NM+R G  P + TY  L+     
Sbjct: 567 KQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQ 626

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
            G L  A  +   +  K    +  T N L+ G+C+   +D+A  L   M    ILP+ YT
Sbjct: 627 GGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYT 686

Query: 666 YTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYL 721
           YTIL++  C  G    AL L + ML++ + PD   ++  LL  L  + +V A  Y+
Sbjct: 687 YTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTC-LLNGLVNEGQVKAASYM 741



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 163/583 (27%), Positives = 290/583 (49%), Gaps = 3/583 (0%)

Query: 145 WVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGL 204
           W V+   C +   ILD +   G+ +   +   ++++    K     +  L+  +M    L
Sbjct: 273 WYVKKGRCKSALRILDDMEKNGIEA--DLYTYNIMIDKLCKLKRSARAYLLLKRMREVNL 330

Query: 205 LPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALE 264
            PD  + N +I      G    A  ++  M    +KPS+ TY  ++D +C+ G   EA  
Sbjct: 331 TPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARR 390

Query: 265 LLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYS 324
           +L+EMQ  G  P+ +TY+ L+ G+ ++ +L  A  LI+ +    + ++   Y  +I G+ 
Sbjct: 391 VLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFC 450

Query: 325 EKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDII 384
           + G + +A  + + M+  G+ P + TY+ LI G+CK G + + +     M +  V+P+ +
Sbjct: 451 QLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNV 510

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
            Y TL++ +C++G+  EA   F ++    LV   V +N L+    R G +  A+Q K+ M
Sbjct: 511 LYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYM 570

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
               I  DV ++  +++  C+ GN+  A   ++ M+R G  PD   Y + + G  + G  
Sbjct: 571 SRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHL 630

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
            +A      +L K    D  T N L+ G+CK G+L+EA +L  KMV    +PD  TYT +
Sbjct: 631 VQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTIL 690

Query: 565 IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK-G 623
           +    + G +     L   ML KGL P  + YT L++     G+++ A   F E+  K G
Sbjct: 691 LDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEG 750

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
           +  + I YN+++NG  +  +I++   L  +M E  + P+  +Y IL++     G     L
Sbjct: 751 LYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTL 810

Query: 684 RLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
            LY++M+   I+PD  T+  L+    +      AV++LE + L
Sbjct: 811 YLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVL 853



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 146/504 (28%), Positives = 257/504 (50%), Gaps = 1/504 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +FN+MLR  L P V     +I     NG + +AR V   M   G++PS +TY+ +L+ +C
Sbjct: 356 IFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYC 415

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K  ++  AL+L+  ++ R  S N   Y +LI GF + GE+ +A+ +++ ML  G+     
Sbjct: 416 KHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVI 475

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +Y+ +I G  + G++ E   +   M   GV P    Y  L++  CK G   +A   F ++
Sbjct: 476 TYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDI 535

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
            R  ++ + + +N LL  + R G I EA      +    +   V ++N +ID  C+ G++
Sbjct: 536 YRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNV 595

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
             A  + +NM+  G  PD+ TY  ++ G C+ G+L  A+EF   +L K    D     T 
Sbjct: 596 LEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTL 655

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           + G  K G   EA  L E+M+ +   PD  TY +L+ G CK G +  A  LL+ M+  G 
Sbjct: 656 LVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGL 715

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNML-RKGLSPTLVTYTVLIHAHAARGRLELAF 613
           +PD I YT +++  +  G ++    +F  ++ ++GL    + Y  +++ +   G++    
Sbjct: 716 VPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIE 775

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
                M    + P+  +YN L++G  +  ++ +   L+ DM +EGI P+  TY +LI   
Sbjct: 776 RLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGL 835

Query: 674 CNAGNWQEALRLYKEMLDREIEPD 697
           C  G  + A++  ++M+   + PD
Sbjct: 836 CEYGLIEIAVKFLEKMVLEGVFPD 859



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 83/373 (22%), Positives = 170/373 (45%), Gaps = 73/373 (19%)

Query: 117  QPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVC--------VNMHGILDVLIGGGLS 168
            + G+  D   +  +L  L+  G +++A ++ + ++C        +  + +++  + GG  
Sbjct: 712  EKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQI 771

Query: 169  SCV--------------SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRI 214
            + +              S    ++L+  Y KK  + + L ++  M++ G           
Sbjct: 772  NEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEG----------- 820

Query: 215  IKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGC 274
                                    IKP  VTY  ++   C+ G ++ A++ L +M   G 
Sbjct: 821  ------------------------IKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGV 856

Query: 275  SPNGVTYNVLITGFSRN----------------GELEQARGLIRDMLKLGLKVSAHSYNP 318
             P+ + +++LI  FS                  G+++ A  L  DM  LG+  S  + + 
Sbjct: 857  FPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESS 916

Query: 319  IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
            I+ G  + G + EA+ +   ++  G+ PT+AT+  L++GLCK  ++ DA H    M    
Sbjct: 917  IVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCG 976

Query: 379  VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
            +  D+++YN L+ G C    I +A  L++E++S+ L+P + TY TL   +   G ++  +
Sbjct: 977  LKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGE 1036

Query: 439  QLKENMINQGILP 451
            +L +++ ++GI+P
Sbjct: 1037 KLLKDIEDRGIVP 1049


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  265 bits (676), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 162/534 (30%), Positives = 265/534 (49%), Gaps = 8/534 (1%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F K+L+ G   D    N ++K L  NG  +KA E +  +   G   + V+Y  +++  C
Sbjct: 94  IFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLC 153

Query: 255 KEGEMQEALELL--------WEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
           + G + EA+ LL         E  G     N V Y+++I    RNG +++      +M+ 
Sbjct: 154 ENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMG 213

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
            G+  +  +Y  +I G    G  +E   L +EM+ RG+  ++  + +LI GLCK G + +
Sbjct: 214 NGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVE 273

Query: 367 ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
           AR  F EM+ +   P+I++   L+ GYC  GN+  A  LFD +        V TYN  I 
Sbjct: 274 AREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIH 333

Query: 427 GLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
           G C+ G +  A ++ + M  +G++P+++TY  +++  CK G +S A E    M R GL P
Sbjct: 334 GYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTP 393

Query: 487 DRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
           D       + G  K     +A  L  +++  G  PD+ +Y +L+HG C    + EA  LL
Sbjct: 394 DIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLL 453

Query: 547 RKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAAR 606
           R M     +P  +TY+ +I      G +     L N M  KG  P  +TY++L+ A   +
Sbjct: 454 RDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKK 513

Query: 607 GRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
             L+ A   F++M  +G+ P+V+ Y  +I+G C+  RID+A  LF +M  + ++P+  TY
Sbjct: 514 QHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTY 573

Query: 667 TILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
           TIL N    +G+     +    + D    P    + A L K    DYK  A E+
Sbjct: 574 TILFNAVFKSGSNSYEWKFVNVIRDINPPPRVLKYLAALCKSEHLDYKCLASEF 627



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 153/526 (29%), Positives = 260/526 (49%), Gaps = 44/526 (8%)

Query: 224 SVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQ-GRGCSPNGVTYN 282
           + K   + R +  F    S+  +N  L    K  +   A+ L  + +     +P  +T  
Sbjct: 17  AAKTSSLPRFINSFHSHSSLAHFNKHLTCLMKTNQHSTAIALFNQNEYNNFITPCIITLT 76

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
           ++IT F   G +  +  +   +LK G  +   + N ++ G    G +++AL   +E+V  
Sbjct: 77  IIITCFFHLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNN 136

Query: 343 GVAPTLATYNILIYGLCKWGRVSDA----------------------------------- 367
           G +    +Y ILI GLC+ GRV++A                                   
Sbjct: 137 GFSLNEVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLC 196

Query: 368 RHRFF--------EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
           R+ F         EM+   V P+  +Y +L+ G C  G   E F L DE+  R L  +V 
Sbjct: 197 RNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVY 256

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
            +  LIDGLC+ G L  A+++ + M+N+G  P+++T T ++ G C  GN+ MARE F+ +
Sbjct: 257 VFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAI 316

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
              G + D + Y   I G  K+G   +A R+ +EM  +G  P+++TYN L+  LCK G +
Sbjct: 317 GEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEV 376

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
             A E+++ M   G  PD +T   ++    +   L +   LFN ++  GL+P + +YT+L
Sbjct: 377 SGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTIL 436

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           IH      R+  A     +M +K + P+++TY+ LI+GLCR  RI  A+ L  +M  +G 
Sbjct: 437 IHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGP 496

Query: 660 LPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           LP+  TY+IL++      +  EA+ L+ +M+ R +EPD   ++ ++
Sbjct: 497 LPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMI 542



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 126/422 (29%), Positives = 212/422 (50%), Gaps = 17/422 (4%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           GV  +EF + +++  L   G     +            G++D +I  GL   VS+ +  +
Sbjct: 215 GVCPNEFTYGSLIRGLCGVGKFLEGF------------GLVDEMIRRGLD--VSVYVFTV 260

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+    K  M+ +   +F++M+  G  P++  C  ++      G    ARE++  +GE+G
Sbjct: 261 LIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWG 320

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
            K  + TYN  +  +CK G +++A+ +  EM   G  PN VTYN LI    + GE+  A 
Sbjct: 321 FKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAW 380

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            +++ M + GL     +   ++ G  +   L +A+ L  ++V  G+ P + +Y ILI+G 
Sbjct: 381 EIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGC 440

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C   R+ +A +   +M  KN++P I++Y+ L+ G CRSG I  A+ L +E+  +  +P  
Sbjct: 441 CTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDT 500

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           +TY+ L+D L +   L+ A  L   MI +G+ PDV+ YTIM++G CK   +  A   F E
Sbjct: 501 ITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFRE 560

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M  K L PD   YT       K G  S  ++    +     PP ++ Y   +  LCK   
Sbjct: 561 MHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIRDINPPPRVLKY---LAALCKSEH 617

Query: 539 LE 540
           L+
Sbjct: 618 LD 619


>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 874

 Score =  265 bits (676), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 165/553 (29%), Positives = 280/553 (50%), Gaps = 29/553 (5%)

Query: 173 IKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR 232
           I + ++LL    ++  VE    ++  M+  G+ P+    N +I+ L D+     ARE++ 
Sbjct: 112 IYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARELFD 171

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
            M E G KP+  T+  ++  +CK G   + LELL  M+  G  PN V YN +++ F R G
Sbjct: 172 EMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREG 231

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR---GVA-PTL 348
             + +  L+  M + GL     ++N  I    ++G +++A  +  +M      G+  P  
Sbjct: 232 RNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNS 291

Query: 349 ATYNILIYGLCKWGRVSDARHRFFEMLRKNV-IPDIISYNTLLYGYCRSGNIGEAFLLFD 407
            TYN+++ G CK G + DA+   FE +R+N  +  + SYN  L G  R G   EA  +  
Sbjct: 292 ITYNLMLKGFCKVGLLEDAK-TLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLK 350

Query: 408 ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG 467
           ++  + + P++ +YN L+DGLC+ G L  A+ +   M   G+ PD +TY  +++G C +G
Sbjct: 351 QMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVG 410

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
            +  A+    EM+R    P+ +     +     +G  SEA  L  +M  KG+  D +T N
Sbjct: 411 KVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCN 470

Query: 528 VLVHGLCKLGSLEEANELLRKM----------VGDGFI-------------PDHITYTSI 564
           ++V GLC  G L++A E+++ M          +G+ +I             PD ITY+++
Sbjct: 471 IIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTL 530

Query: 565 IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
           ++   + G     + LF  M+ + L P  + Y + IH    +G++  AF    +M+ KG 
Sbjct: 531 LNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGC 590

Query: 625 RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
             ++ TYN+LI GL    +I + +GL  +M E+GI PN  TY   I   C  G  ++A  
Sbjct: 591 HKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATN 650

Query: 685 LYKEMLDREIEPD 697
           L  EM+ + I P+
Sbjct: 651 LLDEMMQKNIAPN 663



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 170/567 (29%), Positives = 265/567 (46%), Gaps = 38/567 (6%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +L+  Y K  + ++ L + N M   G+LP+    N I+      G +  + ++   M E 
Sbjct: 187 ILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREE 246

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG----CSPNGVTYNVLITGFSRNGE 293
           G+ P IVT+N+ + + CKEG++ +A  +  +M+         PN +TYN+++ GF + G 
Sbjct: 247 GLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGL 306

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           LE A+ L   + +    VS  SYN  + G    G  +EA  + ++M+ +G+ P++ +YNI
Sbjct: 307 LEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNI 366

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           L+ GLCK G +SDA+     M R  V PD ++Y  LL+GYC  G +  A  L  E+   N
Sbjct: 367 LMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN 426

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
            +P   T N L+  L   G +  A++L   M  +G   D +T  I+V+G C  G L  A 
Sbjct: 427 CLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAI 486

Query: 474 EFFNEMLRKGLQ-----------------------PDRFAYTTQIAGELKLGDTSEAYRL 510
           E    M   G                         PD   Y+T + G  K G  +EA  L
Sbjct: 487 EIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTL 546

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
             EM+ +   PD + YN+ +H  CK G +  A  +L+ M   G      TY S+I     
Sbjct: 547 FAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGI 606

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
              +     L + M  KG+SP + TY   I      G++E A     EM  K I PNV +
Sbjct: 607 KNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFS 666

Query: 631 YNALINGLCRLRRIDQAYGLF-----IDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           +  LI   C++   D A  +F     I  ++EG+      Y+++ NE   AG   +A  L
Sbjct: 667 FKYLIGAFCKVPDFDMAQEVFETAVSICGQKEGL------YSLMFNELLAAGQLLKATEL 720

Query: 686 YKEMLDREIEPDYCTHSALLLKQLDKD 712
            + +LDR  E     +  L++    KD
Sbjct: 721 LEAVLDRGFELGTFLYKDLVVSLCKKD 747



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 121/450 (26%), Positives = 195/450 (43%), Gaps = 59/450 (13%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V  +M+  G+ P + + N ++  L   G    A+ +  +M   G+ P  VTY  +L  +C
Sbjct: 348 VLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYC 407

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
             G++  A  LL EM    C PN  T N+L+      G + +A  L+R M + G  +   
Sbjct: 408 SVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTV 467

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVA-----------------------PTLATY 351
           + N I+ G    G L +A+ + + M   G A                       P L TY
Sbjct: 468 TCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITY 527

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL------- 404
           + L+ GLCK GR ++A+  F EM+ + + PD ++YN  ++ +C+ G I  AF        
Sbjct: 528 STLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEK 587

Query: 405 ----------------------------LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
                                       L DE+R + + P + TYNT I  LC  G +E 
Sbjct: 588 KGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVED 647

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
           A  L + M+ + I P+V ++  ++   CK+ +  MA+E F   +    Q +   Y+    
Sbjct: 648 ATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSICGQKEGL-YSLMFN 706

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
             L  G   +A  L E +L +GF      Y  LV  LCK   LE A+ +L KM+  G+  
Sbjct: 707 ELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHKMIDKGYGF 766

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           D      +I    +MG+ +   +    M+ 
Sbjct: 767 DPAALMPVIDGLGKMGNKKEANNFAEKMME 796



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 159/329 (48%), Gaps = 4/329 (1%)

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           P I  YN LL    R   +     L+ ++    + P   T+N LI  LC    ++ A++L
Sbjct: 110 PGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAAREL 169

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
            + M  +G  P+  T+ I+V G CK G      E  N M   G+ P++  Y T ++   +
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCR 229

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI----P 556
            G   ++ +L E+M  +G  PD++T+N  +  LCK G + +A+ +   M  D ++    P
Sbjct: 230 EGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
           + ITY  ++    ++G L   + LF ++       +L +Y + +      G+   A    
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVL 349

Query: 617 SEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNA 676
            +M  KGI P++ +YN L++GLC+L  +  A  +   M+  G+ P+  TY  L++  C+ 
Sbjct: 350 KQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSV 409

Query: 677 GNWQEALRLYKEMLDREIEPDYCTHSALL 705
           G    A  L +EM+     P+  T + LL
Sbjct: 410 GKVDAAKSLLQEMMRNNCLPNAYTCNILL 438



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 90/319 (28%), Positives = 157/319 (49%), Gaps = 6/319 (1%)

Query: 393 YCRSGNIGEAFLLFDELRSR--NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
           + +S +I +AF  F  +RSR     P +  YN L++   R   +E    L ++M+  GI 
Sbjct: 85  FAKSNHIDKAFPQFQFVRSRFPENKPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGIS 144

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
           P+  T+ +++   C    +  ARE F+EM  KG +P+ F +   + G  K G T +   L
Sbjct: 145 PETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLEL 204

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
              M + G  P+ + YN +V   C+ G  +++ +L+ KM  +G +PD +T+ S I A  +
Sbjct: 205 LNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCK 264

Query: 571 MGDLRRGRDLFNNM-LRKGLS---PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRP 626
            G +     +F++M L + L    P  +TY +++      G LE A   F  ++      
Sbjct: 265 EGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLV 324

Query: 627 NVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLY 686
           ++ +YN  + GL R  +  +A  +   M ++GI P+ Y+Y IL++  C  G   +A  + 
Sbjct: 325 SLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIV 384

Query: 687 KEMLDREIEPDYCTHSALL 705
             M    + PD  T+  LL
Sbjct: 385 GLMKRNGVSPDAVTYGCLL 403



 Score = 47.4 bits (111), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 43/212 (20%), Positives = 94/212 (44%), Gaps = 1/212 (0%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           S++  + L+L    K+ + +   + ++M   G+ P++   N  I+ L + G    A  + 
Sbjct: 593 SLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLL 652

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M +  I P++ ++  ++ +FCK  +   A E ++E     C      Y+++       
Sbjct: 653 DEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQE-VFETAVSICGQKEGLYSLMFNELLAA 711

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G+L +A  L+  +L  G ++    Y  ++    +K  L  A  +  +M+ +G     A  
Sbjct: 712 GQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHKMIDKGYGFDPAAL 771

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
             +I GL K G   +A +   +M+    + ++
Sbjct: 772 MPVIDGLGKMGNKKEANNFAEKMMEMASVGEV 803


>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  265 bits (676), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 164/604 (27%), Positives = 305/604 (50%), Gaps = 4/604 (0%)

Query: 106 IALRFFRWVETQPGVKRDEF--VFCTILEILIESGLLRSAYWVVETVVCVNMHG--ILDV 161
           +AL+F +WV  QPG++ +    +      +L+++ L   A  +++ +   N     +  V
Sbjct: 34  LALKFLKWVIKQPGLEPNHLTHILGITTHVLVKARLYGYAKSILKHLAQKNSGSNFLFGV 93

Query: 162 LIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDN 221
           L+        +  + DLL+ +Y ++ MV   +  F+ ML  G  P V  CN I+  +  N
Sbjct: 94  LMDTYPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKN 153

Query: 222 GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY 281
             +      ++ M    + P++ ++N ++   C +G++++A+ +L  M+  G  P  V+Y
Sbjct: 154 CRAHLVWSFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSY 213

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
           N L++   + G  + A  LI  M   G++    +YN  I          +   + ++M  
Sbjct: 214 NTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRN 273

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
           + + P   +YN LI G  K G++  A   F EM+  N+ P++I+YN L+ GYC +GN  E
Sbjct: 274 KMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEE 333

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           A  + D + + ++ P  VT  TL++GL +    +VA+ + E         + I++T+M++
Sbjct: 334 ALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMID 393

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
           G C+ G L  A +   EM + G+ PD   ++  I G  K+G+ ++A  +  ++  +GF P
Sbjct: 394 GLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVP 453

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           + + ++ L++  CK+G++ EA +    M  +G   D+ T  S++ +  E G L    +  
Sbjct: 454 NNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFL 513

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
           +++ R GL P  VT+  +I+ +A  G    AF  F  M   G  P+  TY +L+  LC+ 
Sbjct: 514 HHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKG 573

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
           +   +A  L   +    +  +  +Y  LI E   +GN  EA+RL++EM+   I PD  T+
Sbjct: 574 QNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTY 633

Query: 702 SALL 705
           + +L
Sbjct: 634 TCIL 637



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 149/559 (26%), Positives = 257/559 (45%), Gaps = 36/559 (6%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           + S   Q  LV  KM    + P+  + N +I      G    A  V+  M E  + P+++
Sbjct: 257 RNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLI 316

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TYN +++ +C  G  +EAL +L  M+     PN VT   L+ G  ++ + + AR ++   
Sbjct: 317 TYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERY 376

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
                 ++  S+  +I G    GLL EA  L  EM   GV P + T+++LI G CK G +
Sbjct: 377 CINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNI 436

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
           + A+    ++ R+  +P+ + ++TL+Y  C+ GN+ EA   +  +          T N+L
Sbjct: 437 NKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSL 496

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           +  LC  G L  A++   ++   G++P+ +T+  ++NG   +G+ S A   F+ M+  G 
Sbjct: 497 VASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGH 556

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            P  F Y + +    K  +  EA +L +++       D I+YN L+  + K G+L EA  
Sbjct: 557 HPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVR 616

Query: 545 LLRKMVGDGFIPDHITYT-------------------------------SIIHASLEMGD 573
           L  +M+ +  +PD  TYT                               SI++     G 
Sbjct: 617 LFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGL 676

Query: 574 LRRGRD-----LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
            + G+      LF  M  KGLS  L+    +   ++  G++  A    S+ + K + PN+
Sbjct: 677 FKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNL 736

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
            T+N L++G  R + I   + L+  M   G  PN+ TY  LI   CN G  +  +++ K 
Sbjct: 737 TTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKM 796

Query: 689 MLDREIEPDYCTHSALLLK 707
            +      D  T + L+ K
Sbjct: 797 FIAESSTIDDLTFNMLIRK 815



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 154/558 (27%), Positives = 260/558 (46%), Gaps = 36/558 (6%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           KK   +  L++ + M   G+  DV   N  I  L  N  S +   V + M    I P+ V
Sbjct: 222 KKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEV 281

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           +YNT+++ F KEG++  A  +  EM     SPN +TYN+LI G+  NG  E+A  ++  M
Sbjct: 282 SYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVM 341

Query: 305 --------------LKLGLKVSAH---------------------SYNPIICGYSEKGLL 329
                         L  GL  SA                      S+  +I G    GLL
Sbjct: 342 EANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLL 401

Query: 330 VEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTL 389
            EA  L  EM   GV P + T+++LI G CK G ++ A+    ++ R+  +P+ + ++TL
Sbjct: 402 DEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTL 461

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
           +Y  C+ GN+ EA   +  +          T N+L+  LC  G L  A++   ++   G+
Sbjct: 462 IYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGL 521

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
           +P+ +T+  ++NG   +G+ S A   F+ M+  G  P  F Y + +    K  +  EA +
Sbjct: 522 VPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARK 581

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           L +++       D I+YN L+  + K G+L EA  L  +M+ +  +PD  TYT I+   +
Sbjct: 582 LLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLI 641

Query: 570 EMGDLRRGRDLFNNMLRKG-LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
             G L         +++K  L+   + YT  I      G+ + A   F EM+ KG+  ++
Sbjct: 642 REGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDL 701

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
           I  N++ +G  R+ ++  A  L      + ++PN  T+ IL++      +     +LY  
Sbjct: 702 IALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNL 761

Query: 689 MLDREIEPDYCTHSALLL 706
           M      P+  T+ +L+L
Sbjct: 762 MRRSGFFPNRLTYHSLIL 779



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 134/484 (27%), Positives = 233/484 (48%), Gaps = 21/484 (4%)

Query: 262 ALELL-WEMQGRGCSPN------GVTYNVLIT----GFSRN--GELEQAR-------GLI 301
           AL+ L W ++  G  PN      G+T +VL+     G++++    L Q         G++
Sbjct: 35  ALKFLKWVIKQPGLEPNHLTHILGITTHVLVKARLYGYAKSILKHLAQKNSGSNFLFGVL 94

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
            D   L     A  ++ +I  Y  +G++  A+N    M+ RG  P++ T N+++  + K 
Sbjct: 95  MDTYPLCSSNPA-VFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKN 153

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
            R       F +ML   V P++ S+N L+   C  G + +A  +   +     VPT+V+Y
Sbjct: 154 CRAHLVWSFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSY 213

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           NTL+   C+ G  + A  L  +M  +GI  DV TY + ++  C+    +       +M  
Sbjct: 214 NTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRN 273

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
           K + P+  +Y T I G +K G    A R+  EM+     P+LITYN+L++G C  G+ EE
Sbjct: 274 KMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEE 333

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A  +L  M  +   P+ +T  ++++   +       R++         S   +++TV+I 
Sbjct: 334 ALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMID 393

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
                G L+ AF    EM   G+ P++IT++ LING C++  I++A  +   +  EG +P
Sbjct: 394 GLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVP 453

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYL 721
           N   ++ LI  +C  GN  EA++ Y  M       D  T ++L+    +    V A E+L
Sbjct: 454 NNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFL 513

Query: 722 ESLT 725
             ++
Sbjct: 514 HHIS 517



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 162/606 (26%), Positives = 283/606 (46%), Gaps = 28/606 (4%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           ALR    +E    V+ +E    T+L  L +S     A  ++E   C+N   +        
Sbjct: 334 ALRVLDVMEAND-VRPNEVTIGTLLNGLYKSAKFDVARNILERY-CINRTSL-------- 383

Query: 167 LSSCVSIKIL-DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSV 225
             +C+S  ++ D L     +  ++++   +  +M ++G+ PD+   + +I      G   
Sbjct: 384 --NCISHTVMIDGL----CRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNIN 437

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           KA+EV   +   G  P+ V ++T++ + CK G + EA++    M   G + +  T N L+
Sbjct: 438 KAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLV 497

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
                NG+L +A   +  + ++GL  ++ +++ II GY+  G    A ++ + M++ G  
Sbjct: 498 ASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHH 557

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRK-NVIP---DIISYNTLLYGYCRSGNIGE 401
           P+  TY  L+  LCK     +AR    ++L+K + IP   D ISYNTL+    +SGN+ E
Sbjct: 558 PSPFTYGSLLKVLCKGQNFWEAR----KLLKKLHCIPLAVDTISYNTLIVEISKSGNLLE 613

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP-DVITYTIMV 460
           A  LF+E+   N++P   TY  ++ GL R G L  A      ++ + IL  + I YT  +
Sbjct: 614 AVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFI 673

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
           +G  K G    A   F EM  KGL  D  A  +   G  ++G    A  L  +   K   
Sbjct: 674 DGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVI 733

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           P+L T+N+L+HG  +   +    +L   M   GF P+ +TY S+I      G L  G  +
Sbjct: 734 PNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKM 793

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
               + +  +   +T+ +LI        L+        M+V  +  +  T  A+ + L R
Sbjct: 794 LKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVR 853

Query: 641 LRRIDQAYGLFI-DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
            R + Q Y +F+ +M ++G +P    Y  ++   C  G+ Q A +L  +M+   I  D  
Sbjct: 854 -RMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDA 912

Query: 700 THSALL 705
              A++
Sbjct: 913 AECAMV 918



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 137/571 (23%), Positives = 252/571 (44%), Gaps = 38/571 (6%)

Query: 181  LIYT--KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
            LIY   K   V + +  +  M  NG   D   CN ++  L +NG  V+A E    +   G
Sbjct: 461  LIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIG 520

Query: 239  IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
            + P+ VT++ +++ +   G+   A  +   M   G  P+  TY  L+    +     +AR
Sbjct: 521  LVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEAR 580

Query: 299  GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
             L++ +  + L V   SYN +I   S+ G L+EA+ L EEM+   + P   TY  ++ GL
Sbjct: 581  KLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGL 640

Query: 359  CKWGRVSDARHRFFEMLRKNVIP-DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
             + GR+  A      +++K ++  + I Y   + G  ++G    A  LF E+  + L   
Sbjct: 641  IREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLD 700

Query: 418  VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
            ++  N++ DG  R G +  A  L     N+ ++P++ T+ I+++G  +  ++    + +N
Sbjct: 701  LIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYN 760

Query: 478  EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
             M R G  P+R  Y + I G    G      ++ +  +A+    D +T+N+L+   C++ 
Sbjct: 761  LMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEIN 820

Query: 538  SLEE-----------------------ANELLRKMVG------------DGFIPDHITYT 562
             L++                        + L+R+MV              GFIP    Y 
Sbjct: 821  DLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYC 880

Query: 563  SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
            +++     +GD++    L + M+  G+S        ++   A  G++E A      M   
Sbjct: 881  TMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRM 940

Query: 623  GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
               P   T+  L++  C+     +A+ L I ME   +  +   Y +LI+  C  G+   A
Sbjct: 941  KKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITA 1000

Query: 683  LRLYKEMLDREIEPDYCTHSALLLKQLDKDY 713
            L  Y+E+  + + P+  T+  L+     K Y
Sbjct: 1001 LDFYEEIKQKGLLPNMTTYRVLVSAISTKHY 1031



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 129/507 (25%), Positives = 237/507 (46%), Gaps = 5/507 (0%)

Query: 195  VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
            VF++M+  G  P       ++KVL       +AR++ + +    +    ++YNT++    
Sbjct: 547  VFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEIS 606

Query: 255  KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI-RDMLKLGLKVSA 313
            K G + EA+ L  EM      P+  TY  +++G  R G L  A   + R M K  L +++
Sbjct: 607  KSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNS 666

Query: 314  HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
              Y   I G  + G    AL L +EM  +G++  L   N +  G  + G+V  A     +
Sbjct: 667  IVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISK 726

Query: 374  MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
               KNVIP++ ++N LL+GY R  +I   F L++ +R     P  +TY++LI GLC +G 
Sbjct: 727  TRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGM 786

Query: 434  LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN--EMLRKGLQPDRFAY 491
            LE+  ++ +  I +    D +T+ +++   C++ +L    +  +  E+ R  L  D    
Sbjct: 787  LELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKA 846

Query: 492  TTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
             T +   ++   +   +    EML KGF P    Y  ++  +C++G ++ A +L  +MV 
Sbjct: 847  VTDVL--VRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVA 904

Query: 552  DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLEL 611
             G   D     +++      G +     +   MLR    PT  T+T L+H    +   + 
Sbjct: 905  LGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKE 964

Query: 612  AFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
            A      M+   ++ +++ YN LI+  C    +  A   + +++++G+LPN  TY +L++
Sbjct: 965  AHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVS 1024

Query: 672  ENCNAGNWQEALRLYKEMLDREIEPDY 698
                         + K++ DR +   Y
Sbjct: 1025 AISTKHYVSRGEIVLKDLNDRGLVSGY 1051



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/379 (23%), Positives = 164/379 (43%), Gaps = 35/379 (9%)

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           ++ L+  Y R G +G A   F  +  R   P+V T N ++  + +     +     + M+
Sbjct: 108 FDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFFKQML 167

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
              + P+V ++ I+++  C  G L  A      M R G  P   +Y T ++   K G   
Sbjct: 168 TSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFK 227

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
            A  L   M  KG   D+ TYN+ +  LC+     +   +L+KM      P+ ++Y ++I
Sbjct: 228 FALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLI 287

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
           +  ++ G +     +FN M+   LSP L+TY +LI+ +   G  E A      M+   +R
Sbjct: 288 NGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVR 347

Query: 626 PN-----------------------------------VITYNALINGLCRLRRIDQAYGL 650
           PN                                    I++  +I+GLCR   +D+A+ L
Sbjct: 348 PNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQL 407

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLD 710
            I+M ++G+ P+  T+++LIN  C  GN  +A  +  ++      P+    S L+     
Sbjct: 408 LIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCK 467

Query: 711 KDYKVHAVEYLESLTLGAE 729
                 A+++  ++ L  +
Sbjct: 468 VGNVYEAMKFYAAMNLNGQ 486



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 84/373 (22%), Positives = 153/373 (41%), Gaps = 35/373 (9%)

Query: 222  GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY 281
            G S  A  +++ M E G+   ++  N++ D + + G++  A  L+ + + +   PN  T+
Sbjct: 680  GQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTF 739

Query: 282  NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
            N+L+ G+SR  ++     L   M + G   +  +Y+ +I G    G+L   + + +  + 
Sbjct: 740  NILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIA 799

Query: 342  RGVAPTLATYNILIYGLCKWG---RVSDARHRF--------------------------- 371
                    T+N+LI   C+     +V D  H                             
Sbjct: 800  ESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQN 859

Query: 372  -----FEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
                  EML+K  IP    Y T++   CR G+I  AF L D++ +  +         ++ 
Sbjct: 860  YFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVR 919

Query: 427  GLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
            GL   G +E A  + + M+    +P   T+T +++  CK  N   A      M    ++ 
Sbjct: 920  GLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKL 979

Query: 487  DRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
            D  AY   I+     GD   A    EE+  KG  P++ TY VLV  +     +     +L
Sbjct: 980  DIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVL 1039

Query: 547  RKMVGDGFIPDHI 559
            + +   G +  ++
Sbjct: 1040 KDLNDRGLVSGYL 1052



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/292 (19%), Positives = 125/292 (42%), Gaps = 35/292 (11%)

Query: 172  SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
            ++   ++LL  Y++   +  C  ++N M R+G  P+    + +I  L ++G      ++ 
Sbjct: 735  NLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKML 794

Query: 232  RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL-------------------------- 265
            +M          +T+N ++   C+  ++ + ++L                          
Sbjct: 795  KMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRR 854

Query: 266  ---------LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSY 316
                     + EM  +G  P    Y  ++    R G+++ A  L   M+ LG+ +   + 
Sbjct: 855  MVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAE 914

Query: 317  NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
              ++ G +  G + EA+ + + M+     PT +T+  L++  CK     +A +    M  
Sbjct: 915  CAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEH 974

Query: 377  KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
              V  DI++YN L+   C +G++  A   ++E++ + L+P + TY  L+  +
Sbjct: 975  YRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAI 1026



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/183 (21%), Positives = 85/183 (46%), Gaps = 14/183 (7%)

Query: 127  FCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKK 186
            +CT+++ +   G ++ A+ + + +V + +   LD       + C  ++ L L        
Sbjct: 879  YCTMMKRMCRVGDIQGAFKLKDQMVALGIS--LD-----DAAECAMVRGLALC------- 924

Query: 187  SMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTY 246
              +E+ + +  +MLR   +P       ++ V        +A  +  +M  + +K  IV Y
Sbjct: 925  GKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAY 984

Query: 247  NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
            N ++ + C  G++  AL+   E++ +G  PN  TY VL++  S    + +   +++D+  
Sbjct: 985  NVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLND 1044

Query: 307  LGL 309
             GL
Sbjct: 1045 RGL 1047


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  265 bits (676), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 153/496 (30%), Positives = 260/496 (52%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
           FN+MLR    P +    +I+  L           +++ M   GI+ + +T N +++S+C 
Sbjct: 37  FNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCH 96

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
             ++  A  +  ++   G  P+ +TY  LI G   NG+++++      ++  G+K+   S
Sbjct: 97  LRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVS 156

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           Y  +I G  + G    AL L  ++      P +  YN +I GLCK   V DA   + EM 
Sbjct: 157 YGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMF 216

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
            K V P++++Y +L+YG+C  G + +AF L +E+  +N+ P V T+NTL+DGLC+ G + 
Sbjct: 217 EKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMR 276

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            A+ L   M+ +G+ PDV TY  +++G   +     A+  FN M + G+  D  +Y+  I
Sbjct: 277 EAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMI 336

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
           +G  K+    EA  L E M  +   PD++ Y+ L+ GLCK G +  A + + +M   G  
Sbjct: 337 SGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQP 396

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           P+ ITYTS+I A  +   + +   L   +  +G+   + TY +L+      GRL  A   
Sbjct: 397 PNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKV 456

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
           F ++ +KG   +V+TY+ +INGLC+    D+A  L   ME++G +P+   Y  +IN    
Sbjct: 457 FQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFE 516

Query: 676 AGNWQEALRLYKEMLD 691
                +A +L +EM+D
Sbjct: 517 KDMNDKAEKLLREMID 532



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 245/484 (50%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P I+ +  +L S  K       + L   M+  G   N +T N+LI  +    ++  A  +
Sbjct: 47  PPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSV 106

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
              +LKLG +    +Y  +I G    G + E+LN  + +V++G+     +Y  LI GLCK
Sbjct: 107 FAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCK 166

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G+   A     ++  +   PD++ YNT++ G C+   + +AF L+ E+  + + P VVT
Sbjct: 167 IGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVT 226

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y +LI G C  G L+ A  L   M+ + + P+V T+  +V+G CK G +  A+     M+
Sbjct: 227 YTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMM 286

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           ++G+ PD F Y   + G   + +  +A  +   M   G   D+ +Y+V++ GL K+  L+
Sbjct: 287 KEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLD 346

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA +L   M  +  IPD + Y+S+I    + G +       + M  +G  P ++TYT LI
Sbjct: 347 EAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLI 406

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
            A     +++ A     +++ +GI+ N+ TYN L++GLC+  R+  A  +F D+  +G  
Sbjct: 407 DALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHN 466

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
            +  TY+I+IN  C    + EAL L  +M D+   PD   +  ++    +KD    A + 
Sbjct: 467 VDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKL 526

Query: 721 LESL 724
           L  +
Sbjct: 527 LREM 530



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 132/445 (29%), Positives = 228/445 (51%), Gaps = 35/445 (7%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
           L++L+  Y     +     VF K+L+ G  PD+     +I+ L  NG   ++   +  + 
Sbjct: 87  LNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLV 146

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
             GIK   V+Y T+++  CK G+   AL LL +++G  C P+ V YN +I G  ++  + 
Sbjct: 147 SQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVR 206

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
            A  L  +M +  +  +  +Y  +I G+   G L +A  L  EMV + V P + T+N L+
Sbjct: 207 DAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLV 266

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY------CRSGNI---------- 399
            GLCK G++ +A+     M+++ V PD+ +YN L+ GY       ++ N+          
Sbjct: 267 DGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVT 326

Query: 400 -------------------GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
                               EA  LF+ +R+ N++P VV Y++LIDGLC+ G +  A + 
Sbjct: 327 CDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKY 386

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
            + M ++G  P+VITYT +++  CK   +  A     ++  +G+Q + + Y   + G  K
Sbjct: 387 VDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCK 446

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
            G  ++A ++ +++L KG   D++TY+++++GLCK    +EA  LL KM   G +PD I 
Sbjct: 447 DGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIA 506

Query: 561 YTSIIHASLEMGDLRRGRDLFNNML 585
           Y +II+A  E     +   L   M+
Sbjct: 507 YETIINAFFEKDMNDKAEKLLREMI 531



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/447 (26%), Positives = 202/447 (45%), Gaps = 70/447 (15%)

Query: 329 LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNT 388
           L +A++    M+     P +  +  ++  L K        H F  M    +  + I+ N 
Sbjct: 30  LNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNI 89

Query: 389 LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
           L+  YC    I  AF +F ++      P ++TY TLI GLC  G ++ +    + +++QG
Sbjct: 90  LINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQG 149

Query: 449 ILPDVITYTIMVNGSCKMGNLSMA--------------------------------REFF 476
           I  D ++Y  ++NG CK+G    A                                R+ F
Sbjct: 150 IKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAF 209

Query: 477 N---EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
           +   EM  K + P+   YT+ I G   +G   +A+ L  EM+ K   P++ T+N LV GL
Sbjct: 210 DLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGL 269

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS--- 590
           CK G + EA  L+  M+ +G  PD  TY +++     + +  + +++FN M + G++   
Sbjct: 270 CKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDV 329

Query: 591 --------------------------------PTLVTYTVLIHAHAARGRLELAFMYFSE 618
                                           P +V Y+ LI      GR+  A  Y  E
Sbjct: 330 HSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDE 389

Query: 619 MQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGN 678
           M  +G  PNVITY +LI+ LC+  ++D+A  L   ++++GI  N YTY IL++  C  G 
Sbjct: 390 MHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGR 449

Query: 679 WQEALRLYKEMLDREIEPDYCTHSALL 705
             +A ++++++L +    D  T+S ++
Sbjct: 450 LTDAQKVFQDLLMKGHNVDVVTYSIMI 476



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 145/274 (52%)

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
           N+ +A   F+ +      P ++ +  ++  L +     +   L + M   GI  + IT  
Sbjct: 29  NLNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLN 88

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
           I++N  C +  ++ A   F ++L+ G QPD   YTT I G    G   E+    + ++++
Sbjct: 89  ILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQ 148

Query: 518 GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
           G   D ++Y  L++GLCK+G    A  LLRK+ G+   PD + Y +II    +   +R  
Sbjct: 149 GIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDA 208

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
            DL+  M  K + P +VTYT LI+     G+L+ AF   +EM +K + PNV T+N L++G
Sbjct: 209 FDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDG 268

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
           LC+  ++ +A  L   M +EG+ P+ +TY  L++
Sbjct: 269 LCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMD 302


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  265 bits (676), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 155/497 (31%), Positives = 252/497 (50%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
           FN++L     P +    +I+  L        A  ++R M   GI   +VT+N +++ F +
Sbjct: 44  FNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQ 103

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
            G    +  +   +  +G  PN +T   LI G    G++ QA      ++ LG  ++   
Sbjct: 104 LGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVC 163

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           Y  +I G  + G    AL L   +  + V P +  YN +I  +CK   V++A   + EM+
Sbjct: 164 YGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 223

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
            K + PD+++Y+ L+ G+C  G + +A  LF+++ S  + P V T++ L+DG C+ G ++
Sbjct: 224 SKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVK 283

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            A+ +   M+ QGI PDV+TY  +++G C +  ++ A+  FN M + G+  +  +Y   I
Sbjct: 284 EAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMI 343

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
            G  K+    EA  L +EM  K   PD++TYN L+ GLCK G +  A +L+ +M   G  
Sbjct: 344 NGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVP 403

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
            D ITY SI+ A  +   + +   L   M  +G+ P + TYT+LI      GRL+ A   
Sbjct: 404 HDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNI 463

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
           F ++ VKG    V TY  +I G C     D+A  L   ME+ G +PN  TY I+I     
Sbjct: 464 FEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFE 523

Query: 676 AGNWQEALRLYKEMLDR 692
                 A +L +EM+ R
Sbjct: 524 KDENDMAEKLLREMIAR 540



 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 146/472 (30%), Positives = 251/472 (53%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P I  +  +L S  K    Q A+ L  EM+  G + + VT+N+LI  FS+ G    +  +
Sbjct: 54  PPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSV 113

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
             ++LK G + +A +   +I G   KG + +AL+  +++V  G       Y  LI GLCK
Sbjct: 114 FANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCK 173

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G+ S A      +  K V P+++ YNT++   C+   + EAF L+ E+ S+ + P VVT
Sbjct: 174 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 233

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y+ LI G C  G L  A  L   MI++ I PDV T++I+V+G CK G +  A+     M+
Sbjct: 234 YSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMM 293

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           ++G++PD   Y + + G   +   ++A  +   M   G   ++ +YN++++G CK+  ++
Sbjct: 294 KQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVD 353

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA  L ++M     IPD +TY S+I    + G +     L + M  +G+    +TY  ++
Sbjct: 354 EAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSIL 413

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
            A     +++ A    ++M+ +GI+P++ TY  LI+GLC+  R+  A  +F D+  +G  
Sbjct: 414 DALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYN 473

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
              YTYT++I   C+   + +AL L  +M D    P+  T+  ++L   +KD
Sbjct: 474 ITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKD 525



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 146/463 (31%), Positives = 240/463 (51%)

Query: 198 KMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG 257
           +M  NG+  D+   N +I      G +  +  V+  + + G +P+ +T  T++   C +G
Sbjct: 81  EMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKG 140

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
           ++ +AL    ++   G   N V Y  LI G  + G+   A  L+R +    ++ +   YN
Sbjct: 141 QIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYN 200

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            II    +  L+ EA +L  EMV++G++P + TY+ LI G C  G+++DA   F +M+ +
Sbjct: 201 TIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISE 260

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
            + PD+ +++ L+ G+C+ G + EA  +   +  + + P VVTY +L+DG C    +  A
Sbjct: 261 EINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKA 320

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
           + +   M   G+  +V +Y IM+NG CK+  +  A   F EM  K + PD   Y + I G
Sbjct: 321 KSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDG 380

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
             K G  S A +L +EM  +G P D ITYN ++  LCK   +++A  LL KM  +G  PD
Sbjct: 381 LCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPD 440

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
             TYT +I    + G L+  +++F ++L KG + T+ TYTV+I         + A    S
Sbjct: 441 MYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLS 500

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
           +M+  G  PN  TY  +I  L      D A  L  +M   G+L
Sbjct: 501 KMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGLL 543



 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 131/404 (32%), Positives = 219/404 (54%)

Query: 186 KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVT 245
           K  + Q L   +K++  G   +      +I  L   G +  A ++ R +    ++P++V 
Sbjct: 139 KGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVM 198

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           YNT++DS CK   + EA +L  EM  +G SP+ VTY+ LI+GF   G+L  A GL   M+
Sbjct: 199 YNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMI 258

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
              +    ++++ ++ G+ ++G + EA N+   M+ +G+ P + TY  L+ G C   +V+
Sbjct: 259 SEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVN 318

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
            A+  F  M +  V  ++ SYN ++ G+C+   + EA  LF E+  +N++P VVTYN+LI
Sbjct: 319 KAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLI 378

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           DGLC+ G +  A +L + M ++G+  D ITY  +++  CK   +  A     +M  +G+Q
Sbjct: 379 DGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQ 438

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           PD + YT  I G  K G   +A  + E++L KG+   + TY V++ G C     ++A  L
Sbjct: 439 PDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALAL 498

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           L KM  +G IP+  TY  II +  E  +      L   M+ +GL
Sbjct: 499 LSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGL 542



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 177/335 (52%)

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
           F  +L  N  P I  +  +L    +      A  L  E+    +   +VT+N LI+   +
Sbjct: 44  FNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQ 103

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
            G    +  +  N++ +G  P+ IT T ++ G C  G +  A  F ++++  G   ++  
Sbjct: 104 LGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVC 163

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           Y T I G  K+G TS A +L   +  K   P+++ YN ++  +CK+  + EA +L  +MV
Sbjct: 164 YGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 223

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
             G  PD +TY+++I     +G L     LFN M+ + ++P + T+++L+      GR++
Sbjct: 224 SKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVK 283

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
            A    + M  +GI+P+V+TY +L++G C ++++++A  +F  M + G+  N  +Y I+I
Sbjct: 284 EAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMI 343

Query: 671 NENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           N  C      EA+ L+KEM  + I PD  T+++L+
Sbjct: 344 NGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLI 378



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/302 (25%), Positives = 145/302 (48%), Gaps = 32/302 (10%)

Query: 117 QPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKIL 176
           + G+K D   +C++++           Y +V+ V       I + +  GG+++  +++  
Sbjct: 294 KQGIKPDVVTYCSLMD----------GYCLVKQVN--KAKSIFNTMAQGGVTA--NVQSY 339

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           ++++  + K   V++ + +F +M    ++PDV   N +I  L  +G    A ++   M +
Sbjct: 340 NIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHD 399

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G+    +TYN++LD+ CK  ++ +A+ LL +M+  G  P+  TY +LI G  + G L+ 
Sbjct: 400 RGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKD 459

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A+ +  D+L  G  ++ ++Y  +I G+ +  L  +AL L  +M   G  P   TY I+I 
Sbjct: 460 AQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIIL 519

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL--RSRNL 414
            L +      A     EM+ +           LL+G+       +A+ LF     R  NL
Sbjct: 520 SLFEKDENDMAEKLLREMIARG----------LLFGW------KKAYCLFTRFFQRRSNL 563

Query: 415 VP 416
            P
Sbjct: 564 YP 565


>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
 gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
          Length = 896

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 162/535 (30%), Positives = 270/535 (50%), Gaps = 1/535 (0%)

Query: 171 VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV 230
           V + +   L+    ++  VE  L + +++  + L PD+   N  I      G    A + 
Sbjct: 215 VGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKF 274

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
           +  +   G+KP  V+Y +M+   CK G + EA EL  +M+     P    YN +I G+  
Sbjct: 275 FHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGS 334

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
            G+ E A  L+  + + G   S  S+N I+    +K  + EAL L E M  +   P  +T
Sbjct: 335 AGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAM-KKDAEPNSST 393

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           YNI+I  LC  G+V +A     EM    + P++++ N ++   C++     A+ +F+   
Sbjct: 394 YNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETAS 453

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
            R   P  VTY +LIDGL + G+++ A +L ENM++ G   + + YT ++      G   
Sbjct: 454 QRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKE 513

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
              + F EM R+G QPD     T +    K GD  +   + E++   GF PD+ +Y++L+
Sbjct: 514 DGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILI 573

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
           HGL K G   E + +   M   GF  D   Y +++    + G L +  ++   M  K + 
Sbjct: 574 HGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVP 633

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           PT+ TY  +I   A   RL+ A+M F E + KGI  NVI Y++LI+G  ++ RID+AY +
Sbjct: 634 PTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLI 693

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             +M ++G+ PN YT+  L++    A    EAL  ++ M + +  P+  T+S L+
Sbjct: 694 LEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILI 748



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 176/681 (25%), Positives = 313/681 (45%), Gaps = 56/681 (8%)

Query: 83  FQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRS 142
           F+   S   +L+  +   R+ P  AL   R ++ + G +    +F T++  L   G +  
Sbjct: 178 FRPAFSAYTVLIGAMAEARQ-PERALELLRQMQ-EVGYEVGVPLFTTLVRALAREGRVEG 235

Query: 143 AYWVVETVVCVNMHGILDVLIGGGLSSCVSIKIL--DLLLLIYTKKSMVEQCLLVFNKML 200
           A  +V+ V                  SC+   I+  ++ +  + K   V+     F+++ 
Sbjct: 236 ALALVDEVK----------------GSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELK 279

Query: 201 RNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQ 260
             GL PD  +   +I VL   G   +A E++  M      P    YNTM+  +   G+ +
Sbjct: 280 SQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFE 339

Query: 261 EALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII 320
            A +LL +++ RGC P+ V++N ++T   +  ++++A  L   M K   + ++ +YN II
Sbjct: 340 NAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKK-DAEPNSSTYNIII 398

Query: 321 CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
                 G + EA  + +EM   G+ P L T NI++  LCK  +   A   F    ++   
Sbjct: 399 DMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCN 458

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFD--------------------------------- 407
           P+ ++Y +L+ G  + GN+ +A+ LF+                                 
Sbjct: 459 PNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKI 518

Query: 408 --ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
             E+  R   P +   NT +D + + GD+E  + + E++   G LPDV +Y+I+++G  K
Sbjct: 519 FKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTK 578

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
            G        F+ M ++G   D  AY   + G  K G   +AY + EEM  K  PP + T
Sbjct: 579 AGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVAT 638

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           Y  ++ GL K+  L+EA  L  +    G   + I Y+S+I    ++G +     +   M+
Sbjct: 639 YGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMM 698

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
           +KGL+P + T+  L+ A      +  A + F  M+     PN  TY+ LINGLCR+++ +
Sbjct: 699 KKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYN 758

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +A+  + +M+++G++PN  TYT +I      GN  +A  L++        PD  + +AL+
Sbjct: 759 KAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALI 818

Query: 706 LKQLDKDYKVHAVEYLESLTL 726
                 +  + A    E   L
Sbjct: 819 EGMSHANRAIEAYHVFEETRL 839



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 152/567 (26%), Positives = 256/567 (45%), Gaps = 75/567 (13%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A  V   M     +P+   Y  ++ +  +  + + ALELL +MQ  G       +  L+ 
Sbjct: 166 AERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVR 225

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
             +R G +E A  L+ ++    L+     YN  I  + + G +  A     E+ ++G+ P
Sbjct: 226 ALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKP 285

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
              +Y  +I+ LCK GR+S+A   F +M  +  +P   +YNT++ GY  +G    A+ L 
Sbjct: 286 DDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLL 345

Query: 407 DELRSRNLVPTVV----------------------------------TYNTLIDGLCRYG 432
           D+L+ R  +P+VV                                  TYN +ID LC  G
Sbjct: 346 DQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAEPNSSTYNIIIDMLCMAG 405

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
            +E A  +++ M + G+ P+++T  IMV+  CK      A E F    ++G  P+   Y 
Sbjct: 406 KVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYC 465

Query: 493 TQIAGELKLGDTSEAYRLQEEMLA-----------------------------------K 517
           + I G  K G+  +AYRL E ML                                    +
Sbjct: 466 SLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRR 525

Query: 518 GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
           G  PDL   N  +  + K G +E+   +   + G GF+PD  +Y+ +IH   + G  R  
Sbjct: 526 GCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARET 585

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
             +F+ M ++G +     Y  ++      G+L+ A+    EM+VK + P V TY ++I+G
Sbjct: 586 SSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDG 645

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           L ++ R+D+AY LF + + +GI  N   Y+ LI+     G   EA  + +EM+ + + P+
Sbjct: 646 LAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 705

Query: 698 YCTHSALLLKQLDKDYKVHAVEYLESL 724
             T ++L+      D  V A E  E+L
Sbjct: 706 VYTWNSLM------DALVKAEEINEAL 726



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 159/601 (26%), Positives = 286/601 (47%), Gaps = 64/601 (10%)

Query: 106 IALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSA---YWVVET---VVCV------ 153
           +A +FF  +++Q G+K D+  + +++ +L ++G L  A   +  +ET   V C       
Sbjct: 270 MAWKFFHELKSQ-GLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTM 328

Query: 154 -----------NMHGILDVLIGGGLSSCV-SIKILDLLLLIYTKKSMVEQCLLVFNKMLR 201
                      N + +LD L   G   C+ S+   + +L    KK  V++ L +F  M +
Sbjct: 329 IMGYGSAGQFENAYKLLDQLKERG---CIPSVVSFNSILTCLGKKRKVDEALTLFEAMKK 385

Query: 202 NGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQE 261
           +   P+    N II +L   G   +A  +   M   G+ P+++T N M+D  CK  + + 
Sbjct: 386 DAE-PNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEP 444

Query: 262 ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC 321
           A E+      RGC+PN VTY  LI G  + G ++ A  L  +ML  G   +   Y  +I 
Sbjct: 445 AYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIR 504

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLA-------------------------------- 349
            +   G   +   + +EM  RG  P L                                 
Sbjct: 505 NFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLP 564

Query: 350 ---TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
              +Y+ILI+GL K G+  +    F  M ++    D  +YN ++ G+C+SG + +A+ + 
Sbjct: 565 DVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVL 624

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
           +E++ + + PTV TY ++IDGL +   L+ A  L E   ++GI  +VI Y+ +++G  K+
Sbjct: 625 EEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKV 684

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G +  A     EM++KGL P+ + + + +   +K  + +EA    + M      P+  TY
Sbjct: 685 GRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTY 744

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           ++L++GLC++    +A    ++M   G +P+ +TYT++I    ++G++     LF     
Sbjct: 745 SILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKA 804

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
            G +P   ++  LI   +   R   A+  F E ++KG R NV    +L++ L +   ++Q
Sbjct: 805 NGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNKAECLEQ 864

Query: 647 A 647
           A
Sbjct: 865 A 865



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/472 (26%), Positives = 226/472 (47%), Gaps = 6/472 (1%)

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++ +  +   + +A  ++  M+     P    Y VLI   +   + E+A  L+R M ++G
Sbjct: 153 LVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVG 212

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            +V    +  ++   + +G +  AL L +E+    + P +  YN+ I    K G V  A 
Sbjct: 213 YEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAW 272

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F E+  + + PD +SY ++++  C++G + EA  LF ++ +   VP    YNT+I G 
Sbjct: 273 KFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGY 332

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
              G  E A +L + +  +G +P V+++  ++    K   +  A   F E ++K  +P+ 
Sbjct: 333 GSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLF-EAMKKDAEPNS 391

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             Y   I      G   EAY +++EM   G  P+L+T N++V  LCK    E A E+   
Sbjct: 392 STYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFET 451

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
               G  P+ +TY S+I    + G++     LF NML  G +   V YT LI      GR
Sbjct: 452 ASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGR 511

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
            E     F EM  +G +P++   N  ++ + +   +++   +F D++  G LP+  +Y+I
Sbjct: 512 KEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSI 571

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL-----LKQLDKDYKV 715
           LI+    AG  +E   ++  M  +    D   ++A++       +LDK Y+V
Sbjct: 572 LIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEV 623



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 182/381 (47%), Gaps = 3/381 (0%)

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
           + A +YN ++   S     +E +  E  ++  GV P  A  + L+  L +  R+ DA   
Sbjct: 112 LPADAYNAVLPFLSHDLAAMEKVLEEMSVLGYGV-PNPACAD-LVSALVRTRRLDDAERV 169

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
              M R    P   +Y  L+     +     A  L  +++       V  + TL+  L R
Sbjct: 170 IAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAR 229

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
            G +E A  L + +    + PD++ Y + ++   K GN+ MA +FF+E+  +GL+PD  +
Sbjct: 230 EGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVS 289

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           YT+ I    K G  SEA  L  +M  +   P    YN ++ G    G  E A +LL ++ 
Sbjct: 290 YTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLK 349

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
             G IP  +++ SI+    +   +     LF  M +K   P   TY ++I      G++E
Sbjct: 350 ERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAM-KKDAEPNSSTYNIIIDMLCMAGKVE 408

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
            A+M   EM+  G+ PN++T N +++ LC+ ++ + AY +F    + G  PN  TY  LI
Sbjct: 409 EAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLI 468

Query: 671 NENCNAGNWQEALRLYKEMLD 691
           +     GN  +A RL++ MLD
Sbjct: 469 DGLGKKGNVDDAYRLFENMLD 489



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 111/225 (49%), Gaps = 2/225 (0%)

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           +A R+   M    F P    Y VL+  + +    E A ELLR+M   G+      +T+++
Sbjct: 165 DAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLV 224

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
            A    G +     L + +    L P +V Y V I      G +++A+ +F E++ +G++
Sbjct: 225 RALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLK 284

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           P+ ++Y ++I  LC+  R+ +A  LF  ME E  +P  Y Y  +I    +AG ++ A +L
Sbjct: 285 PDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKL 344

Query: 686 YKEMLDREIEPDYCTHSALLLKQLDKDYKV-HAVEYLESLTLGAE 729
             ++ +R   P   + ++ +L  L K  KV  A+   E++   AE
Sbjct: 345 LDQLKERGCIPSVVSFNS-ILTCLGKKRKVDEALTLFEAMKKDAE 388


>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
 gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
          Length = 684

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 151/505 (29%), Positives = 255/505 (50%), Gaps = 4/505 (0%)

Query: 201 RNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQ 260
           R  + P  ++ N ++  L        A  +YR M    + P+  T+     + C+ G  +
Sbjct: 138 RFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAR 197

Query: 261 EALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII 320
           +AL LL  M   GC P+ V Y  +I      G + +A  L+ +ML +G     +++N ++
Sbjct: 198 DALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVV 257

Query: 321 CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
            G    G + EA  L + M+  G  P++ TY  L+ GLC+  +  +A    + ML +   
Sbjct: 258 LGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEA----YAMLGRVPE 313

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
            +++  NT++ G    G +  A  L++ + S+   P V TYN L+ GLC+ G    A ++
Sbjct: 314 VNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRM 373

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
            + M  +G  P+++TY+ +++  C+ G    AR   ++M  KG   +   Y   I    K
Sbjct: 374 LDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGK 433

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
            G   EA RL +EM ++G  PD+ TYN +++ LC    ++EA  +   ++ +G + + IT
Sbjct: 434 DGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGIT 493

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           Y ++IHA L  G  + G  L N M+  G    +V+Y  LI A    G ++ + M   EM 
Sbjct: 494 YNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMM 553

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
            KGI+PN  +YN LIN LC+  ++  A  L  +M  +G+ P+  TY  LIN  C  G   
Sbjct: 554 TKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTH 613

Query: 681 EALRLYKEMLDREIEPDYCTHSALL 705
            AL L +++ +  + PD  T++ L+
Sbjct: 614 AALNLLEKLPNENVHPDIVTYNILI 638



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 158/493 (32%), Positives = 244/493 (49%), Gaps = 4/493 (0%)

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
           +M   F + PS  +YN +L +  +     +AL L   M      P   T+ V      R 
Sbjct: 134 QMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRL 193

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G    A  L+R M + G    A  Y  +I     +G + EA  L +EM+  G A  + T+
Sbjct: 194 GRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTF 253

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           N ++ GLC  G V +A      M+     P +++Y  LL G CR+    EA+ +   +  
Sbjct: 254 NDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPE 313

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
            N    VV  NT+I G    G L  A +L E M ++G  PDV TY I+++G CK+G    
Sbjct: 314 VN----VVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGS 369

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A    +EM  KG  P+   Y+T +    + G   +A  + ++M AKGF  +   YN +++
Sbjct: 370 AVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIY 429

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
            L K G L+EA  L+++M   G  PD  TY +II+       +     +F N+L +G+  
Sbjct: 430 ALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVA 489

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
             +TY  LIHA    GR +      +EM + G   +V++YN LI  LC+   +D++  L 
Sbjct: 490 NGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLL 549

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDK 711
            +M  +GI PN ++Y +LINE C AG  ++AL L KEML++ + PD  T++ L+      
Sbjct: 550 EEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKV 609

Query: 712 DYKVHAVEYLESL 724
            +   A+  LE L
Sbjct: 610 GWTHAALNLLEKL 622



 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 148/478 (30%), Positives = 243/478 (50%), Gaps = 4/478 (0%)

Query: 193 LLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDS 252
           L +   M R+G +PD      +I  L   G   +A  +   M   G    + T+N ++  
Sbjct: 200 LALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLG 259

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
            C  G ++EA  L+  M   GC+P+ VTY  L+ G  R  + ++A      ML    +V+
Sbjct: 260 LCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYA----MLGRVPEVN 315

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
               N +I G   +G L  A  L E M ++G  P + TYNIL++GLCK GR   A     
Sbjct: 316 VVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLD 375

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
           EM  K   P+I++Y+TLL+ +CR+G   +A  + D++ ++        YN +I  L + G
Sbjct: 376 EMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDG 435

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
            L+ A +L + M +QG  PD+ TY  ++   C    +  A   F  +L +G+  +   Y 
Sbjct: 436 KLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYN 495

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
           T I   L  G   E  RL  EM+  G P D+++YN L+  LCK G+++ +  LL +M+  
Sbjct: 496 TLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTK 555

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
           G  P++ +Y  +I+   + G +R   +L   ML +GL+P +VTY  LI+     G    A
Sbjct: 556 GIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAA 615

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
                ++  + + P+++TYN LI+  C++R +D A  L       GI+PN+ T+ +++
Sbjct: 616 LNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMV 673



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 158/349 (45%), Gaps = 9/349 (2%)

Query: 367 ARHRFFEMLRK-NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
           A H   +M R+  V P   SYN +L    R+    +A LL+  +    + PT  T+    
Sbjct: 128 ALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAA 187

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
             LCR G    A  L   M   G +PD + Y  +++     G ++ A    +EML  G  
Sbjct: 188 RALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCA 247

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
            D   +   + G   LG   EA RL + M+  G  P ++TY  L+ GLC+    +EA  +
Sbjct: 248 ADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAM 307

Query: 546 LRKMVGDGFIPDH--ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
           L      G +P+   +   ++I   L  G L R  +L+  M  KG  P + TY +L+H  
Sbjct: 308 L------GRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGL 361

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
              GR   A     EM+ KG  PN++TY+ L++  CR    D A  +   M  +G   N 
Sbjct: 362 CKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNS 421

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
             Y  +I      G   EA+RL +EM  +  +PD CT++ ++    + D
Sbjct: 422 QGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNND 470


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 155/524 (29%), Positives = 259/524 (49%), Gaps = 1/524 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +++ L  FN+ML     P   + NR++  +           + R M  FGI P + T   
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++S C    +  A   L ++   G  P+  T+  LI G    G++ +A  L   M+  G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            + +  +Y  +I G  + G    A+ L   M      P +  ++ LI  LCK  +V++A 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
           + F EM+ K + P+I++YN+L++G C+         L +E+    ++P V T NT++D L
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G +  A  + + MI++G+ P+V+TY  +++G C    + +A + F+ M+ K    + 
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANV 350

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
            +Y T I G  K+    +A  L EEM  +   P+ +TYN L+HGLC +G L++A  L  +
Sbjct: 351 ISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHE 410

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           MV  G IPD +TY ++     +   L +   L   +      P +  YT ++      G 
Sbjct: 411 MVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGE 470

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           LE A   FS +  KG++PNV TYN +I+GLC+   + +A  LF +M + G  PN  TY +
Sbjct: 471 LEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNL 530

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
           +             + L +EML R    D  T + LL+  L  D
Sbjct: 531 ITRGFLRNNEALRTIELLEEMLARGFSVDVST-TTLLVGMLSDD 573



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 248/484 (51%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PS V +N +L S  K       L L  +M   G  P+  T  ++I        ++ A   
Sbjct: 68  PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSA 127

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  +LKLG +  A ++  +I G   +G + EAL+L ++M+  G  P + TY  LI GLCK
Sbjct: 128 LAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK 187

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G  S A      M + N  P+++ ++TL+   C+   + EAF +F E+ ++ + P +VT
Sbjct: 188 VGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVT 247

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YN+LI GLC+  + +    L   M++  I+PDV T   +V+  CK G ++ A +  + M+
Sbjct: 248 YNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMI 307

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            +G++P+   Y   + G     +   A ++ + M+ K    ++I+YN L++G CK+ S++
Sbjct: 308 HRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVD 367

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           +A  L  +M      P+ +TY ++IH    +G L+    LF+ M+ +G  P LVTY  L 
Sbjct: 368 KAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLS 427

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                   L+ A      ++     P++  Y  +++G+CR   ++ A  LF ++  +G+ 
Sbjct: 428 DYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQ 487

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
           PN +TY I+I+  C  G   EA +L+ EM      P+ CT++ +    L  +  +  +E 
Sbjct: 488 PNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIEL 547

Query: 721 LESL 724
           LE +
Sbjct: 548 LEEM 551



 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 126/369 (34%), Positives = 199/369 (53%), Gaps = 6/369 (1%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF---GIKP 241
           K   V +   +F++M+  G+ P++   N +I  L       + + V  +M E     I P
Sbjct: 222 KDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCK---LCEWKHVTTLMNEMVDSKIMP 278

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
            + T NT++D+ CKEG + EA +++  M  RG  PN VTYN L+ G     E++ A  + 
Sbjct: 279 DVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVF 338

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
             M+      +  SYN +I GY +   + +A+ L EEM  + + P   TYN LI+GLC  
Sbjct: 339 DTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHV 398

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           GR+ DA   F EM+ +  IPD+++Y TL    C++ ++ +A  L   +   N  P +  Y
Sbjct: 399 GRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIY 458

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
            T++DG+CR G+LE A+ L  N+ ++G+ P+V TY IM++G CK G L+ A + F+EM +
Sbjct: 459 TTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNK 518

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
            G  P+   Y     G L+  +      L EEMLA+GF  D+ T  +LV  L   G  + 
Sbjct: 519 NGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQS 578

Query: 542 ANELLRKMV 550
             ++L K+V
Sbjct: 579 VKQILCKIV 587


>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
          Length = 948

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 158/506 (31%), Positives = 257/506 (50%), Gaps = 5/506 (0%)

Query: 201 RNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR-MMGEFGIKPSIVTYNTMLDSFCKEGEM 259
           R G+ P  ++ N ++ VL        A  +YR M+    + P+  T+     + C+ G  
Sbjct: 132 RFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRA 191

Query: 260 QEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI 319
            EAL LL  M   GC P+ V Y  +I      G + +A  L+ +ML +G     ++++ +
Sbjct: 192 NEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDV 251

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           + G    G + EA  L + M+T+G  P + TY  L+ GLC+  +  +AR     ML +  
Sbjct: 252 VRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEAR----AMLGRVP 307

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
             +++ +NT++ G    G + EA  L++ +  +   P   TY+ L+ GLC+ G +  A +
Sbjct: 308 ELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVR 367

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           L   M  +G  P+V+TYTI+++  CK G     R    EM  KGL  +   Y   I    
Sbjct: 368 LLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALC 427

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           K G   EA  L +EM ++G  PD+ +YN +++ LC    +EEA  +   ++ +G + + I
Sbjct: 428 KDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGI 487

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
           TY +IIHA L  G  +    L   M+  G S  +V+Y  LI A    G ++ + +   EM
Sbjct: 488 TYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEM 547

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
             KGI+PN ++YN LI+ LC+ RR+  A  L   M  +G+ P+  TY  LIN  C  G  
Sbjct: 548 AEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWM 607

Query: 680 QEALRLYKEMLDREIEPDYCTHSALL 705
             AL L +++ +  + PD  T++ L+
Sbjct: 608 HAALNLLEKLHNENVHPDIITYNILI 633



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 157/489 (32%), Positives = 244/489 (49%), Gaps = 5/489 (1%)

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG-CSPNGVTYNVLITGFSRNGELE 295
           FG++PS  +YN +L    +     +AL L   M  R    P   T+ V      R G   
Sbjct: 133 FGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRAN 192

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
           +A  L+R M + G    A  Y  +I    ++G + EA  L  EM+  G A  + T++ ++
Sbjct: 193 EALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVV 252

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
            G+C  GRV +A      M+ K  +P +++Y  LL G CR     EA  +   +   N  
Sbjct: 253 RGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELN-- 310

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
             VV +NT+I G    G L  A +L E M  +G  PD  TY+I+++G CK+G +S A   
Sbjct: 311 --VVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRL 368

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
             EM +KG  P+   YT  +    K G   +   L EEM AKG   +   YN +++ LCK
Sbjct: 369 LREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCK 428

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
            G ++EA  L+++M   G  PD  +Y +II+       +     +F N+L +G+    +T
Sbjct: 429 DGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGIT 488

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           Y  +IHA    GR + A     EM + G   +V++YN LI  +C+   +D++  L  +M 
Sbjct: 489 YNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMA 548

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKV 715
           E+GI PN  +Y ILI+E C     ++AL L K+ML++ + PD  T++ L+       +  
Sbjct: 549 EKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMH 608

Query: 716 HAVEYLESL 724
            A+  LE L
Sbjct: 609 AALNLLEKL 617



 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 136/461 (29%), Positives = 238/461 (51%), Gaps = 4/461 (0%)

Query: 191 QCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTML 250
           + L +   M R+G +PD      +I  L D G   +A  +   M   G    + T++ ++
Sbjct: 193 EALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVV 252

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
              C  G ++EA  L+  M  +GC P  +TY  L+ G  R  + ++AR ++  + +L + 
Sbjct: 253 RGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVV 312

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
           +    +N +I G   +G L EA  L E M  +G  P   TY+IL++GLCK GR+S A   
Sbjct: 313 L----FNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRL 368

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
             EM +K   P++++Y  +L+ +C++G   +   L +E+ ++ L      YN +I  LC+
Sbjct: 369 LREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCK 428

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
            G ++ A  L + M +QG  PD+ +Y  ++   C    +  A   F  +L +G+  +   
Sbjct: 429 DGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGIT 488

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           Y T I   L+ G   +A RL +EM+  G   D+++YN L+  +CK G+++ +  LL +M 
Sbjct: 489 YNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMA 548

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
             G  P++++Y  +I    +   +R   +L   ML +GL+P +VTY  LI+     G + 
Sbjct: 549 EKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMH 608

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
            A     ++  + + P++ITYN LI+  C++R +D A  L 
Sbjct: 609 AALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLL 649



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 113/340 (33%), Positives = 187/340 (55%)

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
           N +I      G   +A E+Y  MG  G +P   TY+ ++   CK G +  A+ LL EM+ 
Sbjct: 315 NTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEK 374

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
           +G +PN VTY +++  F +NG  +  R L+ +M   GL +++  YN +I    + G + E
Sbjct: 375 KGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDE 434

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
           A+ L +EM ++G  P + +YN +IY LC   ++ +A H F  +L + V+ + I+YNT+++
Sbjct: 435 AMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIH 494

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
              R G   +A  L  E+        VV+YN LI  +C+ G+++ +  L E M  +GI P
Sbjct: 495 ALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKP 554

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           + ++Y I+++  CK   +  A E   +ML +GL PD   Y T I G  K+G    A  L 
Sbjct: 555 NNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLL 614

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
           E++  +   PD+ITYN+L+   CK+  L++A  LL + + 
Sbjct: 615 EKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMA 654



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 134/440 (30%), Positives = 213/440 (48%), Gaps = 34/440 (7%)

Query: 159 LDVLIGGGLSSCVSIKIL-DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
           L +L G     CV   +L   ++     +  V +   + N+ML  G   DV   + +++ 
Sbjct: 195 LALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRG 254

Query: 218 LRDNG-FSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK--------------------- 255
           +   G     AR V RMM + G  P ++TY  +L   C+                     
Sbjct: 255 MCGLGRVREAARLVDRMMTK-GCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVL 313

Query: 256 ----------EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
                     EG++ EA EL   M  +GC P+  TY++L+ G  + G +  A  L+R+M 
Sbjct: 314 FNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREME 373

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
           K G   +  +Y  ++  + + G+  +   L EEM  +G+      YN +IY LCK GR+ 
Sbjct: 374 KKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMD 433

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
           +A     EM  +   PDI SYNT++Y  C +  + EA  +F+ L    +V   +TYNT+I
Sbjct: 434 EAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTII 493

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
             L R G  + A +L + MI  G   DV++Y  ++   CK GN+  +     EM  KG++
Sbjct: 494 HALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIK 553

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           P+  +Y   I+   K     +A  L ++ML +G  PD++TYN L++GLCK+G +  A  L
Sbjct: 554 PNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNL 613

Query: 546 LRKMVGDGFIPDHITYTSII 565
           L K+  +   PD ITY  +I
Sbjct: 614 LEKLHNENVHPDIITYNILI 633



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 161/316 (50%), Gaps = 1/316 (0%)

Query: 166 GLSSC-VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS 224
           GL  C        +L+    K   +   + +  +M + G  P+V     ++     NG  
Sbjct: 338 GLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMW 397

Query: 225 VKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVL 284
              R +   M   G+  +   YN M+ + CK+G M EA+ L+ EM+ +GC+P+  +YN +
Sbjct: 398 DDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTI 457

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           I     N ++E+A  +  ++L+ G+  +  +YN II      G   +A+ L +EM+  G 
Sbjct: 458 IYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGC 517

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
           +  + +YN LI  +CK G V  +     EM  K + P+ +SYN L+   C+   + +A  
Sbjct: 518 SLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALE 577

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
           L  ++ ++ L P +VTYNTLI+GLC+ G +  A  L E + N+ + PD+ITY I+++  C
Sbjct: 578 LSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHC 637

Query: 465 KMGNLSMAREFFNEML 480
           K+  L  A    N  +
Sbjct: 638 KVRLLDDAAMLLNRAM 653



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 16/171 (9%)

Query: 117 QPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGI-LDVLIGGGLSSCVSIKI 175
           + GV  +   + TI+  L+  G  + A  + + ++   +HG  LDV+   GL     IK 
Sbjct: 479 EEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMI---LHGCSLDVVSYNGL-----IKA 530

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
           +        K   V++ L++  +M   G+ P+  + N +I  L        A E+ + M 
Sbjct: 531 M-------CKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQML 583

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
             G+ P IVTYNT+++  CK G M  AL LL ++      P+ +TYN+LI+
Sbjct: 584 NQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILIS 634


>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
 gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
          Length = 628

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 158/521 (30%), Positives = 262/521 (50%), Gaps = 8/521 (1%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +  KM   G  P+V     +I  L        A +  + M   G +P +VTYN+++   C
Sbjct: 32  LLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLC 91

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
               M +A  +L E+   G +PN +TY+ L+    R   L+QARGLIR+M+  G   +  
Sbjct: 92  MANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRRRRLDQARGLIREMILRGSVCNLV 151

Query: 315 SYNPIICGYSEKGLLVEALNLEE--EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
            Y   I G+ E           +  EM+  G  P + TYN  I GLCK G++        
Sbjct: 152 VYIDCIFGFCEARCQSSRYECRDGDEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLE 211

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
           EM R  + PD++++ +++ G C++  I +AF +F  +  R  VP  +TY+ ++D L R  
Sbjct: 212 EMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRAN 271

Query: 433 DLEVAQQLKENM--INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
            L+   ++ E+M  +  G + +V T+   +   C+ G   +A+     M+  G  P+  +
Sbjct: 272 RLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLS 331

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGF-PPDLITYNVLVHGLCKLGSLEEANELLRKM 549
           Y   I G  K G+  +A++L  +ML  G   PD+I +N L+ G CK G L +A++LL +M
Sbjct: 332 YNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEM 391

Query: 550 VGDGF-IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
                 +PD +TY ++I    + G L++ + L   M   G  P +VTY  LI+ +A  G 
Sbjct: 392 KAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGM 451

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG--ILPNKYTY 666
            E A   F EM  KG  P++ITYN +++   +   + +A G++  ++ +     P+  TY
Sbjct: 452 YEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITY 511

Query: 667 TILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLK 707
            ILI+  C A + ++ L L +EM  R    D  T++ L+ K
Sbjct: 512 RILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAK 552



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 159/534 (29%), Positives = 255/534 (47%), Gaps = 45/534 (8%)

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M   G   S+VTY T++D  CK G++  A  LL +M   GC+PN VTY  LI G  +   
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
              A   ++ ML+ G +    +YN +I G      + +A  + +E+V  G AP   TY+ 
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL--FDELRS 411
           L+   C+  R+  AR    EM+ +  + +++ Y   ++G+C +      +     DE+  
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIE 180

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
              +P VVTYNT I GLC+ G L+   ++ E M   GI PDV+T+  +++G CK   +  
Sbjct: 181 SGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDD 240

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAG------------------ELKLGDTSEAYRLQE- 512
           A + F  ML +G  PD   Y+  +                     +K G   E Y     
Sbjct: 241 AFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAF 300

Query: 513 ------------------EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
                              M+  G  P+L++YN ++ GLCK G++++A +L RKM+  G 
Sbjct: 301 IGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGC 360

Query: 555 I-PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS-PTLVTYTVLIHAHAARGRLELA 612
             PD I + ++I    + G L +   L   M  K +  P +VTY  LI   +  G L+ A
Sbjct: 361 CKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQA 420

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
            +   EMQ  G +PNV+TY ALING  +    ++A  LF +M  +G  P+  TY  +++ 
Sbjct: 421 KLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSA 480

Query: 673 NCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
              AG   +A  +Y+++ ++     YC+  A+  + L   Y   A +  + LTL
Sbjct: 481 FSKAGMMSKAEGVYQQLKNK---TSYCSPDAITYRILIDGY-CRAEDTEQGLTL 530



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 137/434 (31%), Positives = 219/434 (50%), Gaps = 7/434 (1%)

Query: 197 NKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKE 256
           ++M+ +G +PDV   N  I  L   G   K  E+   M   GI P +VT+ +++   CK 
Sbjct: 176 DEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKA 235

Query: 257 GEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM--LKLGLKVSAH 314
             + +A ++   M  RGC P+ +TY++++   SR   L+    ++  M  +K G  +  +
Sbjct: 236 NRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVY 295

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           ++N  I      G    A N+   M+  G  P L +YN +I GLCK G V DA     +M
Sbjct: 296 THNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKM 355

Query: 375 LRKNVI-PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL-VPTVVTYNTLIDGLCRYG 432
           L      PD+I +NTL+ G+C++G + +A  L  E++++N+ VP VVTYNTLIDG  ++G
Sbjct: 356 LDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFG 415

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
            L+ A+ L + M   G  P+V+TY  ++NG  K G    A   F+EM  KG  PD   Y 
Sbjct: 416 SLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYN 475

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKG--FPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           T ++   K G  S+A  + +++  K     PD ITY +L+ G C+    E+   LL++M 
Sbjct: 476 TVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMT 535

Query: 551 GDGFIPDHITYTSIIHASLEMGDL-RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRL 609
             G+  D  TY  +I    E  ++  +   ++  ML +   P+   +  L+      G +
Sbjct: 536 ARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDV 595

Query: 610 ELAFMYFSEMQVKG 623
             A     EM  KG
Sbjct: 596 NSARSMVQEMNEKG 609



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 137/450 (30%), Positives = 220/450 (48%), Gaps = 7/450 (1%)

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M E G  P +VTYNT +   CK G++ + LE+L EM   G  P+ VT+  +I+G  +   
Sbjct: 178 MIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANR 237

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM--VTRGVAPTLATY 351
           ++ A  + + ML+ G    + +Y+ ++   S    L     + E M  +  G    + T+
Sbjct: 238 IDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTH 297

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDE-LR 410
           N  I  LC+ G+   A++    M+    +P+++SYN ++ G C+SGN+ +A+ L  + L 
Sbjct: 298 NAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLD 357

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI-LPDVITYTIMVNGSCKMGNL 469
           S    P V+ +NTLI G C+ G L  A QL   M  + I +PDV+TY  +++G  K G+L
Sbjct: 358 SGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSL 417

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A+    EM   G +P+   Y   I G  K G   EA  L +EM AKG  PD+ITYN +
Sbjct: 418 KQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTV 477

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFI--PDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
           +    K G + +A  + +++        PD ITY  +I       D  +G  L   M  +
Sbjct: 478 LSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTAR 537

Query: 588 GLSPTLVTYTVLIHAHAARGRL-ELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
           G S    TY VLI   A    +   A   + +M  +   P+   +N+L+    R   ++ 
Sbjct: 538 GWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNS 597

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNA 676
           A  +  +M E+G L +      L  E+ +A
Sbjct: 598 ARSMVQEMNEKGHLVDASNLEALNKESNDA 627



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 130/414 (31%), Positives = 206/414 (49%), Gaps = 13/414 (3%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   +++ L +  +M R G+ PDV     II  L        A +V++ M E G  P  +
Sbjct: 199 KAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSL 258

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQG--RGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           TY+ MLD+  +   +    E+L  MQ    GC     T+N  I    R+G+   A+ ++ 
Sbjct: 259 TYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFPLAKNILL 318

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA-PTLATYNILIYGLCKW 361
            M++ G   +  SYN +I G  + G + +A  L  +M+  G   P +  +N LI G CK 
Sbjct: 319 GMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKA 378

Query: 362 GRVSDARHRFFEMLRKNV-IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
           GR+S A     EM  KN+ +PD+++YNTL+ G  + G++ +A LL  E+++    P VVT
Sbjct: 379 GRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVT 438

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y  LI+G  ++G  E A+ L + M  +G  PD+ITY  +++   K G +S A   + ++ 
Sbjct: 439 YAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLK 498

Query: 481 RKG--LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
            K     PD   Y   I G  +  DT +   L +EM A+G+  D  TYNVL+    KL  
Sbjct: 499 NKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIA---KLAE 555

Query: 539 LEE----ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
            EE    A  + ++M+    +P    + S++   L  GD+   R +   M  KG
Sbjct: 556 TEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQEMNEKG 609



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 152/292 (52%), Gaps = 11/292 (3%)

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           M   G    V+TYT +++G CK G+L  A+    +M   G  P+   YT  I G  K   
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
             +A +  + ML  G  PDL+TYN L+HGLC    +++A  +L+++V +GF P+HITY++
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI----HAHAARGRLELAFMYFSEM 619
           ++  +     L + R L   M+ +G    LV Y   I     A     R E       EM
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYEC--RDGDEM 178

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
              G  P+V+TYN  I+GLC+  ++D+   +  +M+  GI P+  T+  +I+  C A   
Sbjct: 179 IESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRI 238

Query: 680 QEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAV----EYLESLTLG 727
            +A +++K ML+R   PD  T+S ++L  L +  ++  V    E+++++  G
Sbjct: 239 DDAFQVFKGMLERGCVPDSLTYS-IMLDNLSRANRLDTVDEVLEHMQAMKAG 289



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 148/295 (50%), Gaps = 40/295 (13%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGI-KPSIVTYNTMLDSFCKEG 257
           M+ +G LP++ + N +I  L  +G    A ++ R M + G  KP ++ +NT++  FCK G
Sbjct: 320 MIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAG 379

Query: 258 EMQEALELLWEMQGRG-CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSY 316
            + +A +LL EM+ +  C P+ VTYN LI G S+ G L+QA+ L+++M  +G K +  +Y
Sbjct: 380 RLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTY 439

Query: 317 NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
             +I GY++ G+  EA +L +EM  +G  P + TYN ++    K G +S A   + ++  
Sbjct: 440 AALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKN 499

Query: 377 KN--VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR---------------------- 412
           K     PD I+Y  L+ GYCR+ +  +   L  E+ +R                      
Sbjct: 500 KTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAKLAETEEV 559

Query: 413 --------------NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
                         + VP+   +N+L+    R GD+  A+ + + M  +G L D 
Sbjct: 560 PSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQEMNEKGHLVDA 614



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 104/202 (51%), Gaps = 3/202 (1%)

Query: 184 TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
           +K   ++Q  L+  +M   G  P+V     +I     +G   +A  ++  M   G  P I
Sbjct: 412 SKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDI 471

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRG--CSPNGVTYNVLITGFSRNGELEQARGLI 301
           +TYNT+L +F K G M +A  +  +++ +   CSP+ +TY +LI G+ R  + EQ   L+
Sbjct: 472 ITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLL 531

Query: 302 RDMLKLGLKVSAHSYNPIICGYSE-KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           ++M   G    +++YN +I   +E + +  +AL + ++M+ +   P+ + +N L+    +
Sbjct: 532 QEMTARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLR 591

Query: 361 WGRVSDARHRFFEMLRKNVIPD 382
            G V+ AR    EM  K  + D
Sbjct: 592 TGDVNSARSMVQEMNEKGHLVD 613



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 78/164 (47%), Gaps = 3/164 (1%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG--IK 240
           Y K  M E+   +F++M   G  PD+   N ++      G   KA  VY+ +        
Sbjct: 446 YAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCS 505

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL-EQARG 299
           P  +TY  ++D +C+  + ++ L LL EM  RG S +  TYNVLI   +   E+  +A  
Sbjct: 506 PDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAKLAETEEVPSKALA 565

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG 343
           + + ML      SA  +N ++  +   G +  A ++ +EM  +G
Sbjct: 566 VYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQEMNEKG 609


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 157/541 (29%), Positives = 270/541 (49%), Gaps = 6/541 (1%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL+   K +M    +  ++++LR GL P++   N +I  L  +G    A  +   + + G
Sbjct: 199 LLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSG 258

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           +KP   TY +M+  +C+  ++  A E+   M   GC PN  TY+ LI G   +G + +A 
Sbjct: 259 MKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEAL 318

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
             I +M + G+  + H++   I    + G + +A  +  +M  +G  P + TY  LI G 
Sbjct: 319 DFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG- 377

Query: 359 CKWGRVSD-ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
               RVS  A   F  M R  V+P+ ++YN L+     +  I  A ++F+ +     +P 
Sbjct: 378 ---QRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPN 434

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
             +YN LI G C  GD E A  +  NM+     P ++TY I++ G C  G+  +A     
Sbjct: 435 TSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLE 494

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            M   G QPD ++YT  I+G  K+     A  +  EM+ +G  P+ +TY  L+ G CK  
Sbjct: 495 LMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDE 554

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            L+ A  +L +M   G  P+  TY  +IH   +  +     +L   ML + +SP +VTY+
Sbjct: 555 KLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYS 614

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
            +I+     G + LA   F++M   G  PN+ TY++LI  L +  R+++A  +F +++++
Sbjct: 615 TVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQ 674

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHA 717
           G++P++ TY  +I     +G    A     EM++   +P   T+  +L+K L  +   H 
Sbjct: 675 GLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYD-VLIKGLQNEMVYHK 733

Query: 718 V 718
           +
Sbjct: 734 L 734



 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 156/511 (30%), Positives = 246/511 (48%), Gaps = 6/511 (1%)

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
           +IK   +     +A     M  + G K  + TY T+L    K       ++   ++   G
Sbjct: 164 MIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREG 223

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
             PN + YN +I    ++G +  A  +I  + K G+K    +Y  +I GY     L  A 
Sbjct: 224 LQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAF 283

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
            +   M   G  P  ATY+ LI GLC  GRV++A     EM R  V+P + ++   +   
Sbjct: 284 EIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVAL 343

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
           C  G I +A+ +F +++ +   P V TY +LI G  R   + +   L   M   G++P+ 
Sbjct: 344 CDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQ-RVSRMAIG--LFHRMSRDGVVPNT 400

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
           +TY  ++N   +   +  A   FN M + G  P+  +Y   I G   +GDT +A  +   
Sbjct: 401 VTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTN 460

Query: 514 MLAKGFP-PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           ML KG P P L+TYN+++ G C  G  + A  +L  M  +G  PD  +YT +I    ++ 
Sbjct: 461 ML-KGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKIS 519

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
            +     +FN M+ +GL P  VTYT LI  +    +L+ A      M+  G RPNV TYN
Sbjct: 520 KMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYN 579

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
            LI+GL +      A  L   M EE I P+  TY+ +IN  CN G    AL ++ +M+  
Sbjct: 580 VLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKH 639

Query: 693 EIEPDYCTHSALLLKQLDKDYKVHAVEYLES 723
              P+  T+S+ L++ L ++ +V   E + S
Sbjct: 640 GCLPNLHTYSS-LIQALGQEGRVEEAEEMFS 669



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 165/591 (27%), Positives = 257/591 (43%), Gaps = 62/591 (10%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V + L   ++M R+G+LP V      I  L D G    A +++  M + G KP++ TY +
Sbjct: 314 VNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTS 373

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++     +   + A+ L   M   G  PN VTYN L+     N E++ A  +   M K G
Sbjct: 374 LISG---QRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHG 430

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
              +  SYN +I GY   G   +A+++   M+     PTL TYNI+I G C  G  +D  
Sbjct: 431 CLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGD-TDVA 489

Query: 369 HRFFEMLRKN-VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
            R  E+++ N   PD  SY  L+ G+C+   +  A  +F+E+  R L P  VTY  LI G
Sbjct: 490 IRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISG 549

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
            C+   L+ A ++ E M   G  P+V TY ++++G  K  N S A E    ML + + PD
Sbjct: 550 YCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPD 609

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              Y+T I G    G    A  +  +M+  G  P+L TY+ L+  L + G +EEA E+  
Sbjct: 610 VVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFS 669

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR--------------KGLSPTL 593
           ++   G IPD +TY  +I   +  G + R  D    M+               KGL   +
Sbjct: 670 ELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEM 729

Query: 594 VTYTVLIHAHAAR-------------------------------------------GRLE 610
           V + ++   +AA                                            GR  
Sbjct: 730 VYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWF 789

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
            A   +  M  +   PN  TY   +  L R  ++D A  +F  M ++    +   Y  LI
Sbjct: 790 EANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELI 849

Query: 671 NENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYL 721
              C     +EA  ++++ML R +  D    + L+   L   YK   +E+L
Sbjct: 850 CTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAGYKDLCMEFL 900



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 141/510 (27%), Positives = 236/510 (46%), Gaps = 30/510 (5%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           ++  L+VFN M ++G LP+  + N +I+     G + KA  +   M +    P++VTYN 
Sbjct: 416 IDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNI 475

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++  +C  G+   A+ +L  M+  GC P+  +Y  LI+GF +  ++E A G+  +M+  G
Sbjct: 476 IIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRG 535

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           L  +  +Y  +I GY +   L  A  + E M   G  P + TYN+LI+GL K    S A 
Sbjct: 536 LCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAE 595

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
                ML + + PD+++Y+T++ G C +G I  A  +F+++     +P + TY++LI  L
Sbjct: 596 ELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQAL 655

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
            + G +E A+++   +  QG++PD +TY  M+      G +  A +F  EM+  G QP  
Sbjct: 656 GQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTL 715

Query: 489 FAYTTQIAGE---------LKLGDTSEAYRLQEEMLAKGFPPDLIT-------------- 525
             Y   I G          + L + +      ++++ K    D+I+              
Sbjct: 716 QTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINK----DVISVLSSKLAELDFELS 771

Query: 526 ---YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
              Y+ L+  L + G   EAN L R MV     P+  TY   + + L    +    D+F 
Sbjct: 772 RQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFK 831

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
           +M  +     L  Y  LI       R + A   F +M  + +  + I +  LINGL    
Sbjct: 832 HMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAG 891

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINE 672
             D        ME     P+ +  TIL  E
Sbjct: 892 YKDLCMEFLHIMETNRRNPSSHARTILARE 921



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 167/369 (45%), Gaps = 26/369 (7%)

Query: 157 GILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK 216
           G+ + ++  GL  C +      L+  Y K   ++    +  +M R+G  P+V+  N +I 
Sbjct: 526 GMFNEMMDRGL--CPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIH 583

Query: 217 VL-RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCS 275
            L + N FS  A E+ ++M E  I P +VTY+T+++  C  G +  ALE+  +M   GC 
Sbjct: 584 GLTKQNNFS-GAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCL 642

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           PN  TY+ LI    + G +E+A  +  ++ K GL     +Y  +I      G +  A + 
Sbjct: 643 PNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDF 702

Query: 336 EEEMVTRGVAPTLATYNILIYGL---------CKWGRVSDARHRFFEMLRKNVIPDIIS- 385
             EM+  G  PTL TY++LI GL               +       +++ K+VI  + S 
Sbjct: 703 LGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSK 762

Query: 386 ------------YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
                       Y+ LL    RSG   EA  L+  + S++  P   TY   +  L R   
Sbjct: 763 LAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALK 822

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           +++A  + ++M +Q     +  Y  ++   C++     AR  F +ML + L  D   +T 
Sbjct: 823 VDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTI 882

Query: 494 QIAGELKLG 502
            I G L  G
Sbjct: 883 LINGLLGAG 891


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 151/520 (29%), Positives = 266/520 (51%), Gaps = 5/520 (0%)

Query: 205 LPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALE 264
           LP + +CN +++ L   G     R  + ++   G +P    +N  + +    G++ EAL 
Sbjct: 120 LPSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALA 179

Query: 265 LLWEMQGR---GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC 321
           +L  M GR      P+  +YNV+I G  R+G+   A  +  +M+  G+  +  +YN +I 
Sbjct: 180 MLRRM-GRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMID 238

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           G+ + G L     L ++M+  G  P + TYN+L+ GLC+ GR+ + R    EM   +++P
Sbjct: 239 GHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLP 298

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           D  +Y+ L  G  R+G+      LF E   + ++    T + L++GLC+ G +  A+Q+ 
Sbjct: 299 DGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVL 358

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
           E +++ G++P    Y  ++NG C++ +L  A   F +M  + ++PD   Y   I G  K+
Sbjct: 359 EMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKM 418

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
              +EA  L  EM   G  P + T+N L+    + G LE+   +L  M   G   + I++
Sbjct: 419 EMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISF 478

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
            S++ A  + G +     + ++M+ K + P    Y  +I A+   G  E AF+   +M+ 
Sbjct: 479 GSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKS 538

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
            G+  ++ TYN L+ GLC+  +ID+A  L  ++  +G+ P+  +Y  +I+  CN G+   
Sbjct: 539 SGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDR 598

Query: 682 ALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYL 721
           AL L +EM   +I P   T+   LL  L    +VH +E L
Sbjct: 599 ALELLQEMHKYDIRPTLRTYHP-LLSALGSAGRVHDMECL 637



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 152/504 (30%), Positives = 249/504 (49%), Gaps = 2/504 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG--EFGIKPSIVTYNTMLDS 252
            F  ++  G  PD    N+ ++     G   +A  + R MG  E    P   +YN ++  
Sbjct: 145 AFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAG 204

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
             + G+  +AL++  EM  RG +PN +TYN +I G  + G+LE    L   ML+ G K +
Sbjct: 205 LWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPN 264

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
             +YN ++ G    G + E   L +EM +  + P   TY+IL  GL + G        F 
Sbjct: 265 VVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFG 324

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
           E L+K VI    + + LL G C+ G + +A  + + L    LVPT   YNTLI+G C+  
Sbjct: 325 ESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVR 384

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
           DL+ A  + E M ++ I PD ITY  ++NG CKM  ++ A +   EM + G+ P    + 
Sbjct: 385 DLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFN 444

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
           T I    + G   + + +  +M  KG   ++I++  +V   CK G + EA  +L  M+  
Sbjct: 445 TLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHK 504

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
             +P+   Y SII A +E G   +   L   M   G+S ++ TY +L+       +++ A
Sbjct: 505 DVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEA 564

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
                 +  +G+RP+V++YN +I+  C     D+A  L  +M +  I P   TY  L++ 
Sbjct: 565 EELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSA 624

Query: 673 NCNAGNWQEALRLYKEMLDREIEP 696
             +AG   +   LY+ M+ + +EP
Sbjct: 625 LGSAGRVHDMECLYQHMVHKNVEP 648



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 146/467 (31%), Positives = 234/467 (50%), Gaps = 6/467 (1%)

Query: 193 LLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDS 252
           L VF++M+  G+ P+    N +I      G       +   M + G KP++VTYN +L  
Sbjct: 215 LKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSG 274

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
            C+ G M E   L+ EM      P+G TY++L  G +R G+      L  + LK G+ + 
Sbjct: 275 LCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIG 334

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
           A++ + ++ G  + G + +A  + E +V  G+ PT A YN LI G C+   +  A   F 
Sbjct: 335 AYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFE 394

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
           +M  +++ PD I+YN L+ G C+   I EA  L  E+    + P+V T+NTLID   R G
Sbjct: 395 QMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAG 454

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
            LE    +  +M ++GI  +VI++  +V   CK G +  A    ++M+ K + P+   Y 
Sbjct: 455 QLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYN 514

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
           + I   ++ G T +A+ L E+M + G    + TYN+L+ GLCK   ++EA EL+  +   
Sbjct: 515 SIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQ 574

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
           G  PD ++Y +II A    GD  R  +L   M +  + PTL TY  L+ A  + GR+   
Sbjct: 575 GLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDM 634

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
              +  M  K + P+   Y        R     +   L  +M E+GI
Sbjct: 635 ECLYQHMVHKNVEPSSSIYGT------RCENESKVASLKKEMSEKGI 675



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 88/336 (26%), Positives = 176/336 (52%), Gaps = 6/336 (1%)

Query: 158 ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
           +L++L+  GL    +I   + L+  Y +   ++    +F +M    + PD    N +I  
Sbjct: 357 VLEMLVHTGLVPTTAI--YNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALING 414

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
           L       +A ++   M + G+ PS+ T+NT++D++ + G++++   +L +MQ +G   N
Sbjct: 415 LCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSN 474

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
            +++  ++  F +NG++ +A  ++ DM+   +  +A  YN II  Y E G   +A  L E
Sbjct: 475 VISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVE 534

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
           +M + GV+ ++ TYN+L+ GLCK  ++ +A    + +  + + PD++SYNT++   C  G
Sbjct: 535 KMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKG 594

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
           +   A  L  E+   ++ PT+ TY+ L+  L   G +   + L ++M+++ + P    Y 
Sbjct: 595 DTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIYG 654

Query: 458 IMVNGSCKMGNLS--MARE--FFNEMLRKGLQPDRF 489
                  K+ +L   M+ +   F++  R  L+ DR 
Sbjct: 655 TRCENESKVASLKKEMSEKGIAFDDTERTNLELDRI 690


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 155/534 (29%), Positives = 271/534 (50%), Gaps = 34/534 (6%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIK-VLRDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
           V+  + +F  M+++   P +   N+++  V + N F +    +   M   GI   + TY+
Sbjct: 64  VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFEL-VISLGEQMQTLGISHDLYTYS 122

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
             ++ FC+  ++  AL +L +M   G  P+ VT + L+ G+  +  +  A  L+  M+++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           G K    ++  +I G        EA+ L ++MV RG  P L TY  ++ GLCK G +  A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
            +   +M    +  +++ +NT++   C+  ++  A  LF E+ ++ + P VVTYN+LI+ 
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           LC YG    A +L  NM+ + I P+V+T+  +++   K G L  A +   EM+++ + PD
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              Y   I G        EA ++ + M++K   P++ TYN L++G CK   +E+  EL R
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
           +M   G + + +TYT+II    + GD    + +F  M+   +   ++TY++L+H   + G
Sbjct: 423 EMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYG 482

Query: 608 RLELAFMYF-----SEMQVK---------------------------GIRPNVITYNALI 635
           +L+ A + F     SEM++                             I+P+V+TYN +I
Sbjct: 483 KLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMI 542

Query: 636 NGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           +GLC  R + +A  LF  M+E+G LPN  TY  LI  N    +   +  L KEM
Sbjct: 543 SGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEM 596



 Score =  256 bits (654), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 143/465 (30%), Positives = 246/465 (52%), Gaps = 3/465 (0%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PSIV +N +L +  K  + +  + L  +MQ  G S +  TY++ I  F R  +L  A  +
Sbjct: 81  PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  M+KLG +    + + ++ GY     + +A+ L ++MV  G  P   T+  LI+GL  
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
             + S+A     +M+++   PD+++Y T++ G C+ G+I  A  L +++ +  +   VV 
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           +NT+ID LC+Y  +EVA  L   M  +GI P+V+TY  ++N  C  G  S A    + ML
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            K + P+   +   I    K G   EA +L EEM+ +   PD ITYN+L++G C    L+
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA ++ + MV    +P+  TY ++I+   +   +  G +LF  M ++GL    VTYT +I
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                 G  + A M F +M    +  +++TY+ L++GLC   ++D A  +F  +++  + 
Sbjct: 441 QGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEME 500

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            N + Y  +I   C AG   EA  L+  +    I+PD  T++ ++
Sbjct: 501 LNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMI 542



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 148/496 (29%), Positives = 255/496 (51%), Gaps = 17/496 (3%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR-----EVYRMMGEF 237
           + ++S +   L V  KM++ G  PD+   + ++     NG+    R      +   M E 
Sbjct: 128 FCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLL-----NGYCHSKRISDAVALVDQMVEM 182

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G KP   T+ T++       +  EA+ L+ +M  RGC P+ VTY  ++ G  + G+++ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L+  M    +K +   +N II    +   +  A++L  EM T+G+ P + TYN LI  
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           LC +GR SDA      ML K + P+++++N L+  + + G + EA  L +E+  R++ P 
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
            +TYN LI+G C +  L+ A+Q+ + M+++  LP++ TY  ++NG CK   +    E F 
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           EM ++GL  +   YTT I G  + GD   A  + ++M++   P D++TY++L+HGLC  G
Sbjct: 423 EMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYG 482

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            L+ A  + + +       +   Y ++I    + G +    DLF ++    + P +VTY 
Sbjct: 483 KLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYN 539

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG--LFIDME 655
            +I    ++  L+ A   F +M+  G  PN  TYN LI     LR  D+A    L  +M 
Sbjct: 540 TMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA--NLRDCDRAASAELIKEMR 597

Query: 656 EEGILPNKYTYTILIN 671
             G + +  T +++ N
Sbjct: 598 SSGFVGDASTISLVTN 613



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 135/446 (30%), Positives = 222/446 (49%), Gaps = 6/446 (1%)

Query: 266 LWEMQGRGC------SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI 319
            + + G GC      S +G    +L    S   +++ A  L  DM+K     S   +N +
Sbjct: 30  FFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKL 89

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           +   ++       ++L E+M T G++  L TY+I I   C+  ++S A     +M++   
Sbjct: 90  LSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGY 149

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
            PDI++ ++LL GYC S  I +A  L D++      P   T+ TLI GL  +     A  
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA 209

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           L + M+ +G  PD++TY  +VNG CK G++ +A    N+M    ++ +   + T I    
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLC 269

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           K      A  L  EM  KG  P+++TYN L++ LC  G   +A+ LL  M+     P+ +
Sbjct: 270 KYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVV 329

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
           T+ ++I A  + G L     L   M+++ + P  +TY +LI+      RL+ A   F  M
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFM 389

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
             K   PN+ TYN LING C+ +R++    LF +M + G++ N  TYT +I     AG+ 
Sbjct: 390 VSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDC 449

Query: 680 QEALRLYKEMLDREIEPDYCTHSALL 705
             A  ++K+M+   +  D  T+S LL
Sbjct: 450 DSAQMVFKQMVSNRVPTDIMTYSILL 475



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/345 (31%), Positives = 179/345 (51%), Gaps = 3/345 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           VE  + +F +M   G+ P+V   N +I  L + G    A  +   M E  I P++VT+N 
Sbjct: 274 VEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNA 333

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++D+F KEG++ EA +L  EM  R   P+ +TYN+LI GF  +  L++A+ + + M+   
Sbjct: 334 LIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKD 393

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
              +  +YN +I G+ +   + + + L  EM  RG+     TY  +I G  + G    A+
Sbjct: 394 CLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQ 453

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F +M+   V  DI++Y+ LL+G C  G +  A ++F  L+   +   +  YNT+I+G+
Sbjct: 454 MVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGM 513

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G +  A  L     +  I PDV+TY  M++G C    L  A + F +M   G  P+ 
Sbjct: 514 CKAGKVGEAWDL---FCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNS 570

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
             Y T I   L+  D + +  L +EM + GF  D  T +++ + L
Sbjct: 571 GTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNML 615


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 143/448 (31%), Positives = 238/448 (53%), Gaps = 1/448 (0%)

Query: 247 NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
           N +L +F ++ + QEA +L        CSP+ +TY+ LI GF +  + +QA  L+ +M K
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
            G+      YN II G  + G +  AL    +M  R  AP++ TY IL+  LCK  R+SD
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRHCAPSVITYTILVDALCKSARISD 120

Query: 367 ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
           A     +M+     P++++YNTL+ G+C+ GN+ EA +LF+++   +  P V TYN LID
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILID 180

Query: 427 GLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
           G C+    +   +L + M+  G  P+ ITY  +++   K G    A      MLR+  +P
Sbjct: 181 GYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKP 240

Query: 487 DRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
             F +   I    K+G    AY L + M  +G  PD+ TYN+++ G C+   +++A +LL
Sbjct: 241 SHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLL 300

Query: 547 RKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAAR 606
            +M   G  PD +TY SI+    +   +    +++  +   G    +VT + LI      
Sbjct: 301 ERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKS 360

Query: 607 GRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
            RL+ A     EM+  G  P+V+ Y  LI+G C+  ++D++   F +M ++G +P   TY
Sbjct: 361 RRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITY 420

Query: 667 TILINENCNAGNWQEALRLYKEMLDREI 694
           +I+I++ C +   ++   L K ML+R +
Sbjct: 421 SIVIDKLCKSARVRDGCMLLKTMLERGV 448



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 144/454 (31%), Positives = 236/454 (51%), Gaps = 13/454 (2%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR---EVYRM 233
           + LL  + +K   ++   +F   L     PD    + +I     NGF  KAR   + YR+
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLI-----NGF-CKARDFQQAYRL 55

Query: 234 MGEF---GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
           + E    GI P    YNT++   C  G +  AL    +MQ R C+P+ +TY +L+    +
Sbjct: 56  LDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ-RHCAPSVITYTILVDALCK 114

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
           +  +  A  ++ DM++ G   +  +YN +I G+ + G + EA+ L  +M+    +P + T
Sbjct: 115 SARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFT 174

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           YNILI G CK  R  D      EM++    P+ I+YNTL+    +SG   +AF L   + 
Sbjct: 175 YNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMML 234

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
            R+  P+  T+N +ID  C+ G L++A +L + M ++G LPD+ TY IM++G+C+   + 
Sbjct: 235 RRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRID 294

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            AR+    M   G  PD   Y + ++G  K     EAY + E +   G+  D++T + L+
Sbjct: 295 DARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLI 354

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
            GLCK   L++A +LLR+M  +G  PD + YT +IH   +   L +    F+ ML KG  
Sbjct: 355 DGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCV 414

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
           PT++TY+++I       R+    M    M  +G+
Sbjct: 415 PTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/347 (32%), Positives = 178/347 (51%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           S+    +L+    K + +    L+   M+  G  P+V   N +I      G   +A  ++
Sbjct: 101 SVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLF 160

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M E    P + TYN ++D +CK+   Q+  +LL EM   GC PN +TYN L+    ++
Sbjct: 161 NQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKS 220

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G+   A  L + ML+   K S  ++N +I  + + G L  A  L + M  RG  P + TY
Sbjct: 221 GKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTY 280

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           NI+I G C+  R+ DAR     M      PD+++YN+++ G C++  + EA+ +++ LR+
Sbjct: 281 NIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRN 340

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
                 VVT +TLIDGLC+   L+ A++L   M   G  PDV+ YTI+++G CK   L  
Sbjct: 341 GGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDK 400

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           +  FF+EML KG  P    Y+  I    K     +   L + ML +G
Sbjct: 401 SLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG 447


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 193/690 (27%), Positives = 307/690 (44%), Gaps = 78/690 (11%)

Query: 92  LLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVV 151
           L+V VL+ ++  P + ++FF W   Q G      V+  +LE+L   G  R     +  + 
Sbjct: 131 LVVDVLSLVK-NPELGVKFFIWAGRQIGYGHTGPVYHALLEVLGCGGNDRVPEQFLREIR 189

Query: 152 CVNMHGILDVLIGGGLSSCVSIKILDLLL--LIYTKKSMVEQCLLVFNKMLRNGLLPDVK 209
             +   IL  L+   +  C    + ++ L  L   K    +   L +N ++R  L  D  
Sbjct: 190 DEDKE-ILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRL 248

Query: 210 NCNRII-KVLRDNGFSVKA----------------REVYRMMGEFGIKPSIVTYNTMLDS 252
           +   ++ + + D+GF++                  RE   ++ +   K   V Y  M+  
Sbjct: 249 DTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISG 308

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
            C+    +EA++ L  M+   C PN VTY +L+ G  R  +L + + ++  M+  G   S
Sbjct: 309 LCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPS 368

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG--------------- 357
              +N +I  Y   G    A  L ++M   G  P    YNILI G               
Sbjct: 369 RRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLEL 428

Query: 358 --------------------------LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
                                     LC  G+   A     EM+ K  IPD  +Y+ ++ 
Sbjct: 429 AEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIG 488

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
             C +  +  AFLLF+E++S ++VP V TY  LID  C+ G L+ A++  + M+  G  P
Sbjct: 489 LLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAP 548

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           +V+TYT +++   K   +S A E F  ML +G  P+   YT  I G  K G   +A ++ 
Sbjct: 549 NVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIY 608

Query: 512 EEMLAKGFPPD----------------LITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
             M      PD                + TY  LV GLCK   ++EA +LL  M  +G  
Sbjct: 609 ARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCE 668

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           P+HI Y ++I    ++G L   + +F  M  +G  P + TY+ LI       RL+LA   
Sbjct: 669 PNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKV 728

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
            S M      PNVI Y  +I+GLC++ + D+AY L   MEE+G  PN  TYT +I+    
Sbjct: 729 LSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGK 788

Query: 676 AGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           AG   + L L ++M  +   P++ T+  L+
Sbjct: 789 AGKVDKCLELMRQMGAKGCAPNFVTYRVLI 818



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 159/532 (29%), Positives = 261/532 (49%), Gaps = 32/532 (6%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRII--KVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + S+ E+ +   ++M  +  +P+V    RI+    LR      + + +  MM   G  PS
Sbjct: 311 EASLFEEAMDFLSRMRSSSCIPNVVT-YRILLCGCLRKRQLG-RCKRILSMMITEGCYPS 368

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL-------- 294
              +N+++ ++C+ G+   A +LL +M   GC P  V YN+LI G   N +L        
Sbjct: 369 RRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLEL 428

Query: 295 -EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
            E+A G + D   +  KV+  +    +CG    G   +A ++  EM+++G  P  +TY+ 
Sbjct: 429 AEKAYGEMLDAHVVLNKVNVSNLARCLCG---AGKFEKAYSIIREMMSKGFIPDTSTYSK 485

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           +I  LC   +V +A   F EM   +V+PD+ +Y  L+  +C+ G + +A   FDE+    
Sbjct: 486 VIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDG 545

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
             P VVTY  LI    +   +  A +L E M+++G +P+V+TYT +++G CK G +  A 
Sbjct: 546 CAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKAC 605

Query: 474 EFFNEMLRKGLQPDR----------------FAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
           + +  M      PD                 F Y   + G  K     EA  L + M  +
Sbjct: 606 QIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVE 665

Query: 518 GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
           G  P+ I Y+ L+ G CK+G L+EA  +  KM   G+ P+  TY+S+I    +   L   
Sbjct: 666 GCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLA 725

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
             + + ML    +P ++ YT +I      G+ + A+   S M+ KG  PNV+TY A+I+G
Sbjct: 726 LKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDG 785

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
             +  ++D+   L   M  +G  PN  TY +LIN  C AG   +A +L  EM
Sbjct: 786 FGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEM 837



 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 172/634 (27%), Positives = 283/634 (44%), Gaps = 66/634 (10%)

Query: 112 RWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCV 171
           RW E    ++++EF   T++   + SGL  ++ +             +D L     SSC+
Sbjct: 282 RWREALALIEKEEFKLDTVIYTQMISGLCEASLF----------EEAMDFLSRMRSSSCI 331

Query: 172 -SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV 230
            ++    +LL    +K  + +C  + + M+  G  P  +  N +I     +G    A ++
Sbjct: 332 PNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKL 391

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQ--EALELLWEMQGRGCSPNGVTYNVLITGF 288
            + MG+ G +P  V YN ++   C   ++   + LEL  +  G     + V   V ++  
Sbjct: 392 LKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNL 451

Query: 289 SR----NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           +R     G+ E+A  +IR+M+  G      +Y+ +I        +  A  L EEM +  V
Sbjct: 452 ARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHV 511

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
            P + TY ILI   CK G +  AR  F EM+R    P++++Y  L++ Y ++  +  A  
Sbjct: 512 VPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANE 571

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV----------- 453
           LF+ + S   +P VVTY  LIDG C+ G +E A Q+   M     +PDV           
Sbjct: 572 LFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNI 631

Query: 454 -----ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
                 TY  +V+G CK   +  AR+  + M  +G +P+   Y   I G  K+G   EA 
Sbjct: 632 RDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQ 691

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
            +  +M  +G+ P++ TY+ L+  L K   L+ A ++L +M+ +   P+ I YT +I   
Sbjct: 692 MVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGL 751

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
            ++G       L + M  KG  P +VTYT +I      G+++       +M  KG  PN 
Sbjct: 752 CKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNF 811

Query: 629 ITYNALINGLCRLRRIDQAY---------------------------------GLFIDME 655
           +TY  LIN  C    +D A+                                 GL  ++ 
Sbjct: 812 VTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIA 871

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           E   +P    Y ILI+  C AG  + AL L+K M
Sbjct: 872 ENVAVPIIPAYRILIDSFCKAGRLELALELHKXM 905



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 146/503 (29%), Positives = 239/503 (47%), Gaps = 26/503 (5%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           E+   +  +M+  G +PD    +++I +L +      A  ++  M    + P + TY  +
Sbjct: 462 EKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTIL 521

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           +DSFCK G +Q+A +   EM   GC+PN VTY  LI  + +  ++  A  L   ML  G 
Sbjct: 522 IDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGC 581

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA------------------PTLATY 351
             +  +Y  +I G+ + G + +A  +   M  RG A                  P + TY
Sbjct: 582 IPNVVTYTALIDGHCKSGQIEKACQIYARM--RGNADIPDVDMYFKIDDGNIRDPNIFTY 639

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
             L+ GLCK  +V +AR     M  +   P+ I Y+ L+ G+C+ G + EA ++F ++  
Sbjct: 640 GALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSE 699

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           R   P V TY++LID L +   L++A ++   M+     P+VI YT M++G CK+G    
Sbjct: 700 RGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDE 759

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A    + M  KG  P+   YT  I G  K G   +   L  +M AKG  P+ +TY VL++
Sbjct: 760 AYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLIN 819

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHIT-YTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
             C  G L++A++LL +M    + P H+  Y  +I        +  G  L + +      
Sbjct: 820 HCCAAGLLDDAHQLLDEM-KQTYWPKHMAGYRKVIEGFNREFIISLG--LLDEIAENVAV 876

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQ--VKGIRPNVITYNALINGLCRLRRIDQAY 648
           P +  Y +LI +    GRLELA      M         +   Y++LI  L    ++D+A+
Sbjct: 877 PIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIESLSLASKVDKAF 936

Query: 649 GLFIDMEEEGILPNKYTYTILIN 671
            L+ DM + G +P    +  L+ 
Sbjct: 937 ELYADMIKRGGIPELSIFFYLVK 959


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 155/524 (29%), Positives = 259/524 (49%), Gaps = 1/524 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +++ L  FN+ML     P   + NR++  +           + R M  FGI P + T   
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++S C    +  A   L ++   G  P+  T+  LI G    G++ +A  L   M+  G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            + +  +Y  +I G  + G    A+ L   M      P +  ++ LI  LCK  +V++A 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
           + F EM+ K + P+I++YN+L++G C+         L +E+    ++P V T NT++D L
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G +  A  + + MI++G+ P+V+TY  +++G C    + +A + F+ M+ K    + 
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANV 350

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
            +Y T I G  K+    +A  L EEM  +   P+ +TYN L+HGLC +G L++A  L  +
Sbjct: 351 ISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHE 410

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           MV  G IPD +TY ++     +   L +   L   +      P +  YT ++      G 
Sbjct: 411 MVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGE 470

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           LE A   FS +  KG++PNV TYN +I+GLC+   + +A  LF +M + G  PN  TY +
Sbjct: 471 LEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNL 530

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
           +             + L +EML R    D  T + LL+  L  D
Sbjct: 531 ITRGFLRNNEALRTIELLEEMLARGFSVDVST-TTLLVGMLSDD 573



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 248/484 (51%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PS V +N +L S  K       L L  +M   G  P+  T  ++I        ++ A   
Sbjct: 68  PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSA 127

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  +LKLG +  A ++  +I G   +G + EAL+L ++M+  G  P + TY  LI GLCK
Sbjct: 128 LAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK 187

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G  S A      M + N  P+++ ++TL+   C+   + EAF +F E+ ++ + P +VT
Sbjct: 188 VGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVT 247

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YN+LI GLC+  + +    L   M++  I+PDV T   +V+  CK G ++ A +  + M+
Sbjct: 248 YNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMI 307

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            +G++P+   Y   + G     +   A ++ + M+ K    ++I+YN L++G CK+ S++
Sbjct: 308 HRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVD 367

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           +A  L  +M      P+ +TY ++IH    +G L+    LF+ M+ +G  P LVTY  L 
Sbjct: 368 KAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLS 427

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                   L+ A      ++     P++  Y  +++G+CR   ++ A  LF ++  +G+ 
Sbjct: 428 DYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQ 487

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
           PN +TY I+I+  C  G   EA +L+ EM      P+ CT++ +    L  +  +  +E 
Sbjct: 488 PNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIEL 547

Query: 721 LESL 724
           LE +
Sbjct: 548 LEEM 551



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 126/369 (34%), Positives = 198/369 (53%), Gaps = 6/369 (1%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF---GIKP 241
           K   V +   +F++M+  G+ P++   N +I  L       + + V  +M E     I P
Sbjct: 222 KDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCK---LCEWKHVTTLMNEMVDSKIMP 278

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
            + T NT++D+ CKEG + EA +++  M  RG  PN VTYN L+ G     E++ A  + 
Sbjct: 279 DVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVF 338

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
             M+      +  SYN +I GY +   + +A+ L EEM  + + P   TYN LI+GLC  
Sbjct: 339 DTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHV 398

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           GR+ DA   F EM+ +  IPD+++Y TL    C++ ++ +A  L   +   N  P +  Y
Sbjct: 399 GRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIY 458

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
            T++DG+CR G+LE A+ L  N+ ++G+ P+V TY IM++G CK G L+ A + F+EM +
Sbjct: 459 TTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNK 518

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
            G  P+   Y     G L+  +      L EEMLA+GF  D+ T  +LV  L   G  + 
Sbjct: 519 NGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQS 578

Query: 542 ANELLRKMV 550
             ++L K V
Sbjct: 579 VKQILCKYV 587


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 154/508 (30%), Positives = 262/508 (51%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V+  + +FN++LR    P     N+I+  L  +        + + M   GIKP++V  N 
Sbjct: 66  VDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 125

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++ FC+ G +  A  +  ++   G  P+ +T+  LI G    G+++QA      ++ LG
Sbjct: 126 LINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALG 185

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
                 SY  +I G  + G    AL+L + +    V P +  YN +I  +CK   V++A 
Sbjct: 186 FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAF 245

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F EM+ K + PD+++Y+ L+ G+C  G + +A  LF+++   N+ P V T+N L++  
Sbjct: 246 DLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAF 305

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G ++  + + + M+ QGI P+ +TY  +++G C +  ++ A+  FN M + G+ PD 
Sbjct: 306 CKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDI 365

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
            +Y+  I G  K+    EA  L +EM  K   PD++TY+ L+ GL K G +  A +L+ +
Sbjct: 366 QSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQ 425

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M   G  P   TY SI+ A  ++  + +   L   +  KG+ P + TY++LI      G+
Sbjct: 426 MHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGK 485

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           LE A   F  + VKG   NV TY  +I G C     ++A  L   ME+ G +P+  TY I
Sbjct: 486 LEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEI 545

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEP 696
           +I           A +L +EM+ R + P
Sbjct: 546 IILSLFKKDENDMAEKLLREMIARGVRP 573



 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 145/471 (30%), Positives = 246/471 (52%)

Query: 193 LLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDS 252
           L +  KM   G+ P++ NCN +I      G    A  V+  + + G  P  +T+ T++  
Sbjct: 105 LYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKG 164

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
            C +G++Q+A     ++   G   + ++Y  LI G  + GE   A  L++ +    ++ +
Sbjct: 165 LCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPN 224

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
              YN II    +  L+ EA +L  EM+++G++P + TY+ LI G C  G+++DA   F 
Sbjct: 225 VVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFN 284

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
           +M+ +N+ PD+ ++N L+  +C+ G + E   +FD +  + + P  VTYN+L+DG C   
Sbjct: 285 KMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVK 344

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
           ++  A+ +   M   G+ PD+ +Y+IM+NG CK+     A   F EM RK + PD   Y+
Sbjct: 345 EVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYS 404

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
           + I G  K G  S A +L ++M  +G PP + TYN ++  LCK+  +++A  LL K+   
Sbjct: 405 SLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDK 464

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
           G  P+  TY+ +I    + G L   R +F  +L KG +  + TYT++I      G    A
Sbjct: 465 GIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEA 524

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
               S+M+  G  P+  TY  +I  L +    D A  L  +M   G+ P +
Sbjct: 525 LALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQ 575



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 148/472 (31%), Positives = 244/472 (51%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P    +N +L S  K       L L  +M+ RG  PN V  N+LI  F + G +  A  +
Sbjct: 83  PPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSV 142

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
              +LK+G      ++  +I G   KG + +A    +++V  G      +Y  LI+GLCK
Sbjct: 143 FAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCK 202

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G    A      +    V P+++ YNT++   C+   + EAF LF E+ S+ + P VVT
Sbjct: 203 VGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVT 262

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y+ LI G C  G L  A  L   MI + I PDV T+ I+VN  CK G +   +  F+ M+
Sbjct: 263 YSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMM 322

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           ++G++P+   Y + + G   + + ++A  +   M   G  PD+ +Y+++++G CK+   +
Sbjct: 323 KQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFD 382

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA  L ++M     IPD +TY+S+I    + G +     L + M  +G+ PT+ TY  ++
Sbjct: 383 EAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSIL 442

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
            A     +++ A    ++++ KGI+PN+ TY+ LI GLC+  +++ A  +F  +  +G  
Sbjct: 443 DALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHN 502

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
            N  TYTI+I   C  G + EAL L  +M D    PD  T+  ++L    KD
Sbjct: 503 LNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKD 554



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 126/429 (29%), Positives = 228/429 (53%)

Query: 277 NGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLE 336
           N ++Y+   T F  N +++ A  L   +L+      A  +N I+    +       L L 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 337 EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS 396
           ++M  RG+ P L   NILI   C+ G +  A   F ++L+   +PD I++ TL+ G C  
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLK 168

Query: 397 GNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
           G I +AFL  D++ +       ++Y TLI GLC+ G+   A  L + +    + P+V+ Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 457 TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA 516
             +++  CK+  ++ A + F+EM+ KG+ PD   Y+  I+G   LG  ++A  L  +M+ 
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMIL 288

Query: 517 KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
           +   PD+ T+N+LV+  CK G ++E   +   M+  G  P+ +TY S++     + ++ +
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNK 348

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
            + +FN M + G++P + +Y+++I+      + + A   F EM  K I P+V+TY++LI+
Sbjct: 349 AKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLID 408

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
           GL +  RI  A  L   M + G+ P   TY  +++  C      +A+ L  ++ D+ I+P
Sbjct: 409 GLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQP 468

Query: 697 DYCTHSALL 705
           +  T+S L+
Sbjct: 469 NMYTYSILI 477



 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 126/451 (27%), Positives = 238/451 (52%)

Query: 240 KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
           K + ++Y++   +F    ++ +A+ L   +  R  +P    +N ++    ++        
Sbjct: 47  KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLY 106

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
           L + M   G+K +  + N +I  + + GL+  A ++  +++  G  P   T+  LI GLC
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLC 166

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
             G++  A     +++      D ISY TL++G C+ G    A  L   +    + P VV
Sbjct: 167 LKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVV 226

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
            YNT+ID +C+   +  A  L   MI++GI PDV+TY+ +++G C +G L+ A + FN+M
Sbjct: 227 MYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKM 286

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
           + + ++PD + +   +    K G   E   + + M+ +G  P+ +TYN L+ G C +  +
Sbjct: 287 ILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEV 346

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
            +A  +   M   G  PD  +Y+ +I+   ++       +LF  M RK + P +VTY+ L
Sbjct: 347 NKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSL 406

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           I   +  GR+  A     +M  +G+ P + TYN++++ LC++ ++D+A  L   ++++GI
Sbjct: 407 IDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGI 466

Query: 660 LPNKYTYTILINENCNAGNWQEALRLYKEML 690
            PN YTY+ILI   C +G  ++A ++++ +L
Sbjct: 467 QPNMYTYSILIKGLCQSGKLEDARKVFEGLL 497



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 128/406 (31%), Positives = 218/406 (53%)

Query: 186 KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVT 245
           K  ++Q  L  +K++  G   D  +   +I  L   G +  A ++ + +    ++P++V 
Sbjct: 168 KGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVM 227

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           YNT++DS CK   + EA +L  EM  +G SP+ VTY+ LI+GF   G+L  A  L   M+
Sbjct: 228 YNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMI 287

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
              +K   +++N ++  + + G + E   + + M+ +G+ P   TYN L+ G C    V+
Sbjct: 288 LENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVN 347

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
            A+  F  M +  V PDI SY+ ++ G+C+     EA  LF E+  +N++P VVTY++LI
Sbjct: 348 KAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLI 407

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           DGL + G +  A QL + M ++G+ P + TY  +++  CK+  +  A     ++  KG+Q
Sbjct: 408 DGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQ 467

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           P+ + Y+  I G  + G   +A ++ E +L KG   ++ TY +++ G C  G   EA  L
Sbjct: 468 PNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALAL 527

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           L KM  +G IPD  TY  II +  +  +      L   M+ +G+ P
Sbjct: 528 LSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRP 573



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/454 (26%), Positives = 230/454 (50%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           ++L+  + +  ++     VF K+L+ G +PD      +IK L   G   +A   +  +  
Sbjct: 124 NILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVA 183

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G     ++Y T++   CK GE + AL+LL  + G    PN V YN +I    +   + +
Sbjct: 184 LGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNE 243

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  L  +M+  G+     +Y+ +I G+   G L +A++L  +M+   + P + T+NIL+ 
Sbjct: 244 AFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVN 303

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
             CK G++ + +  F  M+++ + P+ ++YN+L+ GYC    + +A  +F+ +    + P
Sbjct: 304 AFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNP 363

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
            + +Y+ +I+G C+    + A  L + M  + I+PDV+TY+ +++G  K G +S A +  
Sbjct: 364 DIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLV 423

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           ++M  +G+ P    Y + +    K+    +A  L  ++  KG  P++ TY++L+ GLC+ 
Sbjct: 424 DQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQS 483

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G LE+A ++   ++  G   +  TYT +I      G       L + M   G  P   TY
Sbjct: 484 GKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTY 543

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
            ++I +   +   ++A     EM  +G+RP  I 
Sbjct: 544 EIIILSLFKKDENDMAEKLLREMIARGVRPRQIA 577



 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 116/410 (28%), Positives = 217/410 (52%), Gaps = 4/410 (0%)

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
           K++  SY+     +     + +A++L   ++ R   P    +N ++  L K        +
Sbjct: 47  KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLY 106

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
              +M  + + P++++ N L+  +C+ G I  AF +F ++     VP  +T+ TLI GLC
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLC 166

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
             G ++ A    + ++  G   D I+Y  +++G CK+G    A +    +    +QP+  
Sbjct: 167 LKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVV 226

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
            Y T I    K+   +EA+ L  EM++KG  PD++TY+ L+ G C LG L +A +L  KM
Sbjct: 227 MYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKM 286

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRL 609
           + +   PD  T+  +++A  + G ++ G+ +F+ M+++G+ P  VTY  L+  +     +
Sbjct: 287 ILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEV 346

Query: 610 ELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL 669
             A   F+ M   G+ P++ +Y+ +ING C++++ D+A  LF +M  + I+P+  TY+ L
Sbjct: 347 NKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSL 406

Query: 670 INENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVE 719
           I+    +G    AL+L  +M DR + P   T++++    LD   K+H V+
Sbjct: 407 IDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSI----LDALCKIHQVD 452



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 130/442 (29%), Positives = 228/442 (51%), Gaps = 14/442 (3%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G   D   F T+++ L   G ++ A+   + VV +  H   D +  G L   +       
Sbjct: 150 GYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFH--FDQISYGTLIHGL------- 200

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
                 K       L +  ++  N + P+V   N II  +       +A +++  M   G
Sbjct: 201 -----CKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKG 255

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           I P +VTY+ ++  FC  G++ +A++L  +M      P+  T+N+L+  F ++G++++ +
Sbjct: 256 ISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGK 315

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            +   M+K G+K +  +YN ++ GY     + +A ++   M   GV P + +Y+I+I G 
Sbjct: 316 TVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGF 375

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           CK  +  +A + F EM RKN+IPD+++Y++L+ G  +SG I  A  L D++  R + PT+
Sbjct: 376 CKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTI 435

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
            TYN+++D LC+   ++ A  L   + ++GI P++ TY+I++ G C+ G L  AR+ F  
Sbjct: 436 RTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEG 495

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           +L KG   +   YT  I G    G  +EA  L  +M   G  PD  TY +++  L K   
Sbjct: 496 LLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDE 555

Query: 539 LEEANELLRKMVGDGFIPDHIT 560
            + A +LLR+M+  G  P  I 
Sbjct: 556 NDMAEKLLREMIARGVRPRQIA 577



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 170/323 (52%), Gaps = 2/323 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +FNKM+   + PDV   N ++     +G   + + V+ MM + GIKP+ VTYN+++D +C
Sbjct: 282 LFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYC 341

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
              E+ +A  +   M   G +P+  +Y+++I GF +  + ++A  L ++M +  +     
Sbjct: 342 LVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVV 401

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +Y+ +I G S+ G +  AL L ++M  RGV PT+ TYN ++  LCK  +V  A     ++
Sbjct: 402 TYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKL 461

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
             K + P++ +Y+ L+ G C+SG + +A  +F+ L  +     V TY  +I G C  G  
Sbjct: 462 KDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLF 521

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
             A  L   M + G +PD  TY I++    K     MA +   EM+ +G++P + A   Q
Sbjct: 522 NEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQIAIWFQ 581

Query: 495 IAGELKLGDTSEAYRLQEEMLAK 517
              E  +  +SE   L E+ + K
Sbjct: 582 KKKEYDV--SSEPKTLTEQSVPK 602


>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 182/625 (29%), Positives = 301/625 (48%), Gaps = 36/625 (5%)

Query: 91  ELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETV 150
            L+ RV+ + +  P++AL F  WV  +  V       C ++ +L+ S     A +++  +
Sbjct: 8   SLVGRVICKFQNSPQLALEFHDWVLEKKSVLHSIESCCVVIHVLVNSKRYDDALFIMGNL 67

Query: 151 VCVNMHG---ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPD 207
           + VN      +LD LI        S  + D L+   T+    E    V  K+  +G    
Sbjct: 68  MNVNGISPLEVLDALISSYDICKSSPAVFDALVRTCTQIGATEGAYEVITKLQLDGFWVT 127

Query: 208 VKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLW 267
           V   N  +  L       +  ++Y+ M  +G   ++ T+N ++ +  KEG + EA+ +++
Sbjct: 128 VHAWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIY 187

Query: 268 EMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKG 327
                G  PN VT+N++I G  + G ++ A  L+R M                       
Sbjct: 188 RSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKM----------------------- 224

Query: 328 LLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYN 387
                    E M    V P   TYN  + G CK G ++ A     EML K + P++ +Y 
Sbjct: 225 ---------EVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYA 275

Query: 388 TLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
           TL+ GY R G++  AF L DEL  + L+P  V YN++I  L   GD+E A  L  +MI++
Sbjct: 276 TLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDK 335

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
            I PD  TY+I++ G C+ G L+ A +F   +L   L  D F++   I    +  + + A
Sbjct: 336 RIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGA 395

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
            +L   M  +G  PD++T+  L+   CK G +E A ++  KM+  G  P+ + Y S+I+ 
Sbjct: 396 KQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVING 455

Query: 568 SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
             + G       L + + R GL   +VTY  LIH +   G+++ AF  FSEM+  GI  +
Sbjct: 456 FAKEGSFDPAILLIDTLRRMGLFD-VVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILAS 514

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYK 687
            +TYN LIN LC+   + QA  L   M   G++P+  TYTILI       + +E + L+ 
Sbjct: 515 HVTYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIELHD 574

Query: 688 EMLDREIEPDYCTHSALLLKQLDKD 712
            M+ + + PD  T+  +++  L ++
Sbjct: 575 YMVLKGVVPDRQTYQTMVIPLLQEE 599



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/305 (34%), Positives = 159/305 (52%), Gaps = 1/305 (0%)

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
           E G+ P+ V YN+++     EG+M+ A  LL +M  +   P+  TY+++I G  RNG L 
Sbjct: 299 EKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLN 358

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
           +A   ++ +L++ L   A S+N +I        L  A  L   M  RG+ P + T+  LI
Sbjct: 359 EAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLI 418

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
              CK G+V +A   + +M++    P+++ YN+++ G+ + G+   A LL D LR   L 
Sbjct: 419 DRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRRMGLF 478

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
             VVTYNTLI G C  G ++ A  L   M N GIL   +TY  ++N  CK G++  A+E 
Sbjct: 479 D-VVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQAKEL 537

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
              M+ +GL PD   YT  I    K     E   L + M+ KG  PD  TY  +V  L +
Sbjct: 538 MKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYMVLKGVVPDRQTYQTMVIPLLQ 597

Query: 536 LGSLE 540
             S+E
Sbjct: 598 EESVE 602


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 139/441 (31%), Positives = 245/441 (55%), Gaps = 5/441 (1%)

Query: 222 GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY 281
           GFSV  +     + + G KPSI+T+NT+++  C EG + EA+E L  +  RG  P   T+
Sbjct: 158 GFSVLGK-----IFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTH 212

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
            +++ G  + G+   A   ++ M++L  +    SY+ II    +  L+ EA++L   M +
Sbjct: 213 TMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRS 272

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
            G++PT+ TYN LIYG+C  G+   A   F EML  N+ PD+++++ L+   C+ G + E
Sbjct: 273 IGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLE 332

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           A  +F ++    + P +VTY++LI G+C+    + +  L   M+++ I PDV+T++I V+
Sbjct: 333 ALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVD 392

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
             CK G +S A+   N M+ +GL+P+   Y + + G        EA ++ + M+ KG  P
Sbjct: 393 VFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAP 452

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           D+++YN+L+ G CK   ++EA +L  +M   G  P+ IT+T++I    + G     ++LF
Sbjct: 453 DVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELF 512

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
             M   G  P L+TY+ L+      G L+ A   F  ++   ++PN +    L+ G+C+ 
Sbjct: 513 KKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKA 572

Query: 642 RRIDQAYGLFIDMEEEGILPN 662
            +++ A  LF  +  E + P+
Sbjct: 573 GKLEDAKELFSSLSIEELQPD 593



 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 146/511 (28%), Positives = 259/511 (50%)

Query: 187 SMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTY 246
           S  +  L  FN+M+     P +   N+++  L           +YR M  FG+  S+ T 
Sbjct: 83  SNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTL 142

Query: 247 NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
             +++  C    +     +L ++   G  P+ +T+N LI G    G + +A   +  ++ 
Sbjct: 143 TILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMS 202

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
            G + + +++  I+ G  + G    A+   ++MV     P + +Y+I+I  LCK   V++
Sbjct: 203 RGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNE 262

Query: 367 ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
           A   F+ M    + P +++YN+L+YG C SG   +A +LF E+   N+ P VVT++ L+D
Sbjct: 263 AVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVD 322

Query: 427 GLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
            LC+ G +  A  +   MI   + PD++TY+ +++G CK      +    NEML + ++P
Sbjct: 323 ALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRP 382

Query: 487 DRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
           D   ++  +    K G  SEA  +   M+ +G  P+++TYN L+ G C    ++EA ++ 
Sbjct: 383 DVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVF 442

Query: 547 RKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAAR 606
             MV  G  PD ++Y  +I    +   +   + LF+ M  KGL+P  +T+T LI      
Sbjct: 443 DIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQA 502

Query: 607 GRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
           GR   A   F +M   G  P++ITY+ L++G C+   +D+A  LF  +++  + PN    
Sbjct: 503 GRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVIC 562

Query: 667 TILINENCNAGNWQEALRLYKEMLDREIEPD 697
            IL+   C AG  ++A  L+  +   E++PD
Sbjct: 563 KILLGGMCKAGKLEDAKELFSSLSIEELQPD 593



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 142/465 (30%), Positives = 250/465 (53%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P I  +N +L +  +       + +  +M+  G S +  T  +LI        +     +
Sbjct: 102 PCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSV 161

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  + KLG K S  ++N +I G   +G +VEA+   + +++RG  PT+ T+ +++ GLCK
Sbjct: 162 LGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCK 221

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G+ S A     +M+  +  P+++SY+ ++   C++  + EA  LF  +RS  + PTVVT
Sbjct: 222 IGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVT 281

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YN+LI G+C  G  + A  L + M+   + PDV+T++I+V+  CK G +  A   F +M+
Sbjct: 282 YNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMI 341

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           +  ++PD   Y++ I G  K     E+  L  EML++   PD++T+++ V   CK G + 
Sbjct: 342 QIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVS 401

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA  ++  M+  G  P+ +TY S++        +   R +F+ M+ KG +P +++Y +LI
Sbjct: 402 EAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILI 461

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
             +    R++ A   F EM  KG+ PN IT+  LI+GLC+  R   A  LF  M   G  
Sbjct: 462 KGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCP 521

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           P+  TY+ L++  C  G+  EAL L++ +   +++P++     LL
Sbjct: 522 PDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILL 566



 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 136/434 (31%), Positives = 230/434 (52%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V  K+ + G  P +   N +I  L   G  V+A E    +   G +P++ T+  +++  C
Sbjct: 161 VLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLC 220

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K G+   A+  + +M    C P  V+Y+++I    +N  + +A  L   M  +G+  +  
Sbjct: 221 KIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVV 280

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +YN +I G    G   +A  L +EM+   + P + T++IL+  LCK G V +A   F +M
Sbjct: 281 TYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKM 340

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           ++  + PDI++Y++L++G C+S    E+  L +E+ SRN+ P VVT++  +D  C+ G +
Sbjct: 341 IQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMV 400

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
             AQ +   MI +G+ P+V+TY  +++G C    +  AR+ F+ M+ KG  PD  +Y   
Sbjct: 401 SEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNIL 460

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I G  K     EA +L +EM  KG  P+ IT+  L+ GLC+ G    A EL +KM   G 
Sbjct: 461 IKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGC 520

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            PD ITY++++    + G L     LF  + +  L P  V   +L+      G+LE A  
Sbjct: 521 PPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKE 580

Query: 615 YFSEMQVKGIRPNV 628
            FS + ++ ++P+V
Sbjct: 581 LFSSLSIEELQPDV 594



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 112/410 (27%), Positives = 192/410 (46%), Gaps = 35/410 (8%)

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
           +AL    +MV     P +  +N L+  L +          + +M    V   + +   L+
Sbjct: 87  DALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILI 146

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
              C    +G  F +  ++      P+++T+NTLI+GLC  G +  A +  + ++++G  
Sbjct: 147 NCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQ 206

Query: 451 PDVITYTIMVNGSCKMGNLSM-----------------------------------AREF 475
           P V T+T++VNG CK+G  S                                    A + 
Sbjct: 207 PTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDL 266

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
           F  M   G+ P    Y + I G    G   +A  L +EML     PD++T+++LV  LCK
Sbjct: 267 FYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCK 326

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
            G + EA  +  KM+     PD +TY+S+IH   +    +    L N ML + + P +VT
Sbjct: 327 EGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVT 386

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           +++ +     +G +  A    + M  +G+RPNV+TYN+L++G C   ++D+A  +F  M 
Sbjct: 387 FSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMV 446

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            +G  P+  +Y ILI   C +    EA +L+ EM  + + P+  TH+ L+
Sbjct: 447 NKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLI 496



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 158/312 (50%), Gaps = 3/312 (0%)

Query: 394 CRSG---NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
           C+ G   N  +A   F+++   N  P +  +N L+  L R    +    +   M   G+ 
Sbjct: 77  CKGGSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVS 136

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
             V T TI++N  C +  + +      ++ + G +P    + T I G    G   EA   
Sbjct: 137 CSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQ 196

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
            + ++++G+ P + T+ ++V+GLCK+G    A   ++KMV     P+ ++Y+ II +  +
Sbjct: 197 LDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCK 256

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
              +    DLF +M   G+SPT+VTY  LI+     G+ + A + F EM    ++P+V+T
Sbjct: 257 NRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVT 316

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           ++ L++ LC+   + +A  +F  M +  + P+  TY+ LI+  C +  W+E+  L  EML
Sbjct: 317 FSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEML 376

Query: 691 DREIEPDYCTHS 702
            R I PD  T S
Sbjct: 377 SRNIRPDVVTFS 388



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 122/249 (48%), Gaps = 3/249 (1%)

Query: 460 VNGSCKMG---NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA 516
           V   CK G   N   A  +FN+M+     P    +   +A  +++        +  +M  
Sbjct: 73  VRDKCKGGSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEF 132

Query: 517 KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
            G    + T  +L++ LC L  +     +L K+   GF P  IT+ ++I+     G +  
Sbjct: 133 FGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVE 192

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
             +  + ++ +G  PT+ T+T++++     G+   A ++  +M      P V++Y+ +I+
Sbjct: 193 AMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIID 252

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
            LC+ R +++A  LF  M   GI P   TY  LI   CN+G W++A  L+KEML+  ++P
Sbjct: 253 SLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKP 312

Query: 697 DYCTHSALL 705
           D  T S L+
Sbjct: 313 DVVTFSILV 321


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 152/482 (31%), Positives = 245/482 (50%), Gaps = 8/482 (1%)

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
           N +I  L   G    A  VYR M +    P  +TY  ++    K   +++A+++L EM  
Sbjct: 9   NVVIGGLCRAGRLRHALGVYRQMND-AHPPDFLTYTKLVHGLSKARRLRDAVQVLQEMVS 67

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
               P+  T  V++        ++ AR L+ +ML  G+  +A +Y+ ++ G  +   L E
Sbjct: 68  ARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDE 127

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE-MLRKNVIPDIISYNTLL 390
           A+ L E M  RG APT+ TYN +I G C+  RV +A H F E M+ +   PDII+Y  L+
Sbjct: 128 AVALVETMAERGCAPTVVTYNSIITGFCRARRVDEA-HGFMEQMVAEGCHPDIITYTALI 186

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
            G+C+S ++G    L  E+  R   P +VTY+T+IDGLC+ G L  A  + E M      
Sbjct: 187 GGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCA 243

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
           P  ITY  ++ G C+ G++  A     +M+     PD   YTT ++   K+G   +AY L
Sbjct: 244 PTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYEL 303

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
            ++M+A    PD++T+  LV GLC  G +E+A ELL ++   G  P   TY  ++    +
Sbjct: 304 FQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCK 363

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG--IRPNV 628
              +R+  +L  +   +G  P  VTY +L+      GR + A  Y  ++  +G     +V
Sbjct: 364 ANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSV 423

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
             Y  +++ LCR  R D A   + +M + G +P   T+  ++   C A   Q+A  L +E
Sbjct: 424 AMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEE 483

Query: 689 ML 690
           M+
Sbjct: 484 MI 485



 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 156/492 (31%), Positives = 234/492 (47%), Gaps = 51/492 (10%)

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH-----SYNPIICGYSEKGLL 329
           +P  + +NV+I G  R G L  A G+ R M        AH     +Y  ++ G S+   L
Sbjct: 2   NPGTLLHNVVIGGLCRAGRLRHALGVYRQM------NDAHPPDFLTYTKLVHGLSKARRL 55

Query: 330 VEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTL 389
            +A+ + +EMV+    P   T  +++  LC   RV DAR    EML + +  + I+Y+ L
Sbjct: 56  RDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSAL 115

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
           + G C+   + EA  L + +  R   PTVVTYN++I G CR   ++ A    E M+ +G 
Sbjct: 116 VDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGC 175

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
            PD+ITYT ++ G CK  ++    E   E+ R+G  PD   Y+T I G  K G   +A  
Sbjct: 176 HPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVD 235

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           + EEM      P  ITYN L+ G C+ G ++EA  LL KMV D   PD +TYT+++ A  
Sbjct: 236 IFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFC 292

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
           +MG L    +LF  M+   LSP +VT+T L+      GR+E A     E+  +G  P + 
Sbjct: 293 KMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIY 352

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR----- 684
           TYN +++G C+  ++ +A  L  D    G +PN  TY IL+   C AG   +AL+     
Sbjct: 353 TYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQL 412

Query: 685 --------------------------------LYKEMLDREIEPDYCTHSALLLKQLDKD 712
                                            Y+EM+ R   P   T + ++       
Sbjct: 413 NSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAH 472

Query: 713 YKVHAVEYLESL 724
               A E LE +
Sbjct: 473 QPQQAHELLEEM 484



 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 143/451 (31%), Positives = 231/451 (51%), Gaps = 5/451 (1%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P   T   ++ S C    + +A EL+ EM  RG + N +TY+ L+ G  +   L++A  L
Sbjct: 72  PDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVAL 131

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  M + G   +  +YN II G+     + EA    E+MV  G  P + TY  LI G CK
Sbjct: 132 VETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCK 191

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
              V        E+ R+   PDI++Y+T++ G C++G + +A  +F+E+   +  PT +T
Sbjct: 192 SRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAIT 248

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YN+LI G CR GD++ A +L   M++    PDV+TYT +++  CKMG L  A E F +M+
Sbjct: 249 YNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMV 308

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
              L PD   +T+ + G    G   +A  L EE+  +G PP + TYN +V G CK   + 
Sbjct: 309 ANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVR 368

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG-LSPTLVT-YTV 598
           +A EL+      GF+P+ +TY  ++      G   +     + +  +G   PT V  Y +
Sbjct: 369 KAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAI 428

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           ++ A    GR + A  ++ EM  +G  P   T+  ++  LC+  +  QA+ L  +M + G
Sbjct: 429 ILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYG 488

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEM 689
             P   T   +++  C AG  Q+A  L  E+
Sbjct: 489 HTPGPGTCDAVVSAYCRAGMIQKADELASEL 519



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 133/475 (28%), Positives = 228/475 (48%), Gaps = 40/475 (8%)

Query: 184 TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
           +K   +   + V  +M+    +PD      +++ L        ARE+   M   G+  + 
Sbjct: 50  SKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANA 109

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           +TY+ ++D  CK   + EA+ L+  M  RGC+P  VTYN +ITGF R   +++A G +  
Sbjct: 110 ITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQ 169

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M+  G      +Y  +I G+ +   +   L L  E+  RG  P + TY+ +I GLCK GR
Sbjct: 170 MVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGR 229

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           + DA   F EM   +  P  I+YN+L+ GYCR+G++ EA  L  ++      P VVTY T
Sbjct: 230 LRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTT 286

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           L+   C+ G L+ A +L + M+   + PDV+T+T +V+G C  G +  A E   E+ R+G
Sbjct: 287 LMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRG 346

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV------------- 530
             P  + Y   + G  K     +A  L  +  ++GF P+ +TYN+LV             
Sbjct: 347 CPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQAL 406

Query: 531 ------------------------HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
                                     LC+ G  ++A +   +M+  G++P   T+ +++ 
Sbjct: 407 QYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVF 466

Query: 567 ASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
           A  +    ++  +L   M++ G +P   T   ++ A+   G ++ A    SE+++
Sbjct: 467 ALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELRL 521



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 196/375 (52%), Gaps = 17/375 (4%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR---MMGEF-- 237
           + +   V++      +M+  G  PD+     +I      GF  K+R+V R   ++GE   
Sbjct: 154 FCRARRVDEAHGFMEQMVAEGCHPDIITYTALI-----GGF-CKSRDVGRGLELLGEVTR 207

Query: 238 -GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G  P IVTY+T++D  CK G +++A+++  EM    C+P  +TYN LI G+ R G++++
Sbjct: 208 RGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYCRAGDMDE 264

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  L+  M+         +Y  ++  + + G L +A  L ++MV   ++P + T+  L+ 
Sbjct: 265 AIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVD 324

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           GLC  GR+ DA     E+ R+   P I +YN ++ GYC++  + +A  L  + RSR  VP
Sbjct: 325 GLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVP 384

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQG--ILPDVITYTIMVNGSCKMGNLSMARE 474
             VTYN L+ G CR G  + A Q  + + ++G      V  Y I+++  C+ G    A +
Sbjct: 385 NTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQ 444

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
           F+ EM+++G  P    + T +    K     +A+ L EEM+  G  P   T + +V   C
Sbjct: 445 FYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYC 504

Query: 535 KLGSLEEANELLRKM 549
           + G +++A+EL  ++
Sbjct: 505 RAGMIQKADELASEL 519



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 173/361 (47%), Gaps = 7/361 (1%)

Query: 156 HGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRII 215
           HG ++ ++  G      I     L+  + K   V + L +  ++ R G  PD+   + +I
Sbjct: 164 HGFMEQMVAEGCHP--DIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVI 221

Query: 216 KVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCS 275
             L   G   + R+   +  E    P+ +TYN+++  +C+ G+M EA+ LL +M    C+
Sbjct: 222 DGLCKAG---RLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCA 278

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           P+ VTY  L++ F + G L+ A  L + M+   L     ++  ++ G   +G + +AL L
Sbjct: 279 PDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALEL 338

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
            EE+  RG  PT+ TYN ++ G CK  +V  A     +   +  +P+ ++YN L+ G CR
Sbjct: 339 LEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCR 398

Query: 396 SGNIGEAFLLFDELRSR-NLVPT-VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
           +G   +A    D+L S     PT V  Y  ++D LCR G  + A Q  E MI +G +P  
Sbjct: 399 AGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAA 458

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
            T+  +V   CK      A E   EM++ G  P        ++   + G   +A  L  E
Sbjct: 459 ATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASE 518

Query: 514 M 514
           +
Sbjct: 519 L 519



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 75/223 (33%), Positives = 114/223 (51%), Gaps = 3/223 (1%)

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           + P    +   I G  + G    A  +  +M     PPD +TY  LVHGL K   L +A 
Sbjct: 1   MNPGTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKARRLRDAV 59

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGD-LRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
           ++L++MV    +PD+ T T ++  SL +GD +   R+L   ML +G++   +TY+ L+  
Sbjct: 60  QVLQEMVSARHVPDNTTLTVVVQ-SLCLGDRVDDARELVEEMLHRGMAANAITYSALVDG 118

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
                RL+ A      M  +G  P V+TYN++I G CR RR+D+A+G    M  EG  P+
Sbjct: 119 LCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPD 178

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             TYT LI   C + +    L L  E+  R   PD  T+S ++
Sbjct: 179 IITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVI 221



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 146/315 (46%), Gaps = 20/315 (6%)

Query: 116 TQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGG-----GLSSC 170
           T+ G   D   + T+++ L ++G LR A  + E + C       + LIGG      +   
Sbjct: 206 TRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEA 265

Query: 171 VSI--KILD-----------LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
           + +  K++D            L+  + K   ++    +F +M+ N L PDV     ++  
Sbjct: 266 IRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDG 325

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
           L   G    A E+   +   G  P+I TYN ++D +CK  ++++A EL+ + + RG  PN
Sbjct: 326 LCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPN 385

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLG--LKVSAHSYNPIICGYSEKGLLVEALNL 335
            VTYN+L+ G  R G  +QA   +  +   G     S   Y  I+      G   +A+  
Sbjct: 386 TVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQF 445

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
            EEM+ RG  P  AT+  +++ LCK  +   A     EM++    P   + + ++  YCR
Sbjct: 446 YEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCR 505

Query: 396 SGNIGEAFLLFDELR 410
           +G I +A  L  ELR
Sbjct: 506 AGMIQKADELASELR 520


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 153/516 (29%), Positives = 261/516 (50%), Gaps = 44/516 (8%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRM----MGEFGIKPSIVTYNTMLD 251
           F ++LR GL  D    N  +K L    ++ +  E   M    M E G  P   +YNT++ 
Sbjct: 188 FARLLRAGLRTDGIVTNTFLKCL---CYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIK 244

Query: 252 SFCKEGEMQEALELLWEM-QGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
           S C     QEAL++L  M +G GCSP+ V+Y ++I G    GE+ +              
Sbjct: 245 SLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISK-------------- 290

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
                                A NL  EMV +GV P + TYN +++ LCK   +  A   
Sbjct: 291 ---------------------ACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELV 329

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
             +M   ++ PD ++Y  +++GY   G   EA  +F E+    L+P +VT+N+L+D LC+
Sbjct: 330 LRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCK 389

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
           +   + A ++  ++  +G  PD+I+Y+I+++G    G        F+ M   G+  D   
Sbjct: 390 HKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHC 449

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           +   I    K G   EA  +  EM  +G  P+++TY  ++  LC++G L +A E L +M+
Sbjct: 450 FNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMI 509

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS-PTLVTYTVLIHAHAARGRL 609
             G  P+ + Y S+I      GDL + ++L + M+ +G+  P +  ++ +IH+    GR+
Sbjct: 510 SIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRV 569

Query: 610 ELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL 669
             A   F+ +   G RP++ T+N+LI+G C + ++D+A+G+   M   G  P+  TY+ L
Sbjct: 570 MNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTL 629

Query: 670 INENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           IN    +G   + L L++EML + ++P   T+S +L
Sbjct: 630 INGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVL 665



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 154/514 (29%), Positives = 262/514 (50%), Gaps = 3/514 (0%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE-VYRMMGE 236
           L  L Y K++  E   ++ ++M   G +PD  + N +IK L     S +A + + RM   
Sbjct: 207 LKCLCYAKRT-DEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKG 265

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G  P +V+Y  ++     EGE+ +A  L  EM  +G  PN VTYN ++    +   +++
Sbjct: 266 DGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDK 325

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  ++R M    ++    +Y  +I GYS  G   EA  + +EM   G+ P + T+N L+ 
Sbjct: 326 AELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMD 385

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
            LCK  R  +A   F  +  K   PDIISY+ LL+GY   G   +   LF  +    +V 
Sbjct: 386 SLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVA 445

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
               +N LI+   + G ++ A  +   M  QG+ P+V+TY  ++   C+MG L+ A E  
Sbjct: 446 DSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKL 505

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP-PDLITYNVLVHGLCK 535
           ++M+  GL+P+   Y + I G    GD  +A  L  EM+ +G P P++  ++ ++H LC 
Sbjct: 506 SQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCN 565

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
            G +  A ++   ++  G  PD  T+ S+I     +G + +   + + M+  G  P +VT
Sbjct: 566 EGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVT 625

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           Y+ LI+ +   GR++   + F EM  K ++P  +TY+ +++GL R  R   A  +F +M 
Sbjct: 626 YSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMI 685

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           E G   +  TYTI++   C      EA+ L+ ++
Sbjct: 686 ESGTAMSISTYTIILQGLCRNNCTDEAITLFHKL 719



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 141/516 (27%), Positives = 264/516 (51%), Gaps = 6/516 (1%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +FN+M++ G++P+V   N I+  L       KA  V R M +  I+P  VTY  M+  + 
Sbjct: 294 LFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYS 353

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
             G  +EA ++  EM   G  P+ VT+N L+    ++   ++A  +   +   G K    
Sbjct: 354 CLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDII 413

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           SY+ ++ GY+ +G  V+  NL   M   G+      +NILI    K G + +A   F EM
Sbjct: 414 SYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEM 473

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
             + V P++++Y T++   CR G + +A     ++ S  L P  V Y++LI G C +GDL
Sbjct: 474 RGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDL 533

Query: 435 EVAQQLKENMINQGI-LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
             A++L   M++QGI  P++  ++ +++  C  G +  A++ FN ++  G +PD F + +
Sbjct: 534 IKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNS 593

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            I G   +G   +A+ + + M++ G  PD++TY+ L++G  K G +++   L R+M+   
Sbjct: 594 LIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKR 653

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
             P  +TY+ ++      G     + +F+ M+  G + ++ TYT+++         + A 
Sbjct: 654 VKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAI 713

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
             F ++    ++  +   N +I+ L +++R ++A+ LF  +   G++PN  TY ++I   
Sbjct: 714 TLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINL 773

Query: 674 CNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQL 709
              G+ +EA  ++  M     E   C  S+ LL  +
Sbjct: 774 LKEGSVEEADIMFSSM-----EKTGCAPSSRLLNDI 804



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 145/538 (26%), Positives = 262/538 (48%), Gaps = 38/538 (7%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   +++  LV  +M  N + PD      +I      G   +A ++++ M   G+ P IV
Sbjct: 319 KARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIV 378

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           T+N+++DS CK    +EA E+   +  +G  P+ ++Y++L+ G++  G       L   M
Sbjct: 379 TFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSM 438

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
              G+   +H +N +I  ++++G++ EAL +  EM  +GV+P + TY  +I  LC+ GR+
Sbjct: 439 TDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRL 498

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR------------ 412
           +DA  +  +M+   + P+ + Y++L+ G+C  G++ +A  L  E+  +            
Sbjct: 499 ADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSS 558

Query: 413 ------------------NLV------PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
                             NLV      P + T+N+LIDG C  G ++ A  + + M++ G
Sbjct: 559 IIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAG 618

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
             PDV+TY+ ++NG  K G +      F EML K ++P    Y+  + G  + G TS A 
Sbjct: 619 TEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAK 678

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
           ++  EM+  G    + TY +++ GLC+    +EA  L  K+       +     ++IHA 
Sbjct: 679 KMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHAL 738

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
            ++       DLF ++   GL P   TY V+I      G +E A + FS M+  G  P+ 
Sbjct: 739 YKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSS 798

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILP-NKYTYTILINENCNAGNWQEALRL 685
              N +I  L +   I +A G ++   +  I+     T ++LI+   + G ++E ++ 
Sbjct: 799 RLLNDIIRMLLQKGEIVKA-GYYMSKVDGTIISLEASTTSLLISLFASKGRYREQIKF 855



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 10/127 (7%)

Query: 580 LFNNMLRKGLSPTLV-----TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
           LFN + R+   P +V     TY +L+       R +L   +F+ +   G+R + I  N  
Sbjct: 147 LFNRICREEAGPRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTF 206

Query: 635 INGLCRLRRIDQAYGLFID-MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
           +  LC  +R D+A  + +  M E G +P+ ++Y  +I   C     QEAL    +ML R 
Sbjct: 207 LKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEAL----DMLLRM 262

Query: 694 IEPDYCT 700
            + D C+
Sbjct: 263 TKGDGCS 269



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/211 (23%), Positives = 88/211 (41%), Gaps = 2/211 (0%)

Query: 157 GILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK 216
           G+LD ++  G      +     L+  Y K   ++  L++F +ML   + P     + ++ 
Sbjct: 609 GVLDAMVSAGTEP--DVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLD 666

Query: 217 VLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSP 276
            L   G +  A++++  M E G   SI TY  +L   C+     EA+ L  ++       
Sbjct: 667 GLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKF 726

Query: 277 NGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLE 336
                N +I    +    E+A  L   +   GL  +A +Y  +I    ++G + EA  + 
Sbjct: 727 EIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMF 786

Query: 337 EEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
             M   G AP+    N +I  L + G +  A
Sbjct: 787 SSMEKTGCAPSSRLLNDIIRMLLQKGEIVKA 817


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 250/484 (51%), Gaps = 1/484 (0%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PS V +N +L S  K  +      L  +M   G  P+  T N+LI  F     L  A  +
Sbjct: 67  PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSV 126

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  +LKLG +    ++  +I G   +G + +AL+L ++M+  G  P + TY  LI GLCK
Sbjct: 127 LAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 186

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G  + A      M + N  PD++ Y +++   C+   + EAF LF ++  + + P + T
Sbjct: 187 VGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFT 246

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y +LI  LC   + +    L   MIN  I+PDV+ ++ +V+  CK G ++ A +  + M+
Sbjct: 247 YTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMI 306

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            +G++P+   Y   + G     +  EA ++ + M+  G+ P++I+YN L++G CK+  ++
Sbjct: 307 IRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMD 366

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           +A  L  +M     IP+ +TY +++H    +G L+    LF+ M+  G  P L TY +L+
Sbjct: 367 KATYLFEEMCQKELIPNTVTYNTLMHXC-HVGRLQDAIALFHEMVAHGQIPDLATYRILL 425

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                +  L+ A      ++   + P++  Y  +I+G+CR   ++ A  +F ++  +G+ 
Sbjct: 426 DYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLR 485

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
           PN  TYTI+IN  C  G   EA +L+ EM      PD CT++ +    L     + A++ 
Sbjct: 486 PNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQL 545

Query: 721 LESL 724
           L+ +
Sbjct: 546 LQEM 549



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 157/535 (29%), Positives = 261/535 (48%), Gaps = 2/535 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           ++  L  FN+ML     P   + NR++  +           +   M  FGI P + T N 
Sbjct: 50  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 109

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++SFC    +  A  +L ++   G  P+  T+  LI G    G++  A  L   M+  G
Sbjct: 110 LINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 169

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            + +  +Y  +I G  + G    A+ L   M      P +  Y  +I  LCK  +V++A 
Sbjct: 170 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 229

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
           + F +M+ + + PDI +Y +L++  C          L +++ +  ++P VV ++T++D L
Sbjct: 230 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 289

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G +  A  + + MI +G+ P+V+TY  +++G C    +  A + F+ M+  G  P+ 
Sbjct: 290 CKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNV 349

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
            +Y T I G  K+    +A  L EEM  K   P+ +TYN L+H  C +G L++A  L  +
Sbjct: 350 ISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIALFHE 408

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           MV  G IPD  TY  ++    +   L     L   +    + P +  YT++I      G 
Sbjct: 409 MVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGE 468

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           LE A   FS +  KG+RPNV TY  +INGLCR   +D+A  LF++M+  G  P+  TY  
Sbjct: 469 LEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNT 528

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLES 723
           +            A++L +EML R    D  T + LL++ L  D    +V+ + S
Sbjct: 529 ITQGLLQNKEALRAIQLLQEMLARGFSADVST-TTLLVEMLCDDKLDQSVKQILS 582



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 204/396 (51%), Gaps = 1/396 (0%)

Query: 329 LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNT 388
           L +AL+    M+     P+   +N L+  + K  +         +M    + PD+ + N 
Sbjct: 50  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 109

Query: 389 LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
           L+  +C    +G AF +  ++      P   T+ TLI GLC  G +  A  L + MI +G
Sbjct: 110 LINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 169

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
             P+V+TY  ++NG CK+GN + A      M +   QPD   YT+ I    K    +EA+
Sbjct: 170 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 229

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
            L  +M+ +G  PD+ TY  L+H LC L   +    LL +M+    +PD + +++++ A 
Sbjct: 230 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 289

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
            + G +    D+ + M+ +G+ P +VTY  L+  H  +  ++ A   F  M   G  PNV
Sbjct: 290 CKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNV 349

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
           I+YN LING C+++R+D+A  LF +M ++ ++PN  TY  L++  C+ G  Q+A+ L+ E
Sbjct: 350 ISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHX-CHVGRLQDAIALFHE 408

Query: 689 MLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           M+     PD  T+  LL     K +   A+  L+++
Sbjct: 409 MVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTI 444



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/366 (33%), Positives = 193/366 (52%), Gaps = 1/366 (0%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   V +   +F+KM+  G+ PD+     +I  L +         +   M    I P +V
Sbjct: 221 KDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVV 280

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
            ++T++D+ CKEG++ EA +++  M  RG  PN VTYN L+ G     E+++A  +   M
Sbjct: 281 IFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTM 340

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           +  G   +  SYN +I GY +   + +A  L EEM  + + P   TYN L++  C  GR+
Sbjct: 341 VHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRL 399

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            DA   F EM+    IPD+ +Y  LL   C+  ++ EA  L   +   N+ P +  Y  +
Sbjct: 400 QDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIV 459

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           IDG+CR G+LE A+ +  N+ ++G+ P+V TYTIM+NG C+ G L  A + F EM   G 
Sbjct: 460 IDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGC 519

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            PD   Y T   G L+  +   A +L +EMLA+GF  D+ T  +LV  LC     +   +
Sbjct: 520 SPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQ 579

Query: 545 LLRKMV 550
           +L + V
Sbjct: 580 ILSEFV 585



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 74/138 (53%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +LL    KKS +++ + +   +  + + PD++    +I  +   G    AR+++  +   
Sbjct: 423 ILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSK 482

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G++P++ TY  M++  C+ G + EA +L  EM G GCSP+G TYN +  G  +N E  +A
Sbjct: 483 GLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRA 542

Query: 298 RGLIRDMLKLGLKVSAHS 315
             L+++ML  G      +
Sbjct: 543 IQLLQEMLARGFSADVST 560


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 193/690 (27%), Positives = 307/690 (44%), Gaps = 78/690 (11%)

Query: 92  LLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVV 151
           L+V VL+ ++  P + ++FF W   Q G      V+  +LE+L   G  R     +  + 
Sbjct: 131 LVVDVLSLVK-NPELGVKFFIWAGRQIGYGHTGPVYHALLEVLGCGGNDRVPEQFLREIR 189

Query: 152 CVNMHGILDVLIGGGLSSCVSIKILDLLL--LIYTKKSMVEQCLLVFNKMLRNGLLPDVK 209
             +   IL  L+   +  C    + ++ L  L   K    +   L +N ++R  L  D  
Sbjct: 190 DEDKE-ILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRL 248

Query: 210 NCNRII-KVLRDNGFSVKA----------------REVYRMMGEFGIKPSIVTYNTMLDS 252
           +   ++ + + D+GF++                  RE   ++ +   K   V Y  M+  
Sbjct: 249 DTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISG 308

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
            C+    +EA++ L  M+   C PN VTY +L+ G  R  +L + + ++  M+  G   S
Sbjct: 309 LCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPS 368

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG--------------- 357
              +N +I  Y   G    A  L ++M   G  P    YNILI G               
Sbjct: 369 RRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLEL 428

Query: 358 --------------------------LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
                                     LC  G+   A     EM+ K  IPD  +Y+ ++ 
Sbjct: 429 AEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIG 488

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
             C +  +  AFLLF+E++S ++VP V TY  LID  C+ G L+ A++  + M+  G  P
Sbjct: 489 LLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAP 548

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           +V+TYT +++   K   +S A E F  ML +G  P+   YT  I G  K G   +A ++ 
Sbjct: 549 NVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIY 608

Query: 512 EEMLAKGFPPD----------------LITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
             M      PD                + TY  LV GLCK   ++EA +LL  M  +G  
Sbjct: 609 ARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCE 668

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           P+HI Y ++I    ++G L   + +F  M  +G  P + TY+ LI       RL+LA   
Sbjct: 669 PNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKV 728

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
            S M      PNVI Y  +I+GLC++ + D+AY L   MEE+G  PN  TYT +I+    
Sbjct: 729 LSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGK 788

Query: 676 AGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           AG   + L L ++M  +   P++ T+  L+
Sbjct: 789 AGKVDKCLELMRQMGAKGCAPNFVTYRVLI 818



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 159/532 (29%), Positives = 261/532 (49%), Gaps = 32/532 (6%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRII--KVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + S+ E+ +   ++M  +  +P+V    RI+    LR      + + +  MM   G  PS
Sbjct: 311 EASLFEEAMDFLSRMRSSSCIPNVVT-YRILLCGCLRKRQLG-RCKRILSMMITEGCYPS 368

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL-------- 294
              +N+++ ++C+ G+   A +LL +M   GC P  V YN+LI G   N +L        
Sbjct: 369 RRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLEL 428

Query: 295 -EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
            E+A G + D   +  KV+  +    +CG    G   +A ++  EM+++G  P  +TY+ 
Sbjct: 429 AEKAYGEMLDAHVVLNKVNVSNLARCLCG---AGKFEKAYSIIREMMSKGFIPDTSTYSK 485

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           +I  LC   +V +A   F EM   +V+PD+ +Y  L+  +C+ G + +A   FDE+    
Sbjct: 486 VIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDG 545

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
             P VVTY  LI    +   +  A +L E M+++G +P+V+TYT +++G CK G +  A 
Sbjct: 546 CAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKAC 605

Query: 474 EFFNEMLRKGLQPDR----------------FAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
           + +  M      PD                 F Y   + G  K     EA  L + M  +
Sbjct: 606 QIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVE 665

Query: 518 GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
           G  P+ I Y+ L+ G CK+G L+EA  +  KM   G+ P+  TY+S+I    +   L   
Sbjct: 666 GCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLA 725

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
             + + ML    +P ++ YT +I      G+ + A+   S M+ KG  PNV+TY A+I+G
Sbjct: 726 LKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDG 785

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
             +  ++D+   L   M  +G  PN  TY +LIN  C AG   +A +L  EM
Sbjct: 786 FGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEM 837



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 173/634 (27%), Positives = 284/634 (44%), Gaps = 66/634 (10%)

Query: 112 RWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCV 171
           RW E    ++++EF   T++   + SGL  ++ +             +D L     SSC+
Sbjct: 282 RWREALALIEKEEFKLDTVIYTQMISGLCEASLF----------EEAMDFLSRMRSSSCI 331

Query: 172 -SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV 230
            ++    +LL    +K  + +C  + + M+  G  P  +  N +I     +G    A ++
Sbjct: 332 PNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKL 391

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQ--EALELLWEMQGRGCSPNGVTYNVLITGF 288
            + MG+ G +P  V YN ++   C   ++   + LEL  +  G     + V   V ++  
Sbjct: 392 LKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNL 451

Query: 289 SR----NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           +R     G+ E+A  +IR+M+  G      +Y+ +I        +  A  L EEM +  V
Sbjct: 452 ARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHV 511

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
            P + TY ILI   CK G +  AR  F EM+R    P++++Y  L++ Y ++  +  A  
Sbjct: 512 VPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANE 571

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV----------- 453
           LF+ + S   +P VVTY  LIDG C+ G +E A Q+   M     +PDV           
Sbjct: 572 LFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNI 631

Query: 454 -----ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
                 TY  +V+G CK   +  AR+  + M  +G +P+   Y   I G  K+G   EA 
Sbjct: 632 RDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQ 691

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
            +  +M  +G+ P++ TY+ L+  L K   L+ A ++L +M+ +   P+ I YT +I   
Sbjct: 692 MVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGL 751

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
            ++G       L + M  KG  P +VTYT +I      G+++       +M  KG  PN 
Sbjct: 752 CKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNF 811

Query: 629 ITYNALINGLCRLRRIDQAY---------------------------------GLFIDME 655
           +TY  LIN  C    +D A+                                 GL  ++ 
Sbjct: 812 VTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIA 871

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           E   +P    Y ILI+  C AG  + AL L+KEM
Sbjct: 872 ENVAVPIIPAYRILIDSFCKAGRLELALELHKEM 905



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 152/517 (29%), Positives = 247/517 (47%), Gaps = 26/517 (5%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           E+   +  +M+  G +PD    +++I +L +      A  ++  M    + P + TY  +
Sbjct: 462 EKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTIL 521

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           +DSFCK G +Q+A +   EM   GC+PN VTY  LI  + +  ++  A  L   ML  G 
Sbjct: 522 IDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGC 581

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA------------------PTLATY 351
             +  +Y  +I G+ + G + +A  +   M  RG A                  P + TY
Sbjct: 582 IPNVVTYTALIDGHCKSGQIEKACQIYARM--RGNADIPDVDMYFKIDDGNIRDPNIFTY 639

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
             L+ GLCK  +V +AR     M  +   P+ I Y+ L+ G+C+ G + EA ++F ++  
Sbjct: 640 GALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSE 699

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           R   P V TY++LID L +   L++A ++   M+     P+VI YT M++G CK+G    
Sbjct: 700 RGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDE 759

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A    + M  KG  P+   YT  I G  K G   +   L  +M AKG  P+ +TY VL++
Sbjct: 760 AYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLIN 819

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHIT-YTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
             C  G L++A++LL +M    + P H+  Y  +I        +  G  L + +      
Sbjct: 820 HCCAAGLLDDAHQLLDEM-KQTYWPKHMAGYRKVIEGFNREFIISLG--LLDEIAENVAV 876

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQ--VKGIRPNVITYNALINGLCRLRRIDQAY 648
           P +  Y +LI +    GRLELA     EM         +   Y++LI  L    ++D+A+
Sbjct: 877 PIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAF 936

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
            L+ DM + G +P    +  L+        W+EAL+L
Sbjct: 937 ELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQL 973


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 151/497 (30%), Positives = 257/497 (51%), Gaps = 22/497 (4%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
             +++RNG L D              GF      VYR     G  P I+   +++  FC+
Sbjct: 64  LRRLVRNGELED--------------GFKFLESMVYR-----GDIPDIIPCTSLIRGFCR 104

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
            G+ ++A  ++  ++  G  P+ +TYNVLI+G+ ++GE++ A   ++ + ++ +     +
Sbjct: 105 IGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNA---LQVLDRMNVAPDVVT 161

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           YN I+    + G L +A+ + +  + +   P + TY ILI   CK   V  A     EM 
Sbjct: 162 YNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMR 221

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
            K   PD+++YN L+ G C+ G + EA    + + S    P V+T+N ++  +C  G   
Sbjct: 222 NKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWM 281

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            A++L  +M+ +G  P V+T+ I++N  C+ G L  A +   +M   G  P+  +Y   +
Sbjct: 282 DAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLL 341

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
            G  K      A    + M+++G  PD++TYN L+  LCK G ++ A E+L ++   G  
Sbjct: 342 HGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCS 401

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           P  ITY ++I    ++G   R   L + M RKGL P ++TY+ L+   +  G+++ A  +
Sbjct: 402 PVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKF 461

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
           F +++  GIRPN ITYN+++ GLC+ R+ D+A      M  +   P + TYTILI     
Sbjct: 462 FHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAY 521

Query: 676 AGNWQEALRLYKEMLDR 692
            G  +EAL L  E+  R
Sbjct: 522 EGLAKEALDLLNELCSR 538



 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 146/456 (32%), Positives = 240/456 (52%), Gaps = 3/456 (0%)

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           L    + GE+++  + L  M  RG  P+ +    LI GF R G+ ++A  ++  + + G 
Sbjct: 64  LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
                +YN +I GY + G +  AL + + M    VAP + TYN ++  LC  G++  A  
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAME 180

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
                L+K   PD+I+Y  L+   C+   +G+A  L DE+R++   P VVTYN LI+G+C
Sbjct: 181 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 240

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
           + G L+ A +   NM + G  P+VIT+ I++   C  G    A +  ++MLRKG  P   
Sbjct: 241 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 300

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
            +   I    + G    A  + E+M   G  P+ ++YN L+HG CK   ++ A E L  M
Sbjct: 301 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 360

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRL 609
           V  G  PD +TY +++ A  + G +    ++ N +  KG SP L+TY  +I   +  G+ 
Sbjct: 361 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKT 420

Query: 610 ELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL 669
           E A     EM+ KG++P++ITY++L++GL R  ++D+A   F D+E  GI PN  TY  +
Sbjct: 421 ERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSI 480

Query: 670 INENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +   C +     A+     M+ +  +P   T++ L+
Sbjct: 481 MLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILI 516



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 136/424 (32%), Positives = 221/424 (52%), Gaps = 3/424 (0%)

Query: 201 RNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQ 260
           ++G +PDV   N +I     +G    A +V   M    + P +VTYNT+L + C  G+++
Sbjct: 120 QSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLK 176

Query: 261 EALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII 320
           +A+E+L     + C P+ +TY +LI    +   + QA  L+ +M   G K    +YN +I
Sbjct: 177 QAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLI 236

Query: 321 CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
            G  ++G L EA+     M + G  P + T+NI++  +C  GR  DA     +MLRK   
Sbjct: 237 NGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCS 296

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           P ++++N L+   CR G +G A  + +++      P  ++YN L+ G C+   ++ A + 
Sbjct: 297 PSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEY 356

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
            + M+++G  PD++TY  ++   CK G + +A E  N++  KG  P    Y T I G  K
Sbjct: 357 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSK 416

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
           +G T  A +L +EM  KG  PD+ITY+ LV GL + G ++EA +    + G G  P+ IT
Sbjct: 417 VGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAIT 476

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           Y SI+    +     R  D    M+ K   PT  TYT+LI   A  G  + A    +E+ 
Sbjct: 477 YNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELC 536

Query: 621 VKGI 624
            +G+
Sbjct: 537 SRGL 540



 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 130/432 (30%), Positives = 225/432 (52%), Gaps = 3/432 (0%)

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           RNGELE     +  M+  G          +I G+   G   +A  + E +   G  P + 
Sbjct: 69  RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVI 128

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           TYN+LI G CK G + +A      M   NV PD+++YNT+L   C SG + +A  + D  
Sbjct: 129 TYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 185

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
             +   P V+TY  LI+  C+   +  A +L + M N+G  PDV+TY +++NG CK G L
Sbjct: 186 LQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRL 245

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A +F N M   G QP+   +   +      G   +A +L  +ML KG  P ++T+N+L
Sbjct: 246 DEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNIL 305

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           ++ LC+ G L  A ++L KM   G  P+ ++Y  ++H   +   + R  +  + M+ +G 
Sbjct: 306 INFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 365

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
            P +VTY  L+ A    G++++A    +++  KG  P +ITYN +I+GL ++ + ++A  
Sbjct: 366 YPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIK 425

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQL 709
           L  +M  +G+ P+  TY+ L++     G   EA++ + ++    I P+  T+++++L   
Sbjct: 426 LLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLC 485

Query: 710 DKDYKVHAVEYL 721
                  A+++L
Sbjct: 486 KSRQTDRAIDFL 497



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/399 (31%), Positives = 204/399 (51%), Gaps = 5/399 (1%)

Query: 327 GLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISY 386
           G L +     E MV RG  P +     LI G C+ G+   A      + +   +PD+I+Y
Sbjct: 71  GELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITY 130

Query: 387 NTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMIN 446
           N L+ GYC+SG I  A  + D +   N+ P VVTYNT++  LC  G L+ A ++ +  + 
Sbjct: 131 NVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQ 187

Query: 447 QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSE 506
           +   PDVITYTI++  +CK   +  A +  +EM  KG +PD   Y   I G  K G   E
Sbjct: 188 KECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDE 247

Query: 507 AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
           A +    M + G  P++IT+N+++  +C  G   +A +LL  M+  G  P  +T+  +I+
Sbjct: 248 AIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILIN 307

Query: 567 ASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRP 626
                G L R  D+   M   G +P  ++Y  L+H      +++ A  Y   M  +G  P
Sbjct: 308 FLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYP 367

Query: 627 NVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLY 686
           +++TYN L+  LC+  ++D A  +   +  +G  P   TY  +I+     G  + A++L 
Sbjct: 368 DIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLL 427

Query: 687 KEMLDREIEPDYCTHSALLLKQLDKDYKV-HAVEYLESL 724
            EM  + ++PD  T+S+ L+  L ++ KV  A+++   L
Sbjct: 428 DEMRRKGLKPDIITYSS-LVSGLSREGKVDEAIKFFHDL 465



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 196/367 (53%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           ++Q + V ++ L+    PDV     +I+         +A ++   M   G KP +VTYN 
Sbjct: 175 LKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNV 234

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++  CKEG + EA++ L  M   GC PN +T+N+++      G    A  L+ DML+ G
Sbjct: 235 LINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKG 294

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
              S  ++N +I     +GLL  A+++ E+M   G  P   +YN L++G CK  ++  A 
Sbjct: 295 CSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAI 354

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
                M+ +   PDI++YNTLL   C+ G +  A  + ++L S+   P ++TYNT+IDGL
Sbjct: 355 EYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGL 414

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
            + G  E A +L + M  +G+ PD+ITY+ +V+G  + G +  A +FF+++   G++P+ 
Sbjct: 415 SKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNA 474

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             Y + + G  K   T  A      M++K   P   TY +L+ G+   G  +EA +LL +
Sbjct: 475 ITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNE 534

Query: 549 MVGDGFI 555
           +   G +
Sbjct: 535 LCSRGLV 541


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 193/690 (27%), Positives = 307/690 (44%), Gaps = 78/690 (11%)

Query: 92  LLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVV 151
           L+V VL+ ++  P + ++FF W   Q G      V+  +LE+L   G  R     +  + 
Sbjct: 131 LVVDVLSLVK-NPELGVKFFIWAGRQIGYGHTGPVYHALLEVLGCGGNDRVPEQFLREIR 189

Query: 152 CVNMHGILDVLIGGGLSSCVSIKILDLLL--LIYTKKSMVEQCLLVFNKMLRNGLLPDVK 209
             +   IL  L+   +  C    + ++ L  L   K    +   L +N ++R  L  D  
Sbjct: 190 DEDKE-ILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRL 248

Query: 210 NCNRII-KVLRDNGFSVKA----------------REVYRMMGEFGIKPSIVTYNTMLDS 252
           +   ++ + + D+GF++                  RE   ++ +   K   V Y  M+  
Sbjct: 249 DTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISG 308

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
            C+    +EA++ L  M+   C PN VTY +L+ G  R  +L + + ++  M+  G   S
Sbjct: 309 LCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPS 368

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG--------------- 357
              +N +I  Y   G    A  L ++M   G  P    YNILI G               
Sbjct: 369 RRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLEL 428

Query: 358 --------------------------LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
                                     LC  G+   A     EM+ K  IPD  +Y+ ++ 
Sbjct: 429 AEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIG 488

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
             C +  +  AFLLF+E++S ++VP V TY  LID  C+ G L+ A++  + M+  G  P
Sbjct: 489 LLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAP 548

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           +V+TYT +++   K   +S A E F  ML +G  P+   YT  I G  K G   +A ++ 
Sbjct: 549 NVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIY 608

Query: 512 EEMLAKGFPPD----------------LITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
             M      PD                + TY  LV GLCK   ++EA +LL  M  +G  
Sbjct: 609 ARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCE 668

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           P+HI Y ++I    ++G L   + +F  M  +G  P + TY+ LI       RL+LA   
Sbjct: 669 PNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKV 728

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
            S M      PNVI Y  +I+GLC++ + D+AY L   MEE+G  PN  TYT +I+    
Sbjct: 729 LSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGK 788

Query: 676 AGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           AG   + L L ++M  +   P++ T+  L+
Sbjct: 789 AGKVDKCLELMRQMGAKGCAPNFVTYRVLI 818



 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 159/532 (29%), Positives = 261/532 (49%), Gaps = 32/532 (6%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRII--KVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + S+ E+ +   ++M  +  +P+V    RI+    LR      + + +  MM   G  PS
Sbjct: 311 EASLFEEAMDFLSRMRSSSCIPNVVT-YRILLCGCLRKRQLG-RCKRILSMMITEGCYPS 368

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL-------- 294
              +N+++ ++C+ G+   A +LL +M   GC P  V YN+LI G   N +L        
Sbjct: 369 RRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLEL 428

Query: 295 -EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
            E+A G + D   +  KV+  +    +CG    G   +A ++  EM+++G  P  +TY+ 
Sbjct: 429 AEKAYGEMLDAHVVLNKVNVSNLARCLCG---AGKFEKAYSIIREMMSKGFIPDTSTYSK 485

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           +I  LC   +V +A   F EM   +V+PD+ +Y  L+  +C+ G + +A   FDE+    
Sbjct: 486 VIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDG 545

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
             P VVTY  LI    +   +  A +L E M+++G +P+V+TYT +++G CK G +  A 
Sbjct: 546 CAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKAC 605

Query: 474 EFFNEMLRKGLQPDR----------------FAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
           + +  M      PD                 F Y   + G  K     EA  L + M  +
Sbjct: 606 QIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVE 665

Query: 518 GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
           G  P+ I Y+ L+ G CK+G L+EA  +  KM   G+ P+  TY+S+I    +   L   
Sbjct: 666 GCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLA 725

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
             + + ML    +P ++ YT +I      G+ + A+   S M+ KG  PNV+TY A+I+G
Sbjct: 726 LKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDG 785

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
             +  ++D+   L   M  +G  PN  TY +LIN  C AG   +A +L  EM
Sbjct: 786 FGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEM 837



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 173/634 (27%), Positives = 284/634 (44%), Gaps = 66/634 (10%)

Query: 112 RWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCV 171
           RW E    ++++EF   T++   + SGL  ++ +             +D L     SSC+
Sbjct: 282 RWREALALIEKEEFKLDTVIYTQMISGLCEASLF----------EEAMDFLSRMRSSSCI 331

Query: 172 -SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV 230
            ++    +LL    +K  + +C  + + M+  G  P  +  N +I     +G    A ++
Sbjct: 332 PNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKL 391

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQ--EALELLWEMQGRGCSPNGVTYNVLITGF 288
            + MG+ G +P  V YN ++   C   ++   + LEL  +  G     + V   V ++  
Sbjct: 392 LKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNL 451

Query: 289 SR----NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           +R     G+ E+A  +IR+M+  G      +Y+ +I        +  A  L EEM +  V
Sbjct: 452 ARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHV 511

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
            P + TY ILI   CK G +  AR  F EM+R    P++++Y  L++ Y ++  +  A  
Sbjct: 512 VPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANE 571

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV----------- 453
           LF+ + S   +P VVTY  LIDG C+ G +E A Q+   M     +PDV           
Sbjct: 572 LFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNI 631

Query: 454 -----ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
                 TY  +V+G CK   +  AR+  + M  +G +P+   Y   I G  K+G   EA 
Sbjct: 632 RDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQ 691

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
            +  +M  +G+ P++ TY+ L+  L K   L+ A ++L +M+ +   P+ I YT +I   
Sbjct: 692 MVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGL 751

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
            ++G       L + M  KG  P +VTYT +I      G+++       +M  KG  PN 
Sbjct: 752 CKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNF 811

Query: 629 ITYNALINGLCRLRRIDQAY---------------------------------GLFIDME 655
           +TY  LIN  C    +D A+                                 GL  ++ 
Sbjct: 812 VTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIA 871

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           E   +P    Y ILI+  C AG  + AL L+KEM
Sbjct: 872 ENVAVPIIPAYRILIDSFCKAGRLELALELHKEM 905



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 152/517 (29%), Positives = 247/517 (47%), Gaps = 26/517 (5%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           E+   +  +M+  G +PD    +++I +L +      A  ++  M    + P + TY  +
Sbjct: 462 EKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTIL 521

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           +DSFCK G +Q+A +   EM   GC+PN VTY  LI  + +  ++  A  L   ML  G 
Sbjct: 522 IDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGC 581

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA------------------PTLATY 351
             +  +Y  +I G+ + G + +A  +   M  RG A                  P + TY
Sbjct: 582 IPNVVTYTALIDGHCKSGQIEKACQIYARM--RGNADIPDVDMYFKIDDGNIRDPNIFTY 639

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
             L+ GLCK  +V +AR     M  +   P+ I Y+ L+ G+C+ G + EA ++F ++  
Sbjct: 640 GALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSE 699

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           R   P V TY++LID L +   L++A ++   M+     P+VI YT M++G CK+G    
Sbjct: 700 RGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDE 759

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A    + M  KG  P+   YT  I G  K G   +   L  +M AKG  P+ +TY VL++
Sbjct: 760 AYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLIN 819

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHIT-YTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
             C  G L++A++LL +M    + P H+  Y  +I        +  G  L + +      
Sbjct: 820 HCCAAGLLDDAHQLLDEM-KQTYWPKHMAGYRKVIEGFNREFIISLG--LLDEIAENVAV 876

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQ--VKGIRPNVITYNALINGLCRLRRIDQAY 648
           P +  Y +LI +    GRLELA     EM         +   Y++LI  L    ++D+A+
Sbjct: 877 PIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAF 936

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
            L+ DM + G +P    +  L+        W+EAL+L
Sbjct: 937 ELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQL 973


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 155/458 (33%), Positives = 241/458 (52%), Gaps = 11/458 (2%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G  P + TY  ++ + C E  + EA + L EM  R  +PN VTY VLI G  + G +++A
Sbjct: 41  GFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEA 100

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L+  M K  +  +A +YN +I G  +     EA +L EEMV  G  P + TY  LI G
Sbjct: 101 VALLSKMRKKCVP-TAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITG 159

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL-RSRNLVP 416
            CK  +  DA   F +++ +   PD+++Y+ L+ G C+ G + EA  LF  + +S + +P
Sbjct: 160 FCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMP 219

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
             VTYN+LI G CR G ++ A  L E M   G  PDV+TYT ++NG CK+  L  A +  
Sbjct: 220 NTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLL 279

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           N+M RKGL PD   +T+ + G  +    S+A  +  EM  K   P + TYN ++ G C+ 
Sbjct: 280 NQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRA 339

Query: 537 GSLEEANE-LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
             LEEA + +L +M      P+ +++  +I    ++       +L     R+  +P +V 
Sbjct: 340 NQLEEARKFMLEEM---DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVM 396

Query: 596 YTVLIHAHAARGRLELAFMYFSEM-QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           YT +I       +++ A   + +M +  G  PN ITY+ LI GLC    +D+A G     
Sbjct: 397 YTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYI--- 453

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
            E+G +PN  TY +LI+    A   ++A  L  +M+ R
Sbjct: 454 -EKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQR 490



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 155/477 (32%), Positives = 244/477 (51%), Gaps = 11/477 (2%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   +EQ L+   KM+  G  PDV     +I  L       +AR+    M    + P++V
Sbjct: 23  KVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVV 82

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY  ++D  CK G + EA+ LL +M+ + C P  VTYN LI+G  +     +A  L+ +M
Sbjct: 83  TYTVLIDGLCKGGRVDEAVALLSKMR-KKCVPTAVTYNSLISGLCKAERASEAYDLLEEM 141

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           +  G      +Y  +I G+ +     +AL + E++V RG  P + TY+ LI GLCK GR+
Sbjct: 142 VYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRL 201

Query: 365 SDARHRFFEMLRK-NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
            +A   F  M++  + +P+ ++YN+L+ G+CR G + EA  L + +      P VVTY T
Sbjct: 202 KEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTT 261

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           L++G C+   L+ A  L   M  +G+ PDV+T+T +++G C+   LS A     EM RK 
Sbjct: 262 LMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKS 321

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQ-EEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
             P  + Y T + G  +     EA +   EEM     PP+++++N+++ GLCK+    EA
Sbjct: 322 CSPTVYTYNTILDGYCRANQLEEARKFMLEEM---DCPPNVVSFNIMIRGLCKVNRSSEA 378

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK-GLSPTLVTYTVLIH 601
            EL+ +       PD + YT++I        +     ++  ML + G  P  +TY+ LI 
Sbjct: 379 MELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLIT 438

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
                G L+ A  Y      KG  PN+ TYN LI+   +  R + A  L  DM + G
Sbjct: 439 GLCNAGMLDRARGYIE----KGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 145/435 (33%), Positives = 227/435 (52%), Gaps = 7/435 (1%)

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
           CS + VTY  LI G  +   LEQA   +  M+  G     ++Y  +I     +  L EA 
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
              EEM  R + P + TY +LI GLCK GRV +A     +M RK  +P  ++YN+L+ G 
Sbjct: 67  KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGL 125

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
           C++    EA+ L +E+     +P + TY TLI G C+    + A ++ E ++ +G  PDV
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKG-LQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
           +TY+ +++G CK G L  A + F  M++ G   P+   Y + I+G  ++G   EA  L E
Sbjct: 186 VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE 245

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
            M   G  PD++TY  L++G CKL  L++A +LL +M   G  PD +T+TS++       
Sbjct: 246 RMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCREN 305

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY-FSEMQVKGIRPNVITY 631
            L     +   M RK  SPT+ TY  ++  +    +LE A  +   EM      PNV+++
Sbjct: 306 RLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCP---PNVVSF 362

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           N +I GLC++ R  +A  L  +       P+   YT +I+  C      EA R+Y++ML+
Sbjct: 363 NIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLE 422

Query: 692 RE-IEPDYCTHSALL 705
                P+  T+S L+
Sbjct: 423 EPGCLPNSITYSTLI 437



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 150/452 (33%), Positives = 226/452 (50%), Gaps = 5/452 (1%)

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
           M+         VTY +++   CK   +++AL  L +M  +G  P+  TY  +I       
Sbjct: 1   MVATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVEN 60

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
            L +AR  + +M    L  +  +Y  +I G  + G + EA+ L  +M  + V PT  TYN
Sbjct: 61  RLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYN 119

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
            LI GLCK  R S+A     EM+    IPDI +Y TL+ G+C+S    +A  +F++L +R
Sbjct: 120 SLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVAR 179

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG-ILPDVITYTIMVNGSCKMGNLSM 471
              P VVTY+ LIDGLC+ G L+ A  L   MI  G  +P+ +TY  +++G C+MG +  
Sbjct: 180 GFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDE 239

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A      M   G  PD   YTT + G  KL    +AY L  +M  KG  PD++T+  L+ 
Sbjct: 240 AMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMD 299

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           GLC+   L +A  +L +M      P   TY +I+        L   R     +      P
Sbjct: 300 GLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPP 357

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
            +V++ ++I       R   A     E + +   P+V+ Y  +I+GLCR +++D+A  ++
Sbjct: 358 NVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVY 417

Query: 652 IDM-EEEGILPNKYTYTILINENCNAGNWQEA 682
             M EE G LPN  TY+ LI   CNAG    A
Sbjct: 418 RKMLEEPGCLPNSITYSTLITGLCNAGMLDRA 449



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 124/354 (35%), Positives = 194/354 (54%), Gaps = 2/354 (0%)

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
           + T   +    TY  LI GLCK  R+  A     +M+ K   PD+ +Y  +++  C    
Sbjct: 2   VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           + EA    +E+ +RNL P VVTY  LIDGLC+ G ++ A  L   M  +  +P  +TY  
Sbjct: 62  LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNS 120

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           +++G CK    S A +   EM+  G  PD F YTT I G  K   + +A R+ E+++A+G
Sbjct: 121 LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG 180

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG-FIPDHITYTSIIHASLEMGDLRRG 577
           F PD++TY+ L+ GLCK G L+EA +L  +M+  G  +P+ +TY S+I     MG +   
Sbjct: 181 FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEA 240

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
            +L   M   G SP +VTYT L++      RL+ A+   ++M  KG+ P+V+T+ +L++G
Sbjct: 241 MNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDG 300

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           LCR  R+  A  +  +M  +   P  YTY  +++  C A   +EA +   E +D
Sbjct: 301 LCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD 354



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 121/364 (33%), Positives = 193/364 (53%), Gaps = 12/364 (3%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +  +M+ +G +PD+     +I     +  S  A  V+  +   G +P +VTY+ ++D  C
Sbjct: 137 LLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLC 196

Query: 255 KEGEMQEALELLWEMQGRG-CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           KEG ++EA++L   M   G C PN VTYN LI+GF R G++++A  L+  M + G     
Sbjct: 197 KEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDV 256

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
            +Y  ++ G+ +   L +A +L  +M  +G+ P + T+  L+ GLC+  R+SDA H   E
Sbjct: 257 VTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGE 316

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M RK+  P + +YNT+L GYCR+  + EA      L   +  P VV++N +I GLC+   
Sbjct: 317 MRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNR 374

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK-GLQPDRFAYT 492
              A +L E    +   PDV+ YT +++G C+   +  A   + +ML + G  P+   Y+
Sbjct: 375 SSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYS 434

Query: 493 TQIAGELKLG--DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           T I G    G  D +  Y      + KG  P++ TYN+L+    K    E+A ELL  MV
Sbjct: 435 TLITGLCNAGMLDRARGY------IEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMV 488

Query: 551 GDGF 554
             GF
Sbjct: 489 QRGF 492



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/343 (30%), Positives = 179/343 (52%), Gaps = 8/343 (2%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMGEF 237
           L+  + K    +  L VF +++  G  PDV   + +I  L   G   +A +++ RM+   
Sbjct: 156 LITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSG 215

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
              P+ VTYN+++  FC+ G+M EA+ LL  M   G SP+ VTY  L+ GF +   L+ A
Sbjct: 216 SCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDA 275

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L+  M + GL     ++  ++ G   +  L +A+++  EM  +  +PT+ TYN ++ G
Sbjct: 276 YDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDG 335

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
            C+  ++ +AR    E +  +  P+++S+N ++ G C+     EA  L +E R R   P 
Sbjct: 336 YCRANQLEEARKFMLEEM--DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPD 393

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQ-GILPDVITYTIMVNGSCKMGNLSMAREFF 476
           VV Y T+IDGLCR   ++ A ++   M+ + G LP+ ITY+ ++ G C  G L  AR + 
Sbjct: 394 VVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGY- 452

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
              + KG  P+   Y   I    K     +A  L ++M+ +GF
Sbjct: 453 ---IEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGF 492



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 93/270 (34%), Positives = 137/270 (50%), Gaps = 7/270 (2%)

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           D +TYT ++ G CK+  L  A  F  +M+ KG  PD + YT  I          EA +  
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
           EEM  +   P+++TY VL+ GLCK G ++EA  LL KM     +P  +TY S+I    + 
Sbjct: 70  EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGLCKA 128

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
                  DL   M+  G  P + TYT LI       + + A   F ++  +G RP+V+TY
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEG-ILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           + LI+GLC+  R+ +A  LF  M + G  +PN  TY  LI+  C  G   EA+ L + M 
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248

Query: 691 DREIEPDYCTHSALL-----LKQLDKDYKV 715
           +    PD  T++ L+     L +LD  Y +
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDL 278


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 165/524 (31%), Positives = 248/524 (47%), Gaps = 38/524 (7%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           PD      +I+VL D G    A  +   M   G +P++VTY  +L++ CK    ++A+ +
Sbjct: 140 PDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAV 199

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG--- 322
           L EM+ +GC+PN VTYNV+I G  R G ++ AR L+  +   G +    SY  ++ G   
Sbjct: 200 LDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCA 259

Query: 323 --------------------------------YSEKGLLVEALNLEEEMVTRGVAPTLAT 350
                                           +   G++  A+ + ++M     A     
Sbjct: 260 SKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTL 319

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
            NI+I  +CK GRV DA      M      PD ISY T+L G CR+    +A  L  E+ 
Sbjct: 320 CNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMV 379

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
             N  P  VT+NT I  LC+ G +E A  L E M   G    V+TY  +VNG C  G++ 
Sbjct: 380 RNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHID 439

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            A E F  M  K   P+   YTT + G         A  L  EML +  PP+++T+NVLV
Sbjct: 440 SALELFRSMPCK---PNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLV 496

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
           +  C+ G L+EA EL+ +M+  G  P+ ITY ++     +        +L + ++ KG+S
Sbjct: 497 NFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVS 556

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           P ++T++ +I   +   R+E A   F   Q  G+RP  + YN ++ GLC+   ID A   
Sbjct: 557 PDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDF 616

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
              M   G +PN+ TY ILI      G  +EA  L   +  R +
Sbjct: 617 LAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGV 660



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 152/505 (30%), Positives = 247/505 (48%), Gaps = 6/505 (1%)

Query: 201 RNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQ 260
           R+G  PDV  C ++I+ L   G +  A  V R     G    +  YNT++  +C+ G + 
Sbjct: 68  RDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLD 127

Query: 261 EALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII 320
            A  L+  M     +P+  TY  LI      G +  A  L+ DML+ G + +  +Y  ++
Sbjct: 128 AARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLL 184

Query: 321 CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
               +     +A+ + +EM  +G  P + TYN++I G+C+ GRV DAR     +      
Sbjct: 185 EAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQ 244

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           PD +SY TLL G C S    +   LF E+  +N +P  VT++ LI   CR G +E A Q+
Sbjct: 245 PDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQV 304

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
            + M       +     I++N  CK G +  A +F N M   G  PD  +YTT + G  +
Sbjct: 305 LQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCR 364

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
               ++A  L +EM+    PP+ +T+N  +  LC+ G +E+A  L+ +M   G     +T
Sbjct: 365 AERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVT 424

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           Y ++++     G +    +LF +M  K   P  +TYT L+       RL+ A    +EM 
Sbjct: 425 YNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDAAAELVAEML 481

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
            +   PNV+T+N L+N  C+   +D+A  L   M E G  PN  TY  L +      + +
Sbjct: 482 HRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSE 541

Query: 681 EALRLYKEMLDREIEPDYCTHSALL 705
           +AL L   ++ + + PD  T S+++
Sbjct: 542 DALELLHGLVSKGVSPDVITFSSII 566



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 136/493 (27%), Positives = 236/493 (47%), Gaps = 6/493 (1%)

Query: 213 RIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR 272
           R+ +++     +  AR V       G  P +     ++ + C+ G   +A  +L   +G 
Sbjct: 45  RLRRLIAREDLAGAARLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGS 104

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA 332
           G   +   YN L+ G+ R G L+ AR LI  M    +   A++Y P+I    ++G + +A
Sbjct: 105 GSPVDVFAYNTLVAGYCRYGHLDAARRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADA 161

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
           L+L ++M+ RG  P + TY +L+  +CK      A     EM  K   P+I++YN ++ G
Sbjct: 162 LSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIING 221

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
            CR G + +A  L + L S    P  V+Y TL+ GLC     +  ++L   M+ +  +P+
Sbjct: 222 MCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPN 281

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
            +T+ +++   C+ G +  A +   +M       +       I    K G   +A++   
Sbjct: 282 EVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLN 341

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
            M + G  PD I+Y  ++ GLC+     +A ELL++MV +   P+ +T+ + I    + G
Sbjct: 342 NMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKG 401

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
            + +   L   M   G +  +VTY  L++    +G ++ A   F  M  K   PN ITY 
Sbjct: 402 LIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITYT 458

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
            L+ GLC   R+D A  L  +M      PN  T+ +L+N  C  G   EA+ L ++M++ 
Sbjct: 459 TLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEH 518

Query: 693 EIEPDYCTHSALL 705
              P+  T++ L 
Sbjct: 519 GCTPNLITYNTLF 531



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 138/452 (30%), Positives = 213/452 (47%), Gaps = 6/452 (1%)

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA 332
           G +P+      LI    R G    A  ++R     G  V   +YN ++ GY   G L  A
Sbjct: 70  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 129

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
             L   M    VAP   TY  LI  LC  GRV+DA     +MLR+   P++++Y  LL  
Sbjct: 130 RRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 186

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
            C++    +A  + DE+R++   P +VTYN +I+G+CR G ++ A+ L   + + G  PD
Sbjct: 187 MCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPD 246

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
            ++YT ++ G C         E F EM+ K   P+   +   I    + G    A ++ +
Sbjct: 247 TVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQ 306

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           +M       +    N++++ +CK G +++A + L  M   G  PD I+YT+++       
Sbjct: 307 QMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAE 366

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
                ++L   M+R    P  VT+   I     +G +E A M   +MQ  G    V+TYN
Sbjct: 367 RWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYN 426

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
           AL+NG C    ID A  LF  M  +   PN  TYT L+   CNA     A  L  EML R
Sbjct: 427 ALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDAAAELVAEMLHR 483

Query: 693 EIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           +  P+  T + L+     K +   A+E +E +
Sbjct: 484 DCPPNVVTFNVLVNFFCQKGFLDEAIELVEQM 515



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 111/384 (28%), Positives = 189/384 (49%), Gaps = 3/384 (0%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
            D+L+  + +  MVE+ + V  +M  +    +   CN +I  +   G    A +    MG
Sbjct: 285 FDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMG 344

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
            +G  P  ++Y T+L   C+     +A ELL EM    C PN VT+N  I    + G +E
Sbjct: 345 SYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIE 404

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
           QA  LI  M + G  V   +YN ++ G+  +G +  AL L   M  +   P   TY  L+
Sbjct: 405 QAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLL 461

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
            GLC   R+  A     EML ++  P+++++N L+  +C+ G + EA  L +++      
Sbjct: 462 TGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCT 521

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P ++TYNTL DG+ +    E A +L   ++++G+ PDVIT++ ++    K   +  A + 
Sbjct: 522 PNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQM 581

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
           F+     G++P    Y   + G  K  +   A      M++ G  P+  TY +L+ GL +
Sbjct: 582 FHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAR 641

Query: 536 LGSLEEANELLRKMVGDGFIPDHI 559
            G L+EA +LL  +   G +  ++
Sbjct: 642 EGLLKEAQDLLSMLCSRGVVSKNL 665



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 81/245 (33%), Positives = 119/245 (48%), Gaps = 3/245 (1%)

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           R G  PD +  T  I    + G TS+A R+       G P D+  YN LV G C+ G L+
Sbjct: 68  RDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLD 127

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
            A  L+  M      PD  TYT +I    + G +     L ++MLR+G  P +VTYTVL+
Sbjct: 128 AARRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLL 184

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
            A       E A     EM+ KG  PN++TYN +ING+CR  R+D A  L   +   G  
Sbjct: 185 EAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQ 244

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
           P+  +YT L+   C +  W +   L+ EM+++   P+  T   L+           A++ 
Sbjct: 245 PDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQV 304

Query: 721 LESLT 725
           L+ +T
Sbjct: 305 LQQMT 309


>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 867

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 180/685 (26%), Positives = 327/685 (47%), Gaps = 45/685 (6%)

Query: 87  VSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRS-AYW 145
           V D  ++  +L R R  P  AL++  WV+    +     VF  ++ IL  S      A  
Sbjct: 77  VDDAHVIEVLLGR-RNDPVSALQYCNWVKPLRSLCEGGDVFWVLIHILFSSPHTHDRASN 135

Query: 146 VVETVVCVNMHGILDVLIGGGLSSC------VSIKILDLLLLIYTKKSMVEQCLLVFNKM 199
           ++   V  N   I   ++   + S       +S +  + LL  Y +   ++  +  FN M
Sbjct: 136 LLVMFVSSNPTLIPSAMVNNLVDSSKRFDFELSSRAFNYLLNAYIRNRRMDYAVDCFNLM 195

Query: 200 LRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEM 259
           +   ++P V   N ++  L  +    +A+E+Y  M   G+    VT   ++ +  +E + 
Sbjct: 196 VDRNVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKP 255

Query: 260 QEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML-KLGLKVSAHSYNP 318
           +EA+++   +  RG  P+G+ +++ +    +  +L  A  L+R+M  K G+  S  +Y  
Sbjct: 256 EEAMKIFRRVMSRGAEPDGLLFSLAVQAACKMKDLVMALDLLREMREKGGVPASQETYTS 315

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           +I    ++G + EA+ +++EMV  G+  ++     LI G C    +  A   F  M  + 
Sbjct: 316 VIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEG 375

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG----------- 427
           + PD + ++ ++  +C++  + +A  ++  ++S  + P+ V  + +I G           
Sbjct: 376 LAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAAL 435

Query: 428 -----------------------LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
                                  LC+ G ++ A      M N+GI P+V+ Y  M+   C
Sbjct: 436 EIFNDSFETWIAHGFMCNKIFLLLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHC 495

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
           +M N+ +AR  F+EML KGLQP+ F Y+  I G  K  D   A+ +  +M+A  F  + +
Sbjct: 496 RMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEV 555

Query: 525 TYNVLVHGLCKLGSLEEANELLRKMVGDG-FIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
            YN +++GLCK+G   +A E+L+ ++ +  +     +Y SII    + GD     + +  
Sbjct: 556 IYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYRE 615

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           M   G+SP +VT+T LI+      R++LA     EM+ K ++ +V  Y ALI+G C+   
Sbjct: 616 MSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKND 675

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSA 703
           +  AY LF ++ E G++PN   Y  LI+   N G    A+ LYK+M++  I  D  T++ 
Sbjct: 676 MKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTT 735

Query: 704 LLLKQLDKDYKVHAVE-YLESLTLG 727
           ++   L     + A + Y E L LG
Sbjct: 736 MIDGLLKDGNLILASDLYSELLALG 760



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 172/612 (28%), Positives = 293/612 (47%), Gaps = 42/612 (6%)

Query: 91  ELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVF-------CTILEILIESGLLR-- 141
           +LL+R   R R KP  A++ FR V ++ G + D  +F       C + ++++   LLR  
Sbjct: 243 QLLMRASLRER-KPEEAMKIFRRVMSR-GAEPDGLLFSLAVQAACKMKDLVMALDLLREM 300

Query: 142 ---------SAYWVVETVVCV---NMH---GILDVLIGGGLSSCVSIKILDLLLLIYTKK 186
                       +    V CV   NM     + D ++G G+   +S+     L+  +   
Sbjct: 301 REKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIP--MSVIAATSLITGFCNG 358

Query: 187 SMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTY 246
           + + + L  FN+M   GL PD    + +I+    N    KA E+Y+ M   GI PS V  
Sbjct: 359 NELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLV 418

Query: 247 NTMLDSFCKEGEMQEALELL------WEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           + M+    K    + ALE+       W   G  C       N +     + G+++ A   
Sbjct: 419 HKMIQGCLKAESPEAALEIFNDSFETWIAHGFMC-------NKIFLLLCKQGKVDAATSF 471

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +R M   G++ +   YN ++  +     +  A ++  EM+ +G+ P   TY+ILI G  K
Sbjct: 472 LRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFK 531

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL-RSRNLVPTVV 419
                +A     +M+  N   + + YNT++ G C+ G   +A  +   L + +       
Sbjct: 532 NQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCT 591

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
           +YN++IDG  + GD + A +    M   GI P+V+T+T ++NG CK   + +A E  +EM
Sbjct: 592 SYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEM 651

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
             K L+ D  AY   I G  K  D   AY L  E+L  G  P++  YN L+ G   LG +
Sbjct: 652 KSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKM 711

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           + A +L +KMV DG   D  TYT++I   L+ G+L    DL++ +L  G+ P  + Y VL
Sbjct: 712 DAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVL 771

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           ++  + +G+   A     EM+ K   PNV+ Y+ +I G  R   +++A+ +  +M E+G+
Sbjct: 772 VNGLSKKGQFVRASKMLEEMKKKDATPNVLIYSTVIAGHHREGNLNEAFRVHDEMLEKGL 831

Query: 660 LPNKYTYTILIN 671
           + +   + +L++
Sbjct: 832 VHDDTIFNLLVS 843



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 139/500 (27%), Positives = 232/500 (46%), Gaps = 52/500 (10%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           AL FF  +E + G+  D+ +F  ++E   ++  +  A  + + +  V +     VL+   
Sbjct: 364 ALDFFNRMEEE-GLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGI-APSSVLVHKM 421

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
           +  C+  +  +  L I+            F   + +G +     CN+I  +L   G    
Sbjct: 422 IQGCLKAESPEAALEIFNDS---------FETWIAHGFM-----CNKIFLLLCKQGKVDA 467

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A    RMM   GI+P++V YN M+ + C+   M  A  +  EM  +G  PN  TY++LI 
Sbjct: 468 ATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILID 527

Query: 287 GFSRNGELEQARGLIRDML-------------------KLGLKVSAH------------- 314
           GF +N + + A  +I  M+                   K+G    A              
Sbjct: 528 GFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYS 587

Query: 315 ----SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
               SYN II G+ ++G    A+    EM   G++P + T+  LI G CK  R+  A   
Sbjct: 588 MGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEM 647

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
             EM  K++  D+ +Y  L+ G+C+  ++  A+ LF EL    L+P V  YN LI G   
Sbjct: 648 IHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRN 707

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
            G ++ A  L + M+N GI  D+ TYT M++G  K GNL +A + ++E+L  G+ PD   
Sbjct: 708 LGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEIL 767

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           Y   + G  K G    A ++ EEM  K   P+++ Y+ ++ G  + G+L EA  +  +M+
Sbjct: 768 YVVLVNGLSKKGQFVRASKMLEEMKKKDATPNVLIYSTVIAGHHREGNLNEAFRVHDEML 827

Query: 551 GDGFIPDHITYTSIIHASLE 570
             G + D   +  ++   +E
Sbjct: 828 EKGLVHDDTIFNLLVSGRVE 847


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 155/498 (31%), Positives = 257/498 (51%), Gaps = 1/498 (0%)

Query: 196 FNKML-RNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           FN++L +    P +    +I+  L  +        ++R M   GI   +V  + +++ F 
Sbjct: 59  FNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFS 118

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           + G+   +  +L ++   G  PN +T   LI G    G++ QA      ++ LG  ++  
Sbjct: 119 QLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKV 178

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           SY  +I G  + G    AL L   +  + V P +  YN +I  +CK   V++A   + EM
Sbjct: 179 SYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEM 238

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           + K + PD+++YN L+ G+C  G + +A  LF+++   N+ P V T+N L+DG C+   L
Sbjct: 239 VSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRL 298

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A+ +   M+ QGI PDV TY  +++  C +  ++ A+  FN + ++G+ P+  +Y+  
Sbjct: 299 KEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIM 358

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I G  K+    EA  L +EM      PD++TYN L+ GLCKLG +  A +L+ +M   G 
Sbjct: 359 IHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGV 418

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
             D ITY SI+ A  +   + +   L   M  +G+ P + TYT L+      GRLE A +
Sbjct: 419 PHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARI 478

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F ++ VKG   +V  Y A+I G C     D++  L   MEE G +PN  TY I+I    
Sbjct: 479 VFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLF 538

Query: 675 NAGNWQEALRLYKEMLDR 692
           +     +A +L +EM+ R
Sbjct: 539 DKDENDKAEKLLREMITR 556



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 144/497 (28%), Positives = 264/497 (53%), Gaps = 1/497 (0%)

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
           R++ +   KPSI  +  +L S  K       + L  +M+  G + + V  ++LI  FS+ 
Sbjct: 61  RLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQL 120

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G+   +  ++  +LK+G + +  +   +I G   KG + +AL   +++V  G      +Y
Sbjct: 121 GQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSY 180

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
             LI GLCK G+ S A      +  K V P+++ YNT++   C+   + EAF L+ E+ S
Sbjct: 181 GTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVS 240

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           + + P VVTYN LI G C  G ++ A  L   MI + I P+V T+ I+V+G CK   L  
Sbjct: 241 KGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKE 300

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A+     M+++G++PD F Y + +     + + ++A  +   +  +G  P++ +Y++++H
Sbjct: 301 AKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIH 360

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           G CK+  ++EA  L ++M  +  IPD +TY S+I    ++G +     L + M  +G+  
Sbjct: 361 GFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPH 420

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
             +TY  ++ A     +++ A    ++M+ +GI+P++ TY  L++GLC+  R++ A  +F
Sbjct: 421 DKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVF 480

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDK 711
            D+  +G + +   YT +I   C+ G + E+L L  +M +    P+  T+  ++    DK
Sbjct: 481 EDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDK 540

Query: 712 DYKVHAVEYL-ESLTLG 727
           D    A + L E +T G
Sbjct: 541 DENDKAEKLLREMITRG 557



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 139/463 (30%), Positives = 242/463 (52%)

Query: 198 KMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG 257
           +M  NG+  D+   + +I      G +  +  V   + + G +P+++T  T++   C +G
Sbjct: 97  QMEFNGITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKG 156

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
           ++ +AL+   ++   G   N V+Y  LI G  + G+   A  L+R +    ++ +   YN
Sbjct: 157 QIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYN 216

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            II    +  L+ EA +L  EMV++G++P + TYN LI G C  G++ DA   F +M+ +
Sbjct: 217 TIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFE 276

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
           N+ P++ ++N L+ G+C+   + EA  +   +  + + P V TYN+L+D  C   ++  A
Sbjct: 277 NINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKA 336

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
           + +   +  +G+ P++ +Y+IM++G CK+  +  A   F EM    + PD   Y + I G
Sbjct: 337 KHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDG 396

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
             KLG  S A +L +EM  +G P D ITYN ++  LCK   +++A  LL KM  +G  PD
Sbjct: 397 LCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPD 456

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
             TYT+++    + G L   R +F ++L KG    +  YT +I    + G  + +    S
Sbjct: 457 ICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLS 516

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
           +M+  G  PN +TY  +I  L      D+A  L  +M   G+ 
Sbjct: 517 KMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGLF 559



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 131/404 (32%), Positives = 225/404 (55%)

Query: 186 KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVT 245
           K  + Q L   +K++  G   +  +   +I  L   G +  A ++ R +    ++P++V 
Sbjct: 155 KGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVM 214

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           YNT++DS CK   + EA +L  EM  +G SP+ VTYN LI+GF   G+++ A  L   M+
Sbjct: 215 YNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMI 274

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
              +  + +++N ++ G+ ++  L EA N+   M+ +G+ P + TYN L+   C    V+
Sbjct: 275 FENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVN 334

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
            A+H F  + ++ V P+I SY+ +++G+C+   + EA  LF E+   N++P VVTYN+LI
Sbjct: 335 KAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLI 394

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           DGLC+ G +  A +L + M ++G+  D ITY  +++  CK   +  A     +M  +G+Q
Sbjct: 395 DGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQ 454

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           PD   YTT + G  K G   +A  + E++L KG+  D+  Y  ++ G C  G  +E+ +L
Sbjct: 455 PDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDL 514

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           L KM  +G IP+ +TY  II +  +  +  +   L   M+ +GL
Sbjct: 515 LSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 129/450 (28%), Positives = 229/450 (50%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           IL +L+  +++         V  K+L+ G  P+V     +IK L   G   +A + +  +
Sbjct: 109 ILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKV 168

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
              G   + V+Y T+++  CK G+   AL+LL  + G+   PN V YN +I    +   +
Sbjct: 169 VALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLV 228

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
            +A  L  +M+  G+     +YN +I G+   G + +A +L  +M+   + P + T+NIL
Sbjct: 229 NEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNIL 288

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           + G CK  R+ +A++    M+++ + PD+ +YN+L+  YC    + +A  +F+ +  R +
Sbjct: 289 VDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGV 348

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P + +Y+ +I G C+   ++ A  L + M    I+PDV+TY  +++G CK+G +S A +
Sbjct: 349 NPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALK 408

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
             +EM  +G+  D+  Y + +    K     +A  L  +M  +G  PD+ TY  LV GLC
Sbjct: 409 LVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLC 468

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           K G LE+A  +   ++  G+I D   YT++I      G      DL + M   G  P  V
Sbjct: 469 KNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAV 528

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
           TY ++I +   +   + A     EM  +G+
Sbjct: 529 TYEIIICSLFDKDENDKAEKLLREMITRGL 558



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 115/231 (49%), Gaps = 1/231 (0%)

Query: 476 FNEML-RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
           FN +L +K  +P  F +   +   +K    S    L  +M   G   DL+  ++L++   
Sbjct: 59  FNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFS 118

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           +LG    +  +L K++  G+ P+ IT T++I      G + +     + ++  G     V
Sbjct: 119 QLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKV 178

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           +Y  LI+     G+   A      +  K ++PNV+ YN +I+ +C+++ +++A+ L+ +M
Sbjct: 179 SYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEM 238

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             +GI P+  TY  LI+  C  G  ++A  L+ +M+   I P+  T + L+
Sbjct: 239 VSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILV 289


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 154/458 (33%), Positives = 241/458 (52%), Gaps = 11/458 (2%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G  P + TY  ++ + C E  + EA + L EM  R  +PN VTY VLI G  + G +++A
Sbjct: 41  GFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEA 100

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L+  M K  +  +A +YN +I G  +     EA +L EEMV  G  P + TY  LI G
Sbjct: 101 VALLSKMRKKCVP-TAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITG 159

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL-RSRNLVP 416
            CK  +  DA   F +++ +   PD+++Y+ L+ G C+ G + EA  LF  + +S + +P
Sbjct: 160 FCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMP 219

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
             VTYN+LI G CR G ++ A  L E M   G  PDV+TYT ++NG CK+  L  A +  
Sbjct: 220 NTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLL 279

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           N+M RKGL PD   +T+ + G  +    S+A  +  EM  K   P + TYN ++ G C+ 
Sbjct: 280 NQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRA 339

Query: 537 GSLEEANE-LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
             LEEA + +L +M      P+ +++  +I    ++       +L     R+  +P +V 
Sbjct: 340 NQLEEARKFMLEEM---DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVM 396

Query: 596 YTVLIHAHAARGRLELAFMYFSEM-QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           YT +I       +++ A   + +M +  G  PN ITY+ L+ GLC    +D+A G     
Sbjct: 397 YTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYI--- 453

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
            E+G +PN  TY +LI+    A   ++A  L  +M+ R
Sbjct: 454 -EKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQR 490



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 154/477 (32%), Positives = 244/477 (51%), Gaps = 11/477 (2%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   +EQ L+   KM+  G  PDV     +I  L       +AR+    M    + P++V
Sbjct: 23  KVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVV 82

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY  ++D  CK G + EA+ LL +M+ + C P  VTYN LI+G  +     +A  L+ +M
Sbjct: 83  TYTVLIDGLCKGGRVDEAVALLSKMR-KKCVPTAVTYNSLISGLCKAERASEAYDLLEEM 141

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           +  G      +Y  +I G+ +     +AL + E++V RG  P + TY+ LI GLCK GR+
Sbjct: 142 VYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRL 201

Query: 365 SDARHRFFEMLRK-NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
            +A   F  M++  + +P+ ++YN+L+ G+CR G + EA  L + +      P VVTY T
Sbjct: 202 KEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTT 261

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           L++G C+   L+ A  L   M  +G+ PDV+T+T +++G C+   LS A     EM RK 
Sbjct: 262 LMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKS 321

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQ-EEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
             P  + Y T + G  +     EA +   EEM     PP+++++N+++ GLCK+    EA
Sbjct: 322 CSPTVYTYNTILDGYCRANQLEEARKFMLEEM---DCPPNVVSFNIMIRGLCKVNRSSEA 378

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK-GLSPTLVTYTVLIH 601
            EL+ +       PD + YT++I        +     ++  ML + G  P  +TY+ L+ 
Sbjct: 379 MELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVT 438

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
                G L+ A  Y      KG  PN+ TYN LI+   +  R + A  L  DM + G
Sbjct: 439 GLCNAGMLDRARGYIE----KGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491



 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 145/435 (33%), Positives = 227/435 (52%), Gaps = 7/435 (1%)

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
           CS + VTY  LI G  +   LEQA   +  M+  G     ++Y  +I     +  L EA 
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
              EEM  R + P + TY +LI GLCK GRV +A     +M RK  +P  ++YN+L+ G 
Sbjct: 67  KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGL 125

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
           C++    EA+ L +E+     +P + TY TLI G C+    + A ++ E ++ +G  PDV
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKG-LQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
           +TY+ +++G CK G L  A + F  M++ G   P+   Y + I+G  ++G   EA  L E
Sbjct: 186 VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE 245

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
            M   G  PD++TY  L++G CKL  L++A +LL +M   G  PD +T+TS++       
Sbjct: 246 RMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCREN 305

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY-FSEMQVKGIRPNVITY 631
            L     +   M RK  SPT+ TY  ++  +    +LE A  +   EM      PNV+++
Sbjct: 306 RLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCP---PNVVSF 362

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           N +I GLC++ R  +A  L  +       P+   YT +I+  C      EA R+Y++ML+
Sbjct: 363 NIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLE 422

Query: 692 RE-IEPDYCTHSALL 705
                P+  T+S L+
Sbjct: 423 EPGCLPNSITYSTLV 437



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 149/452 (32%), Positives = 226/452 (50%), Gaps = 5/452 (1%)

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
           M+         VTY +++   CK   +++AL  L +M  +G  P+  TY  +I       
Sbjct: 1   MVATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVEN 60

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
            L +AR  + +M    L  +  +Y  +I G  + G + EA+ L  +M  + V PT  TYN
Sbjct: 61  RLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYN 119

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
            LI GLCK  R S+A     EM+    IPDI +Y TL+ G+C+S    +A  +F++L +R
Sbjct: 120 SLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVAR 179

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG-ILPDVITYTIMVNGSCKMGNLSM 471
              P VVTY+ LIDGLC+ G L+ A  L   MI  G  +P+ +TY  +++G C+MG +  
Sbjct: 180 GFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDE 239

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A      M   G  PD   YTT + G  KL    +AY L  +M  KG  PD++T+  L+ 
Sbjct: 240 AMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMD 299

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           GLC+   L +A  +L +M      P   TY +I+        L   R     +      P
Sbjct: 300 GLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPP 357

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
            +V++ ++I       R   A     E + +   P+V+ Y  +I+GLCR +++D+A  ++
Sbjct: 358 NVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVY 417

Query: 652 IDM-EEEGILPNKYTYTILINENCNAGNWQEA 682
             M EE G LPN  TY+ L+   CNAG    A
Sbjct: 418 RKMLEEPGCLPNSITYSTLVTGLCNAGMLDRA 449



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 124/354 (35%), Positives = 194/354 (54%), Gaps = 2/354 (0%)

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
           + T   +    TY  LI GLCK  R+  A     +M+ K   PD+ +Y  +++  C    
Sbjct: 2   VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           + EA    +E+ +RNL P VVTY  LIDGLC+ G ++ A  L   M  +  +P  +TY  
Sbjct: 62  LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNS 120

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           +++G CK    S A +   EM+  G  PD F YTT I G  K   + +A R+ E+++A+G
Sbjct: 121 LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG 180

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG-FIPDHITYTSIIHASLEMGDLRRG 577
           F PD++TY+ L+ GLCK G L+EA +L  +M+  G  +P+ +TY S+I     MG +   
Sbjct: 181 FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEA 240

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
            +L   M   G SP +VTYT L++      RL+ A+   ++M  KG+ P+V+T+ +L++G
Sbjct: 241 MNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDG 300

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           LCR  R+  A  +  +M  +   P  YTY  +++  C A   +EA +   E +D
Sbjct: 301 LCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD 354



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 120/364 (32%), Positives = 193/364 (53%), Gaps = 12/364 (3%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +  +M+ +G +PD+     +I     +  S  A  V+  +   G +P +VTY+ ++D  C
Sbjct: 137 LLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLC 196

Query: 255 KEGEMQEALELLWEMQGRG-CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           KEG ++EA++L   M   G C PN VTYN LI+GF R G++++A  L+  M + G     
Sbjct: 197 KEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDV 256

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
            +Y  ++ G+ +   L +A +L  +M  +G+ P + T+  L+ GLC+  R+SDA H   E
Sbjct: 257 VTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGE 316

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M RK+  P + +YNT+L GYCR+  + EA      L   +  P VV++N +I GLC+   
Sbjct: 317 MRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNR 374

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK-GLQPDRFAYT 492
              A +L E    +   PDV+ YT +++G C+   +  A   + +ML + G  P+   Y+
Sbjct: 375 SSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYS 434

Query: 493 TQIAGELKLG--DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           T + G    G  D +  Y      + KG  P++ TYN+L+    K    E+A ELL  MV
Sbjct: 435 TLVTGLCNAGMLDRARGY------IEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMV 488

Query: 551 GDGF 554
             GF
Sbjct: 489 QRGF 492



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/343 (31%), Positives = 179/343 (52%), Gaps = 8/343 (2%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMGEF 237
           L+  + K    +  L VF +++  G  PDV   + +I  L   G   +A +++ RM+   
Sbjct: 156 LITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSG 215

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
              P+ VTYN+++  FC+ G+M EA+ LL  M   G SP+ VTY  L+ GF +   L+ A
Sbjct: 216 SCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDA 275

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L+  M + GL     ++  ++ G   +  L +A+++  EM  +  +PT+ TYN ++ G
Sbjct: 276 YDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDG 335

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
            C+  ++ +AR    E +  +  P+++S+N ++ G C+     EA  L +E R R   P 
Sbjct: 336 YCRANQLEEARKFMLEEM--DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPD 393

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQ-GILPDVITYTIMVNGSCKMGNLSMAREFF 476
           VV Y T+IDGLCR   ++ A ++   M+ + G LP+ ITY+ +V G C  G L  AR + 
Sbjct: 394 VVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGY- 452

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
              + KG  P+   Y   I    K     +A  L ++M+ +GF
Sbjct: 453 ---IEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGF 492



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 93/270 (34%), Positives = 137/270 (50%), Gaps = 7/270 (2%)

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           D +TYT ++ G CK+  L  A  F  +M+ KG  PD + YT  I          EA +  
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
           EEM  +   P+++TY VL+ GLCK G ++EA  LL KM     +P  +TY S+I    + 
Sbjct: 70  EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGLCKA 128

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
                  DL   M+  G  P + TYT LI       + + A   F ++  +G RP+V+TY
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEG-ILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           + LI+GLC+  R+ +A  LF  M + G  +PN  TY  LI+  C  G   EA+ L + M 
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248

Query: 691 DREIEPDYCTHSALL-----LKQLDKDYKV 715
           +    PD  T++ L+     L +LD  Y +
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDL 278



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 5/107 (4%)

Query: 206 PDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALE 264
           PDV     +I  L R+       R   +M+ E G  P+ +TY+T++   C  G +  A  
Sbjct: 392 PDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARG 451

Query: 265 LLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKV 311
            +     +GC PN  TYN+LI  F +    E AR L+ DM++ G  V
Sbjct: 452 YIE----KGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGFGV 494


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  263 bits (672), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 190/691 (27%), Positives = 316/691 (45%), Gaps = 86/691 (12%)

Query: 89  DPELLVRVLNRIR-EKPRIALRFFRWVETQPGV--KRDEFVFCTILEILIESGLLRSAYW 145
           +PE+++ VL   R + P   L FF WV++Q     K D F F  +   L   G    A  
Sbjct: 61  NPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLAL--DLCNFGSFEKALS 118

Query: 146 VVETVVCVNMHGILDVLIGGGLSSCVSIK-----------ILDLLLLIYTKKSMVEQCLL 194
           VVE ++  N        +    SS V              +  +L   Y  K  +E+ + 
Sbjct: 119 VVERMIERNWP------VAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVF 172

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVL------------------RDNGFSVKARE------- 229
           VF+  +   L+P +  C  ++  L                  R+  F VK          
Sbjct: 173 VFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHC 232

Query: 230 -----------VYRMMGEF--------------------GIKPSIVTYNTMLDSFCKEGE 258
                      +++   EF                    G+ P   TY+ ++D  CK   
Sbjct: 233 RAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKR 292

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           +++A  LL EM   G S +  TY++LI G  +    + A+GL+ +M+  G+ +  + Y+ 
Sbjct: 293 LEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDC 352

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
            IC  S++G++ +A  L + M+  G+ P    Y  LI G C+   V        EM ++N
Sbjct: 353 CICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRN 412

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL---CRYGD-L 434
           ++    +Y T++ G C SG++  A+ +  E+ +    P VV Y TLI       R+GD +
Sbjct: 413 IVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAM 472

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
            V +++KE    QGI PD+  Y  ++ G  K   +  AR F  EM+  GL+P+ F Y   
Sbjct: 473 RVLKEMKE----QGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAF 528

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I+G ++  + + A +  +EM   G  P+ +    L++  CK   + EA    R MV  G 
Sbjct: 529 ISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGI 588

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
           + D  TYT +++   +   +    ++F  M  KG++P + +Y VLI+  +  G ++ A  
Sbjct: 589 LGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASS 648

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F EM  +G+ PNVI YN L+ G CR   I++A  L  +M  +G+ PN  TY  +I+  C
Sbjct: 649 IFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYC 708

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            +G+  EA RL+ EM  + + PD   ++ L+
Sbjct: 709 KSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 156/568 (27%), Positives = 272/568 (47%), Gaps = 46/568 (8%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDV-------------KNCNR---------- 213
           D  + + +K+ ++E+   +F+ M+ +GL+P               KN  +          
Sbjct: 351 DCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKK 410

Query: 214 ------------IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQE 261
                       ++K +  +G    A  + + M   G +P++V Y T++ +F +     +
Sbjct: 411 RNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGD 470

Query: 262 ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC 321
           A+ +L EM+ +G +P+   YN LI G S+   +++AR  + +M++ GLK +A +Y   I 
Sbjct: 471 AMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFIS 530

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           GY E      A    +EM   GV P       LI   CK  +V +A   +  M+ + ++ 
Sbjct: 531 GYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILG 590

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           D  +Y  L+ G  ++  + +A  +F E+R + + P V +Y  LI+G  + G+++ A  + 
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIF 650

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
           + M+ +G+ P+VI Y +++ G C+ G +  A+E  +EM  KGL P+   Y T I G  K 
Sbjct: 651 DEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKS 710

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL---RKMVGDGFIPDH 558
           GD +EA+RL +EM  KG  PD   Y  LV G C+L  +E A  +    +K       P  
Sbjct: 711 GDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAP-- 768

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS----PTLVTYTVLIHAHAARGRLELAFM 614
             + ++I+   + G      ++ N ++         P  VTY ++I      G LE A  
Sbjct: 769 --FNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKE 826

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F +MQ   + P VITY +L+NG  ++ R  + + +F +    GI P+   Y+++IN   
Sbjct: 827 LFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFL 886

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHS 702
             G   +AL L  +M  +    D C  S
Sbjct: 887 KEGMTTKALVLVDQMFAKNAVDDGCKLS 914



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 159/564 (28%), Positives = 272/564 (48%), Gaps = 26/564 (4%)

Query: 125 FVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSC-VSIKILDLLLLIY 183
           + + T+++ +  SG L  AY +V+ ++                S C  ++ I   L+  +
Sbjct: 418 YTYGTVVKGMCSSGDLDGAYNIVKEMIA---------------SGCRPNVVIYTTLIKTF 462

Query: 184 TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
            + S     + V  +M   G+ PD+   N +I  L       +AR     M E G+KP+ 
Sbjct: 463 LQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNA 522

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
            TY   +  + +  E   A + + EM+  G  PN V    LI  + +  ++ +A    R 
Sbjct: 523 FTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRS 582

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M+  G+   A +Y  ++ G  +   + +A  +  EM  +G+AP + +Y +LI G  K G 
Sbjct: 583 MVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           +  A   F EM+ + + P++I YN LL G+CRSG I +A  L DE+  + L P  VTY T
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           +IDG C+ GDL  A +L + M  +G++PD   YT +V+G C++ ++  A   F    +KG
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKG 761

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF----PPDLITYNVLVHGLCKLGSL 539
                  +   I    K G T     +   ++   F     P+ +TYN+++  LCK G+L
Sbjct: 762 CASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNL 821

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           E A EL  +M     +P  ITYTS+++   +MG       +F+  +  G+ P  + Y+V+
Sbjct: 822 EAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVI 881

Query: 600 IHAHAARGRLELAFMYFSEMQVK-----GIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           I+A    G    A +   +M  K     G + ++ T  AL++G  ++  ++ A  +  +M
Sbjct: 882 INAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENM 941

Query: 655 EEEGILPNKYTYTILINENCNAGN 678
                +P+  T   LINE+C + N
Sbjct: 942 VRLQYIPDSATVIELINESCISSN 965



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 116/425 (27%), Positives = 197/425 (46%), Gaps = 21/425 (4%)

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           GY  KG + EA+ +    +   + P L+   +L+  L +W R+      +  M+ +NV+ 
Sbjct: 160 GYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVF 219

Query: 382 DIISYNTLLYGYCRSGNI---------------------GEAFLLFDELRSRNLVPTVVT 420
           D+ +Y+ L+  +CR+GN+                       A  L + +  + LVP   T
Sbjct: 220 DVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYT 279

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y+ LIDGLC+   LE A+ L   M + G+  D  TY+++++G  K  N   A+   +EM+
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
             G+    + Y   I    K G   +A  L + M+A G  P    Y  L+ G C+  ++ 
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           +  ELL +M     +    TY +++      GDL    ++   M+  G  P +V YT LI
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                  R   A     EM+ +GI P++  YN+LI GL + +R+D+A    ++M E G+ 
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK 519

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
           PN +TY   I+    A  +  A +  KEM +  + P+    + L+ +   K+  + A   
Sbjct: 520 PNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSA 579

Query: 721 LESLT 725
             S+ 
Sbjct: 580 YRSMV 584


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  263 bits (672), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 151/497 (30%), Positives = 257/497 (51%), Gaps = 22/497 (4%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
             +++RNG L D              GF      VYR     G  P I+   +++  FC+
Sbjct: 121 LRRLVRNGELED--------------GFKFLESMVYR-----GDIPDIIPCTSLIRGFCR 161

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
            G+ ++A  ++  ++  G  P+ +TYNVLI+G+ ++GE++ A   ++ + ++ +     +
Sbjct: 162 IGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNA---LQVLDRMNVAPDVVT 218

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           YN I+    + G L +A+ + +  + +   P + TY ILI   CK   V  A     EM 
Sbjct: 219 YNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMR 278

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
            K   PD+++YN L+ G C+ G + EA    + + S    P V+T+N ++  +C  G   
Sbjct: 279 NKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWM 338

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            A++L  +M+ +G  P V+T+ I++N  C+ G L  A +   +M   G  P+  +Y   +
Sbjct: 339 DAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLL 398

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
            G  K      A    + M+++G  PD++TYN L+  LCK G ++ A E+L ++   G  
Sbjct: 399 HGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCS 458

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           P  ITY ++I    ++G   R   L + M RKGL P ++TY+ L+   +  G+++ A  +
Sbjct: 459 PVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKF 518

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
           F +++  GIRPN ITYN+++ GLC+ R+ D+A      M  +   P + TYTILI     
Sbjct: 519 FHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAY 578

Query: 676 AGNWQEALRLYKEMLDR 692
            G  +EAL L  E+  R
Sbjct: 579 EGLAKEALDLLNELCSR 595



 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 146/456 (32%), Positives = 240/456 (52%), Gaps = 3/456 (0%)

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           L    + GE+++  + L  M  RG  P+ +    LI GF R G+ ++A  ++  + + G 
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
                +YN +I GY + G +  AL + + M    VAP + TYN ++  LC  G++  A  
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAME 237

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
                L+K   PD+I+Y  L+   C+   +G+A  L DE+R++   P VVTYN LI+G+C
Sbjct: 238 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 297

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
           + G L+ A +   NM + G  P+VIT+ I++   C  G    A +  ++MLRKG  P   
Sbjct: 298 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 357

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
            +   I    + G    A  + E+M   G  P+ ++YN L+HG CK   ++ A E L  M
Sbjct: 358 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 417

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRL 609
           V  G  PD +TY +++ A  + G +    ++ N +  KG SP L+TY  +I   +  G+ 
Sbjct: 418 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKT 477

Query: 610 ELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL 669
           E A     EM+ KG++P++ITY++L++GL R  ++D+A   F D+E  GI PN  TY  +
Sbjct: 478 ERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSI 537

Query: 670 INENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +   C +     A+     M+ +  +P   T++ L+
Sbjct: 538 MLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILI 573



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 136/424 (32%), Positives = 221/424 (52%), Gaps = 3/424 (0%)

Query: 201 RNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQ 260
           ++G +PDV   N +I     +G    A +V   M    + P +VTYNT+L + C  G+++
Sbjct: 177 QSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLK 233

Query: 261 EALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII 320
           +A+E+L     + C P+ +TY +LI    +   + QA  L+ +M   G K    +YN +I
Sbjct: 234 QAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLI 293

Query: 321 CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
            G  ++G L EA+     M + G  P + T+NI++  +C  GR  DA     +MLRK   
Sbjct: 294 NGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCS 353

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           P ++++N L+   CR G +G A  + +++      P  ++YN L+ G C+   ++ A + 
Sbjct: 354 PSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEY 413

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
            + M+++G  PD++TY  ++   CK G + +A E  N++  KG  P    Y T I G  K
Sbjct: 414 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSK 473

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
           +G T  A +L +EM  KG  PD+ITY+ LV GL + G ++EA +    + G G  P+ IT
Sbjct: 474 VGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAIT 533

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           Y SI+    +     R  D    M+ K   PT  TYT+LI   A  G  + A    +E+ 
Sbjct: 534 YNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELC 593

Query: 621 VKGI 624
            +G+
Sbjct: 594 SRGL 597



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 130/432 (30%), Positives = 225/432 (52%), Gaps = 3/432 (0%)

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           RNGELE     +  M+  G          +I G+   G   +A  + E +   G  P + 
Sbjct: 126 RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVI 185

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           TYN+LI G CK G + +A      M   NV PD+++YNT+L   C SG + +A  + D  
Sbjct: 186 TYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 242

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
             +   P V+TY  LI+  C+   +  A +L + M N+G  PDV+TY +++NG CK G L
Sbjct: 243 LQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRL 302

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A +F N M   G QP+   +   +      G   +A +L  +ML KG  P ++T+N+L
Sbjct: 303 DEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNIL 362

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           ++ LC+ G L  A ++L KM   G  P+ ++Y  ++H   +   + R  +  + M+ +G 
Sbjct: 363 INFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 422

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
            P +VTY  L+ A    G++++A    +++  KG  P +ITYN +I+GL ++ + ++A  
Sbjct: 423 YPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIK 482

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQL 709
           L  +M  +G+ P+  TY+ L++     G   EA++ + ++    I P+  T+++++L   
Sbjct: 483 LLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLC 542

Query: 710 DKDYKVHAVEYL 721
                  A+++L
Sbjct: 543 KSRQTDRAIDFL 554



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/399 (31%), Positives = 204/399 (51%), Gaps = 5/399 (1%)

Query: 327 GLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISY 386
           G L +     E MV RG  P +     LI G C+ G+   A      + +   +PD+I+Y
Sbjct: 128 GELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITY 187

Query: 387 NTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMIN 446
           N L+ GYC+SG I  A  + D +   N+ P VVTYNT++  LC  G L+ A ++ +  + 
Sbjct: 188 NVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQ 244

Query: 447 QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSE 506
           +   PDVITYTI++  +CK   +  A +  +EM  KG +PD   Y   I G  K G   E
Sbjct: 245 KECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDE 304

Query: 507 AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
           A +    M + G  P++IT+N+++  +C  G   +A +LL  M+  G  P  +T+  +I+
Sbjct: 305 AIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILIN 364

Query: 567 ASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRP 626
                G L R  D+   M   G +P  ++Y  L+H      +++ A  Y   M  +G  P
Sbjct: 365 FLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYP 424

Query: 627 NVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLY 686
           +++TYN L+  LC+  ++D A  +   +  +G  P   TY  +I+     G  + A++L 
Sbjct: 425 DIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLL 484

Query: 687 KEMLDREIEPDYCTHSALLLKQLDKDYKV-HAVEYLESL 724
            EM  + ++PD  T+S+ L+  L ++ KV  A+++   L
Sbjct: 485 DEMRRKGLKPDIITYSS-LVSGLSREGKVDEAIKFFHDL 522



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 196/367 (53%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           ++Q + V ++ L+    PDV     +I+         +A ++   M   G KP +VTYN 
Sbjct: 232 LKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNV 291

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++  CKEG + EA++ L  M   GC PN +T+N+++      G    A  L+ DML+ G
Sbjct: 292 LINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKG 351

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
              S  ++N +I     +GLL  A+++ E+M   G  P   +YN L++G CK  ++  A 
Sbjct: 352 CSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAI 411

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
                M+ +   PDI++YNTLL   C+ G +  A  + ++L S+   P ++TYNT+IDGL
Sbjct: 412 EYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGL 471

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
            + G  E A +L + M  +G+ PD+ITY+ +V+G  + G +  A +FF+++   G++P+ 
Sbjct: 472 SKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNA 531

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             Y + + G  K   T  A      M++K   P   TY +L+ G+   G  +EA +LL +
Sbjct: 532 ITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNE 591

Query: 549 MVGDGFI 555
           +   G +
Sbjct: 592 LCSRGLV 598


>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 171/599 (28%), Positives = 287/599 (47%), Gaps = 48/599 (8%)

Query: 116 TQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKI 175
           ++ G+  DEF      + L + G  R A  ++E    V    + + +I G          
Sbjct: 268 SELGLSMDEFTLGFFAQALCKVGKWREALSLIEKEDFVPNTILYNKMISG---------- 317

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
                    + S  E+ +   N+M     +P+V+    ++    +     + + +  MM 
Sbjct: 318 -------LCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMI 370

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL- 294
             G  PS   +N+++ ++CK  +   A +LL +M+   C P  V YN+LI      GEL 
Sbjct: 371 AEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELP 430

Query: 295 -----EQARGLIRDMLKLGL---KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
                E A     +ML  G    KV+  S+   +CG+   G   +A  +  EM+  G  P
Sbjct: 431 GPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGF---GKFEKAYKVIHEMMGNGFVP 487

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
             +TY+ +I  LC   RV +A   F EM    V+PD+ +Y  L+  + ++G I +A    
Sbjct: 488 DTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWL 547

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
           DE+      PTVVTY TLI    +   + VA +L E MI +G  P+VITYT +++G CK 
Sbjct: 548 DEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKS 607

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           GN+  A + +  M                 G+  + D    ++++  +  K   P+++TY
Sbjct: 608 GNIEKACQIYARM----------------RGDADIPDVDMYFKIKNNVAEK---PNVVTY 648

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
             LV GLCK   +++A +LL  M  DG  P+ I Y ++I    +   L   +++F+ M+ 
Sbjct: 649 GALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVE 708

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
           +G +P + TY+ LI       RL+L     S+M      PN++ Y  +I+GL ++ + D+
Sbjct: 709 RGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDE 768

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           AY L + MEE+G  PN  TYT +I+    AG   + L L++EM  +   P++ T++ L+
Sbjct: 769 AYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLI 827



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 175/638 (27%), Positives = 300/638 (47%), Gaps = 72/638 (11%)

Query: 112 RWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCV 171
           +W E    +++++FV  TIL   + SGL  ++++             +D L     +SC+
Sbjct: 291 KWREALSLIEKEDFVPNTILYNKMISGLCEASFF----------EEAMDFLNRMRSTSCI 340

Query: 172 -SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV-LRDNGFSVKARE 229
            +++   +LL     K  + +C  + + M+  G  P     N ++    + + FS  A +
Sbjct: 341 PNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSY-AYK 399

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEM------------------------------ 259
           + + M +   KP  V YN ++ S C  GE+                              
Sbjct: 400 LLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVS 459

Query: 260 -----------QEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
                      ++A +++ EM G G  P+  TY+ +I        +E A  L ++M   G
Sbjct: 460 FARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTG 519

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           +    ++Y  +I  +S+ G++ +A N  +EMV  G  PT+ TY  LI+   K  +VS A 
Sbjct: 520 VVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVAN 579

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS-------------RNLV 415
             F  M+ K   P++I+Y  L+ GYC+SGNI +A  ++  +R              +N V
Sbjct: 580 ELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNV 639

Query: 416 ---PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
              P VVTY  L+DGLC+   ++ A+ L E M   G  P+ I Y  +++G CK   L  A
Sbjct: 640 AEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEA 699

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
           +E F++M+ +G  P+ + Y++ I    K        ++  +ML     P+++ Y  ++ G
Sbjct: 700 QEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDG 759

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           L K+   +EA +L+  M   G  P+ +TYT++I    + G + +  +LF  M  KG +P 
Sbjct: 760 LSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPN 819

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
            VTYTVLI+   A G L+ A+    EM+      +V +Y  +I G    R    + GL  
Sbjct: 820 FVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY--KREFILSLGLLE 877

Query: 653 DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           ++E+ G  P    Y +LI+    AG  + AL L+KE++
Sbjct: 878 EVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVI 915



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 152/524 (29%), Positives = 246/524 (46%), Gaps = 22/524 (4%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           E+   V ++M+ NG +PD    + +I  L +      A  +++ M   G+ P + TY  +
Sbjct: 471 EKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTIL 530

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           +D F K G +++A   L EM   GC P  VTY  LI  + +  ++  A  L   M+  G 
Sbjct: 531 IDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGC 590

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEM--------------VTRGVA--PTLATYNI 353
             +  +Y  +I GY + G + +A  +   M              +   VA  P + TY  
Sbjct: 591 FPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGA 650

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           L+ GLCK  +V DAR     M      P+ I Y+ L+ G+C++  + EA  +F ++  R 
Sbjct: 651 LVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERG 710

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
             P V TY++LID L +   L++  ++   M+     P+++ YT M++G  K+     A 
Sbjct: 711 YNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAY 770

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
           +    M  KG +P+   YT  I G  K G   +   L  EM +KG  P+ +TY VL++  
Sbjct: 771 KLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHC 830

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHI-TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           C  G L+EA  LL +M    + P H+ +Y  +I        L  G  L   + + G +PT
Sbjct: 831 CATGHLDEAYALLEEM-KQTYWPKHVSSYCKVIEGYKREFILSLG--LLEEVEKNGSAPT 887

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT--YNALINGLCRLRRIDQAYGL 650
           ++ Y VLI      GRLE+A     E+    +        Y +LI       +ID A+ L
Sbjct: 888 ILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFEL 947

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           F DM  +G++P+  T+  L+        W+EAL+L   +   +I
Sbjct: 948 FYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSLCQMDI 991



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 133/535 (24%), Positives = 212/535 (39%), Gaps = 57/535 (10%)

Query: 204 LLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEAL 263
           +L  ++NC        D+GF  K   V R   +  + P +V     + SF K  E+    
Sbjct: 110 ILDAIRNC--------DDGFGEKTHIVLRQFRQ-KLNPDLVV---EILSFLKSPELCVKF 157

Query: 264 ELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGY 323
             LW  +  G       Y  L+  F R          +R++     +V     N +I   
Sbjct: 158 -FLWAGRQIGYDHTPAVYIALLDVFERGSYDRVPEEFLREIRGDDKEVLGKLLNVLIRKC 216

Query: 324 SEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
              GL   AL     +   G  PT  TYN L+    +  ++  A+    EM    +  D 
Sbjct: 217 CRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDE 276

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
            +        C+ G   EA  L ++    + VP  + YN +I GLC     E A      
Sbjct: 277 FTLGFFAQALCKVGKWREALSLIEK---EDFVPNTILYNKMISGLCEASFFEEAMDFLNR 333

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           M +   +P+V TY I++ G      L   +   + M+ +G  P    + + +    K  D
Sbjct: 334 MRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDD 393

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHG------------------------------- 532
            S AY+L ++M      P  + YN+L+                                 
Sbjct: 394 FSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLN 453

Query: 533 ----------LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
                     LC  G  E+A +++ +M+G+GF+PD  TY+ +I        +     LF 
Sbjct: 454 KVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFK 513

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
            M   G+ P + TYT+LI   +  G ++ A  +  EM   G  P V+TY  LI+   + +
Sbjct: 514 EMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAK 573

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           ++  A  LF  M  +G  PN  TYT LI+  C +GN ++A ++Y  M      PD
Sbjct: 574 KVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPD 628



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 141/284 (49%), Gaps = 23/284 (8%)

Query: 182 IYTKKSMVEQ---------CLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR 232
           +YT  S++++          L V +KML N   P++     +I  L     + +A ++  
Sbjct: 715 VYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLML 774

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
           MM E G KP++VTY  M+D F K G++ + LEL  EM  +GC+PN VTY VLI      G
Sbjct: 775 MMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATG 834

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
            L++A  L+ +M +        SY  +I GY  + +L  +L L EE+   G APT+  Y 
Sbjct: 835 HLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFIL--SLGLLEEVEKNGSAPTILLYK 892

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS-------YNTLLYGYCRSGNIGEAFLL 405
           +LI    K GR+  A       L K VI   +S       Y +L+Y +  +  I  AF L
Sbjct: 893 VLIDNFVKAGRLEVALE-----LHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFEL 947

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
           F ++    ++P + T+  L+ GL R    E A QL +++    I
Sbjct: 948 FYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSLCQMDI 991



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 79/198 (39%), Gaps = 3/198 (1%)

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           NVL+   C+ G    A E L ++   G+ P  +TY +++   L    L   + +   M  
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSE 269

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
            GLS    T      A    G+   A    S ++ +   PN I YN +I+GLC     ++
Sbjct: 270 LGLSMDEFTLGFFAQALCKVGKWREAL---SLIEKEDFVPNTILYNKMISGLCEASFFEE 326

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
           A      M     +PN  TY IL+    N        R+   M+     P Y   ++L+ 
Sbjct: 327 AMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVH 386

Query: 707 KQLDKDYKVHAVEYLESL 724
                D   +A + L+ +
Sbjct: 387 AYCKSDDFSYAYKLLKKM 404


>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g54980, mitochondrial; Flags: Precursor
 gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
 gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
 gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 851

 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 193/736 (26%), Positives = 345/736 (46%), Gaps = 71/736 (9%)

Query: 21  LKKVRFFFPFCFSVHTYPSISESNNKDSVLNPESESYYKELII--STVEEKPWAFCNNRW 78
           L+ +R   PFC S   +P  SE        NP  E   + L++  ST EE P        
Sbjct: 16  LRNLRNNKPFC-SQSQFPKESE--------NPSQE---QRLLVYGSTSEENP-------- 55

Query: 79  VSDHFQAVVSDPEL-----LVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEI 133
           V+     + + PE      ++ VL   R  P  ALRF+ W     G   D  VF  ++ I
Sbjct: 56  VTSKVSLLSAKPEQKDDASVIDVLLNRRNNPEAALRFYNWARPWRGSFEDGDVFWVLIHI 115

Query: 134 LIESGLL--RSAYWVVETVVCVNMHGILDVLIGGGLSSC------VSIKILDLLLLIYTK 185
           L+ S     R++  ++  V   N   +  VL+   + S       V+ +  + LL  Y+K
Sbjct: 116 LVSSPETYGRASDLLIRYVSTSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSK 175

Query: 186 KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVT 245
               +  + + N+ML   ++P     NR +  L       +A+E+Y  M   G+    VT
Sbjct: 176 DRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVT 235

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
              ++ +  +E +  EALE+L     RG  P+ + Y++ +    +  +L  A  L+R+M 
Sbjct: 236 TQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMK 295

Query: 306 KLGLKV-SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           +  L V S  +Y  +I    ++G + +A+ L++EM++ G++  +     LI G CK   +
Sbjct: 296 EKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDL 355

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
             A   F +M ++   P+ ++++ L+  + ++G + +A   + ++    L P+V   +T+
Sbjct: 356 VSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTI 415

Query: 425 IDG----------------------------------LCRYGDLEVAQQLKENMINQGIL 450
           I G                                  LC+ G  + A +L   M ++GI 
Sbjct: 416 IQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIG 475

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
           P+V++Y  ++ G C+  N+ +AR  F+ +L KGL+P+ + Y+  I G  +  D   A  +
Sbjct: 476 PNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEV 535

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG-FIPDHITYTSIIHASL 569
              M +     + + Y  +++GLCK+G   +A ELL  M+ +       ++Y SII    
Sbjct: 536 VNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFF 595

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
           + G++      +  M   G+SP ++TYT L++      R++ A     EM+ KG++ ++ 
Sbjct: 596 KEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIP 655

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
            Y ALI+G C+   ++ A  LF ++ EEG+ P++  Y  LI+   N GN   AL LYK+M
Sbjct: 656 AYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKM 715

Query: 690 LDREIEPDYCTHSALL 705
           L   +  D  T++ L+
Sbjct: 716 LKDGLRCDLGTYTTLI 731



 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 165/568 (29%), Positives = 267/568 (47%), Gaps = 57/568 (10%)

Query: 207 DVKNCNRIIKVLRDNGFSVKAREVY-----------------RMMGEF---GIKPSIVTY 246
           D+   N +++ +++    V ++E Y                 R+  E    GI  ++V  
Sbjct: 283 DLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAA 342

Query: 247 NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
            +++   CK  ++  AL L  +M+  G SPN VT++VLI  F +NGE+E+A    + M  
Sbjct: 343 TSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEV 402

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
           LGL  S    + II G+ +     EAL L +E    G+A       IL + LCK G+  +
Sbjct: 403 LGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSW-LCKQGKTDE 461

Query: 367 ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
           A     +M  + + P+++SYN ++ G+CR  N+  A ++F  +  + L P   TY+ LID
Sbjct: 462 ATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILID 521

Query: 427 GLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF----------- 475
           G  R  D + A ++  +M +  I  + + Y  ++NG CK+G  S ARE            
Sbjct: 522 GCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLC 581

Query: 476 -------------------------FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
                                    + EM   G+ P+   YT+ + G  K     +A  +
Sbjct: 582 VSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEM 641

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
           ++EM  KG   D+  Y  L+ G CK  ++E A+ L  +++ +G  P    Y S+I     
Sbjct: 642 RDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRN 701

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
           +G++    DL+  ML+ GL   L TYT LI      G L LA   ++EMQ  G+ P+ I 
Sbjct: 702 LGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEII 761

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           Y  ++NGL +  +  +   +F +M++  + PN   Y  +I  +   GN  EA RL+ EML
Sbjct: 762 YTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEML 821

Query: 691 DREIEPDYCTHSALLLKQLDKDYKVHAV 718
           D+ I PD  T   L+  Q+     V A 
Sbjct: 822 DKGILPDGATFDILVSGQVGNLQPVRAA 849



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 174/605 (28%), Positives = 291/605 (48%), Gaps = 61/605 (10%)

Query: 91  ELLVRVLNRIREKPRIALRFF-RWVETQPGVKRDEFVF-------CTILEILIESGLLR- 141
           +LL+R   R  EKP  AL    R +E   G + D  ++       C  L++ + + LLR 
Sbjct: 237 QLLMRASLR-EEKPAEALEVLSRAIER--GAEPDSLLYSLAVQACCKTLDLAMANSLLRE 293

Query: 142 ---------SAYWVVETVVCVNMHGILDVLI---GGGLSSCVSIKILDLLLLI--YTKKS 187
                    S       ++     G +D  I      LS  +S+ ++    LI  + K +
Sbjct: 294 MKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNN 353

Query: 188 MVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV--- 244
            +   L++F+KM + G  P+    + +I+  R NG   KA E Y+ M   G+ PS+    
Sbjct: 354 DLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVH 413

Query: 245 -------------------------------TYNTMLDSFCKEGEMQEALELLWEMQGRG 273
                                            NT+L   CK+G+  EA ELL +M+ RG
Sbjct: 414 TIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRG 473

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
             PN V+YN ++ G  R   ++ AR +  ++L+ GLK + ++Y+ +I G         AL
Sbjct: 474 IGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNAL 533

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR-KNVIPDIISYNTLLYG 392
            +   M +  +      Y  +I GLCK G+ S AR     M+  K +    +SYN+++ G
Sbjct: 534 EVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDG 593

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
           + + G +  A   ++E+    + P V+TY +L++GLC+   ++ A ++++ M N+G+  D
Sbjct: 594 FFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLD 653

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
           +  Y  +++G CK  N+  A   F+E+L +GL P +  Y + I+G   LG+   A  L +
Sbjct: 654 IPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYK 713

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           +ML  G   DL TY  L+ GL K G+L  A+EL  +M   G +PD I YT I++   + G
Sbjct: 714 KMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKG 773

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
              +   +F  M +  ++P ++ Y  +I  H   G L+ AF    EM  KGI P+  T++
Sbjct: 774 QFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFD 833

Query: 633 ALING 637
            L++G
Sbjct: 834 ILVSG 838


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 168/595 (28%), Positives = 289/595 (48%), Gaps = 46/595 (7%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G + DEF        L +SG  R A  ++E    V    +   +I G             
Sbjct: 5   GYRMDEFTLGCFAHSLCKSGKWREALSLLEKEEFVPDTVLYTKMISG------------- 51

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
                 + S+ E+ +    +M  +  LP+V     ++    +     + + +  MM   G
Sbjct: 52  ----LCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEG 107

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE----- 293
             PS   +N+++ ++C+ G+   A +LL +M   GC P  V YN+LI G   + E     
Sbjct: 108 CYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDV 167

Query: 294 LEQARGLIRDMLKLGL---KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
           L+ A     +ML+ G+   KV+  +++  +CG    G   +A N+  EM+++G  P  +T
Sbjct: 168 LDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGI---GKFEKAYNVIREMMSKGFIPDTST 224

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           Y+ +I  LC   +V  A   F EM R  + PD+  Y TL+  +C++G I +A   FDE+ 
Sbjct: 225 YSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEME 284

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
                P VVTY  LI    +   +  A ++ E M+++G  P+++TYT +++G CK G + 
Sbjct: 285 RDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIE 344

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            A + +  M ++ ++               + D    +R+ +        P++ TY  LV
Sbjct: 345 KASQIYKIMKKENVE---------------IPDVDMHFRVVD---GASNEPNVFTYGALV 386

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
            GLCK   ++EA +LL+ M  +G  P+H+ Y ++I    + G L   +++F  ML  G  
Sbjct: 387 DGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYD 446

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           P + TY+ LI       RL+LA    S+M      PNV+ Y  +I+GLC++ + D+AY L
Sbjct: 447 PNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 506

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            + MEE+G  PN  TYT +I+    +G  ++ L L ++M  +   P++ T+  L+
Sbjct: 507 MVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLI 561



 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 168/586 (28%), Positives = 281/586 (47%), Gaps = 38/586 (6%)

Query: 112 RWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCV 171
           +W E    ++++EFV  T+L   + SGL  ++ +             +D L     SSC+
Sbjct: 25  KWREALSLLEKEEFVPDTVLYTKMISGLCEASLF----------EEAMDFLTRMRASSCL 74

Query: 172 -SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV 230
            ++    +LL     K  + +C  + + M+  G  P  +  N ++     +G    A ++
Sbjct: 75  PNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKL 134

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEM-QEALELLWEMQGRGCSPNGVTYNVLITGFS 289
            + M + G +P  V YN ++   C   E  ++ L+L  +  G       V   V I+ FS
Sbjct: 135 LKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFS 194

Query: 290 RN----GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE-ALNLEEEMVTRGV 344
           R     G+ E+A  +IR+M+  G      +Y+ +I GY      VE A  L +EM   G+
Sbjct: 195 RCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVI-GYLCNASKVEKAFQLFQEMKRNGI 253

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
           AP +  Y  LI   CK G +  AR+ F EM R    P++++Y  L++ Y +S  + +A  
Sbjct: 254 APDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANE 313

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI-LPDVITYTIMVNGS 463
           +++ + S+   P +VTY  LIDGLC+ G +E A Q+ + M  + + +PDV  +  +V+G+
Sbjct: 314 VYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGA 373

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
                                +P+ F Y   + G  K     EA  L + M  +G  P+ 
Sbjct: 374 SN-------------------EPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNH 414

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
           + Y+ L+ G CK G L+EA E+   M+  G+ P+  TY+S+I    +   L     + + 
Sbjct: 415 VVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSK 474

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           ML    +P +V YT +I      G+ + A+     M+ KG  PNV+TY A+I+G  +  R
Sbjct: 475 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGR 534

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           +++   L   M  +G  PN  TY +LIN  C+ G   EA +L +EM
Sbjct: 535 VEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEM 580



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 170/610 (27%), Positives = 277/610 (45%), Gaps = 57/610 (9%)

Query: 126 VFCTILEILIESGLLRSAYWVVETVV---CVNMHGILDVLIGGGLSSCVSIK-ILDL--- 178
           +F +++     SG    AY +++ +V   C   + + ++LIGG  SS    K +LDL   
Sbjct: 114 IFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEK 173

Query: 179 ---------LLLIYTKKSMVEQCLL----------VFNKMLRNGLLPDVKNCNRIIKVLR 219
                    ++L     S   +CL           V  +M+  G +PD    +++I  L 
Sbjct: 174 AYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLC 233

Query: 220 DNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGV 279
           +     KA ++++ M   GI P +  Y T++DSFCK G +++A     EM+  GC+PN V
Sbjct: 234 NASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVV 293

Query: 280 TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
           TY  LI  + ++ ++ +A  +   ML  G   +  +Y  +I G  + G + +A  + + M
Sbjct: 294 TYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIM 353

Query: 340 VTRGVA-----------------PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
               V                  P + TY  L+ GLCK  +V +AR     M  +   P+
Sbjct: 354 KKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPN 413

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
            + Y+ L+ G C++G + EA  +F  +      P V TY++LID L +   L++A ++  
Sbjct: 414 HVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLS 473

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            M+     P+V+ YT M++G CK+G    A +    M  KG  P+   YT  I G  K G
Sbjct: 474 KMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSG 533

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT-Y 561
              +   L ++M +KG  P+ +TY VL++  C  G L+EA++LL +M    + P H+  Y
Sbjct: 534 RVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEM-KQTYWPRHVAGY 592

Query: 562 TSIIHASLE--MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
             +I       +  L    ++  N       P    Y VLI      GRLE+A     E+
Sbjct: 593 RKVIEGFNREFIASLYLSFEISEN----DSVPVAPVYRVLIDNFIKAGRLEIALELNEEL 648

Query: 620 QVKGIRP----NVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
                 P    N   +  LI  L    + D+A+ L+ DM   G +P       LI     
Sbjct: 649 S--SFSPFSAANQNIHITLIENLSLAHKADKAFELYADMISRGSIPELSILVHLIKGLLR 706

Query: 676 AGNWQEALRL 685
              W+EAL+L
Sbjct: 707 VNRWEEALQL 716



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 118/495 (23%), Positives = 215/495 (43%), Gaps = 73/495 (14%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAY-WVVETVVCVNMHGILDVLIGG 165
           A + F+ ++ + G+  D +V+ T+++   ++G +  A  W              D +   
Sbjct: 241 AFQLFQEMK-RNGIAPDVYVYTTLIDSFCKAGFIEQARNW-------------FDEMERD 286

Query: 166 GLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSV 225
           G +   ++     L+  Y K   V +   V+  ML  G  P++     +I  L   G   
Sbjct: 287 GCAP--NVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIE 344

Query: 226 KAREVYRMMGEFGIK-----------------PSIVTYNTMLDSFCKEGEMQEALELLWE 268
           KA ++Y++M +  ++                 P++ TY  ++D  CK  +++EA +LL  
Sbjct: 345 KASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKS 404

Query: 269 MQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
           M   GC PN V Y+ LI G  + G+L++A+ +   ML+ G   + ++Y+ +I    +   
Sbjct: 405 MSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKR 464

Query: 329 LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNT 388
           L  AL +  +M+    AP +  Y  +I GLCK G+  +A      M  K   P++++Y  
Sbjct: 465 LDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTA 524

Query: 389 LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM---- 444
           ++ G+ +SG + +   L  ++ S+   P  VTY  LI+  C  G L+ A +L E M    
Sbjct: 525 MIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTY 584

Query: 445 ----------INQGI-------------------LPDVITYTIMVNGSCKMGNLSMAREF 475
                     + +G                    +P    Y ++++   K G L +A E 
Sbjct: 585 WPRHVAGYRKVIEGFNREFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIALEL 644

Query: 476 FNEMLRKGLQPDRFA----YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
             E+      P   A    + T I          +A+ L  +M+++G  P+L     L+ 
Sbjct: 645 NEEL--SSFSPFSAANQNIHITLIENLSLAHKADKAFELYADMISRGSIPELSILVHLIK 702

Query: 532 GLCKLGSLEEANELL 546
           GL ++   EEA +LL
Sbjct: 703 GLLRVNRWEEALQLL 717



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 130/280 (46%), Gaps = 25/280 (8%)

Query: 182 IYTKKSMVEQ---------CLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR 232
           +YT  S++++          L V +KML N   P+V     +I  L   G + +A ++  
Sbjct: 449 VYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMV 508

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
           MM E G  P++VTY  M+D F K G +++ LELL +M  +GC+PN VTY VLI      G
Sbjct: 509 MMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTG 568

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
            L++A  L+ +M +         Y  +I G++ +   + +L L  E+      P    Y 
Sbjct: 569 LLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNRE--FIASLYLSFEISENDSVPVAPVYR 626

Query: 353 ILIYGLCKWGRVSDA--------RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
           +LI    K GR+  A            F    +N+      + TL+     +    +AF 
Sbjct: 627 VLIDNFIKAGRLEIALELNEELSSFSPFSAANQNI------HITLIENLSLAHKADKAFE 680

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
           L+ ++ SR  +P +     LI GL R    E A QL +++
Sbjct: 681 LYADMISRGSIPELSILVHLIKGLLRVNRWEEALQLLDSI 720



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 89/235 (37%), Gaps = 49/235 (20%)

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           M   G+  D  T     H LCK G   EA  LL K   + F+PD + YT +I    E   
Sbjct: 1   MSTMGYRMDEFTLGCFAHSLCKSGKWREALSLLEK---EEFVPDTVLYTKMISGLCEASL 57

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTV----------------------------------- 598
                D    M      P ++TY +                                   
Sbjct: 58  FEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNS 117

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR--------LRRIDQAYGL 650
           L+HA+   G    A+    +M   G +P  + YN LI G+C         L   ++AYG 
Sbjct: 118 LVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYG- 176

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             +M E G++ NK   +      C  G +++A  + +EM+ +   PD  T+S ++
Sbjct: 177 --EMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVI 229


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 149/489 (30%), Positives = 258/489 (52%), Gaps = 21/489 (4%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G + S+ TYN  LD+  K    Q A E   +MQ RG  P+  TY++++ G  + GEL++A
Sbjct: 33  GYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKA 92

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG-VAPTLATYNILIY 356
           + L+  + + G+K++  +Y+ +I G  +   + +AL + + M + G   P + T+N L+ 
Sbjct: 93  KELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLK 152

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           GLC   R+S+A   F  M +    P++ISY+TLL G C++G + EA  L++E+  ++ VP
Sbjct: 153 GLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVP 212

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI-----------------M 459
            +V Y + + GLC+   +  A      M+ +G   D + ++                  M
Sbjct: 213 DLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQM 272

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA-KG 518
           +   C+ G L  A + F EM+ +   P    + T I    K     +   L + M + K 
Sbjct: 273 IEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKE 332

Query: 519 F--PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
           F  PP+L TYN++V  LCK   L+EA EL+ +M   G  PD +TY++++    ++G L R
Sbjct: 333 FYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDR 392

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
             DL   M ++G+ P   T   +++A +  G+++ A  +   M+ +G  P+++TYN L++
Sbjct: 393 ACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLD 452

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
           GLC+  RID+A      M      P+ ++YTI+I   C +G    A  +++EM+ R + P
Sbjct: 453 GLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLP 512

Query: 697 DYCTHSALL 705
           D   + +LL
Sbjct: 513 DTVLYHSLL 521



 Score =  258 bits (658), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 167/589 (28%), Positives = 280/589 (47%), Gaps = 46/589 (7%)

Query: 108 LRFFRWVETQPGVKRDEFVFCTILEILIESG-----------LLRSAYWVVETVVCVNMH 156
           +R F W+  Q G +   F +   L+ L ++            + R  Y   +    + + 
Sbjct: 22  VRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLR 81

Query: 157 GILDV--------LIGGGLSSCVSIKILDLLLLI--YTKKSMVEQCLLVFNKMLRNG-LL 205
           G+           L+G    S V + ++   ++I    K S V+  L +F  M   G  +
Sbjct: 82  GLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCV 141

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           PDV   N ++K L       +A  ++  M + G +P++++Y+T+LD  CK G + EA  L
Sbjct: 142 PDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRL 201

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
             EM  + C P+ V Y   +TG  +   + +A    R M+  G K  A +++ +I     
Sbjct: 202 WEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVI----- 256

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
            G+L +  + EE              N +I  LC+ G + +A   F EM+ +N  P    
Sbjct: 257 -GILCKKGHAEE------------AQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAEL 303

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRN---LVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
           +NTL++  C+S  + +  LLF  ++S       P + TYN ++D LC+   L+ AQ+L  
Sbjct: 304 FNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVN 363

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            M N G+ PDV+TY+ +V+G CK+G L  A +   EM ++G+ PD F   + +    K G
Sbjct: 364 EMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAG 423

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
               A    E M A+G  PDL+TYN L+ GLCK G ++EA   L KMV     PD  +YT
Sbjct: 424 KVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYT 483

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
            II A    G       +F  M+++G+ P  V Y  L+   A  G  +LA      ++  
Sbjct: 484 IIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALEL---LKTS 540

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
             +P+ + +  +++GLC+  + + A  +   M + G   + +TY  +++
Sbjct: 541 LCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVS 589



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 161/531 (30%), Positives = 250/531 (47%), Gaps = 59/531 (11%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
           F +M R G  PD    + +++ L   G   KA+E+   + E G+K +++TY+ ++D  CK
Sbjct: 61  FQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCK 120

Query: 256 EGEMQEALELLWEMQ-GRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
              + +ALE+   M  G GC P+ VT+N L+ G      + +A  L   M K G + +  
Sbjct: 121 ASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVI 180

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           SY+ ++ G  + G L EA  L EEMV +   P L  Y   + GLCK  RV++A     +M
Sbjct: 181 SYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKM 240

Query: 375 LRKNVIPDIISYNTLL-----YGY------------CRSGNIGEAFLLFDELRSRNLVPT 417
           + K    D ++++T++      G+            CRSG + EA   F+E+ SRN  P+
Sbjct: 241 VTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPS 300

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL---PDVITYTIMVNGSCKMGNLSMARE 474
              +NTLI  +C+   L     L + M +       P++ TY IMV+  CK   L  A+E
Sbjct: 301 AELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQE 360

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
             NE                                   M   G  PD++TY+ LV GLC
Sbjct: 361 LVNE-----------------------------------MANYGLSPDVVTYSALVDGLC 385

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           KLG L+ A +LL +M  +G  PD  T  SI++A  + G +         M  +G +P LV
Sbjct: 386 KLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLV 445

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           TY  L+      GR++ A  + ++M      P+V +Y  +I  LCR  +   A+ +F +M
Sbjct: 446 TYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEM 505

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            + G+LP+   Y  L++     G    AL L K  L    +PD+  H  +L
Sbjct: 506 VKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSL---CKPDFVMHKMVL 553



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 197/419 (47%), Gaps = 23/419 (5%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   +++   ++ +M+    +PD+      +  L       +A +  R M   G K   V
Sbjct: 191 KAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAV 250

Query: 245 TYNT-----------------MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITG 287
            ++T                 M++  C+ G + EA +   EM  R   P+   +N LI  
Sbjct: 251 AFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHA 310

Query: 288 FSRNGELEQARGL---IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
             ++  L     L   ++ M +     +  +YN ++    +   L EA  L  EM   G+
Sbjct: 311 VCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGL 370

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
           +P + TY+ L+ GLCK G++  A     EM ++ V PD  +  ++L    ++G +  A  
Sbjct: 371 SPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALS 430

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
             + +++R   P +VTYNTL+DGLC+ G ++ A      M+     PDV +YTI++   C
Sbjct: 431 HLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALC 490

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
           + G  + A   F EM+++G+ PD   Y + + G  + G    A  L +  L K   PD +
Sbjct: 491 RSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCK---PDFV 547

Query: 525 TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
            + +++ GLCK G  E+A E++ +M   GF  D  TY S++    ++G + + R L ++
Sbjct: 548 MHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQLVDD 606



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 146/300 (48%), Gaps = 32/300 (10%)

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
           + M EF   P++ TYN M+D+ CK  ++ EA EL+ EM   G SP+ VTY+ L+ G  + 
Sbjct: 328 KSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKL 387

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G+L++A  L+ +M K G+   + +   I+   S+ G +  AL+  E M  RG  P L TY
Sbjct: 388 GKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTY 447

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           N L+ GLCK GR+ +A     +M+     PD+ SY  ++   CRSG    A  +F E+  
Sbjct: 448 NTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVK 507

Query: 412 RNLVPTVVTYNTLIDGL--------------------------------CRYGDLEVAQQ 439
           R ++P  V Y++L+DGL                                C+ G  E A +
Sbjct: 508 RGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCKPDFVMHKMVLDGLCKAGKAEDACE 567

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           + E M + G   D  TY  +V+G  K+G +  AR+  ++        +R +     AG L
Sbjct: 568 VVERMADAGFPADAFTYISVVSGLRKLGKVDKARQLVDDASETHTSVERLSMEKAEAGAL 627



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 64/121 (52%), Gaps = 1/121 (0%)

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
           +KG   ++ TY   + A A     +LA+  F +MQ +G  P+  TY+ ++ GLC+   +D
Sbjct: 31  QKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELD 90

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD-REIEPDYCTHSAL 704
           +A  L   + E G+  N  TY+++I+  C A    +AL ++K M       PD  T ++L
Sbjct: 91  KAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSL 150

Query: 705 L 705
           L
Sbjct: 151 L 151


>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
          Length = 1595

 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 160/504 (31%), Positives = 248/504 (49%), Gaps = 35/504 (6%)

Query: 203  GLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMG-----------------------EFG 238
            G LP+V +CNR++K+L +      AR++Y  M+G                       E G
Sbjct: 938  GSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEG 997

Query: 239  IK-----------PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITG 287
            +K           P +V YN ++D +C+ G+M   L LL EM+  G  P  VTY  LI  
Sbjct: 998  LKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINW 1057

Query: 288  FSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPT 347
              + G+LE+   L  +M K G   +   YN +I          +A+ + ++M   G  P 
Sbjct: 1058 LGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPD 1117

Query: 348  LATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFD 407
            + T+N LI GLC  G V  A H   E +R+ + P+ +SY  L++G+C  G +  A  L  
Sbjct: 1118 IITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLV 1177

Query: 408  ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG 467
            E+  R   P VVT+  LI GL   G +  A  ++E M  + + PDV  Y ++++G CK  
Sbjct: 1178 EMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKR 1237

Query: 468  NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
             L  A+    EML K +QPD F Y T I G ++  +  +A ++ E M  KG  PD+++ N
Sbjct: 1238 MLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCN 1297

Query: 528  VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
             ++ G C+ G + EA   +  M   G IPD  TYT++I    + G+L        +M+++
Sbjct: 1298 AMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKR 1357

Query: 588  GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
               P +VTY+ LI+ +   G  + A   F+ MQ + + PNV+TY  LI  L +  ++ +A
Sbjct: 1358 KCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRA 1417

Query: 648  YGLFIDMEEEGILPNKYTYTILIN 671
               F  M      PN  T   L+N
Sbjct: 1418 GLYFETMLLNHCSPNDVTLHYLVN 1441



 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 163/574 (28%), Positives = 278/574 (48%), Gaps = 32/574 (5%)

Query: 177  DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
            ++L+  Y ++  + + LL+  +M  NG LP +     +I  L   G   K   ++  M +
Sbjct: 1017 NVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRK 1076

Query: 237  FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
             G  P++  YN+++D+ C      +A+ +L +M   GC P+ +T+N LITG    G + +
Sbjct: 1077 RGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRK 1136

Query: 297  ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
            A   +R+ ++  L  +  SY P+I G+  +G L+ A +L  EM+ RG  P + T+  LI+
Sbjct: 1137 AEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIH 1196

Query: 357  GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
            GL   G+VS+A     +M  + V PD+  YN L+ G C+   +  A  + +E+  +N+ P
Sbjct: 1197 GLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQP 1256

Query: 417  TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
                Y TLIDG  R  +L  A+++ E M ++G+ PD+++   M+ G C+ G +S A    
Sbjct: 1257 DEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCM 1316

Query: 477  NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
            + M + G  PD F YTT I+G  K G+ + A R   +M+ +   P+++TY+ L++G CK 
Sbjct: 1317 SNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKT 1376

Query: 537  GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
            G  + A  L   M  +   P+ +TYT +I +  +   + R    F  ML    SP  VT 
Sbjct: 1377 GDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTL 1436

Query: 597  TVLIHAHAA----------------RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
              L++   +                 G+  L  + F ++      P    YNA+I  LCR
Sbjct: 1437 HYLVNGLTSCTPCVINSICCNTSEVHGKDAL-LVVFKKLVFDIGDPRNSAYNAIIFSLCR 1495

Query: 641  LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG---NWQ------------EALRL 685
               + +A      M ++G +PN  T+  L+   C+ G   NW+            E +  
Sbjct: 1496 HNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSVNWRTILPNEFQQEEFEIIFR 1555

Query: 686  YKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVE 719
            YK + D+      C   + +L+ L     +  VE
Sbjct: 1556 YKFLFDQYATESVCCEVSRVLQHLAGCKSLQRVE 1589


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 155/497 (31%), Positives = 258/497 (51%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
           FN ML     P +    +I+  L        A  + + M   GI+P +VT + +++ FC 
Sbjct: 120 FNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCH 179

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
            G+M  +  +L ++   G  PN +    L+ G    GE++++      ++  G +++  S
Sbjct: 180 LGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVS 239

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           Y  ++ G  + G    A+ L   +  R   P +  YN +I GLCK   V++A   + EM 
Sbjct: 240 YGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMN 299

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
            + + PD+I+Y+TL+ G+C +G +  AF L +E+  +N+ P V TY  LID LC+ G L+
Sbjct: 300 SRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLK 359

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            A+ L   M  +G+ P+V+TY+ +++G C +G +  A++ F+ M++  + P   +Y   I
Sbjct: 360 EAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMI 419

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
            G  K     EA  L  EML K   P+ +TYN L+ GLCK G +  A +L++++   G  
Sbjct: 420 NGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQP 479

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
            D ITYTS++    +  +L +   LF  M  +G+ P   TYT LI       RL+ A   
Sbjct: 480 ADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKL 539

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
           F  + VKG   +V TYN +I GLC+   +D+A  +   ME+ G +P+  T+ I+I     
Sbjct: 540 FQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFE 599

Query: 676 AGNWQEALRLYKEMLDR 692
                +A +L  EM+ +
Sbjct: 600 KDENDKAEKLLHEMIAK 616



 Score =  261 bits (667), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 149/484 (30%), Positives = 252/484 (52%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PSI+ +  +L S  K      A+ L  +M+ +G  P+ VT ++LI  F   G++  +  +
Sbjct: 130 PSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSV 189

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  +LKLG + +      ++ G   KG + ++L+  +++V +G      +Y  L+ GLCK
Sbjct: 190 LGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 249

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G    A      +  ++  PD++ YNT++ G C+   + EA+  + E+ SR + P V+T
Sbjct: 250 IGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVIT 309

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y+TLI G C  G L  A  L   M  + I PDV TYTI+++  CK G L  A+     M 
Sbjct: 310 YSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMT 369

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           ++G++P+   Y+T + G   +G+   A ++   M+     P + +YN++++GLCK  S++
Sbjct: 370 KEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVD 429

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA  LLR+M+    +P+ +TY S+I    + G +    DL   +  +G    ++TYT L+
Sbjct: 430 EAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLL 489

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                   L+ A   F +M+ +GI+PN  TY ALI+GLC+  R+  A  LF  +  +G  
Sbjct: 490 DGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCC 549

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
            + YTY ++I   C  G   EAL +  +M D    PD  T   ++    +KD    A + 
Sbjct: 550 IDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKL 609

Query: 721 LESL 724
           L  +
Sbjct: 610 LHEM 613



 Score =  248 bits (634), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 142/402 (35%), Positives = 219/402 (54%), Gaps = 12/402 (2%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A ++ RM+ +   +P +V YNT++D  CK+  + EA +   EM  RG  P+ +TY+ LI 
Sbjct: 256 AIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLIC 315

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           GF   G+L  A  L+ +M    +    ++Y  +I    ++G L EA NL   M   GV P
Sbjct: 316 GFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKP 375

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
            + TY+ L+ G C  G V +A+  F  M++  V P + SYN ++ G C+  ++ EA  L 
Sbjct: 376 NVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLL 435

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
            E+  +N+VP  VTYN+LIDGLC+ G +  A  L + + ++G   DVITYT +++G CK 
Sbjct: 436 REMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKN 495

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
            NL  A   F +M  +G+QP+++ YT  I G  K      A +L + +L KG   D+ TY
Sbjct: 496 QNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTY 555

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           NV++ GLCK G L+EA  +  KM  +G IPD +T+  II +  E  +  +   L + M+ 
Sbjct: 556 NVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIA 615

Query: 587 KGL----------SPTLVTYTVLIHAHAARGRLELAFMYFSE 618
           KGL          SP  VT  V+++ H        A+++ S 
Sbjct: 616 KGLLHFRNFHGERSP--VTNKVIVNFHEKETLKPTAYLFASS 655



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 144/463 (31%), Positives = 233/463 (50%)

Query: 198 KMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG 257
           +M   G+ PD+   + +I      G    +  V   + + G +P+ +   T++   C +G
Sbjct: 157 QMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKG 216

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
           E++++L    ++  +G   N V+Y  L+ G  + GE   A  L+R +     +     YN
Sbjct: 217 EVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYN 276

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            II G  +  L+ EA +   EM +RG+ P + TY+ LI G C  G++  A     EM  K
Sbjct: 277 TIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLK 336

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
           N+ PD+ +Y  L+   C+ G + EA  L   +    + P VVTY+TL+DG C  G++  A
Sbjct: 337 NINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNA 396

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
           +Q+   M+   + P V +Y IM+NG CK  ++  A     EML K + P+   Y + I G
Sbjct: 397 KQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDG 456

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
             K G  + A  L +E+  +G P D+ITY  L+ GLCK  +L++A  L  KM   G  P+
Sbjct: 457 LCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPN 516

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
             TYT++I    +   L+  + LF ++L KG    + TY V+I      G L+ A    S
Sbjct: 517 KYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKS 576

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
           +M+  G  P+ +T+  +I  L      D+A  L  +M  +G+L
Sbjct: 577 KMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 619



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/456 (25%), Positives = 217/456 (47%), Gaps = 26/456 (5%)

Query: 271 GRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLV 330
            +G  PN VT ++LI      G++  +  ++  +LKLG + ++ +   ++     KG   
Sbjct: 4   AKGIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLM-----KGETR 58

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGR---------------------VSDARH 369
            A+ L   +  R   P +   + L + +  +                       V DA  
Sbjct: 59  CAIKLPRMIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVS 118

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
           +F  ML     P II +  +L    +  +   A  L  ++  + + P +VT + LI+  C
Sbjct: 119 QFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFC 178

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
             G +  +  +   ++  G  P+ I  T ++ G C  G +  +  F ++++ +G Q ++ 
Sbjct: 179 HLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQV 238

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
           +Y T + G  K+G+T  A +L   +  +   PD++ YN ++ GLCK   + EA +   +M
Sbjct: 239 SYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEM 298

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRL 609
              G  PD ITY+++I      G L     L N M  K ++P + TYT+LI A    G+L
Sbjct: 299 NSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKL 358

Query: 610 ELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL 669
           + A      M  +G++PNV+TY+ L++G C +  +  A  +F  M +  + P+  +Y I+
Sbjct: 359 KEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIM 418

Query: 670 INENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           IN  C   +  EA+ L +EML + + P+  T+++L+
Sbjct: 419 INGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLI 454


>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 167/605 (27%), Positives = 308/605 (50%), Gaps = 6/605 (0%)

Query: 106 IALRFFRWVETQPGVKRDEF--VFCTILEILIESGLLRSAYWVVETVVCVNMHG--ILDV 161
           +AL+F +WV  QPG++ +    +      +L+ + L   A  +++ +   N     +  V
Sbjct: 34  LALKFLKWVIKQPGLEPNHLTHILGITTHVLVRARLYGYAKSILKHLAQKNSGSNFLFGV 93

Query: 162 LIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDN 221
           L+        +  + DLL+ +Y ++ MV   +  F+ ML  G  P V  CN I+  +  N
Sbjct: 94  LMDTYPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKN 153

Query: 222 GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY 281
             +      ++ M    + P++ ++N ++   C +G++++A+ +L  M+  G  P  V+Y
Sbjct: 154 CRAHLVWXFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSY 213

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
           N L++   + G  + A  LI  M   G++    +YN  I          +   + ++M  
Sbjct: 214 NTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRN 273

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
           + + P   +YN LI G  K G++  A   F EM+  N+ P++I+YN L+ GYC +GN  E
Sbjct: 274 KMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEE 333

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM-INQGILPDVITYTIMV 460
           A  L D + + ++ P  VT  TL++GL +    +VA+ + E   IN+  L + I++T+M+
Sbjct: 334 ALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSL-NCISHTVMI 392

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
           +G C+ G L  A +   EM + G+ PD   ++  I G  K+G+ ++A  +  ++  +GF 
Sbjct: 393 DGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFV 452

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           P+ + ++ L++  CK+G++ E  +    M  +G   D+ T  S++ +  E G L    + 
Sbjct: 453 PNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEF 512

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
            +++ R GL P  VT+  +I+ +A  G    AF  F +M   G  P+  TY +L+  LC+
Sbjct: 513 LHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCK 572

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
            +   +A  L   +    +  +  +Y  LI E   +GN  EA+RL++EM+   I PD  T
Sbjct: 573 GQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYT 632

Query: 701 HSALL 705
           ++ +L
Sbjct: 633 YTCIL 637



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 149/559 (26%), Positives = 257/559 (45%), Gaps = 36/559 (6%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           + S   Q  LV  KM    + P+  + N +I      G    A  V+  M E  + P+++
Sbjct: 257 RNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLI 316

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TYN +++ +C  G  +EAL LL  M+     PN VT   L+ G  ++ + + AR ++   
Sbjct: 317 TYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERY 376

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
                 ++  S+  +I G    GLL EA  L  EM   GV P + T+++LI G CK G +
Sbjct: 377 SINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNL 436

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
           + A+    ++ R+  +P+ + ++TL+Y  C+ GN+ E    +  +          T N+L
Sbjct: 437 NKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSL 496

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           +  LC  G L  A++   ++   G++P+ +T+  ++NG   +G+ S A   F++M+  G 
Sbjct: 497 VASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGH 556

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            P  F Y + +    K  +  EA +L +++       D I+YN L+  + K G+L EA  
Sbjct: 557 HPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVR 616

Query: 545 LLRKMVGDGFIPDHITYT-------------------------------SIIHASLEMGD 573
           L  +M+ +  +PD  TYT                               SI++     G 
Sbjct: 617 LFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGL 676

Query: 574 LRRGRD-----LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
            + G+      LF  M  KGLS  L+    +   ++  G++  A    S+ + K + PN+
Sbjct: 677 FKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNL 736

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
            T+N L++G  R + I   + L+  M   G  PN+ TY  LI   CN G  +  +++ K 
Sbjct: 737 TTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKM 796

Query: 689 MLDREIEPDYCTHSALLLK 707
            +      D  T + L+ K
Sbjct: 797 FIAESSTIDDLTFNMLIRK 815



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 154/558 (27%), Positives = 260/558 (46%), Gaps = 36/558 (6%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           KK   +  L++ + M   G+  DV   N  I  L  N  S +   V + M    I P+ V
Sbjct: 222 KKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEV 281

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           +YNT+++ F KEG++  A  +  EM     SPN +TYN+LI G+  NG  E+A  L+  M
Sbjct: 282 SYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVM 341

Query: 305 --------------LKLGLKVSAH---------------------SYNPIICGYSEKGLL 329
                         L  GL  SA                      S+  +I G    GLL
Sbjct: 342 EANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLL 401

Query: 330 VEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTL 389
            EA  L  EM   GV P + T+++LI G CK G ++ A+    ++ R+  +P+ + ++TL
Sbjct: 402 DEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTL 461

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
           +Y  C+ GN+ E    +  +          T N+L+  LC  G L  A++   ++   G+
Sbjct: 462 IYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGL 521

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
           +P+ +T+  ++NG   +G+ S A   F++M+  G  P  F Y + +    K  +  EA +
Sbjct: 522 VPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARK 581

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           L +++       D I+YN L+  + K G+L EA  L  +M+ +  +PD  TYT I+   +
Sbjct: 582 LLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLI 641

Query: 570 EMGDLRRGRDLFNNMLRKG-LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
             G L         +++K  L+   + YT  I      G+ + A   F EM+ KG+  ++
Sbjct: 642 REGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDL 701

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
           I  N++ +G  R+ ++  A  L      + ++PN  T+ IL++      +     +LY  
Sbjct: 702 IALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNL 761

Query: 689 MLDREIEPDYCTHSALLL 706
           M      P+  T+ +L+L
Sbjct: 762 MRRSGFFPNRLTYHSLIL 779



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 133/484 (27%), Positives = 232/484 (47%), Gaps = 21/484 (4%)

Query: 262 ALELL-WEMQGRGCSPN------GVTYNVLIT----GFSRN--GELEQAR-------GLI 301
           AL+ L W ++  G  PN      G+T +VL+     G++++    L Q         G++
Sbjct: 35  ALKFLKWVIKQPGLEPNHLTHILGITTHVLVRARLYGYAKSILKHLAQKNSGSNFLFGVL 94

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
            D   L     A  ++ +I  Y  +G++  A+N    M+ RG  P++ T N+++  + K 
Sbjct: 95  MDTYPLCSSNPA-VFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKN 153

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
            R       F +ML   V P++ S+N L+   C  G + +A  +   +     VPT+V+Y
Sbjct: 154 CRAHLVWXFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSY 213

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           NTL+   C+ G  + A  L  +M  +GI  DV TY + ++  C+    +       +M  
Sbjct: 214 NTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRN 273

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
           K + P+  +Y T I G +K G    A R+  EM+     P+LITYN+L++G C  G+ EE
Sbjct: 274 KMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEE 333

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A  LL  M  +   P+ +T  ++++   +       R++         S   +++TV+I 
Sbjct: 334 ALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMID 393

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
                G L+ AF    EM   G+ P++IT++ LING C++  +++A  +   +  EG +P
Sbjct: 394 GLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVP 453

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYL 721
           N   ++ LI  +C  GN  E ++ Y  M       D  T ++L+    +    V A E+L
Sbjct: 454 NNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFL 513

Query: 722 ESLT 725
             ++
Sbjct: 514 HHIS 517



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 143/527 (27%), Positives = 252/527 (47%), Gaps = 11/527 (2%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           +  ++++   +  +M ++G+ PD+   + +I      G   KA+EV   +   G  P+ V
Sbjct: 397 RNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNV 456

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
            ++T++ + CK G + E ++    M   G + +  T N L+     NG+L +A   +  +
Sbjct: 457 IFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHI 516

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
            ++GL  ++ +++ II GY+  G    A ++ ++M++ G  P+  TY  L+  LCK    
Sbjct: 517 SRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNF 576

Query: 365 SDARHRFFEMLRK-NVIP---DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            +AR    ++L+K + IP   D ISYNTL+    +SGN+ EA  LF+E+   N++P   T
Sbjct: 577 WEAR----KLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYT 632

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILP-DVITYTIMVNGSCKMGNLSMAREFFNEM 479
           Y  ++ GL R G L  A      ++ + IL  + I YT  ++G  K G    A   F EM
Sbjct: 633 YTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEM 692

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
             KGL  D  A  +   G  ++G    A  L  +   K   P+L T+N+L+HG  +   +
Sbjct: 693 EEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDI 752

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
               +L   M   GF P+ +TY S+I      G L  G  +    + +  +   +T+ +L
Sbjct: 753 MSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNML 812

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI-DMEEEG 658
           I        L+        M+V  +  +  T  A+ + L R R + Q Y +F+ +M ++G
Sbjct: 813 IRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVR-RMVSQNYFVFMHEMLKKG 871

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            +P    Y  ++   C  G+ Q A +L  +M+   I  D     A++
Sbjct: 872 FIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMV 918



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 131/548 (23%), Positives = 244/548 (44%), Gaps = 36/548 (6%)

Query: 202  NGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQE 261
            NG   D   CN ++  L +NG  V+A E    +   G+ P+ VT++ +++ +   G+   
Sbjct: 484  NGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSG 543

Query: 262  ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC 321
            A  +  +M   G  P+  TY  L+    +     +AR L++ +  + L V   SYN +I 
Sbjct: 544  AFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIV 603

Query: 322  GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
              S+ G L+EA+ L EEM+   + P   TY  ++ GL + GR+  A      +++K ++ 
Sbjct: 604  EISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILT 663

Query: 382  -DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
             + I Y   + G  ++G    A  LF E+  + L   ++  N++ DG  R G +  A  L
Sbjct: 664  LNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSL 723

Query: 441  KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
                 N+ ++P++ T+ I+++G  +  ++    + +N M R G  P+R  Y + I G   
Sbjct: 724  ISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCN 783

Query: 501  LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE------------------- 541
             G      ++ +  +A+    D +T+N+L+   C++  L++                   
Sbjct: 784  HGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDT 843

Query: 542  ----ANELLRKMVG------------DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
                 + L+R+MV              GFIP    Y +++     +GD++    L + M+
Sbjct: 844  QKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMV 903

Query: 586  RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
              G+S        ++   A  G++E A      M      P   T+  L++  C+     
Sbjct: 904  ALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFK 963

Query: 646  QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            +A+ L I ME   +  +   Y +LI+  C  G+   AL  Y+E+  + + P+  T+  L+
Sbjct: 964  EAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLV 1023

Query: 706  LKQLDKDY 713
                 K Y
Sbjct: 1024 SAISTKHY 1031



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 130/507 (25%), Positives = 237/507 (46%), Gaps = 5/507 (0%)

Query: 195  VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
            VF+KM+  G  P       ++KVL       +AR++ + +    +    ++YNT++    
Sbjct: 547  VFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEIS 606

Query: 255  KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI-RDMLKLGLKVSA 313
            K G + EA+ L  EM      P+  TY  +++G  R G L  A   + R M K  L +++
Sbjct: 607  KSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNS 666

Query: 314  HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
              Y   I G  + G    AL L +EM  +G++  L   N +  G  + G+V  A     +
Sbjct: 667  IVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISK 726

Query: 374  MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
               KNVIP++ ++N LL+GY R  +I   F L++ +R     P  +TY++LI GLC +G 
Sbjct: 727  TRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGM 786

Query: 434  LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN--EMLRKGLQPDRFAY 491
            LE+  ++ +  I +    D +T+ +++   C++ +L    +  +  E+ R  L  D    
Sbjct: 787  LELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKA 846

Query: 492  TTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
             T +   ++   +   +    EML KGF P    Y  ++  +C++G ++ A +L  +MV 
Sbjct: 847  VTDVL--VRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVA 904

Query: 552  DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLEL 611
             G   D     +++      G +     +   MLR    PT  T+T L+H    +   + 
Sbjct: 905  LGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKE 964

Query: 612  AFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
            A      M+   ++ +++ YN LI+  C    +  A   + +++++G+LPN  TY +L++
Sbjct: 965  AHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVS 1024

Query: 672  ENCNAGNWQEALRLYKEMLDREIEPDY 698
                         + K++ DR +   Y
Sbjct: 1025 AISTKHYVSRGEIVLKDLNDRGLVSGY 1051



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 84/373 (22%), Positives = 153/373 (41%), Gaps = 35/373 (9%)

Query: 222  GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY 281
            G S  A  +++ M E G+   ++  N++ D + + G++  A  L+ + + +   PN  T+
Sbjct: 680  GQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTF 739

Query: 282  NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
            N+L+ G+SR  ++     L   M + G   +  +Y+ +I G    G+L   + + +  + 
Sbjct: 740  NILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIA 799

Query: 342  RGVAPTLATYNILIYGLCK---WGRVSDARHRF--------------------------- 371
                    T+N+LI   C+     +V D  H                             
Sbjct: 800  ESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQN 859

Query: 372  -----FEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
                  EML+K  IP    Y T++   CR G+I  AF L D++ +  +         ++ 
Sbjct: 860  YFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVR 919

Query: 427  GLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
            GL   G +E A  + + M+    +P   T+T +++  CK  N   A      M    ++ 
Sbjct: 920  GLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKL 979

Query: 487  DRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
            D  AY   I+     GD   A    EE+  KG  P++ TY VLV  +     +     +L
Sbjct: 980  DIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVL 1039

Query: 547  RKMVGDGFIPDHI 559
            + +   G +  ++
Sbjct: 1040 KDLNDRGLVSGYL 1052



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/292 (19%), Positives = 125/292 (42%), Gaps = 35/292 (11%)

Query: 172  SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
            ++   ++LL  Y++   +  C  ++N M R+G  P+    + +I  L ++G      ++ 
Sbjct: 735  NLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKML 794

Query: 232  RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL-------------------------- 265
            +M          +T+N ++   C+  ++ + ++L                          
Sbjct: 795  KMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRR 854

Query: 266  ---------LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSY 316
                     + EM  +G  P    Y  ++    R G+++ A  L   M+ LG+ +   + 
Sbjct: 855  MVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAE 914

Query: 317  NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
              ++ G +  G + EA+ + + M+     PT +T+  L++  CK     +A +    M  
Sbjct: 915  CAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEH 974

Query: 377  KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
              V  DI++YN L+   C +G++  A   ++E++ + L+P + TY  L+  +
Sbjct: 975  YRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAI 1026



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/183 (21%), Positives = 85/183 (46%), Gaps = 14/183 (7%)

Query: 127  FCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKK 186
            +CT+++ +   G ++ A+ + + +V + +   LD       + C  ++ L L        
Sbjct: 879  YCTMMKRMCRVGDIQGAFKLKDQMVALGIS--LD-----DAAECAMVRGLALC------- 924

Query: 187  SMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTY 246
              +E+ + +  +MLR   +P       ++ V        +A  +  +M  + +K  IV Y
Sbjct: 925  GKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAY 984

Query: 247  NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
            N ++ + C  G++  AL+   E++ +G  PN  TY VL++  S    + +   +++D+  
Sbjct: 985  NVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLND 1044

Query: 307  LGL 309
             GL
Sbjct: 1045 RGL 1047


>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 160/497 (32%), Positives = 248/497 (49%), Gaps = 4/497 (0%)

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           VY  + + G+ P  VTYNTM+ S+CKEG++  A      +   G  P   T N L+ G+ 
Sbjct: 170 VYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYC 229

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           R GEL +A  L   M  +G + + +SY  +I G  E   + EAL L   M   G +P + 
Sbjct: 230 RTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVR 289

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
            +  LI GLCK GRV DAR  F  M +  V+P +++YN ++ GY + G + +A  + + +
Sbjct: 290 AFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELM 349

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
                 P   TYNTLI GLC     E A++L  N + +G  P V+T+T ++NG C     
Sbjct: 350 EKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKF 408

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A    N+M+    + D   +   I   +K     EA  L  E+ A G  P++ITY  +
Sbjct: 409 DDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSI 468

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           + G CK G ++ A E+L+ M  DG  P+  TY S+++  ++   L +   L   M + G+
Sbjct: 469 IDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGI 528

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
            P ++TYT L+         + AF  F  M+  G++P+   Y  L + LC+  R ++AY 
Sbjct: 529 IPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYS 588

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQL 709
             +    +G+   K  YT LI+    AGN   A  L + M+D    PD  T+S LL    
Sbjct: 589 FIV---RKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALC 645

Query: 710 DKDYKVHAVEYLESLTL 726
            +     A+  L+ ++L
Sbjct: 646 KQKRLNEALPILDQMSL 662



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 192/657 (29%), Positives = 299/657 (45%), Gaps = 27/657 (4%)

Query: 79  VSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIES- 137
           V+D F+A  + PE            P  AL FF W+  + G +        +L +L    
Sbjct: 57  VADLFRAESTAPE------------PATALAFFEWLARRDGFRHTADSHAALLHLLSRRR 104

Query: 138 GLLRSAYWVVETVVC--------VNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMV 189
              +    VV  + C        V+   I  +   G     +S K  +  L    +  M 
Sbjct: 105 APAQYERLVVSMLNCSDTAEDMRVSADAIQAIRRTGSARLALSPKCYNFALRSLARFDMT 164

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           E    V+++++++GLLPD    N +IK     G    A   +R++ E G++P   T N +
Sbjct: 165 EYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNAL 224

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           +  +C+ GE+++A  L   M   GC  N  +Y +LI G      + +A  L   M + G 
Sbjct: 225 VLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGC 284

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
             +  ++  +I G  + G + +A  L + M   GV P++ TYN +I G  K GR++DA  
Sbjct: 285 SPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDAL- 343

Query: 370 RFFEMLRKN-VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
           +  E++ KN   PD  +YNTL+YG C      EA  L +        PTVVT+  LI+G 
Sbjct: 344 KIKELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGY 402

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C     + A ++K  M++     D+  +  ++N   K   L  A+E  NE+   GL P+ 
Sbjct: 403 CMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNV 462

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             YT+ I G  K G    A  + + M   G  P+  TYN L++GL K   L +A  LL K
Sbjct: 463 ITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTK 522

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M  DG IP+ ITYT+++    +  D      LF  M + GL P    Y VL  A    GR
Sbjct: 523 MQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGR 582

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
            E A+ +      KG+    + Y  LI+G  +    D A  L   M +EG  P+ YTY++
Sbjct: 583 AEEAYSFIVR---KGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSV 639

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
           L++  C      EAL +  +M  R I+     ++ L+ + L +    HA      +T
Sbjct: 640 LLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMT 696



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 163/518 (31%), Positives = 254/518 (49%), Gaps = 39/518 (7%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V + L++F  M R+G  P+V+    +I  L  +G    AR ++  M + G+ PS++TYN 
Sbjct: 269 VREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNA 328

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           M+  + K G M +AL++   M+  GC P+  TYN LI G   + + E+A  L+ + +K G
Sbjct: 329 MIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEG 387

Query: 309 LKVSAHSYNPIICGYS-----------------------------------EKGLLVEAL 333
              +  ++  +I GY                                    +K  L EA 
Sbjct: 388 FTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAK 447

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
            L  E+   G+ P + TY  +I G CK G+V  A      M R    P+  +YN+L+YG 
Sbjct: 448 ELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGL 507

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
            +   + +A  L  +++   ++P V+TY TL+ G C   D + A +L E M   G+ PD 
Sbjct: 508 VKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDE 567

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
             Y ++ +  CK G    A E ++ ++RKG+   +  YTT I G  K G+T  A  L E 
Sbjct: 568 HAYAVLTDALCKAGR---AEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIER 624

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           M+ +G  PD  TY+VL+H LCK   L EA  +L +M   G       YT +I   L  G 
Sbjct: 625 MIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGK 684

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
               + ++N M   G  P+  TYTV I+++   GRLE A     +M+ +G+ P+V+TYN 
Sbjct: 685 HDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNI 744

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
           LI+G   +  ID+A+     M      PN +TY +L+ 
Sbjct: 745 LIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLK 782



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 160/574 (27%), Positives = 264/574 (45%), Gaps = 51/574 (8%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           S+   + +++ Y+K   +   L +   M +NG  PD    N +I  L D   + +A E+ 
Sbjct: 322 SVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQK-TEEAEELL 380

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
               + G  P++VT+  +++ +C   +  +AL +  +M    C  +   +  LI    + 
Sbjct: 381 NNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKK 440

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
             L++A+ L+ ++   GL  +  +Y  II GY + G +  AL + + M   G  P   TY
Sbjct: 441 DRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTY 500

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           N L+YGL K  ++  A     +M +  +IP++I+Y TLL G C   +   AF LF+ +  
Sbjct: 501 NSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQ 560

Query: 412 RNLVP--------------------------------TVVTYNTLIDGLCRYGDLEVAQQ 439
             L P                                T V Y TLIDG  + G+ + A  
Sbjct: 561 NGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAAT 620

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           L E MI++G  PD  TY+++++  CK   L+ A    ++M  +G++   FAYT  I   L
Sbjct: 621 LIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEML 680

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           + G    A R+  EM + G  P   TY V ++  CK G LE+A +L+ KM  +G  PD +
Sbjct: 681 REGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVV 740

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG------------ 607
           TY  +I     MG + R       M+     P   TY +L+  H  +G            
Sbjct: 741 TYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLK-HLLKGNLAYVRSVDTSG 799

Query: 608 -----RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
                 L++ +     M   G+ P V TY++LI G C+  R+++A  L   M  +G+ PN
Sbjct: 800 MWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPN 859

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
           +  YT+LI   C+   +++AL     M +   +P
Sbjct: 860 EDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQP 893



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 151/526 (28%), Positives = 254/526 (48%), Gaps = 21/526 (3%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y      +  L + NKM+ +    D++   ++I  L       +A+E+   +   G+ P+
Sbjct: 402 YCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPN 461

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           ++TY +++D +CK G++  ALE+L  M+  GC PN  TYN L+ G  ++ +L +A  L+ 
Sbjct: 462 VITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLT 521

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M K G+  +  +Y  ++ G  ++     A  L E M   G+ P    Y +L   LCK G
Sbjct: 522 KMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG 581

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R  +A   +  ++RK V    + Y TL+ G+ ++GN   A  L + +      P   TY+
Sbjct: 582 RAEEA---YSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYS 638

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            L+  LC+   L  A  + + M  +GI   +  YTI+++   + G    A+  +NEM   
Sbjct: 639 VLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSS 698

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G +P    YT  I    K G   +A  L  +M  +G  PD++TYN+L+ G   +G ++ A
Sbjct: 699 GHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRA 758

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD-----------------LFNNML 585
              L++MVG    P++ TY  ++   L+ G+L   R                  L   M+
Sbjct: 759 FSTLKRMVGASCEPNYWTYCLLLKHLLK-GNLAYVRSVDTSGMWNLIELDITWQLLERMV 817

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
           + GL+PT+ TY+ LI      GRLE A +    M  KG+ PN   Y  LI   C  +  +
Sbjct: 818 KHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFE 877

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           +A      M E G  P   +Y +L+   CN G++++   L+ ++L+
Sbjct: 878 KALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLE 923



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 152/527 (28%), Positives = 242/527 (45%), Gaps = 20/527 (3%)

Query: 168 SSC-VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
           S C + +++   L+    KK  +++   + N++  NGL+P+V     II     +G    
Sbjct: 421 SKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDI 480

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A EV +MM   G +P+  TYN+++    K+ ++ +A+ LL +MQ  G  PN +TY  L+ 
Sbjct: 481 ALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQ 540

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G     + + A  L   M + GLK   H+Y  +     + G   EA +    +V +GVA 
Sbjct: 541 GQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF---IVRKGVAL 597

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
           T   Y  LI G  K G    A      M+ +   PD  +Y+ LL+  C+   + EA  + 
Sbjct: 598 TKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPIL 657

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
           D++  R +  T+  Y  LID + R G  + A+++   M + G  P   TYT+ +N  CK 
Sbjct: 658 DQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKE 717

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G L  A +   +M R+G+ PD   Y   I G   +G    A+   + M+     P+  TY
Sbjct: 718 GRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTY 777

Query: 527 NVLVH----------------GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
            +L+                 G+  L  L+   +LL +MV  G  P   TY+S+I    +
Sbjct: 778 CLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCK 837

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
            G L     L ++M  KGLSP    YT+LI         E A  + S M   G +P + +
Sbjct: 838 AGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLES 897

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
           Y  L+ GLC     ++   LF D+ E G   ++  + IL +    AG
Sbjct: 898 YRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAG 944



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 135/506 (26%), Positives = 224/506 (44%), Gaps = 19/506 (3%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K   V+  L V   M R+G  P+    N ++  L  +    KA  +   M + GI P+
Sbjct: 472 YCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPN 531

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           ++TY T+L   C E +   A  L   M+  G  P+   Y VL     + G  E+A   I 
Sbjct: 532 VITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI- 590

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
             ++ G+ ++   Y  +I G+S+ G    A  L E M+  G  P   TY++L++ LCK  
Sbjct: 591 --VRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQK 648

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R+++A     +M  + +   I +Y  L+    R G    A  +++E+ S    P+  TY 
Sbjct: 649 RLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYT 708

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
             I+  C+ G LE A+ L   M  +G+ PDV+TY I+++G   MG +  A      M+  
Sbjct: 709 VFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGA 768

Query: 483 GLQPDRFAY----------------TTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
             +P+ + Y                +   +G   L +    ++L E M+  G  P + TY
Sbjct: 769 SCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTY 828

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           + L+ G CK G LEEA  LL  M G G  P+   YT +I    +     +     + M  
Sbjct: 829 SSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSE 888

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
            G  P L +Y +L+      G  E     F ++   G   + + +  L +GL +   +D 
Sbjct: 889 CGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDI 948

Query: 647 AYGLFIDMEEEGILPNKYTYTILINE 672
            + +   ME+     +  TY ++ N+
Sbjct: 949 CFQMLSIMEKRYCCISSQTYALVTNK 974


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 149/489 (30%), Positives = 257/489 (52%), Gaps = 21/489 (4%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G + S+ TYN  LD+  K    Q A E   +MQ RG  P+  TY++++ G  + GEL++A
Sbjct: 33  GYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKA 92

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM-VTRGVAPTLATYNILIY 356
           + L+  + + G+K++  +Y+ +I G  +   + +AL + + M    G  P + T+N L+ 
Sbjct: 93  KELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLK 152

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           GLC   R+S+A   F  M +    P++ISY+TLL G C++G + EA  L++E+  ++ VP
Sbjct: 153 GLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVP 212

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI-----------------M 459
            +V Y + + GLC+   +  A      M+ +G   D + ++                  M
Sbjct: 213 DLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQM 272

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA-KG 518
           +   C+ G L  A + F EM+ +   P    + T I    K     +   L + M + K 
Sbjct: 273 IEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKE 332

Query: 519 F--PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
           F  PP+L TYN++V  LCK   L+EA EL+ +M   G  PD +TY++++    ++G L R
Sbjct: 333 FYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDR 392

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
             DL   M ++G+ P   T   +++A +  G+++ A  +   M+ +G  P+++TYN L++
Sbjct: 393 ACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLD 452

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
           GLC+  RID+A      M      P+ ++YTI+I   C +G    A  +++EM+ R + P
Sbjct: 453 GLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLP 512

Query: 697 DYCTHSALL 705
           D   + +LL
Sbjct: 513 DTVLYHSLL 521



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 167/584 (28%), Positives = 277/584 (47%), Gaps = 46/584 (7%)

Query: 108 LRFFRWVETQPGVKRDEFVFCTILEILIESG-----------LLRSAYWVVETVVCVNMH 156
           +R F W+  Q G +   F +   L+ L ++            + R  Y   +    + + 
Sbjct: 22  VRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLR 81

Query: 157 GILDV--------LIGGGLSSCVSIKILDLLLLI--YTKKSMVEQCLLVFNKM-LRNGLL 205
           G+           L+G    S V + ++   ++I    K S V+  L +F  M    G +
Sbjct: 82  GLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCV 141

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           PDV   N ++K L       +A  ++  M + G +P++++Y+T+LD  CK G + EA  L
Sbjct: 142 PDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRL 201

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
             EM  + C P+ V Y   +TG  +   + +A    R M+  G K  A +++ +I     
Sbjct: 202 WEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVI----- 256

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
            G+L +  + EE              N +I  LC+ G + +A   F EM+ +N  P    
Sbjct: 257 -GILCKKGHAEE------------AQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAEL 303

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRN---LVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
           +NTL++  C+S  + +  LLF  ++S       P + TYN ++D LC+   L+ AQ+L  
Sbjct: 304 FNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVN 363

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            M N G+ PDV+TY+ +V+G CK+G L  A +   EM ++G+ PD F   + +    K G
Sbjct: 364 EMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAG 423

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
               A    E M A+G  PDL+TYN L+ GLCK G ++EA   L KMV     PD  +YT
Sbjct: 424 KVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYT 483

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
            II A    G       +F  M+++G+ P  V Y  L+   A  G  +LA      ++  
Sbjct: 484 IIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALEL---LKTS 540

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
             +P+ + +  +++GLC+  + + A  +   M + G   + +TY
Sbjct: 541 LCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTY 584



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 160/527 (30%), Positives = 248/527 (47%), Gaps = 59/527 (11%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
           F +M R G  PD    + +++ L   G   KA+E+   + E G+K +++TY+ ++D  CK
Sbjct: 61  FQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCK 120

Query: 256 EGEMQEALELLWEMQ-GRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
              + +ALE+   M  G GC P+ VT+N L+ G      + +A  L   M K G + +  
Sbjct: 121 ASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVI 180

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           SY+ ++ G  + G L EA  L EEMV +   P L  Y   + GLCK  RV++A     +M
Sbjct: 181 SYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKM 240

Query: 375 LRKNVIPDIISYNTLL-----YGY------------CRSGNIGEAFLLFDELRSRNLVPT 417
           + K    D ++++T++      G+            CRSG + EA   F+E+ SRN  P+
Sbjct: 241 VTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPS 300

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL---PDVITYTIMVNGSCKMGNLSMARE 474
              +NTLI  +C+   L     L + M +       P++ TY IMV+  CK   L  A+E
Sbjct: 301 AELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQE 360

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
             NE                                   M   G  PD++TY+ LV GLC
Sbjct: 361 LVNE-----------------------------------MANYGLSPDVVTYSALVDGLC 385

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           KLG L+ A +LL +M  +G  PD  T  SI++A  + G +         M  +G +P LV
Sbjct: 386 KLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLV 445

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           TY  L+      GR++ A  + ++M      P+V +Y  +I  LCR  +   A+ +F +M
Sbjct: 446 TYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEM 505

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
            + G+LP+   Y  L++     G    AL L K  L    +PD+  H
Sbjct: 506 VKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSL---CKPDFVMH 549



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 197/419 (47%), Gaps = 23/419 (5%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   +++   ++ +M+    +PD+      +  L       +A +  R M   G K   V
Sbjct: 191 KAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAV 250

Query: 245 TYNT-----------------MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITG 287
            ++T                 M++  C+ G + EA +   EM  R   P+   +N LI  
Sbjct: 251 AFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHA 310

Query: 288 FSRNGELEQARGL---IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
             ++  L     L   ++ M +     +  +YN ++    +   L EA  L  EM   G+
Sbjct: 311 VCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGL 370

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
           +P + TY+ L+ GLCK G++  A     EM ++ V PD  +  ++L    ++G +  A  
Sbjct: 371 SPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALS 430

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
             + +++R   P +VTYNTL+DGLC+ G ++ A      M+     PDV +YTI++   C
Sbjct: 431 HLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALC 490

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
           + G  + A   F EM+++G+ PD   Y + + G  + G    A  L +  L K   PD +
Sbjct: 491 RSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCK---PDFV 547

Query: 525 TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
            + ++V GLCK G  E+A E++ +M   GF  D  TY +++    ++G + + R L ++
Sbjct: 548 MHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQLVDD 606



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 145/300 (48%), Gaps = 32/300 (10%)

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
           + M EF   P++ TYN M+D+ CK  ++ EA EL+ EM   G SP+ VTY+ L+ G  + 
Sbjct: 328 KSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKL 387

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G+L++A  L+ +M K G+   + +   I+   S+ G +  AL+  E M  RG  P L TY
Sbjct: 388 GKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTY 447

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           N L+ GLCK GR+ +A     +M+     PD+ SY  ++   CRSG    A  +F E+  
Sbjct: 448 NTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVK 507

Query: 412 RNLVPTVVTYNTL--------------------------------IDGLCRYGDLEVAQQ 439
           R ++P  V Y++L                                +DGLC+ G  E A +
Sbjct: 508 RGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCKPDFVMHKMVVDGLCKAGKAEDACE 567

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           + E M + G   D  TY  +V G  K+G +  AR+  ++        +R +     AG L
Sbjct: 568 VVERMADAGFPADAFTYINVVRGLRKLGKVDKARQLVDDASETHTSVERLSMEKAEAGAL 627



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 64/121 (52%), Gaps = 1/121 (0%)

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
           +KG   ++ TY   + A A     +LA+  F +MQ +G  P+  TY+ ++ GLC+   +D
Sbjct: 31  QKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELD 90

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM-LDREIEPDYCTHSAL 704
           +A  L   + E G+  N  TY+++I+  C A    +AL ++K M       PD  T ++L
Sbjct: 91  KAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSL 150

Query: 705 L 705
           L
Sbjct: 151 L 151


>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  262 bits (670), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 171/599 (28%), Positives = 286/599 (47%), Gaps = 48/599 (8%)

Query: 116 TQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKI 175
           ++ G+  DEF      + L + G  R A  ++E    V    + + +I G          
Sbjct: 268 SELGLSMDEFTLGFFAQALCKVGKWREALSLIEKEDFVPNTILYNKMISG---------- 317

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
                    + S  E+ +   N+M     +P+V+    ++    +     + + +  MM 
Sbjct: 318 -------LCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMI 370

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL- 294
             G  PS   +N+++ ++CK  +   A +LL +M+   C P  V YN+LI      GEL 
Sbjct: 371 AEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELP 430

Query: 295 -----EQARGLIRDMLKLGL---KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
                E A     +ML  G    KV+  S+   +CG+   G   +A  +  EM+  G  P
Sbjct: 431 GPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGF---GKFEKAYKVIHEMMGNGFVP 487

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
             +TY+ +I  LC   RV +A   F EM    V+PD+ +Y  L+  + ++G I +A    
Sbjct: 488 DTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWL 547

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
           DE+      PTVVTY TLI    +   + VA +L E MI +G  P+VITYT +++G CK 
Sbjct: 548 DEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKS 607

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           GN+  A + +  M                 G+  + D    ++++  +  K   P+++TY
Sbjct: 608 GNIEKACQIYARM----------------RGDADIPDVDMYFKIKNNVAEK---PNVVTY 648

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
             LV GLCK   +++A +LL  M  DG  P+ I Y ++I    +   L   +++F+ M+ 
Sbjct: 649 GALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVE 708

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
            G +P + TY+ LI       RL+L     S+M      PN++ Y  +I+GL ++ + D+
Sbjct: 709 HGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDE 768

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           AY L + MEE+G  PN  TYT +I+    AG   + L L++EM  +   P++ T++ L+
Sbjct: 769 AYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLI 827



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 175/638 (27%), Positives = 299/638 (46%), Gaps = 72/638 (11%)

Query: 112 RWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCV 171
           +W E    +++++FV  TIL   + SGL  ++++             +D L     +SC+
Sbjct: 291 KWREALSLIEKEDFVPNTILYNKMISGLCEASFF----------EEAMDFLNRMRSTSCI 340

Query: 172 -SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV-LRDNGFSVKARE 229
            +++   +LL     K  + +C  + + M+  G  P     N ++    + + FS  A +
Sbjct: 341 PNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSY-AYK 399

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEM------------------------------ 259
           + + M +   KP  V YN ++ S C  GE+                              
Sbjct: 400 LLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVS 459

Query: 260 -----------QEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
                      ++A +++ EM G G  P+  TY+ +I        +E A  L ++M   G
Sbjct: 460 FARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTG 519

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           +    ++Y  +I  +S+ G++ +A N  +EMV  G  PT+ TY  LI+   K  +VS A 
Sbjct: 520 VVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVAN 579

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS-------------RNLV 415
             F  M+ K   P++I+Y  L+ GYC+SGNI +A  ++  +R              +N V
Sbjct: 580 ELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNV 639

Query: 416 ---PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
              P VVTY  L+DGLC+   ++ A+ L E M   G  P+ I Y  +++G CK   L  A
Sbjct: 640 AEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEA 699

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
           +E F++M+  G  P+ + Y++ I    K        ++  +ML     P+++ Y  ++ G
Sbjct: 700 QEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDG 759

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           L K+   +EA +L+  M   G  P+ +TYT++I    + G + +  +LF  M  KG +P 
Sbjct: 760 LSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPN 819

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
            VTYTVLI+   A G L+ A+    EM+      +V +Y  +I G    R    + GL  
Sbjct: 820 FVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY--KREFILSLGLLE 877

Query: 653 DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           ++E+ G  P    Y +LI+    AG  + AL L+KE++
Sbjct: 878 EVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVI 915



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 150/526 (28%), Positives = 246/526 (46%), Gaps = 26/526 (4%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           E+   V ++M+ NG +PD    + +I  L +      A  +++ M   G+ P + TY  +
Sbjct: 471 EKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTIL 530

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           +D F K G +++A   L EM   GC P  VTY  LI  + +  ++  A  L   M+  G 
Sbjct: 531 IDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGC 590

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEM--------------VTRGVA--PTLATYNI 353
             +  +Y  +I GY + G + +A  +   M              +   VA  P + TY  
Sbjct: 591 FPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGA 650

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           L+ GLCK  +V DAR     M      P+ I Y+ L+ G+C++  + EA  +F ++    
Sbjct: 651 LVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHG 710

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
             P V TY++LID L +   L++  ++   M+     P+++ YT M++G  K+     A 
Sbjct: 711 YNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAY 770

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
           +    M  KG +P+   YT  I G  K G   +   L  EM +KG  P+ +TY VL++  
Sbjct: 771 KLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHC 830

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHI-TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           C  G L+EA  LL +M    + P H+ +Y  +I        L  G  L   + + G +P 
Sbjct: 831 CATGHLDEAYALLEEM-KQTYWPKHVSSYCKVIEGYKREFILSLG--LLEEVEKNGSAPI 887

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGI----RPNVITYNALINGLCRLRRIDQAY 648
           ++ Y VLI      GRLE+A     E+    +    + N+  Y +LI       +I  A+
Sbjct: 888 ILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNL--YTSLIYSFSYASKIGHAF 945

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
            LF DM  +G++P+  T+  L+        W+EAL+L   +   +I
Sbjct: 946 ELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSLCQMDI 991



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 134/535 (25%), Positives = 212/535 (39%), Gaps = 57/535 (10%)

Query: 204 LLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEAL 263
           +L  V+NC        D+GF  K   V R   +  + P +V     + SF K  E+    
Sbjct: 110 ILDAVRNC--------DDGFGEKTHIVLRQFRQ-KLNPDLVV---EILSFLKSPELCVKF 157

Query: 264 ELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGY 323
             LW  +  G       Y  L+  F R          +R++     +V     N +I   
Sbjct: 158 -FLWAGRQIGYDHTPAVYIALLDVFERGSYDRVPEEFLREIRGDDKEVLGKLLNVLIRKC 216

Query: 324 SEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
              GL   AL     +   G  PT  TYN L+    +  ++  A+    EM    +  D 
Sbjct: 217 CRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDE 276

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
            +        C+ G   EA  L ++    + VP  + YN +I GLC     E A      
Sbjct: 277 FTLGFFAQALCKVGKWREALSLIEK---EDFVPNTILYNKMISGLCEASFFEEAMDFLNR 333

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           M +   +P+V TY I++ G      L   +   + M+ +G  P    + + +    K  D
Sbjct: 334 MRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDD 393

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHG------------------------------- 532
            S AY+L ++M      P  + YN+L+                                 
Sbjct: 394 FSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLN 453

Query: 533 ----------LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
                     LC  G  E+A +++ +M+G+GF+PD  TY+ +I        +     LF 
Sbjct: 454 KVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFK 513

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
            M   G+ P + TYT+LI   +  G ++ A  +  EM   G  P V+TY  LI+   + +
Sbjct: 514 EMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAK 573

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           ++  A  LF  M  +G  PN  TYT LI+  C +GN ++A ++Y  M      PD
Sbjct: 574 KVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPD 628



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 141/284 (49%), Gaps = 23/284 (8%)

Query: 182 IYTKKSMVEQ---------CLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR 232
           +YT  S++++          L V +KML N   P++     +I  L     + +A ++  
Sbjct: 715 VYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLML 774

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
           MM E G KP++VTY  M+D F K G++ + LEL  EM  +GC+PN VTY VLI      G
Sbjct: 775 MMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATG 834

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
            L++A  L+ +M +        SY  +I GY  + +L  +L L EE+   G AP +  Y 
Sbjct: 835 HLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFIL--SLGLLEEVEKNGSAPIILLYK 892

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS-------YNTLLYGYCRSGNIGEAFLL 405
           +LI    K GR+  A       L K VI   +S       Y +L+Y +  +  IG AF L
Sbjct: 893 VLIDNFVKAGRLEVALE-----LHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFEL 947

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
           F ++    ++P + T+  L+ GL R    E A QL +++    I
Sbjct: 948 FYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSLCQMDI 991



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 79/198 (39%), Gaps = 3/198 (1%)

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           NVL+   C+ G    A E L ++   G+ P  +TY +++   L    L   + +   M  
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSE 269

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
            GLS    T      A    G+   A    S ++ +   PN I YN +I+GLC     ++
Sbjct: 270 LGLSMDEFTLGFFAQALCKVGKWREAL---SLIEKEDFVPNTILYNKMISGLCEASFFEE 326

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
           A      M     +PN  TY IL+    N        R+   M+     P Y   ++L+ 
Sbjct: 327 AMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVH 386

Query: 707 KQLDKDYKVHAVEYLESL 724
                D   +A + L+ +
Sbjct: 387 AYCKSDDFSYAYKLLKKM 404


>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 613

 Score =  262 bits (670), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 145/465 (31%), Positives = 249/465 (53%)

Query: 174 KILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRM 233
           K+ D+L  +Y   SM E+   VF+ M+ NGL  D ++C   +  L+ +   V +   ++ 
Sbjct: 146 KLCDMLFRVYVDNSMFEEGFKVFDYMVHNGLKIDDRSCIVCLLALKRSDQMVMSLGFFKK 205

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M EF +  ++ +   ++D  CK+G ++ A +L+ EM G+G  PN VTYN L+  + +  +
Sbjct: 206 MVEFKVDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMD 265

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
            E    ++R M    +  +A +Y  +I  Y   G + EA  + E+M+ RGV   +  +  
Sbjct: 266 FEGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTS 325

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           +I   CK G +  A   F E+  + ++ +  +Y  L++G C SG +  A +L +E++S+ 
Sbjct: 326 IISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQG 385

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           L   +V +NTLI+G C+ G ++ A ++++ M  +G   D+ TY  +  G CK+     A+
Sbjct: 386 LDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAK 445

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
            +   M+ KG+ P+  ++T  I    K G+  EA R+ ++M  KG  P+++TYN L+ G 
Sbjct: 446 RWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGY 505

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
            K G L+EA  L  +M   G   D  TYT+++H     G +     L N + RKGL+ ++
Sbjct: 506 SKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISI 565

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           VTYT +I   +  GR E AF  + EM   G+ P+   Y +L+  L
Sbjct: 566 VTYTAIISGLSKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLVANL 610



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/446 (28%), Positives = 226/446 (50%)

Query: 260 QEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI 319
           +E  ++   M   G   +  +  V +    R+ ++  + G  + M++  + V+ +S   +
Sbjct: 162 EEGFKVFDYMVHNGLKIDDRSCIVCLLALKRSDQMVMSLGFFKKMVEFKVDVTVYSMTIV 221

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           I G  +KG +  A +L  EM  +G+ P + TYN L+    K             M    V
Sbjct: 222 IDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLMEMDKV 281

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
           + +  +Y  L+  Y  SG I EA  +F+++  R +   +  + ++I   C+ G+++ A  
Sbjct: 282 VYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFA 341

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           L + +  +G++ +  TY  +++G+C  G L  A    NEM  +GL  +   + T I G  
Sbjct: 342 LFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYC 401

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           K G   EA R+Q+ M  KGF  D+ TYN +  GLCKL   EEA   L  MV  G  P+ +
Sbjct: 402 KKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAV 461

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
           ++T +I    + G+L     +F +M +KG  P +VTY  LI  ++ +G+L+ A+    EM
Sbjct: 462 SFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEM 521

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
           +  G+  ++ TY  L++G C   ++++A  L  ++  +G+  +  TYT +I+     G  
Sbjct: 522 ESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRS 581

Query: 680 QEALRLYKEMLDREIEPDYCTHSALL 705
           +EA RLY EM+   + PD   +++L+
Sbjct: 582 EEAFRLYDEMMAAGLTPDDRVYTSLV 607



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 115/315 (36%), Positives = 177/315 (56%)

Query: 221 NGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVT 280
           +G   +A +V+  M E G++  I  + +++   CK G M+ A  L  E+  RG   N  T
Sbjct: 298 SGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHT 357

Query: 281 YNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV 340
           Y  LI G   +G+L+ A  L+ +M   GL ++   +N +I GY +KG++ EAL +++ M 
Sbjct: 358 YGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVME 417

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
            +G    + TYN +  GLCK  R  +A+   F M+ K V P+ +S+  ++  +C+ GN+ 
Sbjct: 418 KKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLV 477

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           EA  +F +++ +   P VVTYNTLIDG  + G L+ A +LK+ M + G+  D+ TYT +V
Sbjct: 478 EAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLV 537

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
           +G C  G +  A    NE+ RKGL      YT  I+G  K G + EA+RL +EM+A G  
Sbjct: 538 HGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGLT 597

Query: 521 PDLITYNVLVHGLCK 535
           PD   Y  LV  L K
Sbjct: 598 PDDRVYTSLVANLHK 612



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 54/162 (33%), Positives = 92/162 (56%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           M+  G+ P+  +   +I +    G  V+A  V++ M + G KP++VTYNT++D + K+G+
Sbjct: 451 MVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGK 510

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           ++EA  L  EM+  G + +  TY  L+ G    G++E+A  L+ ++ + GL +S  +Y  
Sbjct: 511 LKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTA 570

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           II G S++G   EA  L +EM+  G+ P    Y  L+  L K
Sbjct: 571 IISGLSKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLVANLHK 612


>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 162/609 (26%), Positives = 304/609 (49%), Gaps = 81/609 (13%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           S++  ++L+  Y +   + + + +   M   G  PD+   N ++     NGF  K  +++
Sbjct: 16  SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLM-----NGF-CKIGDLF 69

Query: 232 ---RMMGEFGI---KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
              ++MGE  +   +P+++TY T++D++CK   +++AL +  EM  +   P+ VTY  ++
Sbjct: 70  TAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIM 129

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            G  ++G++E+A+ + R+M ++G+  +  SY  +I    ++G + EA  L+  MV RG+ 
Sbjct: 130 NGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIG 189

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
             +  Y  L+ GL K G  ++A   F  +L ++++P+ ++Y+ L+ G+C+ G++ +  LL
Sbjct: 190 FDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELL 249

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
             E+  +++ P V+ Y++++DG  + G L  A  +   M+ + ILP+V  Y  +++G  K
Sbjct: 250 LQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFK 309

Query: 466 M-----------------------------------GNLSMAREFFNEMLRKGLQPDRFA 490
                                               G +  A E F +M+ +GL PDR  
Sbjct: 310 ADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVN 369

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL----------------- 533
           YT+ + G  K G  S+A+ + +EM  K    D++ YNVL++GL                 
Sbjct: 370 YTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQ 429

Query: 534 -----------------CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
                            CK G+L  A +LL +M   G  P+ IT   ++      G++ +
Sbjct: 430 LGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEK 489

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
             DL N+ML  G  PT  T+  ++ A +   R ++      ++   G++ ++ TYN LI+
Sbjct: 490 TMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLIS 549

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
             CRL  I +A  +F DM  +GIL +  TY  LI+  C + + ++A  ++ +ML   + P
Sbjct: 550 TFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSP 609

Query: 697 DYCTHSALL 705
           +  T++ LL
Sbjct: 610 NVETYNILL 618



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 139/467 (29%), Positives = 248/467 (53%), Gaps = 1/467 (0%)

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           I+ S+  +N ++D +C+ GE+  A+ELL  M+  G +P+ VTYN L+ GF + G+L  A+
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L+ ++  + L+ +  +Y  +I  Y +   L +AL + +EM  + + P + TY  ++ GL
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           CK G+V +A+  F EM    V+P+  SY TL+    + GN+ EAF+L   +  R +   V
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           V Y  L+DGL + G    A+ + + ++ + ++P+ +TY+ +++G CK+G+++       E
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M  K + P+   Y++ + G  K G  +EA  +  +M+ +   P++  Y  L+ G  K   
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQ 312

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
              A +L ++M   G   ++    S ++     G +    +LF +M+ +GL P  V YT 
Sbjct: 313 RGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTS 372

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           ++      G+   AF    EM  K    +V+ YN LINGL +L +  ++      M + G
Sbjct: 373 MMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLG 431

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           + P+  T+  +IN  C  GN   AL+L  EM    ++P+  T + L+
Sbjct: 432 LAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILV 478



 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 174/674 (25%), Positives = 314/674 (46%), Gaps = 57/674 (8%)

Query: 72  AFCNNRWVSDHF--------QAVVSDPELLVRVLNRIREKPRI--ALRFFRWVETQPGVK 121
           A+C ++ + D          +++V D      ++N + +  ++  A   FR +E + GV 
Sbjct: 96  AYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREME-EVGVV 154

Query: 122 RDEFVFCTILEILIESGLLRSAYWVVETVVC-------VNMHGILDVLIGGGLSSCVSIK 174
            + F + T+++ L + G +  A+ +   +V        V    ++D L   G+++     
Sbjct: 155 PNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNA--- 211

Query: 175 ILDLLLLIYTKKSMVEQCL-------------------LVFNKMLRNGLLPDVKNCNRII 215
             + +  +  ++S+V  C+                   L+  +M    + P+V   + I+
Sbjct: 212 --EDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIV 269

Query: 216 KVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCS 275
                 G   +A +V R M +  I P++  Y T++D + K  +   AL+L  EM+ RG  
Sbjct: 270 DGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLE 329

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
            N    +  +    R+G +E+A  L +DM+  GL     +Y  ++ G+ + G   +A N+
Sbjct: 330 ENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNI 389

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRV-SDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
            +EM  +     +  YN+LI GL K G+  S++ H     L   + PD  ++NT++  YC
Sbjct: 390 AQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQL--GLAPDSATFNTMINAYC 447

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
           + GN+G A  L +E++S  L P  +T N L+  LC  G++E    L  +M+  G  P   
Sbjct: 448 KEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPT 507

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
           T+  +++ S K     +     ++++  G++ D   Y T I+   +LG    A  + ++M
Sbjct: 508 THKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDM 567

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
           + KG   D+ITYN L+HG C    L++A  +  +M+ +G  P+  TY  ++        +
Sbjct: 568 MGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLI 627

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
           +    L N M  +GL P   TY +L+  H   G ++     + EM  KG  P   TYN L
Sbjct: 628 KEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVL 687

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI------------NENCNAGNWQEA 682
           I+   + +++ QA  L  +M+  GI PN  TY ILI            N++       EA
Sbjct: 688 ISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEA 747

Query: 683 LRLYKEMLDREIEP 696
            RL++EM ++   P
Sbjct: 748 KRLFEEMNEKGFIP 761



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 219/459 (47%), Gaps = 46/459 (10%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL---------------- 218
           ++D  +    +   +E+   +F  M+  GLLPD  N   ++                   
Sbjct: 334 VIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEM 393

Query: 219 --RDNGFSVKAREV----------------YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQ 260
             + +GF V A  V                +  M + G+ P   T+NTM++++CKEG + 
Sbjct: 394 TEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLG 453

Query: 261 EALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII 320
            AL+LL EM+  G  PN +T N+L+      GE+E+   L+ DML +G   +  ++  ++
Sbjct: 454 NALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVL 513

Query: 321 CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
              S+       L+  +++V  GV   L+TYN LI   C+ G +  A   F +M+ K ++
Sbjct: 514 DASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGIL 573

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
            DII+YN L++GYC S ++ +AF +  ++ +  + P V TYN L+ GL     ++ A  L
Sbjct: 574 ADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGL 633

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
              M  +G++P+  TY I+V+G  K+GN+    + + EM+ KG  P    Y   I+   K
Sbjct: 634 VNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAK 693

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK------------ 548
               S+A  L +EM  +G PP+  TY++L+ G  KL    E N+ L++            
Sbjct: 694 GKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEE 753

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
           M   GFIP   T   I     + G     + + N + +K
Sbjct: 754 MNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLYKK 792



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 94/308 (30%), Positives = 165/308 (53%)

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
           +V  +N LIDG CR G++  A +L E M  +G  PD++TY  ++NG CK+G+L  A++  
Sbjct: 16  SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM 75

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
            E+    L+P+   YTT I    K     +A  + +EM  K   PD++TY  +++GLCK 
Sbjct: 76  GEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKS 135

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G +EEA  + R+M   G +P+  +Y ++I +  + G++     L   M+ +G+   +V Y
Sbjct: 136 GKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVY 195

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
           T L+      G    A   F  +  + + PN +TY+ALI+G C+L  +++   L  +MEE
Sbjct: 196 TALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEE 255

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVH 716
           + I PN   Y+ +++     G   EA+ + ++M+ R I P+   +  L+      D +  
Sbjct: 256 KHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGI 315

Query: 717 AVEYLESL 724
           A++  + +
Sbjct: 316 ALDLFKEM 323



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 136/279 (48%), Gaps = 26/279 (9%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           GVK D   + T++      G++R A  V +           D++  G L+  ++    + 
Sbjct: 536 GVKLDLSTYNTLISTFCRLGMIRRATLVFK-----------DMMGKGILADIIT---YNA 581

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  Y   S +++   V ++ML  G+ P+V+  N ++  L       +A  +   M E G
Sbjct: 582 LIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERG 641

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           + P+  TY+ ++    K G M+E ++L  EM  +G  P   TYNVLI+ F++  ++ QA+
Sbjct: 642 LVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAK 701

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSE------------KGLLVEALNLEEEMVTRGVAP 346
            L+++M   G+  ++ +Y+ +ICG+ +            +    EA  L EEM  +G  P
Sbjct: 702 ELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIP 761

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
              T   + + L K G+ +DA+    ++ +K  + ++++
Sbjct: 762 CENTLACISFTLAKPGKKADAQRILNKLYKKKTVQELLA 800


>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 790

 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 172/602 (28%), Positives = 283/602 (47%), Gaps = 51/602 (8%)

Query: 89  DPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVE 148
           +P L+  VL R ++  RIAL FF W + Q   + D  V+ T+L+IL             +
Sbjct: 163 NPRLVCAVL-RSQDDERIALDFFYWADRQWRYRHDAIVYYTMLDIL------------SK 209

Query: 149 TVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDV 208
           T +C     IL ++   G+    S +    +++ Y++  M+   L +   M + G+ PD+
Sbjct: 210 TRLCQGARRILRLMTRRGIER--SPEAFSYVMVSYSRAGMLRNALRILTLMQKAGVEPDL 267

Query: 209 KNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWE 268
             CN  I VL       KA      M   GI+P IV+YN ++  +C    + +ALEL+ E
Sbjct: 268 SICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAE 327

Query: 269 MQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
           M  +GC P+ V+Y  ++    ++ ++E+ + L+ +M++                      
Sbjct: 328 MPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQ---------------------- 365

Query: 329 LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNT 388
                          + P   TYN LIY L K G   DA     E   K    D + Y+ 
Sbjct: 366 ------------NSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSA 413

Query: 389 LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
           ++  +C++ NI +A  L  ++ S+   P VVTY  +IDG CR G ++ A+++ + M   G
Sbjct: 414 VVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHG 473

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
             P+ +TYT+++NG C  G    ARE  N        P+   Y+  + G  + G  SEA 
Sbjct: 474 CKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEAC 533

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
            L  EM+ KGF P+ +  N+L+  LC+  ++  A + L + +  G   + + +TS+I+  
Sbjct: 534 DLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGF 593

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
            ++GDL     +  +M      P  +TYT L  A   + RL+ A     +M  KGI P  
Sbjct: 594 CQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTP 653

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
           +TY A+I+  C+  R+D    L   M      P K  Y  +I + C  GN +EA +L  +
Sbjct: 654 VTYRAVIHRFCQWGRVDDMMKLLEKMIARQ--PFKTVYNQVIEKLCYFGNREEAEKLLGK 711

Query: 689 ML 690
           +L
Sbjct: 712 VL 713



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 132/481 (27%), Positives = 244/481 (50%), Gaps = 1/481 (0%)

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
           ++ +L        AR + R+M   GI+ S   ++ ++ S+ + G ++ AL +L  MQ  G
Sbjct: 203 MLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRILTLMQKAG 262

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
             P+    N  I    +  +LE+A   +  M   G++    SYN +I GY +   + +AL
Sbjct: 263 VEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDAL 322

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR-KNVIPDIISYNTLLYG 392
            L  EM  +G  P   +Y  ++  LCK  +V + +     M++  N+IPD ++YNTL+Y 
Sbjct: 323 ELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYA 382

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
             + G+  +A +   E   +      V Y+ ++D  C+  +++ A+ L  +M ++G  PD
Sbjct: 383 LSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPD 442

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
           V+TYT +++G C++G +  A++   +M + G +P+   YT  + G    G + EA  +  
Sbjct: 443 VVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMIN 502

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
                 + P+ ITY+ ++HGL + G L EA +L R+M+  GF+P+ +    +I +     
Sbjct: 503 VSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQ 562

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
           ++   +      L KG +  +V +T +I+     G L+ A     +M +    P+ ITY 
Sbjct: 563 NVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYT 622

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
            L + L +  R+D+A  L + M  +GI P   TY  +I+  C  G   + ++L ++M+ R
Sbjct: 623 TLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMIAR 682

Query: 693 E 693
           +
Sbjct: 683 Q 683



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 140/463 (30%), Positives = 217/463 (46%), Gaps = 1/463 (0%)

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           + Y TMLD   K    Q A  +L  M  RG   +   ++ ++  +SR G L  A  ++  
Sbjct: 198 IVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRILTL 257

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M K G++      N  I    +   L +AL   E M   G+ P + +YN LI G C   R
Sbjct: 258 MQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVHR 317

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL-RSRNLVPTVVTYN 422
           + DA     EM  K   PD +SY T++   C+   + E   L + + ++ NL+P  VTYN
Sbjct: 318 IDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYN 377

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           TLI  L ++G  + A         +G   D + Y+ +V+  CK  N+  A+    +M  K
Sbjct: 378 TLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSK 437

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G  PD   YT  I G  ++G   EA ++ ++M   G  P+ +TY VL++GLC  G   EA
Sbjct: 438 GCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEA 497

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            E++       + P+ ITY++++H     G L    DL   M+ KG  P  V   +LI +
Sbjct: 498 REMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQS 557

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
                 +  A  Y  E   KG   NV+ + ++I G C++  +D A  +  DM      P+
Sbjct: 558 LCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPD 617

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             TYT L +         EA  L  +ML + I+P   T+ A++
Sbjct: 618 AITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVI 660



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/431 (29%), Positives = 213/431 (49%), Gaps = 3/431 (0%)

Query: 277 NGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLE 336
           + + Y  ++   S+    + AR ++R M + G++ S  +++ ++  YS  G+L  AL + 
Sbjct: 196 DAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRIL 255

Query: 337 EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR-KNVIPDIISYNTLLYGYCR 395
             M   GV P L+  N  IY L K  ++  A  RF E ++   + PDI+SYN L+ GYC 
Sbjct: 256 TLMQKAGVEPDLSICNTAIYVLVKGNKLEKAL-RFLERMKVAGIEPDIVSYNCLIKGYCD 314

Query: 396 SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI-NQGILPDVI 454
              I +A  L  E+  +   P  V+Y T++  LC+   +E  ++L ENM+ N  ++PD +
Sbjct: 315 VHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQV 374

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
           TY  ++    K G+   A  F  E   KG   D+  Y+  +    K  +  +A  L  +M
Sbjct: 375 TYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDM 434

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
            +KG  PD++TY  ++ G C++G ++EA ++L++M   G  P+ +TYT +++     G  
Sbjct: 435 YSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKS 494

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
              R++ N       +P  +TY+ ++H     G+L  A     EM  KG  PN +  N L
Sbjct: 495 LEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLL 554

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           I  LCR + +  A     +   +G   N   +T +I   C  G+   AL + ++M     
Sbjct: 555 IQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNK 614

Query: 695 EPDYCTHSALL 705
            PD  T++ L 
Sbjct: 615 HPDAITYTTLF 625



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 124/413 (30%), Positives = 203/413 (49%), Gaps = 9/413 (2%)

Query: 185 KKSMVEQCLLVFNKMLRNG-LLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
           K   VE+   +   M++N  L+PD    N +I  L  +G +  A    R   E G     
Sbjct: 349 KDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDK 408

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           V Y+ ++DSFCK   + +A  L+ +M  +GC+P+ VTY  +I GF R G++++A+ +++ 
Sbjct: 409 VGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQ 468

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEA---LNLEEEMVTRGVAPTLATYNILIYGLCK 360
           M K G K +  +Y  ++ G    G  +EA   +N+ EE       P   TY+ +++GL +
Sbjct: 469 MYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEE---HWWTPNAITYSAVMHGLRR 525

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G++S+A     EM+ K  +P+ +  N L+   CR+ N+  A    +E   +     VV 
Sbjct: 526 EGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVN 585

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           + ++I G C+ GDL+ A  + E+M      PD ITYT + +   K   L  A E   +ML
Sbjct: 586 FTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKML 645

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            KG+ P    Y   I    + G   +  +L E+M+A+   P    YN ++  LC  G+ E
Sbjct: 646 GKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMIAR--QPFKTVYNQVIEKLCYFGNRE 703

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
           EA +LL K++      D  T   +I + L  G+      +   M R+ L P L
Sbjct: 704 EAEKLLGKVLRTASKLDAKTCHILIESYLIDGNALSAYKVACQMFRRNLIPDL 756



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 182/408 (44%), Gaps = 35/408 (8%)

Query: 181 LIY--TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LIY  +K    +  L+   +    G   D    + ++     N    KA+ +   M   G
Sbjct: 379 LIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKG 438

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
             P +VTY  ++D FC+ G++ EA ++L +M   GC PN VTY VL+ G   NG+  +AR
Sbjct: 439 CNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAR 498

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            +I    +     +A +Y+ ++ G   +G L EA +L  EM+ +G  P     N+LI  L
Sbjct: 499 EMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSL 558

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C+   V  A+    E L K    +++++ +++YG+C+ G++  A  + +++   N  P  
Sbjct: 559 CRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDA 618

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK------------- 465
           +TY TL D L +   L+ A +L   M+ +GI P  +TY  +++  C+             
Sbjct: 619 ITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEK 678

Query: 466 --------------------MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
                                GN   A +   ++LR   + D       I   L  G+  
Sbjct: 679 MIARQPFKTVYNQVIEKLCYFGNREEAEKLLGKVLRTASKLDAKTCHILIESYLIDGNAL 738

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            AY++  +M  +   PDL     +   L   G   EA++L+ + V  G
Sbjct: 739 SAYKVACQMFRRNLIPDLKLCEKVTKKLVLDGMPAEADDLMLRFVERG 786



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 166/343 (48%), Gaps = 3/343 (0%)

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           P+  SY  ++  Y R+G +  A  +   ++   + P +   NT I  L +   LE A + 
Sbjct: 232 PEAFSY--VMVSYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRF 289

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
            E M   GI PD+++Y  ++ G C +  +  A E   EM  KG  PD+ +Y T +A   K
Sbjct: 290 LERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCK 349

Query: 501 LGDTSEAYRLQEEMLAKG-FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
                E  RL E M+      PD +TYN L++ L K G  ++A   LR+    GF  D +
Sbjct: 350 DRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKV 409

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
            Y++++ +  +  ++ + + L  +M  KG +P +VTYT +I      G+++ A     +M
Sbjct: 410 GYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQM 469

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
              G +PN +TY  L+NGLC   +  +A  +    EE    PN  TY+ +++     G  
Sbjct: 470 YKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKL 529

Query: 680 QEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLE 722
            EA  L +EM+++   P+    + L+         V A +YLE
Sbjct: 530 SEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLE 572



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 77/167 (46%), Gaps = 5/167 (2%)

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL--SPTLVTYTVLIHAHAARGRLELAFM 614
           D I Y +++    +    +  R +   M R+G+  SP   +Y ++ ++ A  G L  A  
Sbjct: 196 DAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRA--GMLRNALR 253

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
             + MQ  G+ P++   N  I  L +  ++++A      M+  GI P+  +Y  LI   C
Sbjct: 254 ILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYC 313

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYL 721
           +     +AL L  EM  +   PD  ++   ++  L KD KV  V+ L
Sbjct: 314 DVHRIDDALELIAEMPFKGCPPDKVSYYT-VMAFLCKDRKVEEVKRL 359


>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 882

 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 156/535 (29%), Positives = 272/535 (50%), Gaps = 1/535 (0%)

Query: 171 VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV 230
           V + +   L+    ++  V   L + +++  + L PD+   N  I      G    A + 
Sbjct: 212 VGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKF 271

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
           +  +   G+KP  V+Y +M+   CK G + EA EL  +M+     P    YN +I G+  
Sbjct: 272 FHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGS 331

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
            G  E A  L+  + + G   S  S+N I+    +K  + EAL+L E M  +   P  +T
Sbjct: 332 AGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM-KKDAEPNSST 390

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           YNI+I  LC  GRV +A     EM   ++ P++++ N ++   C++  + EA+ +F+   
Sbjct: 391 YNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESAS 450

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
            R   P  VTY +LIDGL + G ++ A +L E M++ G   + + YT ++      G   
Sbjct: 451 QRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKE 510

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
              + F E++R+G +PD     T +    K G+  +   + E++ + GF PD+ +Y++L+
Sbjct: 511 DGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILI 570

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
           HGL K G   E + +   M   GF  D   Y +++    + G + +  ++   M  K + 
Sbjct: 571 HGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQ 630

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           PT+ TY  ++   A   RL+ A+M F E + KGI  NV+ Y++LI+G  ++ RID+AY +
Sbjct: 631 PTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLI 690

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             +M ++G+ PN YT+  L++    A    EAL  ++ M + +  P+  T+S L+
Sbjct: 691 LEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILI 745



 Score =  239 bits (609), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 176/681 (25%), Positives = 317/681 (46%), Gaps = 56/681 (8%)

Query: 83  FQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRS 142
           F+   S   +L+  L   R +P  AL   R ++ + G +    +F T++  L   G +  
Sbjct: 175 FRPAFSAYTVLIGALAEAR-RPERALELLRQMQ-EVGYEVGVHLFTTLVRALAREGQVAD 232

Query: 143 AYWVVETVVCVNMHGILDVLIGGGLSSCVSIKIL--DLLLLIYTKKSMVEQCLLVFNKML 200
           A  +V+ V                  SC+   I+  ++ +  + K   V+     F+++ 
Sbjct: 233 ALALVDEVK----------------GSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELK 276

Query: 201 RNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQ 260
             GL PD  +   +I VL   G   +A E++  M      P    YNTM+  +   G  +
Sbjct: 277 AQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFE 336

Query: 261 EALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII 320
           +A +LL  ++ RGC P+ V++N ++T   +  ++++A  L  +++K   + ++ +YN II
Sbjct: 337 DAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNIII 395

Query: 321 CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
                 G + EA  + +EM    + P L T NI++  LCK  ++ +A   F    ++   
Sbjct: 396 DMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCN 455

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFD--------------------------------- 407
           PD ++Y +L+ G  + G + EA+ LF+                                 
Sbjct: 456 PDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKI 515

Query: 408 --ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
             EL  R   P +   NT +D + + G++E  + + E++ + G LPDV +Y+I+++G  K
Sbjct: 516 FKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTK 575

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
            G        F+ M ++G   D  AY   + G  K G   +AY + EEM  K   P + T
Sbjct: 576 AGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVAT 635

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           Y  +V GL K+  L+EA  L  +    G   + + Y+S+I    ++G +     +   M+
Sbjct: 636 YGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMM 695

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
           +KGL+P + T+  L+ A      +  A + F  M+     PN  TY+ LINGLCR+++ +
Sbjct: 696 KKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYN 755

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +A+  + DM+++G++PN  TYT +I+     GN  +A  L++        PD  + +AL+
Sbjct: 756 KAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALI 815

Query: 706 LKQLDKDYKVHAVEYLESLTL 726
               + +  + A +  E   L
Sbjct: 816 EGMSNANRAMEAYQVFEETRL 836



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 146/561 (26%), Positives = 251/561 (44%), Gaps = 75/561 (13%)

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
           +M     +P+   Y  ++ +  +    + ALELL +MQ  G       +  L+   +R G
Sbjct: 169 VMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREG 228

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
           ++  A  L+ ++    L+     YN  I  + + G +  A     E+  +G+ P   +Y 
Sbjct: 229 QVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYT 288

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
            +I+ LCK GR+ +A   F +M  +  +P   +YNT++ GY  +G   +A+ L + LR R
Sbjct: 289 SMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRER 348

Query: 413 NLVPTVVT----------------------------------YNTLIDGLCRYGDLEVAQ 438
             +P+VV+                                  YN +ID LC  G +E A 
Sbjct: 349 GCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAY 408

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
           ++ + M +  + P+++T  IMV+  CK   L  A + F    ++G  PD   Y + I G 
Sbjct: 409 RILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGL 468

Query: 499 LKLGDTSEAYRLQEEML-----------------------------------AKGFPPDL 523
            K G   EAYRL E+ML                                    +G  PDL
Sbjct: 469 GKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDL 528

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
              N  +  + K G +E+   +   +   GF+PD  +Y+ +IH   + G  R   ++F+ 
Sbjct: 529 TLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHA 588

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           M ++G +     Y  ++      G++  A+    EM+ K ++P V TY A+++GL ++ R
Sbjct: 589 MKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDR 648

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSA 703
           +D+AY LF + + +GI  N   Y+ LI+     G   EA  + +EM+ + + P+  T ++
Sbjct: 649 LDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNS 708

Query: 704 LLLKQLDKDYKVHAVEYLESL 724
           LL      D  V A E  E+L
Sbjct: 709 LL------DALVKAEEINEAL 723



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 111/427 (25%), Positives = 209/427 (48%), Gaps = 14/427 (3%)

Query: 116 TQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKI 175
           +Q G   D   +C++++ L + G +  AY + E            +L  G  ++ V    
Sbjct: 450 SQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEK-----------MLDAGHNANPVVYTS 498

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
           L     I+ +K   E    +F +++R G  PD+   N  +  +   G   K R ++  + 
Sbjct: 499 LIRNFFIHGRK---EDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIR 555

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
            +G  P + +Y+ ++    K G+ +E   +   M+ +G + +   YN ++ GF ++G++ 
Sbjct: 556 SYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVH 615

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
           +A  ++ +M +  ++ +  +Y  I+ G ++   L EA  L EE  ++G+   +  Y+ LI
Sbjct: 616 KAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLI 675

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
            G  K GR+ +A     EM++K + P++ ++N+LL    ++  I EA + F  ++     
Sbjct: 676 DGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCP 735

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P   TY+ LI+GLCR      A    ++M  QG++P+V+TYT M++G  K+GN++ A   
Sbjct: 736 PNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSL 795

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
           F      G  PD  ++   I G        EAY++ EE   +G   ++ +   L+  L K
Sbjct: 796 FERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDALNK 855

Query: 536 LGSLEEA 542
              LE+A
Sbjct: 856 SECLEQA 862



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 185/397 (46%), Gaps = 11/397 (2%)

Query: 329 LVEALNLEEEMVTRGVA------PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
           LV A  L++ ++   V       P  + Y +LI  L +  R   A     +M        
Sbjct: 154 LVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVG 213

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
           +  + TL+    R G + +A  L DE++   L P +V YN  ID   + G++++A +   
Sbjct: 214 VHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFH 273

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            +  QG+ PD ++YT M+   CK G L  A E F +M  +   P  +AY T I G    G
Sbjct: 274 ELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAG 333

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
              +AY+L E +  +G  P ++++N ++  L K   ++EA  L   M  D   P+  TY 
Sbjct: 334 RFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAE-PNSSTYN 392

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
            II      G +     + + M    L P L+T  +++       +LE A+  F     +
Sbjct: 393 IIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQR 452

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
           G  P+ +TY +LI+GL +  ++D+AY LF  M + G   N   YT LI      G  ++ 
Sbjct: 453 GCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDG 512

Query: 683 LRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVE 719
            +++KE++ R  +PD      LL   +D  +K   VE
Sbjct: 513 HKIFKELIRRGCKPDL----TLLNTYMDCVFKAGEVE 545



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 124/477 (25%), Positives = 208/477 (43%), Gaps = 38/477 (7%)

Query: 284 LITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG 343
           L     R   L+ A   +  M +L  + +  +Y  +I   +E      AL L  +M   G
Sbjct: 150 LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVG 209

Query: 344 VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYN---------------- 387
               +  +  L+  L + G+V+DA     E+    + PDI+ YN                
Sbjct: 210 YEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAW 269

Query: 388 -------------------TLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
                              ++++  C++G +GEA  LF ++ +   VP    YNT+I G 
Sbjct: 270 KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 329

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
              G  E A +L E +  +G +P V+++  ++    K   +  A   F E+++K  +P+ 
Sbjct: 330 GSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNS 388

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             Y   I      G   EAYR+ +EM      P+L+T N++V  LCK   LEEA ++   
Sbjct: 389 STYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFES 448

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
               G  PD +TY S+I    + G +     LF  ML  G +   V YT LI      GR
Sbjct: 449 ASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGR 508

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
            E     F E+  +G +P++   N  ++ + +   +++   +F D+   G LP+  +Y+I
Sbjct: 509 KEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSI 568

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVH-AVEYLESL 724
           LI+    AG  +E   ++  M  +    D   ++A ++    K  KVH A E LE +
Sbjct: 569 LIHGLTKAGQARETSNIFHAMKQQGFALDARAYNA-VVDGFCKSGKVHKAYEILEEM 624



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 169/356 (47%), Gaps = 3/356 (0%)

Query: 337 EEMVTRGVA-PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
           EEM   G   P  A  + L   L +  R+ DA      M R    P   +Y  L+     
Sbjct: 133 EEMAVLGYGLPNQACAH-LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAE 191

Query: 396 SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
           +     A  L  +++       V  + TL+  L R G +  A  L + +    + PD++ 
Sbjct: 192 ARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVL 251

Query: 456 YTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML 515
           Y + ++   K GN+ MA +FF+E+  +GL+PD  +YT+ I    K G   EA  L  +M 
Sbjct: 252 YNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQME 311

Query: 516 AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLR 575
           A+   P    YN ++ G    G  E+A +LL ++   G IP  +++ SI+    +   + 
Sbjct: 312 AERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVD 371

Query: 576 RGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALI 635
               LF  M +K   P   TY ++I      GR+E A+    EM+   + PN++T N ++
Sbjct: 372 EALSLFEVM-KKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMV 430

Query: 636 NGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           + LC+ R++++AY +F    + G  P+  TY  LI+     G   EA RL+++MLD
Sbjct: 431 DRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLD 486



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 5/195 (2%)

Query: 221 NGFSVKAR--EVYRMMGEF---GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCS 275
           +GF    R  E Y ++ E    G+ P++ T+N++LD+  K  E+ EAL     M+   C 
Sbjct: 676 DGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCP 735

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           PN  TY++LI G  R  +  +A    +DM K GL  +  +Y  +I G ++ G + +A +L
Sbjct: 736 PNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSL 795

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
            E     G  P  A++N LI G+    R  +A   F E   +    +I S  +LL    +
Sbjct: 796 FERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDALNK 855

Query: 396 SGNIGEAFLLFDELR 410
           S  + +A ++   LR
Sbjct: 856 SECLEQAAIVGAVLR 870


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 189/692 (27%), Positives = 325/692 (46%), Gaps = 63/692 (9%)

Query: 75  NNRWVSDHFQAV-----VSDPELLVRVLNRIREKPRIALRFFRWVETQ------PGV--- 120
           N  W  D  +A+     +S PE++V V+ R+++   +A ++FRWVE +      P V   
Sbjct: 80  NGLWGPDVEEALNVFDEMSQPEVIVGVMKRLKD-VNVAFQYFRWVERKTQQAHCPEVYNA 138

Query: 121 -------KRDEFVFCTILEILIESGLLRSAYWVVETVVC-VNMH------GILDVL---- 162
                   R+      ILE +  +G   S +  VE V   V  H      G+++++    
Sbjct: 139 FLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMRKFK 198

Query: 163 ----------IGGGLSSC-------------------VSIKILDLLLLIYTKKSMVEQCL 193
                     + G LS+                     ++ +   L+ ++ ++  ++  L
Sbjct: 199 FRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAAL 258

Query: 194 LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
            + ++M  N    D+   N  I      G    A + +  M   G+ P  VTY T++   
Sbjct: 259 SLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVL 318

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           CK   + EA+EL  E+      P    YN +I G+   G+ ++A  L+    + G   S 
Sbjct: 319 CKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSV 378

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
            +YN I+     KG + EAL + +EM  +  AP L TYNILI  LCK G +  A      
Sbjct: 379 IAYNCILTCLGRKGKVEEALRIHDEM-RQDAAPNLTTYNILIDMLCKAGELEAALKVQDT 437

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M    + P+I++ N ++   C++  + EA  +F  L  +   P   T+ +LIDGL R G 
Sbjct: 438 MKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGR 497

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           ++ A  L E M++   +P+V+ YT ++    K G      + + EM+ +G  PD     +
Sbjct: 498 VDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNS 557

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            +    K G+  +   L EE+ A+G  PD+ +Y++L+HGL K G   E  +L  +M   G
Sbjct: 558 YMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQG 617

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
              D + Y ++I    + G + +   L   M  KGL PT+VTY  ++   A   RL+ A+
Sbjct: 618 LHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAY 677

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
           M F E +  G+  NV+ Y++LI+G  ++ RID+AY +  ++ ++G+ PN YT+  L++  
Sbjct: 678 MLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDAL 737

Query: 674 CNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             A    EA   ++ M + +  P+  T+S ++
Sbjct: 738 VKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMI 769



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 158/558 (28%), Positives = 272/558 (48%), Gaps = 36/558 (6%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K   V+     F++M   GL+PD      +I VL       +A E++  +      P 
Sbjct: 283 FGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPC 342

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +  YNTM+  +   G+  EA  LL   + +GC P+ + YN ++T   R G++E+A   I 
Sbjct: 343 VYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEAL-RIH 401

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW- 361
           D ++     +  +YN +I    + G L  AL +++ M   G+ P + T NI+I  LCK  
Sbjct: 402 DEMRQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQ 461

Query: 362 ----------------------------------GRVSDARHRFFEMLRKNVIPDIISYN 387
                                             GRV DA   + +ML  + IP+++ Y 
Sbjct: 462 KLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYT 521

Query: 388 TLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
           +L+  + + G   +   ++ E+  R   P ++  N+ +D + + G++E  + L E +  Q
Sbjct: 522 SLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQ 581

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
           G++PDV +Y+I+++G  K G      + F EM  +GL  D  AY T I G  K G   +A
Sbjct: 582 GLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKA 641

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
           Y+L EEM  KG  P ++TY  +V GL K+  L+EA  L  +    G   + + Y+S+I  
Sbjct: 642 YQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDG 701

Query: 568 SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
             ++G +     +   +++KGL+P   T+  L+ A      ++ A + F  M+     PN
Sbjct: 702 FGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPN 761

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYK 687
            +TY+ +INGLC +R+ ++A+  + +M+++G+ PN  TYT +I     AGN  EA  L+ 
Sbjct: 762 AMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFD 821

Query: 688 EMLDREIEPDYCTHSALL 705
                   PD   ++A++
Sbjct: 822 RFKASGGVPDSACYNAMI 839



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 156/588 (26%), Positives = 288/588 (48%), Gaps = 20/588 (3%)

Query: 103 KPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVL 162
           K  +A +FF  ++ Q G+  D+  + T++ +L ++  L  A  + E          LD+ 
Sbjct: 288 KVDMAWKFFHEMKAQ-GLVPDDVTYTTLIGVLCKARRLDEAVELFEE---------LDLN 337

Query: 163 IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG 222
                 S   +   + +++ Y      ++   +  +  R G +P V   N I+  L   G
Sbjct: 338 -----RSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKG 392

Query: 223 FSVKAREVYRMMGEF--GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVT 280
              K  E  R+  E      P++ TYN ++D  CK GE++ AL++   M+  G  PN +T
Sbjct: 393 ---KVEEALRIHDEMRQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMT 449

Query: 281 YNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV 340
            N++I    +  +L++A  +   +        + ++  +I G   +G + +A +L E+M+
Sbjct: 450 VNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKML 509

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
                P +  Y  LI    K GR  D    + EM+ +   PD++  N+ +    ++G + 
Sbjct: 510 DSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVE 569

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           +   LF+E++++ LVP V +Y+ LI GL + G      +L   M  QG+  DV+ Y  ++
Sbjct: 570 KGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVI 629

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
           +G CK G +  A +   EM  KGLQP    Y + + G  K+    EAY L EE  + G  
Sbjct: 630 DGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVD 689

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
            +++ Y+ L+ G  K+G ++EA  +L +++  G  P+  T+  ++ A ++  ++   +  
Sbjct: 690 LNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVC 749

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
           F NM     SP  +TY+++I+      +   AF+++ EMQ +G++PN ITY  +I GL +
Sbjct: 750 FQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAK 809

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
              + +A GLF   +  G +P+   Y  +I    +A    +A  +++E
Sbjct: 810 AGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEE 857


>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  261 bits (668), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 156/477 (32%), Positives = 243/477 (50%), Gaps = 1/477 (0%)

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           M+ +F + G+++EA+ ++ EMQ +G  P+  T N ++      G +E A  +  +M + G
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           +     S+  ++      G ++EA      MV RG     AT  ++I   C+ G V+   
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F++M+   + P++I++  L+ G C+ G+I +AF L +E+  R   P V T+ TLIDGL
Sbjct: 280 GYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGL 339

Query: 429 CRYGDLEVAQQLKENMI-NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           C+ G  E A +L   ++ + G  P+V TYT M+NG CK   L+ A    + M  +GL P+
Sbjct: 340 CKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPN 399

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              YTT I G  K+G+   AY L + M  +GF P++ TYN ++ GLCK GSL+EA  LL 
Sbjct: 400 TNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLN 459

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
           K+   G   D +TYT ++       D  R    FN ML+ G +P + +YT LI     + 
Sbjct: 460 KVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQK 519

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
           +++ +   F E    G+ P   TY ++I G CR      A  LF  M   G  P+  TY 
Sbjct: 520 QMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYG 579

Query: 668 ILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
            LI+  C      +A  LY  M+D+ + P   T   L  +   KD    A+  L+ L
Sbjct: 580 ALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRL 636



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 148/472 (31%), Positives = 233/472 (49%), Gaps = 4/472 (0%)

Query: 226 KAREVYRMMGEF---GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYN 282
           K +E   M+ E    G+ PS  T N +LD     G ++ A  +  EM  RG SP+ V++ 
Sbjct: 169 KLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFK 228

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
           +++      G + +A   +  M++ G  V   +   II  + +KG +   +    +MV  
Sbjct: 229 LMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEM 288

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           G+AP +  +  LI GLCK G +  A     EM+R+   P++ ++ TL+ G C+ G   +A
Sbjct: 289 GLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKA 348

Query: 403 FLLFDEL-RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           F LF +L RS    P V TY  +I+G C+   L  A+ L   M  QG++P+  TYT +++
Sbjct: 349 FRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLID 408

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
           G CK+GN   A E  + M ++G  P+ + Y   I G  K G   EAYRL  ++   G   
Sbjct: 409 GHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQA 468

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           D +TY +L+   C+      +     KM+  GF PD  +YT++I        ++    LF
Sbjct: 469 DGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLF 528

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
              +  GL PT  TYT +I  +   G   LA   F  M   G  P+ ITY ALI+GLC+ 
Sbjct: 529 EEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKE 588

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
            ++D A  L+  M ++G+ P + T   L  E C   +   A+ +   +  R+
Sbjct: 589 SKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQ 640



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 142/521 (27%), Positives = 251/521 (48%), Gaps = 4/521 (0%)

Query: 174 KILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRM 233
           +++  +++ + +   +++ + +  +M   GL+P  +  N ++ V    G    A  ++  
Sbjct: 155 EVMQCMVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVE 214

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M + G+ P  V++  M+ + C  G + EA   L  M  RG   +  T  ++I  F + G 
Sbjct: 215 MCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGY 274

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           + +  G    M+++GL  +  ++  +I G  ++G + +A  L EEMV RG  P + T+  
Sbjct: 275 VNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTT 334

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKN-VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
           LI GLCK G    A   F +++R +   P++ +Y  ++ GYC+   +  A +L   ++ +
Sbjct: 335 LIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQ 394

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
            LVP   TY TLIDG C+ G+   A +L + M  +G  P++ TY  +++G CK G+L  A
Sbjct: 395 GLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEA 454

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
               N++   GLQ D   YT  ++   +  DT+ +     +ML  GF PD+ +Y  L+  
Sbjct: 455 YRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLIST 514

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
            C+   ++E+  L  + V  G IP   TYTS+I      G+      LF  M   G +P 
Sbjct: 515 FCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPD 574

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
            +TY  LI       +L+ A   +  M  KG+ P  +T   L    C+      A  +  
Sbjct: 575 SITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLD 634

Query: 653 DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
            +E+   +    T   L+ + C+ G    A   + ++LD+E
Sbjct: 635 RLEKRQWI---RTVNTLVRKLCSEGKLDMAALFFHKLLDKE 672



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 142/502 (28%), Positives = 252/502 (50%), Gaps = 4/502 (0%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           S + L+ +L +     +VE    +F +M + G+ PD  +   ++    + G  ++A    
Sbjct: 188 STQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWL 247

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M E G      T   ++D+FC++G +   +   W+M   G +PN + +  LI G  + 
Sbjct: 248 NAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQ 307

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV-TRGVAPTLAT 350
           G ++QA  L+ +M++ G K + +++  +I G  +KG   +A  L  ++V + G  P + T
Sbjct: 308 GSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHT 367

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           Y  +I G CK  +++ A      M  + ++P+  +Y TL+ G+C+ GN   A+ L D + 
Sbjct: 368 YTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMG 427

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
                P + TYN +IDGLC+ G L+ A +L   +   G+  D +TYTI+++  C+  + +
Sbjct: 428 KEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTN 487

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            +  FFN+ML+ G  PD  +YTT I+   +     E+ RL EE ++ G  P   TY  ++
Sbjct: 488 RSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMI 547

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
            G C+ G+   A +L ++M   G  PD ITY ++I    +   L   R+L++ M+ KGLS
Sbjct: 548 CGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLS 607

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           P  VT   L + +  +     A      ++    R  + T N L+  LC   ++D A   
Sbjct: 608 PCEVTRLTLAYEYCKKDDSSTAINVLDRLEK---RQWIRTVNTLVRKLCSEGKLDMAALF 664

Query: 651 FIDMEEEGILPNKYTYTILINE 672
           F  + ++    N+ T    +N+
Sbjct: 665 FHKLLDKEPNVNRVTLLGFMNK 686


>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score =  261 bits (668), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 180/620 (29%), Positives = 289/620 (46%), Gaps = 75/620 (12%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  Y K   VE+   ++ KM+ NG++PDV  C+ I+     +G   +A  ++R M E G
Sbjct: 327 LIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMG 386

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCS----------------------- 275
           + P+ V+Y T+++S  K G + EA  L  +M  RG S                       
Sbjct: 387 LDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAE 446

Query: 276 ------------PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGY 323
                       PN VTY+ L+ G+ + G++E A  +++ M K  +  +  +++ II GY
Sbjct: 447 EVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGY 506

Query: 324 SEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG------------LCK----------- 360
           ++KG+L +A+++  EMV R V P    Y ILI G             CK           
Sbjct: 507 AKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESN 566

Query: 361 ------------WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDE 408
                        GR+ +AR    +M  K + PDI++Y +L+ GY + GN   A  +  E
Sbjct: 567 VIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQE 626

Query: 409 LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
           ++ +N+   VV YN LI GL R G  +  + +   MI  G+ PD ITY  ++N  C  G 
Sbjct: 627 MKEKNIRFDVVAYNALIKGLLRLGKYD-PRYVCSRMIELGLAPDCITYNTIINTYCIKGK 685

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
              A +  NEM   G+ P+   Y   I G  K G   +A    +EML   F P  IT+  
Sbjct: 686 TEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKF 745

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           LV    +    ++  ++  K+V  G       Y ++I     +G  R+ + + + M+++G
Sbjct: 746 LVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRG 805

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR----LRRI 644
           +S  LVTY  LI  +     +E A   +S+M V GI PN+ TYN L+ GL         +
Sbjct: 806 ISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMM 865

Query: 645 DQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
           ++   L  +M E G++PN  TY IL++     GN ++ + L+ EM+ +   P   T++ L
Sbjct: 866 EETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVL 925

Query: 705 LLKQLDKDYKVHAVEYLESL 724
           +         + A E L  L
Sbjct: 926 ISDYAKSGKMIEARELLNDL 945



 Score =  261 bits (667), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 168/564 (29%), Positives = 278/564 (49%), Gaps = 56/564 (9%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
           F+ M   GL+P +   N ++     +G   + + +Y  M   G+ P + + N ++ S CK
Sbjct: 82  FSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCK 141

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
            G++  AL  L          + VTYN +I GF + G ++Q  GL+ +M+K GL   + +
Sbjct: 142 VGDLDLALGYL--RNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSIT 199

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
            N ++ GY   GL+  A  +   +V  GV   +   N LI G C+ G +S A        
Sbjct: 200 CNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSW 259

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS-------------------RNLVP 416
           R +V  DI++YNTLL  +C++G++  A  LF+E+                     +NL P
Sbjct: 260 RSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQP 319

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
           T+VTY TLI   C++  +E +  L + MI  GI+PDV+T + ++ G C+ G L+ A   F
Sbjct: 320 TLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLF 379

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG------------------ 518
            EM   GL P+  +Y T I    K G   EA+ LQ +M+ +G                  
Sbjct: 380 REMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKV 439

Query: 519 -----------------FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
                              P+ +TY+ L+ G CKLG +E A  +L+KM  +   P+ IT+
Sbjct: 440 GKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITF 499

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
           +SII+   + G L +  D+   M+++ + P  + Y +LI  +   G  ++A  +  EM+ 
Sbjct: 500 SSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKS 559

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
           + +  + + ++ L+N L R+ R+D+A  L IDM  +GI P+   Y  LI+     GN   
Sbjct: 560 RRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLA 619

Query: 682 ALRLYKEMLDREIEPDYCTHSALL 705
           AL + +EM ++ I  D   ++AL+
Sbjct: 620 ALSIVQEMKEKNIRFDVVAYNALI 643



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 166/584 (28%), Positives = 281/584 (48%), Gaps = 27/584 (4%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G+  D     T+++ L + G  + A  V ET++ +N+             +CV+      
Sbjct: 421 GISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLA-----------PNCVT---YSA 466

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL  Y K   +E   LV  KM +  + P+V   + II      G   KA +V R M +  
Sbjct: 467 LLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRN 526

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           + P+ + Y  ++D + K GE   A +   EM+ R    + V +++L+    R G +++AR
Sbjct: 527 VMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEAR 586

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            LI DM   G+     +Y  +I GY ++G  + AL++ +EM  + +   +  YN LI GL
Sbjct: 587 SLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGL 646

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
            + G+  D R+    M+   + PD I+YNT++  YC  G   +A  + +E++S  ++P  
Sbjct: 647 LRLGKY-DPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNA 705

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           VTYN LI GLC+ G +E A+   + M+    +P  IT+  +V    +        +   +
Sbjct: 706 VTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEK 765

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           ++  GL+     Y T I    +LG T +A  + +EM+ +G   DL+TYN L+ G C    
Sbjct: 766 LVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSH 825

Query: 539 LEEANELLRKMVGDGFIPDHITYTSII----HASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           +E+A +   +M  DG  P+  TY +++    +A L    +     L + M  +GL P   
Sbjct: 826 VEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAA 885

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           TY +L+  +   G  +   +   EM  KG  P + TYN LI+   +  ++ +A  L  D+
Sbjct: 886 TYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDL 945

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
             +G +PN +TY IL    C   N       Y+  +DR ++  Y
Sbjct: 946 LTKGRIPNSFTYDIL---TCGWLNLS-----YEPEIDRSLKRSY 981



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 164/584 (28%), Positives = 279/584 (47%), Gaps = 27/584 (4%)

Query: 157 GILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK 216
           G+L  ++  GL  C      ++L+  Y +  +V+    V   ++  G+  DV   N +I 
Sbjct: 183 GLLSEMVKRGL--CFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLID 240

Query: 217 VLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG----- 271
              + G   +A E+        +K  IVTYNT+L +FCK G++  A  L  E+ G     
Sbjct: 241 GYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDE 300

Query: 272 --------------RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
                         +   P  VTY  LI  + +   +E++  L + M+  G+     + +
Sbjct: 301 DRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCS 360

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            I+ G+   G L EA  L  EM   G+ P   +Y  +I  L K GRV +A +   +M+ +
Sbjct: 361 SILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVR 420

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
            +  DI++  T++ G  + G   EA  +F+ +   NL P  VTY+ L+DG C+ G +E+A
Sbjct: 421 GISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELA 480

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
           + + + M  + + P+VIT++ ++NG  K G LS A +   EM+++ + P+   Y   I G
Sbjct: 481 ELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDG 540

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
             K G+   A    +EM ++      + +++L++ L ++G ++EA  L+  M   G  PD
Sbjct: 541 YFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPD 600

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
            + Y S+I    + G+      +   M  K +   +V Y  LI      G+ +  ++  S
Sbjct: 601 IVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYV-CS 659

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
            M   G+ P+ ITYN +IN  C   + + A  +  +M+  GI+PN  TY ILI   C  G
Sbjct: 660 RMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTG 719

Query: 678 NWQEALRLYKEMLDREIEPDYCTHSALL-----LKQLDKDYKVH 716
             ++A     EML  E  P   TH  L+      ++ DK  ++H
Sbjct: 720 AVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIH 763



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 152/587 (25%), Positives = 296/587 (50%), Gaps = 34/587 (5%)

Query: 138 GLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFN 197
           GL++ A WV        M+ ++D    GG++    +  L+ L+  Y +  ++ Q   +  
Sbjct: 211 GLVQYAEWV--------MYNLVD----GGVTK--DVIGLNTLIDGYCEAGLMSQATELIE 256

Query: 198 KMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF-------------------G 238
              R+ +  D+   N ++K     G   +A  ++  +  F                    
Sbjct: 257 NSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKN 316

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           ++P++VTY T++ ++CK   ++E+  L  +M   G  P+ VT + ++ GF R+G+L +A 
Sbjct: 317 LQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAA 376

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L R+M ++GL  +  SY  II    + G ++EA NL+ +MV RG++  + T   ++ GL
Sbjct: 377 VLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGL 436

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
            K G+  +A   F  +L+ N+ P+ ++Y+ LL GYC+ G +  A L+  ++   ++ P V
Sbjct: 437 FKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNV 496

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           +T++++I+G  + G L  A  +   M+ + ++P+ I Y I+++G  K G   +A +F  E
Sbjct: 497 ITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKE 556

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M  + L+     +   +    ++G   EA  L  +M +KG  PD++ Y  L+ G  K G+
Sbjct: 557 MKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGN 616

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
              A  ++++M       D + Y ++I   L +G     R + + M+  GL+P  +TY  
Sbjct: 617 QLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDP-RYVCSRMIELGLAPDCITYNT 675

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           +I+ +  +G+ E A    +EM+  GI PN +TYN LI GLC+   +++A     +M    
Sbjct: 676 IINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVME 735

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            +P   T+  L+     +    + L+++++++   +E     ++ L+
Sbjct: 736 FVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLI 782



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 131/478 (27%), Positives = 225/478 (47%), Gaps = 60/478 (12%)

Query: 284 LITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG 343
           LI  +  +     A      M  LGL  +   +N ++  ++  GL+ +   +  +M+  G
Sbjct: 65  LIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCG 124

Query: 344 VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI--ISYNTLLYGYCRSGNIGE 401
           V P + + N+L++ LCK G +  A       LR N + DI  ++YNT+++G+C+ G + +
Sbjct: 125 VVPDVFSVNVLVHSLCKVGDLDLA----LGYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQ 180

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
            F L  E+  R L    +T N L+ G CR G ++ A+ +  N+++ G+  DVI    +++
Sbjct: 181 GFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLID 240

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA----- 516
           G C+ G +S A E      R  ++ D   Y T +    K GD + A  L  E+L      
Sbjct: 241 GYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDE 300

Query: 517 --------------KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
                         K   P L+TY  L+   CK   +EE++ L +KM+ +G +PD +T +
Sbjct: 301 DRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCS 360

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
           SI++     G L     LF  M   GL P  V+Y  +I++    GR+  AF   S+M V+
Sbjct: 361 SILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVR 420

Query: 623 GIR-----------------------------------PNVITYNALINGLCRLRRIDQA 647
           GI                                    PN +TY+AL++G C+L +++ A
Sbjct: 421 GISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELA 480

Query: 648 YGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             +   ME+E + PN  T++ +IN     G   +A+ + +EM+ R + P+   ++ L+
Sbjct: 481 ELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILI 538



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 168/374 (44%), Gaps = 56/374 (14%)

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           + TL+  Y        A   F  +R+  LVPT+  +NTL+      G +   + +  +M+
Sbjct: 62  FCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDML 121

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
             G++PDV +  ++V+  CK+G+L +A  +        +  D   Y T I G  + G   
Sbjct: 122 FCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRN--NDVVDIDNVTYNTVIWGFCQKGLVD 179

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI------ 559
           + + L  EM+ +G   D IT N+LV G C++G ++ A  ++  +V  G   D I      
Sbjct: 180 QGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLI 239

Query: 560 -----------------------------TYTSIIHASLEMGDLRRGRDLFNNMLR---- 586
                                        TY +++ A  + GDL R   LFN +L     
Sbjct: 240 DGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKD 299

Query: 587 ---------------KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
                          K L PTLVTYT LI A+     +E +   + +M + GI P+V+T 
Sbjct: 300 EDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTC 359

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           ++++ G CR  ++ +A  LF +M E G+ PN  +Y  +IN    +G   EA  L  +M+ 
Sbjct: 360 SSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVV 419

Query: 692 REIEPDYCTHSALL 705
           R I  D  T + ++
Sbjct: 420 RGISFDIVTCTTVM 433


>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
          Length = 716

 Score =  261 bits (668), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 156/535 (29%), Positives = 272/535 (50%), Gaps = 1/535 (0%)

Query: 171 VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV 230
           V + +   L+    ++  V   L + +++  + L PD+   N  I      G    A + 
Sbjct: 78  VGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKF 137

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
           +  +   G+KP  V+Y +M+   CK G + EA EL  +M+     P    YN +I G+  
Sbjct: 138 FHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGS 197

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
            G  E A  L+  + + G   S  S+N I+    +K  + EAL+L E M  +   P  +T
Sbjct: 198 AGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM-KKDAEPNSST 256

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           YNI+I  LC  GRV +A     EM   ++ P++++ N ++   C++  + EA+ +F+   
Sbjct: 257 YNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESAS 316

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
            R   P  VTY +LIDGL + G ++ A +L E M++ G   + + YT ++      G   
Sbjct: 317 QRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKE 376

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
              + F E++R+G +PD     T +    K G+  +   + E++ + GF PD+ +Y++L+
Sbjct: 377 DGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILI 436

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
           HGL K G   E + +   M   GF  D   Y +++    + G + +  ++   M  K + 
Sbjct: 437 HGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQ 496

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           PT+ TY  ++   A   RL+ A+M F E + KGI  NV+ Y++LI+G  ++ RID+AY +
Sbjct: 497 PTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLI 556

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             +M ++G+ PN YT+  L++    A    EAL  ++ M + +  P+  T+S L+
Sbjct: 557 LEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILI 611



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 173/660 (26%), Positives = 310/660 (46%), Gaps = 56/660 (8%)

Query: 83  FQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRS 142
           F+   S   +L+  L   R +P  AL   R ++ + G +    +F T++  L   G +  
Sbjct: 41  FRPAFSAYTVLIGALAEAR-RPERALELLRQMQ-EVGYEVGVHLFTTLVRALAREGQVAD 98

Query: 143 AYWVVETVVCVNMHGILDVLIGGGLSSCVSIKIL--DLLLLIYTKKSMVEQCLLVFNKML 200
           A  +V+ V                  SC+   I+  ++ +  + K   V+     F+++ 
Sbjct: 99  ALALVDEVK----------------GSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELK 142

Query: 201 RNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQ 260
             GL PD  +   +I VL   G   +A E++  M      P    YNTM+  +   G  +
Sbjct: 143 AQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFE 202

Query: 261 EALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII 320
           +A +LL  ++ RGC P+ V++N ++T   +  ++++A  L  +++K   + ++ +YN II
Sbjct: 203 DAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNIII 261

Query: 321 CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
                 G + EA  + +EM    + P L T NI++  LCK  ++ +A   F    ++   
Sbjct: 262 DMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCN 321

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFD--------------------------------- 407
           PD ++Y +L+ G  + G + EA+ LF+                                 
Sbjct: 322 PDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKV 381

Query: 408 --ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
             EL  R   P +   NT +D + + G++E  + + E++ + G LPDV +Y+I+++G  K
Sbjct: 382 FKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTK 441

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
            G        F+ M ++G   D  AY   + G  K G   +AY + EEM  K   P + T
Sbjct: 442 AGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVAT 501

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           Y  +V GL K+  L+EA  L  +    G   + + Y+S+I    ++G +     +   M+
Sbjct: 502 YGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMM 561

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
           +KGL+P + T+  L+ A      +  A + F  M+     PN  TY+ LINGLCR+++ +
Sbjct: 562 KKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYN 621

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +A+  + DM+++G++PN  TYT +I+     GN  +A  L++        PD  + +AL+
Sbjct: 622 KAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALI 681



 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 156/580 (26%), Positives = 273/580 (47%), Gaps = 22/580 (3%)

Query: 106 IALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSA---YWVVETVVCVNMHGILDVL 162
           +A +FF  ++ Q G+K D+  + +++ +L ++G L  A   +  +E    V      + +
Sbjct: 133 MACKFFHELKAQ-GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTM 191

Query: 163 IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG 222
           I G                 Y      E    +  ++   G +P V + N I+  L    
Sbjct: 192 IMG-----------------YGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKR 234

Query: 223 FSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYN 282
              +A  ++ +M +   +P+  TYN ++D  C  G ++EA  +L EM+     PN +T N
Sbjct: 235 KVDEALSLFEVMKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVN 293

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
           +++    +  +LE+A  +     + G      +Y  +I G  +KG + EA  L E+M+  
Sbjct: 294 IMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDA 353

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           G       Y  LI      GR  D    F E++R+   PD+   NT +    ++G + + 
Sbjct: 354 GHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKG 413

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
            ++F+++RS   +P V +Y+ LI GL + G       +   M  QG   D   Y  +V+G
Sbjct: 414 RMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDG 473

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            CK G +  A E   EM  K +QP    Y   + G  K+    EAY L EE  +KG   +
Sbjct: 474 FCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELN 533

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
           ++ Y+ L+ G  K+G ++EA  +L +M+  G  P+  T+ S++ A ++  ++      F 
Sbjct: 534 VVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQ 593

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
           +M      P   TY++LI+      +   AF+++ +MQ +G+ PNV+TY  +I+GL ++ 
Sbjct: 594 SMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVG 653

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
            I  AY LF   +  G +P+  ++  LI    NA    EA
Sbjct: 654 NITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEA 693



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 146/562 (25%), Positives = 251/562 (44%), Gaps = 75/562 (13%)

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
           +M     +P+   Y  ++ +  +    + ALELL +MQ  G       +  L+   +R G
Sbjct: 35  VMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREG 94

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
           ++  A  L+ ++    L+     YN  I  + + G +  A     E+  +G+ P   +Y 
Sbjct: 95  QVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYT 154

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
            +I+ LCK GR+ +A   F +M  +  +P   +YNT++ GY  +G   +A+ L + LR R
Sbjct: 155 SMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRER 214

Query: 413 NLVPTVVT----------------------------------YNTLIDGLCRYGDLEVAQ 438
             +P+VV+                                  YN +ID LC  G +E A 
Sbjct: 215 GCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAY 274

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
           ++ + M +  + P+++T  IMV+  CK   L  A + F    ++G  PD   Y + I G 
Sbjct: 275 RILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGL 334

Query: 499 LKLGDTSEAYRLQEEMLA-----------------------------------KGFPPDL 523
            K G   EAYRL E+ML                                    +G  PDL
Sbjct: 335 GKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDL 394

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
              N  +  + K G +E+   +   +   GF+PD  +Y+ +IH   + G  R   ++F+ 
Sbjct: 395 TLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHA 454

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           M ++G +     Y  ++      G++  A+    EM+ K ++P V TY A+++GL ++ R
Sbjct: 455 MKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDR 514

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSA 703
           +D+AY LF + + +GI  N   Y+ LI+     G   EA  + +EM+ + + P+  T ++
Sbjct: 515 LDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNS 574

Query: 704 LLLKQLDKDYKVHAVEYLESLT 725
           LL      D  V A E  E+L 
Sbjct: 575 LL------DALVKAEEINEALV 590



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/394 (26%), Positives = 193/394 (48%), Gaps = 14/394 (3%)

Query: 116 TQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKI 175
           +Q G   D   +C++++ L + G +  AY + E +           L  G  ++ V    
Sbjct: 316 SQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKM-----------LDAGHNANPVVYTS 364

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
           L     I+ +K   E    VF +++R G  PD+   N  +  +   G   K R ++  + 
Sbjct: 365 LIRNFFIHGRK---EDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIR 421

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
            +G  P + +Y+ ++    K G+ +E   +   M+ +G + +   YN ++ GF ++G++ 
Sbjct: 422 SYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVH 481

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
           +A  ++ +M +  ++ +  +Y  I+ G ++   L EA  L EE  ++G+   +  Y+ LI
Sbjct: 482 KAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLI 541

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
            G  K GR+ +A     EM++K + P++ ++N+LL    ++  I EA + F  ++     
Sbjct: 542 DGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCP 601

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P   TY+ LI+GLCR      A    ++M  QG++P+V+TYT M++G  K+GN++ A   
Sbjct: 602 PNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSL 661

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
           F      G  PD  ++   I G        EAY+
Sbjct: 662 FERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 695



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 126/485 (25%), Positives = 211/485 (43%), Gaps = 39/485 (8%)

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           PN    + L     R   L+ A   +  M +L  + +  +Y  +I   +E      AL L
Sbjct: 9   PNQACAD-LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALEL 67

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYN-------- 387
             +M   G    +  +  L+  L + G+V+DA     E+    + PDI+ YN        
Sbjct: 68  LRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGK 127

Query: 388 ---------------------------TLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
                                      ++++  C++G +GEA  LF ++ +   VP    
Sbjct: 128 AGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYA 187

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YNT+I G    G  E A +L E +  +G +P V+++  ++    K   +  A   F E++
Sbjct: 188 YNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVM 246

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           +K  +P+   Y   I      G   EAYR+ +EM      P+L+T N++V  LCK   LE
Sbjct: 247 KKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLE 306

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA ++       G  PD +TY S+I    + G +     LF  ML  G +   V YT LI
Sbjct: 307 EAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLI 366

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                 GR E     F E+  +G +P++   N  ++ + +   +++   +F D+   G L
Sbjct: 367 RNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFL 426

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVH-AVE 719
           P+  +Y+ILI+    AG  +E   ++  M  +    D   ++A ++    K  KVH A E
Sbjct: 427 PDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNA-VVDGFCKSGKVHKAYE 485

Query: 720 YLESL 724
            LE +
Sbjct: 486 ILEEM 490


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  261 bits (668), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 159/531 (29%), Positives = 269/531 (50%), Gaps = 4/531 (0%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKM--LRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
           +L  I   K+ +E+C  VF+++   RN  +P     + +  VL D G   +A + +  M 
Sbjct: 32  ILREIVLSKAELEECD-VFDELWSTRNVCVPGFGVFDALFSVLIDLGMLEEATQCFSKMK 90

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
            F + P   + N +L  F K G+         +M G G  P   TYN++I    + G++E
Sbjct: 91  RFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIE 150

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
            ARGL  +M   GL     +YN +I GY + G L + +   EEM +    P + TYN LI
Sbjct: 151 AARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLI 210

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
              CK G++      + EM +  + P+++SY+TL+  +C+   + +A   + ++R    V
Sbjct: 211 NCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHV 270

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P   TY +L+D  C+ G+L  A +L   M+  G+  +V+TYT +++G C    +  A + 
Sbjct: 271 PNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKL 330

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
           F +M+  G+ P+  +Y   I G +K  +   A  L  E+  +G  PDL+ Y   + GLC 
Sbjct: 331 FGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCG 390

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
           L  +E A  ++ +M  +G   + + YT+++ A  + G+   G  L   M       T+VT
Sbjct: 391 LEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVT 450

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVK-GIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           + VLI        +  A  YF  M    G++PN   Y A+I+GLC+  ++  A  LF  M
Sbjct: 451 FCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQM 510

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            +EG++P++  YT L++ N   GN  EAL L  +M +  ++ D   +++L+
Sbjct: 511 AQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLV 561



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 145/556 (26%), Positives = 262/556 (47%), Gaps = 36/556 (6%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           + D L  +     M+E+    F+KM R  + P  ++CN ++      G +   +  ++ M
Sbjct: 65  VFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDM 124

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
              G KP++ TYN M+D   KEG+++ A  L  EM+ RG  P+ VTYN +I G+ + G L
Sbjct: 125 IGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRL 184

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           +       +M  +  +    +YN +I  + + G L + L    EM   G+ P + +Y+ L
Sbjct: 185 DDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTL 244

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           +   CK   +  A   + +M R   +P+  +Y +L+   C+ GN+ +AF L +E+    +
Sbjct: 245 VDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGV 304

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
              VVTY  LIDGLC    ++ A++L   M+  G++P++ +Y  +++G  K  N+  A E
Sbjct: 305 EWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALE 364

Query: 475 FFNEMLRKGLQPD-----------------------------------RFAYTTQIAGEL 499
             NE+  +G+QPD                                      YTT +    
Sbjct: 365 LLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYF 424

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD-GFIPDH 558
           K G+ +E   L EEM        ++T+ VL+ GLCK   + +A +   +M  D G  P+ 
Sbjct: 425 KSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNA 484

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
             YT++I    +   ++    LF  M ++GL P    YT L+  +  +G +  A     +
Sbjct: 485 AVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDK 544

Query: 619 MQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGN 678
           M   G++ +++ Y +L+ G  +  ++ +A     +M  E ILP++     ++ ++   G 
Sbjct: 545 MAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPDEVLCIGVLKKHYELGC 604

Query: 679 WQEALRLYKEMLDREI 694
             EA+ L   ++  ++
Sbjct: 605 IDEAVGLQSYLMKHQL 620



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 98/200 (49%)

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           P    ++ L   L  LG LEEA +   KM      P   +   ++H   ++G     +  
Sbjct: 61  PGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 120

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
           F +M+  G  PT+ TY ++I      G +E A   F EM+ +G+ P+ +TYN++I+G  +
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGK 180

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
           + R+D     F +M+     P+  TY  LIN  C +G   + L  Y+EM    ++P+  +
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVS 240

Query: 701 HSALLLKQLDKDYKVHAVEY 720
           +S L+     +D    A+++
Sbjct: 241 YSTLVDAFCKEDMMQQAIKF 260



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 1/230 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +E   +V N+M  NG+  +      ++     +G   +   +   M E   + ++VT+  
Sbjct: 394 IEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCV 453

Query: 249 MLDSFCKEGEMQEALELLWEMQGR-GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
           ++D  CK   + +A++    M    G  PN   Y  +I G  +  +++ A  L   M + 
Sbjct: 454 LIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQE 513

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           GL     +Y  ++ G  ++G ++EAL L ++M   G+   L  Y  L++G  +  ++  A
Sbjct: 514 GLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKA 573

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           R    EM+ + ++PD +    +L  +   G I EA  L   L    L+ +
Sbjct: 574 RSFLEEMIGEEILPDEVLCIGVLKKHYELGCIDEAVGLQSYLMKHQLLTS 623


>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
 gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
          Length = 834

 Score =  261 bits (668), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 139/434 (32%), Positives = 238/434 (54%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G  P+IV YNT++D +CK+GE++ A +L  +++ +G  P   T+  L+ GF + G  E  
Sbjct: 238 GCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAI 297

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L+ +M   GL V+   YN II    + G  ++A +  +EM      P L TYN LI  
Sbjct: 298 DLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINH 357

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
            C  G V +A     + +R+ + P+ ++Y  L++GYC+ G   +A     E+ +  L   
Sbjct: 358 FCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVD 417

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           +++Y  LI GL   G+++ A  +++ M+N+GILPD   Y +++NG  K G LSMA+    
Sbjct: 418 MISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLT 477

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           EML + + PD F Y T + G ++ G+  EA +L + ++ KG  P ++ YNV++ G  K G
Sbjct: 478 EMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSG 537

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            ++ A   + KM     +PD  T+++II   ++  ++     +F  M+++   P +VTYT
Sbjct: 538 MMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYT 597

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
            LI+ +  +G  ++A   FS M+  G++P+V+TY+ LI   C+  ++ +A   F  M   
Sbjct: 598 SLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLIN 657

Query: 658 GILPNKYTYTILIN 671
              PN   +  L+N
Sbjct: 658 KCTPNDAAFHYLVN 671



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 150/524 (28%), Positives = 255/524 (48%), Gaps = 7/524 (1%)

Query: 205 LPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIK-PSIVTYNTMLDSFCKEGEMQEAL 263
           +P  +  + ++    D G   KA EVY  + +     PS    N++L+   K   ++ A 
Sbjct: 130 IPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLVKHRRIETAH 189

Query: 264 ELLWEM----QGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI 319
           +L  EM     G     +  T ++++ G    G +E    LI      G   +   YN +
Sbjct: 190 QLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCVPNIVFYNTL 249

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           I GY +KG +  A  L +++  +G  PTL T+  L+ G CK G          EM  + +
Sbjct: 250 IDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGL 309

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
             ++  YN ++    + G   +A     E+      P +VTYNTLI+  C  G++E A++
Sbjct: 310 SVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEK 369

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           L E  I +G+ P+ +TYT +V+G CK G  + A ++  EM   GL+ D  +Y   I G +
Sbjct: 370 LLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLV 429

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
             G+   A  +++ M+ +G  PD   YNVL++GL K G L  A  +L +M+     PD  
Sbjct: 430 VAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAF 489

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
            Y +++   +  G+L   + LF  ++ KGL P +V Y V+I   +  G ++ A +   +M
Sbjct: 490 VYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKM 549

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
           +     P++ T++ +I+G  +   ++    +F  M ++   PN  TYT LIN  C  G  
Sbjct: 550 RRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGET 609

Query: 680 QEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKV-HAVEYLE 722
           + A +L+  M    ++P   T+S +L+    K+ K+  AV Y E
Sbjct: 610 KMAEKLFSMMRSHGLKPSVVTYS-ILIGSFCKEAKLGKAVSYFE 652



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 140/529 (26%), Positives = 232/529 (43%), Gaps = 84/529 (15%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K  M E   L+  +M   GL  +V+  N II      GF +KA++  + M E   +P 
Sbjct: 288 FCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPD 347

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +VTYNT+++ FC  GE++EA +LL +   RG +PN +TY  L+ G+ + GE  +A   + 
Sbjct: 348 LVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLI 407

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M   GL+V   SY  +I G    G +  AL + + M+ RG+ P    YN+L+ GL K G
Sbjct: 408 EMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKG 467

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE--------------------- 401
           ++S A+    EML +N+ PD   Y TL+ G+ R GN+ E                     
Sbjct: 468 KLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYN 527

Query: 402 --------------AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
                         A L  D++R  + VP + T++T+IDG  +  ++    ++   M+ Q
Sbjct: 528 VMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQ 587

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG---ELKLGDT 504
              P+V+TYT ++NG C+ G   MA + F+ M   GL+P    Y+  I     E KLG  
Sbjct: 588 NCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKA 647

Query: 505 SEAYRLQ----------------------------------------------EEMLAKG 518
              + L                                                 M+  G
Sbjct: 648 VSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDG 707

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
           +      YN ++  LC+   ++ A +L  KM+  G   D +++ ++IH     G+ +  R
Sbjct: 708 WTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWR 767

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
           ++ +  L +G     + Y++ +      G +  A      M    + PN
Sbjct: 768 NMISCDLNEGELQIALKYSLELDKFIPEGGISEASGILQAMIKGYVSPN 816



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/320 (23%), Positives = 141/320 (44%), Gaps = 14/320 (4%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + +   +++   +F  ++  GL P V   N +IK    +G    A      M      P 
Sbjct: 498 FIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPD 557

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           I T++T++D + K+  M   L++   M  + C PN VTY  LI G+ R GE + A  L  
Sbjct: 558 IFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFS 617

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M   GLK S  +Y+ +I  + ++  L +A++  E M+     P  A ++ L+ G     
Sbjct: 618 MMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTK 677

Query: 363 RVSDARH---------RFFEMLRKNVIPD-----IISYNTLLYGYCRSGNIGEAFLLFDE 408
             + +R            FE     +I D       +YN +L   C+   +  A  L ++
Sbjct: 678 ATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCILICLCQQRMVKTALQLRNK 737

Query: 409 LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
           + +  L    V++  LI G+C  G+ +  + +    +N+G L   + Y++ ++     G 
Sbjct: 738 MLAFGLCSDAVSFVALIHGICLEGNSKEWRNMISCDLNEGELQIALKYSLELDKFIPEGG 797

Query: 469 LSMAREFFNEMLRKGLQPDR 488
           +S A      M++  + P++
Sbjct: 798 ISEASGILQAMIKGYVSPNQ 817


>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
          Length = 770

 Score =  261 bits (668), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 161/574 (28%), Positives = 282/574 (49%), Gaps = 43/574 (7%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLR-NGLLPDVKNCNRIIKVLRDNGFSVKAREV 230
           SIK  ++L+        ++    VF +M   N + PDV     +IK L   G   +    
Sbjct: 179 SIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAG---EIDAA 235

Query: 231 YRMMGEF---GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITG 287
           + M+ E    GI+P++VTYN ++D+ C+ G ++EA +L   M      P+ VT+ +LI G
Sbjct: 236 FVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILING 295

Query: 288 FSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPT 347
            +R     +   ++++M   G+  +   YN +I  +  +G   EAL L +EMV++G+  T
Sbjct: 296 LARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQT 355

Query: 348 LATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR-SGNIGEAFLLF 406
           + TYN++   LCK G +  A     EML   +      +N+++  + R +G +     L 
Sbjct: 356 VVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLI 415

Query: 407 DELRSRNLVPT-----------------------------------VVTYNTLIDGLCRY 431
            E+ +R L P                                    + T N LI GLC+ 
Sbjct: 416 REMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQG 475

Query: 432 GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAY 491
            +++ A ++ + M++ G+  D ITY IM+   CK   +  A +  ++M+++G +PD F +
Sbjct: 476 NNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTF 535

Query: 492 TTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
            T +     LG   +   L ++M ++G  PD++TY  ++ G CK   + +AN+ L +++ 
Sbjct: 536 NTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIK 595

Query: 552 DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLEL 611
           +G  P+ + Y ++I      G +     + + M   G+ PT +TY  L++     G +E 
Sbjct: 596 NGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEE 655

Query: 612 AFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
           A   F++  +K I   VI Y  +I G C++ +ID+A   F +M    I PNK TYT L+ 
Sbjct: 656 AKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMY 715

Query: 672 ENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             C  GN +EA +L+ EM+   I PD  +++ L+
Sbjct: 716 AYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLI 749



 Score =  248 bits (634), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 148/514 (28%), Positives = 252/514 (49%), Gaps = 1/514 (0%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           ++L+    +   VE+   +  +M+   L P +     +I  L       +   V + M  
Sbjct: 255 NVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEG 314

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
           FGI P+ V YN ++   C+EG   EAL L  EM  +G     VTYN++     + GE+E 
Sbjct: 315 FGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEH 374

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGY-SEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
           A  ++ +ML  G+ V    +N ++  +    G L   L L  EMV R + P  A     I
Sbjct: 375 AEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACI 434

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
             LCK G+  +A   +F +L K +  +I + N L++G C+  N+ EA  +   +    + 
Sbjct: 435 QELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVE 494

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
              +TYN +I   C+   +E A QL+++MI +G  PD+ T+   +   C +G +      
Sbjct: 495 FDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHL 554

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
            ++M  +GL+PD   Y T I G  K  D  +A +   E++  G  P+ + YN L+ G  +
Sbjct: 555 LDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGR 614

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
            GS+ +A  +L  M  +G  P  ITY S+++     G +   +++F   + K +   ++ 
Sbjct: 615 NGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIG 674

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           YT++I      G+++ A MYF EM  + IRPN +TY  L+   C+    ++A+ LF +M 
Sbjct: 675 YTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMV 734

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
             GI+P+  +Y  LI+  C   +  + +    EM
Sbjct: 735 SSGIVPDTVSYNTLISGCCEVDSLDKIVESPAEM 768



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 142/513 (27%), Positives = 248/513 (48%), Gaps = 37/513 (7%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF-GIKPSIVTYNTMLDSF 253
            F ++   G  P +K CN +++ L   G    AR+V+  M +   + P + TY  M+ + 
Sbjct: 167 AFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKAL 226

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           C+ GE+  A  +L E++  G  P  VTYNVL+    R+G +E                  
Sbjct: 227 CRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVE------------------ 268

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
                            EA  L+  MV   + P++ T+ ILI GL +  R  +      E
Sbjct: 269 -----------------EAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQE 311

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M    + P+ + YN L+  +CR G+  EA  LFDE+ S+ +  TVVTYN +   LC+ G+
Sbjct: 312 MEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGE 371

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCK-MGNLSMAREFFNEMLRKGLQPDRFAYT 492
           +E A+Q+ + M+  G+      +  +V    +  G L +      EM+ + L+P+    T
Sbjct: 372 MEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMT 431

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
             I    K G   EA  +   +L KG   ++ T N L+HGLC+  +++EA ++L+ MV  
Sbjct: 432 ACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDS 491

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
           G   D ITY  +I    +   +     L ++M+++G  P L T+   + A+   G++E  
Sbjct: 492 GVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDI 551

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
                +M+ +G++P+++TY  +I+G C+ + + +A    I++ + G+ PN   Y  LI  
Sbjct: 552 LHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGG 611

Query: 673 NCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
               G+  +A+ +   M    I+P   T+++L+
Sbjct: 612 YGRNGSISDAIGVLDTMKHNGIQPTPITYNSLM 644



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 121/434 (27%), Positives = 210/434 (48%), Gaps = 5/434 (1%)

Query: 145 WVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGL 204
           W      C     + D ++  G+    ++   +L+     K+  +E    + ++ML  G+
Sbjct: 330 WHCREGHCSEALRLFDEMVSKGIKQ--TVVTYNLIAKALCKEGEMEHAEQILDEMLLAGM 387

Query: 205 LPDVKNCNRIIKV-LRDNG-FSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
                  N ++   LR  G   V  R +  M+  F +KP+       +   CK G+ +EA
Sbjct: 388 TVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVARF-LKPNDAVMTACIQELCKRGKHEEA 446

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
            E+ + + G+G   N  T N LI G  +   +++A  +++ M+  G++    +YN +I  
Sbjct: 447 AEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQF 506

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
             +   + EA+ L ++M+ RG  P L T+N  +   C  G+V D  H   +M  + + PD
Sbjct: 507 CCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPD 566

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
           I++Y T++ GYC++ ++ +A     EL    L P  V YN LI G  R G +  A  + +
Sbjct: 567 IVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLD 626

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            M + GI P  ITY  ++   C  G +  A+E F + + K ++     YT  I G  K+G
Sbjct: 627 TMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIG 686

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
              EA    +EM  +   P+ +TY  L++  CK G+ EEA +L  +MV  G +PD ++Y 
Sbjct: 687 KIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYN 746

Query: 563 SIIHASLEMGDLRR 576
           ++I    E+  L +
Sbjct: 747 TLISGCCEVDSLDK 760



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 75/218 (34%), Positives = 118/218 (54%), Gaps = 3/218 (1%)

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV-GDGFIPDHITYTSIIHASLEM 571
           E+  +G  P + T N+LV  L   G L+ A ++  +M  G+   PD  TYT +I A    
Sbjct: 170 ELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRA 229

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
           G++     +   + R G+ PT+VTY VL+ A    GR+E AF     M    +RP+++T+
Sbjct: 230 GEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTF 289

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
             LINGL R +R  +   +  +ME  GI PN+  Y  LI  +C  G+  EALRL+ EM+ 
Sbjct: 290 GILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVS 349

Query: 692 REIEPDYCTHSALLLKQLDKDYKV-HAVEYLESLTLGA 728
           + I+    T++ L+ K L K+ ++ HA + L+ + L  
Sbjct: 350 KGIKQTVVTYN-LIAKALCKEGEMEHAEQILDEMLLAG 386



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 70/135 (51%), Gaps = 1/135 (0%)

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ-VKGIRPNVIT 630
           G L    D F  +  +G SP++ T  +L+ A    G+L+LA   F EM+    + P+V T
Sbjct: 159 GSLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYT 218

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           Y  +I  LCR   ID A+ +  ++E  GI P   TY +L++  C +G  +EA +L   M+
Sbjct: 219 YTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMV 278

Query: 691 DREIEPDYCTHSALL 705
           +  + P   T   L+
Sbjct: 279 EGRLRPSIVTFGILI 293



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 77/167 (46%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           I + L+  Y +   +   + V + M  NG+ P     N ++  +   G   +A+E++   
Sbjct: 604 IYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQC 663

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
               I+  ++ Y  ++  FCK G++ EA+    EM  R   PN +TY  L+  + + G  
Sbjct: 664 ILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNK 723

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
           E+A  L  +M+  G+     SYN +I G  E   L + +    EM +
Sbjct: 724 EEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDKIVESPAEMSS 770


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  261 bits (667), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 147/515 (28%), Positives = 264/515 (51%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K+   ++    +++ML   + PDV   + II  L       KA EV   M + G+ P+
Sbjct: 206 FFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPN 265

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            +TYN++L  +C   + +EA+  L +M+  G  P+ VTYN L+    +NG   +AR +  
Sbjct: 266 CMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFD 325

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M K GL+    +Y  ++ GY+ KG LVE   L + MV  G+ P    +NILI    K  
Sbjct: 326 SMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQE 385

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           +V +A   F +M +  + P++++Y  ++   C+SG++ +A L F+++    L P ++ Y 
Sbjct: 386 KVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYT 445

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           +LI  LC +   + A++L   M+++GI  + I +  +++  CK G +  + + F+ M+R 
Sbjct: 446 SLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRI 505

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G++P+   Y+T I G    G   EA +L   M + G  PD +TYN L++G C++  +++A
Sbjct: 506 GVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDA 565

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             L ++MV  G  P+ ITY  I+            ++L+  + + G    L TY +++H 
Sbjct: 566 LALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHG 625

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
                  + A   F  + +  ++    T+N +I  L ++ R D+A  LF+     G++PN
Sbjct: 626 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPN 685

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
            +TY ++       G  +E  +L+  M D     D
Sbjct: 686 YWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVD 720



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 143/445 (32%), Positives = 228/445 (51%), Gaps = 3/445 (0%)

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM---QGRGCSPNGVTYNVLIT 286
           V R M E    P + +   +L   C E   QEALELL  M   +G G +P+ V+Y  +I 
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVIN 204

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           GF + G+ ++A     +ML   +     +Y+ II    +   + +A+ +   MV  GV P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMP 264

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
              TYN +++G C   +  +A     +M    V PD+++YN+L+   C++G   EA  +F
Sbjct: 265 NCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIF 324

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
           D +  R L P + TY TL+ G    G L     L + M+  GI PD   + I++    K 
Sbjct: 325 DSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQ 384

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
             +  A   F++M + GL P+   Y   I    K G   +A    E+M+ +G  P++I Y
Sbjct: 385 EKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVY 444

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
             L+H LC     ++A EL+ +M+  G   + I + SIIH+  + G +     LF+ M+R
Sbjct: 445 TSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVR 504

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
            G+ P ++TY+ LI  +   G+++ A    S M   G++P+ +TYN LING CR+ R+D 
Sbjct: 505 IGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDD 564

Query: 647 AYGLFIDMEEEGILPNKYTYTILIN 671
           A  LF +M   G+ PN  TY I++ 
Sbjct: 565 ALALFKEMVSSGVSPNIITYNIILQ 589



 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 162/564 (28%), Positives = 272/564 (48%), Gaps = 46/564 (8%)

Query: 194 LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE---FGIKPSIVTYNTML 250
           +V  +M     +PDV +C  ++K L D   S +A E+  MM +    G  P +V+Y T++
Sbjct: 144 IVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVI 203

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
           + F KEG+  +A     EM  R  SP+ VTY+ +I    +   +++A  ++  M+K G+ 
Sbjct: 204 NGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVM 263

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
            +  +YN I+ GY       EA+   ++M + GV P + TYN L+  LCK GR ++AR  
Sbjct: 264 PNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKI 323

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSG--------------------------------- 397
           F  M ++ + PDI +Y TLL GY   G                                 
Sbjct: 324 FDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAK 383

Query: 398 --NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
              + EA L+F ++R   L P VVTY  +I  LC+ G ++ A    E MI++G+ P++I 
Sbjct: 384 QEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIV 443

Query: 456 YTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML 515
           YT +++  C       A E   EML +G+  +   + + I    K G   E+ +L + M+
Sbjct: 444 YTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMV 503

Query: 516 AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLR 575
             G  P++ITY+ L+ G C  G ++EA +LL  M   G  PD +TY ++I+    +  + 
Sbjct: 504 RIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMD 563

Query: 576 RGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALI 635
               LF  M+  G+SP ++TY +++       R   A   +  +   G +  + TYN ++
Sbjct: 564 DALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIIL 623

Query: 636 NGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIE 695
           +GLC+    D+A  +F ++    +     T+ I+I      G   EA  L+       + 
Sbjct: 624 HGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLV 683

Query: 696 PDYCTHSAL--------LLKQLDK 711
           P+Y T+  +        LL++LD+
Sbjct: 684 PNYWTYRLMAENIIGQGLLEELDQ 707



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 149/552 (26%), Positives = 258/552 (46%), Gaps = 41/552 (7%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM--GEFGIKPSIVTYNTMLDS 252
           VF+++LR G    +   NR +  +  +  +       RM   G   + P++ TY  ++  
Sbjct: 37  VFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYGILIGC 96

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI-RDMLKL---- 307
            C+ G +      L  +  +G     +T+  L+ G   +     A  ++ R M +L    
Sbjct: 97  CCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMP 156

Query: 308 ----------------------------------GLKVSAHSYNPIICGYSEKGLLVEAL 333
                                             G      SY  +I G+ ++G   +A 
Sbjct: 157 DVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAY 216

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
           +   EM+ R ++P + TY+ +I  LCK   +  A      M++  V+P+ ++YN++L+GY
Sbjct: 217 STYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGY 276

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
           C S    EA     ++RS  + P VVTYN+L+D LC+ G    A+++ ++M  +G+ PD+
Sbjct: 277 CSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDI 336

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
            TY  ++ G    G L       + M+R G+ PD   +   I    K     EA  +  +
Sbjct: 337 ATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSK 396

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           M   G  P+++TY  ++  LCK GS+++A     +M+ +G  P+ I YTS+IH+      
Sbjct: 397 MRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDK 456

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
             +  +L   ML +G+    + +  +IH+H   GR+  +   F  M   G++PNVITY+ 
Sbjct: 457 WDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYST 516

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
           LI+G C   ++D+A  L   M   G+ P+  TY  LIN  C      +AL L+KEM+   
Sbjct: 517 LIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSG 576

Query: 694 IEPDYCTHSALL 705
           + P+  T++ +L
Sbjct: 577 VSPNIITYNIIL 588



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/489 (26%), Positives = 226/489 (46%), Gaps = 35/489 (7%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y      ++ +    KM  +G+ PDV   N ++  L  NG S +AR+++  M + G++P 
Sbjct: 276 YCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPD 335

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           I TY T+L  +  +G + E   LL  M   G  P+   +N+LI  +++  ++++A  +  
Sbjct: 336 IATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFS 395

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC--- 359
            M + GL  +  +Y  +I    + G + +A+   E+M+  G+ P +  Y  LI+ LC   
Sbjct: 396 KMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFD 455

Query: 360 KW--------------------------------GRVSDARHRFFEMLRKNVIPDIISYN 387
           KW                                GRV ++   F  M+R  V P++I+Y+
Sbjct: 456 KWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYS 515

Query: 388 TLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
           TL+ GYC +G + EA  L   + S  + P  VTYNTLI+G CR   ++ A  L + M++ 
Sbjct: 516 TLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSS 575

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
           G+ P++ITY I++ G       + A+E +  + + G Q +   Y   + G  K   T EA
Sbjct: 576 GVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEA 635

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
            R+ + +       +  T+N+++  L K+G  +EA +L      +G +P++ TY  +   
Sbjct: 636 LRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAEN 695

Query: 568 SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
            +  G L     LF +M   G +        ++     RG +  A  Y S +  K     
Sbjct: 696 IIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLE 755

Query: 628 VITYNALIN 636
             T +  I+
Sbjct: 756 ASTASLFID 764



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 132/442 (29%), Positives = 198/442 (44%), Gaps = 43/442 (9%)

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG---VAPTLATY 351
           E AR +  ++L+ G   S +  N  +   +       A++    M   G   V PT+ TY
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARHSP-AAAVSRYNRMARAGAGKVTPTVHTY 90

Query: 352 NILI-----------------------------------YGLCKWGRVSDARHRFF-EML 375
            ILI                                    GLC   R SDA       M 
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL---RSRNLVPTVVTYNTLIDGLCRYG 432
             + +PD+ S   LL G C      EA  L   +   R     P VV+Y T+I+G  + G
Sbjct: 151 ELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEG 210

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
           D + A      M+++ I PDV+TY+ ++   CK   +  A E    M++ G+ P+   Y 
Sbjct: 211 DSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYN 270

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
           + + G        EA    ++M + G  PD++TYN L+  LCK G   EA ++   M   
Sbjct: 271 SILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKR 330

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
           G  PD  TY +++      G L     L + M+R G+ P    + +LI A+A + +++ A
Sbjct: 331 GLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEA 390

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
            + FS+M+  G+ PNV+TY A+I  LC+   +D A   F  M +EG+ PN   YT LI+ 
Sbjct: 391 MLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHS 450

Query: 673 NCNAGNWQEALRLYKEMLDREI 694
            C    W +A  L  EMLDR I
Sbjct: 451 LCIFDKWDKAEELILEMLDRGI 472



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 133/499 (26%), Positives = 229/499 (45%), Gaps = 15/499 (3%)

Query: 102 EKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDV 161
           E+P+ A+ F + + +  GV+ D   + ++++ L ++G    A              I D 
Sbjct: 280 EQPKEAIGFLKKMRSD-GVEPDVVTYNSLMDYLCKNGRSTEA------------RKIFDS 326

Query: 162 LIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDN 221
           +   GL     I     LL  Y  K  + +   + + M+RNG+ PD    N +I      
Sbjct: 327 MTKRGLEP--DIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQ 384

Query: 222 GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY 281
               +A  V+  M + G+ P++VTY  ++   CK G + +A+    +M   G +PN + Y
Sbjct: 385 EKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVY 444

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
             LI       + ++A  LI +ML  G+ ++   +N II  + ++G ++E+  L + MV 
Sbjct: 445 TSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVR 504

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
            GV P + TY+ LI G C  G++ +A      M    + PD ++YNTL+ GYCR   + +
Sbjct: 505 IGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDD 564

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           A  LF E+ S  + P ++TYN ++ GL        A++L   +   G   ++ TY I+++
Sbjct: 565 ALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILH 624

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
           G CK      A   F  +    LQ +   +   I   LK+G   EA  L     + G  P
Sbjct: 625 GLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVP 684

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           +  TY ++   +   G LEE ++L   M  +G   D      I+   L+ G++ R     
Sbjct: 685 NYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYL 744

Query: 582 NNMLRKGLSPTLVTYTVLI 600
           + +  K  S    T ++ I
Sbjct: 745 SMIDEKHFSLEASTASLFI 763



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 57/275 (20%), Positives = 108/275 (39%), Gaps = 25/275 (9%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLV---------------FNKMLRNGLLPDVKNCNRIIK 216
           S K+ DL++ I  K +++    L+                + M   G+ PD    N +I 
Sbjct: 495 SEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLI- 553

Query: 217 VLRDNGFSVKAR-----EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
               NG+   +R      +++ M   G+ P+I+TYN +L           A EL   +  
Sbjct: 554 ----NGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITK 609

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
            G      TYN+++ G  +N   ++A  + +++    L++   ++N +I    + G   E
Sbjct: 610 SGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDE 669

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
           A +L     + G+ P   TY ++   +   G + +    FF M       D    N ++ 
Sbjct: 670 AKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVR 729

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
              + G I  A      +  ++      T +  ID
Sbjct: 730 ELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 764


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  261 bits (667), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 160/539 (29%), Positives = 266/539 (49%), Gaps = 7/539 (1%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV-YRMMGEFGIKPSIVTYNTMLDSF 253
              +++R+G   +    + ++K L D   + +A ++  R M   G  P++ +Y  +L   
Sbjct: 113 ALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGL 172

Query: 254 CKEGEMQEALELLWEMQGR-----GCSPNGVTYNVLITGFSRNG-ELEQARGLIRDMLKL 307
           C E   Q+AL LL  M        G  P+ V+YN +I G  R G +L+ A  L   ML  
Sbjct: 173 CDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQ 232

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           GL     +YN II   S+   + +A  +   MV  G  P   T+N L++G C  G+ +DA
Sbjct: 233 GLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDA 292

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
              F  M R  V PD+ +YNTL+   C++G   EA  +FD +  R   P   TY TL+ G
Sbjct: 293 IGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHG 352

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
               G L     L + M+  GI PD   + I++    K G +  A   F++M R+GL PD
Sbjct: 353 YATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPD 412

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              Y   +     +G   +A      ++++G  PD + +  L+HGLC     ++A EL  
Sbjct: 413 TVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAV 472

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
           +M+G G  P++I + ++++   + G + R +++F+ M+R  +   ++TY  LI  +   G
Sbjct: 473 EMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHG 532

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
           +++ A      M + G++PN +TYN +ING C+  RI+ A+ LF  M  +G+ P   TY+
Sbjct: 533 KVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYS 592

Query: 668 ILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
            ++     A     A  LY  M+   I+ D  T++ +LL     +    A+   ++L L
Sbjct: 593 TILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYL 651



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 167/572 (29%), Positives = 279/572 (48%), Gaps = 12/572 (2%)

Query: 99  RIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGI 158
           R  E   IALR    +   P V    F +  +L+ L +    + A  ++ T++      +
Sbjct: 141 RTSEAMDIALRRMPVLGCTPNV----FSYTILLKGLCDENRSQQALHLLHTMM------V 190

Query: 159 LDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL 218
            D   GG     VS   +   LL   ++  ++    +F++ML  GL PDV   N II  L
Sbjct: 191 ADDTRGGYPPDVVSYNTVINGLLREGRQ--LDTAYHLFDQMLDQGLSPDVVTYNSIISAL 248

Query: 219 RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNG 278
                  KA  V   M + G  P+ +T+N++L  +C  G+  +A+ +   M   G  P+ 
Sbjct: 249 SKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDV 308

Query: 279 VTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
            TYN L+    +NG   +AR +   M+K G K ++ +Y  ++ GY+ +G LV+  +L + 
Sbjct: 309 FTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDM 368

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
           MV  G+ P    +NILI    K G+V DA   F +M R+ + PD ++Y  ++   C  G 
Sbjct: 369 MVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGK 428

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           + +A   F  L S  L P  V +  LI GLC     + A++L   MI +GI P+ I +  
Sbjct: 429 VDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNT 488

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           ++N  CK G ++ A+  F+ M+R  +Q D   Y T I G    G   EA +L E M+  G
Sbjct: 489 LLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDG 548

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
             P+ +TYN +++G CK G +E+A  L R+M   G  P  +TY++I+    +       +
Sbjct: 549 VKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAK 608

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           +L+  M++ G+   + TY +++         + A   F  + +        T+N +I+ L
Sbjct: 609 ELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDAL 668

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
            +  R D+A  LF  +   G++PN  TY +++
Sbjct: 669 LKGGRHDEAKDLFASLLARGLVPNVVTYWLMM 700



 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 153/526 (29%), Positives = 263/526 (50%), Gaps = 7/526 (1%)

Query: 190 EQCLLVFNKML-----RNGLLPDVKNCNRIIKVLRDNGFSVK-AREVYRMMGEFGIKPSI 243
           +Q L + + M+     R G  PDV + N +I  L   G  +  A  ++  M + G+ P +
Sbjct: 179 QQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDV 238

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           VTYN+++ +  K   M +A  +L  M   G  PN +T+N L+ G+  +G+   A G+ + 
Sbjct: 239 VTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKR 298

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M + G++    +YN ++    + G  +EA  + + MV RG  P  ATY  L++G    G 
Sbjct: 299 MCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGS 358

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           +    H    M+R  + PD   +N L+  Y + G + +A LLF ++R + L P  VTY  
Sbjct: 359 LVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGI 418

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           ++D LC  G ++ A      +I++G+ PD + +  +++G C       A E   EM+ +G
Sbjct: 419 VMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRG 478

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           + P+   + T +    K G  + A  + + M+      D+ITYN L+ G C  G ++EA 
Sbjct: 479 ICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAA 538

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
           +LL  MV DG  P+ +TY ++I+   + G +     LF  M  KG++P +VTY+ ++   
Sbjct: 539 KLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGL 598

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
               R   A   +  M   GI+ ++ TYN ++ GLC+    D A  +F ++         
Sbjct: 599 FQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLEN 658

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQL 709
            T+ I+I+     G   EA  L+  +L R + P+  T+  L++K L
Sbjct: 659 RTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTY-WLMMKSL 703



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 135/437 (30%), Positives = 228/437 (52%), Gaps = 7/437 (1%)

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           PN +TY+V+I   SR G L+ A   +  +++ G    A +++P++    +K    EA+++
Sbjct: 89  PNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDI 148

Query: 336 E-EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML-----RKNVIPDIISYNTL 389
               M   G  P + +Y IL+ GLC   R   A H    M+     R    PD++SYNT+
Sbjct: 149 ALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTV 208

Query: 390 LYGYCRSG-NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
           + G  R G  +  A+ LFD++  + L P VVTYN++I  L +   ++ A  +   M+  G
Sbjct: 209 INGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNG 268

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
            +P+ IT+  +++G C  G  + A   F  M R G++PD F Y T +    K G + EA 
Sbjct: 269 AMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEAR 328

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
           ++ + M+ +G  P+  TY  L+HG    GSL + + LL  MV +G  PDH  +  +I   
Sbjct: 329 KIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTY 388

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
            + G +     LF+ M R+GL+P  VTY +++ A    G+++ A   F  +  +G+ P+ 
Sbjct: 389 TKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDA 448

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
           + +  LI+GLC   + D+A  L ++M   GI PN   +  L+N  C  G    A  ++  
Sbjct: 449 VVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDL 508

Query: 689 MLDREIEPDYCTHSALL 705
           M+  +++ D  T++ L+
Sbjct: 509 MVRVDVQRDVITYNTLI 525



 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 136/515 (26%), Positives = 251/515 (48%), Gaps = 42/515 (8%)

Query: 233 MMGEFGIKPSIVTYNTMLD-----------------------------------SFCKEG 257
           M+    + P+++TY+ ++D                                   + C + 
Sbjct: 81  MVARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKK 140

Query: 258 EMQEALEL-LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML-----KLGLKV 311
              EA+++ L  M   GC+PN  +Y +L+ G       +QA  L+  M+     + G   
Sbjct: 141 RTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPP 200

Query: 312 SAHSYNPIICGYSEKGLLVE-ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
              SYN +I G   +G  ++ A +L ++M+ +G++P + TYN +I  L K   +  A   
Sbjct: 201 DVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVV 260

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
              M++   +P+ I++N+LL+GYC SG   +A  +F  +    + P V TYNTL+  LC+
Sbjct: 261 LVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCK 320

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
            G    A+++ ++M+ +G  P+  TY  +++G    G+L       + M+R G+QPD + 
Sbjct: 321 NGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYI 380

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           +   I    K G   +A  L  +M  +G  PD +TY +++  LC +G +++A     +++
Sbjct: 381 FNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLI 440

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
            +G  PD + + ++IH         +  +L   M+ +G+ P  + +  L++     G + 
Sbjct: 441 SEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVA 500

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
            A   F  M    ++ +VITYN LI+G C   ++D+A  L   M  +G+ PN+ TY  +I
Sbjct: 501 RAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMI 560

Query: 671 NENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           N  C  G  ++A  L+++M  + + P   T+S +L
Sbjct: 561 NGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTIL 595



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 157/579 (27%), Positives = 281/579 (48%), Gaps = 51/579 (8%)

Query: 115 ETQPGVKRDEFVFCTILEILIESG-LLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSI 173
           +T+ G   D   + T++  L+  G  L +AY             + D ++  GLS    +
Sbjct: 193 DTRGGYPPDVVSYNTVINGLLREGRQLDTAYH------------LFDQMLDQGLSP--DV 238

Query: 174 KILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRM 233
              + ++   +K   +++  +V  +M++NG +P+    N ++     +G    A  V++ 
Sbjct: 239 VTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKR 298

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M   G++P + TYNT++   CK G   EA ++   M  RG  PN  TY  L+ G++  G 
Sbjct: 299 MCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGS 358

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           L +   L+  M++ G++   + +N +I  Y++ G + +A+ L  +M  +G+ P   TY I
Sbjct: 359 LVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGI 418

Query: 354 LIYGLCKWGRVSDARHRF-----------------------------------FEMLRKN 378
           ++  LC  G+V DA  +F                                    EM+ + 
Sbjct: 419 VMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRG 478

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
           + P+ I +NTLL   C+ G +  A  +FD +   ++   V+TYNTLIDG C +G ++ A 
Sbjct: 479 ICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAA 538

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
           +L E M+  G+ P+ +TY  M+NG CK G +  A   F +M  KG+ P    Y+T + G 
Sbjct: 539 KLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGL 598

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
            +   T+ A  L   M+  G   D+ TYN+++ GLC+    ++A  + + +    F  ++
Sbjct: 599 FQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLEN 658

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
            T+  +I A L+ G     +DLF ++L +GL P +VTY +++ +   +G LE     F  
Sbjct: 659 RTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLS 718

Query: 619 MQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           ++  G   N    NAL+  L +   + +A G+++   +E
Sbjct: 719 LEKNGCTANSRMLNALVGKLLQKGEVRKA-GVYLSKIDE 756



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/343 (27%), Positives = 160/343 (46%), Gaps = 7/343 (2%)

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
           R   + R  V P++I+Y+ ++    R G++  AF     +         +T++ L+  LC
Sbjct: 78  RMVMVARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALC 137

Query: 430 RYGDLEVAQQLK-ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML-----RKG 483
                  A  +    M   G  P+V +YTI++ G C       A    + M+     R G
Sbjct: 138 DKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGG 197

Query: 484 LQPDRFAYTTQIAGELKLG-DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
             PD  +Y T I G L+ G     AY L ++ML +G  PD++TYN ++  L K  ++++A
Sbjct: 198 YPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKA 257

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             +L +MV +G +P+ IT+ S++H     G       +F  M R G+ P + TY  L+  
Sbjct: 258 AVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGY 317

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
               GR   A   F  M  +G +PN  TY  L++G      + + + L   M   GI P+
Sbjct: 318 LCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPD 377

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            Y + ILI      G   +A+ L+ +M  + + PD  T+  ++
Sbjct: 378 HYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVM 420



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 9/140 (6%)

Query: 560 TYTSIIHASLEMGDLRRGR-----DLFNNML---RKGLSPTLVTYTVLIHAHAARGRLEL 611
           T +SI+  +  + D  R        LF  M+   R  + P L+TY+V+I   +  G L+L
Sbjct: 50  TTSSIVDLNRALSDAARHSPAVAISLFRRMVMVARPKVPPNLITYSVVIDCCSRVGHLDL 109

Query: 612 AFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI-DMEEEGILPNKYTYTILI 670
           AF     +   G     IT++ L+  LC  +R  +A  + +  M   G  PN ++YTIL+
Sbjct: 110 AFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILL 169

Query: 671 NENCNAGNWQEALRLYKEML 690
              C+    Q+AL L   M+
Sbjct: 170 KGLCDENRSQQALHLLHTMM 189


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  261 bits (667), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 151/483 (31%), Positives = 254/483 (52%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           ++  + +F +++    LP V   N I+  +        A  + + MG  GI PSIVT + 
Sbjct: 59  IDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSI 118

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++ +C  G M  A  +L  +  RG   N +T   ++ G   NGE+ +A      ++  G
Sbjct: 119 LINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQG 178

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
             +   +Y  +I G  + GL  EA  L  +M  + V P +  YN+++ GLCK G V++AR
Sbjct: 179 FLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEAR 238

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             + +++ + + PD+ +Y  L++G+C  G   E   L  ++  RN+   V TYN LID L
Sbjct: 239 DLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDAL 298

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G L  A  ++  MI +G  PD++T+  +++G C   ++  AR+ F+     G+ PD 
Sbjct: 299 CKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDV 358

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
           ++Y   I G  K     EA  L  +M  K   P+++TY+ L+ GLCK G +  A EL   
Sbjct: 359 WSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSA 418

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           +   G  P+ ITY  ++ A  ++  + +  +LFN M  +GL+P + +Y +LI+ +    R
Sbjct: 419 IHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKR 478

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           ++ A   F EM  + + P+ +TYN LI+GLC+  RI  A+ LF  M + G   +  TY I
Sbjct: 479 IDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNI 538

Query: 669 LIN 671
           L +
Sbjct: 539 LFD 541



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 146/465 (31%), Positives = 241/465 (51%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PS+V +N +L S  K      A+ L  +M  RG +P+ VT ++LI  +   G +  A  +
Sbjct: 76  PSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSV 135

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  +LK G +++A +   I+ G    G + +AL   + +V +G      TY  LI GLCK
Sbjct: 136 LGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCK 195

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G   +A     +M  + V P+++ YN ++ G C+ G + EA  L+ ++  R + P V T
Sbjct: 196 IGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFT 255

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y  LI G C  G      +L  +M+++ +  +V TY I+++  CK G L  A +  N M+
Sbjct: 256 YTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMI 315

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            +G +PD   + T ++G     D  EA +L +     G  PD+ +YN+L+ G CK   ++
Sbjct: 316 ERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRID 375

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA  L  KM      P+ +TY+S+I    + G +    +LF+ +   G SP ++TY +++
Sbjct: 376 EALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIML 435

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
            A      ++ A   F+ M  +G+ PNV +YN LING C+ +RID+A  LF +M    ++
Sbjct: 436 DALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLV 495

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           P+  TY  LI+  C +G    A  L+  M D     D  T++ L 
Sbjct: 496 PDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILF 540



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 134/379 (35%), Positives = 204/379 (53%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V + L   + ++  G L D      +I  L   G + +A E+   M    ++P++V YN 
Sbjct: 164 VRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNM 223

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++D  CK+G + EA +L  ++ GRG  P+  TY  LI GF   G+  +   L+ DM+   
Sbjct: 224 IVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRN 283

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           + ++ ++YN +I    +KG+L +A ++   M+ RG  P L T+N L+ G C +  V +AR
Sbjct: 284 VNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEAR 343

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F       + PD+ SYN L+ GYC++  I EA  LF+++  + L P +VTY++LIDGL
Sbjct: 344 KLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGL 403

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G +  A +L   + + G  P+VITY IM++  CK+  +  A E FN M  +GL P+ 
Sbjct: 404 CKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNV 463

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
            +Y   I G  K     EA  L EEM  +   PD +TYN L+ GLCK G +  A EL   
Sbjct: 464 SSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNV 523

Query: 549 MVGDGFIPDHITYTSIIHA 567
           M   G   D ITY  +  A
Sbjct: 524 MHDGGPPVDVITYNILFDA 542



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/433 (30%), Positives = 216/433 (49%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           SI  L +L+  Y     +     V   +L+ G   +      I+K L  NG   KA E +
Sbjct: 112 SIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFH 171

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             +   G     VTY T+++  CK G  +EA ELL +M+G+   PN V YN+++ G  ++
Sbjct: 172 DSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKD 231

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G + +AR L  D++  G+     +Y  +I G+   G   E   L  +MV R V   + TY
Sbjct: 232 GLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTY 291

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           NILI  LCK G +  A      M+ +   PD++++NTL+ GYC   ++ EA  LFD    
Sbjct: 292 NILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAE 351

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
             + P V +YN LI G C+   ++ A  L   M  + + P+++TY+ +++G CK G +S 
Sbjct: 352 CGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISY 411

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A E F+ +   G  P+   Y   +    K+    +A  L   M  +G  P++ +YN+L++
Sbjct: 412 AWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILIN 471

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           G CK   ++EA  L  +M     +PD +TY  +I    + G +    +LFN M   G   
Sbjct: 472 GYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPV 531

Query: 592 TLVTYTVLIHAHA 604
            ++TY +L  A +
Sbjct: 532 DVITYNILFDAFS 544



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/352 (32%), Positives = 183/352 (51%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K  +  +   + +KM    + P+V   N I+  L  +G   +AR++Y  +   GI P + 
Sbjct: 195 KIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVF 254

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY  ++  FC  G+ +E   LL +M  R  + N  TYN+LI    + G L +A  +   M
Sbjct: 255 TYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLM 314

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           ++ G +    ++N ++ GY     +VEA  L +     G+ P + +YNILI G CK  R+
Sbjct: 315 IERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRI 374

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            +A   F +M  K + P+I++Y++L+ G C+SG I  A+ LF  +      P V+TYN +
Sbjct: 375 DEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIM 434

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           +D LC+   ++ A +L   M  +G+ P+V +Y I++NG CK   +  A   F EM R+ L
Sbjct: 435 LDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNL 494

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
            PD   Y   I G  K G  S A+ L   M   G P D+ITYN+L     K+
Sbjct: 495 VPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSKI 546



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 169/342 (49%), Gaps = 35/342 (10%)

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           I +A  LF  L + + +P+VV +N ++  + +      A  L + M  +GI P ++T +I
Sbjct: 59  IDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSI 118

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           ++N  C +G++  A      +L++G Q +    TT + G    G+  +A    + ++A+G
Sbjct: 119 LINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQG 178

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
           F  D +TY  L++GLCK+G   EA ELL KM G    P+ + Y  I+    + G +   R
Sbjct: 179 FLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEAR 238

Query: 579 DLFNNMLRKGLSPTLVTYTVLIH-----------------------------------AH 603
           DL+++++ +G+ P + TYT LIH                                   A 
Sbjct: 239 DLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDAL 298

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
             +G L  A    + M  +G RP+++T+N L++G C    + +A  LF    E GI P+ 
Sbjct: 299 CKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDV 358

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           ++Y ILI   C      EAL L+ +M  +++ P+  T+S+L+
Sbjct: 359 WSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLI 400



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 46/203 (22%), Positives = 90/203 (44%), Gaps = 35/203 (17%)

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
           ++++A  L  +++    +P  + +  I+ + ++M        L   M  +G++P++VT +
Sbjct: 58  AIDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLS 117

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVI---------------------------- 629
           +LI+ +   G +  AF     +  +G + N I                            
Sbjct: 118 ILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQ 177

Query: 630 -------TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
                  TY  LINGLC++    +A+ L   ME + + PN   Y ++++  C  G   EA
Sbjct: 178 GFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEA 237

Query: 683 LRLYKEMLDREIEPDYCTHSALL 705
             LY +++ R I+PD  T++ L+
Sbjct: 238 RDLYSDVVGRGIDPDVFTYTCLI 260


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 158/524 (30%), Positives = 259/524 (49%), Gaps = 7/524 (1%)

Query: 182 IYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKP 241
           +  +  + E   LV ++    G  PDV  C ++I+ L   G +  A  V R     G   
Sbjct: 53  LIARDDLAEAARLV-DRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAV 111

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
            +  YNT++  +C+ G++  A  L+  M     +P+  TY  +I G    G + +A  L+
Sbjct: 112 DVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLL 168

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
            DML  G + S  +Y  ++    +     +A+ + +EM  +G  P + TYN++I G+C+ 
Sbjct: 169 DDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCRE 228

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           GRV DAR     +      PD +SY T+L G C +    +   LF E+  +N +P  VT+
Sbjct: 229 GRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTF 288

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           + L+   CR G +E A Q+ E M   G   +     I++N  CK G +  A +F N M  
Sbjct: 289 DMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGS 348

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
            G  PD  +YTT + G  +     +A  L +EM+ K  PP+ +T+N  +  LC+ G +E+
Sbjct: 349 YGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQ 408

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A  L+ +M   G   + +TY ++++     G +    +LF +M  K   P  +TYT L+ 
Sbjct: 409 ATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLT 465

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
                 RL+ A    +EM  K   PNV+T+N L++  C+   +D+A  L   M E G  P
Sbjct: 466 GLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTP 525

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           N  TY  L++   N  N +EAL L   ++   + PD  T+S+++
Sbjct: 526 NLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSII 569



 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 165/524 (31%), Positives = 247/524 (47%), Gaps = 38/524 (7%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           PD      II+ L D G   +A  +   M   G +PS+VTY  +L++ CK     +A+E+
Sbjct: 143 PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEV 202

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG--- 322
           L EM+ +GC+PN VTYNV+I G  R G ++ AR  +  +   G +    SY  ++ G   
Sbjct: 203 LDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCA 262

Query: 323 --------------------------------YSEKGLLVEALNLEEEMVTRGVAPTLAT 350
                                           +   G++  A+ + E+M   G A     
Sbjct: 263 AKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTL 322

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
            NI+I  +CK GRV DA      M      PD ISY T+L G CR+    +A  L  E+ 
Sbjct: 323 CNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMV 382

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
            +N  P  VT+NT I  LC+ G +E A  L E M   G   +++TY  +VNG C  G + 
Sbjct: 383 RKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVD 442

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            A E F  M  K   P+   YTT + G         A  L  EML K   P+++T+NVLV
Sbjct: 443 SALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLV 499

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
              C+ G ++EA EL+ +M+  G  P+ ITY +++       +     +L + ++  G+S
Sbjct: 500 SFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVS 559

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           P +VTY+ +I   +   R+E A   F  +Q  G+RP  + YN ++  LC+    D A   
Sbjct: 560 PDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDF 619

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           F  M   G +PN+ TY  LI    N    +E   L +E+  R +
Sbjct: 620 FAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 250/512 (48%), Gaps = 7/512 (1%)

Query: 213 RIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR 272
           R+ +++  +  +  AR V R     G  P +     ++ + C+ G   +A  +L   +  
Sbjct: 49  RLRRLIARDDLAEAARLVDRATSR-GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERS 107

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA 332
           G + +   YN L+ G+ R G+L+ AR LI  M    +   A++Y PII G  ++G + EA
Sbjct: 108 GTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEA 164

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
           L+L ++M+ RG  P++ TY +L+  +CK      A     EM  K   P+I++YN ++ G
Sbjct: 165 LSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIING 224

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
            CR G + +A    + L S    P  V+Y T++ GLC     E  ++L   M+ +  +P+
Sbjct: 225 MCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPN 284

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
            +T+ ++V   C+ G +  A +   +M   G   +       I    K G   +A++   
Sbjct: 285 EVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLN 344

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
            M + G  PD I+Y  ++ GLC+    E+A ELL++MV     P+ +T+ + I    + G
Sbjct: 345 NMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKG 404

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
            + +   L   M   G    +VTY  L++    +GR++ A   F  M  K   PN ITY 
Sbjct: 405 LIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYT 461

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
            L+ GLC   R+D A  L  +M ++   PN  T+ +L++  C  G   EA+ L ++M++ 
Sbjct: 462 TLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEH 521

Query: 693 EIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
              P+  T++ LL    +      A+E L  L
Sbjct: 522 GCTPNLITYNTLLDGITNDCNSEEALELLHGL 553



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 143/478 (29%), Positives = 224/478 (46%), Gaps = 6/478 (1%)

Query: 247 NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
           N  L       ++ EA  L+     RG +P+      LI    R G    A  ++R   +
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
            G  V   +YN ++ GY   G L  A  L   M    VAP   TY  +I GLC  GRV +
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGE 163

Query: 367 ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
           A     +ML +   P +++Y  LL   C+S   G+A  + DE+R++   P +VTYN +I+
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223

Query: 427 GLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
           G+CR G ++ A++    + + G  PD ++YT ++ G C         E F EM+ K   P
Sbjct: 224 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMP 283

Query: 487 DRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
           +   +   +    + G    A ++ E+M   G   +    N++++ +CK G +++A + L
Sbjct: 284 NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFL 343

Query: 547 RKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAAR 606
             M   G  PD I+YT+++            ++L   M+RK   P  VT+   I     +
Sbjct: 344 NNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQK 403

Query: 607 GRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
           G +E A M   +M   G   N++TYNAL+NG C   R+D A  LF  M  +   PN  TY
Sbjct: 404 GLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITY 460

Query: 667 TILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           T L+   CNA     A  L  EML ++  P+  T + L+     K     A+E +E +
Sbjct: 461 TTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQM 518



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 165/345 (47%), Gaps = 3/345 (0%)

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           PD+     L+   CR G   +A  +            V  YNTL+ G CRYG L+ A++L
Sbjct: 76  PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRL 135

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
             +M    + PD  TYT ++ G C  G +  A    ++ML +G QP    YT  +    K
Sbjct: 136 IASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCK 192

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
                +A  + +EM AKG  P+++TYNV+++G+C+ G +++A E L ++   GF PD ++
Sbjct: 193 STGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVS 252

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           YT+++             +LF  M+ K   P  VT+ +L+      G +E A     +M 
Sbjct: 253 YTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMS 312

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
             G   N    N +IN +C+  R+D A+    +M   G  P+  +YT ++   C A  W+
Sbjct: 313 GHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWE 372

Query: 681 EALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
           +A  L KEM+ +   P+  T +  +     K     A   +E ++
Sbjct: 373 DAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS 417


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 151/515 (29%), Positives = 268/515 (52%), Gaps = 3/515 (0%)

Query: 194 LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG-EFGI-KPSIVTYNTMLD 251
           ++  +M   G +PD  +   ++K L D+  S +A ++ RMM  E G+  P +VTYNT++ 
Sbjct: 65  VLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIH 124

Query: 252 SFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKV 311
            F KEG++ +A  L  EM  +G  P+ VT+N +I    +   ++ A  L+R M+  G+  
Sbjct: 125 GFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPP 184

Query: 312 SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRF 371
           +  +Y  +I GYS  G   EA  +  EM  RG+ P + ++N  +  LCK GR  +A   F
Sbjct: 185 NKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIF 244

Query: 372 FEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY 431
           + M  K   P+I++Y  LL+GY   G   +    F+ ++   +V   + +  LID   + 
Sbjct: 245 YSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKR 304

Query: 432 GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAY 491
           G ++ A  +   M  QG+ PDV TY+ +++  C+MG L+ A + FN+M+  G+QP+   Y
Sbjct: 305 GMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVY 364

Query: 492 TTQIAGELKLGDTSEAYRLQEEMLAKGFP-PDLITYNVLVHGLCKLGSLEEANELLRKMV 550
            + I G    GD  +A  L  EM+  G P P++  +N +VH +CK G + +A+ +   + 
Sbjct: 365 HSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVK 424

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
             G   D I + ++I     +G++ +   + + M+  G+ P   TY  L++ +   GR++
Sbjct: 425 DIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRID 484

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
                F EM  K I+P  +TYN +++GL R  R   A  +  +M   G   +  TY I++
Sbjct: 485 DGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIIL 544

Query: 671 NENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
              C      EA+ +++++    ++ +  T + ++
Sbjct: 545 KGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMI 579



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 144/548 (26%), Positives = 266/548 (48%), Gaps = 11/548 (2%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K+  + +   ++++M++ G +PDV   N II  L        A  + R M + G+ P+
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            VTY +M+  +   G  +EA ++  EM GRG  P+ V++N  +    ++G  ++A  +  
Sbjct: 186 KVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFY 245

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M   G + +  +Y  ++ GY+ +G   + ++    M   G+      + ILI    K G
Sbjct: 246 SMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRG 305

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            + +A     EM  + + PD+ +Y+TL+   CR G + +A   F+++    + P  V Y+
Sbjct: 306 MMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYH 365

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGI-LPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           +LI G C +GDL  A++L   M+N GI  P++  +  +V+  CK G +  A   F+ +  
Sbjct: 366 SLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKD 425

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
            G + D   + T I G   +G+  +A+ + + M++ G  PD  TYN LV+G  K G +++
Sbjct: 426 IGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDD 485

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
              L R+M      P  +TY  I+      G     + + + M+  G + +L TY +++ 
Sbjct: 486 GLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILK 545

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
                   + A + F ++    ++ N+ T N +IN +  ++R ++A  LF  + + G++P
Sbjct: 546 GLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVP 605

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQ-----LDKDYKVH 716
           N  TY I+I      G+ +EA  ++  M     E   C   + LL       L+K   V 
Sbjct: 606 NASTYGIMIRNLLKEGSVEEADNMFSSM-----EKSGCAPCSRLLNDTIRTLLEKGEIVK 660

Query: 717 AVEYLESL 724
           A  Y+  +
Sbjct: 661 AGNYMSKV 668



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 142/508 (27%), Positives = 229/508 (45%), Gaps = 74/508 (14%)

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII-CGYSEKGLLV 330
           R   P   TY V++ G  R    E        +L+ GLK    + N ++ C    K    
Sbjct: 2   RVAPPTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDD 61

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI--PDIISYNT 388
               L   M   G  P   +Y I++  LC   R   A      M ++  +  PD+++YNT
Sbjct: 62  AVKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNT 121

Query: 389 LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
           +++G+ + G IG+A  L+ E+  +  VP VVT+N++I+ LC+   ++ A+ L   M++ G
Sbjct: 122 VIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNG 181

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
           + P+ +TYT M++G   +G    A + F EM  +GL PD  ++ + +    K G + EA 
Sbjct: 182 VPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAA 241

Query: 509 RLQEEMLAKGFPPDLITYNVLVHG-----------------------------------L 533
            +   M AKG  P+++TY +L+HG                                    
Sbjct: 242 EIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAY 301

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
            K G ++EA  +L +M G G  PD  TY+++I A   MG L    D FN M+  G+ P  
Sbjct: 302 AKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNT 361

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGI-RPNVITYNALINGLCRLRRIDQAYGLF- 651
           V Y  LI      G L  A     EM   GI RPN+  +N++++ +C+  R+  A+ +F 
Sbjct: 362 VVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFD 421

Query: 652 -----------------ID-----------------MEEEGILPNKYTYTILINENCNAG 677
                            ID                 M   GI P+ +TY  L+N    +G
Sbjct: 422 LVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSG 481

Query: 678 NWQEALRLYKEMLDREIEPDYCTHSALL 705
              + L L++EM D++I+P   T++ +L
Sbjct: 482 RIDDGLNLFREMSDKKIKPTTVTYNIIL 509



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 135/471 (28%), Positives = 227/471 (48%), Gaps = 36/471 (7%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTY--- 246
           E+   +F +M   GL+PD+ + N  +  L  +G S +A E++  M   G +P+IVTY   
Sbjct: 203 EEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGIL 262

Query: 247 -----------------NTM---------------LDSFCKEGEMQEALELLWEMQGRGC 274
                            NTM               +D++ K G M EA+ +L EMQG+G 
Sbjct: 263 LHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGL 322

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
           SP+  TY+ LI+   R G L  A      M+  G++ +   Y+ +I G+   G LV+A  
Sbjct: 323 SPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKE 382

Query: 335 LEEEMVTRGVA-PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
           L  EM+  G+  P +A +N +++ +CK GRV DA H F  +       DII +NTL+ GY
Sbjct: 383 LVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGY 442

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
           C  G +G+AF + D + S  + P   TYNTL++G  + G ++    L   M ++ I P  
Sbjct: 443 CLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTT 502

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
           +TY I+++G  + G    A++  +EM+  G       Y   + G  +   T EA  + ++
Sbjct: 503 VTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQK 562

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           +       ++ T N +++ +  +   EEA +L   +   G +P+  TY  +I   L+ G 
Sbjct: 563 LCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGS 622

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
           +    ++F++M + G +P        I     +G +  A  Y S++  K I
Sbjct: 623 VEEADNMFSSMEKSGCAPCSRLLNDTIRTLLEKGEIVKAGNYMSKVDGKSI 673



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/401 (25%), Positives = 190/401 (47%), Gaps = 5/401 (1%)

Query: 153 VNMHGILDVLIGGGL-SSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNC 211
            +M    + + G G+ ++C+   +  +L+  Y K+ M+++ +L+ ++M   GL PDV   
Sbjct: 273 ADMMSFFNTMKGDGIVANCL---VFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTY 329

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
           + +I  L   G    A + +  M   G++P+ V Y++++  FC  G++ +A EL++EM  
Sbjct: 330 STLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMN 389

Query: 272 RGCS-PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLV 330
            G   PN   +N ++    + G +  A  +   +  +G +     +N +I GY   G + 
Sbjct: 390 NGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMG 449

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
           +A ++ + M++ G+ P   TYN L+ G  K GR+ D  + F EM  K + P  ++YN +L
Sbjct: 450 KAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIIL 509

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
            G  R+G    A  +  E+       ++ TYN ++ GLCR    + A  + + +    + 
Sbjct: 510 DGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVK 569

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
            ++ T   M+N    +     A++ F+ +   GL P+   Y   I   LK G   EA  +
Sbjct: 570 FNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNM 629

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
              M   G  P     N  +  L + G + +A   + K+ G
Sbjct: 630 FSSMEKSGCAPCSRLLNDTIRTLLEKGEIVKAGNYMSKVDG 670



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 186/380 (48%), Gaps = 16/380 (4%)

Query: 108 LRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGL 167
           + FF  ++   G+  +  VF  +++   + G++  A              IL  + G GL
Sbjct: 276 MSFFNTMKGD-GIVANCLVFTILIDAYAKRGMMDEAML------------ILSEMQGQGL 322

Query: 168 SSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKA 227
           S    +     L+    +   +   +  FN+M+  G+ P+    + +I+    +G  VKA
Sbjct: 323 SP--DVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKA 380

Query: 228 RE-VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           +E VY MM     +P+I  +N+++ S CKEG + +A  +   ++  G   + + +N LI 
Sbjct: 381 KELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLID 440

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G+   GE+ +A  ++  M+  G+     +YN ++ GY + G + + LNL  EM  + + P
Sbjct: 441 GYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKP 500

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
           T  TYNI++ GL + GR   A+    EM+       + +YN +L G CR+    EA ++F
Sbjct: 501 TTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMF 560

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
            +L + N+   + T NT+I+ +      E A+ L   + + G++P+  TY IM+    K 
Sbjct: 561 QKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKE 620

Query: 467 GNLSMAREFFNEMLRKGLQP 486
           G++  A   F+ M + G  P
Sbjct: 621 GSVEEADNMFSSMEKSGCAP 640


>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
          Length = 987

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 195/702 (27%), Positives = 311/702 (44%), Gaps = 95/702 (13%)

Query: 79  VSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESG 138
           V+D F+A VS  +            P  AL FF WV  +PG +        +L++L    
Sbjct: 53  VADLFRAPVSPLD------------PATALAFFEWVARRPGFRHTAASHAALLQLLARRR 100

Query: 139 LLRSAYWVVETVVCVN---------MHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMV 189
              +   +V +++  +         +  I  +   GG    +S K  +L L    +  M 
Sbjct: 101 APANYDKLVLSMISCSGTAEDVREAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMT 160

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           E    +++ +++ GLLPD    N +I      G    A   + ++ E G++    T N +
Sbjct: 161 EYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNAL 220

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           L  +C+  ++++A  LL  M   GC  N  +Y +LI G      + +A  L+  M++ G 
Sbjct: 221 LLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGC 280

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
            ++ H Y  +I G  ++G + +A  L +EM  RGV P++ TYN +I G CK GR+ DA  
Sbjct: 281 SLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALG 340

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
               M +    PD  +YN+L+YG C  G + EA  L +   +R   PTV+T+  LI+G C
Sbjct: 341 IKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYC 399

Query: 430 RYGDLEVAQQLKENMINQ-----------------------------------GILPDVI 454
           +   ++ A ++K NMI+                                    G+ P+V+
Sbjct: 400 KAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVV 459

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF------------------------- 489
            YT +++G CK+G +  A E F  M  +G  P+ +                         
Sbjct: 460 IYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKM 519

Query: 490 ----------AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
                     AYTT I G+ K  +   A+RL E M   G  PD   YNVL   LCK G  
Sbjct: 520 QEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRA 579

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           EEA   L   V  G +   +TYTS++    + G+      L   M+ +G    L TY+VL
Sbjct: 580 EEAYSFL---VRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVL 636

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           + A   + +L  A     +M V G++ N++ Y  +I+ + +  + D A  LF +M   G 
Sbjct: 637 LQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGH 696

Query: 660 LPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
            P+  TYT+ I+  C  G  +EA  L  EM    + PD  T+
Sbjct: 697 KPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTY 738



 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 167/572 (29%), Positives = 268/572 (46%), Gaps = 50/572 (8%)

Query: 182 IYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKP 241
           +Y  + + E  +LVF  M+++G   ++     +IK L   G    AR +   M   G+ P
Sbjct: 259 LYEARCVREALVLVF-MMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVP 317

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
           S+ TYN M+D +CK G M++AL +   M+  GC+P+  TYN LI G    G+L++A  L+
Sbjct: 318 SVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELL 376

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
              +  G   +  ++  +I GY +   + +AL ++  M++      L  Y +LI  L K 
Sbjct: 377 NGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKK 436

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
            R+ +A+    EM    + P+++ Y +++ GYC+ G +G A  +F  +      P   TY
Sbjct: 437 CRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTY 496

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
            +LI GL +   L  A  L   M   GI P VI YT ++ G CK      A   F  M +
Sbjct: 497 GSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEK 556

Query: 482 KGLQPD--------------------------------RFAYTTQIAGELKLGDTSEAYR 509
            GL PD                                +  YT+ + G  K G+T  A  
Sbjct: 557 NGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAV 616

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           L E+M+ +G   DL TY+VL+  LCK   L EA  +L +M   G   + + YT II   +
Sbjct: 617 LIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMI 676

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
           + G     + LFN M+  G  P+  TYTV I ++   G++E A     EM+  G+ P+V+
Sbjct: 677 KEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVV 736

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN-------------ENCNA 676
           TY+  ING   +  +D+A+     M +    PN +TY +L+              +    
Sbjct: 737 TYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGM 796

Query: 677 GNWQE---ALRLYKEMLDREIEPDYCTHSALL 705
            NW E     +L + M+   + P   T+S+++
Sbjct: 797 WNWIELNTVWQLLERMMKHGLNPTVVTYSSII 828



 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 156/547 (28%), Positives = 261/547 (47%), Gaps = 21/547 (3%)

Query: 162 LIGGGLSSCVSIKILDLLLLI--YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLR 219
           L+ G ++   +  ++    LI  Y K   ++  L V + M+ +    D++    +I VL 
Sbjct: 375 LLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLI 434

Query: 220 DNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGV 279
                 +A+E    M   G+ P++V Y +++D +CK G +  ALE+   M+  GC PN  
Sbjct: 435 KKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAW 494

Query: 280 TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
           TY  LI G  ++ +L +A  LI  M + G+     +Y  +I G  +K     A  L E M
Sbjct: 495 TYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMM 554

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
              G+ P    YN+L   LCK GR  +A   +  ++RK V+   ++Y +L+ G+ ++GN 
Sbjct: 555 EKNGLTPDEQAYNVLTDALCKSGRAEEA---YSFLVRKGVVLTKVTYTSLVDGFSKAGNT 611

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
             A +L +++ +      + TY+ L+  LC+   L  A  + + M   G+  +++ YTI+
Sbjct: 612 DFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTII 671

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           ++   K G    A+  FNEM+  G +P    YT  I+   K+G   EA  L  EM   G 
Sbjct: 672 ISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGV 731

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG------- 572
            PD++TY++ ++G   +G ++ A   L++MV     P+  TY  ++   L+M        
Sbjct: 732 TPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYI 791

Query: 573 ---------DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
                    +L     L   M++ GL+PT+VTY+ +I       RLE A +    M  K 
Sbjct: 792 DTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKA 851

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
           I PN   Y  LI   C ++   +      DM E G  P   +Y  LI   C+ G++  A 
Sbjct: 852 ISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAK 911

Query: 684 RLYKEML 690
            L+ ++L
Sbjct: 912 SLFCDLL 918



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 171/667 (25%), Positives = 293/667 (43%), Gaps = 75/667 (11%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSA----YWVVETVVCVNMH------------------ 156
           G +R+E+ +  +++ L E+  +R A    + +V+    +N+H                  
Sbjct: 244 GCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDA 303

Query: 157 -GILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRII 215
            G+LD +   G+    S+   + ++  Y K   ++  L +   M +NG  PD    N +I
Sbjct: 304 RGLLDEMPLRGVVP--SVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLI 361

Query: 216 KVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCS 275
             L       +A E+       G  P+++T+  +++ +CK   + +AL +   M    C 
Sbjct: 362 YGLCGGKLD-EAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCK 420

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
            +   Y VLI    +   L++A+  + +M   GL  +   Y  II GY + G++  AL +
Sbjct: 421 LDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEV 480

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
            + M   G  P   TY  LIYGL +  ++  A     +M    + P +I+Y TL+ G C+
Sbjct: 481 FKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCK 540

Query: 396 SGNIGEAFLLFDELRSRNLVP--------------------------------TVVTYNT 423
                 AF LF+ +    L P                                T VTY +
Sbjct: 541 KHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTS 600

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           L+DG  + G+ + A  L E M+N+G   D+ TY++++   CK   L+ A    ++M   G
Sbjct: 601 LVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSG 660

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           ++ +  AYT  I+  +K G    A  L  EM++ G  P   TY V +   CK+G +EEA 
Sbjct: 661 VKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAE 720

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL---- 599
            L+ +M  DG  PD +TY   I+    MG + R       M+     P   TY +L    
Sbjct: 721 HLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHF 780

Query: 600 -----IHAHAARG-------RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
                I+AH            L   +     M   G+ P V+TY+++I G C+  R+++A
Sbjct: 781 LKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEA 840

Query: 648 YGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLK 707
             L   M  + I PN+  YT+LI   C+   + + +    +M++   +P   ++  L++ 
Sbjct: 841 CVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVG 900

Query: 708 QLDK-DY 713
             D+ DY
Sbjct: 901 LCDEGDY 907



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 136/506 (26%), Positives = 224/506 (44%), Gaps = 19/506 (3%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K  MV   L VF  M   G  P+      +I  L  +    KA  +   M E GI P 
Sbjct: 468 YCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPG 527

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           ++ Y T++   CK+ E   A  L   M+  G +P+   YNVL     ++G  E+A     
Sbjct: 528 VIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSF-- 585

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            +++ G+ ++  +Y  ++ G+S+ G    A  L E+MV  G    L TY++L+  LCK  
Sbjct: 586 -LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQK 644

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           ++++A     +M    V  +I++Y  ++    + G    A  LF+E+ S    P+  TY 
Sbjct: 645 KLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYT 704

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
             I   C+ G +E A+ L   M   G+ PDV+TY I +NG   MG +  A      M+  
Sbjct: 705 VFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDA 764

Query: 483 GLQPDRFAYTTQIAGELKLG-------DTS---------EAYRLQEEMLAKGFPPDLITY 526
             +P+ + Y   +   LK+        DTS           ++L E M+  G  P ++TY
Sbjct: 765 SCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTY 824

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           + ++ G CK   LEEA  LL  M+G    P+   YT +I    ++    +      +M+ 
Sbjct: 825 SSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIE 884

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
            G  P L +Y  LI      G  + A   F ++       N + +  L +GL +   +D 
Sbjct: 885 FGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDF 944

Query: 647 AYGLFIDMEEEGILPNKYTYTILINE 672
              L   M+      +  +Y++L + 
Sbjct: 945 CSQLLAAMDNRHCRIDSESYSMLTDS 970



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 113/262 (43%), Gaps = 16/262 (6%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K   +E+   +  +M R+G+ PDV   +  I      G+  +A    + M +   +P+
Sbjct: 710 YCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPN 769

Query: 243 IVTYNTMLDSFCKEG----------------EMQEALELLWEMQGRGCSPNGVTYNVLIT 286
             TY  +L  F K                  E+    +LL  M   G +P  VTY+ +I 
Sbjct: 770 CWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIA 829

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           GF +   LE+A  L+  ML   +  +   Y  +I    +  L  + ++   +M+  G  P
Sbjct: 830 GFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQP 889

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
            L +Y+ LI GLC  G    A+  F ++L  +   + +++  L  G  ++G++     L 
Sbjct: 890 QLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLL 949

Query: 407 DELRSRNLVPTVVTYNTLIDGL 428
             + +R+      +Y+ L D +
Sbjct: 950 AAMDNRHCRIDSESYSMLTDSI 971


>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
 gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
 gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
          Length = 913

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 158/506 (31%), Positives = 257/506 (50%), Gaps = 5/506 (0%)

Query: 201 RNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR-MMGEFGIKPSIVTYNTMLDSFCKEGEM 259
           R G+ P  ++ N ++ VL        A  +YR M+    + P+  T+     + C+ G  
Sbjct: 132 RFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRA 191

Query: 260 QEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI 319
            EAL LL  M   GC P+ V Y  +I      G + +A  L+ +ML +G     ++++ +
Sbjct: 192 DEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDV 251

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           + G    G + EA  L + M+T+G  P + TY  L+ GLC+  +  +AR     ML +  
Sbjct: 252 VRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEAR----AMLGRVP 307

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
             +++ +NT++ G    G + EA  L++ +  +   P   TY+ L+ GLC+ G +  A +
Sbjct: 308 ELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVR 367

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           L   M  +G  P+V+TYTI+++  CK G     R    EM  KGL  +   Y   I    
Sbjct: 368 LLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALC 427

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           K G   EA  L +EM ++G  PD+ +YN +++ LC    +EEA  +   ++ +G + + I
Sbjct: 428 KDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGI 487

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
           TY +IIHA L  G  +    L   M+  G S  +V+Y  LI A    G ++ + +   EM
Sbjct: 488 TYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEM 547

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
             KGI+PN ++YN LI+ LC+ RR+  A  L   M  +G+ P+  TY  LIN  C  G  
Sbjct: 548 AEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWM 607

Query: 680 QEALRLYKEMLDREIEPDYCTHSALL 705
             AL L +++ +  + PD  T++ L+
Sbjct: 608 HAALNLLEKLHNENVHPDIITYNILI 633



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 156/489 (31%), Positives = 244/489 (49%), Gaps = 5/489 (1%)

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG-CSPNGVTYNVLITGFSRNGELE 295
           FG++PS  +YN +L    +     +AL L   M  R    P   T+ V      R G  +
Sbjct: 133 FGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRAD 192

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
           +A  L+R M + G    A  Y  +I    ++G + EA  L  EM+  G A  + T++ ++
Sbjct: 193 EALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVV 252

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
            G+C  GRV +A      M+ K  +P +++Y  LL G CR     EA  +   +   N  
Sbjct: 253 RGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELN-- 310

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
             VV +NT+I G    G L  A +L E M  +G  PD  TY+I+++G CK+G +  A   
Sbjct: 311 --VVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRL 368

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
             EM +KG  P+   YT  +    K G   +   L EEM AKG   +   YN +++ LCK
Sbjct: 369 LREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCK 428

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
            G ++EA  L+++M   G  PD  +Y +II+       +     +F N+L +G+    +T
Sbjct: 429 DGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGIT 488

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           Y  +IHA    GR + A     EM + G   +V++YN LI  +C+   +D++  L  +M 
Sbjct: 489 YNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMA 548

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKV 715
           E+GI PN  +Y ILI+E C     ++AL L K+ML++ + PD  T++ L+       +  
Sbjct: 549 EKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMH 608

Query: 716 HAVEYLESL 724
            A+  LE L
Sbjct: 609 AALNLLEKL 617



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 138/487 (28%), Positives = 249/487 (51%), Gaps = 7/487 (1%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
            ++ L +   M R+G +PD      +I  L D G   +A  +   M   G    + T++ 
Sbjct: 191 ADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDD 250

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++   C  G ++EA  L+  M  +GC P  +TY  L+ G  R  + ++AR ++  + +L 
Sbjct: 251 VVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELN 310

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           + +    +N +I G   +G L EA  L E M  +G  P   TY+IL++GLCK GR+  A 
Sbjct: 311 VVL----FNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAV 366

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               EM +K   P++++Y  +L+ +C++G   +   L +E+ ++ L      YN +I  L
Sbjct: 367 RLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYAL 426

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G ++ A  L + M +QG  PD+ +Y  ++   C    +  A   F  +L +G+  + 
Sbjct: 427 CKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANG 486

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             Y T I   L+ G   +A RL +EM+  G   D+++YN L+  +CK G+++ +  LL +
Sbjct: 487 ITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEE 546

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M   G  P++++Y  +I    +   +R   +L   ML +GL+P +VTY  LI+     G 
Sbjct: 547 MAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGW 606

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP--NKYTY 666
           +  A     ++  + + P++ITYN LI+  C++R +D A  + ++     + P  ++   
Sbjct: 607 MHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDA-AMLLNRAMAAVCPVGDRRIM 665

Query: 667 TILINEN 673
            IL ++N
Sbjct: 666 QILPDKN 672



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 161/316 (50%), Gaps = 1/316 (0%)

Query: 166 GLSSC-VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS 224
           GL  C        +L+    K   +   + +  +M + G  P+V     ++     NG  
Sbjct: 338 GLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMW 397

Query: 225 VKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVL 284
              R +   M   G+  +   YN M+ + CK+G M EA+ L+ EM+ +GC+P+  +YN +
Sbjct: 398 DDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTI 457

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           I     N ++E+A  +  ++L+ G+  +  +YN II      G   +A+ L +EM+  G 
Sbjct: 458 IYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGC 517

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
           +  + +YN LI  +CK G V  +     EM  K + P+ +SYN L+   C+   + +A  
Sbjct: 518 SLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALE 577

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
           L  ++ ++ L P +VTYNTLI+GLC+ G +  A  L E + N+ + PD+ITY I+++  C
Sbjct: 578 LSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHC 637

Query: 465 KMGNLSMAREFFNEML 480
           K+  L  A    N  +
Sbjct: 638 KVRLLDDAAMLLNRAM 653



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 16/169 (9%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGI-LDVLIGGGLSSCVSIKILD 177
           GV  +   + TI+  L+  G  + A  + + ++   +HG  LDV+   GL     IK + 
Sbjct: 481 GVVANGITYNTIIHALLRDGRWQDAVRLAKEMI---LHGCSLDVVSYNGL-----IKAM- 531

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
                  K   V++ L++  +M   G+ P+  + N +I  L        A E+ + M   
Sbjct: 532 ------CKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQ 585

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           G+ P IVTYNT+++  CK G M  AL LL ++      P+ +TYN+LI+
Sbjct: 586 GLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILIS 634


>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
          Length = 748

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 144/489 (29%), Positives = 258/489 (52%), Gaps = 1/489 (0%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G+ P + +YNT++D F KEGE+ +A EL ++M  +  SP+ VTYN LI G  +  E+ ++
Sbjct: 152 GLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKS 211

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             ++  M+  G++ +  +YN +I GYS  G+  E++ + +EM + G+ P +   N  I+ 
Sbjct: 212 ERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHA 271

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           LC+  R+ +A+  F  M+ K   P+IISY+TLL+GY   G       L + + S+ +VP 
Sbjct: 272 LCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPN 331

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
              +N LI+   R G ++ A  + E+M N+G++PD +T+  +++  C++G L  A   FN
Sbjct: 332 HRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFN 391

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY-NVLVHGLCKL 536
            M+  G+ P    Y   I G    G+  +A  L  EM+ K  PP  + Y + +++ L K 
Sbjct: 392 HMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKE 451

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G + E  +++  MV  G  P+ +T+ S++     +G++     L + M   G+ P    Y
Sbjct: 452 GRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIY 511

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
             L+  +   GR++ A   F +M  KG++P  + YN +++GL + RR   A  +F +M E
Sbjct: 512 GTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIE 571

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVH 716
            G   +  TY +++   C      EA  L +++    ++ D  T + ++   L    +  
Sbjct: 572 SGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQE 631

Query: 717 AVEYLESLT 725
           A E   +++
Sbjct: 632 AKELFAAIS 640



 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 159/542 (29%), Positives = 273/542 (50%), Gaps = 2/542 (0%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           +I   ++L+  Y +    E  L VF ++LR GL PDV + N +I      G   KA E++
Sbjct: 121 TIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELF 180

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M E  + P +VTYN+++D  CK  EM ++  +L +M   G  PN  TYN LI G+S  
Sbjct: 181 YKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTA 240

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G  +++  + ++M   GL     + N  I        + EA ++ + MV +G  P + +Y
Sbjct: 241 GMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISY 300

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           + L++G    G  ++       M+ K ++P+   +N L+  Y R G + +A L+F+++++
Sbjct: 301 STLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQN 360

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           + ++P  VT+ T+I  LCR G L+ A     +M++ G+ P    Y  ++ G C  G L  
Sbjct: 361 KGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVK 420

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGEL-KLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
           A+E  +EM+ K + P    Y + I   L K G  +E   + + M+  G  P+++T+N L+
Sbjct: 421 AKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLM 480

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
            G C +G++EEA  LL  M   G  P+   Y +++    + G +     +F +ML KG+ 
Sbjct: 481 EGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVK 540

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           PT V Y +++H      R   A   F EM   G   ++ TY  ++ GLCR    D+A  L
Sbjct: 541 PTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANML 600

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLD 710
              +    +  +  T+ I+I+     G  QEA  L+  +    + P   T++ L++  L 
Sbjct: 601 LEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYN-LMISNLI 659

Query: 711 KD 712
           K+
Sbjct: 660 KE 661



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 136/459 (29%), Positives = 237/459 (51%), Gaps = 8/459 (1%)

Query: 254 CKEGEMQEALELLWEMQGRGC------SPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
           C +G    A+EL   M    C      +P   TYN+LI  + R    E A  +   +L+ 
Sbjct: 93  CSDGPAL-AVELFKRMDRWACPHAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRT 151

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           GL     SYN +I G+S++G + +A  L  +M+ + V+P + TYN LI GLCK   +  +
Sbjct: 152 GLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKS 211

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
                +M+   + P+  +YN+L+YGY  +G   E+  +F E+ S  L+P VV  N+ I  
Sbjct: 212 ERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHA 271

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           LCR+  ++ A+ + ++M+ +G  P++I+Y+ +++G    G  +      N M+ KG+ P+
Sbjct: 272 LCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPN 331

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              +   I    + G   +A  + E+M  KG  PD +T+  ++  LC++G L++A     
Sbjct: 332 HRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFN 391

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY-TVLIHAHAAR 606
            MV  G  P    Y  +I      G+L + ++L + M+ K + P  V Y + +I+     
Sbjct: 392 HMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKE 451

Query: 607 GRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
           GR+         M   G RPNV+T+N+L+ G C +  +++A+ L   M   GI PN Y Y
Sbjct: 452 GRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIY 511

Query: 667 TILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             L++  C  G   +AL ++++ML + ++P    ++ +L
Sbjct: 512 GTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIIL 550



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 167/638 (26%), Positives = 297/638 (46%), Gaps = 33/638 (5%)

Query: 76  NRWVSDHFQA---VVSDPELLVRVLNRIREKPRIALRFF-RWVETQPGVKRDEFVFCTIL 131
           +RW   H  A    +    +L+    R+  +P +AL  F R + T  G+  D   + T++
Sbjct: 108 DRWACPHAAADAPTIYTYNILIDCYRRM-HRPELALAVFGRLLRT--GLGPDVCSYNTLI 164

Query: 132 EILIESGLLRSAY-----------------------WVVETVVCVNMHGILDVLIGGGLS 168
           +   + G +  AY                        + +T   V    +L+ ++  G+ 
Sbjct: 165 DGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIR 224

Query: 169 SCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR 228
              + K  + L+  Y+   M ++ + VF +M  +GL+P V NCN  I  L  +    +A+
Sbjct: 225 P--NNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAK 282

Query: 229 EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
           +++  M   G KP+I++Y+T+L  +  EG       L+  M  +G  PN   +N+LI  +
Sbjct: 283 DIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAY 342

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
           +R G +++A  +  DM   G+     ++  +I      G L +AL+    MV  GV P+ 
Sbjct: 343 ARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSE 402

Query: 349 ATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISY-NTLLYGYCRSGNIGEAFLLFD 407
           A Y  LI G C  G +  A+    EM+ K++ P  + Y ++++    + G + E   + D
Sbjct: 403 AVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMD 462

Query: 408 ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG 467
            +      P VVT+N+L++G C  G++E A  L + M + GI P+   Y  +V+G CK G
Sbjct: 463 LMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNG 522

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
            +  A   F +ML KG++P    Y   + G  +   T+ A ++  EM+  G    + TY 
Sbjct: 523 RIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYG 582

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
           V++ GLC+    +EAN LL K+       D IT+  +I A L++G  +  ++LF  +   
Sbjct: 583 VVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTY 642

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
           GL PT+ TY ++I         E A   F  ++  G  P+    N ++  L +   + +A
Sbjct: 643 GLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAKA 702

Query: 648 YGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
                 ++E  +     T ++L +     G  +E ++L
Sbjct: 703 SNYLSIIDENNLTLEASTISLLASLFSREGKCREHIKL 740



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 106/335 (31%), Positives = 179/335 (53%)

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           P I +YN L+  Y R      A  +F  L    L P V +YNTLIDG  + G+++ A +L
Sbjct: 120 PTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYEL 179

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
              MI Q + PDV+TY  +++G CK   +  +     +M+  G++P+   Y + I G   
Sbjct: 180 FYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYST 239

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
            G   E+ R+ +EM + G  P ++  N  +H LC+   ++EA ++   MV  G  P+ I+
Sbjct: 240 AGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIIS 299

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           Y++++H     G       L N M+ KG+ P    + +LI+A+A  G ++ A + F +MQ
Sbjct: 300 YSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQ 359

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
            KG+ P+ +T+  +I+ LCR+ R+D A   F  M + G+ P++  Y  LI   CN G   
Sbjct: 360 NKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELV 419

Query: 681 EALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKV 715
           +A  L  EM++++I P    + + ++  L K+ +V
Sbjct: 420 KAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRV 454


>gi|296087527|emb|CBI34116.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 173/644 (26%), Positives = 304/644 (47%), Gaps = 82/644 (12%)

Query: 93  LVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIE-------SGLLRSAYW 145
           +V +   ++ +P +A  FF  ++ + G + +   +  ++ +L           LL     
Sbjct: 66  VVEIFYNLKNEPNLAWSFFTQLK-ESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIVG 124

Query: 146 VVETVVCVNMHGILDVL-----IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKML 200
             E+V+  ++  + DVL        G  S V I +LD+L+  Y +  M ++ +    +  
Sbjct: 125 SKESVLGFDITALFDVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTK 184

Query: 201 RNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQ 260
           R G +P + +CN ++  L ++G    A  +YR +   G+ P+  TY   + + C++G  +
Sbjct: 185 RRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFE 244

Query: 261 EALELLWEMQGRGCSPNGVT-----------------------------------YNVLI 285
           EA+++  EM+  G +PN VT                                   Y  +I
Sbjct: 245 EAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVI 304

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            GF    +L++A  +  DM+  G+    + Y  +I  Y + G L++A+ L  +MV+ G+ 
Sbjct: 305 RGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIK 364

Query: 346 PTLAT----------------YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTL 389
             L                  YNI++  LCK G+V +A     EM  + +  D++ Y TL
Sbjct: 365 TNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTL 424

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
           + GYC  G + +A  +F+E++ R + P +VTYN L+ G  R G  + A +L + +  QG+
Sbjct: 425 IAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGL 484

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY- 508
            P+  T+  ++ G C  G +  A  F N +  K L+     Y+  + G  K   T +AY 
Sbjct: 485 KPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLE----NYSAMVDGYCKANFTRKAYE 540

Query: 509 ---RLQEE----MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
              RL ++    MLA    P+ I Y  L+   C+ G ++ A  +   +V  G  PD ITY
Sbjct: 541 LFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITY 600

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
           T +I+    +  LR  RD+FN+M  +G+ P ++TYTV++  H+    L+ A   + EM  
Sbjct: 601 TMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIA 660

Query: 622 KGIRPNVITYNALINGLCRL--RRIDQAY----GLFIDMEEEGI 659
           +G++P+++TY AL+ G C    R  D  +     LFI  +  G+
Sbjct: 661 RGLQPDIVTYTALLPGKCNFGSRHFDNQWLEEPKLFILAQPRGV 704



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 160/339 (47%), Gaps = 16/339 (4%)

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
           I+  + L+  Y R G   EA     + + R  VP +++ N L++ L  +G +++A  +  
Sbjct: 157 ILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYR 216

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
           ++   G+ P+  TY I +   C+ GN   A + F EM   G+ P+    +T I G     
Sbjct: 217 HLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHK 276

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
            +   Y     + A  +P D   Y  ++ G C    L+EA ++   MV +G  PD   Y 
Sbjct: 277 RSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYG 336

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT----------------YTVLIHAHAAR 606
           ++IHA  + G+L +   L N+M+  G+   LV                 Y +++ A    
Sbjct: 337 ALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKL 396

Query: 607 GRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
           G++E A    +EM+ + +  +V+ Y  LI G C   ++  A  +F +M+E GI P+  TY
Sbjct: 397 GKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTY 456

Query: 667 TILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            IL+      G  +EAL L   +  + ++P+  TH+ ++
Sbjct: 457 NILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRII 495



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 90/199 (45%), Gaps = 9/199 (4%)

Query: 507 AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
           A+    ++   GF  ++ TY  L+  LC+     +   LL ++VG          T++  
Sbjct: 80  AWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIVGSKESVLGFDITALF- 138

Query: 567 ASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRP 626
                 D+ R             S  ++   +L+ A+   G  + A     + + +G  P
Sbjct: 139 ------DVLREGGGEVEGEHS--SVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVP 190

Query: 627 NVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLY 686
           ++++ N L+N L    +ID A  ++  ++  G+ PN YTY I I   C  GN++EA+ ++
Sbjct: 191 HIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVF 250

Query: 687 KEMLDREIEPDYCTHSALL 705
           +EM +  + P+  T S  +
Sbjct: 251 REMEEAGVNPNAVTCSTYI 269


>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Brachypodium distachyon]
          Length = 673

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 155/506 (30%), Positives = 253/506 (50%), Gaps = 5/506 (0%)

Query: 201 RNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR-MMGEFGIKPSIVTYNTMLDSFCKEGEM 259
           R  + P  ++ N ++              +YR M+    + P+  T++    + C+ G  
Sbjct: 129 RFAVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGRA 188

Query: 260 QEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI 319
            EAL +L  M   GC P+ V Y  +I      G + +A  L+ +M  +G     +++N I
Sbjct: 189 DEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDI 248

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           + G    G L EA  L + M+ RG  P   TY  L+ GLC   +V +AR     ML +  
Sbjct: 249 VHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEAR----TMLGRVP 304

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
             +++ +NT++      G + EA  L++ + S+   P   TY+ LI GLC+ G L  A +
Sbjct: 305 ELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMK 364

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           L   M ++G  P ++TYTI+++  C+ G     R     M  KGL  +   Y   I    
Sbjct: 365 LLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVC 424

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           K     +A R  +EM ++G+ PD+ TYN +++ LC    +EEA  L   ++ +G + + I
Sbjct: 425 KDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAI 484

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
           TY ++IHA L  G  +    L N+M+  G S  +V+Y  LI A    G ++ + M  SEM
Sbjct: 485 TYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEM 544

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
             KGI+PN ++YN LI+ LC+ RR+  A  L  +M  + + P+  TY  LIN  C  G  
Sbjct: 545 AEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWM 604

Query: 680 QEALRLYKEMLDREIEPDYCTHSALL 705
             AL L +++ + ++  D  T++ L+
Sbjct: 605 HAALNLLEKLHNEDVHADIITYNILI 630



 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 148/489 (30%), Positives = 242/489 (49%), Gaps = 5/489 (1%)

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG-CSPNGVTYNVLITGFSRNGELE 295
           F + PS  +YNT+L +F +     + L L   M  R    P   T+++      R G  +
Sbjct: 130 FAVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGRAD 189

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
           +A  ++R M + G       Y  +I     +G + EA  L +EM   G +  + T+N ++
Sbjct: 190 EALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIV 249

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
           +GLC  GR+ +A      M+ +  +P+ I+Y  LL G C +  + EA  +   +   N  
Sbjct: 250 HGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLGRVPELN-- 307

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
             VV +NT+I      G L+ A +L E M ++G  PD  TY+I+++G CK+G L  A + 
Sbjct: 308 --VVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKL 365

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
             EM  KG  P    YT  +    + G       + E M  KG   +L  YN ++  +CK
Sbjct: 366 LREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCK 425

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
              +++A   +++M   G+ PD  TY +II+       +     LF N+L +G+    +T
Sbjct: 426 DRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAIT 485

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           Y  LIHA    G  + A    ++M + G   ++++YN LI  LCR   +D++  L  +M 
Sbjct: 486 YNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMA 545

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKV 715
           E+GI PN  +Y +LI+E C     ++AL L KEML++E+ PD  T++ L+       +  
Sbjct: 546 EKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMH 605

Query: 716 HAVEYLESL 724
            A+  LE L
Sbjct: 606 AALNLLEKL 614



 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 137/482 (28%), Positives = 236/482 (48%), Gaps = 4/482 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
            ++ L +   M R+G +PD      +I  L   G   +A  +   M   G    + T+N 
Sbjct: 188 ADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFND 247

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++   C  G ++EA  L+  M  RGC PN +TY  L+ G     ++E+AR ++  + +L 
Sbjct: 248 IVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLGRVPELN 307

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           + +    +N +I      G L EA  L E M ++G  P   TY+ILI+GLCK GR+  A 
Sbjct: 308 VVL----FNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAM 363

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               EM  K   P I++Y  LL+ +CR+G       + + +  + L   +  YN +I  +
Sbjct: 364 KLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAV 423

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+   ++ A +  + M +QG  PD+ TY  ++   C    +  A   F  +L +G+  + 
Sbjct: 424 CKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANA 483

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             Y T I   L+ G   +A  L  +M+  G   D+++YN L+  LC+ G+++ +  LL +
Sbjct: 484 ITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSE 543

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M   G  P++++Y  +I    +   +R   +L   ML + L+P +VTY  LI+     G 
Sbjct: 544 MAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGW 603

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           +  A     ++  + +  ++ITYN LI+  C+ R +  A  L       GI PN+ T+ I
Sbjct: 604 MHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASMLLNRAVTSGITPNERTWGI 663

Query: 669 LI 670
           ++
Sbjct: 664 MV 665



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 147/277 (53%), Gaps = 2/277 (0%)

Query: 154 NMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNR 213
           N+  +L+V+   GLS  ++++  + ++    K   ++  +    +M   G  PD+   N 
Sbjct: 396 NIRAMLEVMSDKGLS--MNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNT 453

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
           II  L +N    +A  ++  +   G+  + +TYNT++ +  + G  Q+A+ L  +M   G
Sbjct: 454 IIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHG 513

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
           CS + V+YN LI    R+G ++++  L+ +M + G+K +  SYN +I    +   + +AL
Sbjct: 514 CSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDAL 573

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
            L +EM+ + + P + TYN LI GLCK G +  A +   ++  ++V  DII+YN L+  +
Sbjct: 574 ELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWH 633

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
           C++  + +A +L +   +  + P   T+  ++    R
Sbjct: 634 CKARLLHDASMLLNRAVTSGITPNERTWGIMVQNFVR 670



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 97/210 (46%), Gaps = 16/210 (7%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGI-LDVLIGGGLSSCVSIKILD 177
           GV  +   + T++  L+ +G  + A  +   +V   +HG  LD++   GL     IK L 
Sbjct: 478 GVVANAITYNTLIHALLRNGSWQDAISLANDMV---LHGCSLDIVSYNGL-----IKAL- 528

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
                  +   V++ +++ ++M   G+ P+  + N +I  L        A E+ + M   
Sbjct: 529 ------CRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQ 582

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
            + P IVTYNT+++  CK G M  AL LL ++       + +TYN+LI+   +   L  A
Sbjct: 583 ELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDA 642

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKG 327
             L+   +  G+  +  ++  ++  +  K 
Sbjct: 643 SMLLNRAVTSGITPNERTWGIMVQNFVRKS 672


>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 157/498 (31%), Positives = 256/498 (51%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +FN+ML     P     N I+  L        A  + + +   GI   +VT N +++ FC
Sbjct: 56  LFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFC 115

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
             G++  +  +L  +  RG  P+ +T   LI G    GE+++A     D++ L  ++   
Sbjct: 116 HLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRI 175

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           SY  +I G  + G    A+ L   +  R + P +  YNI+I  LCK   V +A + + EM
Sbjct: 176 SYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEM 235

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
             K + P++++Y TL+YG+C  G + EA  L +E++ +N+ P V T++ LID L + G +
Sbjct: 236 NAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKM 295

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A+ +   M+   + PDV+TY  +V+G   +  +  A+  FN M + G+ P   +YT  
Sbjct: 296 KAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIM 355

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I G  K     EA  L EEM  K   P+ IT+N L+ GLCK G +    +L+ KM     
Sbjct: 356 IDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQ 415

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
           + D ITY+S+I A  +   L +   LF  M+ + + P + TYT+LI      GRL++A  
Sbjct: 416 LADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQE 475

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F  + +KG   ++ TY  +I+G C+    D+A  L   ME+ G +PN  T+ I+I    
Sbjct: 476 VFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALF 535

Query: 675 NAGNWQEALRLYKEMLDR 692
                 +A +L +EM+ R
Sbjct: 536 EKDENDKAEKLLREMIAR 553



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 129/362 (35%), Positives = 205/362 (56%), Gaps = 4/362 (1%)

Query: 198 KMLRN----GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
           +++RN     + PDV   N II  L  N    +A  +Y  M    I P++VTY T++  F
Sbjct: 195 QLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGF 254

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           C  G + EA+ LL EM+ +  +P+  T+++LI    + G+++ A+ ++  M+K  +K   
Sbjct: 255 CIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDV 314

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
            +YN ++ GY     +  A  +   M   GV P + +Y I+I GLCK   V +A   F E
Sbjct: 315 VTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEE 374

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M  KNVIP+ I++N+L+ G C+SG I   + L D++R R+ +  V+TY++LID LC+   
Sbjct: 375 MKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCH 434

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           L+ A  L + MI Q I PD+ TYTI+++G CK G L +A+E F  +L KG   D   YT 
Sbjct: 435 LDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTV 494

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            I+G  K G   EA  L  +M   G  P+ IT+++++  L +    ++A +LLR+M+  G
Sbjct: 495 MISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREMIARG 554

Query: 554 FI 555
            +
Sbjct: 555 LL 556



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 124/368 (33%), Positives = 197/368 (53%)

Query: 222 GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY 281
           G +  A ++ R + E  IKP +V YN ++DS CK   + EA  L  EM  +   PN VTY
Sbjct: 188 GETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTY 247

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
             LI GF   G L +A  L+ +M    +    ++++ +I    ++G +  A  +   M+ 
Sbjct: 248 TTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMK 307

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
             V P + TYN L+ G      V  A++ F  M +  V P + SY  ++ G C++  + E
Sbjct: 308 AYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDE 367

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           A  LF+E++ +N++P  +T+N+LIDGLC+ G +     L + M ++  L DVITY+ +++
Sbjct: 368 AISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLID 427

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
             CK  +L  A   F +M+ + +QPD + YT  I G  K G    A  + + +L KG+  
Sbjct: 428 ALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHL 487

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           D+ TY V++ G CK G  +EA  LL KM  +G IP+ IT+  II A  E  +  +   L 
Sbjct: 488 DIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLL 547

Query: 582 NNMLRKGL 589
             M+ +GL
Sbjct: 548 REMIARGL 555



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 220/418 (52%)

Query: 288 FSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPT 347
           ++ + +   A  L   ML +        +N I+    +      A++L + +  +G+   
Sbjct: 44  YNNHNDHNDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSD 103

Query: 348 LATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFD 407
           L T NILI   C  G+++ +      +L++   PD+I+  TL+ G C  G + +A    D
Sbjct: 104 LVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHD 163

Query: 408 ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG 467
           ++ +       ++Y TLI+GLC+ G+ + A QL  N+  + I PDV+ Y I+++  CK  
Sbjct: 164 DVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNK 223

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
            +  A   ++EM  K + P+   YTT I G   +G   EA  L  EM  K   PD+ T++
Sbjct: 224 LVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFS 283

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
           +L+  L K G ++ A  +L  M+     PD +TY S++     + +++  + +FN+M + 
Sbjct: 284 ILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQS 343

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
           G++P + +YT++I        ++ A   F EM+ K + PN IT+N+LI+GLC+  RI   
Sbjct: 344 GVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYV 403

Query: 648 YGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           + L   M +   L +  TY+ LI+  C   +  +A+ L+K+M+ +EI+PD  T++ L+
Sbjct: 404 WDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILI 461



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 118/430 (27%), Positives = 217/430 (50%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V   +L+ G  PDV     +IK L   G   KA + +  +     +   ++Y T+++  C
Sbjct: 126 VLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLC 185

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K GE + A++L+  ++ R   P+ V YN++I    +N  + +A  L  +M    +  +  
Sbjct: 186 KIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVV 245

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +Y  +I G+   G L+EA+ L  EM  + + P + T++ILI  L K G++  A+     M
Sbjct: 246 TYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVM 305

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           ++  V PD+++YN+L+ GY     +  A  +F+ +    + P V +Y  +IDGLC+   +
Sbjct: 306 MKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMV 365

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A  L E M ++ ++P+ IT+  +++G CK G ++   +  ++M  +    D   Y++ 
Sbjct: 366 DEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSL 425

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I    K     +A  L ++M+ +   PD+ TY +L+ GLCK G L+ A E+ + ++  G+
Sbjct: 426 IDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGY 485

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
             D  TYT +I    + G       L + M   G  P  +T+ ++I A   +   + A  
Sbjct: 486 HLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEK 545

Query: 615 YFSEMQVKGI 624
              EM  +G+
Sbjct: 546 LLREMIARGL 555



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 122/262 (46%), Gaps = 35/262 (13%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V+    VFN M ++G+ P V++   +I  L       +A  ++  M    + P+ +T+N+
Sbjct: 330 VKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNS 389

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++D  CK G +    +L+ +M+ R    + +TY+ LI    +N  L+QA  L + M    
Sbjct: 390 LIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKM---- 445

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
                                          +T+ + P + TY ILI GLCK GR+  A+
Sbjct: 446 -------------------------------ITQEIQPDMYTYTILIDGLCKGGRLKIAQ 474

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F  +L K    DI +Y  ++ G+C++G   EA  L  ++     +P  +T++ +I  L
Sbjct: 475 EVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICAL 534

Query: 429 CRYGDLEVAQQLKENMINQGIL 450
               + + A++L   MI +G+L
Sbjct: 535 FEKDENDKAEKLLREMIARGLL 556



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 96/196 (48%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K  MV++ + +F +M    ++P+    N +I  L  +G      ++   M +      ++
Sbjct: 361 KTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVI 420

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY++++D+ CK   + +A+ L  +M  +   P+  TY +LI G  + G L+ A+ + + +
Sbjct: 421 TYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHL 480

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           L  G  +   +Y  +I G+ + GL  EAL L  +M   G  P   T++I+I  L +    
Sbjct: 481 LIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDEN 540

Query: 365 SDARHRFFEMLRKNVI 380
             A     EM+ + ++
Sbjct: 541 DKAEKLLREMIARGLL 556


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 147/467 (31%), Positives = 242/467 (51%)

Query: 198 KMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG 257
           KM   G+ P++ NCN +I      G    A  V+  + + G  P  +T+ T+    C +G
Sbjct: 110 KMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKG 169

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
           ++Q+A     ++   G   + ++Y  LI G  + GE   A  L++ +    ++ +   YN
Sbjct: 170 QIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYN 229

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            II    +  L+ EA +L  EMV++G++P + TY+ LI G C  G++ DA   F +M+ +
Sbjct: 230 TIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILE 289

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
           N+ PD+ ++N L+  +C+ G + E   +FD +  + + P  VTYN+L+DG C   ++  A
Sbjct: 290 NIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKA 349

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
           + +   M   G+ PD+ +Y+IM+NG CK+     A   F EM RK + PD   Y++ I G
Sbjct: 350 KSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDG 409

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
             K G  S A +L ++M  +G PP++ TYN ++  LCK   +++A  LL K    GF PD
Sbjct: 410 LSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPD 469

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
             TY+ +I    + G L   R +F ++L KG +  +  YT++I      G    A    S
Sbjct: 470 ISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLS 529

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
           +M+  G  P+  TY  +I  L +    D A  L  +M   G+  N Y
Sbjct: 530 KMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPLNFY 576



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 150/504 (29%), Positives = 257/504 (50%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V+  + +FN++LR    P     N+I+  L  +        + + M   GIKP++V  N 
Sbjct: 66  VDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 125

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++ FC+ G +  A  +  ++   G  P+ +T+  L  G    G+++QA      ++ LG
Sbjct: 126 LINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALG 185

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
                 SY  +I G  + G    AL+L + +    V P +  YN +I  +CK   V++A 
Sbjct: 186 FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAF 245

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F EM+ K + PD+++Y+ L+ G+C  G + +A  LF+++   N+ P V T+N L++  
Sbjct: 246 DLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAF 305

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G ++  + + + M+ QGI P+ +TY  +++G C +  ++ A+  FN M + G+ PD 
Sbjct: 306 CKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDI 365

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
            +Y+  I G  K+    EA  L +EM  K   PD++TY+ L+ GL K G +  A +L+ +
Sbjct: 366 QSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQ 425

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M   G  P+  TY SI+ A  +   + +   L      KG  P + TY++LI      G+
Sbjct: 426 MHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGK 485

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           LE A   F ++ VKG   +V  Y  +I G C     ++A  L   ME+ G +P+  TY I
Sbjct: 486 LEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEI 545

Query: 669 LINENCNAGNWQEALRLYKEMLDR 692
           +I           A +L +EM+ R
Sbjct: 546 IILSLFKKDENDMAEKLLREMIAR 569



 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 144/472 (30%), Positives = 242/472 (51%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P    +N +L S  K       L L  +M+ RG  PN V  N+LI  F + G +  A  +
Sbjct: 83  PPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSV 142

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
              +LK+G      ++  +  G   KG + +A    +++V  G      +Y  LI+GLCK
Sbjct: 143 FAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCK 202

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G    A      +    V P+++ YNT++   C+   + EAF LF E+ S+ + P VVT
Sbjct: 203 VGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVT 262

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y+ LI G C  G L+ A  L   MI + I PDV T+ I+VN  CK G +   +  F+ M+
Sbjct: 263 YSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMM 322

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           ++G++P+   Y + + G   + + ++A  +   M   G  PD+ +Y+++++G CK+   +
Sbjct: 323 KQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFD 382

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA  L ++M     IPD +TY+S+I    + G +     L + M  +G+ P + TY  ++
Sbjct: 383 EAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSIL 442

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
            A     +++ A    ++ + KG +P++ TY+ LI GLC+  +++ A  +F D+  +G  
Sbjct: 443 DALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYN 502

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
            + Y YTI+I   C  G + EAL L  +M D    PD  T+  ++L    KD
Sbjct: 503 LDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKD 554



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 127/429 (29%), Positives = 225/429 (52%)

Query: 277 NGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLE 336
           N ++Y+   T F  N +++ A  L   +L+      A  +N I+    +       L L 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 337 EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS 396
           ++M  RG+ P L   NILI   C+ G +  A   F ++L+   +PD I++ TL  G C  
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLK 168

Query: 397 GNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
           G I +AFL  D++ +       ++Y TLI GLC+ G+   A  L + +    + P+V+ Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 457 TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA 516
             +++  CK+  ++ A + F+EM+ KG+ PD   Y+  I+G   LG   +A  L  +M+ 
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMIL 288

Query: 517 KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
           +   PD+ T+N+LV+  CK G ++E   +   M+  G  P+ +TY S++     + ++ +
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNK 348

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
            + +FN M + G++P + +Y+++I+      + + A   F EM  K I P+V+TY++LI+
Sbjct: 349 AKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLID 408

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
           GL +  RI  A  L   M + G+ PN  TY  +++  C      +A+ L  +  D+  +P
Sbjct: 409 GLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQP 468

Query: 697 DYCTHSALL 705
           D  T+S L+
Sbjct: 469 DISTYSILI 477



 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 234/451 (51%)

Query: 240 KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
           K + ++Y++   +F    ++ +A+ L   +  R  +P    +N ++    ++        
Sbjct: 47  KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLY 106

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
           L + M   G+K +  + N +I  + + GL+  A ++  +++  G  P   T+  L  GLC
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLC 166

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
             G++  A     +++      D ISY TL++G C+ G    A  L   +    + P VV
Sbjct: 167 LKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVV 226

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
            YNT+ID +C+   +  A  L   M+++GI PDV+TY+ +++G C +G L  A + FN+M
Sbjct: 227 MYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKM 286

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
           + + ++PD + +   +    K G   E   + + M+ +G  P+ +TYN L+ G C +  +
Sbjct: 287 ILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEV 346

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
            +A  +   M   G  PD  +Y+ +I+   ++       +LF  M RK + P +VTY+ L
Sbjct: 347 NKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSL 406

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           I   +  GR+  A     +M  +G+ PN+ TYN++++ LC+  ++D+A  L    +++G 
Sbjct: 407 IDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGF 466

Query: 660 LPNKYTYTILINENCNAGNWQEALRLYKEML 690
            P+  TY+ILI   C +G  ++A ++++++L
Sbjct: 467 QPDISTYSILIKGLCQSGKLEDARKVFEDLL 497



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 129/404 (31%), Positives = 216/404 (53%)

Query: 186 KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVT 245
           K  ++Q  L  +K++  G   D  +   +I  L   G +  A ++ + +    ++P++V 
Sbjct: 168 KGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVM 227

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           YNT++DS CK   + EA +L  EM  +G SP+ VTY+ LI+GF   G+L+ A  L   M+
Sbjct: 228 YNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMI 287

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
              +K   +++N ++  + + G + E   + + M+ +G+ P   TYN L+ G C    V+
Sbjct: 288 LENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVN 347

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
            A+  F  M +  V PDI SY+ ++ G+C+     EA  LF E+  +N++P VVTY++LI
Sbjct: 348 KAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLI 407

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           DGL + G +  A QL + M ++G+ P++ TY  +++  CK   +  A     +   KG Q
Sbjct: 408 DGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQ 467

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           PD   Y+  I G  + G   +A ++ E++L KG+  D+  Y +++ G C  G   EA  L
Sbjct: 468 PDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALAL 527

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           L KM  +G IPD  TY  II +  +  +      L   M+ +GL
Sbjct: 528 LSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 571



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 116/410 (28%), Positives = 218/410 (53%), Gaps = 4/410 (0%)

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
           K++  SY+     +     + +A++L   ++ R   P    +N ++  L K        +
Sbjct: 47  KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLY 106

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
              +M  + + P++++ N L+  +C+ G I  AF +F ++     VP  +T+ TL  GLC
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLC 166

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
             G ++ A    + ++  G   D I+Y  +++G CK+G    A +    +    +QP+  
Sbjct: 167 LKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVV 226

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
            Y T I    K+   +EA+ L  EM++KG  PD++TY+ L+ G C LG L++A +L  KM
Sbjct: 227 MYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKM 286

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRL 609
           + +   PD  T+  +++A  + G ++ G+ +F+ M+++G+ P  VTY  L+  +     +
Sbjct: 287 ILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEV 346

Query: 610 ELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL 669
             A   F+ M   G+ P++ +Y+ +ING C++++ D+A  LF +M  + I+P+  TY+ L
Sbjct: 347 NKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSL 406

Query: 670 INENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVE 719
           I+    +G    AL+L  +M DR + P+ CT++++    LD   K H V+
Sbjct: 407 IDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSI----LDALCKTHQVD 452



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/336 (31%), Positives = 180/336 (53%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K  +V +   +F++M+  G+ PDV   + +I      G    A +++  M    IKP + 
Sbjct: 237 KVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVY 296

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           T+N ++++FCK+G+M+E   +   M  +G  PN VTYN L+ G+    E+ +A+ +   M
Sbjct: 297 TFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTM 356

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
            + G+     SY+ +I G+ +     EA+NL +EM  + + P + TY+ LI GL K GR+
Sbjct: 357 AQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRI 416

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
           S A     +M  + V P+I +YN++L   C++  + +A  L  + + +   P + TY+ L
Sbjct: 417 SYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSIL 476

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           I GLC+ G LE A+++ E+++ +G   DV  YTIM+ G C  G  + A    ++M   G 
Sbjct: 477 IKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGC 536

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
            PD   Y   I    K  +   A +L  EM+A+G P
Sbjct: 537 IPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLP 572



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 4/143 (2%)

Query: 170 CVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE 229
           C    ILD L     K   V++ + +  K    G  PD+   + +IK L  +G    AR+
Sbjct: 436 CTYNSILDAL----CKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARK 491

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           V+  +   G    +  Y  M+  FC EG   EAL LL +M+  GC P+  TY ++I    
Sbjct: 492 VFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLF 551

Query: 290 RNGELEQARGLIRDMLKLGLKVS 312
           +  E + A  L+R+M+  GL ++
Sbjct: 552 KKDENDMAEKLLREMIARGLPLN 574


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 166/555 (29%), Positives = 273/555 (49%), Gaps = 11/555 (1%)

Query: 90  PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVET 149
           P LL   L  + + P +       +   P    D    C  L IL      + ++ +++ 
Sbjct: 63  PSLLSSTLPTLHQNPILVETLLSHLHRHPHC-LDLNTRCITLCILYRLPSPKPSFHILQP 121

Query: 150 VVCVNMHGILDVLIGGGLS------SCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNG 203
           +    +H     +I   LS      +  +  + DLLL  Y +    ++ L   N M  N 
Sbjct: 122 I----LHTTTPTVIFNELSLARNRLNVKTTLVFDLLLSAYCQFRKPDEALECLNLMKENE 177

Query: 204 LLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEAL 263
           ++P  + CN ++ +L        A  VY  M +  IK SIVT+N M++  C+EG+ ++A 
Sbjct: 178 IIPKTETCNSLLSLLLKLNKIKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAK 237

Query: 264 ELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGY 323
           + +  M+  G  PN VTYN +I G+   G+ E A  + + M    LK   ++YN  I   
Sbjct: 238 DFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRL 297

Query: 324 SEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
            ++  + EA  +  +++  G+ P   TYN LI G C  G +  A     EM+ + ++  +
Sbjct: 298 CKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASV 357

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
            +YN L++       I EA  +  E+R + + P VVTYN  I+G CR G+ + A  L + 
Sbjct: 358 FTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDE 417

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           M+ + I P V TYT +++   K   +S A E F + +++G+ PD   +   I G    G+
Sbjct: 418 MVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGN 477

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
              A++L +EM      PD +T+N L+ G C+   +EEA +LL +M   G  PDHI+Y +
Sbjct: 478 IDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNT 537

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           +I    + GD++   ++F+ ML  G  PTL+TY  LI  ++  G  + A     EMQ KG
Sbjct: 538 LISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKG 597

Query: 624 IRPNVITYNALINGL 638
           I P+  TY  +I  +
Sbjct: 598 ITPDDSTYLYVIEAM 612



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 128/382 (33%), Positives = 208/382 (54%), Gaps = 10/382 (2%)

Query: 203 GLLPDVKNCNRIIKVLRDNGFSVK-----AREVYRMMGEFGIKPSIVTYNTMLDSFCKEG 257
           G+ P+V   N +I     NG+ ++     A ++++ M +  +KP   TYN+ +   CKE 
Sbjct: 247 GVKPNVVTYNTVI-----NGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKER 301

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
            ++EA  +L ++   G  PN VTYN LI G    G+L++A     +M+  G+  S  +YN
Sbjct: 302 RIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYN 361

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            +I     +  + EA ++ +EM  +GV P + TYNI I G C+ G    A   F EM+ K
Sbjct: 362 LLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEK 421

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
           N+ P + +Y +L+  + +   + EA   F +     ++P ++ +N LIDG C  G+++ A
Sbjct: 422 NIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRA 481

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
            QL + M N  ++PD +T+  ++ G C+   +  A++  +EM  +G++PD  +Y T I+G
Sbjct: 482 FQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISG 541

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
             K GD  +A  + +EML+ GF P L+TYN L+ G  K+G  + A ELLR+M   G  PD
Sbjct: 542 YSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPD 601

Query: 558 HITYTSIIHASLEMGDLRRGRD 579
             TY  +I A     DL    D
Sbjct: 602 DSTYLYVIEAMKTNDDLVENDD 623



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 147/502 (29%), Positives = 243/502 (48%), Gaps = 37/502 (7%)

Query: 205 LPDVKNCNRIIK-VLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEAL 263
           LP  K    I++ +L     +V   E+        +K ++V ++ +L ++C+  +  EAL
Sbjct: 109 LPSPKPSFHILQPILHTTTPTVIFNELSLARNRLNVKTTLV-FDLLLSAYCQFRKPDEAL 167

Query: 264 ELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGY 323
           E L  M+     P   T N L++   +  +++ A  +  +M+K+ +K S  ++N +I   
Sbjct: 168 ECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMVKMNIKSSIVTFNIMINIL 227

Query: 324 SEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
             +G   +A +    M   GV P + TYN +I G C  G+   A   F  M  KN+ PD 
Sbjct: 228 CREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDC 287

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
            +YN+ +   C+   I EA  +  +L    LVP  VTYN LIDG C  GDL+ A   ++ 
Sbjct: 288 YTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDE 347

Query: 444 MINQGIL-----------------------------------PDVITYTIMVNGSCKMGN 468
           M+N+GI+                                   PDV+TY I +NG C+ GN
Sbjct: 348 MMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGN 407

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
              A   F+EM+ K ++P    YT+ I    K    SEA    ++ + +G  PD+I +N 
Sbjct: 408 AKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNA 467

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           L+ G C  G+++ A +LL++M     +PD +T+ +++        +   + L + M  +G
Sbjct: 468 LIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERG 527

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
           + P  ++Y  LI  ++ RG ++ A   F EM   G  P ++TYNALI G  ++   D A 
Sbjct: 528 IKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAE 587

Query: 649 GLFIDMEEEGILPNKYTYTILI 670
            L  +M+ +GI P+  TY  +I
Sbjct: 588 ELLREMQSKGITPDDSTYLYVI 609



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 198/369 (53%)

Query: 337 EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS 396
           EEMV   +  ++ T+NI+I  LC+ G+   A+     M    V P++++YNT++ GYC  
Sbjct: 206 EEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLR 265

Query: 397 GNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
           G    A  +F  ++ +NL P   TYN+ I  LC+   +E A  +   ++  G++P+ +TY
Sbjct: 266 GKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTY 325

Query: 457 TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA 516
             +++G C  G+L  A  + +EM+ +G+    F Y   I          EA  + +EM  
Sbjct: 326 NALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMRE 385

Query: 517 KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
           KG  PD++TYN+ ++G C+ G+ ++A  L  +MV     P   TYTS+I    +   +  
Sbjct: 386 KGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSE 445

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
             + F   +++G+ P ++ +  LI  H   G ++ AF    EM    + P+ +T+N L+ 
Sbjct: 446 AEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQ 505

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
           G CR R++++A  L  +M+E GI P+  +Y  LI+     G+ ++AL ++ EML    +P
Sbjct: 506 GYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDP 565

Query: 697 DYCTHSALL 705
              T++AL+
Sbjct: 566 TLLTYNALI 574



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 124/416 (29%), Positives = 213/416 (51%), Gaps = 11/416 (2%)

Query: 292 GELEQARGL--IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
            EL  AR    ++  L   L +SA+      C + +    +E LNL +E     + P   
Sbjct: 133 NELSLARNRLNVKTTLVFDLLLSAY------CQFRKPDEALECLNLMKE---NEIIPKTE 183

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           T N L+  L K  ++  A   + EM++ N+   I+++N ++   CR G   +A      +
Sbjct: 184 TCNSLLSLLLKLNKIKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHM 243

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
               + P VVTYNT+I+G C  G  E A ++ + M ++ + PD  TY   ++  CK   +
Sbjct: 244 EVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRI 303

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A     ++L  GL P+   Y   I G    GD  +A+  ++EM+ +G    + TYN+L
Sbjct: 304 EEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLL 363

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           +H L     +EEA +++++M   G  PD +TY   I+     G+ ++   LF+ M+ K +
Sbjct: 364 IHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNI 423

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
            PT+ TYT LI     R R+  A   F +   +G+ P++I +NALI+G C    ID+A+ 
Sbjct: 424 RPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQ 483

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           L  +M+   ++P++ T+  L+   C     +EA +L  EM +R I+PD+ +++ L+
Sbjct: 484 LLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLI 539


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 146/520 (28%), Positives = 267/520 (51%), Gaps = 14/520 (2%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
           F+ M+R+       +CN++I V         A  +YR M    I  +I ++N ++  FC 
Sbjct: 94  FDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCD 153

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI----------RDML 305
             ++  +L    ++   G  P+ VT+N L+ G      + +A  L             M+
Sbjct: 154 CHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMV 213

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
           ++GL     ++N +I G   +G ++EA  L  +MV +G+   + TY  ++ G+CK G   
Sbjct: 214 EIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTK 273

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
            A +   +M   ++ PD++ Y+ ++   C+ G+  +A  LF E+  + + P V TYN +I
Sbjct: 274 SALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMI 333

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           DG C +G    AQ+L  +MI + I PDV+T+  +++ S K G L  A +  +EML + + 
Sbjct: 334 DGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF 393

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           PD   Y + I G  K     +A  + + M +    PD++T+N ++   C+   ++E  +L
Sbjct: 394 PDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQL 449

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
           LR++   G + +  TY ++IH   E+ +L   +DLF  M+  G+ P  +T  +L++    
Sbjct: 450 LREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCE 509

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
             +LE A   F  +Q+  I  + + YN +I+G+C+  ++D+A+ LF  +   G+ P+  T
Sbjct: 510 NEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQT 569

Query: 666 YTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           Y ++I+  C      +A  L+ +M D   EPD  T++ L+
Sbjct: 570 YNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 609



 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 145/489 (29%), Positives = 250/489 (51%), Gaps = 14/489 (2%)

Query: 193 LLVFNKMLRNGLLPDVKNCN----------RIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           L  F K+ + G  PDV   N          RI + L   G+ V+   ++  M E G+ P 
Sbjct: 161 LSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPV 220

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           ++T+NT+++  C EG + EA  L+ +M G+G   + VTY  ++ G  + G+ + A  L+ 
Sbjct: 221 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 280

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M +  +K     Y+ II    + G   +A  L  EM+ +G+AP + TYN +I G C +G
Sbjct: 281 KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 340

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R SDA+    +M+ + + PD++++N L+    + G + EA  L DE+  R + P  VTYN
Sbjct: 341 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 400

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           ++I G C++   + A+ + + M +    PDV+T+  +++  C+   +    +   E+ R+
Sbjct: 401 SMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 456

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           GL  +   Y T I G  ++ + + A  L +EM++ G  PD IT N+L++G C+   LEEA
Sbjct: 457 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 516

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            EL   +       D + Y  IIH   +   +    DLF ++   G+ P + TY V+I  
Sbjct: 517 LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISG 576

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
              +  +  A + F +M+  G  P+  TYN LI G  +   ID++  L  +M   G   +
Sbjct: 577 FCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 636

Query: 663 KYTYTILIN 671
            +T  ++ +
Sbjct: 637 AFTIKMVAD 645



 Score =  248 bits (634), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 142/466 (30%), Positives = 230/466 (49%), Gaps = 14/466 (3%)

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLW----------EMQGRGCSPNGVTYNV 283
           + + G +P +VT+NT+L   C E  + EAL L            +M   G +P  +T+N 
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNT 226

Query: 284 LITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG 343
           LI G    G + +A  L+  M+  GL +   +Y  I+ G  + G    ALNL  +M    
Sbjct: 227 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 286

Query: 344 VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF 403
           + P +  Y+ +I  LCK G  SDA++ F EML K + P++ +YN ++ G+C  G   +A 
Sbjct: 287 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 346

Query: 404 LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
            L  ++  R + P V+T+N LI    + G L  A++L + M+++ I PD +TY  M+ G 
Sbjct: 347 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 406

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
           CK      A+  F+ M      PD   + T I    +     E  +L  E+  +G   + 
Sbjct: 407 CKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 462

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
            TYN L+HG C++ +L  A +L ++M+  G  PD IT   +++   E   L    +LF  
Sbjct: 463 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 522

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           +    +    V Y ++IH      +++ A+  F  + + G+ P+V TYN +I+G C    
Sbjct: 523 IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA 582

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           I  A  LF  M++ G  P+  TY  LI     AG   +++ L  EM
Sbjct: 583 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 628



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 130/405 (32%), Positives = 207/405 (51%), Gaps = 14/405 (3%)

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
           A++L  +M  R +   + ++NILI   C   ++S +   F ++ +    PD++++NTLL+
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184

Query: 392 GYCRSGNIGEAFLLF----------DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           G C    I EA  LF          D++    L P V+T+NTLI+GLC  G +  A  L 
Sbjct: 185 GLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALV 244

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
             M+ +G+  DV+TY  +VNG CKMG+   A    ++M    ++PD   Y+  I    K 
Sbjct: 245 NKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKD 304

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
           G  S+A  L  EML KG  P++ TYN ++ G C  G   +A  LLR M+     PD +T+
Sbjct: 305 GHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTF 364

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
            ++I AS++ G L     L + ML + + P  VTY  +I+      R + A   F  M  
Sbjct: 365 NALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA- 423

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
               P+V+T+N +I+  CR +R+D+   L  ++   G++ N  TY  LI+  C   N   
Sbjct: 424 ---SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNA 480

Query: 682 ALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
           A  L++EM+   + PD  T + LL    + +    A+E  E + +
Sbjct: 481 AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQM 525



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 156/319 (48%), Gaps = 12/319 (3%)

Query: 398 NIGEAFLLFDEL-RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
           ++ +A   FD + RSR    T V  N +I    R    +VA  L   M  + I  ++ ++
Sbjct: 86  SLDDAIDFFDYMVRSRPFY-TAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144

Query: 457 TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY-------- 508
            I++   C    LS +   F ++ + G QPD   + T + G       SEA         
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204

Query: 509 --RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
              L ++M+  G  P +IT+N L++GLC  G + EA  L+ KMVG G   D +TY +I++
Sbjct: 205 TGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 264

Query: 567 ASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRP 626
              +MGD +   +L + M    + P +V Y+ +I      G    A   FSEM  KGI P
Sbjct: 265 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 324

Query: 627 NVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLY 686
           NV TYN +I+G C   R   A  L  DM E  I P+  T+  LI+ +   G   EA +L 
Sbjct: 325 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 384

Query: 687 KEMLDREIEPDYCTHSALL 705
            EML R I PD  T+++++
Sbjct: 385 DEMLHRCIFPDTVTYNSMI 403



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 69/144 (47%)

Query: 170 CVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE 229
           C      ++LL  + +   +E+ L +F  +  + +  D    N II  +       +A +
Sbjct: 494 CPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWD 553

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           ++  +   G++P + TYN M+  FC +  + +A  L  +M+  G  P+  TYN LI G  
Sbjct: 554 LFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCL 613

Query: 290 RNGELEQARGLIRDMLKLGLKVSA 313
           + GE++++  LI +M   G    A
Sbjct: 614 KAGEIDKSIELISEMRSNGFSGDA 637



 Score = 47.4 bits (111), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 4/121 (3%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K S V++   +F  +  +G+ PDV+  N +I           A  ++  M + G +P   
Sbjct: 544 KGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNS 603

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TYNT++    K GE+ +++EL+ EM+  G S +  T   ++     +G L+++     DM
Sbjct: 604 TYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLITDGRLDKS---FSDM 659

Query: 305 L 305
           L
Sbjct: 660 L 660


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 145/470 (30%), Positives = 245/470 (52%), Gaps = 6/470 (1%)

Query: 241 PSI---VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           PS+   V+YNT+L + C++G   +A   L  +      P  V+Y  L+          QA
Sbjct: 73  PSVRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQA 132

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
            GL+RDM   G++    +Y  +I G  +   + +A+ L  EM   G+ P +  Y+ L+ G
Sbjct: 133 VGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQG 192

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
            CK GR       F EM  + + PD++ Y  L+   CR G + +A  + D++  R L P 
Sbjct: 193 YCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPN 252

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           VVTYN LI+ +C+ G ++ A  L+ NM+ +G+  D +TY  ++ G   +  +  A     
Sbjct: 253 VVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLE 312

Query: 478 EMLR--KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
           EM+     ++P+   + + I G  K G   +A+++++ M   G   +L+T+N+L+ GL +
Sbjct: 313 EMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLR 372

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
           +  +++A EL+ +M   G  PD  TY+ +I+   +M  + R   L + M R G+ P LV 
Sbjct: 373 VHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVH 432

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           Y  L+ A   +G +E A  +F EM  K  + +V+ Y+ +I+G CRLR    A      M 
Sbjct: 433 YIPLLAALCEQGMMEQARNFFDEMH-KNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHML 491

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +EG++P+  TY++LIN   N+G+   A R+ K+M      PD     +L+
Sbjct: 492 DEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLI 541



 Score =  241 bits (614), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 135/436 (30%), Positives = 230/436 (52%), Gaps = 3/436 (0%)

Query: 191 QCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTML 250
           Q + +   M  +G+ PDV     +I+ L D     KA E+ R M E GI+P++V Y+ +L
Sbjct: 131 QAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLL 190

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
             +CK G  +   ++  EM GRG  P+ V Y  LI    R G++++A  ++  M++ GL+
Sbjct: 191 QGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLE 250

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
            +  +YN +I    ++G + EA++L   M+ +GVA    TYN LI GL     + +A   
Sbjct: 251 PNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGL 310

Query: 371 FFEMLRKNVI--PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             EM+    +  P+++++N++++G C++G + +AF + D +        +VT+N LI GL
Sbjct: 311 LEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGL 370

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
            R   ++ A +L + M + G+ PD  TY+I++NG CKM  +  A    ++M R G++P+ 
Sbjct: 371 LRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPEL 430

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             Y   +A   + G   +A    +EM  K    D++ Y+ ++HG C+L   + A E L+ 
Sbjct: 431 VHYIPLLAALCEQGMMEQARNFFDEM-HKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKH 489

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M+ +G IPD +TY+ +I+     GDL     +   M   G  P +  +  LI  + A+G 
Sbjct: 490 MLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGD 549

Query: 609 LELAFMYFSEMQVKGI 624
            E       EM  K I
Sbjct: 550 TEKVLELIREMTAKDI 565



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 144/499 (28%), Positives = 252/499 (50%), Gaps = 8/499 (1%)

Query: 205 LPDVKNC---NRIIKVL-RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQ 260
           LP V++    N ++  L R  G    A  + R+M     +P+ V+Y T++ + C E    
Sbjct: 72  LPSVRDAVSYNTVLAALCRQGGCLDAALFLLRVMAH-ETRPTAVSYTTLMRALCAERRTG 130

Query: 261 EALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII 320
           +A+ LL +MQ  G  P+ VTY  LI G     ++++A  L+R+M + G++ +   Y+ ++
Sbjct: 131 QAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLL 190

Query: 321 CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
            GY + G       + EEM  RG+ P +  Y  LI  LC+ G+V  A     +M+ + + 
Sbjct: 191 QGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLE 250

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           P++++YN L+   C+ G++ EA  L + +  + +    VTYNTLI GL    +++ A  L
Sbjct: 251 PNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGL 310

Query: 441 KENMINQGIL--PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
            E MI+   +  P+V+T+  +++G CK G +  A +  + M   G   +   +   I G 
Sbjct: 311 LEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGL 370

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
           L++    +A  L +EM + G  PD  TY++L++G CK+  ++ A  LL KM  DG  P+ 
Sbjct: 371 LRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPEL 430

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
           + Y  ++ A  E G + + R+ F+ M  K     +V Y+ +IH        + A  +   
Sbjct: 431 VHYIPLLAALCEQGMMEQARNFFDEM-HKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKH 489

Query: 619 MQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGN 678
           M  +G+ P+ +TY+ LIN       +  A  +   M   G +P+   +  LI      G+
Sbjct: 490 MLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGD 549

Query: 679 WQEALRLYKEMLDREIEPD 697
            ++ L L +EM  ++I  D
Sbjct: 550 TEKVLELIREMTAKDIALD 568



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 142/459 (30%), Positives = 241/459 (52%), Gaps = 11/459 (2%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V++ + +  +M  +G+ P+V   + +++     G      +V+  M   GI+P +V Y  
Sbjct: 164 VDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTG 223

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++DS C+EG++++A +++ +M  RG  PN VTYNVLI    + G +++A  L  +ML+ G
Sbjct: 224 LIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKG 283

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMV--TRGVAPTLATYNILIYGLCKWGRVSD 366
           + + A +YN +I G S    + EA+ L EEM+     V P + T+N +I+GLCK GR+  
Sbjct: 284 VALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQ 343

Query: 367 ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
           A      M       +++++N L+ G  R   + +A  L DE+ S  L P   TY+ LI+
Sbjct: 344 AFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILIN 403

Query: 427 GLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
           G C+   ++ A+ L   M   GI P+++ Y  ++   C+ G +  AR FF+EM  K  + 
Sbjct: 404 GFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEM-HKNCKL 462

Query: 487 DRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
           D  AY+T I G  +L D   A    + ML +G  PD +TY++L++     G L  A  +L
Sbjct: 463 DVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVL 522

Query: 547 RKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK--GLSPTLVT--YTVLIHA 602
           ++M   GF+PD   + S+I      GD  +  +L   M  K   L   +++  YT L+  
Sbjct: 523 KQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIALDSKIISTIYTCLVAN 582

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
           +  +  L+    + +E+  KG    VI+ + L N L +L
Sbjct: 583 NEGKALLQSVPGFDTEVS-KGA---VISSHELTNMLHKL 617



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 127/395 (32%), Positives = 203/395 (51%), Gaps = 3/395 (0%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           ++ +   LL  Y K    E    VF +M   G+ PDV     +I  L   G   KA +V 
Sbjct: 182 NVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVM 241

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M E G++P++VTYN +++S CKEG ++EA+ L   M  +G + + VTYN LITG S  
Sbjct: 242 DKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGV 301

Query: 292 GELEQARGLIRDMLKLGLKVSAH--SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
            E+++A GL+ +M+     V  +  ++N +I G  + G + +A  + + M   G A  L 
Sbjct: 302 LEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLV 361

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           T+N+LI GL +  +V  A     EM    + PD  +Y+ L+ G+C+   +  A  L  ++
Sbjct: 362 TFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKM 421

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
           R   + P +V Y  L+  LC  G +E A+   + M     L DV+ Y+ M++G+C++ + 
Sbjct: 422 RRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKNCKL-DVVAYSTMIHGACRLRDR 480

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A EF   ML +GL PD   Y+  I      GD   A R+ ++M A GF PD+  ++ L
Sbjct: 481 KSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSL 540

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
           + G    G  E+  EL+R+M       D    ++I
Sbjct: 541 IKGYGAKGDTEKVLELIREMTAKDIALDSKIISTI 575


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 152/457 (33%), Positives = 235/457 (51%), Gaps = 8/457 (1%)

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M   G  P+ VT+N +++ F K+G   +   LL  M  RG  PN V+YN L+ G  +   
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 294 LEQARGLIRDMLKLGLKVSAH--SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
             +A  L+RDM+  G + +    +Y+ ++ GY + G + E+  L +E+++RG+ P    Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
             ++  LCK  R+ +A     EM+R    P +I++NTL+ G CR  N+  A  L   + +
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
             +   VVTYNTL+DGLC+ G L+ A+QL E M   G  PDV+ Y+  V G CK G +  
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK-GFPPDLITYNVLV 530
           A +   +M      P+   Y T + G  K G    A  + E+M +  G   +++ Y+ +V
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
            GLCKLG  +EA  ++  M   G  PD +TY+S+++   + G +    +    M  +G  
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR-----PNVITYNALINGLCRLRRID 645
           P  VTY  L+H   + GRL  A     EM   G       P+V TYNALI GLC+  RID
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRID 420

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
            A   F  M  +G  P+  +Y+ ++     +G   +A
Sbjct: 421 DALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 155/462 (33%), Positives = 247/462 (53%), Gaps = 18/462 (3%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAR-----EVYRMMGEFGIKPSIVTYNTMLDSF 253
           M R G  P+    N ++     NGFS + R      +   M   GI+P++V+YN +L+  
Sbjct: 1   MDRTGCPPNSVTFNALV-----NGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGL 55

Query: 254 CKEGEMQEALELLWEMQGRG--CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKV 311
           CK     EA EL+ +M  RG   +P+ VTY+ L++G+ + G++E++R L+++++  GL+ 
Sbjct: 56  CKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRP 115

Query: 312 SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRF 371
            A  Y  ++    +   L EAL L EEM+  G  PTL T+N LI G C+   +  A    
Sbjct: 116 DALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLL 175

Query: 372 FEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY 431
             M    V  D+++YNTL+ G C++G + EA  L + +++    P VV Y++ + GLC+ 
Sbjct: 176 QTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKS 235

Query: 432 GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK-GLQPDRFA 490
           G +  A Q+ E M +    P+V+TY  +++G CK G +  A E   +M    G   +   
Sbjct: 236 GKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVG 295

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           Y+T + G  KLG T EA  + E M   G  PD++TY+ LV+GLCK G +EEA E +R+M 
Sbjct: 296 YSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMA 355

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG-----LSPTLVTYTVLIHAHAA 605
            +G  P+ +TY S++H     G L     +   M   G       P++ TY  LI     
Sbjct: 356 MEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCK 415

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
            GR++ A  +F  M+ +G  P+ ++Y+ ++ GL R  R  QA
Sbjct: 416 AGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 142/445 (31%), Positives = 239/445 (53%), Gaps = 8/445 (1%)

Query: 269 MQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
           M   GC PN VT+N L+ GFS+ G       L+  M   G++ +  SYN ++ G  +   
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 329 LVEALNLEEEMVTRG--VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISY 386
             EA  L  +M++RG    P L TY+ L+ G CK G+V ++R    E++ + + PD + Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 387 NTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMIN 446
             ++   C+S  +GEA  L +E+      PT++T+NTLI G CR  +LE+A  L + M  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 447 QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSE 506
            G+  DV+TY  +++G CK G L  A +    M   G  PD  AY++ + G  K G    
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 507 AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV-GDGFIPDHITYTSII 565
           A+++ E+M      P+++TYN ++ GLCK G ++ A E++ +M   DG   + + Y++++
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
               ++G  +  R +   M R G  P +VTY+ L++     G++E A     EM ++G +
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDM-----EEEGILPNKYTYTILINENCNAGNWQ 680
           PN +TY +L++GLC   R+ +A  +  +M       +   P+  TY  LI   C AG   
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRID 420

Query: 681 EALRLYKEMLDREIEPDYCTHSALL 705
           +AL+ ++ M  +  +PD  ++S ++
Sbjct: 421 DALKFFQRMRSQGCDPDGVSYSTIV 445



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 116/424 (27%), Positives = 198/424 (46%), Gaps = 37/424 (8%)

Query: 158 ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
           + D++  GG S+   +     LL  Y K   VE+   +  +++  GL PD     +++  
Sbjct: 68  VRDMISRGGRST-PDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMAS 126

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
           L  +    +A E+   M   G  P+++T+NT++   C+E  ++ A  LL  M   G   +
Sbjct: 127 LCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKAD 186

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
            VTYN L+ G  + G L++A  L+  M   G      +Y+  + G  + G ++ A  + E
Sbjct: 187 VVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLE 246

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP-DIISYNTLLYGYCRS 396
           +M      P + TYN ++ GLCK G++  A     +M   +    +++ Y+T++ G C+ 
Sbjct: 247 QMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKL 306

Query: 397 GNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
           G   EA  + + +      P VVTY++L++GLC+ G +E A +    M  +G  P+ +TY
Sbjct: 307 GRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTY 366

Query: 457 TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA 516
             +V+G C  G L+ A     EM   G   D                             
Sbjct: 367 CSLVHGLCSCGRLAEAERMVEEMSSGGGGGDH---------------------------- 398

Query: 517 KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
              PP + TYN L+ GLCK G +++A +  ++M   G  PD ++Y++I+      G  R 
Sbjct: 399 --CPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVE-----GLARS 451

Query: 577 GRDL 580
           GR L
Sbjct: 452 GRAL 455



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 123/248 (49%), Gaps = 2/248 (0%)

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M R G  P+   +   + G  K G   +  RL E M A+G  P++++YN L+ GLCKL  
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 539 LEEANELLRKMVGDG--FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
             EA EL+R M+  G    PD +TY++++    + G +   R+L   ++ +GL P  + Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
           T ++ +     RL  A     EM   G  P +IT+N LI+G CR + ++ A  L   M  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVH 716
            G+  +  TY  L++  C AG  QEA +L + M      PD   +S+ +         ++
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 717 AVEYLESL 724
           A + LE +
Sbjct: 241 AHQVLEQM 248


>gi|50582688|gb|AAT78758.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
 gi|108709716|gb|ABF97511.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1025

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 166/575 (28%), Positives = 270/575 (46%), Gaps = 52/575 (9%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y KK   +  L + + M +NG+  D+   N +I  L     S +A  + + M E  + P 
Sbjct: 274 YVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPD 333

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR---- 298
             +YNT++  F  EG++  A+ +  +M  +   P+  TY  LI G+ RNG  ++AR    
Sbjct: 334 ECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLY 393

Query: 299 ----------------------------------------GLIRD-------MLKLGLKV 311
                                                   G+I +       M ++ +  
Sbjct: 394 EMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALINEGMIAEAEQFKQYMSRMKISF 453

Query: 312 SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRF 371
              S+N II  Y ++G ++EA ++ + MV  G  P + TY  L+ GLC+ G +  A+   
Sbjct: 454 DVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFM 513

Query: 372 FEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY 431
             +L K    D  + NTLL G C+ G + EA  L +++ +RN++P   TY  L+DG C+ 
Sbjct: 514 VYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKR 573

Query: 432 GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML-RKGLQPDRFA 490
           G +  A  L + M+ +G++PD I YT ++NG    G +  A   F E++ ++GL  D  A
Sbjct: 574 GKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIA 633

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           Y + + G LK G  +E  RL   M      P   +YN+L+HG  K G L     L R MV
Sbjct: 634 YNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMV 693

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
            +G  PD++TY  +I    E G +         M+ +G+ P  + + +LI A + + ++ 
Sbjct: 694 KEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMS 753

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
            A   FS M+   + P+  TY A++NGL R   + Q+Y +  DM E G+ P    Y  LI
Sbjct: 754 NALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALI 813

Query: 671 NENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           N  C  G+   A  L ++M    + P     S+++
Sbjct: 814 NAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIV 848



 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 147/517 (28%), Positives = 261/517 (50%), Gaps = 1/517 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y ++  V +   V++ M+R+G  PD+     +++ L   G  V+A+E    + E      
Sbjct: 465 YCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAID 524

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             T NT+L   CK G + EAL+L  +M  R   P+  TY +L+ GF + G++  A  L++
Sbjct: 525 EKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQ 584

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR-GVAPTLATYNILIYGLCKW 361
            ML+ GL     +Y  ++ G   +G +  A  + +E++ + G+      YN ++ G  K 
Sbjct: 585 MMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKG 644

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           G++++       M    V P   SYN L++GY + G +     L+ ++    + P  VTY
Sbjct: 645 GQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTY 704

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
             LI GLC YG +E+A +  E M+ +G+ PD + + I++    +   +S A + F+ M  
Sbjct: 705 RLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKW 764

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
             + P    Y   + G ++     ++Y +  +M+  G  P    Y  L++  C++G ++ 
Sbjct: 765 LHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALINAKCRVGDIDG 824

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A EL   M   G +P  +  +SI+    + G +     +F++++R G+ PT+ T+T L+H
Sbjct: 825 AFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMH 884

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
                 +++ AF     M+  G++ +V+TYN LI GLC  + I  A  L+ +M+ +G+LP
Sbjct: 885 GLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLP 944

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
           N  TY  L       G  Q+  +L K++ DR I P Y
Sbjct: 945 NITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPSY 981



 Score =  255 bits (651), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 174/644 (27%), Positives = 299/644 (46%), Gaps = 65/644 (10%)

Query: 145 WVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGL 204
           W V+   C +   ILD +   G+ +   +   ++++    K     +  L+  +M    L
Sbjct: 273 WYVKKGRCKSALRILDDMEKNGIEA--DLYTYNIMIDKLCKLKRSARAYLLLKRMREVNL 330

Query: 205 LPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALE 264
            PD  + N +I      G    A  ++  M    +KPS+ TY  ++D +C+ G   EA  
Sbjct: 331 TPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARR 390

Query: 265 LLWEMQ--------------------GRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           +L+EMQ                      G  P+ +TY+ LI      G + +A    + M
Sbjct: 391 VLYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALIN----EGMIAEAEQFKQYM 446

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
            ++ +     S+N II  Y ++G ++EA ++ + MV  G  P + TY  L+ GLC+ G +
Sbjct: 447 SRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHL 506

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
             A+     +L K    D  + NTLL G C+ G + EA  L +++ +RN++P   TY  L
Sbjct: 507 VQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTIL 566

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML-RKG 483
           +DG C+ G +  A  L + M+ +G++PD I YT ++NG    G +  A   F E++ ++G
Sbjct: 567 LDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEG 626

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQE------------------------------- 512
           L  D  AY + + G LK G  +E  RL                                 
Sbjct: 627 LYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTL 686

Query: 513 ----EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
               +M+ +G  PD +TY +L+ GLC+ G +E A + L KMV +G  PD++ +  +I A 
Sbjct: 687 YLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAF 746

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
            E   +     LF+ M    +SP+  TY  +++    +  L+ ++    +M   G++P  
Sbjct: 747 SEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKH 806

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
             Y ALIN  CR+  ID A+ L  DM+  G++P++   + ++   C  G  +EA+ ++  
Sbjct: 807 THYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSS 866

Query: 689 MLDREIEPDYCTHSAL---LLKQLDKDYKVHAVEYLESLTLGAE 729
           ++   + P   T + L   L K+   D   H  + +ES  L  +
Sbjct: 867 IMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVD 910



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 178/681 (26%), Positives = 300/681 (44%), Gaps = 99/681 (14%)

Query: 105 RIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIG 164
           ++ALR    +  Q G+ R   ++C  + IL+++ +   A  V+  +              
Sbjct: 89  KLALRMLDSIVQQSGLDRITHIYCMAVHILVQAQMPSQAMSVLRHLALT----------- 137

Query: 165 GGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKN---CNRIIKVLRDN 221
            G S                       C  +F+ +LR     D  N    + ++      
Sbjct: 138 -GFS-----------------------CSAIFSSLLRTISRCDPTNLFSVDLLVNAYVKE 173

Query: 222 GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY 281
           G  + A      M E G K S+ + N +L++     + +     L E   R    +  T 
Sbjct: 174 GKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFPLDVTTC 233

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
           N+++      G+L +A  +++ M    L  +A +YN I+  Y +KG    AL + ++M  
Sbjct: 234 NIVLNSLCTQGKLSKAESMLQKMKNCRLP-NAVTYNTILNWYVKKGRCKSALRILDDMEK 292

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
            G+   L TYNI+I  LCK  R + A      M   N+ PD  SYNTL++G+   G I  
Sbjct: 293 NGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINL 352

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYG--------------------DLEVAQQLK 441
           A  +F+++  ++L P+V TY  LIDG CR G                    ++  A+Q+ 
Sbjct: 353 AIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQIL 412

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
           + M+  GI PDVITY+ ++N     G ++ A +F   M R  +  D  ++   I    + 
Sbjct: 413 KCMLADGIDPDVITYSALINE----GMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQR 468

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITY----------------------------------- 526
           G+  EA+ + + M+  G+PPD+ TY                                   
Sbjct: 469 GNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTL 528

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           N L+ G+CK G+L+EA +L  KMV    +PD  TYT ++    + G +     L   ML 
Sbjct: 529 NTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLE 588

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK-GIRPNVITYNALINGLCRLRRID 645
           KGL P  + YT L++     G+++ A   F E+  K G+  + I YN+++NG  +  +I+
Sbjct: 589 KGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQIN 648

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +   L  +M E  + P+  +Y IL++     G     L LY++M+   I+PD  T+  L+
Sbjct: 649 EIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLI 708

Query: 706 LKQLDKDYKVHAVEYLESLTL 726
               +      AV++LE + L
Sbjct: 709 FGLCEYGLIEIAVKFLEKMVL 729



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/392 (24%), Positives = 187/392 (47%), Gaps = 22/392 (5%)

Query: 117 QPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVC--------VNMHGILDVLIGGGLS 168
           + G+  D   +  +L  L+  G +++A ++ + ++C        +  + +++  + GG  
Sbjct: 588 EKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQI 647

Query: 169 SCV--------------SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRI 214
           + +              S    ++L+  Y KK  + + L ++  M++ G+ PD      +
Sbjct: 648 NEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLL 707

Query: 215 IKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGC 274
           I  L + G    A +    M   G+ P  + ++ ++ +F ++ +M  AL+L   M+    
Sbjct: 708 IFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHM 767

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
           SP+  TY  ++ G  R   L+Q+  ++ DM++ GL+     Y  +I      G +  A  
Sbjct: 768 SPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALINAKCRVGDIDGAFE 827

Query: 335 LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
           L+E+M   GV P+    + ++ GLCK G+V +A   F  ++R  ++P I ++ TL++G C
Sbjct: 828 LKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLC 887

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
           +   I +AF L   + S  L   VVTYN LI GLC    +  A  L E M ++G+LP++ 
Sbjct: 888 KEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNIT 947

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
           TY  +       G +    +   ++  +G+ P
Sbjct: 948 TYITLTGAMYATGTMQDGEKLLKDIEDRGIVP 979



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 149/301 (49%), Gaps = 14/301 (4%)

Query: 117 QPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKIL 176
           + G+K D   +  ++  L E GL+  A   +E +V       L+ +    L+        
Sbjct: 694 KEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMV-------LEGVFPDNLA-------F 739

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           D+L+  +++KS +   L +F+ M    + P  K    ++  L    +  ++ E+   M E
Sbjct: 740 DILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVE 799

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G++P    Y  ++++ C+ G++  A EL  +M+  G  P+ V  + ++ G  + G++E+
Sbjct: 800 SGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEE 859

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  +   +++ G+  +  ++  ++ G  ++  + +A +L++ M + G+   + TYN+LI 
Sbjct: 860 AIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLIT 919

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           GLC    + DA   + EM  K ++P+I +Y TL      +G + +   L  ++  R +VP
Sbjct: 920 GLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVP 979

Query: 417 T 417
           +
Sbjct: 980 S 980


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 156/494 (31%), Positives = 258/494 (52%), Gaps = 4/494 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V+  +  FN+ML     P +   N+I+           A  +   +   GI+P ++T N 
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++ FC  G++     +L ++  RG  P+ VT N LI G    G++++A      +L  G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            +++  SY  +I G  + G    A+ L +++  R   P +  Y+ +I  LCK+  VS+A 
Sbjct: 160 FQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAY 219

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F EM  K +  D+++Y+TL+YG+C  G + EA  L +E+  + + P V TYN L+D L
Sbjct: 220 GLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G ++ A+ +   M+   + PDVITY+ +++G   +  +  A+  FN M   G+ PD 
Sbjct: 280 CKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDV 339

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             YT  I G  K     EA  L +EM  K   P ++TY+ L+ GLCK G +    +L+ +
Sbjct: 340 HTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDE 399

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M   G   + ITY+S+I    + G L R   LFN M  +G+ P   T+T+L+      GR
Sbjct: 400 MHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGR 459

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           L+ A   F ++  KG   NV TYN +I+G C+   +++A  +   ME+ G +P+  T+ I
Sbjct: 460 LKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEI 519

Query: 669 LI----NENCNAGN 678
           +I     ++ N GN
Sbjct: 520 IIIALFKKDENGGN 533



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 144/472 (30%), Positives = 246/472 (52%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P I+ +N +LDSF K      A+ L   ++ +G  P+ +T N+LI  F   G++     +
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  +LK G      + N +I G   KG + +AL+  ++++ +G      +Y  LI G+CK
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCK 176

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G    A     ++  +   P+++ Y+T++   C+   + EA+ LF E+  + +   VVT
Sbjct: 177 IGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 236

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y+TLI G C  G L+ A  L   M+ + I P+V TY I+V+  CK G +  A+     ML
Sbjct: 237 YSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML 296

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           +  ++PD   Y+T + G   + +  +A  +   M   G  PD+ TY +L++G CK   ++
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD 356

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA  L ++M     +P  +TY+S+I    + G +    DL + M  +G    ++TY+ LI
Sbjct: 357 EALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLI 416

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                 G L+ A   F++M+ +GIRPN  T+  L++GLC+  R+  A  +F D+  +G  
Sbjct: 417 DGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYH 476

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
            N YTY ++I+ +C  G  +EAL +  +M D    PD  T   +++    KD
Sbjct: 477 LNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFKKD 528



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 150/469 (31%), Positives = 245/469 (52%), Gaps = 45/469 (9%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
           L++L+  +     +     V  K+L+ G  PD    N +IK L   G   KA   +  + 
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
             G + + V+Y T+++  CK G+ + A++LL ++ GR   PN V Y+ +I    +   + 
Sbjct: 157 AQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVS 216

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
           +A GL  +M   G+     +Y+ +I G+  +G L EA+ L  EMV + + P + TYNIL+
Sbjct: 217 EAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILV 276

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY---------------------- 393
             LCK G+V +A+     ML+  V PD+I+Y+TL+ GY                      
Sbjct: 277 DALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVT 336

Query: 394 -------------CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
                        C++  + EA  LF E+  +N+VP +VTY++LIDGLC+ G +     L
Sbjct: 337 PDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDL 396

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
            + M ++G   +VITY+ +++G CK G+L  A   FN+M  +G++P+ F +T  + G  K
Sbjct: 397 IDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCK 456

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
            G   +A  + +++L KG+  ++ TYNV++ G CK G LEEA  +L KM  +G IPD +T
Sbjct: 457 GGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVT 516

Query: 561 YTSIIHASLEMGDLRRGRDLFNNML------RKGLSPTLVTYTVLIHAH 603
           +  II A L   D   G   F+  +      +KG +P++   T   H+H
Sbjct: 517 FEIIIIA-LFKKDENGGNVGFDKKVWEIVEHKKGETPSI---TFKCHSH 561



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 118/396 (29%), Positives = 192/396 (48%), Gaps = 35/396 (8%)

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
            P +  +N ++    K    S A      +  K + PD+I+ N L+  +C  G I   F 
Sbjct: 56  TPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFS 115

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
           +  ++  R   P  VT NTLI GLC  G ++ A    + ++ QG   + ++Y  ++NG C
Sbjct: 116 VLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVC 175

Query: 465 KMGN-----------------------------------LSMAREFFNEMLRKGLQPDRF 489
           K+G+                                   +S A   F+EM  KG+  D  
Sbjct: 176 KIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVV 235

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
            Y+T I G    G   EA  L  EM+ K   P++ TYN+LV  LCK G ++EA  +L  M
Sbjct: 236 TYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVM 295

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRL 609
           +     PD ITY++++     + ++++ + +FN M   G++P + TYT+LI+       +
Sbjct: 296 LKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMV 355

Query: 610 ELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL 669
           + A   F EM  K + P ++TY++LI+GLC+  RI   + L  +M + G   N  TY+ L
Sbjct: 356 DEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSL 415

Query: 670 INENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           I+  C  G+   A+ L+ +M D+ I P+  T + LL
Sbjct: 416 IDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILL 451



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 102/342 (29%), Positives = 178/342 (52%)

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           V DA  +F  ML     P II +N +L  + +  +   A  L   L  + + P ++T N 
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           LI+  C  G +     +   ++ +G  PD +T   ++ G C  G +  A  F +++L +G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
            Q ++ +Y T I G  K+GDT  A +L +++  +   P+++ Y+ ++  LCK   + EA 
Sbjct: 160 FQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAY 219

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
            L  +M   G   D +TY+++I+     G L+    L N M+ K ++P + TY +L+ A 
Sbjct: 220 GLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
              G+++ A    + M    ++P+VITY+ L++G   +  + +A  +F  M   G+ P+ 
Sbjct: 280 CKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDV 339

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +TYTILIN  C      EAL L+KEM  + + P   T+S+L+
Sbjct: 340 HTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLI 381



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 134/248 (54%), Gaps = 2/248 (0%)

Query: 447  QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSE 506
            +GI PD+ T  I++N  C MG ++       ++L++G  PD   +TT I G    G  ++
Sbjct: 955  KGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNK 1014

Query: 507  AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
            A    +++LA+GF  + ++Y  L++G+CK+G    A +LLRK+ G    PD + Y +II 
Sbjct: 1015 ALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIID 1074

Query: 567  ASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRP 626
            A  +   + +   LF  M  KG+S  +VTY  LI+     G+L+ A    ++M +K I P
Sbjct: 1075 ALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINP 1134

Query: 627  NVITYNALINGLCRLRR--IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
            NV TYN L++ LC+  +  +D++  +   ME+ G   N  T+ I+I+         +  +
Sbjct: 1135 NVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEK 1194

Query: 685  LYKEMLDR 692
            L  EM+ R
Sbjct: 1195 LLHEMIAR 1202



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 135/260 (51%), Gaps = 2/260 (0%)

Query: 332  ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
            A++L   +  +G+ P L T NILI   C  G+++       ++L++   PD I++ TL+ 
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 392  GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
            G C  G + +A    D+L ++      V+Y TLI+G+C+ GD   A +L   +  +   P
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 452  DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
            DV+ Y  +++  CK   +S A   F EM  KG+  D   Y T I G   +G   EA  L 
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124

Query: 512  EEMLAKGFPPDLITYNVLVHGLCKLGS--LEEANELLRKMVGDGFIPDHITYTSIIHASL 569
             +M+ K   P++ TYN+LV  LCK G   L+E+  +L KM  +G   + +T+  II A  
Sbjct: 1125 NKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALF 1184

Query: 570  EMGDLRRGRDLFNNMLRKGL 589
            E  +  +   L + M+ +GL
Sbjct: 1185 EKDENDKVEKLLHEMIARGL 1204



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 130/249 (52%), Gaps = 2/249 (0%)

Query: 238  GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
            GI+P + T N +++ FC  G++     +L ++  RG  P+ +T+  LI G    G++ +A
Sbjct: 956  GIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKA 1015

Query: 298  RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
                  +L  G +++  SY  +I G  + G    A+ L  ++  R   P +  YN +I  
Sbjct: 1016 LHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDA 1075

Query: 358  LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
            LCK   VS A   FFEM  K +  D+++YNTL+YG+C  G + EA  L +++  + + P 
Sbjct: 1076 LCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPN 1135

Query: 418  VVTYNTLIDGLCRYGD--LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
            V TYN L+D LC+ G   L+ +  +   M + G   + +T+ I+++   +        + 
Sbjct: 1136 VRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKL 1195

Query: 476  FNEMLRKGL 484
             +EM+ +GL
Sbjct: 1196 LHEMIARGL 1204



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 133/261 (50%), Gaps = 2/261 (0%)

Query: 402  AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
            A  L   L  + + P + T N LI+  C  G +     +   ++ +G  PD IT+T ++N
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 462  GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
            G C  G ++ A  F +++L +G Q ++ +Y T I G  K+GDT  A +L  ++  +   P
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 522  DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
            D++ YN ++  LCK   + +A  L  +M   G   D +TY ++I+    +G L+    L 
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124

Query: 582  NNMLRKGLSPTLVTYTVLIHAHAARGR--LELAFMYFSEMQVKGIRPNVITYNALINGLC 639
            N M+ K ++P + TY +L+ A    G+  L+ +    S+M+  G + N +T+  +I+ L 
Sbjct: 1125 NKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALF 1184

Query: 640  RLRRIDQAYGLFIDMEEEGIL 660
                 D+   L  +M   G+L
Sbjct: 1185 EKDENDKVEKLLHEMIARGLL 1205



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 123/249 (49%), Gaps = 2/249 (0%)

Query: 466  MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
            M + S A    + +  KG+QPD F     I     +G  +  + +  ++L +G+ PD IT
Sbjct: 939  MKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTIT 998

Query: 526  YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
            +  L++GLC  G + +A     K++  GF  + ++Y ++I+   ++GD R    L   + 
Sbjct: 999  FTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKID 1058

Query: 586  RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
             +   P +V Y  +I A      +  A+  F EM VKGI  +V+TYN LI G C + ++ 
Sbjct: 1059 GRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLK 1118

Query: 646  QAYGLFIDMEEEGILPNKYTYTILINENCNAGN--WQEALRLYKEMLDREIEPDYCTHSA 703
            +A GL   M  + I PN  TY IL++  C  G     E+L +  +M D   + +  T   
Sbjct: 1119 EAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEI 1178

Query: 704  LLLKQLDKD 712
            ++    +KD
Sbjct: 1179 IISALFEKD 1187



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 96/188 (51%)

Query: 176  LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
            L++L+  +     +     +  K+L+ G  PD      +I  L   G   KA   +  + 
Sbjct: 964  LNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLL 1023

Query: 236  EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
              G + + V+Y T+++  CK G+ + A++LL ++ GR   P+ V YN +I    ++  + 
Sbjct: 1024 AQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVS 1083

Query: 296  QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
            +A GL  +M   G+     +YN +I G+   G L EA+ L  +MV + + P + TYNIL+
Sbjct: 1084 KAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILV 1143

Query: 356  YGLCKWGR 363
              LCK G+
Sbjct: 1144 DALCKEGK 1151


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 165/524 (31%), Positives = 248/524 (47%), Gaps = 38/524 (7%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           PD      II+ L D G   +A  +   M   G +PS+VTY  +L++ CK     +A+E+
Sbjct: 143 PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEV 202

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG--- 322
           L EM+ +GC+PN VTYNV+I G  R G ++ AR  +  +   G +    SY  ++ G   
Sbjct: 203 LDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCA 262

Query: 323 --------------------------------YSEKGLLVEALNLEEEMVTRGVAPTLAT 350
                                           +   G++  A+ + E+M   G A     
Sbjct: 263 AKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTL 322

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
            NI+I  +CK GRV DA      M      PD ISY T+L G CR+    +A  L  E+ 
Sbjct: 323 CNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMV 382

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
            +N  P  VT+NT I  LC+ G +E A  L E M   G   +++TY  +VNG C  G + 
Sbjct: 383 RKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVD 442

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            A E F  M  K   P+   YTT + G         A  L  EML K   P+++T+NVLV
Sbjct: 443 SALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLV 499

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
              C+ G ++EA EL+ +M+  G  P+ ITY +++    +  +     +L + ++  G+S
Sbjct: 500 SFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVS 559

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           P +VTY+ +I   +   R+E A   F  +Q  G+RP  + YN ++  LC+    D A   
Sbjct: 560 PDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDF 619

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           F  M   G +PN+ TY  LI    N    +E   L +E+  R +
Sbjct: 620 FAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663



 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 157/524 (29%), Positives = 258/524 (49%), Gaps = 7/524 (1%)

Query: 182 IYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKP 241
           +  +  + E   LV ++    G  PDV  C ++I+ L   G +  A  V R     G   
Sbjct: 53  LIARDDLAEAARLV-DRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAV 111

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
            +  YNT++  +C+ G++  A  L+  M     +P+  TY  +I G    G + +A  L+
Sbjct: 112 DVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLL 168

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
            DML  G + S  +Y  ++    +     +A+ + +EM  +G  P + TYN++I G+C+ 
Sbjct: 169 DDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCRE 228

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           GRV DAR     +      PD +SY T+L G C +    +   LF E+  +N +P  VT+
Sbjct: 229 GRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTF 288

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           + L+   CR G +E A Q+ E M   G   +     I++N  CK G +  A +F N M  
Sbjct: 289 DMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGS 348

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
            G  PD  +YTT + G  +     +A  L +EM+ K  PP+ +T+N  +  LC+ G +E+
Sbjct: 349 YGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQ 408

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A  L+ +M   G   + +TY ++++     G +    +LF +M  K   P  +TYT L+ 
Sbjct: 409 ATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLT 465

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
                 RL+ A    +EM  K   PNV+T+N L++  C+   +D+A  L   M E G  P
Sbjct: 466 GLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTP 525

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           N  TY  L++      N +EAL L   ++   + PD  T+S+++
Sbjct: 526 NLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSII 569



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 142/493 (28%), Positives = 244/493 (49%), Gaps = 7/493 (1%)

Query: 213 RIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR 272
           R+ +++  +  +  AR V R     G  P +     ++ + C+ G   +A  +L   +  
Sbjct: 49  RLRRLIARDDLAEAARLVDRATSR-GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERS 107

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA 332
           G + +   YN L+ G+ R G+L+ AR LI  M    +   A++Y PII G  ++G + EA
Sbjct: 108 GTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEA 164

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
           L+L ++M+ RG  P++ TY +L+  +CK      A     EM  K   P+I++YN ++ G
Sbjct: 165 LSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIING 224

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
            CR G + +A    + L S    P  V+Y T++ GLC     E  ++L   M+ +  +P+
Sbjct: 225 MCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPN 284

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
            +T+ ++V   C+ G +  A +   +M   G   +       I    K G   +A++   
Sbjct: 285 EVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLN 344

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
            M + G  PD I+Y  ++ GLC+    E+A ELL++MV     P+ +T+ + I    + G
Sbjct: 345 NMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKG 404

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
            + +   L   M   G    +VTY  L++    +GR++ A   F  M  K   PN ITY 
Sbjct: 405 LIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYT 461

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
            L+ GLC   R+D A  L  +M ++   PN  T+ +L++  C  G   EA+ L ++M++ 
Sbjct: 462 TLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEH 521

Query: 693 EIEPDYCTHSALL 705
              P+  T++ LL
Sbjct: 522 GCTPNLITYNTLL 534



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 143/478 (29%), Positives = 224/478 (46%), Gaps = 6/478 (1%)

Query: 247 NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
           N  L       ++ EA  L+     RG +P+      LI    R G    A  ++R   +
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
            G  V   +YN ++ GY   G L  A  L   M    VAP   TY  +I GLC  GRV +
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGE 163

Query: 367 ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
           A     +ML +   P +++Y  LL   C+S   G+A  + DE+R++   P +VTYN +I+
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223

Query: 427 GLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
           G+CR G ++ A++    + + G  PD ++YT ++ G C         E F EM+ K   P
Sbjct: 224 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMP 283

Query: 487 DRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
           +   +   +    + G    A ++ E+M   G   +    N++++ +CK G +++A + L
Sbjct: 284 NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFL 343

Query: 547 RKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAAR 606
             M   G  PD I+YT+++            ++L   M+RK   P  VT+   I     +
Sbjct: 344 NNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQK 403

Query: 607 GRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
           G +E A M   +M   G   N++TYNAL+NG C   R+D A  LF  M  +   PN  TY
Sbjct: 404 GLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITY 460

Query: 667 TILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           T L+   CNA     A  L  EML ++  P+  T + L+     K     A+E +E +
Sbjct: 461 TTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQM 518



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 165/345 (47%), Gaps = 3/345 (0%)

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           PD+     L+   CR G   +A  +            V  YNTL+ G CRYG L+ A++L
Sbjct: 76  PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRL 135

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
             +M    + PD  TYT ++ G C  G +  A    ++ML +G QP    YT  +    K
Sbjct: 136 IASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCK 192

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
                +A  + +EM AKG  P+++TYNV+++G+C+ G +++A E L ++   GF PD ++
Sbjct: 193 STGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVS 252

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           YT+++             +LF  M+ K   P  VT+ +L+      G +E A     +M 
Sbjct: 253 YTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMS 312

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
             G   N    N +IN +C+  R+D A+    +M   G  P+  +YT ++   C A  W+
Sbjct: 313 GHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWE 372

Query: 681 EALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
           +A  L KEM+ +   P+  T +  +     K     A   +E ++
Sbjct: 373 DAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS 417


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 146/462 (31%), Positives = 238/462 (51%), Gaps = 3/462 (0%)

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           V  N  L    + GE++E  + L +M  RG  P+ +    LI G  + G+  +A  ++  
Sbjct: 111 VENNNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEI 170

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           +   G      +YN +I GY + G +  AL L + M    V+P + TYN ++  LC  G+
Sbjct: 171 LEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGK 227

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           + +A       +++   PD+I+Y  L+   C+   +G+A  L DE+R +   P VVTYN 
Sbjct: 228 LKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNV 287

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           LI+G+C+ G L+ A +   +M + G  P+VIT+ I++   C  G    A +F  EM+RKG
Sbjct: 288 LINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKG 347

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
             P    +   I    + G    A  + E+M   G  P+ ++YN L+H LCK   +E A 
Sbjct: 348 CSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAI 407

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
           E L  MV  G  PD +TY +++ A  + G +    ++ N +  KG SP L+TY  +I   
Sbjct: 408 EYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGL 467

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
           +  G+ + A     EM+ KG++P++ITY+ L+ GL R  ++D+A   F D+EE G+ PN 
Sbjct: 468 SKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNA 527

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            TY  ++   C A     A+     M+ R  +P   ++  L+
Sbjct: 528 ITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILI 569



 Score =  248 bits (634), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 144/492 (29%), Positives = 249/492 (50%), Gaps = 12/492 (2%)

Query: 207 DVKNCNRIIKVLRDN----GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           +V+N N + +++R+     GF      V R     G  P I+   +++   CK G+  +A
Sbjct: 110 EVENNNHLRRLVRNGELEEGFKFLEDMVCR-----GDIPDIIACTSLIRGLCKTGKTWKA 164

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
             ++  ++  G  P+ +TYNVLI+G+ + GE+  A  L+    ++ +     +YN I+  
Sbjct: 165 TRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLD---RMSVSPDVVTYNTILRT 221

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
             + G L EA+ + +  + R   P + TY ILI   CK   V  A     EM  K   PD
Sbjct: 222 LCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPD 281

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
           +++YN L+ G C+ G + EA    + + S    P V+T+N ++  +C  G    A++   
Sbjct: 282 VVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLA 341

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            MI +G  P V+T+ I++N  C+ G +  A +   +M + G  P+  +Y   +    K  
Sbjct: 342 EMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDK 401

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
               A    + M+++G  PD++TYN L+  LCK G ++ A E+L ++   G  P  ITY 
Sbjct: 402 KMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYN 461

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
           ++I    ++G       L + M  KGL P ++TY+ L+   +  G+++ A  +F +++  
Sbjct: 462 TVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEM 521

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
           G++PN ITYN+++ GLC+ R+  +A      M   G  P + +Y ILI      G  +EA
Sbjct: 522 GVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEA 581

Query: 683 LRLYKEMLDREI 694
           L L  E+  R +
Sbjct: 582 LELLNELCSRGV 593



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 154/516 (29%), Positives = 242/516 (46%), Gaps = 49/516 (9%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV------------------ 230
           +E+       M+  G +PD+  C  +I+ L   G + KA  V                  
Sbjct: 126 LEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNV 185

Query: 231 ----YRMMGEFG----------IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSP 276
               Y   GE G          + P +VTYNT+L + C  G+++EA+E+L     R C P
Sbjct: 186 LISGYCKTGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYP 245

Query: 277 NGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLE 336
           + +TY +LI    +   + QA  L+ +M   G K    +YN +I G  ++G L EA+   
Sbjct: 246 DVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFL 305

Query: 337 EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS 396
             M + G  P + T+NI++  +C  GR  DA     EM+RK   P ++++N L+   CR 
Sbjct: 306 NHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRK 365

Query: 397 GNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
           G IG A  + +++      P  ++YN L+  LC+   +E A +  + M+++G  PD++TY
Sbjct: 366 GLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTY 425

Query: 457 TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA 516
             ++   CK G + +A E  N++  KG  P    Y T I G  K+G T +A +L +EM  
Sbjct: 426 NTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKG 485

Query: 517 KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
           KG  PD+ITY+ LV GL + G ++EA      +   G  P+ ITY SI+    +     R
Sbjct: 486 KGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVR 545

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV-------- 628
             D    M+ +G  PT  +Y +LI   A  G  + A    +E+  +G+            
Sbjct: 546 AIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVVVK 605

Query: 629 ITYNA---------LINGLCRLRRIDQAYGLFIDME 655
           I +N          L NGL   R I    G F+ +E
Sbjct: 606 IPFNVFYFYFLLHLLFNGLGSHREIFVGVGFFMILE 641



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/436 (28%), Positives = 207/436 (47%), Gaps = 49/436 (11%)

Query: 120 VKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLL 179
           V  D   + TIL  L +SG L+ A                             +++LD  
Sbjct: 208 VSPDVVTYNTILRTLCDSGKLKEA-----------------------------MEVLD-- 236

Query: 180 LLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGI 239
                 + M  +C             PDV     +I+         +A ++   M + G 
Sbjct: 237 ------RQMQREC------------YPDVITYTILIEATCKESGVGQAMKLLDEMRDKGC 278

Query: 240 KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
           KP +VTYN +++  CKEG + EA+  L  M   GC PN +T+N+++      G    A  
Sbjct: 279 KPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEK 338

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
            + +M++ G   S  ++N +I     KGL+  A+++ E+M   G  P   +YN L++ LC
Sbjct: 339 FLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALC 398

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
           K  ++  A      M+ +   PDI++YNTLL   C+ G +  A  + ++L S+   P ++
Sbjct: 399 KDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLI 458

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
           TYNT+IDGL + G  + A +L + M  +G+ PD+ITY+ +V G  + G +  A  FF+++
Sbjct: 459 TYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDL 518

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
              G++P+   Y + + G  K   T  A      M+A+G  P   +Y +L+ GL   G  
Sbjct: 519 EEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLA 578

Query: 540 EEANELLRKMVGDGFI 555
           +EA ELL ++   G +
Sbjct: 579 KEALELLNELCSRGVV 594


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 157/550 (28%), Positives = 283/550 (51%), Gaps = 7/550 (1%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM--G 235
           LL  +Y  K   +   L+ ++M   G+ PD  + N ++K L ++  S +A ++   M   
Sbjct: 160 LLKCLYHAKRSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKK 219

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
             G  P++VTYNT++    +EGE+ +A  L  EM  +G  P+ VTY  +I    +   ++
Sbjct: 220 SGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMD 279

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
           +A  ++R M+  G + +  +YN +I GYS  G   E   +  EM ++G+ P + T N  +
Sbjct: 280 KAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYM 339

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
             LCK G+  +A   F  M  K   P++++Y+ LL+GY   G   +   LF+ +    +V
Sbjct: 340 SSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIV 399

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
                +N +ID   + G ++    +   M  QG++PD  TY I++    +MG L+ A + 
Sbjct: 400 ADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDK 459

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP-PDLITYNVLVHGLC 534
           FN+M+  GL+P+   Y + I G    G+  +A  L  EM+++G P P+++ +N +++ LC
Sbjct: 460 FNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLC 519

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           K G + EA+++   ++  G  PD IT+ S+I     +G + +   + + M+  G+ P +V
Sbjct: 520 KEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVV 579

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           +Y  LI  +   GR++   + F EM  KG++P  ITY  +++GL    R   A  +  +M
Sbjct: 580 SYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEM 639

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYK 714
            E G   +  T  I++   C      EA+ ++K++    ++ +     A++   +D  YK
Sbjct: 640 IESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNI----AIINTMIDAMYK 695

Query: 715 VHAVEYLESL 724
           V   E  + L
Sbjct: 696 VRKREEAKEL 705



 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 152/589 (25%), Positives = 291/589 (49%), Gaps = 18/589 (3%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           GV+ D   + T+++ L E    + A  ++ T+V  +          GG S  V +    +
Sbjct: 185 GVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKS----------GGCSPNV-VTYNTV 233

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           +  ++ +  + + C L F++M++ G++PDV     II  L       KA  V R M   G
Sbjct: 234 IHGLFREGEVSKACNL-FHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNG 292

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
            +P+ VTYN M+  +   G+ +E   +  EM  +G  PN VT N  ++   ++G+ ++A 
Sbjct: 293 FQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAA 352

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
                M   G K +  +Y+ ++ GY+ +G  V+ LNL   M   G+      +NI+I   
Sbjct: 353 EFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAY 412

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
            K G + +    F +M  + VIPD  +Y  ++  + R G + +A   F+++ +  L P  
Sbjct: 413 GKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEG 472

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGI-LPDVITYTIMVNGSCKMGNLSMAREFFN 477
           + Y++LI G C +G+L  A++L   M+++GI  P+++ +  ++N  CK G +  A + F+
Sbjct: 473 IVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFD 532

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            ++  G +PD   + + I G   +G   +A+ + + M++ G  PD+++YN L+ G C+ G
Sbjct: 533 FVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNG 592

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            +++   L  +M+  G  P  ITY  I+H     G     + + + M+  G +  + T  
Sbjct: 593 RIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCG 652

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           +++         + A   F ++    ++ N+   N +I+ + ++R+ ++A  LF  +   
Sbjct: 653 IILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISAT 712

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
           G++PN  TY ++I      G+ +EA  ++  M     E   C  S+ LL
Sbjct: 713 GLVPNASTYGVMIKNLLKEGSVEEADNMFSLM-----EKSGCAPSSRLL 756



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 147/508 (28%), Positives = 250/508 (49%), Gaps = 19/508 (3%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   +++  LV  +M+ NG  P+    N +I     +G   +   ++R M   G+ P+IV
Sbjct: 274 KARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIV 333

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           T N+ + S CK G+ +EA E    M  +G  PN VTY+VL+ G++  G       L   M
Sbjct: 334 TCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSM 393

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
              G+      +N +I  Y ++G++ E + +  +M  +GV P   TY I+I    + GR+
Sbjct: 394 EGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRL 453

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV-PTVVTYNT 423
           +DA  +F +M+   + P+ I Y++L+ G+C  GN+ +A  L  E+ SR +  P +V +N+
Sbjct: 454 ADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNS 513

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           +I+ LC+ G +  A  + + +I+ G  PDVIT+  +++G   +G +  A    + M+  G
Sbjct: 514 IINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAG 573

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           ++PD  +Y T I G  + G   +   L  EML+KG  P  ITY +++HGL   G    A 
Sbjct: 574 IEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAK 633

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR------DLFNNMLRKGLSPTLVTYT 597
           ++  +M+  G   D I+   II     +G L R         +F  +    +   +    
Sbjct: 634 KMCHEMIESGTTMD-ISTCGII-----LGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIIN 687

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
            +I A     + E A   F  +   G+ PN  TY  +I  L +   +++A  +F  ME+ 
Sbjct: 688 TMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKS 747

Query: 658 GILPNK----YTYTILI--NENCNAGNW 679
           G  P+     Y   +L+   E   AGN+
Sbjct: 748 GCAPSSRLLNYIIRVLLEKGEIVKAGNY 775



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/504 (26%), Positives = 245/504 (48%), Gaps = 39/504 (7%)

Query: 241 PSIVTYNTMLDSFCKEGE-----------MQEALE------------------------- 264
           P++ TYN ++D  C+              ++  L+                         
Sbjct: 117 PTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNL 176

Query: 265 LLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL--GLKVSAHSYNPIICG 322
           LL  M   G  P+ ++YN ++     +   ++A  L+  M+K   G   +  +YN +I G
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHG 236

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
              +G + +A NL  EM+ +GV P + TY  +I  LCK   +  A     +M+     P+
Sbjct: 237 LFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPN 296

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
            ++YN +++GY  SG   E   +F E+ S+ L+P +VT N+ +  LC++G  + A +  +
Sbjct: 297 KVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFD 356

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
           +M  +G  P+++TY+++++G    G        FN M   G+  D+  +   I    K G
Sbjct: 357 SMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRG 416

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
              E   +  +M  +G  PD  TY +++    ++G L +A +   +M+  G  P+ I Y 
Sbjct: 417 MMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYH 476

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLS-PTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
           S+I      G+L + ++L + M+ +G+  P +V +  +I++    GR+  A   F  +  
Sbjct: 477 SLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIH 536

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
            G RP+VIT+N+LI+G   + +I++A+G+   M   GI P+  +Y  LI+  C  G   +
Sbjct: 537 IGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDD 596

Query: 682 ALRLYKEMLDREIEPDYCTHSALL 705
            L L+ EML + ++P   T+  +L
Sbjct: 597 GLILFGEMLSKGVKPTTITYGIIL 620



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 142/508 (27%), Positives = 237/508 (46%), Gaps = 45/508 (8%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTY-------- 246
           +F +M   GL+P++  CN  +  L  +G S +A E +  M   G KP++VTY        
Sbjct: 319 MFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYA 378

Query: 247 ---------------------------NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGV 279
                                      N ++D++ K G M E + +  +MQ +G  P+  
Sbjct: 379 TEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDAC 438

Query: 280 TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
           TY ++I  FSR G L  A      M+ +GLK     Y+ +I G+   G LV+A  L  EM
Sbjct: 439 TYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEM 498

Query: 340 VTRGVA-PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
           ++RG+  P +  +N +I  LCK GRV +A   F  ++     PD+I++N+L+ GY   G 
Sbjct: 499 MSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGK 558

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           I +AF + D + S  + P VV+YNTLIDG CR G ++    L   M+++G+ P  ITY I
Sbjct: 559 IEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGI 618

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           +++G    G    A++  +EM+  G   D       + G  +     EA  + +++ A  
Sbjct: 619 ILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMN 678

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
              ++   N ++  + K+   EEA EL   +   G +P+  TY  +I   L+ G +    
Sbjct: 679 VKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEAD 738

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           ++F+ M + G +P+      +I     +G +  A  Y  ++  K I     T + L+   
Sbjct: 739 NMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFKVDGKRISLEASTVSLLMALF 798

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTY 666
            R  +           E+  +LP KY +
Sbjct: 799 SREGKY---------WEDVKLLPAKYQF 817



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 140/477 (29%), Positives = 219/477 (45%), Gaps = 39/477 (8%)

Query: 268 EMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII-CGYSEK 326
           E + R   P   TYN+L+    R         L    LK GLK+     + ++ C Y  K
Sbjct: 109 EARPRVALPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAK 168

Query: 327 GLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN--VIPDII 384
                   L   M   GV P   +YN ++  LC+  R   A      M++K+    P+++
Sbjct: 169 RSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVV 228

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
           +YNT+++G  R G + +A  LF E+  + +VP VVTY ++ID LC+   ++ A+ +   M
Sbjct: 229 TYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQM 288

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
           I+ G  P+ +TY  M++G    G        F EM  +GL P+     + ++   K G +
Sbjct: 289 ISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKS 348

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLC------------------------------ 534
            EA    + M AKG  P+L+TY+VL+HG                                
Sbjct: 349 KEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIV 408

Query: 535 -----KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
                K G ++E   +  +M   G IPD  TY  +I A   MG L    D FN M+  GL
Sbjct: 409 IDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGL 468

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI-RPNVITYNALINGLCRLRRIDQAY 648
            P  + Y  LI      G L  A    SEM  +GI RPN++ +N++IN LC+  R+ +A+
Sbjct: 469 KPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAH 528

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            +F  +   G  P+  T+  LI+     G  ++A  +   M+   IEPD  +++ L+
Sbjct: 529 DIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLI 585



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 175/396 (44%), Gaps = 38/396 (9%)

Query: 337 EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK------------------- 377
           EE   R   PT+ TYNIL+   C+  R +     F   L+                    
Sbjct: 108 EEARPRVALPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHA 167

Query: 378 -----------------NVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL--RSRNLVPTV 418
                             V PD ISYNT++   C       A  L   +  +S    P V
Sbjct: 168 KRSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNV 227

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           VTYNT+I GL R G++  A  L   M+ QG++PDV+TYT +++  CK   +  A     +
Sbjct: 228 VTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQ 287

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M+  G QP++  Y   I G    G   E   +  EM ++G  P+++T N  +  LCK G 
Sbjct: 288 MISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGK 347

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
            +EA E    M   G  P+ +TY+ ++H     G      +LFN+M   G+      + +
Sbjct: 348 SKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNI 407

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           +I A+  RG ++   + F++MQ +G+ P+  TY  +I    R+ R+  A   F  M   G
Sbjct: 408 VIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMG 467

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           + P    Y  LI   C  GN  +A  L  EM+ R I
Sbjct: 468 LKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGI 503



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/390 (27%), Positives = 176/390 (45%), Gaps = 50/390 (12%)

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE-------AFLLF-----DELRSRN 413
           DA H F E+LR+ +     S N       R+ +          A  LF     +E R R 
Sbjct: 55  DAHHLFDELLRQTIPVPERSLNGFFTALARAPSSAACRDGPSLAVALFNRICREEARPRV 114

Query: 414 LVPTVVTYNTLIDGLCR----------YGDL--------------------------EVA 437
            +PTV TYN L+D  CR          +G                            +V 
Sbjct: 115 ALPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVV 174

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK--GLQPDRFAYTTQI 495
             L   M   G+ PD I+Y  +V   C+      A +  + M++K  G  P+   Y T I
Sbjct: 175 NLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVI 234

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
            G  + G+ S+A  L  EM+ +G  PD++TY  ++  LCK  ++++A  +LR+M+ +GF 
Sbjct: 235 HGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQ 294

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           P+ +TY  +IH     G  +    +F  M  +GL P +VT    + +    G+ + A  +
Sbjct: 295 PNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEF 354

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
           F  M  KG +PN++TY+ L++G            LF  ME  GI+ ++  + I+I+    
Sbjct: 355 FDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGK 414

Query: 676 AGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            G   E + ++ +M ++ + PD CT+  ++
Sbjct: 415 RGMMDETMLIFTQMQEQGVIPDACTYGIVI 444



 Score = 43.5 bits (101), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 30/129 (23%), Positives = 64/129 (49%)

Query: 165 GGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS 224
           G ++   +I I++ ++    K    E+   +F+ +   GL+P+      +IK L   G  
Sbjct: 675 GAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSV 734

Query: 225 VKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVL 284
            +A  ++ +M + G  PS    N ++    ++GE+ +A   ++++ G+  S    T ++L
Sbjct: 735 EEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFKVDGKRISLEASTVSLL 794

Query: 285 ITGFSRNGE 293
           +  FSR G+
Sbjct: 795 MALFSREGK 803


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 165/524 (31%), Positives = 248/524 (47%), Gaps = 38/524 (7%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           PD      II+ L D G   +A  +   M   G +PS+VTY  +L++ CK     +A+E+
Sbjct: 174 PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEV 233

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG--- 322
           L EM+ +GC+PN VTYNV+I G  R G ++ AR  +  +   G +    SY  ++ G   
Sbjct: 234 LDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCA 293

Query: 323 --------------------------------YSEKGLLVEALNLEEEMVTRGVAPTLAT 350
                                           +   G++  A+ + E+M   G A     
Sbjct: 294 AKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTL 353

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
            NI+I  +CK GRV DA      M      PD ISY T+L G CR+    +A  L  E+ 
Sbjct: 354 CNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMV 413

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
            +N  P  VT+NT I  LC+ G +E A  L E M   G   +++TY  +VNG C  G + 
Sbjct: 414 RKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVD 473

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            A E F  M  K   P+   YTT + G         A  L  EML K   P+++T+NVLV
Sbjct: 474 SALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLV 530

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
              C+ G ++EA EL+ +M+  G  P+ ITY +++    +  +     +L + ++  G+S
Sbjct: 531 SFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVS 590

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           P +VTY+ +I   +   R+E A   F  +Q  G+RP  + YN ++  LC+    D A   
Sbjct: 591 PDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDF 650

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           F  M   G +PN+ TY  LI    N    +E   L +E+  R +
Sbjct: 651 FAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 694



 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 154/511 (30%), Positives = 253/511 (49%), Gaps = 6/511 (1%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           + ++    G  PDV  C ++I+ L   G +  A  V R     G    +  YNT++  +C
Sbjct: 96  LVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYC 155

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           + G++  A  L+  M     +P+  TY  +I G    G + +A  L+ DML  G + S  
Sbjct: 156 RYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVV 212

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +Y  ++    +     +A+ + +EM  +G  P + TYN++I G+C+ GRV DAR     +
Sbjct: 213 TYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRL 272

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
                 PD +SY T+L G C +    +   LF E+  +N +P  VT++ L+   CR G +
Sbjct: 273 SSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMV 332

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           E A Q+ E M   G   +     I++N  CK G +  A +F N M   G  PD  +YTT 
Sbjct: 333 ERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTV 392

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           + G  +     +A  L +EM+ K  PP+ +T+N  +  LC+ G +E+A  L+ +M   G 
Sbjct: 393 LKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGC 452

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
             + +TY ++++     G +    +LF +M  K   P  +TYT L+       RL+ A  
Sbjct: 453 EVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAE 509

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
             +EM  K   PNV+T+N L++  C+   +D+A  L   M E G  PN  TY  L++   
Sbjct: 510 LLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGIT 569

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
              N +EAL L   ++   + PD  T+S+++
Sbjct: 570 KDCNSEEALELLHGLVSNGVSPDIVTYSSII 600



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 140/463 (30%), Positives = 219/463 (47%), Gaps = 6/463 (1%)

Query: 262 ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC 321
           A  L+     RG +P+      LI    R G    A  ++R   + G  V   +YN ++ 
Sbjct: 93  AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           GY   G L  A  L   M    VAP   TY  +I GLC  GRV +A     +ML +   P
Sbjct: 153 GYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQP 209

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
            +++Y  LL   C+S   G+A  + DE+R++   P +VTYN +I+G+CR G ++ A++  
Sbjct: 210 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 269

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
             + + G  PD ++YT ++ G C         E F EM+ K   P+   +   +    + 
Sbjct: 270 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRG 329

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
           G    A ++ E+M   G   +    N++++ +CK G +++A + L  M   G  PD I+Y
Sbjct: 330 GMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISY 389

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
           T+++            ++L   M+RK   P  VT+   I     +G +E A M   +M  
Sbjct: 390 TTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSE 449

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
            G   N++TYNAL+NG C   R+D A  LF  M  +   PN  TYT L+   CNA     
Sbjct: 450 HGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDA 506

Query: 682 ALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           A  L  EML ++  P+  T + L+     K     A+E +E +
Sbjct: 507 AAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQM 549



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 165/345 (47%), Gaps = 3/345 (0%)

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           PD+     L+   CR G   +A  +            V  YNTL+ G CRYG L+ A++L
Sbjct: 107 PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRL 166

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
             +M    + PD  TYT ++ G C  G +  A    ++ML +G QP    YT  +    K
Sbjct: 167 IASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCK 223

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
                +A  + +EM AKG  P+++TYNV+++G+C+ G +++A E L ++   GF PD ++
Sbjct: 224 STGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVS 283

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           YT+++             +LF  M+ K   P  VT+ +L+      G +E A     +M 
Sbjct: 284 YTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMS 343

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
             G   N    N +IN +C+  R+D A+    +M   G  P+  +YT ++   C A  W+
Sbjct: 344 GHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWE 403

Query: 681 EALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
           +A  L KEM+ +   P+  T +  +     K     A   +E ++
Sbjct: 404 DAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS 448



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 65/149 (43%), Gaps = 3/149 (2%)

Query: 576 RGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALI 635
           R   L +    +G +P +   T LI     RGR   A       +  G   +V  YN L+
Sbjct: 92  RAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 151

Query: 636 NGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIE 695
            G CR  ++D A  L   M    + P+ YTYT +I   C+ G   EAL L  +ML R  +
Sbjct: 152 AGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQ 208

Query: 696 PDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           P   T++ LL           A+E L+ +
Sbjct: 209 PSVVTYTVLLEAVCKSTGFGQAMEVLDEM 237


>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
          Length = 806

 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 168/595 (28%), Positives = 273/595 (45%), Gaps = 77/595 (12%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE------------------ 236
            F  +   G  P +K CN  ++ L   G    AREV+  M E                  
Sbjct: 172 AFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMIKAL 231

Query: 237 ------------------FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNG 278
                              G++P++VTYN ++D+ CK G ++EA  L   M+  G +P+ 
Sbjct: 232 CKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSV 291

Query: 279 VTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
           VT+ +LI G +R     +   ++++M +LG+  +   YN +I  +  KG   +AL L +E
Sbjct: 292 VTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDE 351

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDA----------------------------RHR 370
           MV + + PT  TYN++   LCK G +  A                            R R
Sbjct: 352 MVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTR 411

Query: 371 FFE--------MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
             E        M+ + + P+       +   C+ G   EA  ++ +  ++ L   + T N
Sbjct: 412 RLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSN 471

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            LI GLC    ++ A ++ + M+N+GI  D ITY IM+ G CK   +  A +   +M R+
Sbjct: 472 ALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRR 531

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G +PD F + T +     LG   E + L ++M  +G  PD+++Y  ++ G CK   + +A
Sbjct: 532 GFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKA 591

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            E L +++  G  P+   Y ++I      GD+    D    M   G+ PT VTY  L++ 
Sbjct: 592 KEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYW 651

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
               G +E A   FS+ +   +   VI Y  +I G C+L ++ +A   F +M   GI PN
Sbjct: 652 MCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPN 711

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLK-----QLDKD 712
           K TYT L+     +GN +EA +L+ EM+   + PD  T+  L+ +      LDKD
Sbjct: 712 KLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEVNSLDKD 766



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 147/531 (27%), Positives = 251/531 (47%), Gaps = 36/531 (6%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           ++L+    K   VE+   +  +M + G+ P V     +I  L       +   V + M +
Sbjct: 260 NVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQ 319

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G+ P+ V YN ++   C++G   +AL L  EM  +   P  VTYN++     + GE+E+
Sbjct: 320 LGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMER 379

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL-NLEEEMVTRGVAPT-------- 347
           A  ++ DML +G+ V    +N ++    ++   +E++ ++  EMVTRG+ P         
Sbjct: 380 AERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACM 439

Query: 348 ---------------------------LATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
                                      LAT N LI+GLC+   + +A      ML K + 
Sbjct: 440 RELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIE 499

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
            D I+YN ++ G C+   + EA  L  ++  R   P + T+NTL+   C  G +E    L
Sbjct: 500 LDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHL 559

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
            + M  +G+ PD+++Y  +++G CK  ++  A+E+  E++ +GL+P+ F Y   I G  +
Sbjct: 560 LDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGR 619

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
            GD S A    E M + G  P  +TY  L++ +C  G +EEA  +  +   +      I 
Sbjct: 620 NGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIG 679

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           YT +I    ++G +      F  M  +G+SP  +TYT L++A++  G  E A   F EM 
Sbjct: 680 YTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMV 739

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
             G+ P+ ITY  LI     +  +D+  G   ++    +  +   Y IL N
Sbjct: 740 GSGVIPDNITYGTLIARCSEVNSLDKDIGHTAELSSGALTKDDRMYNILSN 790



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 134/487 (27%), Positives = 250/487 (51%), Gaps = 2/487 (0%)

Query: 221 NGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM-QGRGCSPNGV 279
            G   +A + +R++   G  PSI T N  L++  + G++  A E+  EM + R  + N  
Sbjct: 163 QGSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEY 222

Query: 280 TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
           +Y  +I    + G+++    ++ ++ + GL+ +  +YN ++    + G + EA  L+  M
Sbjct: 223 SYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRM 282

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
              G+ P++ T+ ILI GL +  R  +      EM +  V P+ + YN L+  +CR G+ 
Sbjct: 283 EQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHC 342

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
            +A  LFDE+  + + PT VTYN +   LC+ G++E A+++ E+M++ G+      +  +
Sbjct: 343 SQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTV 402

Query: 460 VNGSC-KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           V     +   L       NEM+ +G++P+    T  +    K G   EA  +  + L KG
Sbjct: 403 VAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKG 462

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
              +L T N L+HGLC+   ++EA ++++ M+  G   D ITY  +I    +   +    
Sbjct: 463 LGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAI 522

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
            L  +M R+G  P L T+  L+HA+   G++E  F    +M+ +G++P++++Y  +I+G 
Sbjct: 523 KLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGH 582

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
           C+ + I +A     ++ + G+ PN + Y  LI      G+   A+   + M    I+P  
Sbjct: 583 CKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTN 642

Query: 699 CTHSALL 705
            T+ +L+
Sbjct: 643 VTYGSLM 649



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 129/481 (26%), Positives = 224/481 (46%), Gaps = 36/481 (7%)

Query: 194 LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
           +V  +M + G+ P+    N +I      G   +A  ++  M    +KP+ VTYN +  + 
Sbjct: 312 IVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKAL 371

Query: 254 CKEGEMQEALELL--------------------W----------------EMQGRGCSPN 277
           CKEGEM+ A  +L                    W                EM  RG  PN
Sbjct: 372 CKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPN 431

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
                  +    + G+ ++A G+    L  GL V+  + N +I G  E   + EA  + +
Sbjct: 432 DPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQ 491

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
            M+ +G+     TYNI+I G CK  ++ +A     +M R+   PD+ ++NTLL+ YC  G
Sbjct: 492 TMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLG 551

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
            + E F L D++++  L P +V+Y T+IDG C+  D+  A++    ++++G+ P+V  Y 
Sbjct: 552 KMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYN 611

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
            ++ G  + G++S A +    M   G+QP    Y + +      G   EA  +  +    
Sbjct: 612 ALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQAREN 671

Query: 518 GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
                +I Y +++ G CKLG + EA     +M   G  P+ +TYT++++A  + G+    
Sbjct: 672 NVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEA 731

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
             LF+ M+  G+ P  +TY  LI   +    L+    + +E+    +  +   YN L NG
Sbjct: 732 SKLFDEMVGSGVIPDNITYGTLIARCSEVNSLDKDIGHTAELSSGALTKDDRMYNILSNG 791

Query: 638 L 638
           +
Sbjct: 792 I 792



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 127/313 (40%), Gaps = 49/313 (15%)

Query: 116 TQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKI 175
           T+ G K D F F T+L                                            
Sbjct: 529 TRRGFKPDLFTFNTLLH------------------------------------------- 545

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
                  Y     +E+   + ++M   GL PD+ +   II          KA+E    + 
Sbjct: 546 ------AYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELM 599

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
           + G+KP++  YN ++  + + G++  A++ +  M+  G  P  VTY  L+      G +E
Sbjct: 600 DRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVE 659

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
           +A+ +     +  + +    Y  +I GY + G +VEA+   EEM +RG++P   TY  L+
Sbjct: 660 EAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLM 719

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
           Y   K G   +A   F EM+   VIPD I+Y TL+       ++ +      EL S  L 
Sbjct: 720 YAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEVNSLDKDIGHTAELSSGALT 779

Query: 416 PTVVTYNTLIDGL 428
                YN L +G+
Sbjct: 780 KDDRMYNILSNGI 792



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 37/221 (16%)

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR-KGLSPTLVT 595
           GSL  A +  R +   G  P   T  + + A +  G L   R++F+ M   + ++    +
Sbjct: 164 GSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYS 223

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA-------- 647
           YT +I A    G+++  F   +E+   G++P V+TYN L++ LC+  R+++A        
Sbjct: 224 YTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRME 283

Query: 648 ----------YGLFI-----------------DMEEEGILPNKYTYTILINENCNAGNWQ 680
                     +G+ I                 +ME+ G+ PN+  Y  LI  +C  G+  
Sbjct: 284 QGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCS 343

Query: 681 EALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYL 721
           +ALRL+ EM+ ++++P   T++ L+ K L K+ ++   E +
Sbjct: 344 QALRLFDEMVLKKMKPTAVTYN-LIAKALCKEGEMERAERI 383



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 4/111 (3%)

Query: 599 LIHA---HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM- 654
           LIH      A+G L  A   F  +  +G  P++ T NA +  L R  ++D A  +F +M 
Sbjct: 153 LIHTFITSPAQGSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMR 212

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           E   +  N+Y+YT +I   C AG       +  E+    ++P   T++ L+
Sbjct: 213 ESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLM 263


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 146/459 (31%), Positives = 238/459 (51%), Gaps = 3/459 (0%)

Query: 247 NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
           N  L    + GE++E L+ L  M  +G  P+ +    LI GF R+G+ ++A  ++  +  
Sbjct: 110 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILEN 169

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
            G      +YN +I GY + G + +AL + E M    VAP + TYN ++  LC  G++ +
Sbjct: 170 SGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKE 226

Query: 367 ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
           A       L++   PD+I+Y  L+   C    +G+A  L DE+R +   P VVTYN LI+
Sbjct: 227 AMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 286

Query: 427 GLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
           G+C+ G L+ A +   NM + G  P+VIT+ I++   C  G    A    ++MLRKG  P
Sbjct: 287 GICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSP 346

Query: 487 DRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
               +   I    +      A  + E+M   G  P+ ++YN L+HG C+   ++ A E L
Sbjct: 347 SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYL 406

Query: 547 RKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAAR 606
             MV  G  PD +TY +++ A  + G +    ++ N +  KG SP L+TY  +I      
Sbjct: 407 EIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKV 466

Query: 607 GRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
           G+ E A     EM+ KG++P++ITY+ L+ GL R  ++D+A  +F DME   I P+  TY
Sbjct: 467 GKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTY 526

Query: 667 TILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             ++   C A     A+     M+++  +P   T++ L+
Sbjct: 527 NAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILI 565



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 138/475 (29%), Positives = 244/475 (51%), Gaps = 22/475 (4%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
             K++RNG L              + G     R +Y+     G  P ++   +++  FC+
Sbjct: 113 LRKLVRNGEL--------------EEGLKFLERMIYQ-----GDIPDVIACTSLIRGFCR 153

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
            G+ ++A  ++  ++  G  P+ +TYNVLI G+ ++GE+++A  ++    ++ +     +
Sbjct: 154 SGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLE---RMSVAPDVVT 210

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           YN I+    + G L EA+ + +  + R   P + TY ILI   C    V  A     EM 
Sbjct: 211 YNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMR 270

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
           +K   PD+++YN L+ G C+ G + EA    + + S    P V+T+N ++  +C  G   
Sbjct: 271 KKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWM 330

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            A++L  +M+ +G  P V+T+ I++N  C+   L  A +   +M + G  P+  +Y   +
Sbjct: 331 DAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLL 390

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
            G  +      A    E M+++G  PD++TYN L+  LCK G ++ A E+L ++   G  
Sbjct: 391 HGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCS 450

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           P  ITY ++I    ++G      +L   M RKGL P ++TY+ L+      G+++ A   
Sbjct: 451 PVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKI 510

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
           F +M+   I+P+ +TYNA++ GLC+ ++  +A      M E+G  P + TYTILI
Sbjct: 511 FHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILI 565



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 176/595 (29%), Positives = 278/595 (46%), Gaps = 42/595 (7%)

Query: 15  SYHYFYLKKVR-----FFFPFCFSVHTYPSISESNNKDSVLNPESESYYKELIISTVEEK 69
           S+H+F++ + R        PF      YP  S S++   +    S     E  +S V + 
Sbjct: 12  SFHHFHITRARVSDNSISRPFVL----YPDSSVSHHFSKLKATRSRKRL-ENRVSAVSKS 66

Query: 70  PWAFCNNRWVSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCT 129
             +  N R      Q +VS P   + V+    E   I +   R  E        EF    
Sbjct: 67  EASGLNGR-----LQQIVSTPNGDLNVIGM--ESSPIGVNGSRSFE--------EFASNI 111

Query: 130 ILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMV 189
            L  L+ +G L      +E ++      I DV+      +C S      L+  + +    
Sbjct: 112 HLRKLVRNGELEEGLKFLERMI--YQGDIPDVI------ACTS------LIRGFCRSGKT 157

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           ++   +   +  +G +PDV   N +I     +G   KA EV   M    + P +VTYNT+
Sbjct: 158 KKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMS---VAPDVVTYNTI 214

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           L S C  G+++EA+E+L     R C P+ +TY +LI     +  + QA  L+ +M K G 
Sbjct: 215 LRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGC 274

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
           K    +YN +I G  ++G L EA+     M + G  P + T+NI++  +C  GR  DA  
Sbjct: 275 KPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAER 334

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
              +MLRK   P ++++N L+   CR   +G A  + +++     VP  ++YN L+ G C
Sbjct: 335 LLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFC 394

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
           +   ++ A +  E M+++G  PD++TY  ++   CK G +  A E  N++  KG  P   
Sbjct: 395 QEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLI 454

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
            Y T I G  K+G T  A  L EEM  KG  PD+ITY+ L+ GL + G ++EA ++   M
Sbjct: 455 TYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDM 514

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
            G    P  +TY +I+    +     R  D    M+ KG  PT  TYT+LI   A
Sbjct: 515 EGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGIA 569



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 134/441 (30%), Positives = 227/441 (51%), Gaps = 5/441 (1%)

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
           N+ +    RNGELE+    +  M+  G      +   +I G+   G   +A  + E +  
Sbjct: 110 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILEN 169

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEML-RKNVIPDIISYNTLLYGYCRSGNIG 400
            G  P + TYN+LI G CK G +  A     E+L R +V PD+++YNT+L   C SG + 
Sbjct: 170 SGAVPDVITYNVLIGGYCKSGEIDKA----LEVLERMSVAPDVVTYNTILRSLCDSGKLK 225

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           EA  + D    R   P V+TY  LI+  C    +  A +L + M  +G  PDV+TY +++
Sbjct: 226 EAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLI 285

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
           NG CK G L  A +F N M   G +P+   +   +      G   +A RL  +ML KG  
Sbjct: 286 NGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCS 345

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           P ++T+N+L++ LC+   L  A ++L KM   G +P+ ++Y  ++H   +   + R  + 
Sbjct: 346 PSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEY 405

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
              M+ +G  P +VTY  L+ A    G+++ A    +++  KG  P +ITYN +I+GL +
Sbjct: 406 LEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTK 465

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
           + + + A  L  +M  +G+ P+  TY+ L+      G   EA++++ +M    I+P   T
Sbjct: 466 VGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVT 525

Query: 701 HSALLLKQLDKDYKVHAVEYL 721
           ++A++L          A+++L
Sbjct: 526 YNAIMLGLCKAQQTSRAIDFL 546



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 134/450 (29%), Positives = 229/450 (50%), Gaps = 3/450 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +E+ L    +M+  G +PDV  C  +I+    +G + KA  +  ++   G  P ++TYN 
Sbjct: 122 LEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNV 181

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++  +CK GE+ +ALE+L  M     +P+ VTYN ++     +G+L++A  ++   L+  
Sbjct: 182 LIGGYCKSGEIDKALEVLERMS---VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRE 238

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
                 +Y  +I        + +A+ L +EM  +G  P + TYN+LI G+CK GR+ +A 
Sbjct: 239 CYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAI 298

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
                M      P++I++N +L   C +G   +A  L  ++  +   P+VVT+N LI+ L
Sbjct: 299 KFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFL 358

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           CR   L  A  + E M   G +P+ ++Y  +++G C+   +  A E+   M+ +G  PD 
Sbjct: 359 CRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDI 418

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             Y T +    K G    A  +  ++ +KG  P LITYN ++ GL K+G  E A ELL +
Sbjct: 419 VTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEE 478

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M   G  PD ITY++++      G +     +F++M    + P+ VTY  ++       +
Sbjct: 479 MRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQ 538

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGL 638
              A  + + M  KG +P   TY  LI G+
Sbjct: 539 TSRAIDFLAYMVEKGCKPTEATYTILIEGI 568



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 77/149 (51%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           + LL    K   V+  + + N++   G  P +   N +I  L   G +  A E+   M  
Sbjct: 422 NTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRR 481

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G+KP I+TY+T+L    +EG++ EA+++  +M+G    P+ VTYN ++ G  +  +  +
Sbjct: 482 KGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSR 541

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           A   +  M++ G K +  +Y  +I G ++
Sbjct: 542 AIDFLAYMVEKGCKPTEATYTILIEGIAD 570


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 165/582 (28%), Positives = 280/582 (48%), Gaps = 69/582 (11%)

Query: 193 LLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDS 252
           L V  K+L+ G  PD    N +IK L   G   +A   +  +   G + + V+Y T+++ 
Sbjct: 48  LSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLING 107

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
            C+ G+ + A++ L ++ GR   PN   YN +I    +   + +A GL  +M   G+  +
Sbjct: 108 VCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISAN 167

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
             +Y+ +I G+   G L EAL L   MV + + P + TYNIL+  LCK G+V +A+    
Sbjct: 168 VVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLA 227

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
            ML+  V  ++I+Y+TL+ GY     + +A  +F+ +    + P V +YN +I+G C+  
Sbjct: 228 VMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIK 287

Query: 433 DLEVAQQLKENMI----------------------------------NQGILPDVITYTI 458
            ++ A  L + MI                                   +GI PD+ T  I
Sbjct: 288 RVDKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNI 347

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           ++N  C MG ++       ++L++G  P      T I G    G   +A    +++LA+G
Sbjct: 348 LINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 407

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVG--------------------------- 551
           F  + ++Y  L++G+CK+G    A +LLRK+ G                           
Sbjct: 408 FQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAY 467

Query: 552 --------DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
                    G   D +TY+++I+    +G L+    L N M+ K ++P + TYT+L+ A 
Sbjct: 468 GLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDAL 527

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
              G+++ A    + M    ++P+V TYN L+NG   +  + +A  +F  M   G+ P+ 
Sbjct: 528 GKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDV 587

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +TYTILIN  C +    EAL L+KEM  + + PD  T+S+L+
Sbjct: 588 HTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLV 629



 Score =  254 bits (650), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 158/510 (30%), Positives = 258/510 (50%), Gaps = 1/510 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K   V++ L +F +M+ +   P +   N+I+           A  +   +   GI+P 
Sbjct: 283 FCKIKRVDKALNLFKEMILSRF-PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPD 341

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           + T N +++ FC  G++     +L ++  RG  P+ VT N LI G    G++++A     
Sbjct: 342 LFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHD 401

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            +L  G +++  SY  +I G  + G    A+ L  ++  R   P +  Y+ +I  LCK+ 
Sbjct: 402 KLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQ 461

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            VS+A   F EM  K +  D+++Y+TL+YG+C  G + EA  L +E+  + + P V TY 
Sbjct: 462 LVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYT 521

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            L+D L + G ++ A+ +   M+   + PDV TY  ++NG   +  +  A+  FN M   
Sbjct: 522 ILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLM 581

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G+ PD   YT  I G  K     EA  L +EM  K   PD +TY+ LV GLCK G +   
Sbjct: 582 GVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYV 641

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            +L+ +M   G   D ITY S+I    + G L +   LFN M  +G+ P   T+T+L+  
Sbjct: 642 WDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDG 701

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
               GRL+ A   F ++  KG   +V  YN +I G C+   +++A  +   MEE G +PN
Sbjct: 702 LCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPN 761

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDR 692
             T+ I+IN         +A +L ++M+ R
Sbjct: 762 AVTFDIIINALFKKDENDKAEKLLRQMIAR 791



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 164/543 (30%), Positives = 274/543 (50%), Gaps = 15/543 (2%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           ++D   L+Y     V++   VFN M   G+ PDV + N +I     NGF  K + V + +
Sbjct: 244 LMDGYFLVYE----VKKAQHVFNAMSLMGVTPDVHSYNIMI-----NGFC-KIKRVDKAL 293

Query: 235 GEFGIK-----PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
             F        P I+ +N +LDSF K      A+ L   ++ +G  P+  T N+LI  F 
Sbjct: 294 NLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFC 353

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
             G++     ++  +LK G   S  + N +I G   KG + +AL+  ++++ +G      
Sbjct: 354 HMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQV 413

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           +Y  LI G+CK G    A     ++  +   P++  Y+T++   C+   + EA+ LF E+
Sbjct: 414 SYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEM 473

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
             + +   VVTY+TLI G C  G L+ A  L   M+ + I PDV TYTI+V+   K G +
Sbjct: 474 TVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKV 533

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A+     ML+  ++PD F Y T + G L + +  +A  +   M   G  PD+ TY +L
Sbjct: 534 KEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTIL 593

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           ++G CK   ++EA  L ++M     +PD +TY+S++    + G +    DL + M  +G 
Sbjct: 594 INGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQ 653

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
              ++TY  LI      G L+ A   F++M+ +GIRPN  T+  L++GLC+  R+  A  
Sbjct: 654 PADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQE 713

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQL 709
           +F D+  +G   + Y Y ++I  +C  G  +EAL +  +M +    P+  T   ++    
Sbjct: 714 VFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALF 773

Query: 710 DKD 712
            KD
Sbjct: 774 KKD 776



 Score =  251 bits (642), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 166/591 (28%), Positives = 279/591 (47%), Gaps = 104/591 (17%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P+V+  N II  L       +A  ++  M   GI  ++VTY+T++  FC  G+++EAL L
Sbjct: 131 PNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGL 190

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           L  M  +  +PN  TYN+L+    + G++++A+ ++  MLK  +K +  +Y+ ++ GY  
Sbjct: 191 LNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFL 250

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR--------- 376
              + +A ++   M   GV P + +YNI+I G CK  RV  A + F EM+          
Sbjct: 251 VYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQF 310

Query: 377 -------------------------KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
                                    K + PD+ + N L+  +C  G I   F +  ++  
Sbjct: 311 NKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILK 370

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN--- 468
           R   P+ VT NTLI GLC  G ++ A    + ++ QG   + ++Y  ++NG CK+G+   
Sbjct: 371 RGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRG 430

Query: 469 --------------------------------LSMAREFFNEMLRKGLQPDRFAYTTQIA 496
                                           +S A   F+EM  KG+  D   Y+T I 
Sbjct: 431 AIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIY 490

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
           G   +G   EA  L  EM+ K   PD+ TY +LV  L K G ++EA  +L  M+     P
Sbjct: 491 GFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKP 550

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
           D  TY ++++  L + ++++ + +FN M   G++P + TYT+LI+       ++ A   F
Sbjct: 551 DVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLF 610

Query: 617 SEMQVKGIRPN-----------------------------------VITYNALINGLCRL 641
            EM  K + P+                                   VITYN+LI+GLC+ 
Sbjct: 611 KEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKN 670

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
             +D+A  LF  M+++GI PN +T+TIL++  C  G  ++A  +++++L +
Sbjct: 671 GHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTK 721



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 147/439 (33%), Positives = 232/439 (52%), Gaps = 5/439 (1%)

Query: 222 GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY 281
           GFSV A+ + R     G  PS VT NT++   C +G++++AL    ++  +G   N V+Y
Sbjct: 361 GFSVLAKILKR-----GYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSY 415

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
             LI G  + G+   A  L+R +     K +   Y+ II    +  L+ EA  L  EM  
Sbjct: 416 ATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTV 475

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
           +G++  + TY+ LIYG C  G++ +A     EM+ K + PD+ +Y  L+    + G + E
Sbjct: 476 KGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKE 535

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           A  +   +    + P V TYNTL++G     +++ AQ +   M   G+ PDV TYTI++N
Sbjct: 536 AKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILIN 595

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
           G CK   +  A   F EM +K + PD   Y++ + G  K G  S  + L +EM  +G P 
Sbjct: 596 GFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPA 655

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           D+ITYN L+ GLCK G L++A  L  KM   G  P+  T+T ++    + G L+  +++F
Sbjct: 656 DVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVF 715

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
            ++L KG    +  Y V+I+ H  +G LE A    S+M+  G  PN +T++ +IN L + 
Sbjct: 716 QDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKK 775

Query: 642 RRIDQAYGLFIDMEEEGIL 660
              D+A  L   M   G+L
Sbjct: 776 DENDKAEKLLRQMIARGLL 794



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 165/344 (47%), Gaps = 36/344 (10%)

Query: 398 NIGEAFLL--FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
           N+ +A  L    ++  R   P  VT NTLI GLC  G ++ A    + ++ QG   + ++
Sbjct: 41  NVDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVS 100

Query: 456 YTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML 515
           Y  ++NG C++G+   A +F  ++  +  +P+   Y T I    K    SEAY L  EM 
Sbjct: 101 YATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMT 160

Query: 516 AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLR 575
            KG   +++TY+ L++G C +G L+EA  LL  MV     P+  TY  ++ A  + G ++
Sbjct: 161 VKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVK 220

Query: 576 RGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALI 635
             + +   ML+  +   ++TY+ L+  +     ++ A   F+ M + G+ P+V +YN +I
Sbjct: 221 EAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMI 280

Query: 636 NGLCRLRRIDQAYGLFIDM----------------------------------EEEGILP 661
           NG C+++R+D+A  LF +M                                  E +GI P
Sbjct: 281 NGFCKIKRVDKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQP 340

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           + +T  ILIN  C+ G       +  ++L R   P   T + L+
Sbjct: 341 DLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLI 384


>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
          Length = 871

 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 154/510 (30%), Positives = 265/510 (51%), Gaps = 3/510 (0%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           M+R+G+ P V     I+  L   G  V+AR+++  + + GI P+   YNT++D + K  E
Sbjct: 308 MVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKARE 367

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           + +A  L  EM+  G SP+ VT+N+L+ G  + G +E +  L++D++  GL + +  Y+ 
Sbjct: 368 VAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDV 427

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           ++      G L EA+ L +E++ +G+  ++  +N LI    + G    A   +  M+R  
Sbjct: 428 MVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCG 487

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
             P   + N+LL G CR G + EA +L   +  +      V Y  L+DG  +  +LE AQ
Sbjct: 488 FTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQ 547

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
            L + M  +GI PD + +T +++G  K GN+  A E F EM   G  P+ FAY + I G 
Sbjct: 548 FLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGL 607

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
              G  +EA +L++EM  KG   D  T+N+++ G C+ G ++ A E    M   G +PD 
Sbjct: 608 CDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDI 667

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
            T+  +I    +  D+    ++ N M   GL P + TY   +H +    ++  A +   +
Sbjct: 668 FTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQ 727

Query: 619 MQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGN 678
           +   GI P+ +TYN +++G+C    +D+A  L   + + G +PN  T  +L++  C  G 
Sbjct: 728 LISAGIVPDTVTYNTMLSGICS-DILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGM 786

Query: 679 WQEALRLYKEMLDREIEPDYCTHSALLLKQ 708
            ++AL   +++  REI   +   S  +L Q
Sbjct: 787 PEKALIWGQKL--REISFGFDEISYRILDQ 814



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 149/500 (29%), Positives = 264/500 (52%), Gaps = 1/500 (0%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           PDV   N +I      G +  A +   +M   G++PS+ T+ T+L + C+EG + EA +L
Sbjct: 280 PDVVTFNILINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKL 339

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
              +Q  G +PN   YN L+ G+ +  E+ QA  L  +M   G+     ++N ++ G+ +
Sbjct: 340 FDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYK 399

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
            G + ++  L ++++  G+    + Y++++  LC  GR+ +A     E+L K +   +++
Sbjct: 400 YGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVA 459

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           +N+L+  Y R+G   +AF  +  +      P+  T N+L+ GLCR G L+ A+ L   M+
Sbjct: 460 FNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRML 519

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
            +G   + + YT++++G  KM NL  A+  + EM  +G+ PD  A+T  I G  K G+  
Sbjct: 520 EKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVE 579

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           EAY +  EM A GF P+   YN L+ GLC  G + EA +L ++M   G + D  T+  II
Sbjct: 580 EAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIII 639

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
                 G ++   + F +M R GL P + T+ +LI  +     +  A    ++M   G+ 
Sbjct: 640 DGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLD 699

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           P++ TYN  ++G CR+R+++QA  +   +   GI+P+  TY  +++  C +     A+ L
Sbjct: 700 PDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSGIC-SDILDRAMIL 758

Query: 686 YKEMLDREIEPDYCTHSALL 705
             ++L     P+  T + LL
Sbjct: 759 TAKLLKMGFIPNVITTNMLL 778



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 152/513 (29%), Positives = 260/513 (50%), Gaps = 2/513 (0%)

Query: 195 VFNKMLRNGLL--PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDS 252
           + + M RN  +   D    N +++   + G   +A EV RMM   G++P + +   +L  
Sbjct: 162 IVDFMWRNHAMYESDFSVLNTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRL 221

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
             + G+     +L  +M  +G  P+ +T+N +I GF R   +     L+  M K      
Sbjct: 222 LLRIGDYGSVWKLFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPD 281

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
             ++N +I      G    A++    MV  GV P++AT+  +++ LC+ G V +AR  F 
Sbjct: 282 VVTFNILINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFD 341

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
            +    + P+   YNTL+ GY ++  + +A LL++E+R+  + P  VT+N L+ G  +YG
Sbjct: 342 GIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYG 401

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
            +E + +L +++I  G+  D   Y +MV+  C  G L  A +   E+L KGL     A+ 
Sbjct: 402 RIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFN 461

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
           + I    + G   +A+     M+  GF P   T N L+ GLC+ G L+EA  LL +M+  
Sbjct: 462 SLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEK 521

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
           GF  + + YT ++    +M +L   + L+  M  +G+ P  V +T LI   +  G +E A
Sbjct: 522 GFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEA 581

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
           +  F EM   G  PN   YN+LI GLC   R+ +A  L  +M ++G+L + +T+ I+I+ 
Sbjct: 582 YEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDG 641

Query: 673 NCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            C  G  + A+  + +M    + PD  T + L+
Sbjct: 642 FCRRGQMKFAIETFLDMQRIGLLPDIFTFNILI 674



 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 145/511 (28%), Positives = 248/511 (48%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F  M+  G  P     N +I         V    +  +M +F   P +VT+N ++++ C
Sbjct: 234 LFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACC 293

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
             G    A++ L  M   G  P+  T+  ++    R G + +AR L   +  +G+  +A 
Sbjct: 294 IGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAA 353

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
            YN ++ GY +   + +A  L EEM T GV+P   T+NIL++G  K+GR+ D+     ++
Sbjct: 354 IYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDL 413

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           +   +  D   Y+ ++   C +G + EA  L  EL  + L  +VV +N+LI    R G  
Sbjct: 414 IVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLE 473

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A +    M+  G  P   T   ++ G C+ G L  AR     ML KG   ++ AYT  
Sbjct: 474 DKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVL 533

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           + G  K+ +   A  L +EM  +G  PD + +  L+ GL K G++EEA E+  +M   GF
Sbjct: 534 LDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGF 593

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
           +P++  Y S+I    + G +     L   M +KGL     T+ ++I     RG+++ A  
Sbjct: 594 VPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIE 653

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F +MQ  G+ P++ T+N LI G C+   +  A  +   M   G+ P+  TY   ++  C
Sbjct: 654 TFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYC 713

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
                 +A+ +  +++   I PD  T++ +L
Sbjct: 714 RMRKMNQAVIILDQLISAGIVPDTVTYNTML 744



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 122/385 (31%), Positives = 200/385 (51%), Gaps = 1/385 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +++ + +  ++L  GL   V   N +I      G   KA E YR+M   G  PS  T N+
Sbjct: 438 LDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNS 497

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +L   C++G +QEA  LL+ M  +G   N V Y VL+ G+ +   LE A+ L ++M + G
Sbjct: 498 LLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERG 557

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           +   A ++  +I G S+ G + EA  +  EM   G  P    YN LI GLC  GRV++A 
Sbjct: 558 IYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEAL 617

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               EM +K ++ D  ++N ++ G+CR G +  A   F +++   L+P + T+N LI G 
Sbjct: 618 KLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGY 677

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+  D+  A ++   M + G+ PD+ TY   ++G C+M  ++ A    ++++  G+ PD 
Sbjct: 678 CKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDT 737

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             Y T ++G +       A  L  ++L  GF P++IT N+L+   CK G  E+A    +K
Sbjct: 738 VTYNTMLSG-ICSDILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKALIWGQK 796

Query: 549 MVGDGFIPDHITYTSIIHASLEMGD 573
           +    F  D I+Y  +  A   M D
Sbjct: 797 LREISFGFDEISYRILDQAYCLMQD 821



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/391 (30%), Positives = 205/391 (52%), Gaps = 4/391 (1%)

Query: 170 CVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE 229
           CV+  IL   +  + K   +E    +   ++ +GL  D    + ++  L   G   +A +
Sbjct: 387 CVTFNIL---VWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMK 443

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           + + + E G+  S+V +N+++ ++ + G   +A E    M   G +P+  T N L+ G  
Sbjct: 444 LLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLC 503

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           R G L++AR L+  ML+ G  ++  +Y  ++ GY +   L  A  L +EM  RG+ P   
Sbjct: 504 RKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAV 563

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
            +  LI GL K G V +A   F EM     +P+  +YN+L+ G C  G + EA  L  E+
Sbjct: 564 AFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEM 623

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
           R + L+    T+N +IDG CR G ++ A +   +M   G+LPD+ T+ I++ G CK  ++
Sbjct: 624 RQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDM 683

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A E  N+M   GL PD   Y T + G  ++   ++A  + +++++ G  PD +TYN +
Sbjct: 684 VGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTM 743

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
           + G+C    L+ A  L  K++  GFIP+ IT
Sbjct: 744 LSGICS-DILDRAMILTAKLLKMGFIPNVIT 773



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 84/359 (23%), Positives = 156/359 (43%), Gaps = 35/359 (9%)

Query: 348 LATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFD 407
            +  N L+ G    G   +A      M    V P + S   LL    R G+ G  + LF 
Sbjct: 177 FSVLNTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLFK 236

Query: 408 ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG 467
           ++  +   P+ +T+N +I G CR   + V + L   M      PDV+T+ I++N  C  G
Sbjct: 237 DMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGG 296

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
              +A ++ + M+R G++P                                    + T+ 
Sbjct: 297 RTWVAIDWLHLMVRSGVEPS-----------------------------------VATFT 321

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
            ++H LC+ G++ EA +L   +   G  P+   Y +++    +  ++ +   L+  M   
Sbjct: 322 TILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTT 381

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
           G+SP  VT+ +L+  H   GR+E +     ++ V G+  +   Y+ +++ LC   R+D+A
Sbjct: 382 GVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEA 441

Query: 648 YGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
             L  ++ E+G+  +   +  LI     AG   +A   Y+ M+     P   T ++LL+
Sbjct: 442 MKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLM 500


>gi|255569835|ref|XP_002525881.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534795|gb|EEF36485.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 913

 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 202/750 (26%), Positives = 319/750 (42%), Gaps = 134/750 (17%)

Query: 89  DPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGL---LRSAYW 145
           D   +V +L  ++ +P  AL FF  ++   G K D   +  I+ IL   GL   LRS + 
Sbjct: 65  DSFKVVDILYNLKNQPISALSFFNQLK-DSGFKHDISTYAAIIRILCYWGLHKQLRSIFL 123

Query: 146 VVETVVCVN------MHGILDVLIGGGLS------SCVSIKILDLLLLIYTKKSMVEQCL 193
            +  V C +      +   LD L  G +       S    K+ D L+  Y    M +  +
Sbjct: 124 DIIYVSCNDNDTPFEISHFLDTLSDGFVDVDSKKQSLFMSKVYDALVKAYVSVGMFDDAI 183

Query: 194 LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
            V  +M R   +P +  CN ++  L  N     A  VY+ +   G+ P+  TY  ++ + 
Sbjct: 184 DVLFQMGRRRFVPHIFICNFLMNSLIKNSKLDMALAVYKQLKRLGLSPNDYTYAIVIKAL 243

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYN------------------------------- 282
           C  G ++EA+ ++ EM+  G +P G  Y                                
Sbjct: 244 CINGSLEEAMYVIKEMEESGITPTGFAYTAYIEGLCVNEMSDLGYQVLQAWKGANIPLDM 303

Query: 283 ----VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
               V + GF    + ++A  ++RDM K G+    H Y  +IC + + G L++A     E
Sbjct: 304 YAYTVAVRGFCNELKFDKAESVLRDMEKEGMVPDMHCYTALICRFCKAGNLLKAYAFLNE 363

Query: 339 MVTRGVAPTLA-----------------------------------TYNILIYGLCKWGR 363
           M+++GV                                        +YN ++  LCK G+
Sbjct: 364 MMSKGVKVNCVIVGSILHCLCELGMHSEVVDQFNQFKSLGLFLDGVSYNNVVDALCKLGK 423

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           + +A     EM  K +  D++ Y TL+ GYC  GN+ +AF +F+E+R   +   VVTY+ 
Sbjct: 424 LEEAITLLDEMKMKQINMDVMHYTTLINGYCCQGNVVDAFKVFEEMRENGIEIDVVTYDV 483

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           L+ G CR G    A  L + M  Q + P+ ITY ++V   C  G +  A   FN +  K 
Sbjct: 484 LVSGFCRNGLATEALNLLDYMQTQKLKPNSITYNVVVESLCMGGKVKEAEAVFNSIEDKS 543

Query: 484 LQP-----DRFAYTTQIAGELKL-------------------------GDTSEAYRLQEE 513
           L       + +      AG  KL                         GD      L E 
Sbjct: 544 LDNYFAMINGYCKANHTAGAAKLFFRLSVKGHVKRSCCYNLLKNLCEEGDNDGILMLLET 603

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGS---LEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
           ML     P    Y  L   LC+ G    + +A  +   ++  G+ PD I YT +I +   
Sbjct: 604 MLNLNVEPSKFIYGKLFTSLCRAGGAAGMRKAQSVFDMLLKRGWTPDLIAYTIMITSYCR 663

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH-------------AARGRLEL--AFMY 615
           M  L+   DLF++M ++G+ P LVT+TVL+  H             A  G  ++  A   
Sbjct: 664 MNCLKEAVDLFHDMKQRGIKPDLVTFTVLLDGHHKAHIKKVYSAANAKGGNEDIFDALAI 723

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
           ++EM+   I+P+VI Y  LI+G C++  +  A G+F +M E G+ P+  TYT L++  C 
Sbjct: 724 WTEMKDTEIKPDVIFYTVLIDGYCKVDSLHDAIGVFDEMIERGLEPDIITYTALLSGCCQ 783

Query: 676 AGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            G+   A+ L  +M  + I PD  T SALL
Sbjct: 784 RGDVDRAVNLLDQMSLKGISPDTRTMSALL 813



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 129/466 (27%), Positives = 227/466 (48%), Gaps = 23/466 (4%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
            N+M+  G+  +      I+  L + G   +  + +      G+    V+YN ++D+ CK
Sbjct: 361 LNEMMSKGVKVNCVIVGSILHCLCELGMHSEVVDQFNQFKSLGLFLDGVSYNNVVDALCK 420

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
            G+++EA+ LL EM+ +  + + + Y  LI G+   G +  A  +  +M + G+++   +
Sbjct: 421 LGKLEEAITLLDEMKMKQINMDVMHYTTLINGYCCQGNVVDAFKVFEEMRENGIEIDVVT 480

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           Y+ ++ G+   GL  EALNL + M T+ + P   TYN+++  LC  G+V +A   F  + 
Sbjct: 481 YDVLVSGFCRNGLATEALNLLDYMQTQKLKPNSITYNVVVESLCMGGKVKEAEAVFNSIE 540

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
            K+    + +Y  ++ GYC++ +   A  LF  L  +  V     YN L+  LC  GD +
Sbjct: 541 DKS----LDNYFAMINGYCKANHTAGAAKLFFRLSVKGHVKRSCCYN-LLKNLCEEGDND 595

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGN---LSMAREFFNEMLRKGLQPDRFAYT 492
               L E M+N  + P    Y  +    C+ G    +  A+  F+ +L++G  PD  AYT
Sbjct: 596 GILMLLETMLNLNVEPSKFIYGKLFTSLCRAGGAAGMRKAQSVFDMLLKRGWTPDLIAYT 655

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL--------GSLEEANE 544
             I    ++    EA  L  +M  +G  PDL+T+ VL+ G  K          + +  NE
Sbjct: 656 IMITSYCRMNCLKEAVDLFHDMKQRGIKPDLVTFTVLLDGHHKAHIKKVYSAANAKGGNE 715

Query: 545 -------LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
                  +  +M      PD I YT +I    ++  L     +F+ M+ +GL P ++TYT
Sbjct: 716 DIFDALAIWTEMKDTEIKPDVIFYTVLIDGYCKVDSLHDAIGVFDEMIERGLEPDIITYT 775

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
            L+     RG ++ A     +M +KGI P+  T +AL++G+ + R+
Sbjct: 776 ALLSGCCQRGDVDRAVNLLDQMSLKGISPDTRTMSALLHGILKTRQ 821



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 188/404 (46%), Gaps = 23/404 (5%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   +E+ + + ++M    +  DV +   +I      G  V A +V+  M E GI+  +V
Sbjct: 420 KLGKLEEAITLLDEMKMKQINMDVMHYTTLINGYCCQGNVVDAFKVFEEMRENGIEIDVV 479

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY+ ++  FC+ G   EAL LL  MQ +   PN +TYNV++      G++++A  +   +
Sbjct: 480 TYDVLVSGFCRNGLATEALNLLDYMQTQKLKPNSITYNVVVESLCMGGKVKEAEAVFNSI 539

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
               L     +Y  +I GY +      A  L   +  +G       YN+L   LC+ G  
Sbjct: 540 EDKSLD----NYFAMINGYCKANHTAGAAKLFFRLSVKGHVKRSCCYNLL-KNLCEEGDN 594

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG---EAFLLFDELRSRNLVPTVVTY 421
                    ML  NV P    Y  L    CR+G      +A  +FD L  R   P ++ Y
Sbjct: 595 DGILMLLETMLNLNVEPSKFIYGKLFTSLCRAGGAAGMRKAQSVFDMLLKRGWTPDLIAY 654

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG-------------SCKMGN 468
             +I   CR   L+ A  L  +M  +GI PD++T+T++++G             + K GN
Sbjct: 655 TIMITSYCRMNCLKEAVDLFHDMKQRGIKPDLVTFTVLLDGHHKAHIKKVYSAANAKGGN 714

Query: 469 LSM--AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
             +  A   + EM    ++PD   YT  I G  K+    +A  + +EM+ +G  PD+ITY
Sbjct: 715 EDIFDALAIWTEMKDTEIKPDVIFYTVLIDGYCKVDSLHDAIGVFDEMIERGLEPDIITY 774

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
             L+ G C+ G ++ A  LL +M   G  PD  T ++++H  L+
Sbjct: 775 TALLSGCCQRGDVDRAVNLLDQMSLKGISPDTRTMSALLHGILK 818



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 20/216 (9%)

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           KA+ V+ M+ + G  P ++ Y  M+ S+C+   ++EA++L  +M+ RG  P+ VT+ VL+
Sbjct: 634 KAQSVFDMLLKRGWTPDLIAYTIMITSYCRMNCLKEAVDLFHDMKQRGIKPDLVTFTVLL 693

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            G  +             + K+    +A   N  I          +AL +  EM    + 
Sbjct: 694 DGHHK-----------AHIKKVYSAANAKGGNEDI---------FDALAIWTEMKDTEIK 733

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P +  Y +LI G CK   + DA   F EM+ + + PDII+Y  LL G C+ G++  A  L
Sbjct: 734 PDVIFYTVLIDGYCKVDSLHDAIGVFDEMIERGLEPDIITYTALLSGCCQRGDVDRAVNL 793

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
            D++  + + P   T + L+ G+ +       Q LK
Sbjct: 794 LDQMSLKGISPDTRTMSALLHGILKTRQCSAPQCLK 829


>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
          Length = 987

 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 162/501 (32%), Positives = 262/501 (52%), Gaps = 6/501 (1%)

Query: 229 EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
           ++Y  + + G+ P  VTYNTM+ ++CK+G +  A      ++  G   +  T N L+ G+
Sbjct: 165 KLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGY 224

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
            R  +L +A  L+  M  +G + + +SY  +I G  E   + EAL L   MV  G +  L
Sbjct: 225 CRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNL 284

Query: 349 ATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDE 408
            TY +LI GLCK GR+ DAR    EM  + V+P + +YN ++ GYC+SG + +A  +   
Sbjct: 285 HTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKAL 344

Query: 409 LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
           +      P   TYN+LI GLC  G L+ A++L    I +G  P VIT+T ++NG CK   
Sbjct: 345 MEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAER 403

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
           +  A    + M+    + D  AY   I   +K     EA     EM A G  P+++TY  
Sbjct: 404 IDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTS 463

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           ++ G CK+G +  A E+ + M  +G  P+  TY S+I+  ++   L +   L   M   G
Sbjct: 464 IIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDG 523

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
           ++P ++TYT LI     +   + AF  F  M+  G+ P+   YN L + LC+  R ++AY
Sbjct: 524 ITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAY 583

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQ 708
              +    +G++  K TYT L++    AGN   A  L ++M++   + D  T+S +LL+ 
Sbjct: 584 SFLV---RKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYS-VLLQA 639

Query: 709 LDKDYKVH-AVEYLESLTLGA 728
           L K  K++ A+  L+ +T+  
Sbjct: 640 LCKQKKLNEALSILDQMTVSG 660



 Score =  258 bits (660), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 168/565 (29%), Positives = 265/565 (46%), Gaps = 49/565 (8%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V + L++   M+ +G   ++     +IK L   G    AR +   M   G+ PS+ TYN 
Sbjct: 265 VREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNA 324

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           M+D +CK G M++AL +   M+  GC+P+  TYN LI G    G+L++A  L+   +  G
Sbjct: 325 MIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARG 383

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
              +  ++  +I GY +   + +AL ++  M++      L  Y +LI  L K  R+ +A+
Sbjct: 384 FTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAK 443

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               EM    + P++++Y +++ GYC+ G +G A  +F  +      P   TY +LI GL
Sbjct: 444 ETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGL 503

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD- 487
            +   L  A  L   M   GI P VITYT ++ G CK      A   F  M + GL PD 
Sbjct: 504 IQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDE 563

Query: 488 -------------------------------RFAYTTQIAGELKLGDTSEAYRLQEEMLA 516
                                          +  YT+ + G  K G+T  A  L E+M+ 
Sbjct: 564 QAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVN 623

Query: 517 KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
           +G   DL TY+VL+  LCK   L EA  +L +M   G   + + YT II   ++ G    
Sbjct: 624 EGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDH 683

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
            + LFN M+  G  P+  TYTV I ++   GR+E A     EM+  G+ P+V+TYN  IN
Sbjct: 684 AKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFIN 743

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN-------------ENCNAGNWQE-- 681
           G   +  ID+A+     M +    PN +TY +L+              +     NW E  
Sbjct: 744 GCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELN 803

Query: 682 -ALRLYKEMLDREIEPDYCTHSALL 705
              +L + M+   + P   T+S+++
Sbjct: 804 MVWQLLERMMKHGLNPTVVTYSSII 828



 Score =  258 bits (659), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 182/671 (27%), Positives = 310/671 (46%), Gaps = 60/671 (8%)

Query: 79  VSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESG 138
           V+D F+A VS  +            P  AL FF  V  +PG +        +L++L    
Sbjct: 53  VADLFRAPVSPLD------------PATALAFFECVARRPGFRHTAASHAALLQLLARRR 100

Query: 139 LLRSAYWVVETVVCVN---------MHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMV 189
              +   +V +++  +         +  I  +   GG    +S K  +L L    +  M 
Sbjct: 101 APANYDKLVLSMISCSGTAEDVREAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMT 160

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           E    +++ +++ GLLPD    N +I      G    A   + ++ E G++    T N +
Sbjct: 161 EYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNAL 220

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           L  +C+  ++++A  LL  M   GC  N  +Y +LI G      + +A  L+  M+  G 
Sbjct: 221 LLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGC 280

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
            ++ H+Y  +I G  ++G + +A  L +EM  RGV P++ TYN +I G CK GR+ DA  
Sbjct: 281 SLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALG 340

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
               M +    PD  +YN+L+YG C  G + EA  L +   +R   PTV+T+  LI+G C
Sbjct: 341 IKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYC 399

Query: 430 RYGDLEVAQQLKENMINQ-----------------------------------GILPDVI 454
           +   ++ A ++K NMI+                                    G+ P+V+
Sbjct: 400 KAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVV 459

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
           TYT +++G CK+G +  A E F  M  +G  P+ + Y + I G ++     +A  L  +M
Sbjct: 460 TYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKM 519

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
              G  P +ITY  L+ G CK    + A  L   M  +G  PD   Y  +  A  + G  
Sbjct: 520 QEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSG-- 577

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
            R  + ++ ++RKG+  T VTYT L+   +  G  + A +   +M  +G + ++ TY+ L
Sbjct: 578 -RAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVL 636

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           +  LC+ +++++A  +   M   G+  N   YTI+I+E    G    A  L+ EM+    
Sbjct: 637 LQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGH 696

Query: 695 EPDYCTHSALL 705
           +P   T++  +
Sbjct: 697 KPSATTYTVFI 707



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 159/547 (29%), Positives = 263/547 (48%), Gaps = 21/547 (3%)

Query: 162 LIGGGLSSCVSIKILDLLLLI--YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLR 219
           L+ G ++   +  ++    LI  Y K   ++  L V + M+ +    D++    +I VL 
Sbjct: 375 LLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLI 434

Query: 220 DNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGV 279
                 +A+E    M   G+ P++VTY +++D +CK G +  ALE+   M+  GC PN  
Sbjct: 435 KKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAW 494

Query: 280 TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
           TY  LI G  ++ +L +A  LI  M + G+     +Y  +I G  +K     A  L E M
Sbjct: 495 TYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMM 554

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
              G+ P    YN+L   LCK GR  +A   +  ++RK V+   ++Y +L+ G+ ++GN 
Sbjct: 555 EQNGLTPDEQAYNVLTDALCKSGRAEEA---YSFLVRKGVVLTKVTYTSLVDGFSKAGNT 611

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
             A +L +++ +      + TY+ L+  LC+   L  A  + + M   G+  +++ YTI+
Sbjct: 612 DFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTII 671

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           ++   K G    A+  FNEM+  G +P    YT  I+   K+G   EA  L  EM   G 
Sbjct: 672 ISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGV 731

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG------- 572
            PD++TYN+ ++G   +G ++ A   L++MV     P+  TY  ++   L+M        
Sbjct: 732 TPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYV 791

Query: 573 ---------DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
                    +L     L   M++ GL+PT+VTY+ +I       RLE A +    M  K 
Sbjct: 792 DTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKD 851

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
           I PN   Y  LI   C ++   +A     DM E G  P   +Y  LI   C+ G++  A 
Sbjct: 852 ISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAK 911

Query: 684 RLYKEML 690
            L+ ++L
Sbjct: 912 SLFCDLL 918



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 172/667 (25%), Positives = 295/667 (44%), Gaps = 75/667 (11%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSA----YWVVETVVCVNMH------------------ 156
           G +R+E+ +  +++ L E+  +R A    + +V     +N+H                  
Sbjct: 244 GCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDA 303

Query: 157 -GILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRII 215
            G+LD +   G+    S+   + ++  Y K   ++  L +   M +NG  PD    N +I
Sbjct: 304 RGLLDEMPLRGVVP--SVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLI 361

Query: 216 KVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCS 275
             L       +A E+       G  P+++T+  +++ +CK   + +AL +   M    C 
Sbjct: 362 YGLCGGKLD-EAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCK 420

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
            +   Y VLI    +   L++A+  + +M   GL  +  +Y  II GY + G++  AL +
Sbjct: 421 LDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEV 480

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
            + M   G  P   TY  LIYGL +  ++  A     +M    + P +I+Y TL+ G C+
Sbjct: 481 FKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCK 540

Query: 396 SGNIGEAFLLFDELRSRNLVP--------------------------------TVVTYNT 423
                 AF LF+ +    L P                                T VTY +
Sbjct: 541 KHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTS 600

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           L+DG  + G+ + A  L E M+N+G   D+ TY++++   CK   L+ A    ++M   G
Sbjct: 601 LVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSG 660

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           ++ +  AYT  I+  +K G    A  L  EM++ G  P   TY V +   CK+G +EEA 
Sbjct: 661 VKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAE 720

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL---- 599
            L+ +M  DG  PD +TY   I+    MG + R       M+     P   TY +L    
Sbjct: 721 HLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHF 780

Query: 600 -----IHAHAARG-------RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
                I+AH            L + +     M   G+ P V+TY+++I G C+  R+++A
Sbjct: 781 LKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEA 840

Query: 648 YGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLK 707
             L   M  + I PN+  YT+LI   C+   + +A+    +M++   +P   ++  L++ 
Sbjct: 841 CVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVG 900

Query: 708 QLDK-DY 713
             D+ DY
Sbjct: 901 LCDEGDY 907



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 137/506 (27%), Positives = 225/506 (44%), Gaps = 19/506 (3%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K  MV   L VF  M   G  P+      +I  L  +    KA  +   M E GI P 
Sbjct: 468 YCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPG 527

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           ++TY T++   CK+ E   A  L   M+  G +P+   YNVL     ++G  E+A     
Sbjct: 528 VITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSF-- 585

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            +++ G+ ++  +Y  ++ G+S+ G    A  L E+MV  G    L TY++L+  LCK  
Sbjct: 586 -LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQK 644

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           ++++A     +M    V  +I++Y  ++    + G    A  LF+E+ S    P+  TY 
Sbjct: 645 KLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYT 704

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
             I   C+ G +E A+ L   M   G+ PDV+TY I +NG   MG +  A      M+  
Sbjct: 705 VFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDA 764

Query: 483 GLQPDRFAYTTQIAGELKLG-------DTSE---------AYRLQEEMLAKGFPPDLITY 526
             +P+ + Y   +   LK+        DTS           ++L E M+  G  P ++TY
Sbjct: 765 SCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTY 824

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           + ++ G CK   LEEA  LL  M+G    P+   YT +I    ++    +      +M+ 
Sbjct: 825 SSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIE 884

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
            G  P L +Y  LI      G  + A   F ++       N + +  L +GL +   +D 
Sbjct: 885 FGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDF 944

Query: 647 AYGLFIDMEEEGILPNKYTYTILINE 672
              L   M+      +  +Y++L + 
Sbjct: 945 CSQLLAAMDNRHCRIDSESYSMLTDS 970



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/443 (22%), Positives = 182/443 (41%), Gaps = 34/443 (7%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           A R F  +E Q G+  DE  +  + + L +SG    AY  +             V  G  
Sbjct: 547 AFRLFEMME-QNGLTPDEQAYNVLTDALCKSGRAEEAYSFL-------------VRKGVV 592

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
           L+      ++D     ++K    +   ++  KM+  G   D+   + +++ L       +
Sbjct: 593 LTKVTYTSLVD----GFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNE 648

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A  +   M   G+K +IV Y  ++    KEG+   A  L  EM   G  P+  TY V I+
Sbjct: 649 ALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFIS 708

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
            + + G +E+A  LI +M + G+     +YN  I G    G +  A +  + MV     P
Sbjct: 709 SYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEP 768

Query: 347 TLATYNILI----------------YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
              TY +L+                 G+  W  ++        M++  + P +++Y++++
Sbjct: 769 NCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSII 828

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
            G+C++  + EA +L D +  +++ P    Y  LI   C       A     +MI  G  
Sbjct: 829 AGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQ 888

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
           P + +Y  ++ G C  G+   A+  F ++L      +  A+     G LK G      +L
Sbjct: 889 PQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQL 948

Query: 511 QEEMLAKGFPPDLITYNVLVHGL 533
              M  +    D  +Y++L   +
Sbjct: 949 LAAMDNRHCRIDSESYSMLTDSI 971


>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
          Length = 876

 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 158/497 (31%), Positives = 248/497 (49%), Gaps = 4/497 (0%)

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           VY  + + G+ P  VTYNTM+ S+CKEG++  A      +   G  P   T N L+ G+ 
Sbjct: 55  VYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYC 114

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           R GEL +A  L   M  +G + + +SY  +I G  +   + +AL L   M   G +P + 
Sbjct: 115 RTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVR 174

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
            +  LI GLCK GRV DAR  F  M +  V+P +++YN ++ GY + G + +A  + + +
Sbjct: 175 AFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELM 234

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
                 P   TYNTLI GLC     E A++L  N + +G  P V+T+T ++NG C     
Sbjct: 235 EKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKF 293

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A    N+M+    + D   +   I   +K     EA  L  E+ A G  P++ITY  +
Sbjct: 294 DDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSI 353

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           + G CK G ++ A E+L+ M  DG  P+  TY S+++  ++   L +   L   M + G+
Sbjct: 354 IDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGI 413

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
            P ++TYT L+         + AF  F  M+  G++P+   Y  L + LC+  R ++AY 
Sbjct: 414 IPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYS 473

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQL 709
             +    +G+   K  YT LI+    AGN   A  L + M+D    PD  T+S LL    
Sbjct: 474 FIV---RKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALC 530

Query: 710 DKDYKVHAVEYLESLTL 726
            +     A+  L+ ++L
Sbjct: 531 KQKRLNEALPILDQMSL 547



 Score =  252 bits (644), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 163/517 (31%), Positives = 254/517 (49%), Gaps = 39/517 (7%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V + L++F  M R+G  P+V+    +I  L  +G    AR ++  M + G+ PS++TYN 
Sbjct: 154 VRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNA 213

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           M+  + K G M +AL++   M+  GC P+  TYN LI G   + + E+A  L+ + +K G
Sbjct: 214 MIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEG 272

Query: 309 LKVSAHSYNPIICGYS-----------------------------------EKGLLVEAL 333
              +  ++  +I GY                                    +K  L EA 
Sbjct: 273 FTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAK 332

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
            L  E+   G+ P + TY  +I G CK G+V  A      M R    P+  +YN+L+YG 
Sbjct: 333 ELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGL 392

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
            +   + +A  L  +++   ++P V+TY TL+ G C   D + A +L E M   G+ PD 
Sbjct: 393 VKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDE 452

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
             Y ++ +  CK G    A E ++ ++RKG+   +  YTT I G  K G+T  A  L E 
Sbjct: 453 HAYAVLTDALCKAGR---AEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIER 509

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           M+ +G  PD  TY+VL+H LCK   L EA  +L +M   G       YT +I   L  G 
Sbjct: 510 MIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGK 569

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
               + ++N M   G  P+  TYTV I+++   GRLE A     +M+ +G+ P+V+TYN 
Sbjct: 570 HDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNI 629

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
           LI+G   +  ID+A+     M      PN +TY +L+
Sbjct: 630 LIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLL 666



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 171/556 (30%), Positives = 266/556 (47%), Gaps = 6/556 (1%)

Query: 171 VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV 230
           +S K  +  L    +  M E    V+++++++GLLPD    N +IK     G    A   
Sbjct: 31  LSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRY 90

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
           +R++ E G++P   T N ++  +C+ GE+++A  L   M   GC  N  +Y +LI G   
Sbjct: 91  FRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCD 150

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
              + +A  L   M + G   +  ++  +I G  + G + +A  L + M   GV P++ T
Sbjct: 151 AKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMT 210

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKN-VIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           YN +I G  K GR++DA  +  E++ KN   PD  +YNTL+YG C      EA  L +  
Sbjct: 211 YNAMIVGYSKLGRMNDAL-KIKELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNA 268

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
                 PTVVT+  LI+G C     + A ++K  M++     D+  +  ++N   K   L
Sbjct: 269 VKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRL 328

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A+E  NE+   GL P+   YT+ I G  K G    A  + + M   G  P+  TYN L
Sbjct: 329 KEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSL 388

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           ++GL K   L +A  LL KM  DG IP+ ITYT+++    +  D      LF  M + GL
Sbjct: 389 MYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGL 448

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
            P    Y VL  A    GR E A+ +      KG+    + Y  LI+G  +    D A  
Sbjct: 449 KPDEHAYAVLTDALCKAGRAEEAYSFIVR---KGVALTKVYYTTLIDGFSKAGNTDFAAT 505

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQL 709
           L   M +EG  P+ YTY++L++  C      EAL +  +M  R I+     ++ L+ + L
Sbjct: 506 LIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEML 565

Query: 710 DKDYKVHAVEYLESLT 725
            +    HA      +T
Sbjct: 566 REGKHDHAKRMYNEMT 581



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 160/574 (27%), Positives = 264/574 (45%), Gaps = 51/574 (8%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           S+   + +++ Y+K   +   L +   M +NG  PD    N +I  L D   + +A E+ 
Sbjct: 207 SVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQK-TEEAEELL 265

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
               + G  P++VT+  +++ +C   +  +AL +  +M    C  +   +  LI    + 
Sbjct: 266 NNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKK 325

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
             L++A+ L+ ++   GL  +  +Y  II GY + G +  AL + + M   G  P   TY
Sbjct: 326 DRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTY 385

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           N L+YGL K  ++  A     +M +  +IP++I+Y TLL G C   +   AF LF+ +  
Sbjct: 386 NSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQ 445

Query: 412 RNLVP--------------------------------TVVTYNTLIDGLCRYGDLEVAQQ 439
             L P                                T V Y TLIDG  + G+ + A  
Sbjct: 446 NGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAAT 505

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           L E MI++G  PD  TY+++++  CK   L+ A    ++M  +G++   FAYT  I   L
Sbjct: 506 LIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEML 565

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           + G    A R+  EM + G  P   TY V ++  CK G LE+A +L+ KM  +G  PD +
Sbjct: 566 REGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVV 625

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG------------ 607
           TY  +I     MG + R       M+     P   TY +L+  H  +G            
Sbjct: 626 TYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLK-HLLKGNLAYVRSVDTSG 684

Query: 608 -----RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
                 L++ +     M   G+ P V TY++LI G C+  R+++A  L   M  +G+ PN
Sbjct: 685 MWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPN 744

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
           +  YT+LI   C+   +++AL     M +   +P
Sbjct: 745 EDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQP 778



 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 151/526 (28%), Positives = 254/526 (48%), Gaps = 21/526 (3%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y      +  L + NKM+ +    D++   ++I  L       +A+E+   +   G+ P+
Sbjct: 287 YCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPN 346

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           ++TY +++D +CK G++  ALE+L  M+  GC PN  TYN L+ G  ++ +L +A  L+ 
Sbjct: 347 VITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLT 406

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M K G+  +  +Y  ++ G  ++     A  L E M   G+ P    Y +L   LCK G
Sbjct: 407 KMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG 466

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R  +A   +  ++RK V    + Y TL+ G+ ++GN   A  L + +      P   TY+
Sbjct: 467 RAEEA---YSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYS 523

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            L+  LC+   L  A  + + M  +GI   +  YTI+++   + G    A+  +NEM   
Sbjct: 524 VLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSS 583

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G +P    YT  I    K G   +A  L  +M  +G  PD++TYN+L+ G   +G ++ A
Sbjct: 584 GHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRA 643

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD-----------------LFNNML 585
              L++MVG    P++ TY  ++   L+ G+L   R                  L   M+
Sbjct: 644 FSTLKRMVGASCEPNYWTYCLLLKHLLK-GNLAYVRSVDTSGMWNLIELDITWQLLERMV 702

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
           + GL+PT+ TY+ LI      GRLE A +    M  KG+ PN   Y  LI   C  +  +
Sbjct: 703 KHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFE 762

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           +A      M E G  P   +Y +L+   CN G++++   L+ ++L+
Sbjct: 763 KALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLE 808



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 152/527 (28%), Positives = 242/527 (45%), Gaps = 20/527 (3%)

Query: 168 SSC-VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
           S C + +++   L+    KK  +++   + N++  NGL+P+V     II     +G    
Sbjct: 306 SKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDI 365

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A EV +MM   G +P+  TYN+++    K+ ++ +A+ LL +MQ  G  PN +TY  L+ 
Sbjct: 366 ALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQ 425

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G     + + A  L   M + GLK   H+Y  +     + G   EA +    +V +GVA 
Sbjct: 426 GQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF---IVRKGVAL 482

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
           T   Y  LI G  K G    A      M+ +   PD  +Y+ LL+  C+   + EA  + 
Sbjct: 483 TKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPIL 542

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
           D++  R +  T+  Y  LID + R G  + A+++   M + G  P   TYT+ +N  CK 
Sbjct: 543 DQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKE 602

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G L  A +   +M R+G+ PD   Y   I G   +G    A+   + M+     P+  TY
Sbjct: 603 GRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTY 662

Query: 527 NVLVH----------------GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
            +L+                 G+  L  L+   +LL +MV  G  P   TY+S+I    +
Sbjct: 663 CLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCK 722

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
            G L     L ++M  KGLSP    YT+LI         E A  + S M   G +P + +
Sbjct: 723 AGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLES 782

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
           Y  L+ GLC     ++   LF D+ E G   ++  + IL +    AG
Sbjct: 783 YRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAG 829



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 135/506 (26%), Positives = 224/506 (44%), Gaps = 19/506 (3%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K   V+  L V   M R+G  P+    N ++  L  +    KA  +   M + GI P+
Sbjct: 357 YCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPN 416

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           ++TY T+L   C E +   A  L   M+  G  P+   Y VL     + G  E+A   I 
Sbjct: 417 VITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI- 475

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
             ++ G+ ++   Y  +I G+S+ G    A  L E M+  G  P   TY++L++ LCK  
Sbjct: 476 --VRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQK 533

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R+++A     +M  + +   I +Y  L+    R G    A  +++E+ S    P+  TY 
Sbjct: 534 RLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYT 593

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
             I+  C+ G LE A+ L   M  +G+ PDV+TY I+++G   MG +  A      M+  
Sbjct: 594 VFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGA 653

Query: 483 GLQPDRFAY----------------TTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
             +P+ + Y                +   +G   L +    ++L E M+  G  P + TY
Sbjct: 654 SCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTY 713

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           + L+ G CK G LEEA  LL  M G G  P+   YT +I    +     +     + M  
Sbjct: 714 SSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSE 773

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
            G  P L +Y +L+      G  E     F ++   G   + + +  L +GL +   +D 
Sbjct: 774 CGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDI 833

Query: 647 AYGLFIDMEEEGILPNKYTYTILINE 672
            + +   ME+     +  TY ++ N+
Sbjct: 834 CFQMLSIMEKRYCCISSQTYALVTNK 859


>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 889

 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 158/506 (31%), Positives = 269/506 (53%), Gaps = 2/506 (0%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P+    N +I      G +  A   + +M E G  P++VT+NT++++FCKEG + EA +L
Sbjct: 299 PNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKL 358

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
              ++  G SPN + YN L+ G+ +  E++QA  L  +M K G+     ++N ++ G+ +
Sbjct: 359 FDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYK 418

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
            G   +   L +++   G+ P  + ++I + GLC  GR+ +A     +ML K + P II+
Sbjct: 419 YGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIA 478

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           +N+++  Y ++G   +AF  +  +    L P+  T ++L+ GL   G L+ A +L   MI
Sbjct: 479 FNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMI 538

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
            +G+  + + +T++++   K G++  A+  + EM R+G+ PD  A++  I G  K G   
Sbjct: 539 EKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVE 598

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           EAY +  EML KG  P+   YN L+ G CK G L EA +L + M   G +PD  T   II
Sbjct: 599 EAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMII 658

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
               + G +R   ++F +M + GLSP ++TY  LI+ +     +  A    + M   G  
Sbjct: 659 GGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSN 718

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           P++ TYN  I+G C  RR+++A  +  ++   GI+PN  TY  ++N  C +     A+ L
Sbjct: 719 PDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVC-SDILDRAMIL 777

Query: 686 YKEMLDREIEPDYCTHSALLLKQLDK 711
              +L     P+  T + LLL Q  K
Sbjct: 778 TARLLKMAFVPNVVT-ANLLLSQFYK 802



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 148/487 (30%), Positives = 253/487 (51%), Gaps = 1/487 (0%)

Query: 186 KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVT 245
           +      L  FN M+  G  P V   N +I      G  V+AR+++  + E G  P+ + 
Sbjct: 314 RGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIM 373

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           YNT+++ + K  E+ +A  L  EM+ +G +P+G+T+N+L++G  + G  E    L++D+ 
Sbjct: 374 YNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDIS 433

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
            LGL      ++  + G    G L EA+    +M+ +G++P++  +N +I    + G   
Sbjct: 434 VLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLED 493

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
            A   +  M+   + P   + ++LL G   +G + EA  L  ++  + L    + +  L+
Sbjct: 494 KAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLL 553

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           D   + GD+  AQ L   M  +GI PDV+ ++  ++G  K G +  A   F EMLRKGL 
Sbjct: 554 DKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLI 613

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           P+ FAY + I G  K G  +EA +L++ M  +G  PD+ T N+++ GLCK G +  A  +
Sbjct: 614 PNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINV 673

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
              M   G  PD ITY ++I+   +  D+    +L N M   G +P L TY + IH   +
Sbjct: 674 FMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCS 733

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
             R+  A +   E+   GI PN +TYN+++NG+C    +D+A  L   + +   +PN  T
Sbjct: 734 SRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVCS-DILDRAMILTARLLKMAFVPNVVT 792

Query: 666 YTILINE 672
             +L+++
Sbjct: 793 ANLLLSQ 799



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 147/499 (29%), Positives = 254/499 (50%)

Query: 207 DVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELL 266
           D    + +++   +     +A E+   M E G++PS      +     + G+     +L 
Sbjct: 195 DFSVLDSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLF 254

Query: 267 WEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEK 326
            ++  RG  P   T++ +I GF R G +     L+  M K   + +A +YN +I     +
Sbjct: 255 KDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIR 314

Query: 327 GLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISY 386
           G   +AL     M+ RG  PT+ T+N +I   CK G V +AR  F  +      P+ I Y
Sbjct: 315 GRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMY 374

Query: 387 NTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMIN 446
           NTL+ GY +   I +A +L++E+R + + P  +T+N L+ G  +YG  E   +L +++  
Sbjct: 375 NTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISV 434

Query: 447 QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSE 506
            G+LPD   + I V+G C  G L  A EF  +ML KGL P   A+ + IA   + G   +
Sbjct: 435 LGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDK 494

Query: 507 AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
           A+   + M+  G  P   T + L+ GL   G L+EA EL+ +M+  G   +++ +T ++ 
Sbjct: 495 AFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLD 554

Query: 567 ASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRP 626
              + GD+   + L+  M R+G+ P +V ++  I   + +G +E A+  F EM  KG+ P
Sbjct: 555 KFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIP 614

Query: 627 NVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLY 686
           N   YN+LI G C+  ++++A  L   M   G+LP+ +T  ++I   C  G  + A+ ++
Sbjct: 615 NNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVF 674

Query: 687 KEMLDREIEPDYCTHSALL 705
            +M    + PD  T++ L+
Sbjct: 675 MDMHQTGLSPDIITYNTLI 693



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 146/511 (28%), Positives = 252/511 (49%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F  ++R G  P     + II      G       +  +M +F  +P+   YN ++++ C
Sbjct: 253 LFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACC 312

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
             G   +AL     M  RGC+P  VT+N +I  F + G + +AR L   + ++G   +A 
Sbjct: 313 IRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAI 372

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
            YN ++ GY +   + +A  L EEM  +G+AP   T+NIL+ G  K+GR  D      ++
Sbjct: 373 MYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDI 432

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
               ++PD   ++  + G C +G + EA     ++  + L P+++ +N++I    + G  
Sbjct: 433 SVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLE 492

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A +  + M++ G+ P   T + ++ G    G L  A E   +M+ KGL  +  A+T  
Sbjct: 493 DKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVL 552

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           +    K GD   A  L  EM  +G  PD++ ++  + GL K G +EEA  +  +M+  G 
Sbjct: 553 LDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGL 612

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
           IP++  Y S+I    + G L     L   M  +GL P + T  ++I     +GR+  A  
Sbjct: 613 IPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAIN 672

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F +M   G+ P++ITYN LING C+   +  A  L   M   G  P+  TY I I+  C
Sbjct: 673 VFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFC 732

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           ++     A+ +  E++   I P+  T++++L
Sbjct: 733 SSRRMNRAVLMLDELVSAGIVPNTVTYNSML 763



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 124/413 (30%), Positives = 203/413 (49%), Gaps = 40/413 (9%)

Query: 166 GLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSV 225
           GLS   SI   + ++  Y++  + ++    +  M+  GL P    C+ ++  L  NG   
Sbjct: 471 GLSP--SIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQ 528

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           +A E+   M E G+  + + +  +LD F K G++  A  L  EM+ RG  P+ V ++  I
Sbjct: 529 EATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFI 588

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            G S+ G +E+A  +  +ML+ GL  +  +YN +ICG+ + G L EAL LE+ M  RG+ 
Sbjct: 589 DGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLL 648

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P + T N++I GLCK GR+  A + F +M +  + PDII+YNTL+ GYC++ ++  A  L
Sbjct: 649 PDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNL 708

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
            + + +    P + TYN  I G C    +  A  + + +++ GI+P+ +TY  M+NG C 
Sbjct: 709 VNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVC- 767

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
                      +++L      DR                  A  L   +L   F P+++T
Sbjct: 768 -----------SDIL------DR------------------AMILTARLLKMAFVPNVVT 792

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI--IHASLEMGDLRR 576
            N+L+    K G  E       K+    +  D ITY  +   H  LE  D  R
Sbjct: 793 ANLLLSQFYKQGMPERTLMWGHKLSEIPYAFDEITYKIMDKAHHILEDADFSR 845



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 153/306 (50%)

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           +A  +   +R   + P+      L   L R GD     +L +++I +G  P   T++ ++
Sbjct: 214 QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGII 273

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
            G C+ G + +     + M +   +P+ FAY   I      G TS+A      M+ +G  
Sbjct: 274 LGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCN 333

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           P ++T+N +++  CK G++ EA +L   +   GF P+ I Y ++++  ++M ++ +   L
Sbjct: 334 PTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANML 393

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
           +  M +KG++P  +T+ +L+  H   GR E       ++ V G+ P+   ++  ++GLC 
Sbjct: 394 YEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCW 453

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
             R+D+A    +DM E+G+ P+   +  +I     AG   +A   YK M+   + P   T
Sbjct: 454 AGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPST 513

Query: 701 HSALLL 706
            S+LL+
Sbjct: 514 CSSLLM 519



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 155/330 (46%), Gaps = 4/330 (1%)

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
           R G+ G  + LF ++  R   P   T++ +I G CR G + + + L   M      P+  
Sbjct: 243 RVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAF 302

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
            Y I++N  C  G  S A  +FN M+ +G  P    + T I    K G+  EA +L + +
Sbjct: 303 AYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGL 362

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
              GF P+ I YN L++G  K+  +++AN L  +M   G  PD IT+  ++    + G  
Sbjct: 363 KEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGRE 422

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
             G  L  ++   GL P    + + +      GRL+ A  +  +M  KG+ P++I +N++
Sbjct: 423 EDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSV 482

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           I    +    D+A+  +  M   G+ P+  T + L+      G  QEA  L  +M+++ +
Sbjct: 483 IAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGL 542

Query: 695 EPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
             +    + L    LDK +K   V   +SL
Sbjct: 543 SVNNMAFTVL----LDKFFKRGDVVGAQSL 568


>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
 gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
          Length = 991

 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 158/497 (31%), Positives = 248/497 (49%), Gaps = 4/497 (0%)

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           VY  + + G+ P  VTYNTM+ S+CKEG++  A      +   G  P   T N L+ G+ 
Sbjct: 170 VYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYC 229

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           R GEL +A  L   M  +G + + +SY  +I G  +   + +AL L   M   G +P + 
Sbjct: 230 RTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVR 289

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
            +  LI GLCK GRV DAR  F  M +  V+P +++YN ++ GY + G + +A  + + +
Sbjct: 290 AFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELM 349

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
                 P   TYNTLI GLC     E A++L  N + +G  P V+T+T ++NG C     
Sbjct: 350 EKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKF 408

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A    N+M+    + D   +   I   +K     EA  L  E+ A G  P++ITY  +
Sbjct: 409 DDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSI 468

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           + G CK G ++ A E+L+ M  DG  P+  TY S+++  ++   L +   L   M + G+
Sbjct: 469 IDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGI 528

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
            P ++TYT L+         + AF  F  M+  G++P+   Y  L + LC+  R ++AY 
Sbjct: 529 IPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYS 588

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQL 709
             +    +G+   K  YT LI+    AGN   A  L + M+D    PD  T+S LL    
Sbjct: 589 FIV---RKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALC 645

Query: 710 DKDYKVHAVEYLESLTL 726
            +     A+  L+ ++L
Sbjct: 646 KQKRLNEALPILDQMSL 662



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 192/657 (29%), Positives = 299/657 (45%), Gaps = 27/657 (4%)

Query: 79  VSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIES- 137
           V+D F+A  + PE            P  AL FF W+  + G +        +L +L    
Sbjct: 57  VADLFRADSTAPE------------PATALAFFEWLARRDGFRHTADSHAALLHLLSRRR 104

Query: 138 GLLRSAYWVVETVVC--------VNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMV 189
              +    VV  + C        V+   I  +   G     +S K  +  L    +  M 
Sbjct: 105 APAQYERLVVSMLNCSDTAEDMRVSADAIQAIRRTGSARLALSPKCYNFALRSLARFDMT 164

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           E    V+++++++GLLPD    N +IK     G    A   +R++ E G++P   T N +
Sbjct: 165 EYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNAL 224

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           +  +C+ GE+++A  L   M   GC  N  +Y +LI G      + +A  L   M + G 
Sbjct: 225 VLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGC 284

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
             +  ++  +I G  + G + +A  L + M   GV P++ TYN +I G  K GR++DA  
Sbjct: 285 SPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDAL- 343

Query: 370 RFFEMLRKN-VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
           +  E++ KN   PD  +YNTL+YG C      EA  L +        PTVVT+  LI+G 
Sbjct: 344 KIKELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGY 402

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C     + A ++K  M++     D+  +  ++N   K   L  A+E  NE+   GL P+ 
Sbjct: 403 CMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNV 462

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             YT+ I G  K G    A  + + M   G  P+  TYN L++GL K   L +A  LL K
Sbjct: 463 ITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTK 522

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M  DG IP+ ITYT+++    +  D      LF  M + GL P    Y VL  A    GR
Sbjct: 523 MQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGR 582

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
            E A+ +      KG+    + Y  LI+G  +    D A  L   M +EG  P+ YTY++
Sbjct: 583 AEEAYSFIVR---KGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSV 639

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
           L++  C      EAL +  +M  R I+     ++ L+ + L +    HA      +T
Sbjct: 640 LLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMT 696



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 163/517 (31%), Positives = 254/517 (49%), Gaps = 39/517 (7%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V + L++F  M R+G  P+V+    +I  L  +G    AR ++  M + G+ PS++TYN 
Sbjct: 269 VRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNA 328

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           M+  + K G M +AL++   M+  GC P+  TYN LI G   + + E+A  L+ + +K G
Sbjct: 329 MIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEG 387

Query: 309 LKVSAHSYNPIICGYS-----------------------------------EKGLLVEAL 333
              +  ++  +I GY                                    +K  L EA 
Sbjct: 388 FTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAK 447

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
            L  E+   G+ P + TY  +I G CK G+V  A      M R    P+  +YN+L+YG 
Sbjct: 448 ELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGL 507

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
            +   + +A  L  +++   ++P V+TY TL+ G C   D + A +L E M   G+ PD 
Sbjct: 508 VKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDE 567

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
             Y ++ +  CK G    A E ++ ++RKG+   +  YTT I G  K G+T  A  L E 
Sbjct: 568 HAYAVLTDALCKAGR---AEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIER 624

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           M+ +G  PD  TY+VL+H LCK   L EA  +L +M   G       YT +I   L  G 
Sbjct: 625 MIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGK 684

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
               + ++N M   G  P+  TYTV I+++   GRLE A     +M+ +G+ P+V+TYN 
Sbjct: 685 HDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNI 744

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
           LI+G   +  ID+A+     M      PN +TY +L+
Sbjct: 745 LIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLL 781



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 160/574 (27%), Positives = 264/574 (45%), Gaps = 51/574 (8%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           S+   + +++ Y+K   +   L +   M +NG  PD    N +I  L D   + +A E+ 
Sbjct: 322 SVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQK-TEEAEELL 380

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
               + G  P++VT+  +++ +C   +  +AL +  +M    C  +   +  LI    + 
Sbjct: 381 NNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKK 440

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
             L++A+ L+ ++   GL  +  +Y  II GY + G +  AL + + M   G  P   TY
Sbjct: 441 DRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTY 500

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           N L+YGL K  ++  A     +M +  +IP++I+Y TLL G C   +   AF LF+ +  
Sbjct: 501 NSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQ 560

Query: 412 RNLVP--------------------------------TVVTYNTLIDGLCRYGDLEVAQQ 439
             L P                                T V Y TLIDG  + G+ + A  
Sbjct: 561 NGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAAT 620

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           L E MI++G  PD  TY+++++  CK   L+ A    ++M  +G++   FAYT  I   L
Sbjct: 621 LIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEML 680

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           + G    A R+  EM + G  P   TY V ++  CK G LE+A +L+ KM  +G  PD +
Sbjct: 681 REGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVV 740

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG------------ 607
           TY  +I     MG + R       M+     P   TY +L+  H  +G            
Sbjct: 741 TYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLK-HLLKGNLAYVRSVDTSG 799

Query: 608 -----RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
                 L++ +     M   G+ P V TY++LI G C+  R+++A  L   M  +G+ PN
Sbjct: 800 MWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPN 859

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
           +  YT+LI   C+   +++AL     M +   +P
Sbjct: 860 EDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQP 893



 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 151/526 (28%), Positives = 254/526 (48%), Gaps = 21/526 (3%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y      +  L + NKM+ +    D++   ++I  L       +A+E+   +   G+ P+
Sbjct: 402 YCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPN 461

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           ++TY +++D +CK G++  ALE+L  M+  GC PN  TYN L+ G  ++ +L +A  L+ 
Sbjct: 462 VITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLT 521

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M K G+  +  +Y  ++ G  ++     A  L E M   G+ P    Y +L   LCK G
Sbjct: 522 KMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG 581

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R  +A   +  ++RK V    + Y TL+ G+ ++GN   A  L + +      P   TY+
Sbjct: 582 RAEEA---YSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYS 638

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            L+  LC+   L  A  + + M  +GI   +  YTI+++   + G    A+  +NEM   
Sbjct: 639 VLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSS 698

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G +P    YT  I    K G   +A  L  +M  +G  PD++TYN+L+ G   +G ++ A
Sbjct: 699 GHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRA 758

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD-----------------LFNNML 585
              L++MVG    P++ TY  ++   L+ G+L   R                  L   M+
Sbjct: 759 FSTLKRMVGASCEPNYWTYCLLLKHLLK-GNLAYVRSVDTSGMWNLIELDITWQLLERMV 817

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
           + GL+PT+ TY+ LI      GRLE A +    M  KG+ PN   Y  LI   C  +  +
Sbjct: 818 KHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFE 877

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           +A      M E G  P   +Y +L+   CN G++++   L+ ++L+
Sbjct: 878 KALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLE 923



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 152/527 (28%), Positives = 242/527 (45%), Gaps = 20/527 (3%)

Query: 168 SSC-VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
           S C + +++   L+    KK  +++   + N++  NGL+P+V     II     +G    
Sbjct: 421 SKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDI 480

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A EV +MM   G +P+  TYN+++    K+ ++ +A+ LL +MQ  G  PN +TY  L+ 
Sbjct: 481 ALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQ 540

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G     + + A  L   M + GLK   H+Y  +     + G   EA +    +V +GVA 
Sbjct: 541 GQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF---IVRKGVAL 597

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
           T   Y  LI G  K G    A      M+ +   PD  +Y+ LL+  C+   + EA  + 
Sbjct: 598 TKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPIL 657

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
           D++  R +  T+  Y  LID + R G  + A+++   M + G  P   TYT+ +N  CK 
Sbjct: 658 DQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKE 717

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G L  A +   +M R+G+ PD   Y   I G   +G    A+   + M+     P+  TY
Sbjct: 718 GRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTY 777

Query: 527 NVLVH----------------GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
            +L+                 G+  L  L+   +LL +MV  G  P   TY+S+I    +
Sbjct: 778 CLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCK 837

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
            G L     L ++M  KGLSP    YT+LI         E A  + S M   G +P + +
Sbjct: 838 AGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLES 897

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
           Y  L+ GLC     ++   LF D+ E G   ++  + IL +    AG
Sbjct: 898 YRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAG 944



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 135/506 (26%), Positives = 224/506 (44%), Gaps = 19/506 (3%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K   V+  L V   M R+G  P+    N ++  L  +    KA  +   M + GI P+
Sbjct: 472 YCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPN 531

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           ++TY T+L   C E +   A  L   M+  G  P+   Y VL     + G  E+A   I 
Sbjct: 532 VITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI- 590

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
             ++ G+ ++   Y  +I G+S+ G    A  L E M+  G  P   TY++L++ LCK  
Sbjct: 591 --VRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQK 648

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R+++A     +M  + +   I +Y  L+    R G    A  +++E+ S    P+  TY 
Sbjct: 649 RLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYT 708

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
             I+  C+ G LE A+ L   M  +G+ PDV+TY I+++G   MG +  A      M+  
Sbjct: 709 VFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGA 768

Query: 483 GLQPDRFAY----------------TTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
             +P+ + Y                +   +G   L +    ++L E M+  G  P + TY
Sbjct: 769 SCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTY 828

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           + L+ G CK G LEEA  LL  M G G  P+   YT +I    +     +     + M  
Sbjct: 829 SSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSE 888

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
            G  P L +Y +L+      G  E     F ++   G   + + +  L +GL +   +D 
Sbjct: 889 CGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDI 948

Query: 647 AYGLFIDMEEEGILPNKYTYTILINE 672
            + +   ME+     +  TY ++ N+
Sbjct: 949 CFQMLSIMEKRYCCISSQTYALVTNK 974


>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Glycine max]
          Length = 875

 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 168/558 (30%), Positives = 276/558 (49%), Gaps = 70/558 (12%)

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           +Y  M    + P   T+N ++ S C+      AL+L  +M  +GC PN  T  +L+ G  
Sbjct: 137 LYSDMLAARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLC 196

Query: 290 RNGELEQARGLIRD--MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPT 347
           R G ++QA  L+ +    ++  +V    YN ++  +  + +  EA  L E M   GV P 
Sbjct: 197 RAGLVKQALELVNNNNSCRIANRVV---YNTLVSRFCREEMNNEAERLVERMNELGVLPD 253

Query: 348 LATYNILIYGLCKWGRVSDARHRFFEMLRKNVI----PDIISYNTLLYGYCRSGNIG--- 400
           + T+N  I  LC+ G+V +A   F +M     +    P+++++N +L G+C+ G +G   
Sbjct: 254 VVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDAR 313

Query: 401 --------------------------------EAFLLFDELRSRNLVPTVVTYNTLIDGL 428
                                           EA L+ DE+ ++ + P   TYN ++DGL
Sbjct: 314 GLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGL 373

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           CR   L  A+ L + M+  G+ PD + Y+ +++G C  G +  A+   +EM+R G QP+ 
Sbjct: 374 CRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNT 433

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
           +   T +    K G T EA  + ++M  K + PD +T N++V+GLC+ G L++A+E++ +
Sbjct: 434 YTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSE 493

Query: 549 MVGDG----------------------FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           M  +G                       +PD ITYT++I+   ++G L   +  F  ML 
Sbjct: 494 MWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLA 553

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
           K L P  VTY   I +   +G++  AF    +M+  G    + TYNALI GL    +I +
Sbjct: 554 KNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFE 613

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
            YGL  +M+E+GI P+  TY  +I   C  G  ++A+ L  EMLD+ I P+  +   +L+
Sbjct: 614 IYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFK-ILI 672

Query: 707 KQLDK--DYKVHAVEYLE 722
           K   K  D+KV A E  E
Sbjct: 673 KAFSKSSDFKV-ACELFE 689



 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 159/498 (31%), Positives = 238/498 (47%), Gaps = 37/498 (7%)

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG----CSPNGVTY 281
           +A  +   M E G+ P +VT+N+ + + C+ G++ EA  +  +MQ         PN VT+
Sbjct: 237 EAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTF 296

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
           N+++ GF ++G +  ARGL+  M K+G   S   YN  + G    G L+EA  + +EMV 
Sbjct: 297 NLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVA 356

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
           +G+ P   TYNI++ GLC+   +SDAR     M+R  V PD ++Y+TLL+GYC  G + E
Sbjct: 357 KGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFE 416

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           A  +  E+      P   T NTL+  L + G    A+++ + M  +   PD +T  I+VN
Sbjct: 417 AKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVN 476

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQ----------------------PDRFAYTTQIAGEL 499
           G C+ G L  A E  +EM   G                        PD   YTT I G  
Sbjct: 477 GLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLC 536

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           K+G   EA +   EMLAK   PD +TY+  +   CK G +  A  +L+ M  +G      
Sbjct: 537 KVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQ 596

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
           TY ++I        +     L + M  KG+SP + TY  +I      G+ + A     EM
Sbjct: 597 TYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEM 656

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLF-----IDMEEEGILPNKYTYTILINENC 674
             KGI PNV ++  LI    +      A  LF     I   +E +      Y+++ NE  
Sbjct: 657 LDKGISPNVSSFKILIKAFSKSSDFKVACELFEVALNICGRKEAL------YSLMFNELL 710

Query: 675 NAGNWQEALRLYKEMLDR 692
             G   EA  L++  LDR
Sbjct: 711 AGGQLSEAKELFEVSLDR 728



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 189/673 (28%), Positives = 308/673 (45%), Gaps = 85/673 (12%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           AL+ F  +  Q G   +EF    ++  L  +GL++ A  +V                   
Sbjct: 169 ALQLFEKM-PQKGCCPNEFTLGILVRGLCRAGLVKQALELVNNN---------------- 211

Query: 167 LSSC--VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS 224
            +SC   +  + + L+  + ++ M  +   +  +M   G+LPDV   N  I  L   G  
Sbjct: 212 -NSCRIANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKV 270

Query: 225 VKAREVYR---MMGEFGI-KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVT 280
           ++A  ++R   M  E G+ +P++VT+N ML  FCK G M +A  L+  M+  G   +   
Sbjct: 271 MEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLEC 330

Query: 281 YNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV 340
           YN+ + G  RNGEL +AR ++ +M+  G++ +A++YN ++ G     +L +A  L + M+
Sbjct: 331 YNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMM 390

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
             GV P    Y+ L++G C  G+V +A+    EM+R    P+  + NTLL+   + G   
Sbjct: 391 RNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTL 450

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG------------ 448
           EA  +  ++  +   P  VT N +++GLCR G+L+ A ++   M   G            
Sbjct: 451 EAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFAS 510

Query: 449 ----------ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
                      LPD ITYT ++NG CK+G L  A++ F EML K L+PD   Y T I   
Sbjct: 511 LINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSF 570

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
            K G  S A+R+ ++M   G    L TYN L+ GL     + E   L  +M   G  PD 
Sbjct: 571 CKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDI 630

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAAR------------ 606
            TY +II    E G  +    L + ML KG+SP + ++ +LI A +              
Sbjct: 631 CTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEV 690

Query: 607 -----GRLELAF-MYFSEMQVKG----------------IRPNVITYNALINGLCRLRRI 644
                GR E  + + F+E+   G                +      Y  LI  LC+  R+
Sbjct: 691 ALNICGRKEALYSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDERL 750

Query: 645 DQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML-----DREIEPDYC 699
             A  L   + ++G   +  ++  +I+     GN ++A  L K M+     DR ++  Y 
Sbjct: 751 ADANSLLYKLIDKGYGFDHASFMPVIDGLSKRGNKRQADELAKRMMELELEDRPVDRTYS 810

Query: 700 THSALLLKQLDKD 712
               ++  +L KD
Sbjct: 811 NRKRVIPGKLLKD 823



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 141/496 (28%), Positives = 233/496 (46%), Gaps = 38/496 (7%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGR--GCSPNGVTYNVLITGFSRNGELEQAR 298
           PS+++   M+    + G + +A+     ++ +    SP+   YN+L+    R+       
Sbjct: 79  PSLIS---MVRVLAQLGHVDDAITHFKSLRAQFPSLSPSLPLYNLLLRSTLRHHRPGFVS 135

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L  DML   +    +++N +I    E      AL L E+M  +G  P   T  IL+ GL
Sbjct: 136 WLYSDMLAARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGL 195

Query: 359 CKWGRVSDARHRFFEMLRKN---VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
           C+ G V  A     E++  N    I + + YNTL+  +CR     EA  L + +    ++
Sbjct: 196 CRAGLVKQA----LELVNNNNSCRIANRVVYNTLVSRFCREEMNNEAERLVERMNELGVL 251

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL----PDVITYTIMVNGSCKMGNLSM 471
           P VVT+N+ I  LCR G +  A ++  +M     L    P+V+T+ +M+ G CK G +  
Sbjct: 252 PDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGD 311

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           AR     M + G       Y   + G L+ G+  EA  + +EM+AKG  P+  TYN+++ 
Sbjct: 312 ARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMD 371

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           GLC+   L +A  L+  M+ +G  PD + Y++++H     G +   + + + M+R G  P
Sbjct: 372 GLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQP 431

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
              T   L+H+    GR   A     +M  K  +P+ +T N ++NGLCR   +D+A  + 
Sbjct: 432 NTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIV 491

Query: 652 IDMEEEG----------------------ILPNKYTYTILINENCNAGNWQEALRLYKEM 689
            +M   G                       LP+  TYT LIN  C  G  +EA + + EM
Sbjct: 492 SEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEM 551

Query: 690 LDREIEPDYCTHSALL 705
           L + + PD  T+   +
Sbjct: 552 LAKNLRPDSVTYDTFI 567



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 170/373 (45%), Gaps = 7/373 (1%)

Query: 358 LCKWGRVSDARHRFFEMLRK--NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
           L + G V DA   F  +  +  ++ P +  YN LL    R    G    L+ ++ +  + 
Sbjct: 88  LAQLGHVDDAITHFKSLRAQFPSLSPSLPLYNLLLRSTLRHHRPGFVSWLYSDMLAARVA 147

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P   T+N LI  LC     + A QL E M  +G  P+  T  I+V G C+ G +  A E 
Sbjct: 148 PQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQALEL 207

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
            N      +  +R  Y T ++   +    +EA RL E M   G  PD++T+N  +  LC+
Sbjct: 208 VNNNNSCRI-ANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCR 266

Query: 536 LGSLEEANELLRKMVGDGFI----PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
            G + EA+ + R M  D  +    P+ +T+  ++    + G +   R L   M + G   
Sbjct: 267 AGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFD 326

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
           +L  Y + +      G L  A +   EM  KGI PN  TYN +++GLCR   +  A GL 
Sbjct: 327 SLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLM 386

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDK 711
             M   G+ P+   Y+ L++  C+ G   EA  +  EM+    +P+  T + LL     +
Sbjct: 387 DLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKE 446

Query: 712 DYKVHAVEYLESL 724
              + A E L+ +
Sbjct: 447 GRTLEAEEMLQKM 459


>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
 gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 158/513 (30%), Positives = 263/513 (51%), Gaps = 14/513 (2%)

Query: 104 PRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLI 163
           P+  L FF ++ + P        +C+++  LI   + + A  ++  VV     G    + 
Sbjct: 90  PKSLLSFFDFLSSYPTFSHTVQSYCSMVHFLIAHRMNQQAESLLHFVVSRKGKGSASSVF 149

Query: 164 G------GGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
                  G LSS     + D L+ +YT+   V   +  F    ++ L      C  +++ 
Sbjct: 150 ASILETKGTLSSSF---VFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLER 206

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
           +      + A E Y  + + G  P++ T+N +++  CKEG++++A  +  E++  G  P 
Sbjct: 207 MIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPT 266

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
            V++N LI G+ ++G LE+   L   M +  +     +Y+ +I G  ++  L +A +L +
Sbjct: 267 AVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFK 326

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
           EM  RG+ P   T+  LI G CK GRV  A   + +M  K +  D++ YNTL+ G C+ G
Sbjct: 327 EMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGG 386

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
              EA     E+  R L+P   TY TL+DG C+ GDLE+A ++++ M+ +GI  D + +T
Sbjct: 387 YFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFT 446

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
            +++G C+ G +  A     EMLR GL+PD   YT  + G  K GD    ++L +EM + 
Sbjct: 447 AIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSD 506

Query: 518 GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
           G  P +ITYNVL++GLCK G ++ A+ LL  M+  G +PD ITY  ++    + G L   
Sbjct: 507 GHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKL--- 563

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIH--AHAARGR 608
            D  N     GL     +Y  L+H  + A++ R
Sbjct: 564 GDFQNVKTEMGLVSDYASYRSLLHELSKASKDR 596



 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 148/446 (33%), Positives = 235/446 (52%), Gaps = 5/446 (1%)

Query: 269 MQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
           ++ +G   +   ++ L++ ++  G +  A    R   K  LK+  +    ++    +   
Sbjct: 153 LETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLERMIKMSS 212

Query: 329 LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNT 388
            + AL    E++  G  P + T+N+L+  LCK G+V DA+  F E+ +  + P  +S+NT
Sbjct: 213 PMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNT 272

Query: 389 LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
           L+ GYC+SGN+ E F L   +    + P V TY+ LIDGLC+   LE A  L + M ++G
Sbjct: 273 LINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRG 332

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
           ++P+ +T+T ++NG CK G + +A E + +M  KGL+ D   Y T I G  K G   EA 
Sbjct: 333 LVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREAR 392

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
           +   EM  +G  PD  TY  L+ G CK G LE A E+ ++MV +G   D++ +T+II   
Sbjct: 393 KFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGL 452

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
              G +         MLR GL P   TYT+++     +G +++ F    EMQ  G  P V
Sbjct: 453 CRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGV 512

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
           ITYN L+NGLC+  ++  A  L   M   G++P+  TY IL+  +C  G   +   +  E
Sbjct: 513 ITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLGDFQNVKTE 572

Query: 689 MLDREIEPDYCTHSALL--LKQLDKD 712
           M    +  DY ++ +LL  L +  KD
Sbjct: 573 M---GLVSDYASYRSLLHELSKASKD 595


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 146/525 (27%), Positives = 267/525 (50%), Gaps = 19/525 (3%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
           F+ M+R+       +CN++I V         A  +YR M    I  +I ++N ++  FC 
Sbjct: 94  FDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCD 153

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI-------------- 301
             ++  +L    ++   G  P+ VT+N L+ G      + +A  L               
Sbjct: 154 CHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVAL 213

Query: 302 -RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
              M+++GL     ++N +I G   +G ++EA  L  +MV +G+   + TY  ++ G+CK
Sbjct: 214 FDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCK 273

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G    A +   +M   ++ PD++ Y+ ++   C+ G+  +A  LF E+  + + P V T
Sbjct: 274 MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 333

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YN +IDG C +G    AQ+L  +MI + I PDV+T+  +++ S K G L  A +  +EML
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 393

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            + + PD   Y + I G  K     +A  + + M +    PD++T+N ++   C+   ++
Sbjct: 394 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVD 449

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           E  +LLR++   G + +  TY ++IH   E+ +L   +DLF  M+  G+ P  +T  +L+
Sbjct: 450 EGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILL 509

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
           +      +LE A   F  +Q+  I  + + YN +I+G+C+  ++D+A+ LF  +   G+ 
Sbjct: 510 YGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 569

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           P+  TY ++I+  C      +A  L+ +M D   EPD  T++ L+
Sbjct: 570 PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 614



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 164/502 (32%), Positives = 249/502 (49%), Gaps = 12/502 (2%)

Query: 116 TQPGVKRDEFVFCTILEILIESGLLRSAY----WVVETVVCVNMHGILDVLIGGGLSSCV 171
           T+ G + D   F T+L  L     +  A     ++VET   +    + D ++  GL+  V
Sbjct: 168 TKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGF-LEAVALFDQMVEIGLTPVV 226

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
            I    L+  +  +  ++E   LV NKM+  GL  DV     I+  +   G +  A  + 
Sbjct: 227 -ITFNTLINGLCLEGRVLEAAALV-NKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLL 284

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M E  IKP +V Y+ ++D  CK+G   +A  L  EM  +G +PN  TYN +I GF   
Sbjct: 285 SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 344

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G    A+ L+RDM++  +     ++N +I    ++G L EA  L +EM+ R + P   TY
Sbjct: 345 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTY 404

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           N +IYG CK  R  DA+H F  M      PD++++NT++  YCR+  + E   L  E+  
Sbjct: 405 NSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISR 460

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           R LV    TYNTLI G C   +L  AQ L + MI+ G+ PD IT  I++ G C+   L  
Sbjct: 461 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 520

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A E F  +    +  D  AY   I G  K     EA+ L   +   G  PD+ TYNV++ 
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS 580

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           G C   ++ +AN L  KM  +G  PD+ TY ++I   L+ G++ +  +L + M   G S 
Sbjct: 581 GFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSG 640

Query: 592 TLVTYTVLIHAHAARGRLELAF 613
              T   ++      GRL+ +F
Sbjct: 641 DAFTIK-MVADLITDGRLDKSF 661



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 142/471 (30%), Positives = 230/471 (48%), Gaps = 19/471 (4%)

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLW---------------EMQGRGCSPNG 278
           + + G +P +VT+NT+L   C E  + EAL L                 +M   G +P  
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVV 226

Query: 279 VTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
           +T+N LI G    G + +A  L+  M+  GL +   +Y  I+ G  + G    ALNL  +
Sbjct: 227 ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSK 286

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
           M    + P +  Y+ +I  LCK G  SDA++ F EML K + P++ +YN ++ G+C  G 
Sbjct: 287 MEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGR 346

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
             +A  L  ++  R + P V+T+N LI    + G L  A++L + M+++ I PD +TY  
Sbjct: 347 WSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNS 406

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           M+ G CK      A+  F+ M      PD   + T I    +     E  +L  E+  +G
Sbjct: 407 MIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRG 462

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
              +  TYN L+HG C++ +L  A +L ++M+  G  PD IT   +++   E   L    
Sbjct: 463 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 522

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           +LF  +    +    V Y ++IH      +++ A+  F  + + G+ P+V TYN +I+G 
Sbjct: 523 ELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGF 582

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           C    I  A  LF  M++ G  P+  TY  LI     AG   +++ L  EM
Sbjct: 583 CGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 146/494 (29%), Positives = 251/494 (50%), Gaps = 19/494 (3%)

Query: 193 LLVFNKMLRNGLLPDVKNCN----------RIIKVLRDNGFSVK-----AREVYRMMGEF 237
           L  F K+ + G  PDV   N          RI + L   G+ V+     A  ++  M E 
Sbjct: 161 LSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEI 220

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G+ P ++T+NT+++  C EG + EA  L+ +M G+G   + VTY  ++ G  + G+ + A
Sbjct: 221 GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 280

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L+  M +  +K     Y+ II    + G   +A  L  EM+ +G+AP + TYN +I G
Sbjct: 281 LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDG 340

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
            C +GR SDA+    +M+ + + PD++++N L+    + G + EA  L DE+  R + P 
Sbjct: 341 FCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPD 400

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
            VTYN++I G C++   + A+ + + M +    PDV+T+  +++  C+   +    +   
Sbjct: 401 TVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLR 456

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           E+ R+GL  +   Y T I G  ++ + + A  L +EM++ G  PD IT N+L++G C+  
Sbjct: 457 EISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENE 516

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            LEEA EL   +       D + Y  IIH   +   +    DLF ++   G+ P + TY 
Sbjct: 517 KLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYN 576

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           V+I     +  +  A + F +M+  G  P+  TYN LI G  +   ID++  L  +M   
Sbjct: 577 VMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSN 636

Query: 658 GILPNKYTYTILIN 671
           G   + +T  ++ +
Sbjct: 637 GFSGDAFTIKMVAD 650



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/410 (32%), Positives = 209/410 (50%), Gaps = 19/410 (4%)

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
           A++L  +M  R +   + ++NILI   C   ++S +   F ++ +    PD++++NTLL+
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184

Query: 392 GYCRSGNIGEA-----------FL----LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
           G C    I EA           FL    LFD++    L P V+T+NTLI+GLC  G +  
Sbjct: 185 GLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
           A  L   M+ +G+  DV+TY  +VNG CKMG+   A    ++M    ++PD   Y+  I 
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIID 304

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
              K G  S+A  L  EML KG  P++ TYN ++ G C  G   +A  LLR M+     P
Sbjct: 305 RLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 364

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
           D +T+ ++I AS++ G L     L + ML + + P  VTY  +I+      R + A   F
Sbjct: 365 DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 424

Query: 617 SEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNA 676
             M      P+V+T+N +I+  CR +R+D+   L  ++   G++ N  TY  LI+  C  
Sbjct: 425 DLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEV 480

Query: 677 GNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
            N   A  L++EM+   + PD  T + LL    + +    A+E  E + +
Sbjct: 481 DNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQM 530



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 156/323 (48%), Gaps = 15/323 (4%)

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
           ++ +A   FD +       T V  N +I    R    +VA  L   M  + I  ++ ++ 
Sbjct: 86  SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG---ELKLGDT---------- 504
           I++   C    LS +   F ++ + G QPD   + T + G   E ++ +           
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205

Query: 505 --SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
              EA  L ++M+  G  P +IT+N L++GLC  G + EA  L+ KMVG G   D +TY 
Sbjct: 206 GFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
           +I++   +MGD +   +L + M    + P +V Y+ +I      G    A   FSEM  K
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
           GI PNV TYN +I+G C   R   A  L  DM E  I P+  T+  LI+ +   G   EA
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEA 385

Query: 683 LRLYKEMLDREIEPDYCTHSALL 705
            +L  EML R I PD  T+++++
Sbjct: 386 EKLCDEMLHRCIFPDTVTYNSMI 408


>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
 gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
          Length = 740

 Score =  258 bits (660), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 151/557 (27%), Positives = 294/557 (52%), Gaps = 4/557 (0%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           +I   ++L+  Y +    +  L +  ++L+NGL PD  + + I   ++D G   KA  ++
Sbjct: 13  TIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKD-GEVDKAHCLF 71

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M E G+ P I+  N+++   CK  EM +A  ++ +M   G +P+  TY+++I G  ++
Sbjct: 72  LEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKS 131

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
             +++A  ++  M++ G + ++ +YN +I GYS  G+  E++ + ++M + GV PT+   
Sbjct: 132 KAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNC 191

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN--IGEAFLLFDEL 409
           N  I+ L K GR ++A+  F  M+ K   PDIISY+T+L+GY  + +  + +   +F+ +
Sbjct: 192 NSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLM 251

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
            ++ + P    +N LI+   R G ++ A  + E+M N+G++PD +T+  +++  C++G L
Sbjct: 252 LTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRL 311

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY-NV 528
             A   FN M+  G+ P    Y   I G    G+  +A  L  EM+ K  PP  + Y + 
Sbjct: 312 DDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSS 371

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           +++ LCK G + E  +++  MV  G  P+ +T+ S++     +G++     L + M   G
Sbjct: 372 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 431

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
           + P    Y  L+  +   GR++ A   F +M  KG++P  + Y+ +++GL + RR   A 
Sbjct: 432 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAK 491

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQ 708
            +F +M E G   + +TY +++   C      EA  L +++    ++ D  T + ++   
Sbjct: 492 KMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAM 551

Query: 709 LDKDYKVHAVEYLESLT 725
                +  A E  ++++
Sbjct: 552 FKVGRRQEAKELFDAIS 568



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 137/468 (29%), Positives = 247/468 (52%), Gaps = 4/468 (0%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P+I TYN ++D + +       L ++  +   G  P+  +Y+ LI GF ++GE+++A  L
Sbjct: 12  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 70

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
             +M++ G+       N II    +   + +A ++ ++MV  G+AP L TY+++I GLCK
Sbjct: 71  FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 130

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
              +  A     +M+     P+ I+YN+L++GY  SG   E+  +F ++ S  ++PTV  
Sbjct: 131 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 190

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA--REFFNE 478
            N+ I  L ++G    A+ + ++M+ +G  PD+I+Y+ M++G     +  +A     FN 
Sbjct: 191 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 250

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           ML KG+ P++  +   I    + G   +A  + E+M  KG  PD +T+  ++  LC++G 
Sbjct: 251 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 310

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY-T 597
           L++A      MV  G  P    Y  +I      G+L + ++L + M+ K + P  V Y +
Sbjct: 311 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 370

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
            +I+     GR+         M   G RPNV+T+N+L+ G C +  +++A+ L   M   
Sbjct: 371 SIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 430

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           GI PN Y Y  L++  C  G   +AL ++++ML + ++P    +S +L
Sbjct: 431 GIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIIL 478



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 143/546 (26%), Positives = 265/546 (48%), Gaps = 38/546 (6%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  + K   V++   +F +M+  G+LP +  CN IIK L       KA  + + M + G
Sbjct: 54  LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 113

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS--------- 289
           I P + TY+ ++D  CK   M +A  +L +M   G  PN +TYN LI G+S         
Sbjct: 114 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 173

Query: 290 --------------------------RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGY 323
                                     ++G   +A+ +   M+  G K    SY+ ++ GY
Sbjct: 174 RVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGY 233

Query: 324 SEK--GLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           +      L +  N+   M+T+G+AP    +NILI    + G +  A   F +M  K +IP
Sbjct: 234 ATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIP 293

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           D +++ T++   CR G + +A   F+ +    + P+   Y  LI G C +G+L  A++L 
Sbjct: 294 DTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELI 353

Query: 442 ENMINQGILPDVITY-TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
             M+N+ I P  + Y + ++N  CK G ++  ++  + M++ G +P+   + + + G   
Sbjct: 354 SEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCL 413

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
           +G+  EA+ L + M + G  P+   Y  LV G CK G +++A  + R M+  G  P  + 
Sbjct: 414 VGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL 473

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           Y+ I+H   +       + +F+ M+  G + ++ TY V++         + A M   ++ 
Sbjct: 474 YSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLF 533

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
              ++ ++IT+N +I+ + ++ R  +A  LF  +   G++PN  TY+++I       +++
Sbjct: 534 AMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYE 593

Query: 681 EALRLY 686
           EA  L+
Sbjct: 594 EADNLF 599



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 154/596 (25%), Positives = 285/596 (47%), Gaps = 19/596 (3%)

Query: 93  LVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVC 152
           +++ L +++E  +      + V++  G+  D F +  I++ L +S  +  A  V+E +V 
Sbjct: 89  IIKELCKMKEMDKAESIVQKMVDS--GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMV- 145

Query: 153 VNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCN 212
                       G   + ++    + L+  Y+   M  + + VF +M   G++P V NCN
Sbjct: 146 ----------EAGTRPNSIT---YNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCN 192

Query: 213 RIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE--MQEALELLWEMQ 270
             I  L  +G + +A+ ++  M   G KP I++Y+TML  +    +  + +   +   M 
Sbjct: 193 SFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLML 252

Query: 271 GRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLV 330
            +G +PN   +N+LI  ++R G +++A  +  DM   G+     ++  +I      G L 
Sbjct: 253 TKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLD 312

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISY-NTL 389
           +AL+    MV  GV P+ A Y  LI G C  G +  A+    EM+ K++ P  + Y +++
Sbjct: 313 DALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSI 372

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
           +   C+ G + E   + D +      P VVT+N+L++G C  G++E A  L + M + GI
Sbjct: 373 INNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGI 432

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
            P+   Y  +V+G CK G +  A   F +ML KG++P    Y+  + G  +   T+ A +
Sbjct: 433 EPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKK 492

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           +  EM+  G    + TY V++ GLC+    +EAN LL K+       D IT+  +I A  
Sbjct: 493 MFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMF 552

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
           ++G  +  ++LF+ +   GL P + TY+++I         E A   F  ++  G   +  
Sbjct: 553 KVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSR 612

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
             N ++  L     + +A      + E  +     T ++L +     G ++E ++L
Sbjct: 613 LLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKL 668



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 115/376 (30%), Positives = 204/376 (54%), Gaps = 3/376 (0%)

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
           R   PT+ TYNILI    +  R          +L+  + PD  SY +L+YG+ + G + +
Sbjct: 8   RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDK 66

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           A  LF E+  + ++P ++  N++I  LC+  +++ A+ + + M++ GI PD+ TY+++++
Sbjct: 67  AHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIID 126

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
           G CK   +  A     +M+  G +P+   Y + I G    G  +E+ R+ ++M + G  P
Sbjct: 127 GLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIP 186

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD--LRRGRD 579
            +   N  +H L K G   EA  +   MV  G  PD I+Y++++H      D  L    +
Sbjct: 187 TVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHN 246

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
           +FN ML KG++P    + +LI+A+A  G ++ A + F +MQ KG+ P+ +T+  +I+ LC
Sbjct: 247 IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLC 306

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
           R+ R+D A   F  M + G+ P++  Y  LI   CN G   +A  L  EM++++I P   
Sbjct: 307 RIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 366

Query: 700 THSALLLKQLDKDYKV 715
            + + ++  L K+ +V
Sbjct: 367 KYFSSIINNLCKEGRV 382



 Score = 41.6 bits (96), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 35/181 (19%), Positives = 80/181 (44%)

Query: 169 SCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR 228
           + VSI    ++L    + +  ++  ++  K+    +  D+   N +I  +   G   +A+
Sbjct: 502 TTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAK 561

Query: 229 EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
           E++  +  +G+ P+I TY+ M+ +  KE   +EA  L   ++  G + +    N ++   
Sbjct: 562 ELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRML 621

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
               E+ +A   +  + +  L + A + + +   +S +G   E + L    +T  V    
Sbjct: 622 LNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKLLPANMTMAVVAAT 681

Query: 349 A 349
           A
Sbjct: 682 A 682


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  258 bits (660), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 152/464 (32%), Positives = 238/464 (51%), Gaps = 8/464 (1%)

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M   G  P+ VT+N +++ F K+G   +   LL  M  R   PN V+YN L+ G  +   
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 294 LEQARGLIRDMLKLGLKVSAH--SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
             +A  L+RDM+  G + +    +Y+ ++ GY + G + E+  L +E+++RG+ P    Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
             ++  LCK  R+ +A     EM+R    P +I++NTL+ G CR  N+  A  L  ++ +
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
             +   VVTYNTL+DGLC+ G L+ A+QL E M   G  PDV+ Y+  V G CK G +  
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK-GFPPDLITYNVLV 530
           A +   +M      P+   Y T + G  K G    A  + E+M +  G   +++ Y+ +V
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
            GLCKLG  +EA  ++  M   G  PD +TY+S+++   + G +    +    M  +G  
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR-----PNVITYNALINGLCRLRRID 645
           P  VTY  L+H   + GRL  A     EM   G       P+V TYNALI GLC+  RID
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRID 420

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
            A   F  M  +G  P+  +Y+ ++     +G   +A  +  E+
Sbjct: 421 DALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEV 464



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 153/462 (33%), Positives = 246/462 (53%), Gaps = 18/462 (3%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAR-----EVYRMMGEFGIKPSIVTYNTMLDSF 253
           M R G  P+    N ++     NGFS + R      +   M    I+P++V+YN +L+  
Sbjct: 1   MDRTGCPPNSVTFNALV-----NGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGL 55

Query: 254 CKEGEMQEALELLWEMQGRG--CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKV 311
           CK     EA EL+ +M  RG   +P+ VTY+ L++G+ + G++E++R L+++++  GL+ 
Sbjct: 56  CKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRP 115

Query: 312 SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRF 371
            A  Y  ++    +   L EAL L EEM+  G  PTL T+N LI G C+   +  A    
Sbjct: 116 DALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLL 175

Query: 372 FEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY 431
            +M    V  D+++YNTL+ G C++G + EA  L + +++    P VV Y++ + GLC+ 
Sbjct: 176 QKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKS 235

Query: 432 GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK-GLQPDRFA 490
           G +  A Q+ E M +    P+V+TY  +++G CK G +  A E   +M    G   +   
Sbjct: 236 GKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVG 295

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           Y+T + G  KLG T EA  + E M   G  PD++TY+ LV+GLCK G +EEA E +R+M 
Sbjct: 296 YSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMA 355

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM-----LRKGLSPTLVTYTVLIHAHAA 605
            +G  P+ +TY S++H     G L     +   M           P++ TY  LI     
Sbjct: 356 MEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCK 415

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
            GR++ A  +F  M+ +G  P+ ++Y+ ++ GL R  R  QA
Sbjct: 416 AGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 141/445 (31%), Positives = 239/445 (53%), Gaps = 8/445 (1%)

Query: 269 MQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
           M   GC PN VT+N L+ GFS+ G       L+  M    ++ +  SYN ++ G  +   
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 329 LVEALNLEEEMVTRG--VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISY 386
             EA  L  +M++RG    P + TY+ L+ G CK G+V ++R    E++ + + PD + Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 387 NTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMIN 446
             ++   C+S  +GEA  L +E+      PT++T+NTLI G CR  +LE+A  L + M  
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 447 QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSE 506
            G+  DV+TY  +++G CK G L  A +    M   G  PD  AY++ + G  K G   +
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 507 AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV-GDGFIPDHITYTSII 565
           A+++ E+M      P+++TYN ++ GLCK G ++ A E++ +M   DG   + + Y++++
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
               ++G  +  R +   M R G  P +VTY+ L++     G++E A     EM ++G +
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL-----PNKYTYTILINENCNAGNWQ 680
           PN +TY +L++GLC   R+ +A  +  +M   G       P+  TY  LI   C AG   
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRID 420

Query: 681 EALRLYKEMLDREIEPDYCTHSALL 705
           +AL+ ++ M  +  +PD  ++S ++
Sbjct: 421 DALKFFQRMRSQGCDPDGVSYSTIV 445



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 194/398 (48%), Gaps = 7/398 (1%)

Query: 158 ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
           + D++  GG S+   +     LL  Y K   VE+   +  +++  GL PD     +++  
Sbjct: 68  VRDMISRGGRST-PDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVAS 126

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
           L  +    +A E+   M   G  P+++T+NT++   C+E  ++ A  LL +M   G   +
Sbjct: 127 LCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKAD 186

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
            VTYN L+ G  + G L++A  L+  M   G      +Y+  + G  + G +++A  + E
Sbjct: 187 VVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLE 246

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP-DIISYNTLLYGYCRS 396
           +M      P + TYN ++ GLCK G++  A     +M   +    +++ Y+T++ G C+ 
Sbjct: 247 QMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKL 306

Query: 397 GNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
           G   EA  + + +      P VVTY++L++GLC+ G +E A +    M  +G  P+ +TY
Sbjct: 307 GRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTY 366

Query: 457 TIMVNGSCKMGNLSMAREFFNEM-----LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
             +V+G C  G L+ A     EM           P    Y   I G  K G   +A +  
Sbjct: 367 CSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFF 426

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
           + M ++G  PD ++Y+ +V GL + G   +A  +L ++
Sbjct: 427 QRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEV 464



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 121/248 (48%), Gaps = 2/248 (0%)

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M R G  P+   +   + G  K G   +  RL E M A+   P++++YN L+ GLCKL  
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 539 LEEANELLRKMVGDG--FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
             EA EL+R M+  G    PD +TY++++    + G +   R+L   ++ +GL P  + Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
           T ++ +     RL  A     EM   G  P +IT+N LI+G CR + ++ A  L   M  
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVH 716
            G+  +  TY  L++  C AG  QEA +L + M      PD   +S+ +         + 
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 717 AVEYLESL 724
           A + LE +
Sbjct: 241 AHQVLEQM 248


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  258 bits (659), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 156/535 (29%), Positives = 275/535 (51%), Gaps = 16/535 (2%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK---------- 255
           P+V + N +I  L   G   KA  ++  M   G  P+IVTYN+++D  CK          
Sbjct: 137 PNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAV 196

Query: 256 ------EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
                 +G+++EA+ LL +M G G  P+ VTY++LI  + + G   +AR +   M++ G 
Sbjct: 197 LQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQ 256

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
              A++Y  ++ GY+ KG LV+  +L   M+  G+      +NILI    K   +  A  
Sbjct: 257 NPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMT 316

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
            F EM +K   P++++Y T++   C++G + +A   F ++ S  L P ++T+ +LI GLC
Sbjct: 317 AFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLC 376

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
             G+ +  ++L   MIN+GI P+ I    +++  CK G +  A +FF++++  G++PD  
Sbjct: 377 TIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVV 436

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
           +YT  I G    G   E+ +L   M++ G  PD +TY+ L++G CK G +++A  L R+M
Sbjct: 437 SYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREM 496

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRL 609
                 P+ ITY  I+H     G +   R+ +  ++  G+   + TY +++        +
Sbjct: 497 FSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFV 556

Query: 610 ELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL 669
           + A   F  ++ K  +  V T+N +I GL ++ RI  A  LF  +   G++P+   Y ++
Sbjct: 557 DEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLM 616

Query: 670 INENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           I  +   G  +E+  L+  M       +  T +A++ K L+K     A  YL  +
Sbjct: 617 IQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKI 671



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 143/522 (27%), Positives = 257/522 (49%), Gaps = 56/522 (10%)

Query: 227 AREVYRMMGEFGIK--PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVL 284
           +R    MM + G    P++++YN +++   KEGE+ +A  L  EM G+G  PN VTYN +
Sbjct: 121 SRAAVHMMADDGYNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSV 180

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           I G  +   +++A  +++ M                    +KG L EA+ L ++M   G+
Sbjct: 181 IDGLCKAQAMDKAEAVLQQMF-------------------DKGQLEEAVRLLKKMSGGGL 221

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG------- 397
            P + TY++LI   CK GR ++AR+ F  M+R+   PD  +Y TLL+GY   G       
Sbjct: 222 QPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHD 281

Query: 398 ----------------------------NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
                                        + +A   F E+R +   P VVTY T+ID LC
Sbjct: 282 LLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILC 341

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
           + G +E A      M+++G+ PD+IT+T +++G C +G      +   EM+ +G+ P+  
Sbjct: 342 KAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAI 401

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
              T +    K G   EA+   ++++  G  PD+++Y +L+ G C  G ++E+ +LL +M
Sbjct: 402 FLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRM 461

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRL 609
           V  G  PD++TY+++++   + G +     L+  M  K + P  +TY +++H     GR+
Sbjct: 462 VSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRV 521

Query: 610 ELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL 669
             A  ++ ++   GI+  + TYN ++ GLC    +D+A  +F  +  +       T+ I+
Sbjct: 522 VAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIM 581

Query: 670 INENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDK 711
           I      G   +A  L+  +L   + PD   +  ++   +++
Sbjct: 582 IVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEE 623



 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 144/514 (28%), Positives = 253/514 (49%), Gaps = 16/514 (3%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRII----------------KVLRDNGFSVKAR 228
           K+  V++   +F++ML  G  P++   N +I                + + D G   +A 
Sbjct: 151 KEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAV 210

Query: 229 EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
            + + M   G++P +VTY+ ++D +CK G   EA  +   M  RG +P+  TY  L+ G+
Sbjct: 211 RLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGY 270

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
           +  G L     L+  M++ G+ +  H +N +I  Y++   L +A+    EM  +G +P +
Sbjct: 271 ATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNV 330

Query: 349 ATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDE 408
            TY  +I  LCK GRV DA   F +M+ + + PDII++ +L++G C  G   +   L  E
Sbjct: 331 VTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFE 390

Query: 409 LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
           + +R + P  +  NT++D LC+ G +  A    + +I+ G+ PDV++YTI+++G C  G 
Sbjct: 391 MINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGK 450

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
           +  + +    M+  GL+PD   Y+  + G  K G   +A  L  EM +K   P+ ITYN+
Sbjct: 451 MDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNI 510

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           ++HGL   G +  A E   K+V  G      TY  ++    E   +     +F  +  K 
Sbjct: 511 ILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKE 570

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
               + T+ ++I      GR+  A   FS +   G+ P+ I Y  +I        ++++ 
Sbjct: 571 FQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESD 630

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
            LF+ ME+ G   N  T   ++ +    G+ + A
Sbjct: 631 ELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRA 664



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 137/483 (28%), Positives = 230/483 (47%), Gaps = 71/483 (14%)

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPII-------CGYSEKGLLVEALNLEEEMVTRGV-- 344
           LE A  L  ++L      S H++N ++          S++     A++L   M   GV  
Sbjct: 30  LEDALNLFDELLPRARSASVHAFNRVLTVVAHGDSSSSQRHGAALAVSLFNTMAQVGVNK 89

Query: 345 -APTLATYNILIYGLCKWG----------RVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
            A    T+ ILI   C  G          R S A          N  P+++SYN ++ G 
Sbjct: 90  LATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYNCPPNVLSYNMVINGL 149

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY----------------GDLEVA 437
            + G + +A+ LF E+  +   P +VTYN++IDGLC+                 G LE A
Sbjct: 150 FKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEA 209

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
            +L + M   G+ PDV+TY+++++  CK+G  + AR  F+ M+R+G  PD + Y T + G
Sbjct: 210 VRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHG 269

Query: 498 ELKLGDTSE-------------------------AYRLQE----------EMLAKGFPPD 522
               G   +                         AY   E          EM  KGF P+
Sbjct: 270 YATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPN 329

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
           ++TY  ++  LCK G +E+A     +MV +G  PD IT+TS+IH    +G+ ++   L  
Sbjct: 330 VVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSF 389

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
            M+ +G+ P  +    ++ +    GR+  A  +F ++   G++P+V++Y  LI+G C   
Sbjct: 390 EMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDG 449

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
           ++D++  L   M   G+ P+  TY+ L+N  C  G   +AL LY+EM  ++++P+  T++
Sbjct: 450 KMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYN 509

Query: 703 ALL 705
            +L
Sbjct: 510 IIL 512


>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 989

 Score =  258 bits (659), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 176/586 (30%), Positives = 294/586 (50%), Gaps = 41/586 (6%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  Y K   VE+   ++ KM+ NG++PDV  C+ I+     +G   +A  ++R M E G
Sbjct: 327 LIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMG 386

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           + P+ V+Y T+++S  K G + EA  L  +M  RG S + VT   ++ G  + G+ ++A 
Sbjct: 387 LDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAE 446

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            +   +LKL L  +  +Y+ ++ GY + G +  A  + ++M    V P + T++ +I G 
Sbjct: 447 EVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGY 506

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
            K G +S A     EM+++NV+P+ I Y  L+ GY ++G    A     E++SR L  + 
Sbjct: 507 AKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESN 566

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           V ++ L++ L R G ++ A+ L  +M ++GI PD++ Y  +++G  K GN   A     E
Sbjct: 567 VIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQE 626

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M  K ++ D  AY   I G L+LG     Y +   M+  G  PD ITYN +++  C  G 
Sbjct: 627 MKEKNIRFDVVAYNALIKGLLRLGKYDPRY-VCSRMIELGLAPDCITYNTIINTYCIKGK 685

Query: 539 LEEANELLRKMVGDGFIPDHITY--------------TSIIHASL-------EMGD---- 573
            E+A ++L +M   G +P+ +TY              T I H  L       E  D    
Sbjct: 686 TEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPITHKFLVKAYSRSEKADKILQ 745

Query: 574 -----------LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
                      L+R + + + M+++G+S  LVTY  LI  +     +E A   +S+M V 
Sbjct: 746 IHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVD 805

Query: 623 GIRPNVITYNALINGLCR----LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGN 678
           GI PN+ TYN L+ GL         +++   L  +M E G++PN  TY IL++     GN
Sbjct: 806 GIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGN 865

Query: 679 WQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
            ++ + L+ EM+ +   P   T++ L+         + A E L  L
Sbjct: 866 RKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDL 911



 Score =  258 bits (659), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 167/564 (29%), Positives = 277/564 (49%), Gaps = 56/564 (9%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
           F+ M   GL+P +   N ++     +G   + + +Y  M   G+ P + + N ++ S CK
Sbjct: 82  FSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCK 141

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
            G++  AL  L          + VTYN +I GF + G ++Q  GL+ +M+K GL   + +
Sbjct: 142 VGDLDLALGYL--RNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSIT 199

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
            N ++ GY   GL+  A  +   +V  GV   +   N LI G C+   +S A        
Sbjct: 200 CNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAVLMSQATELIENSW 259

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS-------------------RNLVP 416
           R +V  DI++YNTLL  +C++G++  A  LF+E+                     +NL P
Sbjct: 260 RSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQP 319

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
           T+VTY TLI   C++  +E +  L + MI  GI+PDV+T + ++ G C+ G L+ A   F
Sbjct: 320 TLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLF 379

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG------------------ 518
            EM   GL P+  +Y T I    K G   EA+ LQ +M+ +G                  
Sbjct: 380 REMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKV 439

Query: 519 -----------------FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
                              P+ +TY+ L+ G CKLG +E A  +L+KM  +   P+ IT+
Sbjct: 440 GKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITF 499

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
           +SII+   + G L +  D+   M+++ + P  + Y +LI  +   G  ++A  +  EM+ 
Sbjct: 500 SSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKS 559

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
           + +  + + ++ L+N L R+ R+D+A  L IDM  +GI P+   Y  LI+     GN   
Sbjct: 560 RRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLA 619

Query: 682 ALRLYKEMLDREIEPDYCTHSALL 705
           AL + +EM ++ I  D   ++AL+
Sbjct: 620 ALSIVQEMKEKNIRFDVVAYNALI 643



 Score =  239 bits (609), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 166/623 (26%), Positives = 303/623 (48%), Gaps = 70/623 (11%)

Query: 138 GLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFN 197
           GL++ A WV        M+ ++D    GG++    +  L+ L+  Y +  ++ Q   +  
Sbjct: 211 GLVQYAEWV--------MYNLVD----GGVTK--DVIGLNTLIDGYCEAVLMSQATELIE 256

Query: 198 KMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF-------------------G 238
              R+ +  D+   N ++K     G   +A  ++  +  F                    
Sbjct: 257 NSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKN 316

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           ++P++VTY T++ ++CK   ++E+  L  +M   G  P+ VT + ++ GF R+G+L +A 
Sbjct: 317 LQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAA 376

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L R+M ++GL  +  SY  II    + G ++EA NL+ +MV RG++  + T   ++ GL
Sbjct: 377 VLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGL 436

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
            K G+  +A   F  +L+ N+ P+ ++Y+ LL GYC+ G +  A L+  ++   ++ P V
Sbjct: 437 FKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNV 496

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           +T++++I+G  + G L  A  +   M+ + ++P+ I Y I+++G  K G   +A +F  E
Sbjct: 497 ITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKE 556

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M  + L+     +   +    ++G   EA  L  +M +KG  PD++ Y  L+ G  K G+
Sbjct: 557 MKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGN 616

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
              A  ++++M       D + Y ++I   L +G     R + + M+  GL+P  +TY  
Sbjct: 617 QLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKY-DPRYVCSRMIELGLAPDCITYNT 675

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC------------------- 639
           +I+ +  +G+ E A    +EM+  GI PN +TYN LI GLC                   
Sbjct: 676 IINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPITHKFLVKAYS 735

Query: 640 RLRRIDQ---------AYGLFI--------DMEEEGILPNKYTYTILINENCNAGNWQEA 682
           R  + D+         A GL +        +M + GI  +  TY  LI   C   + ++A
Sbjct: 736 RSEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKA 795

Query: 683 LRLYKEMLDREIEPDYCTHSALL 705
           L+ Y +M    I P+  T++ LL
Sbjct: 796 LKTYSQMFVDGIAPNITTYNTLL 818



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 158/574 (27%), Positives = 263/574 (45%), Gaps = 64/574 (11%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G+  D     T+++ L + G  + A  V ET++ +N+             +CV+      
Sbjct: 421 GISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLA-----------PNCVT---YSA 466

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL  Y K   +E   LV  KM +  + P+V   + II      G   KA +V R M +  
Sbjct: 467 LLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRN 526

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           + P+ + Y  ++D + K GE   A +   EM+ R    + V +++L+    R G +++AR
Sbjct: 527 VMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEAR 586

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            LI DM   G+     +Y  +I GY ++G  + AL++ +EM  + +   +  YN LI GL
Sbjct: 587 SLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGL 646

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
            + G+  D R+    M+   + PD I+YNT++  YC  G   +A  + +E++S  ++P  
Sbjct: 647 LRLGKY-DPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNA 705

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK------------- 465
           VTYN LI GLC+                 G +P  IT+  +V    +             
Sbjct: 706 VTYNILIGGLCK----------------TGFVPTPITHKFLVKAYSRSEKADKILQIHEK 749

Query: 466 --MGNLSMARE--FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
                L + R+    +EM+++G+  D   Y   I G        +A +   +M   G  P
Sbjct: 750 LVASGLELKRQKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAP 809

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGD----GFIPDHITYTSIIHASLEMGDLRRG 577
           ++ TYN L+ GL   G +EE  E   K+V +    G +P+  TY  ++     +G+ ++ 
Sbjct: 810 NITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKT 869

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
             L   M+ KG  PTL TY VLI  +A  G++  A    +++  KG  PN  TY+ L  G
Sbjct: 870 IILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCG 929

Query: 638 LCRL-------RRIDQAY-----GLFIDMEEEGI 659
              L       R + ++Y      L I+M  +G+
Sbjct: 930 WLNLSYEPEIDRSLKRSYEIEVKKLLIEMGRKGL 963



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 130/481 (27%), Positives = 225/481 (46%), Gaps = 60/481 (12%)

Query: 281 YNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV 340
           +  LI  +  +     A      M  LGL  +   +N ++  ++  GL+ +   +  +M+
Sbjct: 62  FCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDML 121

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI--ISYNTLLYGYCRSGN 398
             GV P + + N+L++ LCK G +  A       LR N + DI  ++YNT+++G+C+ G 
Sbjct: 122 FCGVVPDVFSVNVLVHSLCKVGDLDLA----LGYLRNNDVVDIDNVTYNTVIWGFCQKGL 177

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           + + F L  E+  R L    +T N L+ G CR G ++ A+ +  N+++ G+  DVI    
Sbjct: 178 VDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNT 237

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA-- 516
           +++G C+   +S A E      R  ++ D   Y T +    K GD + A  L  E+L   
Sbjct: 238 LIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFW 297

Query: 517 -----------------KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
                            K   P L+TY  L+   CK   +EE++ L +KM+ +G +PD +
Sbjct: 298 KDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVV 357

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
           T +SI++     G L     LF  M   GL P  V+Y  +I++    GR+  AF   S+M
Sbjct: 358 TCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQM 417

Query: 620 QVKGIR-----------------------------------PNVITYNALINGLCRLRRI 644
            V+GI                                    PN +TY+AL++G C+L ++
Sbjct: 418 VVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKM 477

Query: 645 DQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
           + A  +   ME+E + PN  T++ +IN     G   +A+ + +EM+ R + P+   ++ L
Sbjct: 478 ELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAIL 537

Query: 705 L 705
           +
Sbjct: 538 I 538


>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Brachypodium distachyon]
          Length = 877

 Score =  258 bits (659), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 145/439 (33%), Positives = 230/439 (52%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G  P+ V YN ++D +C+ G++   + LL EM+ +G  P  VTY  L++   R G+LE+ 
Sbjct: 289 GCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKI 348

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L+ +M +  L  +   YN +I    +     +AL + ++M   G  P   T++ LI G
Sbjct: 349 ASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISG 408

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           LC+ GRV +A     E  R  + P++ SY +L++G+C  G +  A  L  E+  R   P 
Sbjct: 409 LCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPD 468

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           VVT+  LI GL   G +  A  ++E M  + +LPD   Y ++++G CK   L  AR    
Sbjct: 469 VVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIE 528

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           EML + + PD++ YTT I G ++     EA ++ E M  KG  PD++ YN ++ G C+ G
Sbjct: 529 EMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFG 588

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            + EA E +  M   G IPD  TYT++I    + G++     L  +M+++   P +V Y+
Sbjct: 589 MMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYS 648

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
            LI+ +   G  + A   F  M+ +G+ PNVITY  LI  L +  ++ +A   F  M   
Sbjct: 649 SLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLN 708

Query: 658 GILPNKYTYTILINENCNA 676
              PN YT   L+   CN+
Sbjct: 709 QCSPNDYTLHSLVTGLCNS 727



 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 179/597 (29%), Positives = 285/597 (47%), Gaps = 47/597 (7%)

Query: 123 DEFVFCTI-----LEILIESGL-LRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKIL 176
           D++  C +     LE L+E GL L  A W      CV      +VLI G           
Sbjct: 258 DDYSTCVMVRGLCLEGLVEKGLKLIEARW---GAGCVPNAVFYNVLIDG----------- 303

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
                 Y ++  V + +L+  +M   GLLP V     ++  L   G   K   +   M E
Sbjct: 304 ------YCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRE 357

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
             + P++  YN+++D+ CK     +AL +L +M   GC P+ +T++ LI+G  + G +++
Sbjct: 358 RRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQE 417

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  L+R+  +  L  +  SY  +I G+  +G ++ A NL  EM+ RG  P + T+  LI+
Sbjct: 418 AERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIH 477

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           GL   G+VS+A     +M  + ++PD   YN L+ G C+   +  A  L +E+  +N+ P
Sbjct: 478 GLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHP 537

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
               Y TLIDG  R   L+ A+++ E M  +GI PDV+ Y  M+ G C+ G ++ A E  
Sbjct: 538 DKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECM 597

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           + M + G  PD F YTT I G  K G+ S A  L  +M+ +   P+++ Y+ L++G CKL
Sbjct: 598 STMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKL 657

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP----- 591
           G  + A  L   M   G  P+ ITYT +I +  +   + R    F  ML    SP     
Sbjct: 658 GDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTL 717

Query: 592 -TLVT-----YTVLIHAHAA-----RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
            +LVT        +I +H +      G+  L    F  +      P    YNA+I  LC 
Sbjct: 718 HSLVTGLCNSMASIISSHCSSTVNLHGKGAL-LDIFRALVNDRCDPRNSAYNAIIFSLCI 776

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
              + +A  L   M  +G  P+  T+  L+   C+ G  +E    ++ +L  E + D
Sbjct: 777 HNMLGEALDLKNKMANKGYKPDSATFLSLLYGFCSVGKSRE----WRTILPNEFQRD 829



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 144/514 (28%), Positives = 236/514 (45%), Gaps = 1/514 (0%)

Query: 214 IIKVLRDNGFSVKAREV-YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR 272
           ++    D G   KA E+  R     G  P     N +L    +     +A +L  EM   
Sbjct: 194 LVATYADAGMEAKAAEMCQRAREHHGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAE 253

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA 332
               +  +  V++ G    G +E+   LI      G   +A  YN +I GY  +G +   
Sbjct: 254 ESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRG 313

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
           + L  EM  +G+ PT+ TY  L+  L + G +        EM  + + P++  YN+++  
Sbjct: 314 ILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDA 373

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
            C+  +  +A ++  ++ +    P  +T++TLI GLC+ G ++ A++L        + P+
Sbjct: 374 LCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPN 433

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
           + +YT +++G C  G + +A     EM+ +G  PD   +   I G +  G  SEA  ++E
Sbjct: 434 LSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVRE 493

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           +M A+   PD   YNVL+ GLCK   L  A  L+ +M+     PD   YT++I   +   
Sbjct: 494 KMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNE 553

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
            L   R +F  M +KG+ P +V Y  +I  +   G +  A    S M+  G  P+  TY 
Sbjct: 554 SLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYT 613

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
            LI G  +   I  A  L  DM +    PN   Y+ LIN  C  G+   A  L+  M  +
Sbjct: 614 TLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQ 673

Query: 693 EIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
            + P+  T++ L+     KD  V A  Y E + L
Sbjct: 674 GLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLL 707


>gi|242039913|ref|XP_002467351.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
 gi|241921205|gb|EER94349.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
          Length = 846

 Score =  258 bits (659), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 161/562 (28%), Positives = 260/562 (46%), Gaps = 73/562 (12%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           VF +M   G  P +   N +I      G    A  +  +MGEFGI P++ +YN ++   C
Sbjct: 206 VFEEMAARGPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHC 265

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
             G  ++A +L  EM   GC P  VTYN+L+      G + +AR L  +M ++G++ +  
Sbjct: 266 VFGWSRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTI 325

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRF--- 371
           ++N +I GY++ G + +A     EM  RG+ P   T+NI+  G  K+G  +   H     
Sbjct: 326 TFNVLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQLVHDHDMF 385

Query: 372 -------------------------FEMLRKNV---IP-DIISYNTLLYGYCRSGNIGEA 402
                                    +E+LR  +    P  +  +N L+  Y + G   EA
Sbjct: 386 GSHMLADGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNALIAAYSKEGLHEEA 445

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG-------------- 448
           F L+  +    L P+  T+N LI GLC  G L+ AQ L E+M+++G              
Sbjct: 446 FELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTSFTICLDAS 505

Query: 449 --------------------ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
                               + PD I ++  +NG C++  ++ A + F EM  +G+ P+ 
Sbjct: 506 FREGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNN 565

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
           F Y + I+   + G+ +EA +LQ+ M   G  PD+ T N+L+ GLC+ G LE  + LL  
Sbjct: 566 FTYNSIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNILIDGLCREGKLEMVDNLLLD 625

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M  +G  PD +TY +II+A     D+    +  N ML  G  P + TY + +H+  +   
Sbjct: 626 MCSNGLTPDTVTYNTIINAYCRAKDMNSAMNFMNKMLAAGCEPDIFTYNIWMHSLCSNHM 685

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           L  A     E+   G  P+ +TYN L++G+C    +D+A  L   + +    PN  T  +
Sbjct: 686 LNQAGKVLDELVAMGCPPDSVTYNTLMDGICS-DVLDRAMILTGRLIKMAFQPNTITLNV 744

Query: 669 LINENCNAG------NWQEALR 684
            ++  C  G       W E LR
Sbjct: 745 FLSHFCKQGFGKRALMWAEKLR 766



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 147/485 (30%), Positives = 238/485 (49%), Gaps = 6/485 (1%)

Query: 222 GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY 281
           G + +A +V   +   G  PS+     +L    + GE+  A  +  EM  RG  P+  T+
Sbjct: 163 GMAAEALDVLTRVRRSGKTPSLSALAALLRLLFRSGEVHAAWNVFEEMAARGPRPSLATF 222

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
           N +I GF   G +  A GL+  M + G+  +  SYN +I G+   G   +A  L EEM  
Sbjct: 223 NAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHCVFGWSRDAFKLFEEMHR 282

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
            G  PT+ TYNIL+  LC  GR+ +AR  F EM +  +  + I++N L+ GY ++G + +
Sbjct: 283 SGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTITFNVLIDGYAKTGRMDQ 342

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE-NMINQGILPDVITYTIMV 460
           A   + E+++R LVP   T+N +  G  ++G    AQ + + +M    +L D +   ++V
Sbjct: 343 ACAAYREMKARGLVPDSCTFNIIAAGAYKFG--HAAQLVHDHDMFGSHMLADGM--DMLV 398

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
              C    L  A E     + +G       +   IA   K G   EA+ L   M   G  
Sbjct: 399 CRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNALIAAYSKEGLHEEAFELYRIMNKLGLA 458

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           P   T+N L+ GLC  G L+EA  LL  MV  G+     ++T  + AS   G+       
Sbjct: 459 PSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLS-TSFTICLDASFREGNAVCALKC 517

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
           +++M + GL P  + ++  I+       +  A+  F+EM  +GI PN  TYN++I+ LCR
Sbjct: 518 WDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNNFTYNSIISALCR 577

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
              + +A  L  +M + G++P+ YT  ILI+  C  G  +    L  +M    + PD  T
Sbjct: 578 AGNMTEALKLQQNMRQNGLVPDIYTSNILIDGLCREGKLEMVDNLLLDMCSNGLTPDTVT 637

Query: 701 HSALL 705
           ++ ++
Sbjct: 638 YNTII 642



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 146/476 (30%), Positives = 235/476 (49%), Gaps = 13/476 (2%)

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           L +F   G   EAL++L  ++  G +P+      L+    R+GE+  A  +  +M   G 
Sbjct: 156 LHAFLAAGMAAEALDVLTRVRRSGKTPSLSALAALLRLLFRSGEVHAAWNVFEEMAARGP 215

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
           + S  ++N +I G+  +GL+  A  L   M   G+ P + +YNILI G C +G   DA  
Sbjct: 216 RPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHCVFGWSRDAFK 275

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
            F EM R    P +++YN L+   C  G + EA  LFDE+    +    +T+N LIDG  
Sbjct: 276 LFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTITFNVLIDGYA 335

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE----FFNEMLRKGLQ 485
           + G ++ A      M  +G++PD  T+ I+  G+ K G+ +        F + ML  G+ 
Sbjct: 336 KTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQLVHDHDMFGSHMLADGMD 395

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
                   ++  + +L D   A+ L    + +G P  +  +N L+    K G  EEA EL
Sbjct: 396 ----MLVCRLCWDCRLDD---AWELLRGAIEQGAPLSVTGFNALIAAYSKEGLHEEAFEL 448

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
            R M   G  P   T+  +I      G L   + L  +M+ KG   +  ++T+ + A   
Sbjct: 449 YRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLS-TSFTICLDASFR 507

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
            G    A   + +M   G++P+ I ++A INGLCRL  +++AY  F +M   GI+PN +T
Sbjct: 508 EGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNNFT 567

Query: 666 YTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYL 721
           Y  +I+  C AGN  EAL+L + M    + PD  T S +L+  L ++ K+  V+ L
Sbjct: 568 YNSIISALCRAGNMTEALKLQQNMRQNGLVPDIYT-SNILIDGLCREGKLEMVDNL 622



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 126/464 (27%), Positives = 202/464 (43%), Gaps = 67/464 (14%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
            ++L+  Y K   ++Q    + +M   GL+PD    N I       G + +    + M G
Sbjct: 327 FNVLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQLVHDHDMFG 386

Query: 236 --------------------------------EFGIKPSIVTYNTMLDSFCKEGEMQEAL 263
                                           E G   S+  +N ++ ++ KEG  +EA 
Sbjct: 387 SHMLADGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNALIAAYSKEGLHEEAF 446

Query: 264 ELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGY 323
           EL   M   G +P+  T+N LI G    G L++A+ L+  M+  G  +S  S+   +   
Sbjct: 447 ELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLST-SFTICLDAS 505

Query: 324 SEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
             +G  V AL   ++M   G+ P    ++  I GLC+   V++A   F EM  + ++P+ 
Sbjct: 506 FREGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNN 565

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
            +YN+++   CR+GN+ EA  L   +R   LVP + T N LIDGLCR G LE+   L  +
Sbjct: 566 FTYNSIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNILIDGLCREGKLEMVDNLLLD 625

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           M + G+ PD +TY  ++N  C+  +++ A  F N+ML  G +PD F Y   +        
Sbjct: 626 MCSNGLTPDTVTYNTIINAYCRAKDMNSAMNFMNKMLAAGCEPDIFTYNIWMHSLCSNHM 685

Query: 504 TSEAYRLQEEMLAKGFPPD----------------------------------LITYNVL 529
            ++A ++ +E++A G PPD                                   IT NV 
Sbjct: 686 LNQAGKVLDELVAMGCPPDSVTYNTLMDGICSDVLDRAMILTGRLIKMAFQPNTITLNVF 745

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           +   CK G  + A     K+  D F+ D  T   I  A  E+ D
Sbjct: 746 LSHFCKQGFGKRALMWAEKLREDSFVFDDATRNIIDWARRELED 789



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 186/408 (45%), Gaps = 12/408 (2%)

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
            +   G+  EAL++   +   G  P+L+    L+  L + G V  A + F EM  +   P
Sbjct: 158 AFLAAGMAAEALDVLTRVRRSGKTPSLSALAALLRLLFRSGEVHAAWNVFEEMAARGPRP 217

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
            + ++N ++ G+C  G +  A  L   +    +VP V +YN LI G C +G    A +L 
Sbjct: 218 SLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHCVFGWSRDAFKLF 277

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
           E M   G  P V+TY I+V+  C  G +  AR  F+EM + G+Q +   +   I G  K 
Sbjct: 278 EEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTITFNVLIDGYAKT 337

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS----LEEANELLRKMVGDGFIPD 557
           G   +A     EM A+G  PD  T+N++  G  K G     + + +     M+ DG   D
Sbjct: 338 GRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQLVHDHDMFGSHMLADGM--D 395

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
            +         L+        +L    + +G   ++  +  LI A++  G  E AF  + 
Sbjct: 396 MLVCRLCWDCRLD-----DAWELLRGAIEQGAPLSVTGFNALIAAYSKEGLHEEAFELYR 450

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
            M   G+ P+  T+N LI GLC   R+D+A  L   M  +G   +  ++TI ++ +   G
Sbjct: 451 IMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLST-SFTICLDASFREG 509

Query: 678 NWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
           N   AL+ + +M    ++PD+   SA +      DY   A +    +T
Sbjct: 510 NAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMT 557


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  258 bits (659), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 156/505 (30%), Positives = 250/505 (49%), Gaps = 18/505 (3%)

Query: 194 LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
           L+ +++   GL PD    N I+  L D   +  A  ++  M E G       YN ++   
Sbjct: 32  LLLDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELGAVNHTTYYN-LIHPL 90

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           CK   + EA+ LL +M+ RG +P  + +NV+I G  R G L  A G+ R M        A
Sbjct: 91  CKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQM------NDA 144

Query: 314 H-----SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           H     +Y  ++ G S+ G L +A+ + +EMV+    P   T  +++  LC   RV DAR
Sbjct: 145 HPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDAR 204

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF-LLFDELRSRNLVPTVVTYNTLIDG 427
               EML + +  + I+Y+ L+ G C+   + EA  LL  E+  R   P +VTY+T+IDG
Sbjct: 205 ELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDG 264

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           LC+ G L  A  + E M      P  ITY  ++ G C+ G++  A     +M+     PD
Sbjct: 265 LCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPD 321

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              YTT ++   K+G   +AY L ++M+A    PD++T+  LV GLC  G +E+A ELL 
Sbjct: 322 VITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLE 381

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
           ++   G  P   TY  ++    +   +R+  +L  +   +G  P  VTY +L+      G
Sbjct: 382 EITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAG 441

Query: 608 RLELAFMYFSEMQVKG--IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
           R + A  Y  ++  +G     +V  Y  +++ LCR  R D A   + +M + G +P   T
Sbjct: 442 RTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAAT 501

Query: 666 YTILINENCNAGNWQEALRLYKEML 690
           +  ++   C A   Q+A  L +EM+
Sbjct: 502 FATVVFALCKAHQPQQAHELLEEMI 526



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 155/466 (33%), Positives = 244/466 (52%), Gaps = 14/466 (3%)

Query: 265 LLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYS 324
           LL E++ RG SP+ V  N ++       +   A  L   M +LG  V+  +Y  +I    
Sbjct: 33  LLDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELG-AVNHTTYYNLIHPLC 91

Query: 325 EKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDII 384
           +  LL EA+ L  +M +RG+ P    +N++I GLC+ GR+  A   + +M   +  PD +
Sbjct: 92  KARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHP-PDFL 150

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
           +Y  L++G  ++G + +A  +  E+ S   VP   T   ++  LC    ++ A++L E M
Sbjct: 151 TYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEM 210

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFF-NEMLRKGLQPDRFAYTTQIAGELKLGD 503
           +++G+  + ITY+ +V+G CK   L  A      E+ R+G  PD   Y+T I G  K G 
Sbjct: 211 LHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGR 270

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
             +A  + EEM      P  ITYN L+ G C+ G ++EA  LL KMV D   PD ITYT+
Sbjct: 271 LRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTT 327

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           ++ A  +MG L    +LF  M+   LSP +VT+T L+      GR+E A     E+  +G
Sbjct: 328 LMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRG 387

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
             P + TYN +++G C+  ++ +A  L  D    G +PN  TY IL+   C AG   +AL
Sbjct: 388 CPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQAL 447

Query: 684 RLYKEMLDREIEPDYCTHS----ALLLKQLDKDYKV-HAVEYLESL 724
           + Y + L+ E  P  C  S    A++L  L +D +   AV++ E +
Sbjct: 448 Q-YLDQLNSEGGP--CPTSVAMYAIILDALCRDGRTDDAVQFYEEM 490



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 147/490 (30%), Positives = 233/490 (47%), Gaps = 8/490 (1%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G+ P  V  NT+L   C   +   A+ L  +M   G + N  TY  LI    +   L++A
Sbjct: 41  GLSPDPVELNTILAELCDARDTTTAMALFDKMAELG-AVNHTTYYNLIHPLCKARLLDEA 99

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
            GL+ DM   G+      +N +I G    G L  AL +  +M      P   TY  L++G
Sbjct: 100 MGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHG 158

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           L K GR+ DA     EM+    +PD  +   ++   C    + +A  L +E+  R +   
Sbjct: 159 LSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAAN 218

Query: 418 VVTYNTLIDGLCRYGDL-EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
            +TY+ L+DGLC+   L E    L   +  +G  PD++TY+ +++G CK G L  A + F
Sbjct: 219 AITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIF 278

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
            EM      P    Y + I G  + GD  EA RL  +M+     PD+ITY  L+   CK+
Sbjct: 279 EEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKM 335

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G L++A EL ++MV +   PD +T+TS++      G +    +L   + R+G  PT+ TY
Sbjct: 336 GRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTY 395

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
             ++  +    ++  A    ++ + +G  PN +TYN L+ G CR  R DQA      +  
Sbjct: 396 NCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNS 455

Query: 657 EG-ILPNKYT-YTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYK 714
           EG   P     Y I+++  C  G   +A++ Y+EM+ R   P   T + ++         
Sbjct: 456 EGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQP 515

Query: 715 VHAVEYLESL 724
             A E LE +
Sbjct: 516 QQAHELLEEM 525



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 146/507 (28%), Positives = 244/507 (48%), Gaps = 40/507 (7%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K  ++++ + +   M   G+ P     N +I  L   G    A  VYR M +    P  +
Sbjct: 92  KARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMND-AHPPDFL 150

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY  ++    K G +++A+++L EM      P+  T  V++        ++ AR L+ +M
Sbjct: 151 TYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEM 210

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLE-EEMVTRGVAPTLATYNILIYGLCKWGR 363
           L  G+  +A +Y+ ++ G  +   L EA+ L   E+  RG  P + TY+ +I GLCK GR
Sbjct: 211 LHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGR 270

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           + DA   F EM   +  P  I+YN+L+ GYCR+G++ EA  L  ++   N  P V+TY T
Sbjct: 271 LRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTT 327

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           L+   C+ G L+ A +L + M+   + PDV+T+T +V+G C  G +  A E   E+ R+G
Sbjct: 328 LMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRG 387

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
             P  + Y   + G  K     +A  L  +  ++GF P+ +TYN+LV G C+ G  ++A 
Sbjct: 388 CPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQAL 447

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT-YTVLIHA 602
           + L ++  +G                                  G  PT V  Y +++ A
Sbjct: 448 QYLDQLNSEG----------------------------------GPCPTSVAMYAIILDA 473

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
               GR + A  ++ EM  +G  P   T+  ++  LC+  +  QA+ L  +M + G  P 
Sbjct: 474 LCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPG 533

Query: 663 KYTYTILINENCNAGNWQEALRLYKEM 689
             T   +++  C AG  Q+A  L  E+
Sbjct: 534 PGTCDAVVSAYCRAGMIQKADELASEL 560



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 208/404 (51%), Gaps = 6/404 (1%)

Query: 184 TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
           +K   +   + V  +M+    +PD      +++ L        ARE+   M   G+  + 
Sbjct: 160 SKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANA 219

Query: 244 VTYNTMLDSFCKEGEMQEALELLW-EMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +TY+ ++D  CK   + EA+ LL  E+  RG +P+ VTY+ +I G  + G L  A  +  
Sbjct: 220 ITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFE 279

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M       +A +YN +I GY   G + EA+ L  +MV    AP + TY  L+   CK G
Sbjct: 280 EM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMG 336

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R+ DA   F +M+   + PD++++ +L+ G C  G + +A  L +E+  R   PT+ TYN
Sbjct: 337 RLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYN 396

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            ++DG C+   +  A++L  +  ++G +P+ +TY I+V G C+ G    A ++ +++  +
Sbjct: 397 CVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSE 456

Query: 483 GLQ-PDRFA-YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           G   P   A Y   +    + G T +A +  EEM+ +G+ P   T+  +V  LCK    +
Sbjct: 457 GGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQ 516

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM 584
           +A+ELL +M+  G  P   T  +++ A    G +++  +L + +
Sbjct: 517 QAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 560



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 130/454 (28%), Positives = 228/454 (50%), Gaps = 34/454 (7%)

Query: 105 RIALRFFRWV-ETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVC---VNMHGILD 160
           R AL  +R + +  P    D   +  ++  L ++G LR A  V++ +V    V  +  L 
Sbjct: 132 RHALGVYRQMNDAHP---PDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLT 188

Query: 161 VLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCL---LVFNKMLRNGLLPDVKNCNRIIKV 217
           V++    S C+  ++ D        + +VE+ L   +  N +  + L+  +  C R+   
Sbjct: 189 VVVQ---SLCLGDRVDD-------ARELVEEMLHRGMAANAITYSALVDGLCKCERL--- 235

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
             D   ++   EV R     G  P IVTY+T++D  CK G +++A+++  EM    C+P 
Sbjct: 236 --DEAVALLLGEVTRR----GFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CAPT 286

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
            +TYN LI G+ R G++++A  L+  M+         +Y  ++  + + G L +A  L +
Sbjct: 287 AITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQ 346

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
           +MV   ++P + T+  L+ GLC  GR+ DA     E+ R+   P I +YN ++ GYC+S 
Sbjct: 347 QMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSN 406

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG--ILPDVIT 455
            + +A  L  + RSR  VP  VTYN L+ G CR G  + A Q  + + ++G      V  
Sbjct: 407 QVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAM 466

Query: 456 YTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML 515
           Y I+++  C+ G    A +F+ EM+++G  P    + T +    K     +A+ L EEM+
Sbjct: 467 YAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMI 526

Query: 516 AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
             G  P   T + +V   C+ G +++A+EL  ++
Sbjct: 527 KYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 560



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 36/157 (22%)

Query: 584 MLRKGLSPTLVTYTVLIHA-HAARGRLELAFMYFSEMQVKGIRPNVI------------- 629
           ML  G      T+ V++   HA+     L  +   E++ +G+ P+ +             
Sbjct: 1   MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDAR 60

Query: 630 ---------------------TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
                                TY  LI+ LC+ R +D+A GL +DM+  G+ P    + +
Sbjct: 61  DTTTAMALFDKMAELGAVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNV 120

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +I   C AG  + AL +Y++M D    PD+ T++ L+
Sbjct: 121 VIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLV 156


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  258 bits (659), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 160/539 (29%), Positives = 272/539 (50%), Gaps = 37/539 (6%)

Query: 204 LLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEAL 263
           + P+++  N +++ L   G   +A  ++  +    + P  +TY+T++    K+  +  AL
Sbjct: 154 IAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHAL 213

Query: 264 ELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK-LGLKVSAHSYNPIICG 322
           +LL EM   G  P+ V YN L+ G  + GE E+   +   ++K  G + +  +YN ++ G
Sbjct: 214 DLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDG 273

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
             + G   E   + E MV   + P + TY ILI+GLC+ G V  A   + E+++  ++ D
Sbjct: 274 LCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVID 333

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDE--------LRSRNL-------------------- 414
              YN+L+ G+C++G + EA+  +D         LR+ N+                    
Sbjct: 334 AAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDL 393

Query: 415 -------VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG 467
                  +P  VT+ TLI GLC+ G    A  + E     G   DV +Y+ M+NG C +G
Sbjct: 394 LEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVG 453

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
            L  A + + +M + G +P+   Y   I+G  ++  TS+A R+  +M   G  P +ITYN
Sbjct: 454 RLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYN 513

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
            L+ GLCK    +EA+ + R+MV +GF PD  TY S+I        +     ++  +L K
Sbjct: 514 TLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYK 573

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEM-QVKGIRPNVITYNALINGLCRLRRIDQ 646
           GL   ++ + +LIH   + G+++ A   FS+M + K   PN++TYN L++GL     ID+
Sbjct: 574 GLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDK 633

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           A  L+  + E+G+ P+  +Y   I   C+     E ++L  E+L R I P   T + L+
Sbjct: 634 AATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILV 692



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 140/496 (28%), Positives = 240/496 (48%), Gaps = 41/496 (8%)

Query: 184 TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMGEFGIKPS 242
            K+  ++  L + ++M R+G+ PDV   N ++      G   K   V+ +++ + G +P+
Sbjct: 204 AKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPN 263

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           + TYN MLD  CK G  +E  E+   M      P+ +TY +LI G  R+G+++ A  +  
Sbjct: 264 LATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYS 323

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +++K GL + A  YN ++ G+ + G + EA    +     G+   L TYNI+I GL   G
Sbjct: 324 EIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSG 382

Query: 363 RVSDARHRFFEMLRKNV--IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            V +A    +++L K+V  IPD +++ TL++G C++G   +AF +F+E R       V +
Sbjct: 383 MVDEAIE-LWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFS 441

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y+++I+GLC  G L  A ++ E M   G  P+   Y  +++G C++   S A   +++M 
Sbjct: 442 YSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMA 501

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY-------------- 526
             G  P    Y T I G  K     EA  +  EM+  GF PD+ TY              
Sbjct: 502 DNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKID 561

Query: 527 ---------------------NVLVHGLCKLGSLEEANELLRKMV-GDGFIPDHITYTSI 564
                                N+L+HGLC  G ++EA  +   M       P+ +TY ++
Sbjct: 562 DALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTL 621

Query: 565 IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
           +    E G + +   L+ ++   GL P +++Y   I    +  R+        E+  +GI
Sbjct: 622 MDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGI 681

Query: 625 RPNVITYNALINGLCR 640
            P VIT+N L+  + +
Sbjct: 682 IPTVITWNILVRAVIK 697



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 133/475 (28%), Positives = 222/475 (46%), Gaps = 44/475 (9%)

Query: 283 VLITGFSRNGELEQARGLIRDMLK-LGLKVSAHSYNPIICGYSEKGLLVEA----LNLEE 337
           V+++ FSR    + A    R +   LG      S+N ++  +       +A     +L  
Sbjct: 88  VVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSH 147

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
               R +AP L TYNI++  LC  G +  A   F  + R+ V PD I+Y+TL+ G  +  
Sbjct: 148 GAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQD 207

Query: 398 NIGEAFLLFDELRSRNLVPTVV------------------------------------TY 421
            +  A  L DE+    + P VV                                    TY
Sbjct: 208 RLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATY 267

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           N ++DGLC++G  +   ++ E M+   + PDVITY I+++G C+ G++  A   ++E+++
Sbjct: 268 NVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIK 327

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
            GL  D   Y + + G  + G   EA++  +     G   +L TYN+++ GL   G ++E
Sbjct: 328 TGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGL-RNLRTYNIMIKGLFDSGMVDE 386

Query: 542 ANELLRKMVGD-GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           A EL   +  D   IPD +T+ ++IH   + G   +   +F      G    + +Y+ +I
Sbjct: 387 AIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMI 446

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
           +     GRL  A   + +M   G +PN   YNALI+G C++ R   A  ++  M + G  
Sbjct: 447 NGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCS 506

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKV 715
           P   TY  LI+  C A  +QEA  + +EM++    PD  T+ + L++ L  D K+
Sbjct: 507 PTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGS-LIRGLFSDKKI 560



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 208/420 (49%), Gaps = 5/420 (1%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V+ +M+ N L PDV     +I  L  +G    A  VY  + + G+      YN+++  FC
Sbjct: 286 VWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFC 345

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKV--S 312
           + G +QEA +  W+  G     N  TYN++I G   +G +++A  L  D+L+  +     
Sbjct: 346 QAGRVQEAWKF-WDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELW-DLLEKDVACIPD 403

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
             ++  +I G  + G   +A  + EE    G    + +Y+ +I GLC  GR+ DA   + 
Sbjct: 404 TVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYE 463

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
           +M +    P+   YN L+ G+C+     +A  ++ ++      PTV+TYNTLIDGLC+  
Sbjct: 464 KMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAE 523

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
             + A  +   M+  G  PD+ TY  ++ G      +  A   + ++L KGL+ D   + 
Sbjct: 524 KYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHN 583

Query: 493 TQIAGELKLGDTSEAYRLQEEML-AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
             I G    G   EA  +  +M   K  PP+L+TYN L+ GL + G +++A  L   +  
Sbjct: 584 ILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITE 643

Query: 552 DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLEL 611
           DG  PD I+Y + I        +  G  L + +L +G+ PT++T+ +L+ A    G +++
Sbjct: 644 DGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQV 703



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 157/288 (54%), Gaps = 1/288 (0%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           +     +   +F +   +G   DV + + +I  L + G  V A +VY  M + G KP+  
Sbjct: 416 QNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSH 475

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
            YN ++  FC+     +A+ +  +M   GCSP  +TYN LI G  +  + ++A  + R+M
Sbjct: 476 IYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREM 535

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           ++ G      +Y  +I G      + +AL++ ++++ +G+   +  +NILI+GLC  G+V
Sbjct: 536 VENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKV 595

Query: 365 SDARHRFFEML-RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
            +A H F +M  +KN  P++++YNTL+ G   +G I +A  L+  +    L P +++YNT
Sbjct: 596 DEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNT 655

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
            I GLC    +    QL + ++++GI+P VIT+ I+V    K G + +
Sbjct: 656 RIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQV 703


>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score =  258 bits (659), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 155/477 (32%), Positives = 242/477 (50%), Gaps = 1/477 (0%)

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           M+ +F + G+++EA+ ++ EMQ +G   +  T N ++      G +E A  +  +M + G
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           +     S+  ++      G ++EA      MV RG     AT  ++I   C+ G V+   
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F++M+   + P++I++  L+ G C+ G+I +AF L +E+  R   P V T+ TLIDGL
Sbjct: 280 GYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGL 339

Query: 429 CRYGDLEVAQQLKENMI-NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           C+ G  E A +L   ++ + G  P+V TYT M+NG CK   L+ A    + M  +GL P+
Sbjct: 340 CKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPN 399

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              YTT I G  K+G+   AY L + M  +GF P++ TYN ++ GLCK GSL+EA  LL 
Sbjct: 400 TNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLN 459

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
           K+   G   D +TYT ++       D  R    FN ML+ G +P + +YT LI     + 
Sbjct: 460 KVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQK 519

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
           +++ +   F E    G+ P   TY ++I G CR      A  LF  M   G  P+  TY 
Sbjct: 520 QMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYG 579

Query: 668 ILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
            LI+  C      +A  LY  M+D+ + P   T   L  +   KD    A+  L+ L
Sbjct: 580 ALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRL 636



 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 147/472 (31%), Positives = 232/472 (49%), Gaps = 4/472 (0%)

Query: 226 KAREVYRMMGEF---GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYN 282
           K +E   M+ E    G+  S  T N +LD     G ++ A  +  EM  RG SP+ V++ 
Sbjct: 169 KLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFK 228

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
           +++      G + +A   +  M++ G  V   +   II  + +KG +   +    +MV  
Sbjct: 229 LMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEM 288

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           G+AP +  +  LI GLCK G +  A     EM+R+   P++ ++ TL+ G C+ G   +A
Sbjct: 289 GLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKA 348

Query: 403 FLLFDEL-RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           F LF +L RS    P V TY  +I+G C+   L  A+ L   M  QG++P+  TYT +++
Sbjct: 349 FRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLID 408

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
           G CK+GN   A E  + M ++G  P+ + Y   I G  K G   EAYRL  ++   G   
Sbjct: 409 GHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQA 468

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           D +TY +L+   C+      +     KM+  GF PD  +YT++I        ++    LF
Sbjct: 469 DGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLF 528

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
              +  GL PT  TYT +I  +   G   LA   F  M   G  P+ ITY ALI+GLC+ 
Sbjct: 529 EEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKE 588

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
            ++D A  L+  M ++G+ P + T   L  E C   +   A+ +   +  R+
Sbjct: 589 SKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQ 640



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 142/502 (28%), Positives = 253/502 (50%), Gaps = 4/502 (0%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           S + L+ +L +     +VE    +F +M + G+ PD  +   ++    + G  ++A +  
Sbjct: 188 STQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWL 247

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M E G      T   ++D+FC++G +   +   W+M   G +PN + +  LI G  + 
Sbjct: 248 NAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQ 307

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV-TRGVAPTLAT 350
           G ++QA  L+ +M++ G K + +++  +I G  +KG   +A  L  ++V + G  P + T
Sbjct: 308 GSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHT 367

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           Y  +I G CK  +++ A      M  + ++P+  +Y TL+ G+C+ GN   A+ L D + 
Sbjct: 368 YTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMG 427

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
                P + TYN +IDGLC+ G L+ A +L   +   G+  D +TYTI+++  C+  + +
Sbjct: 428 KEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTN 487

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            +  FFN+ML+ G  PD  +YTT I+   +     E+ RL EE ++ G  P   TY  ++
Sbjct: 488 RSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMI 547

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
            G C+ G+   A +L ++M   G  PD ITY ++I    +   L   R+L++ M+ KGLS
Sbjct: 548 CGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLS 607

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           P  VT   L + +  +     A      ++    R  + T N L+  LC   ++D A   
Sbjct: 608 PCEVTRLTLAYEYCKKDDSSTAINVLDRLEK---RQWIRTVNTLVRKLCSEGKLDMAALF 664

Query: 651 FIDMEEEGILPNKYTYTILINE 672
           F  + ++    N+ T    +N+
Sbjct: 665 FHKLLDKEPNVNRVTLLGFMNK 686



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 141/521 (27%), Positives = 251/521 (48%), Gaps = 4/521 (0%)

Query: 174 KILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRM 233
           +++  +++ + +   +++ + +  +M   GL+   +  N ++ V    G    A  ++  
Sbjct: 155 EVMQCMVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVE 214

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M + G+ P  V++  M+ + C  G + EA + L  M  RG   +  T  ++I  F + G 
Sbjct: 215 MCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGY 274

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           + +  G    M+++GL  +  ++  +I G  ++G + +A  L EEMV RG  P + T+  
Sbjct: 275 VNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTT 334

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKN-VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
           LI GLCK G    A   F +++R +   P++ +Y  ++ GYC+   +  A +L   ++ +
Sbjct: 335 LIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQ 394

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
            LVP   TY TLIDG C+ G+   A +L + M  +G  P++ TY  +++G CK G+L  A
Sbjct: 395 GLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEA 454

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
               N++   GLQ D   YT  ++   +  DT+ +     +ML  GF PD+ +Y  L+  
Sbjct: 455 YRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISX 514

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
            C+   ++E+  L  + V  G IP   TYTS+I      G+      LF  M   G +P 
Sbjct: 515 FCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPD 574

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
            +TY  LI       +L+ A   +  M  KG+ P  +T   L    C+      A  +  
Sbjct: 575 SITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLD 634

Query: 653 DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
            +E+   +    T   L+ + C+ G    A   + ++LD+E
Sbjct: 635 RLEKRQWI---RTVNTLVRKLCSEGKLDMAALFFHKLLDKE 672


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  258 bits (659), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 150/546 (27%), Positives = 275/546 (50%), Gaps = 22/546 (4%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
           F+ M+R+       +CN++I V         A  +YR M    I  +I ++N ++  FC 
Sbjct: 94  FDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCD 153

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI-------------- 301
             ++  +L    ++   G  P+ VT+N L+ G      + +A  L               
Sbjct: 154 CHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVAL 213

Query: 302 -RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
              M+++GL     ++N +I G   +G ++EA  L  +MV +G+   + TY  ++ G+CK
Sbjct: 214 FDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCK 273

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G    A +   +M   ++ PD++ Y+ ++   C+ G+  +A  LF E+  + + P V T
Sbjct: 274 MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 333

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YN +IDG C +G    AQ+L  +MI + I PDV+T+  +++ S K G L  A +  +EML
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 393

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            + + PD   Y + I G  K     +A  + + M +    PD++T+N ++   C+   ++
Sbjct: 394 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVD 449

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           E  +LLR++   G + +  TY ++IH   E+ +L   +DLF  M+  G+ P  +T  +L+
Sbjct: 450 EGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILL 509

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
           +      +LE A   F  +Q+  I  + + YN +I+G+C+  ++D+A+ LF  +   G+ 
Sbjct: 510 YGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 569

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL---LKQLDKDYKVHA 717
           P+  TY ++I+  C      +A  L+ +M D   EPD  T++ L+   LK  + D  +  
Sbjct: 570 PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 629

Query: 718 VEYLES 723
           +  + S
Sbjct: 630 ISEMRS 635



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 160/484 (33%), Positives = 241/484 (49%), Gaps = 11/484 (2%)

Query: 116 TQPGVKRDEFVFCTILEILIESGLLRSAY----WVVETVVCVNMHGILDVLIGGGLSSCV 171
           T+ G + D   F T+L  L     +  A     ++VET   +    + D ++  GL+  V
Sbjct: 168 TKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGF-LEAVALFDQMVEIGLTPVV 226

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
            I    L+  +  +  ++E   LV NKM+  GL  DV     I+  +   G +  A  + 
Sbjct: 227 -ITFNTLINGLCLEGRVLEAAALV-NKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLL 284

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M E  IKP +V Y+ ++D  CK+G   +A  L  EM  +G +PN  TYN +I GF   
Sbjct: 285 SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 344

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G    A+ L+RDM++  +     ++N +I    ++G L EA  L +EM+ R + P   TY
Sbjct: 345 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTY 404

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           N +IYG CK  R  DA+H F  M      PD++++NT++  YCR+  + E   L  E+  
Sbjct: 405 NSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISR 460

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           R LV    TYNTLI G C   +L  AQ L + MI+ G+ PD IT  I++ G C+   L  
Sbjct: 461 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 520

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A E F  +    +  D  AY   I G  K     EA+ L   +   G  PD+ TYNV++ 
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS 580

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           G C   ++ +AN L  KM  +G  PD+ TY ++I   L+ G++ +  +L + M   G S 
Sbjct: 581 GFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSG 640

Query: 592 TLVT 595
              T
Sbjct: 641 DAFT 644



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 146/488 (29%), Positives = 248/488 (50%), Gaps = 19/488 (3%)

Query: 193 LLVFNKMLRNGLLPDVKNCN----------RIIKVLRDNGFSVK-----AREVYRMMGEF 237
           L  F K+ + G  PDV   N          RI + L   G+ V+     A  ++  M E 
Sbjct: 161 LSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEI 220

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G+ P ++T+NT+++  C EG + EA  L+ +M G+G   + VTY  ++ G  + G+ + A
Sbjct: 221 GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 280

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L+  M +  +K     Y+ II    + G   +A  L  EM+ +G+AP + TYN +I G
Sbjct: 281 LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDG 340

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
            C +GR SDA+    +M+ + + PD++++N L+    + G + EA  L DE+  R + P 
Sbjct: 341 FCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPD 400

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
            VTYN++I G C++   + A+ + + M +    PDV+T+  +++  C+   +    +   
Sbjct: 401 TVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLR 456

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           E+ R+GL  +   Y T I G  ++ + + A  L +EM++ G  PD IT N+L++G C+  
Sbjct: 457 EISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENE 516

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            LEEA EL   +       D + Y  IIH   +   +    DLF ++   G+ P + TY 
Sbjct: 517 KLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYN 576

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           V+I     +  +  A + F +M+  G  P+  TYN LI G  +   ID++  L  +M   
Sbjct: 577 VMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSN 636

Query: 658 GILPNKYT 665
           G   + +T
Sbjct: 637 GFSGDAFT 644



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/410 (32%), Positives = 209/410 (50%), Gaps = 19/410 (4%)

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
           A++L  +M  R +   + ++NILI   C   ++S +   F ++ +    PD++++NTLL+
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184

Query: 392 GYCRSGNIGEA-----------FL----LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
           G C    I EA           FL    LFD++    L P V+T+NTLI+GLC  G +  
Sbjct: 185 GLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
           A  L   M+ +G+  DV+TY  +VNG CKMG+   A    ++M    ++PD   Y+  I 
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIID 304

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
              K G  S+A  L  EML KG  P++ TYN ++ G C  G   +A  LLR M+     P
Sbjct: 305 RLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 364

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
           D +T+ ++I AS++ G L     L + ML + + P  VTY  +I+      R + A   F
Sbjct: 365 DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 424

Query: 617 SEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNA 676
             M      P+V+T+N +I+  CR +R+D+   L  ++   G++ N  TY  LI+  C  
Sbjct: 425 DLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEV 480

Query: 677 GNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
            N   A  L++EM+   + PD  T + LL    + +    A+E  E + +
Sbjct: 481 DNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQM 530



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 135/473 (28%), Positives = 234/473 (49%), Gaps = 5/473 (1%)

Query: 170 CVSIKILDLLLLI-YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR 228
           C+  +I + L L  Y  ++   + + +F++M+  GL P V   N +I  L   G  ++A 
Sbjct: 187 CLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAA 246

Query: 229 EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
            +   M   G+   +VTY T+++  CK G+ + AL LL +M+     P+ V Y+ +I   
Sbjct: 247 ALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL 306

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
            ++G    A+ L  +ML+ G+  +  +YN +I G+   G   +A  L  +M+ R + P +
Sbjct: 307 CKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDV 366

Query: 349 ATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDE 408
            T+N LI    K G++ +A     EML + + PD ++YN+++YG+C+     +A  +FD 
Sbjct: 367 LTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDL 426

Query: 409 LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
           + S    P VVT+NT+ID  CR   ++   QL   +  +G++ +  TY  +++G C++ N
Sbjct: 427 MAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN 482

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
           L+ A++ F EM+  G+ PD       + G  +     EA  L E +       D + YN+
Sbjct: 483 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 542

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           ++HG+CK   ++EA +L   +   G  PD  TY  +I        +     LF+ M   G
Sbjct: 543 IIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNG 602

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
             P   TY  LI      G ++ +    SEM+  G   +  T       +CR+
Sbjct: 603 HEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRV 655



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 113/356 (31%), Positives = 180/356 (50%), Gaps = 4/356 (1%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F++ML  G+ P+V   N +I      G    A+ + R M E  I P ++T+N ++ +  
Sbjct: 318 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASV 377

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           KEG++ EA +L  EM  R   P+ VTYN +I GF ++   + A+     M  L       
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAK----HMFDLMASPDVV 433

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           ++N II  Y     + E + L  E+  RG+     TYN LI+G C+   ++ A+  F EM
Sbjct: 434 TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           +   V PD I+ N LLYG+C +  + EA  LF+ ++   +    V YN +I G+C+   +
Sbjct: 494 ISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKV 553

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A  L  ++   G+ PDV TY +M++G C    +S A   F++M   G +PD   Y T 
Sbjct: 554 DEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTL 613

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           I G LK G+  ++  L  EM + GF  D  T  +    +C++   E     LR  +
Sbjct: 614 IRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSDEEIIENYLRPKI 669



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 156/323 (48%), Gaps = 15/323 (4%)

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
           ++ +A   FD +       T V  N +I    R    +VA  L   M  + I  ++ ++ 
Sbjct: 86  SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG---ELKLGDT---------- 504
           I++   C    LS +   F ++ + G QPD   + T + G   E ++ +           
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205

Query: 505 --SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
              EA  L ++M+  G  P +IT+N L++GLC  G + EA  L+ KMVG G   D +TY 
Sbjct: 206 GFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
           +I++   +MGD +   +L + M    + P +V Y+ +I      G    A   FSEM  K
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
           GI PNV TYN +I+G C   R   A  L  DM E  I P+  T+  LI+ +   G   EA
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEA 385

Query: 683 LRLYKEMLDREIEPDYCTHSALL 705
            +L  EML R I PD  T+++++
Sbjct: 386 EKLCDEMLHRCIFPDTVTYNSMI 408



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 114/241 (47%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           PDV   N II V        +  ++ R +   G+  +  TYNT++  FC+   +  A +L
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 489

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
             EM   G  P+ +T N+L+ GF  N +LE+A  L   +    + +   +YN II G  +
Sbjct: 490 FQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCK 549

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
              + EA +L   +   GV P + TYN++I G C    +SDA   F +M      PD  +
Sbjct: 550 GSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNST 609

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           YNTL+ G  ++G I ++  L  E+RS        T     + +CR  D E+ +      I
Sbjct: 610 YNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSDEEIIENYLRPKI 669

Query: 446 N 446
           N
Sbjct: 670 N 670


>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
 gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
          Length = 844

 Score =  258 bits (659), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 151/557 (27%), Positives = 294/557 (52%), Gaps = 4/557 (0%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           +I   ++L+  Y +    +  L +  ++L+NGL PD  + + I   ++D G   KA  ++
Sbjct: 175 TIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKD-GEVDKAHCLF 233

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M E G+ P I+  N+++   CK  EM +A  ++ +M   G +P+  TY+++I G  ++
Sbjct: 234 LEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKS 293

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
             +++A  ++  M++ G + ++ +YN +I GYS  G+  E++ + ++M + GV PT+   
Sbjct: 294 KAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNC 353

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN--IGEAFLLFDEL 409
           N  I+ L K GR ++A+  F  M+ K   PDIISY+T+L+GY  + +  + +   +F+ +
Sbjct: 354 NSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLM 413

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
            ++ + P    +N LI+   R G ++ A  + E+M N+G++PD +T+  +++  C++G L
Sbjct: 414 LTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRL 473

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY-NV 528
             A   FN M+  G+ P    Y   I G    G+  +A  L  EM+ K  PP  + Y + 
Sbjct: 474 DDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSS 533

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           +++ LCK G + E  +++  MV  G  P+ +T+ S++     +G++     L + M   G
Sbjct: 534 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 593

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
           + P    Y  L+  +   GR++ A   F +M  KG++P  + Y+ +++GL + RR   A 
Sbjct: 594 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAK 653

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQ 708
            +F +M E G   + +TY +++   C      EA  L +++    ++ D  T + ++   
Sbjct: 654 KMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAM 713

Query: 709 LDKDYKVHAVEYLESLT 725
                +  A E  ++++
Sbjct: 714 FKVGRRQEAKELFDAIS 730



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 137/468 (29%), Positives = 247/468 (52%), Gaps = 4/468 (0%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P+I TYN ++D + +       L ++  +   G  P+  +Y+ LI GF ++GE+++A  L
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 232

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
             +M++ G+       N II    +   + +A ++ ++MV  G+AP L TY+++I GLCK
Sbjct: 233 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 292

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
              +  A     +M+     P+ I+YN+L++GY  SG   E+  +F ++ S  ++PTV  
Sbjct: 293 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 352

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA--REFFNE 478
            N+ I  L ++G    A+ + ++M+ +G  PD+I+Y+ M++G     +  +A     FN 
Sbjct: 353 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 412

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           ML KG+ P++  +   I    + G   +A  + E+M  KG  PD +T+  ++  LC++G 
Sbjct: 413 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 472

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY-T 597
           L++A      MV  G  P    Y  +I      G+L + ++L + M+ K + P  V Y +
Sbjct: 473 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 532

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
            +I+     GR+         M   G RPNV+T+N+L+ G C +  +++A+ L   M   
Sbjct: 533 SIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 592

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           GI PN Y Y  L++  C  G   +AL ++++ML + ++P    +S +L
Sbjct: 593 GIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIIL 640



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 143/546 (26%), Positives = 265/546 (48%), Gaps = 38/546 (6%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  + K   V++   +F +M+  G+LP +  CN IIK L       KA  + + M + G
Sbjct: 216 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 275

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS--------- 289
           I P + TY+ ++D  CK   M +A  +L +M   G  PN +TYN LI G+S         
Sbjct: 276 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 335

Query: 290 --------------------------RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGY 323
                                     ++G   +A+ +   M+  G K    SY+ ++ GY
Sbjct: 336 RVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGY 395

Query: 324 SEK--GLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           +      L +  N+   M+T+G+AP    +NILI    + G +  A   F +M  K +IP
Sbjct: 396 ATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIP 455

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           D +++ T++   CR G + +A   F+ +    + P+   Y  LI G C +G+L  A++L 
Sbjct: 456 DTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELI 515

Query: 442 ENMINQGILPDVITY-TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
             M+N+ I P  + Y + ++N  CK G ++  ++  + M++ G +P+   + + + G   
Sbjct: 516 SEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCL 575

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
           +G+  EA+ L + M + G  P+   Y  LV G CK G +++A  + R M+  G  P  + 
Sbjct: 576 VGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL 635

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           Y+ I+H   +       + +F+ M+  G + ++ TY V++         + A M   ++ 
Sbjct: 636 YSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLF 695

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
              ++ ++IT+N +I+ + ++ R  +A  LF  +   G++PN  TY+++I       +++
Sbjct: 696 AMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYE 755

Query: 681 EALRLY 686
           EA  L+
Sbjct: 756 EADNLF 761



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 154/596 (25%), Positives = 285/596 (47%), Gaps = 19/596 (3%)

Query: 93  LVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVC 152
           +++ L +++E  +      + V++  G+  D F +  I++ L +S  +  A  V+E +V 
Sbjct: 251 IIKELCKMKEMDKAESIVQKMVDS--GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMV- 307

Query: 153 VNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCN 212
                       G   + ++    + L+  Y+   M  + + VF +M   G++P V NCN
Sbjct: 308 ----------EAGTRPNSIT---YNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCN 354

Query: 213 RIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE--MQEALELLWEMQ 270
             I  L  +G + +A+ ++  M   G KP I++Y+TML  +    +  + +   +   M 
Sbjct: 355 SFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLML 414

Query: 271 GRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLV 330
            +G +PN   +N+LI  ++R G +++A  +  DM   G+     ++  +I      G L 
Sbjct: 415 TKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLD 474

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISY-NTL 389
           +AL+    MV  GV P+ A Y  LI G C  G +  A+    EM+ K++ P  + Y +++
Sbjct: 475 DALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSI 534

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
           +   C+ G + E   + D +      P VVT+N+L++G C  G++E A  L + M + GI
Sbjct: 535 INNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGI 594

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
            P+   Y  +V+G CK G +  A   F +ML KG++P    Y+  + G  +   T+ A +
Sbjct: 595 EPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKK 654

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           +  EM+  G    + TY V++ GLC+    +EAN LL K+       D IT+  +I A  
Sbjct: 655 MFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMF 714

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
           ++G  +  ++LF+ +   GL P + TY+++I         E A   F  ++  G   +  
Sbjct: 715 KVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSR 774

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
             N ++  L     + +A      + E  +     T ++L +     G ++E ++L
Sbjct: 775 LLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKL 830



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 115/376 (30%), Positives = 204/376 (54%), Gaps = 3/376 (0%)

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
           R   PT+ TYNILI    +  R          +L+  + PD  SY +L+YG+ + G + +
Sbjct: 170 RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDK 228

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           A  LF E+  + ++P ++  N++I  LC+  +++ A+ + + M++ GI PD+ TY+++++
Sbjct: 229 AHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIID 288

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
           G CK   +  A     +M+  G +P+   Y + I G    G  +E+ R+ ++M + G  P
Sbjct: 289 GLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIP 348

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD--LRRGRD 579
            +   N  +H L K G   EA  +   MV  G  PD I+Y++++H      D  L    +
Sbjct: 349 TVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHN 408

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
           +FN ML KG++P    + +LI+A+A  G ++ A + F +MQ KG+ P+ +T+  +I+ LC
Sbjct: 409 IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLC 468

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
           R+ R+D A   F  M + G+ P++  Y  LI   CN G   +A  L  EM++++I P   
Sbjct: 469 RIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 528

Query: 700 THSALLLKQLDKDYKV 715
            + + ++  L K+ +V
Sbjct: 529 KYFSSIINNLCKEGRV 544


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 154/498 (30%), Positives = 256/498 (51%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +FN +LR    P      +I+  L  +        +++ M   GIKP+ V +N +++ FC
Sbjct: 57  LFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFC 116

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           + G +  A  +L ++   G  P+ +T N  I GF   G++ QA      ++ LG  +   
Sbjct: 117 QLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQV 176

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           SY  +I G  + G    AL L   +  + V   +  Y+ +I  +CK   V+DA   + EM
Sbjct: 177 SYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEM 236

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           + + +  +I++Y+ L+ G+C  G + +A  LF+++ S N+ P V T+N L+D  C+ G +
Sbjct: 237 VSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRV 296

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A+     M+ QGI PD++TY  +++G C +  ++MA+   N M  +G+     +Y   
Sbjct: 297 KEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIV 356

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I G  K+    +A +L +EM  K   P++ITYN L+ GLCK G +  A EL+  M   G 
Sbjct: 357 INGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQ 416

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            PD ITY+SI+ A  +   + +   L   +  +G+ P + TYT+LI      GRLE A  
Sbjct: 417 QPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARN 476

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F ++ VKG    V TY  +I G C     D+A  L   M++   +P+  TY I+I    
Sbjct: 477 IFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLF 536

Query: 675 NAGNWQEALRLYKEMLDR 692
           +     +A +L +EM+ R
Sbjct: 537 DKDENDKAEKLLREMITR 554



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 146/496 (29%), Positives = 253/496 (51%)

Query: 217 VLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSP 276
              +N   V A  ++  +      P  + +  +L S  K       L L  +M+ RG  P
Sbjct: 44  TFHNNNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKP 103

Query: 277 NGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLE 336
           N V +N+LI  F + G +  A  ++  +LK+G +    + N  I G+  KG + +ALN  
Sbjct: 104 NFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFH 163

Query: 337 EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS 396
           +++V  G      +Y  LI GLCK G    A      +  K V  D++ Y+T++   C+ 
Sbjct: 164 DKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKD 223

Query: 397 GNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
            N+ +AF L+ E+ SR +   +VTY+ LI G C  G L+ A  L   M ++ I PDV T+
Sbjct: 224 KNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTF 283

Query: 457 TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA 516
            I+V+  CK G +  A+     M+++G++PD   Y + + G   + + + A  +   M  
Sbjct: 284 NILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSH 343

Query: 517 KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
           +G    + +YN++++G CK+  +++A +L ++M      P+ ITY S+I    + G +  
Sbjct: 344 RGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISY 403

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
             +L + M  +G  P ++TY+ ++ A      ++ A     +++ +GIRPN+ TY  LI+
Sbjct: 404 ALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILID 463

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
           GLC+  R++ A  +F D+  +G      TYT++I   C+ G + EAL L  +M D    P
Sbjct: 464 GLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIP 523

Query: 697 DYCTHSALLLKQLDKD 712
           D  T+  ++    DKD
Sbjct: 524 DAITYEIIICSLFDKD 539



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 144/468 (30%), Positives = 241/468 (51%)

Query: 193 LLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDS 252
           L +F KM   G+ P+  N N +I      G    A  V   + + G +P  +T NT +  
Sbjct: 90  LSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKG 149

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
           FC +G++ +AL    ++   G   + V+Y  LI G  + GE   A  L+R +    +++ 
Sbjct: 150 FCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLD 209

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
              Y+ II    +   + +A +L  EMV+R ++  + TY+ LI G C  G++ DA   F 
Sbjct: 210 VVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFN 269

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
           +M  +N+ PD+ ++N L+  +C+ G + EA      +  + + P +VTYN+L+DG C   
Sbjct: 270 KMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVN 329

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
           ++ +A+ +   M ++G+   V +Y I++NG CK+  +  A + F EM  K + P+   Y 
Sbjct: 330 EVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYN 389

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
           + I G  K G  S A  L + M  +G  PD+ITY+ ++  LCK   +++A  LL K+   
Sbjct: 390 SLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQ 449

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
           G  P+  TYT +I    + G L   R++F ++L KG + T+ TYTV+I    + G  + A
Sbjct: 450 GIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEA 509

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
               S+M+     P+ ITY  +I  L      D+A  L  +M   G+L
Sbjct: 510 LSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLL 557



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 152/526 (28%), Positives = 254/526 (48%), Gaps = 45/526 (8%)

Query: 186 KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVT 245
           K  + Q L   +K++  G   D  +   +I  L   G +  A E+ R +    ++  +V 
Sbjct: 153 KGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVM 212

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           Y+T++DS CK+  + +A +L  EM  R  S N VTY+ LI+GF   G+L+ A GL   M 
Sbjct: 213 YSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMT 272

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
              +    +++N ++  + ++G + EA N    M+ +G+ P + TYN L+ G C    V+
Sbjct: 273 SENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVN 332

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
            A+     M  + V   + SYN ++ G+C+   + +A  LF E+  + + P V+TYN+LI
Sbjct: 333 MAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLI 392

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           DGLC+ G +  A +L + M ++G  PD+ITY+ +++  CK   +  A     ++  +G++
Sbjct: 393 DGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIR 452

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           P+ + YT  I G  K G   +A  + E++L KG+   + TY V++ G C  G  +EA  L
Sbjct: 453 PNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSL 512

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY---TVLIHA 602
           L KM  +  IPD ITY  II +  +  +  +   L   M+ +GL  + + Y   ++   A
Sbjct: 513 LSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFMA 572

Query: 603 HAAR------------------GRLELAFMYF------SEMQVKGIR-PNVI-------- 629
             A                    +L L  +Y       S M+ K +  P+VI        
Sbjct: 573 APAHFLNNDSLQCTSSQESGNWAKLLLERIYCDCVLTKSNMRDKDVECPSVIIYSTCDWS 632

Query: 630 ---------TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
                    TY  +I G C     D++  L   ME  G +P+  TY
Sbjct: 633 KQGYILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAVTY 678



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 168/368 (45%), Gaps = 49/368 (13%)

Query: 153 VNM-HGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNC 211
           VNM   IL+ +   G+++  +++  ++++  + K  MV+Q + +F +M    + P+V   
Sbjct: 331 VNMAKSILNTMSHRGVTA--TVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITY 388

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
           N +I  L  +G    A E+  +M + G +P I+TY+++LD+ CK   + +A+ LL +++ 
Sbjct: 389 NSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKD 448

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
           +G  PN  TY +LI G  + G LE AR +  D+L  G  ++ ++Y  +I G+   GL  E
Sbjct: 449 QGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDE 508

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
           AL+L  +M      P   TY I+I  L        A     EM+ + ++   + Y +   
Sbjct: 509 ALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSL 568

Query: 392 GY--------------C----RSGNIG---------EAFLLFDELRSRNL-VPTVVTYNT 423
            +              C     SGN           +  L    +R +++  P+V+ Y+T
Sbjct: 569 SFMAAPAHFLNNDSLQCTSSQESGNWAKLLLERIYCDCVLTKSNMRDKDVECPSVIIYST 628

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
                C +               QG + DV TYT+M+ G C  G    +    ++M   G
Sbjct: 629 -----CDWS-------------KQGYILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNG 670

Query: 484 LQPDRFAY 491
             PD   Y
Sbjct: 671 CIPDAVTY 678



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/271 (23%), Positives = 115/271 (42%), Gaps = 40/271 (14%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           ILD L     K  +V++ + +  K+   G+ P++     +I  L   G    AR ++  +
Sbjct: 426 ILDAL----CKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDL 481

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
              G   ++ TY  M+  FC  G   EAL LL +M+   C P+ +TY ++I       E 
Sbjct: 482 LVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDEN 541

Query: 295 EQARGLIRDMLKLGLKVS---------------AHSYN--PIICGYSEKG-----LLVEA 332
           ++A  L+R+M+  GL  S               AH  N   + C  S++      LL+E 
Sbjct: 542 DKAEKLLREMITRGLLYSFLEYGSWSLSFMAAPAHFLNNDSLQCTSSQESGNWAKLLLER 601

Query: 333 LNLEEEMVTRGV-APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
           +  +  +    +    +   +++IY  C W +             +  I D+ +Y  ++ 
Sbjct: 602 IYCDCVLTKSNMRDKDVECPSVIIYSTCDWSK-------------QGYILDVNTYTVMIQ 648

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           G+C  G   E+  L  ++     +P  VTY+
Sbjct: 649 GFCSHGLFDESLALLSKMEVNGCIPDAVTYD 679


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 162/557 (29%), Positives = 287/557 (51%), Gaps = 8/557 (1%)

Query: 166 GLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSV 225
           GL + V +  + L  L + K+S  +   ++ ++M   G+ PD  + + ++K L ++  S 
Sbjct: 149 GLKTDVIVANILLKCLCHAKRS-DDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQ 207

Query: 226 KAREVYRMM--GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNV 283
           +A ++   M     G  P++V+YNT++  F +EGE+ +A  L  EM  +G  P+ VTY+ 
Sbjct: 208 RALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSS 267

Query: 284 LITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG 343
            I    +   +++A  ++R M+  G +    +YN +I GYS  G   E   +  EM  RG
Sbjct: 268 YIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRG 327

Query: 344 VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF 403
           + P + T N  +  LCK G+  +A   F  M  K   PD+++Y+ LL+GY   G + +  
Sbjct: 328 LMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDML 387

Query: 404 LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
            LF+ +    +V     YN LID   + G ++ A  +   M  +G++PD  TY  ++   
Sbjct: 388 NLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAF 447

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP-PD 522
            +MG L+ A + FN+M+  GL+PD   Y + I G    G+  +A  L  EM+++G P P+
Sbjct: 448 SRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPN 507

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
            + +N +++ LCK G + EA ++   ++  G  PD IT+ S+I     +G + +   + +
Sbjct: 508 TVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLD 567

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
            M+  G+ P +VTY+ L+  +   GR++   + F EM  KG++P  ITY  +++GL    
Sbjct: 568 AMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDG 627

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
           R   A  +  +M E G   +  T  I++   C      EA+ L+K++    ++ +     
Sbjct: 628 RTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNI---- 683

Query: 703 ALLLKQLDKDYKVHAVE 719
           A++   +D  YKV   E
Sbjct: 684 AIINTMIDAMYKVRKRE 700



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 155/592 (26%), Positives = 294/592 (49%), Gaps = 18/592 (3%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           GV+ D   + T+L+ L E    + A  ++ T+V  +         GG   + VS    + 
Sbjct: 185 GVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKS---------GGCSPNVVS---YNT 232

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           ++  + ++  V +   +F++M++ G++PDV   +  I  L       KA  V R M   G
Sbjct: 233 VIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNG 292

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
            +P  VTYN M+  +   G+ +E   +  EM  RG  P+  T N  ++   ++G+ ++A 
Sbjct: 293 FEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAA 352

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
                M   G K    +Y+ ++ GY+ +G +V+ LNL   M   G+    + YNILI   
Sbjct: 353 EFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAY 412

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
            K G + +A   F +M  + V+PD  +Y T++  + R G + +A   F+++ +  L P  
Sbjct: 413 GKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDT 472

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGI-LPDVITYTIMVNGSCKMGNLSMAREFFN 477
           + YN+LI G C +G+L  A++L   M+++GI  P+ + +  ++N  CK G +  A++ F+
Sbjct: 473 IVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFD 532

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            ++  G +PD   + + I G   +G   +A+ + + M++ G  PD++TY+ L+ G C+ G
Sbjct: 533 LVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNG 592

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            +++   L R+M+  G  P  ITY  I+H     G     + + + M+  G +  + T  
Sbjct: 593 RIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCG 652

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           +++         + A   F ++    ++ N+   N +I+ + ++R+ ++A  LF  +   
Sbjct: 653 IILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISAT 712

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQL 709
           G++PN  TY ++I      G+ +EA  ++  M     E   C  S+ LL  +
Sbjct: 713 GLVPNASTYGVMITNLLKEGSVEEADNMFSLM-----EKSGCAPSSRLLNNI 759



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 145/539 (26%), Positives = 253/539 (46%), Gaps = 74/539 (13%)

Query: 241 PSIVTYNTMLDSFCKEGE-----------MQEALE------------------------- 264
           P++ TYN ++D  C+              ++  L+                         
Sbjct: 117 PTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNV 176

Query: 265 LLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL--GLKVSAHSYNPIICG 322
           LL  M   G  P+ ++Y+ ++     +   ++A  L+  M+K   G   +  SYN +I G
Sbjct: 177 LLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHG 236

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
           +  +G + +A NL  EM+ +GV P + TY+  I  LCK   +  A     +M+     PD
Sbjct: 237 FFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPD 296

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
            ++YN +++GY   G   E   +F E+  R L+P + T N+ +  LC++G  + A +  +
Sbjct: 297 KVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFD 356

Query: 443 NMINQGILPDVITYTIMVNGSC-----------------------------------KMG 467
           +M  +G  PD++TY+++++G                                     K G
Sbjct: 357 SMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRG 416

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
            +  A   F +M  +G+ PD + Y T IA   ++G  ++A     +M+A G  PD I YN
Sbjct: 417 MMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYN 476

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFI-PDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
            L+ G C  G+L +A EL+ +M+  G   P+ + + SII++  + G +   +D+F+ ++ 
Sbjct: 477 SLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIH 536

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
            G  P ++T+  LI  +   G++E AF     M   GI P+V+TY+AL++G CR  RID 
Sbjct: 537 IGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDD 596

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
              LF +M  +G+ P   TY I+++   N G    A ++  EM++     D  T   +L
Sbjct: 597 GLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIIL 655



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 150/513 (29%), Positives = 249/513 (48%), Gaps = 29/513 (5%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSV-----KAREVYRMMGEFGI 239
           K   +++  LV  +M+ NG  PD    N +I     +G+S+     +   ++R M   G+
Sbjct: 274 KARAMDKAELVLRQMISNGFEPDKVTYNCMI-----HGYSILGQWKETAGMFREMTRRGL 328

Query: 240 KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
            P I T N+ + S CK G+ +EA E    M  +G  P+ VTY+VL+ G++  G +     
Sbjct: 329 MPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLN 388

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
           L   M   G+      YN +I  Y ++G++ EA+ +  +M  RGV P   TY  +I    
Sbjct: 389 LFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFS 448

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV-PTV 418
           + GR++DA  +F +M+   + PD I YN+L+ G+C  GN+ +A  L  E+ SR +  P  
Sbjct: 449 RMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNT 508

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           V +N++I+ LC+ G +  AQ + + +I+ G  PDVIT+  +++G   +G +  A    + 
Sbjct: 509 VFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDA 568

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M+  G++PD   Y+  + G  + G   +   L  EML+KG  P  ITY +++HGL   G 
Sbjct: 569 MISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGR 628

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR------DLFNNMLRKGLSPT 592
              A ++  +M+  G   D I+   II     +G L R         LF  +    +   
Sbjct: 629 TVGAKKMCHEMIESGTTMD-ISTCGII-----LGGLCRNNCDDEAIALFKKLGAMNVKFN 682

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
           +     +I A     + E A   F  +   G+ PN  TY  +I  L +   +++A  +F 
Sbjct: 683 IAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFS 742

Query: 653 DMEEEGILPNKYTYTILI------NENCNAGNW 679
            ME+ G  P+      +I       E   AGN+
Sbjct: 743 LMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNY 775



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 149/477 (31%), Positives = 224/477 (46%), Gaps = 39/477 (8%)

Query: 268 EMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKG 327
           E + R   P   TYN+L+    R         L    LK GLK      N ++       
Sbjct: 109 EARPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAK 168

Query: 328 LLVEALN-LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN--VIPDII 384
              +A+N L   M   GV P   +Y+ ++  LC+  R   A      M++K+    P+++
Sbjct: 169 RSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVV 228

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
           SYNT+++G+ R G + +A  LF E+  + +VP VVTY++ ID LC+   ++ A+ +   M
Sbjct: 229 SYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQM 288

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
           I+ G  PD +TY  M++G   +G        F EM R+GL PD F   + ++   K G +
Sbjct: 289 ISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKS 348

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLC------------------------------ 534
            EA    + M AKG  PDL+TY+VL+HG                                
Sbjct: 349 KEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNIL 408

Query: 535 -----KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
                K G ++EA  +  +M   G +PD  TY ++I A   MG L    D FN M+  GL
Sbjct: 409 IDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGL 468

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI-RPNVITYNALINGLCRLRRIDQAY 648
            P  + Y  LI      G L  A    SEM  +GI RPN + +N++IN LC+  R+ +A 
Sbjct: 469 KPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQ 528

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            +F  +   G  P+  T+  LI+     G  ++A  +   M+   IEPD  T+SALL
Sbjct: 529 DIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALL 585



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 141/482 (29%), Positives = 230/482 (47%), Gaps = 36/482 (7%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTY-------- 246
           +F +M R GL+PD+  CN  +  L  +G S +A E +  M   G KP +VTY        
Sbjct: 319 MFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYA 378

Query: 247 ---------------------------NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGV 279
                                      N ++D++ K G M EA+ +  +MQ RG  P+  
Sbjct: 379 AEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAW 438

Query: 280 TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
           TY  +I  FSR G L  A      M+ +GLK     YN +I G+   G LV+A  L  EM
Sbjct: 439 TYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEM 498

Query: 340 VTRGVA-PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
           ++RG+  P    +N +I  LCK GRV +A+  F  ++     PD+I++N+L+ GY   G 
Sbjct: 499 MSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGK 558

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           + +AF + D + S  + P VVTY+ L+DG CR G ++    L   M+++G+ P  ITY I
Sbjct: 559 MEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGI 618

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           +++G    G    A++  +EM+  G   D       + G  +     EA  L +++ A  
Sbjct: 619 ILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMN 678

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
              ++   N ++  + K+   EEANEL   +   G +P+  TY  +I   L+ G +    
Sbjct: 679 VKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEAD 738

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           ++F+ M + G +P+      +I     +G +  A  Y S++  K I     T + +++  
Sbjct: 739 NMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLF 798

Query: 639 CR 640
            R
Sbjct: 799 SR 800



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 125/399 (31%), Positives = 179/399 (44%), Gaps = 44/399 (11%)

Query: 337 EEMVTRGVAPTLATYNIL---------------IYG--------------------LCKW 361
           EE   R   PT+ TYNIL               ++G                    LC  
Sbjct: 108 EEARPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHA 167

Query: 362 GRVSDA----RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL--RSRNLV 415
            R  DA     HR  E+    V PD ISY+T+L   C       A  L   +  +S    
Sbjct: 168 KRSDDAVNVLLHRMPEL---GVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCS 224

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P VV+YNT+I G  R G++  A  L   M+ QG++PDV+TY+  ++  CK   +  A   
Sbjct: 225 PNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELV 284

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
             +M+  G +PD+  Y   I G   LG   E   +  EM  +G  PD+ T N  +  LCK
Sbjct: 285 LRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCK 344

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
            G  +EA E    M   G  PD +TY+ ++H     G +    +LFN+M   G+      
Sbjct: 345 HGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSV 404

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           Y +LI A+  RG ++ A + F++MQ +G+ P+  TY  +I    R+ R+  A   F  M 
Sbjct: 405 YNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMI 464

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
             G+ P+   Y  LI   C  GN  +A  L  EM+ R I
Sbjct: 465 AMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGI 503



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 183/390 (46%), Gaps = 50/390 (12%)

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE-------AFLLF-----DELRSRN 413
           D  H F E+LR+       + N  L    R+ +          A  LF     +E R R 
Sbjct: 55  DTHHLFDELLRQTTPVPERALNGFLTALARAPSSATCRDGPSLAVALFNRICREEARPRV 114

Query: 414 LVPTVVTYNTLIDGLCR----------YG---------DLEVAQQL---------KENMI 445
            +PTV TYN L+D  CR          +G         D+ VA  L          ++ +
Sbjct: 115 ALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAV 174

Query: 446 NQ--------GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK--GLQPDRFAYTTQI 495
           N         G+ PD I+Y+ ++   C+      A +  + M++K  G  P+  +Y T I
Sbjct: 175 NVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVI 234

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
            G  + G+ S+A  L  EM+ +G  PD++TY+  +  LCK  ++++A  +LR+M+ +GF 
Sbjct: 235 HGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFE 294

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           PD +TY  +IH    +G  +    +F  M R+GL P + T    + +    G+ + A  +
Sbjct: 295 PDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEF 354

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
           F  M  KG +P+++TY+ L++G      +     LF  ME  GI+ +   Y ILI+    
Sbjct: 355 FDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGK 414

Query: 676 AGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            G   EA+ ++ +M +R + PD  T+  ++
Sbjct: 415 RGMMDEAMLIFTQMQERGVMPDAWTYGTVI 444



 Score = 43.1 bits (100), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 67/137 (48%), Gaps = 1/137 (0%)

Query: 165 GGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS 224
           G ++   +I I++ ++    K    E+   +F+ +   GL+P+      +I  L   G  
Sbjct: 675 GAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSV 734

Query: 225 VKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVL 284
            +A  ++ +M + G  PS    N ++    ++GE+ +A   L ++ G+  S    T +++
Sbjct: 735 EEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLM 794

Query: 285 ITGFSRNGEL-EQARGL 300
           ++ FSR G+  EQ + L
Sbjct: 795 LSLFSRKGKYREQIKSL 811


>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
          Length = 808

 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 151/557 (27%), Positives = 294/557 (52%), Gaps = 4/557 (0%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           +I   ++L+  Y +    +  L +  ++L+NGL PD  + + I   ++D G   KA  ++
Sbjct: 99  TIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKD-GEVDKAHCLF 157

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M E G+ P I+  N+++   CK  EM +A  ++ +M   G +P+  TY+++I G  ++
Sbjct: 158 LEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKS 217

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
             +++A  ++  M++ G + ++ +YN +I GYS  G+  E++ + ++M + GV PT+   
Sbjct: 218 KAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNC 277

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN--IGEAFLLFDEL 409
           N  I+ L K GR ++A+  F  M+ K   PDIISY+T+L+GY  + +  + +   +F+ +
Sbjct: 278 NSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLM 337

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
            ++ + P    +N LI+   R G ++ A  + E+M N+G++PD +T+  +++  C++G L
Sbjct: 338 LTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRL 397

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY-NV 528
             A   FN M+  G+ P    Y   I G    G+  +A  L  EM+ K  PP  + Y + 
Sbjct: 398 DDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSS 457

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           +++ LCK G + E  +++  MV  G  P+ +T+ S++     +G++     L + M   G
Sbjct: 458 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 517

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
           + P    Y  L+  +   GR++ A   F +M  KG++P  + Y+ +++GL + RR   A 
Sbjct: 518 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAK 577

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQ 708
            +F +M E G   + +TY +++   C      EA  L +++    ++ D  T + ++   
Sbjct: 578 KMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAM 637

Query: 709 LDKDYKVHAVEYLESLT 725
                +  A E  ++++
Sbjct: 638 FKVGRRQEAKELFDAIS 654



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 137/468 (29%), Positives = 247/468 (52%), Gaps = 4/468 (0%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P+I TYN ++D + +       L ++  +   G  P+  +Y+ LI GF ++GE+++A  L
Sbjct: 98  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 156

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
             +M++ G+       N II    +   + +A ++ ++MV  G+AP L TY+++I GLCK
Sbjct: 157 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 216

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
              +  A     +M+     P+ I+YN+L++GY  SG   E+  +F ++ S  ++PTV  
Sbjct: 217 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 276

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA--REFFNE 478
            N+ I  L ++G    A+ + ++M+ +G  PD+I+Y+ M++G     +  +A     FN 
Sbjct: 277 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 336

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           ML KG+ P++  +   I    + G   +A  + E+M  KG  PD +T+  ++  LC++G 
Sbjct: 337 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 396

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY-T 597
           L++A      MV  G  P    Y  +I      G+L + ++L + M+ K + P  V Y +
Sbjct: 397 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 456

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
            +I+     GR+         M   G RPNV+T+N+L+ G C +  +++A+ L   M   
Sbjct: 457 SIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 516

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           GI PN Y Y  L++  C  G   +AL ++++ML + ++P    +S +L
Sbjct: 517 GIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIIL 564



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 143/546 (26%), Positives = 265/546 (48%), Gaps = 38/546 (6%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  + K   V++   +F +M+  G+LP +  CN IIK L       KA  + + M + G
Sbjct: 140 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 199

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS--------- 289
           I P + TY+ ++D  CK   M +A  +L +M   G  PN +TYN LI G+S         
Sbjct: 200 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 259

Query: 290 --------------------------RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGY 323
                                     ++G   +A+ +   M+  G K    SY+ ++ GY
Sbjct: 260 RVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGY 319

Query: 324 SE--KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           +      L +  N+   M+T+G+AP    +NILI    + G +  A   F +M  K +IP
Sbjct: 320 ATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIP 379

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           D +++ T++   CR G + +A   F+ +    + P+   Y  LI G C +G+L  A++L 
Sbjct: 380 DTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELI 439

Query: 442 ENMINQGILPDVITY-TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
             M+N+ I P  + Y + ++N  CK G ++  ++  + M++ G +P+   + + + G   
Sbjct: 440 SEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCL 499

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
           +G+  EA+ L + M + G  P+   Y  LV G CK G +++A  + R M+  G  P  + 
Sbjct: 500 VGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL 559

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           Y+ I+H   +       + +F+ M+  G + ++ TY V++         + A M   ++ 
Sbjct: 560 YSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLF 619

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
              ++ ++IT+N +I+ + ++ R  +A  LF  +   G++PN  TY+++I       +++
Sbjct: 620 AMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYE 679

Query: 681 EALRLY 686
           EA  L+
Sbjct: 680 EADNLF 685



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 141/511 (27%), Positives = 256/511 (50%), Gaps = 19/511 (3%)

Query: 93  LVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVC 152
           +++ L +++E  +      + V++  G+  D F +  I++ L +S  +  A  V+E +V 
Sbjct: 175 IIKELCKMKEMDKAESIVQKMVDS--GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMV- 231

Query: 153 VNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCN 212
                       G   + ++    + L+  Y+   M  + + VF +M   G++P V NCN
Sbjct: 232 ----------EAGTRPNSIT---YNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCN 278

Query: 213 RIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE--MQEALELLWEMQ 270
             I  L  +G + +A+ ++  M   G KP I++Y+TML  +    +  + +   +   M 
Sbjct: 279 SFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLML 338

Query: 271 GRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLV 330
            +G +PN   +N+LI  ++R G +++A  +  DM   G+     ++  +I      G L 
Sbjct: 339 TKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLD 398

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISY-NTL 389
           +AL+    MV  GV P+ A Y  LI G C  G +  A+    EM+ K++ P  + Y +++
Sbjct: 399 DALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSI 458

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
           +   C+ G + E   + D +      P VVT+N+L++G C  G++E A  L + M + GI
Sbjct: 459 INNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGI 518

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
            P+   Y  +V+G CK G +  A   F +ML KG++P    Y+  + G  +   T+ A +
Sbjct: 519 EPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKK 578

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           +  EM+  G    + TY V++ GLC+    +EAN LL K+       D IT+  +I A  
Sbjct: 579 MFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMF 638

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           ++G  +  ++LF+ +   GL P + TY+++I
Sbjct: 639 KVGRRQEAKELFDAISTYGLVPNIQTYSMMI 669



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 132/462 (28%), Positives = 236/462 (51%), Gaps = 24/462 (5%)

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN-PIICGYSEKGLLVE 331
           GCS +G      +    R+G+L++AR L+    +L    +    N P+    ++    + 
Sbjct: 12  GCSASGER----LVSADRDGDLQEARALLEYNPRLAWYSTFGGRNSPLHYAAAQGHHEIV 67

Query: 332 ALNLEEEM----------------VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           +L LE E+                  R   PT+ TYNILI    +  R          +L
Sbjct: 68  SLLLESEVEINLRNYRGQRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLL 127

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
           +  + PD  SY +L+YG+ + G + +A  LF E+  + ++P ++  N++I  LC+  +++
Sbjct: 128 KNGLGPDDFSY-SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMD 186

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            A+ + + M++ GI PD+ TY+++++G CK   +  A     +M+  G +P+   Y + I
Sbjct: 187 KAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLI 246

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
            G    G  +E+ R+ ++M + G  P +   N  +H L K G   EA  +   MV  G  
Sbjct: 247 HGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPK 306

Query: 556 PDHITYTSIIHASLEMGD--LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
           PD I+Y++++H      D  L    ++FN ML KG++P    + +LI+A+A  G ++ A 
Sbjct: 307 PDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAM 366

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
           + F +MQ KG+ P+ +T+  +I+ LCR+ R+D A   F  M + G+ P++  Y  LI   
Sbjct: 367 LIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGC 426

Query: 674 CNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKV 715
           CN G   +A  L  EM++++I P    + + ++  L K+ +V
Sbjct: 427 CNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRV 468



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 109/444 (24%), Positives = 200/444 (45%), Gaps = 5/444 (1%)

Query: 175 ILDLLLLIYTKKSMVEQCLL----VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV 230
           I+    +++   +  + CL     +FN ML  G+ P+    N +I      G   KA  +
Sbjct: 309 IISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLI 368

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
           +  M   G+ P  VT+ T++ S C+ G + +AL     M   G  P+   Y  LI G   
Sbjct: 369 FEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCN 428

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSY-NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           +GEL +A+ LI +M+   +      Y + II    ++G + E  ++ + MV  G  P + 
Sbjct: 429 HGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVV 488

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           T+N L+ G C  G + +A      M    + P+   Y TL+ GYC++G I +A  +F ++
Sbjct: 489 TFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDM 548

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
             + + PT V Y+ ++ GL +      A+++   MI  G    + TY +++ G C+    
Sbjct: 549 LHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCT 608

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A     ++    ++ D   +   I+   K+G   EA  L + +   G  P++ TY+++
Sbjct: 609 DEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMM 668

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           +  L K  S EEA+ L   +   G   D      I+   L   ++ +  +  + +    L
Sbjct: 669 ITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNL 728

Query: 590 SPTLVTYTVLIHAHAARGRLELAF 613
           +    T ++L    +  G ++  F
Sbjct: 729 TLEASTISLLASLFSREGMIKGLF 752



 Score = 41.2 bits (95), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 30/161 (18%), Positives = 75/161 (46%)

Query: 169 SCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR 228
           + VSI    ++L    + +  ++  ++  K+    +  D+   N +I  +   G   +A+
Sbjct: 588 TTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAK 647

Query: 229 EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
           E++  +  +G+ P+I TY+ M+ +  KE   +EA  L   ++  G + +    N ++   
Sbjct: 648 ELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRML 707

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLL 329
               E+ +A   +  + +  L + A + + +   +S +G++
Sbjct: 708 LNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMI 748


>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
          Length = 864

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 151/557 (27%), Positives = 294/557 (52%), Gaps = 4/557 (0%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           +I   ++L+  Y +    +  L +  ++L+NGL PD  + + I   ++D G   KA  ++
Sbjct: 155 TIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKD-GEVDKAHCLF 213

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M E G+ P I+  N+++   CK  EM +A  ++ +M   G +P+  TY+++I G  ++
Sbjct: 214 LEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKS 273

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
             +++A  ++  M++ G + ++ +YN +I GYS  G+  E++ + ++M + GV PT+   
Sbjct: 274 KAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNC 333

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN--IGEAFLLFDEL 409
           N  I+ L K GR ++A+  F  M+ K   PDIISY+T+L+GY  + +  + +   +F+ +
Sbjct: 334 NSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLM 393

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
            ++ + P    +N LI+   R G ++ A  + E+M N+G++PD +T+  +++  C++G L
Sbjct: 394 LTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRL 453

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY-NV 528
             A   FN M+  G+ P    Y   I G    G+  +A  L  EM+ K  PP  + Y + 
Sbjct: 454 DDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSS 513

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           +++ LCK G + E  +++  MV  G  P+ +T+ S++     +G++     L + M   G
Sbjct: 514 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 573

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
           + P    Y  L+  +   GR++ A   F +M  KG++P  + Y+ +++GL + RR   A 
Sbjct: 574 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAK 633

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQ 708
            +F +M E G   + +TY +++   C      EA  L +++    ++ D  T + ++   
Sbjct: 634 KMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAM 693

Query: 709 LDKDYKVHAVEYLESLT 725
                +  A E  ++++
Sbjct: 694 FKVGRRQEAKELFDAIS 710



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 137/468 (29%), Positives = 247/468 (52%), Gaps = 4/468 (0%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P+I TYN ++D + +       L ++  +   G  P+  +Y+ LI GF ++GE+++A  L
Sbjct: 154 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 212

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
             +M++ G+       N II    +   + +A ++ ++MV  G+AP L TY+++I GLCK
Sbjct: 213 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 272

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
              +  A     +M+     P+ I+YN+L++GY  SG   E+  +F ++ S  ++PTV  
Sbjct: 273 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 332

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA--REFFNE 478
            N+ I  L ++G    A+ + ++M+ +G  PD+I+Y+ M++G     +  +A     FN 
Sbjct: 333 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 392

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           ML KG+ P++  +   I    + G   +A  + E+M  KG  PD +T+  ++  LC++G 
Sbjct: 393 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 452

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY-T 597
           L++A      MV  G  P    Y  +I      G+L + ++L + M+ K + P  V Y +
Sbjct: 453 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 512

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
            +I+     GR+         M   G RPNV+T+N+L+ G C +  +++A+ L   M   
Sbjct: 513 SIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 572

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           GI PN Y Y  L++  C  G   +AL ++++ML + ++P    +S +L
Sbjct: 573 GIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIIL 620



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 143/546 (26%), Positives = 265/546 (48%), Gaps = 38/546 (6%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  + K   V++   +F +M+  G+LP +  CN IIK L       KA  + + M + G
Sbjct: 196 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 255

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS--------- 289
           I P + TY+ ++D  CK   M +A  +L +M   G  PN +TYN LI G+S         
Sbjct: 256 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 315

Query: 290 --------------------------RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGY 323
                                     ++G   +A+ +   M+  G K    SY+ ++ GY
Sbjct: 316 RVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGY 375

Query: 324 SEK--GLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           +      L +  N+   M+T+G+AP    +NILI    + G +  A   F +M  K +IP
Sbjct: 376 ATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIP 435

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           D +++ T++   CR G + +A   F+ +    + P+   Y  LI G C +G+L  A++L 
Sbjct: 436 DTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELI 495

Query: 442 ENMINQGILPDVITY-TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
             M+N+ I P  + Y + ++N  CK G ++  ++  + M++ G +P+   + + + G   
Sbjct: 496 SEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCL 555

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
           +G+  EA+ L + M + G  P+   Y  LV G CK G +++A  + R M+  G  P  + 
Sbjct: 556 VGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL 615

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           Y+ I+H   +       + +F+ M+  G + ++ TY V++         + A M   ++ 
Sbjct: 616 YSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLF 675

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
              ++ ++IT+N +I+ + ++ R  +A  LF  +   G++PN  TY+++I       +++
Sbjct: 676 AMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYE 735

Query: 681 EALRLY 686
           EA  L+
Sbjct: 736 EADNLF 741



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 141/511 (27%), Positives = 256/511 (50%), Gaps = 19/511 (3%)

Query: 93  LVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVC 152
           +++ L +++E  +      + V++  G+  D F +  I++ L +S  +  A  V+E +V 
Sbjct: 231 IIKELCKMKEMDKAESIVQKMVDS--GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMV- 287

Query: 153 VNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCN 212
                       G   + ++    + L+  Y+   M  + + VF +M   G++P V NCN
Sbjct: 288 ----------EAGTRPNSIT---YNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCN 334

Query: 213 RIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE--MQEALELLWEMQ 270
             I  L  +G + +A+ ++  M   G KP I++Y+TML  +    +  + +   +   M 
Sbjct: 335 SFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLML 394

Query: 271 GRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLV 330
            +G +PN   +N+LI  ++R G +++A  +  DM   G+     ++  +I      G L 
Sbjct: 395 TKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLD 454

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISY-NTL 389
           +AL+    MV  GV P+ A Y  LI G C  G +  A+    EM+ K++ P  + Y +++
Sbjct: 455 DALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSI 514

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
           +   C+ G + E   + D +      P VVT+N+L++G C  G++E A  L + M + GI
Sbjct: 515 INNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGI 574

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
            P+   Y  +V+G CK G +  A   F +ML KG++P    Y+  + G  +   T+ A +
Sbjct: 575 EPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKK 634

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           +  EM+  G    + TY V++ GLC+    +EAN LL K+       D IT+  +I A  
Sbjct: 635 MFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMF 694

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           ++G  +  ++LF+ +   GL P + TY+++I
Sbjct: 695 KVGRRQEAKELFDAISTYGLVPNIQTYSMMI 725



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 115/376 (30%), Positives = 204/376 (54%), Gaps = 3/376 (0%)

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
           R   PT+ TYNILI    +  R          +L+  + PD  SY +L+YG+ + G + +
Sbjct: 150 RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDK 208

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           A  LF E+  + ++P ++  N++I  LC+  +++ A+ + + M++ GI PD+ TY+++++
Sbjct: 209 AHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIID 268

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
           G CK   +  A     +M+  G +P+   Y + I G    G  +E+ R+ ++M + G  P
Sbjct: 269 GLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIP 328

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD--LRRGRD 579
            +   N  +H L K G   EA  +   MV  G  PD I+Y++++H      D  L    +
Sbjct: 329 TVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHN 388

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
           +FN ML KG++P    + +LI+A+A  G ++ A + F +MQ KG+ P+ +T+  +I+ LC
Sbjct: 389 IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLC 448

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
           R+ R+D A   F  M + G+ P++  Y  LI   CN G   +A  L  EM++++I P   
Sbjct: 449 RIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 508

Query: 700 THSALLLKQLDKDYKV 715
            + + ++  L K+ +V
Sbjct: 509 KYFSSIINNLCKEGRV 524



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 109/444 (24%), Positives = 200/444 (45%), Gaps = 5/444 (1%)

Query: 175 ILDLLLLIYTKKSMVEQCLL----VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV 230
           I+    +++   +  + CL     +FN ML  G+ P+    N +I      G   KA  +
Sbjct: 365 IISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLI 424

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
           +  M   G+ P  VT+ T++ S C+ G + +AL     M   G  P+   Y  LI G   
Sbjct: 425 FEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCN 484

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSY-NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           +GEL +A+ LI +M+   +      Y + II    ++G + E  ++ + MV  G  P + 
Sbjct: 485 HGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVV 544

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           T+N L+ G C  G + +A      M    + P+   Y TL+ GYC++G I +A  +F ++
Sbjct: 545 TFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDM 604

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
             + + PT V Y+ ++ GL +      A+++   MI  G    + TY +++ G C+    
Sbjct: 605 LHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCT 664

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A     ++    ++ D   +   I+   K+G   EA  L + +   G  P++ TY+++
Sbjct: 665 DEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMM 724

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           +  L K  S EEA+ L   +   G   D      I+   L   ++ +  +  + +    L
Sbjct: 725 ITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNL 784

Query: 590 SPTLVTYTVLIHAHAARGRLELAF 613
           +    T ++L    +  G ++  F
Sbjct: 785 TLEASTISLLASLFSREGMIKGLF 808



 Score = 40.8 bits (94), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 30/161 (18%), Positives = 75/161 (46%)

Query: 169 SCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR 228
           + VSI    ++L    + +  ++  ++  K+    +  D+   N +I  +   G   +A+
Sbjct: 644 TTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAK 703

Query: 229 EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
           E++  +  +G+ P+I TY+ M+ +  KE   +EA  L   ++  G + +    N ++   
Sbjct: 704 ELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRML 763

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLL 329
               E+ +A   +  + +  L + A + + +   +S +G++
Sbjct: 764 LNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMI 804


>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 185/706 (26%), Positives = 313/706 (44%), Gaps = 89/706 (12%)

Query: 82  HFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILI------ 135
            F+  +S+P L+V V+N ++  P   + FF W   Q G      V+  ++E+L       
Sbjct: 93  QFRGRLSEP-LVVEVMNLVKH-PEFCVEFFLWASRQIGYSHTPVVYNALIELLCCNAVNN 150

Query: 136 --------------ESGLLRSAYWVVETVVCVNMHGILDVLIG--GGLSSC---VSIKIL 176
                         +  LLR     +    C N  G+ +V +   G L       S    
Sbjct: 151 DRVSHKFLMQIRDDDRELLRKLLNFLIQKCCRN--GMWNVALEELGRLKDFGYKASPTTY 208

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           + L+ ++ +   ++   LV  +M  +G   D          L   G   +  +   ++ +
Sbjct: 209 NALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFAYSLCKAG---RCGDALSLLEK 265

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
               P  V YN M+   C+    QEA+++L  M+   C PN VTY +L++G    G+L +
Sbjct: 266 EEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGR 325

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
            + ++  M+  G   +   +N ++  Y +      A  L ++M+  G  P    YNI I 
Sbjct: 326 CKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIG 385

Query: 357 G-----------------------------------------LCKWGRVSDARHRFFEML 375
                                                     LC  G+   A     EM+
Sbjct: 386 SICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMM 445

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
            K  +PD  +Y+ ++   C +  + +AFLLF+E++   +VP+V TY  LID  C+ G ++
Sbjct: 446 SKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQ 505

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            A+   + M+     P+V+TYT +++   K   +  A + F  ML +G +P+   YT  I
Sbjct: 506 QARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALI 565

Query: 496 AGELKLGDTSEA----YRLQEEMLAKGF------------PPDLITYNVLVHGLCKLGSL 539
            G  K G   +A     R+Q ++ +                P++ITY  LV GLCK   +
Sbjct: 566 DGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRV 625

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           EEA+ELL  M  +G  P+ I Y ++I    + G L   +++F  M  +G  P L TY+ L
Sbjct: 626 EEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSL 685

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           I++     RL+L     S+M      PNV+ Y  +I+GLC++ + ++AY L + MEE G 
Sbjct: 686 INSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGC 745

Query: 660 LPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            PN  TYT +I+     G  ++ L LY++M  +   P++ T+  L+
Sbjct: 746 YPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLI 791



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 138/479 (28%), Positives = 241/479 (50%), Gaps = 18/479 (3%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A + Y  M + G+  + V  +      C  G+  +A E++ EM  +G  P+  TY+ +I 
Sbjct: 402 AEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIG 461

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
                 ++E+A  L  +M K G+  S ++Y  +I  + + GL+ +A N  +EM+     P
Sbjct: 462 FLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTP 521

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
            + TY  LI+   K  +V DA   F  ML +   P++++Y  L+ G+C++G I +A  ++
Sbjct: 522 NVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIY 581

Query: 407 ----DELRSRNL------------VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
                ++ S ++             P ++TY  L+DGLC+   +E A +L + M   G  
Sbjct: 582 ARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCE 641

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
           P+ I Y  +++G CK G L  A+E F +M  +G  P+ + Y++ I    K        ++
Sbjct: 642 PNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKV 701

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
             +ML     P+++ Y  ++ GLCK+G  EEA  L+ KM   G  P+ ITYT++I    +
Sbjct: 702 LSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGK 761

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
           +G + +  +L+ +M  KG +P  +TY VLI+   + G L+ A     EM+      ++ +
Sbjct: 762 IGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISS 821

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           Y  +I G    R    + GL  ++ E   +P +  Y ILI+    AG  + AL L +E+
Sbjct: 822 YRKIIEGF--NREFITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEI 878



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 154/542 (28%), Positives = 242/542 (44%), Gaps = 51/542 (9%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
            +++ML  G++ +  N +   + L   G   KA E+   M   G  P   TY+ ++   C
Sbjct: 405 AYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLC 464

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
              ++++A  L  EM+  G  P+  TY +LI  F + G ++QAR    +ML+     +  
Sbjct: 465 DASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVV 524

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +Y  +I  Y +   + +A  L E M+  G  P + TY  LI G CK G++  A   +  M
Sbjct: 525 TYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARM 584

Query: 375 --------------LRKN--VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
                         L  N    P+II+Y  L+ G C++  + EA  L D +      P  
Sbjct: 585 QGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQ 644

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           + Y+ LIDG C+ G LE AQ++   M  +G  P++ TY+ ++N   K   L +  +  ++
Sbjct: 645 IVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSK 704

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           ML     P+   YT  I G  K+G T EAYRL  +M   G  P++ITY  ++ G  K+G 
Sbjct: 705 MLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGK 764

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR------------ 586
           +E+  EL R M   G  P+ ITY  +I+     G L     L + M +            
Sbjct: 765 IEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRK 824

Query: 587 --KGLSPTLVT-------------------YTVLIHAHAARGRLELAFMYFSEMQVKG-- 623
             +G +   +T                   Y +LI      GRLE A     E+      
Sbjct: 825 IIEGFNREFITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEISSSPSL 884

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
              N   Y +LI  L    ++D+A+ L+  M  + ++P   T+  LI      G WQEAL
Sbjct: 885 AVANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEAL 944

Query: 684 RL 685
           +L
Sbjct: 945 QL 946



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 122/460 (26%), Positives = 210/460 (45%), Gaps = 20/460 (4%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           S+    +L+  + K  +++Q    F++MLR+   P+V     +I           A +++
Sbjct: 487 SVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLF 546

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG---------------RGC-S 275
            MM   G KP++VTY  ++D  CK G++ +A ++   MQG                 C +
Sbjct: 547 EMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCET 606

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           PN +TY  L+ G  +   +E+A  L+  M   G + +   Y+ +I G+ + G L  A  +
Sbjct: 607 PNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEV 666

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
             +M  RG  P L TY+ LI  L K  R+        +ML  +  P+++ Y  ++ G C+
Sbjct: 667 FVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCK 726

Query: 396 SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
            G   EA+ L  ++      P V+TY  +IDG  + G +E   +L  +M ++G  P+ IT
Sbjct: 727 VGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFIT 786

Query: 456 YTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML 515
           Y +++N  C  G L  A    +EM +        +Y   I G  +   TS    L +E+ 
Sbjct: 787 YRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFNREFITSIG--LLDELS 844

Query: 516 AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG--FIPDHITYTSIIHASLEMGD 573
                P    Y +L+    K G LE A  LL ++       + +   YTS+I +      
Sbjct: 845 ENESVPVESLYRILIDNFIKAGRLEGALNLLEEISSSPSLAVANKYLYTSLIESLSHASK 904

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
           + +  +L+ +M+ K + P L T+  LI      G+ + A 
Sbjct: 905 VDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEAL 944



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 134/265 (50%), Gaps = 10/265 (3%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM---GEFGIKP 241
           K+  ++  L V +KML N   P+V     +I  L   G   K  E YR+M    E G  P
Sbjct: 691 KEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVG---KTEEAYRLMLKMEEVGCYP 747

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
           +++TY  M+D F K G++++ LEL  +M  +GC+PN +TY VLI      G L++A  L+
Sbjct: 748 NVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLL 807

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
            +M +        SY  II G++ +   + ++ L +E+      P  + Y ILI    K 
Sbjct: 808 DEMKQTYWPRHISSYRKIIEGFNRE--FITSIGLLDELSENESVPVESLYRILIDNFIKA 865

Query: 362 GRVSDARHRFFEMLRKN--VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
           GR+  A +   E+       + +   Y +L+     +  + +AF L+  + ++N+VP + 
Sbjct: 866 GRLEGALNLLEEISSSPSLAVANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPELS 925

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENM 444
           T+  LI GL R G  + A QL +++
Sbjct: 926 TFVHLIKGLTRVGKWQEALQLSDSI 950


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 145/441 (32%), Positives = 233/441 (52%), Gaps = 16/441 (3%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A   +  + + G  P++VT+NT+L   C E  + EAL+L  +M    C PN VT+  L+ 
Sbjct: 34  ALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM----CKPNVVTFTTLMN 89

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG-VA 345
           G  R G + +A  L+  M++ GL+ +  +Y  I+ G  + G  V ALNL  +M     + 
Sbjct: 90  GLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIK 149

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P +  Y+ +I GL K GR +DA++ F EM  K + PDI++Y+ ++ G+C SG   EA  L
Sbjct: 150 PDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRL 209

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
             E+  R + P VVT++ LI+ L + GDL  AQ L + MI+ G+ P+V+T   +++G C 
Sbjct: 210 LQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCD 269

Query: 466 MGNLSMAREFFNEMLRK-----------GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
            G L  A E F  M +            G++PD   Y   I+G +  G   EA  L EEM
Sbjct: 270 SGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 329

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
             +G  PD +TY+ +++GLCK   L+EA ++   M    F P+ +T+ ++I    + G +
Sbjct: 330 PHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMV 389

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
             G +LF  M R+G+    +TY  LI      G +  +   F EM   G+ P+ IT   +
Sbjct: 390 DDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNM 449

Query: 635 INGLCRLRRIDQAYGLFIDME 655
           + GL     + +A  +  +++
Sbjct: 450 LTGLWSKEELKKALAMLEELQ 470



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 142/462 (30%), Positives = 230/462 (49%), Gaps = 16/462 (3%)

Query: 280 TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
           ++N+LI  F    +L  A      + KLG   +  ++N ++ G   +  + EAL+L  +M
Sbjct: 17  SFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM 76

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
                 P + T+  L+ GLC+ GRV +A      M+   + P+ I+Y T++ G C+ G+ 
Sbjct: 77  C----KPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDT 132

Query: 400 GEAFLLFDELRS-RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
             A  L  ++    ++ P VV Y+ +IDGL + G    AQ L   M ++GI PD++TY+ 
Sbjct: 133 VSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSC 192

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           M+NG C  G  S A+    EML + + PD   ++  I   +K GD + A  L +EM++ G
Sbjct: 193 MINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSG 252

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKM-----------VGDGFIPDHITYTSIIHA 567
             P+++T N L+ GLC  G L++A E+ + M             +G  PD  TY  +I  
Sbjct: 253 VCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISG 312

Query: 568 SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
            +  G      +L+  M  +G+ P  VTY+ +I+    + RL+ A   F  M  K   PN
Sbjct: 313 LINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPN 372

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYK 687
           ++T+N LI G C+   +D    LF +M   GI+ N  TY  LI      GN   +L +++
Sbjct: 373 IVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQ 432

Query: 688 EMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLGAE 729
           EM+   + PD  T   +L     K+    A+  LE L +  +
Sbjct: 433 EMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQMSMD 474



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 139/472 (29%), Positives = 244/472 (51%), Gaps = 16/472 (3%)

Query: 163 IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG 222
           I  GL     I   ++L+  +   S +   L  F K+ + G  P +   N ++  L    
Sbjct: 5   IKHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVED 64

Query: 223 FSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYN 282
              +A +++  M     KP++VT+ T+++  C+EG + EA+ LL  M   G  PN +TY 
Sbjct: 65  RVSEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG 120

Query: 283 VLITGFSRNGELEQARGLIRDMLKLG-LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
            ++ G  + G+   A  L+R M +L  +K     Y+ II G  + G   +A NL  EM  
Sbjct: 121 TIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQD 180

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
           +G+ P + TY+ +I G C  G+ S+A+    EML + + PD+++++ L+    + G++  
Sbjct: 181 KGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNS 240

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL----EVAQQLKENMIN-------QGIL 450
           A  L  E+ S  + P VVT NTL+DGLC  G L    E+ + ++++M++        G+ 
Sbjct: 241 AQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVE 300

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
           PDV TY I+++G    G    A E + EM  +G+ PD   Y++ I G  K     EA ++
Sbjct: 301 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQM 360

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
            + M +K F P+++T+N L+ G CK G +++  EL  +M   G + + ITY ++I    +
Sbjct: 361 FDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRK 420

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
           +G++    D+F  M+  G+ P  +T   ++    ++  L+ A     E+Q+ 
Sbjct: 421 VGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQMS 472


>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1107

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 160/547 (29%), Positives = 276/547 (50%), Gaps = 9/547 (1%)

Query: 168 SSCVSIKILDLLLLIYTKKSMVEQCLL------VFNKM--LRNGLLPDVKNCNRIIKVLR 219
           S C+   IL    + Y   S++++ +L      VF+ +   RN  +P     + +  VL 
Sbjct: 12  SYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLI 71

Query: 220 DNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGV 279
           D G   +A + +  M  F + P   + N +L  F K G+  +      +M G G  P   
Sbjct: 72  DLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVF 131

Query: 280 TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
           TYN++I    + G++E ARGL  +M   GL     +YN +I G+ + G L + +   EEM
Sbjct: 132 TYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM 191

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
                 P + TYN LI   CK+G++      + EM    + P+++SY+TL+  +C+ G +
Sbjct: 192 KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMM 251

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
            +A   + ++R   LVP   TY +LID  C+ G+L  A +L   M+  G+  +V+TYT +
Sbjct: 252 QQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTAL 311

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           ++G C    +  A E F +M   G+ P+  +Y   I G +K  +   A  L  E+  +G 
Sbjct: 312 IDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI 371

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
            PDL+ Y   + GLC L  +E A  ++ +M   G   + + YT+++ A  + G+   G  
Sbjct: 372 KPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLH 431

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK-GIRPNVITYNALINGL 638
           L + M    +  T+VT+ VLI        +  A  YF+ +    G++ N   + A+I+GL
Sbjct: 432 LLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGL 491

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
           C+  +++ A  LF  M ++G++P++  YT L++ N   GN  EAL L  +M +  ++ D 
Sbjct: 492 CKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDL 551

Query: 699 CTHSALL 705
             +++L+
Sbjct: 552 LAYTSLV 558



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 156/616 (25%), Positives = 284/616 (46%), Gaps = 37/616 (6%)

Query: 116 TQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMH-GILDVLIGGGLSSCVSIK 174
           T+ G K     +C +  IL  + +   A  V++ +V       + DVL            
Sbjct: 2   TRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFG 61

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           + D L  +     M+E+ +  F+KM R  + P  ++CN ++      G +   +  ++ M
Sbjct: 62  VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM 121

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
              G +P++ TYN M+D  CKEG+++ A  L  EM+ RG  P+ VTYN +I GF + G L
Sbjct: 122 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRL 181

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           +       +M  +  +    +YN +I  + + G L   L    EM   G+ P + +Y+ L
Sbjct: 182 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTL 241

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           +   CK G +  A   + +M R  ++P+  +Y +L+   C+ GN+ +AF L +E+    +
Sbjct: 242 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 301

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
              VVTY  LIDGLC    ++ A++L   M   G++P++ +Y  +++G  K  N+  A E
Sbjct: 302 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALE 361

Query: 475 FFNEMLRKGLQPD-----------------------------------RFAYTTQIAGEL 499
             NE+  +G++PD                                      YTT +    
Sbjct: 362 LLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF 421

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD-GFIPDH 558
           K G+ +E   L +EM        ++T+ VL+ GLCK   + +A +   ++  D G   + 
Sbjct: 422 KSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANA 481

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
             +T++I    +   +     LF  M++KGL P    YT L+  +  +G +  A     +
Sbjct: 482 AIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDK 541

Query: 619 MQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGN 678
           M   G++ +++ Y +L+ GL    ++ +A     +M  EGI P++     ++ ++   G 
Sbjct: 542 MAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGC 601

Query: 679 WQEALRLYKEMLDREI 694
             EA+ L   ++  ++
Sbjct: 602 IDEAVELQSYLMKHQL 617



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 15/207 (7%)

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV-----GDGF----------IPDH 558
           M   GF   + +Y ++ H L       +AN +L++MV      D F          +P  
Sbjct: 1   MTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGF 60

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
             + ++    +++G L      F+ M R  + P   +   L+H  A  G+ +    +F +
Sbjct: 61  GVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKD 120

Query: 619 MQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGN 678
           M   G RP V TYN +I+ +C+   ++ A GLF +M+  G++P+  TY  +I+     G 
Sbjct: 121 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 180

Query: 679 WQEALRLYKEMLDREIEPDYCTHSALL 705
             + +  ++EM D   EPD  T++AL+
Sbjct: 181 LDDTVCFFEEMKDMCCEPDVITYNALI 207


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 161/553 (29%), Positives = 265/553 (47%), Gaps = 44/553 (7%)

Query: 212 NRIIKVLRDNGFSVKAREVY-RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM- 269
           N+++K L D     +A +V  + M E G  P  V+Y+ +L  FC E   +EALELL  M 
Sbjct: 137 NQLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMA 196

Query: 270 --QGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKG 327
              GR C PN VTY  +I G  +    ++A G+ + M+  G+K +  +YN +I GY   G
Sbjct: 197 NDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIG 256

Query: 328 LLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI-PDIISY 386
              E + + E+M  RG+ P   TY  L+  LC    +    H F +++ +N + PD   +
Sbjct: 257 KWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEM----HSFLDLMVENGLSPDHHIF 312

Query: 387 NTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMIN 446
           N     Y + G I +A  +F+++R   L P VV Y  LID LC+ G ++ A+     MIN
Sbjct: 313 NIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMIN 372

Query: 447 QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL---------------------- 484
           +G+ P+++ +  +V G C +     A E   EML +G+                      
Sbjct: 373 EGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVME 432

Query: 485 -------------QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
                        +PD F+YT  I+G    G T EA ++ + M++ G  P  +TYN L+H
Sbjct: 433 GRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLH 492

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           G C    +++A  L R+M+  G  P  +TY +I+H   +       ++L+ NM+  G   
Sbjct: 493 GYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKC 552

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
            + TY ++++       ++ AF  F  +  KG++ N+IT+  +I  L +  R + A  LF
Sbjct: 553 DIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLF 612

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDK 711
             +   G++PN  TY ++       G+ +E   L+  M      P+    +AL+ + L +
Sbjct: 613 AAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHR 672

Query: 712 DYKVHAVEYLESL 724
                A  YL  L
Sbjct: 673 GDISRAGAYLSKL 685



 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 166/580 (28%), Positives = 269/580 (46%), Gaps = 35/580 (6%)

Query: 173 IKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR 232
           I I  LL  +   K + E   ++  +M   G  PD  + + ++K   +   + +A E+ R
Sbjct: 134 IVINQLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLR 193

Query: 233 MMGE---FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           MM         P++VTY T++D  CK      A  +  +M   G  PN  TYN LI G+ 
Sbjct: 194 MMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYL 253

Query: 290 RNGELEQ---------ARGLIRD-----------------------MLKLGLKVSAHSYN 317
             G+ ++         ARGL  D                       M++ GL    H +N
Sbjct: 254 SIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFN 313

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
                Y++ G++ +A+++  +M   G++P +  Y  LI  LCK GRV DA  +F +M+ +
Sbjct: 314 IFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINE 373

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
            V P+I+ +N+L+YG C       A  L  E+  + + P  V +NTLI  LC  G +   
Sbjct: 374 GVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEG 433

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
           ++L + M + G+ PD  +YT +++G C  G    A + F+ M+  GL P    Y T + G
Sbjct: 434 RRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHG 493

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
                   +AY L  EML KG  P ++TYN ++HGL +     EA EL   M+  G   D
Sbjct: 494 YCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCD 553

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
             TY  I++   +   +     +F ++  KGL   ++T+T++I A    GR E A   F+
Sbjct: 554 IYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFA 613

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
            +   G+ PNV+TY  +   L     +++   LF  ME+ G  PN      L+    + G
Sbjct: 614 AIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRG 673

Query: 678 NWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHA 717
           +   A     ++ +R    +  T S L+      +Y+ HA
Sbjct: 674 DISRAGAYLSKLDERNFSVEASTTSLLISIFTSDEYQHHA 713



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 146/547 (26%), Positives = 245/547 (44%), Gaps = 81/547 (14%)

Query: 232 RMMGEFGIK--PSIVTYNTMLDSFCKEGEMQ----------------------------- 260
           RM+ E  IK  P+  TY+ ++   C+ G ++                             
Sbjct: 85  RMVRECSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLC 144

Query: 261 ------EALE-LLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ----------------- 296
                 EA++ LL  M   GC+P+ V+Y++L+ GF      E+                 
Sbjct: 145 DGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCP 204

Query: 297 ---------------------ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
                                A G+ + M+  G+K +  +YN +I GY   G   E + +
Sbjct: 205 PNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQM 264

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI-PDIISYNTLLYGYC 394
            E+M  RG+ P   TY  L+  LC    +    H F +++ +N + PD   +N     Y 
Sbjct: 265 LEKMSARGLKPDCYTYGSLLNYLCALSEM----HSFLDLMVENGLSPDHHIFNIFFSAYA 320

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
           + G I +A  +F+++R   L P VV Y  LID LC+ G ++ A+     MIN+G+ P+++
Sbjct: 321 KCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIV 380

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
            +  +V G C +     A E   EML +G+ P+   + T I     +G   E  RL + M
Sbjct: 381 VFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLM 440

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
              G  PD  +Y  L+ G C  G  +EA ++   MV  G  P  +TY +++H       +
Sbjct: 441 EHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRI 500

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
                LF  MLRKG++P +VTY  ++H      R   A   +  M   G + ++ TYN +
Sbjct: 501 DDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNII 560

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           +NGLC+   +D+A+ +F  +  +G+  N  T+TI+I      G  ++A+ L+  +    +
Sbjct: 561 LNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGL 620

Query: 695 EPDYCTH 701
            P+  T+
Sbjct: 621 VPNVVTY 627



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 132/446 (29%), Positives = 221/446 (49%), Gaps = 37/446 (8%)

Query: 155 MHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRI 214
           MH  LD+++  GLS      I ++    Y K  M+++ + +FNKM ++GL P+V N   +
Sbjct: 293 MHSFLDLMVENGLSP--DHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGAL 350

Query: 215 IKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGC 274
           I  L   G    A   +  M   G+ P+IV +N+++   C   + + A EL++EM  +G 
Sbjct: 351 IDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGI 410

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
            PN V +N LI      G + + R LI  M  +G++  A SY P+I GY   G   EA  
Sbjct: 411 CPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEK 470

Query: 335 LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
           + + MV+ G++PT  TYN L++G C   R+ DA   F EMLRK V P +++YNT+L+G  
Sbjct: 471 VFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLF 530

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
           ++    EA  L+  + +      + TYN +++GLC+   ++ A ++ +++ ++G+  ++I
Sbjct: 531 QTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNII 590

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
           T+TIM+    K G             RK    D FA                       +
Sbjct: 591 TFTIMIGALLKGG-------------RKEDAMDLFA----------------------AI 615

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
            A G  P+++TY ++   L + GSLEE + L   M  +G  P+     +++   L  GD+
Sbjct: 616 PANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDI 675

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLI 600
            R     + +  +  S    T ++LI
Sbjct: 676 SRAGAYLSKLDERNFSVEASTTSLLI 701



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 121/366 (33%), Positives = 188/366 (51%), Gaps = 7/366 (1%)

Query: 344 VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF 403
           VAP   TY+ILI  LC+ GR+  +   F  +L+     + I  N LL G C    +GEA 
Sbjct: 94  VAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAM 153

Query: 404 -LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMIN---QGILPDVITYTIM 459
            +L   +      P  V+Y+ L+ G C     E A +L   M N   +   P+V+TYT +
Sbjct: 154 DVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTV 213

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           ++G CK      A   F +M+  G++P+   Y   I G L +G   E  ++ E+M A+G 
Sbjct: 214 IDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGL 273

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
            PD  TY  L++ LC   +L E +  L  MV +G  PDH  +     A  + G + +  D
Sbjct: 274 KPDCYTYGSLLNYLC---ALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMD 330

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
           +FN M + GLSP +V Y  LI A    GR++ A + F++M  +G+ PN++ +N+L+ GLC
Sbjct: 331 IFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLC 390

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
            + + ++A  L  +M ++GI PN   +  LI   CN G   E  RL   M    + PD  
Sbjct: 391 TVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAF 450

Query: 700 THSALL 705
           +++ L+
Sbjct: 451 SYTPLI 456



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/521 (25%), Positives = 232/521 (44%), Gaps = 71/521 (13%)

Query: 275 SPNGVTYNVLITGFSRNGELEQARG----------------------------------- 299
           +PN  TY++LI    R G L+ +                                     
Sbjct: 95  APNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAMD 154

Query: 300 -LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT---RGVAPTLATYNILI 355
            L++ M +LG      SY+ ++ G+  +    EAL L   M     R   P + TY  +I
Sbjct: 155 VLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVI 214

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
            GLCK      A   F +M+   V P+  +YN L++GY   G   E   + +++ +R L 
Sbjct: 215 DGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLK 274

Query: 416 PTVVTYNTLIDGLC--------------------------------RYGDLEVAQQLKEN 443
           P   TY +L++ LC                                + G ++ A  +   
Sbjct: 275 PDCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNK 334

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           M   G+ P+V+ Y  +++  CK+G +  A   FN+M+ +G+ P+   + + + G   +  
Sbjct: 335 MRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDK 394

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
              A  L  EML +G  P+ + +N L+  LC +G + E   L+  M   G  PD  +YT 
Sbjct: 395 WERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTP 454

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           +I      G       +F+ M+  GLSPT VTY  L+H + +  R++ A+  F EM  KG
Sbjct: 455 LISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKG 514

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
           + P V+TYN +++GL + +R  +A  L+++M   G   + YTY I++N  C +    EA 
Sbjct: 515 VTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAF 574

Query: 684 RLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           ++++ +  + ++ +  T + ++   L    K  A++   ++
Sbjct: 575 KMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAI 615



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 109/260 (41%), Gaps = 21/260 (8%)

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           L+ +R       +G L L D   A +L +E+L    P  ++ +N +++ + +        
Sbjct: 13  LELERIIAARARSGSLGLDD---ALKLFDELLIHARPASVVAFNQILNAVSRASRASGRR 69

Query: 544 -----------ELLRKMVGDGFI---PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
                       L  +MV +  I   P+  TY+ +I     MG L+     F  +L+ G 
Sbjct: 70  SSSTSESELVVSLFNRMVRECSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGW 129

Query: 590 SPTLVTYTVLIHAHAARGRL-ELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
               +    L+       R+ E   +    M   G  P+ ++Y+ L+ G C   R ++A 
Sbjct: 130 RVNDIVINQLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEAL 189

Query: 649 GLFIDMEEE---GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            L   M  +      PN  TYT +I+  C A  +  A  ++++M+D  ++P+  T++ L+
Sbjct: 190 ELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLI 249

Query: 706 LKQLDKDYKVHAVEYLESLT 725
              L        V+ LE ++
Sbjct: 250 HGYLSIGKWKEVVQMLEKMS 269



 Score = 48.1 bits (113), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 32/154 (20%), Positives = 69/154 (44%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K + V++   +F  +   GL  ++     +I  L   G    A +++  +   G+ P++V
Sbjct: 566 KSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVV 625

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY  + ++  +EG ++E   L   M+  G +PN    N L+      G++ +A   +  +
Sbjct: 626 TYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKL 685

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
            +    V A + + +I  ++       A +L E+
Sbjct: 686 DERNFSVEASTTSLLISIFTSDEYQHHAKSLPEK 719


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 145/441 (32%), Positives = 233/441 (52%), Gaps = 16/441 (3%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A   +  + + G  P++VT+NT+L   C E  + EAL+L  +M    C PN VT+  L+ 
Sbjct: 34  ALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM----CKPNVVTFTTLMN 89

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG-VA 345
           G  R G + +A  L+  M++ GL+ +  +Y  I+ G  + G  V ALNL  +M     + 
Sbjct: 90  GLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIK 149

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P +  Y+ +I GL K GR +DA++ F EM  K + PDI++Y+ ++ G+C SG   EA  L
Sbjct: 150 PDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRL 209

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
             E+  R + P VVT++ LI+ L + GDL  AQ L + MI+ G+ P+V+T   +++G C 
Sbjct: 210 LQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCD 269

Query: 466 MGNLSMAREFFNEMLRK-----------GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
            G L  A E F  M +            G++PD   Y   I+G +  G   EA  L EEM
Sbjct: 270 SGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 329

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
             +G  PD +TY+ +++GLCK   L+EA ++   M    F P+ +T+ ++I    + G +
Sbjct: 330 PHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMV 389

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
             G +LF  M R+G+    +TY  LI      G +  +   F EM   G+ P+ IT   +
Sbjct: 390 DDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNM 449

Query: 635 INGLCRLRRIDQAYGLFIDME 655
           + GL     + +A  +  +++
Sbjct: 450 LTGLWSKEELKRALAMLEELQ 470



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 142/462 (30%), Positives = 230/462 (49%), Gaps = 16/462 (3%)

Query: 280 TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
           ++N+LI  F    +L  A      + KLG   +  ++N ++ G   +  + EAL+L  +M
Sbjct: 17  SFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM 76

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
                 P + T+  L+ GLC+ GRV +A      M+   + P+ I+Y T++ G C+ G+ 
Sbjct: 77  C----KPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDT 132

Query: 400 GEAFLLFDELRS-RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
             A  L  ++    ++ P VV Y+ +IDGL + G    AQ L   M ++GI PD++TY+ 
Sbjct: 133 VSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSC 192

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           M+NG C  G  S A+    EML + + PD   ++  I   +K GD + A  L +EM++ G
Sbjct: 193 MINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSG 252

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKM-----------VGDGFIPDHITYTSIIHA 567
             P+++T N L+ GLC  G L++A E+ + M             +G  PD  TY  +I  
Sbjct: 253 VCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISG 312

Query: 568 SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
            +  G      +L+  M  +G+ P  VTY+ +I+    + RL+ A   F  M  K   PN
Sbjct: 313 LINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPN 372

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYK 687
           ++T+N LI G C+   +D    LF +M   GI+ N  TY  LI      GN   +L +++
Sbjct: 373 IVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQ 432

Query: 688 EMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLGAE 729
           EM+   + PD  T   +L     K+    A+  LE L +  +
Sbjct: 433 EMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQMSMD 474



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 139/472 (29%), Positives = 244/472 (51%), Gaps = 16/472 (3%)

Query: 163 IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG 222
           I  GL     I   ++L+  +   S +   L  F K+ + G  P +   N ++  L    
Sbjct: 5   IKHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVED 64

Query: 223 FSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYN 282
              +A +++  M     KP++VT+ T+++  C+EG + EA+ LL  M   G  PN +TY 
Sbjct: 65  RVSEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG 120

Query: 283 VLITGFSRNGELEQARGLIRDMLKLG-LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
            ++ G  + G+   A  L+R M +L  +K     Y+ II G  + G   +A NL  EM  
Sbjct: 121 TIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQD 180

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
           +G+ P + TY+ +I G C  G+ S+A+    EML + + PD+++++ L+    + G++  
Sbjct: 181 KGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNS 240

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL----EVAQQLKENMIN-------QGIL 450
           A  L  E+ S  + P VVT NTL+DGLC  G L    E+ + ++++M++        G+ 
Sbjct: 241 AQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVE 300

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
           PDV TY I+++G    G    A E + EM  +G+ PD   Y++ I G  K     EA ++
Sbjct: 301 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQM 360

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
            + M +K F P+++T+N L+ G CK G +++  EL  +M   G + + ITY ++I    +
Sbjct: 361 FDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRK 420

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
           +G++    D+F  M+  G+ P  +T   ++    ++  L+ A     E+Q+ 
Sbjct: 421 VGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQMS 472


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 144/475 (30%), Positives = 244/475 (51%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +   L  FN M+    LP +     +   L           + + M   GI   +++   
Sbjct: 72  INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTI 131

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++ FC+   +     +L ++   G  PN +T++ LI GF   G++ +A  L   M+  G
Sbjct: 132 LINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARG 191

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            K + HSY+ II G    G   E + L E M   G  P +  YN ++  LCK   V++A 
Sbjct: 192 YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAV 251

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
           H F +M    ++P +++Y +L++G    G   EAF L +E++  N++P +V ++ LID +
Sbjct: 252 HIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIM 311

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G++  A+ + + M   G+ PDV TY  ++NG C    +  AR+ F  M+ KG  PD 
Sbjct: 312 CKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDV 371

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
           F+++  + G  K     EA +L +EM  +G  PD ++YN L+ GLC+     EA EL + 
Sbjct: 372 FSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKD 431

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M  +G+ P+ +TY+ ++    + G L +   LF  M   GL P LVTY ++I      G+
Sbjct: 432 MHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGK 491

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
            + A   F+E+ VKG++PN       I+G+C+   +D+A+  F  ME++   P +
Sbjct: 492 FKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSPAQ 546



 Score =  252 bits (644), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 133/456 (29%), Positives = 247/456 (54%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PSIV +  +  +  +    +  + L  +M+  G S + ++  +LI  F R   ++    +
Sbjct: 89  PSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSV 148

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  ++KLGL+ +  +++ +I G+  +G +  A+ L + MV RG  P + +Y+I+I GLC+
Sbjct: 149 LGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCR 208

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G+ ++       M      PD++ YNT++   C+   + EA  +F +++   ++PTVVT
Sbjct: 209 VGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVT 268

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y +LI GL   G  + A  L   M    I+PD++ ++++++  CK G +S AR     M 
Sbjct: 269 YTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMT 328

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
             G++PD   Y T + G     +  EA ++ E M++KG  PD+ ++++LV+G CK   ++
Sbjct: 329 EMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRID 388

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA +L  +M   G IPD ++Y ++I    +        +LF +M   G  P LVTY++L+
Sbjct: 389 EAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILL 448

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
              + +G L+ A   F  M+  G++P+++TYN +I+G+C+  +   A  LF ++  +G+ 
Sbjct: 449 DCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQ 508

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
           PN +  T  I+  C  G   EA + +++M   +  P
Sbjct: 509 PNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSP 544



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 117/373 (31%), Positives = 202/373 (54%)

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
           ++L ++M   G++  + +  ILI   C+   V        ++++  + P++I+++TL+ G
Sbjct: 111 VSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLING 170

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
           +C  G IG A  LFD + +R   P V +Y+ +I GLCR G      +L E+M   G  PD
Sbjct: 171 FCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPD 230

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
           V+ Y  +V+  CK   ++ A   F +M   G+ P    YT+ I G   LG   EA+ L  
Sbjct: 231 VVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLN 290

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           EM      PDL+ ++VL+  +CK G + EA  +L+ M   G  PD  TY ++++      
Sbjct: 291 EMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRM 350

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
           ++   R +F  M+ KG  P + ++++L++ +    R++ A   F EM  +G+ P+ ++YN
Sbjct: 351 EVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYN 410

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
            LI+GLC+ RR  +A  LF DM   G  PN  TY+IL++     G   +A+ L++ M + 
Sbjct: 411 TLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENS 470

Query: 693 EIEPDYCTHSALL 705
            ++PD  T++ ++
Sbjct: 471 GLKPDLVTYNIMI 483



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 175/342 (51%)

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           ++DA   F  M+  N +P I+ +  L     R  +      L  ++    +   V++   
Sbjct: 72  INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTI 131

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           LI+  CR   ++    +   +I  G+ P+VIT++ ++NG C  G +  A E F+ M+ +G
Sbjct: 132 LINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARG 191

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
            +P+  +Y+  I G  ++G T+E  +L E M   G  PD++ YN +V  LCK   + EA 
Sbjct: 192 YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAV 251

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
            +  KM G G +P  +TYTS+IH    +G  +    L N M    + P LV ++VLI   
Sbjct: 252 HIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIM 311

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
              G +  A +    M   G+ P+V TYN L+NG C    + +A  +F  M  +G +P+ 
Sbjct: 312 CKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDV 371

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           ++++IL+N  C A    EA +L+ EM  R + PD  +++ L+
Sbjct: 372 FSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLI 413



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 119/238 (50%)

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
           N++ A   FN M+     P    +    +  +++        L ++M   G   D+++  
Sbjct: 71  NINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLT 130

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
           +L++  C+L  ++    +L K++  G  P+ IT++++I+     G + R  +LF+ M+ +
Sbjct: 131 ILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVAR 190

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
           G  P + +Y+++I      G+          M+V G  P+V+ YN +++ LC+ R +++A
Sbjct: 191 GYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEA 250

Query: 648 YGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             +F  M+  GILP   TYT LI+   N G W+EA  L  EM    I PD    S L+
Sbjct: 251 VHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLI 308



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 87/170 (51%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K   +++   +F++M   GL+PD  + N +I  L      ++A E+++ M   G  P+
Sbjct: 381 YCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPN 440

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +VTY+ +LD   K+G + +A+ L   M+  G  P+ VTYN++I G  + G+ + AR L  
Sbjct: 441 LVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFA 500

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
           ++   GL+ +     P I G  + GLL EA     +M     +P     N
Sbjct: 501 ELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSPAQGCIN 550


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 151/485 (31%), Positives = 251/485 (51%), Gaps = 4/485 (0%)

Query: 190 EQCLLVFNKML----RNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVT 245
           +Q L + + M+    R G  PDV +   +I  L   G   KA  ++  M + G+ P+ +T
Sbjct: 184 QQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCIT 243

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           YN +L  +C  G+ +EA+ +  +M   G  P+ VTYN L+    +NG   +AR +   M+
Sbjct: 244 YNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMV 303

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
           K G K  +  Y  ++ GY+ +G LV+   L + MV  G  P    +NILI    K G V 
Sbjct: 304 KKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVD 363

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
           +A   F +M ++ + P+I++Y T++   CR G + +A   FD L S  L P  V + TLI
Sbjct: 364 EAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLI 423

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
            GLC     + A++L   MI +GI P+ I +  ++N  CK G ++ A+  F+ M+R  +Q
Sbjct: 424 HGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQ 483

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
            D   YTT I G    G   EA +L E M+  G  P+ +TYN +++G CK G +E+A  L
Sbjct: 484 CDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSL 543

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
            R+M   G  P  + Y++I+H   +   +   ++L+  M++ G+   + TY +++     
Sbjct: 544 FRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQ 603

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
               + A   F  + +        T+N +I+ L +  R D+A  LF  +   G++PN  T
Sbjct: 604 NNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVT 663

Query: 666 YTILI 670
           Y +++
Sbjct: 664 YWLMM 668



 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 161/566 (28%), Positives = 268/566 (47%), Gaps = 41/566 (7%)

Query: 184 TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV-YRMMGEFGIKPS 242
           ++   ++       +++R G        + ++K L  +  +  A ++  R M   G  P+
Sbjct: 107 SRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPN 166

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGR----GCSPNGVTYNVLITGFSRNGELEQAR 298
             +YN +L   C E   Q+AL LL  M       GC P+ V+Y  +I G  R G+L++A 
Sbjct: 167 AFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAY 226

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L  +ML  G+  +  +YN ++ GY   G   EA+ +  +M   GV P + TYN L+  L
Sbjct: 227 CLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYL 286

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG-------------------------- 392
           CK GR  +AR  F  M++K   PD   Y TLL+G                          
Sbjct: 287 CKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDH 346

Query: 393 ---------YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
                    Y + G + EA L F ++R + L P +VTY T++D LCR G ++ A    + 
Sbjct: 347 YIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDR 406

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           +I++G+ P+ + +  +++G C       A E   EM+ +G+ P+   + T +    K G 
Sbjct: 407 LISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGM 466

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
            + A  + + M+      D+ITY  L+ G C  G ++EA +LL  MV DG  P+ +TY +
Sbjct: 467 VTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNT 526

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           II+   + G +     LF  M  KG++P +V Y+ ++H      R+  A   +  M   G
Sbjct: 527 IINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCG 586

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
           I+  + TYN ++ GLC+    D A  +F ++          T+ I+I+     G   EA 
Sbjct: 587 IKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAK 646

Query: 684 RLYKEMLDREIEPDYCTHSALLLKQL 709
            L+  +L R + P+  T+  L++K L
Sbjct: 647 DLFASLLARGLVPNVVTY-WLMMKSL 671



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 131/471 (27%), Positives = 238/471 (50%), Gaps = 5/471 (1%)

Query: 240 KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
           +  + TY+ ++    + G +  A   L  +   G +   +T++ L+ G   +     A  
Sbjct: 93  RADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMD 152

Query: 300 L-IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV---TR-GVAPTLATYNIL 354
           + +R M  LG   +A SYN ++ G  ++    +AL+L   M+   TR G  P + +Y  +
Sbjct: 153 IALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTV 212

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           I GL + G++  A   F EML + + P+ I+YN LL+GYC SG   EA  +F ++    +
Sbjct: 213 INGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGV 272

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P VVTYNTL+  LC+ G    A+++ ++M+ +G  PD   Y  +++G    G L    +
Sbjct: 273 EPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQ 332

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
             + M+R G QPD + +   I    K G   EA     +M  +G  P+++TY  ++  LC
Sbjct: 333 LLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALC 392

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           ++G +++A     +++ +G  P+ + + ++IH         +  +L   M+ +G+ P  +
Sbjct: 393 RVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTI 452

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
            +  L++     G +  A   F  M    ++ +VITY  LI+G C   ++D+A  L   M
Sbjct: 453 FFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGM 512

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             +G+ PN+ TY  +IN  C  G  ++A  L+++M  + + P    +S +L
Sbjct: 513 VLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTIL 563



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 149/544 (27%), Positives = 271/544 (49%), Gaps = 17/544 (3%)

Query: 115 ETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLS-SCVSI 173
           +T+ G   D   + T++  L+  G L  AY             + D ++  G+S +C++ 
Sbjct: 197 DTRGGCPPDVVSYTTVINGLLREGQLDKAYC------------LFDEMLDQGMSPNCIT- 243

Query: 174 KILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRM 233
              + LL  Y      ++ + +F KM R+G+ PDV   N ++  L  NG S++AR+V+  
Sbjct: 244 --YNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDS 301

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M + G KP    Y T+L  +  EG + +  +LL  M   G  P+   +N+LI  ++++G 
Sbjct: 302 MVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGM 361

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           +++A      M + GL  +  +Y  ++      G + +A++  + +++ G+ P    +  
Sbjct: 362 VDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRT 421

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           LI+GLC   +   A     EM+ + + P+ I +NTLL   C+ G +  A  +FD +   +
Sbjct: 422 LIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVD 481

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           +   V+TY TLIDG C  G ++ A +L E M+  G+ P+ +TY  ++NG CK G +  A 
Sbjct: 482 VQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDAC 541

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
             F +M  KG+ P    Y+T + G  +    + A  L   M+  G    + TYN+++ GL
Sbjct: 542 SLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGL 601

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
           C+    ++A  +   +    F   + T+  +I A L+ G     +DLF ++L +GL P +
Sbjct: 602 CQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNV 661

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
           VTY +++ +   +G LE     F  ++  G   +    NAL+  L +   + +A G+++ 
Sbjct: 662 VTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLPQKGEVRKA-GVYLS 720

Query: 654 MEEE 657
             +E
Sbjct: 721 KIDE 724



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 149/303 (49%), Gaps = 11/303 (3%)

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
            A  LFDEL  R+   ++   N+ +  + R      +  +  ++ N+    D+ TY+I++
Sbjct: 50  HAHHLFDELLRRD-TTSIFDLNSALSAVARE-----SPAVALSLFNRMPRADLCTYSIVI 103

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ-EEMLAKGF 519
               + G+L +A      ++R G       ++  + G      TS+A  +    M A G 
Sbjct: 104 GCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGC 163

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGD----GFIPDHITYTSIIHASLEMGDLR 575
            P+  +YN+L+ GLC     ++A  LL  M+ D    G  PD ++YT++I+  L  G L 
Sbjct: 164 TPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLD 223

Query: 576 RGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALI 635
           +   LF+ ML +G+SP  +TY  L+H + + G+ + A   F +M   G+ P+V+TYN L+
Sbjct: 224 KAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLM 283

Query: 636 NGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIE 695
             LC+  R  +A  +F  M ++G  P+   Y  L++     G   +  +L   M+    +
Sbjct: 284 VYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQ 343

Query: 696 PDY 698
           PD+
Sbjct: 344 PDH 346



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 108/211 (51%), Gaps = 11/211 (5%)

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           DL TY++++    + G L+ A   L +++  G+    IT++ ++     +   +R  D  
Sbjct: 95  DLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKG---LCHDKRTSDAM 151

Query: 582 NNMLRK----GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR----PNVITYNA 633
           +  LR+    G +P   +Y +L+       R + A      M     R    P+V++Y  
Sbjct: 152 DIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTT 211

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
           +INGL R  ++D+AY LF +M ++G+ PN  TY  L++  C++G  +EA+ ++++M    
Sbjct: 212 VINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDG 271

Query: 694 IEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           +EPD  T++ L++        + A +  +S+
Sbjct: 272 VEPDVVTYNTLMVYLCKNGRSMEARKVFDSM 302


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 147/494 (29%), Positives = 260/494 (52%), Gaps = 9/494 (1%)

Query: 235 GEFG--IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
           G FG  I P++ TYN +L S C  G++  A+ L   ++ RG +P+ VTY+ L++G +++ 
Sbjct: 148 GAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHD 207

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV-TRGVAPTLATY 351
           +L+ A  L+ +M   G++  A  YN ++ G    G+  +A+ + E++V   G +P LATY
Sbjct: 208 QLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATY 267

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
            +++ GLCK GR  +A   +  M+  N   D ++Y  L++G CRSG++  A  ++ ++  
Sbjct: 268 KVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVK 327

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
             LV  V  YN+LI G C  G    A +  ++    GI   + TY IM  G    G +S 
Sbjct: 328 AGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIR-QITTYNIMTKGLLDSGMVSE 386

Query: 472 AREFFNEMLRKG-LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
           A E   ++       PD+  + T I G  + G  + A+ + E+    G   D+ +Y+ ++
Sbjct: 387 ATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMI 446

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
           +  CK G   +ANE+ + MV DG  P+   Y ++I+    +  +     ++  M   G  
Sbjct: 447 NRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCC 506

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           PT++TY  LI       + + A     EM  +G +P++ TY +LI GLCR +++D A  +
Sbjct: 507 PTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRI 566

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLD 710
           + ++ + G+  +   + ILI+  C+AG   EA  +Y EM ++   P+  T++ L    +D
Sbjct: 567 WDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTL----MD 622

Query: 711 KDYKVHAVEYLESL 724
             Y++ +++   SL
Sbjct: 623 GFYEIGSIDKAASL 636



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 143/493 (29%), Positives = 245/493 (49%), Gaps = 11/493 (2%)

Query: 184 TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMGEFGIKPS 242
            K   ++  L + ++M   G+  D    N ++      G   KA +V+ +++ + G  P+
Sbjct: 204 AKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPN 263

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           + TY  MLD  CK G  +EA E+   M       + VTY +LI G  R+G+++ A  +  
Sbjct: 264 LATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYS 323

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           DM+K GL +    YN +I G+ E G   EA    +     G+   + TYNI+  GL   G
Sbjct: 324 DMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIR-QITTYNIMTKGLLDSG 382

Query: 363 RVSDARHRFFEMLRK-----NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
            VS+A     E+L++     +  PD +++ TL++G C +G    AF + ++ R+      
Sbjct: 383 MVSEAT----ELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELD 438

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           V +Y+++I+  C+ G    A ++ +NM+  G  P+   Y  ++NG C++  ++ A + + 
Sbjct: 439 VFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYI 498

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           EM   G  P    Y T I G  K     EA  L +EML +GF PD+ TY  L+ GLC+  
Sbjct: 499 EMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDK 558

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            ++ A  +  +++  G   D + +  +IH     G +     ++  M  K  SP LVTY 
Sbjct: 559 KVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYN 618

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
            L+      G ++ A   ++ +   G++P+++TYN  I GLC   R  +   L  ++   
Sbjct: 619 TLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLAT 678

Query: 658 GILPNKYTYTILI 670
           GI+P   T++IL+
Sbjct: 679 GIMPTVITWSILV 691



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 200/388 (51%), Gaps = 2/388 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V+    V++ M++ GL+ DV   N +IK   + G + +A + +   G  GI+  I TYN 
Sbjct: 315 VDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIR-QITTYNI 373

Query: 249 MLDSFCKEGEMQEALELLWEMQGRG-CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
           M       G + EA ELL +++    CSP+ VT+  LI G   NG   +A  ++ D    
Sbjct: 374 MTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNS 433

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           G ++   SY+ +I  + + G   +A  + + MV  G  P    YN LI G C+  +++DA
Sbjct: 434 GEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDA 493

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
              + EM      P II+YNTL+ G C++    EA  L  E+  R   P + TY +LI G
Sbjct: 494 IKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRG 553

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           LCR   ++VA ++ + +++ G+  DV+ + I+++G C  G +  A   + EM  K   P+
Sbjct: 554 LCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPN 613

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              Y T + G  ++G   +A  L   +L  G  PD++TYN  + GLC      E   LL 
Sbjct: 614 LVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLN 673

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLR 575
           +++  G +P  IT++ ++ A ++ G ++
Sbjct: 674 EVLATGIMPTVITWSILVRAVIKYGPIQ 701



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 146/313 (46%), Gaps = 7/313 (2%)

Query: 416 PTVVTYNTLIDGLCR---YGDLEVA-QQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           P V ++NTL+D   R   Y D +     L      + I P++ TY I++   C  G++  
Sbjct: 117 PGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDR 176

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A   F+ + R+G+ PDR  Y+T ++G  K      A  L +EM   G   D + YN L+ 
Sbjct: 177 AVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLS 236

Query: 532 GLCKLGSLEEANELLRKMVGD-GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
           G  + G  E+A ++  ++V D G  P+  TY  ++    ++G  +   ++++ M+     
Sbjct: 237 GCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQ 296

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
              VTY +LIH     G ++ A   +S+M   G+  +V  YN+LI G C + R  +A+  
Sbjct: 297 ADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKF 356

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML-DREIEPDYCTHSALLLKQL 709
           +      GI     TY I+     ++G   EA  L K++  D    PD  T   L+    
Sbjct: 357 WDSTGFSGIR-QITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLC 415

Query: 710 DKDYKVHAVEYLE 722
           +  Y   A E LE
Sbjct: 416 ENGYANRAFEILE 428



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 82/333 (24%), Positives = 139/333 (41%), Gaps = 59/333 (17%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           A    + +E       D+  F T++  L E+G    A+ ++E     N    LDV     
Sbjct: 387 ATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDAR--NSGEELDVF---S 441

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
            SS ++          + K         V+  M+++G  P+    N +I     NGF   
Sbjct: 442 YSSMINR---------FCKDGRTHDANEVYKNMVKDGCKPNSHVYNALI-----NGFCRV 487

Query: 227 AR-----EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY 281
           ++     ++Y  M   G  P+I+TYNT++D  CK  + QEA  L  EM  RG  P+  TY
Sbjct: 488 SKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTY 547

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAH--------------------------- 314
             LI G  R+ +++ A  +  ++L  GL+V                              
Sbjct: 548 ASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKE 607

Query: 315 --------SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
                   +YN ++ G+ E G + +A +L   ++  G+ P + TYN  I GLC   R  +
Sbjct: 608 KNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPE 667

Query: 367 ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
                 E+L   ++P +I+++ L+    + G I
Sbjct: 668 GVLLLNEVLATGIMPTVITWSILVRAVIKYGPI 700



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/138 (23%), Positives = 65/138 (47%), Gaps = 2/138 (1%)

Query: 158 ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
           I D ++  GL   V + + ++L+        V++   ++ +M      P++   N ++  
Sbjct: 566 IWDEILDAGLQ--VDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDG 623

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
             + G   KA  ++  + + G+KP IVTYNT +   C      E + LL E+   G  P 
Sbjct: 624 FYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPT 683

Query: 278 GVTYNVLITGFSRNGELE 295
            +T+++L+    + G ++
Sbjct: 684 VITWSILVRAVIKYGPIQ 701


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 150/520 (28%), Positives = 266/520 (51%), Gaps = 5/520 (0%)

Query: 205 LPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALE 264
           LP + +CN +++ L   G     R  + ++   G +P    +N ++ +    G++  AL 
Sbjct: 119 LPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALA 178

Query: 265 LLWEMQGR---GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC 321
           ++  M GR      P+  +YNV+I G  R+G+   A  +  +M+ +G+  +  +YN +I 
Sbjct: 179 MVRRM-GRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMID 237

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           G+ + G L     L ++M+  G  P + TYN+L+ GLC+ GR+ + R    EM   ++ P
Sbjct: 238 GHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFP 297

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           D  +Y+ L  G  R+G       LF E   + ++    T + L++GLC+ G +  A+Q+ 
Sbjct: 298 DGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVL 357

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
           E +++ G++P  + Y  ++NG C++ +L  A   F +M  + ++PD   Y   I G  KL
Sbjct: 358 EMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKL 417

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
              ++A  L  EM   G  P + T+N L+      G LE+   +L  M   G   D I++
Sbjct: 418 EMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISF 477

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
            S++ A  + G +     + ++M+ K ++P    Y  +I A+   G  E AF+   +M+ 
Sbjct: 478 GSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKN 537

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
            G+  +++TYN L+ GLCR  +ID+A  L   +  +G+ P+  +Y  +I+  CN G+  +
Sbjct: 538 SGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDK 597

Query: 682 ALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYL 721
           AL L +EM    I P   T+   L+  L    +VH +E L
Sbjct: 598 ALELLQEMNKYGIRPTLRTYHT-LVSALASAGRVHDMECL 636



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 155/504 (30%), Positives = 249/504 (49%), Gaps = 2/504 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG--EFGIKPSIVTYNTMLDS 252
            F  ++  G  PD    N++++     G    A  + R MG  E    P   +YN ++  
Sbjct: 144 AFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAG 203

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
             + G+  +AL++  EM   G  PN +TYN +I G  + G+LE    L   ML  G K +
Sbjct: 204 LWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPN 263

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
             +YN ++ G    G + E   L +EM +  + P   TY+IL  GL + G        F 
Sbjct: 264 IVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFA 323

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
           E L+K V+    + + LL G C+ G + +A  + + L    LVPT V YNTLI+G C+  
Sbjct: 324 ESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVR 383

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
           DL  A  + E M ++ I PD ITY  ++NG CK+  ++ A +   EM + G+ P    + 
Sbjct: 384 DLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFN 443

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
           T I      G   + + +  +M  KG   D+I++  +V   CK G + EA  +L  M+  
Sbjct: 444 TLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYK 503

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
              P+   Y SII A +E GD  +   L   M   G+S ++VTY +L+       +++ A
Sbjct: 504 DVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEA 563

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
                 ++ +G+RP+V++YN +I+  C     D+A  L  +M + GI P   TY  L++ 
Sbjct: 564 EELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSA 623

Query: 673 NCNAGNWQEALRLYKEMLDREIEP 696
             +AG   +   LY++ML + +EP
Sbjct: 624 LASAGRVHDMECLYQQMLHKNVEP 647



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 146/489 (29%), Positives = 245/489 (50%), Gaps = 35/489 (7%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           PD  + N +I  L  +G    A +V+  M + G+ P+ +TYNTM+D   K G+++    L
Sbjct: 192 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 251

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
             +M   G  PN VTYNVL++G  R G +++ R L+ +M    +     +Y+ +  G + 
Sbjct: 252 RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 311

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
            G     L+L  E + +GV     T +IL+ GLCK G+V+ A      ++   ++P  + 
Sbjct: 312 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 371

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR--------------- 430
           YNTL+ GYC+  ++  AF +F++++SR++ P  +TYN LI+GLC+               
Sbjct: 372 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 431

Query: 431 --------------------YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
                                G LE    +  +M  +GI  DVI++  +V   CK G + 
Sbjct: 432 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 491

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            A    ++M+ K + P+   Y + I   ++ GDT +A+ L E+M   G    ++TYN+L+
Sbjct: 492 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLL 551

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
            GLC+   ++EA EL+  +   G  PD ++Y +II A    GD  +  +L   M + G+ 
Sbjct: 552 KGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIR 611

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           PTL TY  L+ A A+ GR+      + +M  K + P+   Y  +++   R     +   L
Sbjct: 612 PTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASL 671

Query: 651 FIDMEEEGI 659
             +M E+GI
Sbjct: 672 KKEMSEKGI 680



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 191/365 (52%)

Query: 193 LLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDS 252
           L +F + L+ G++     C+ ++  L  +G   KA +V  M+   G+ P+ V YNT+++ 
Sbjct: 319 LSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLING 378

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
           +C+  +++ A  +  +M+ R   P+ +TYN LI G  +   + +A  L+ +M K G+  S
Sbjct: 379 YCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPS 438

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
             ++N +I  Y   G L +   +  +M  +G+   + ++  ++   CK G++ +A     
Sbjct: 439 VETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILD 498

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
           +M+ K+V P+   YN+++  Y  SG+  +AFLL +++++  +  ++VTYN L+ GLCR  
Sbjct: 499 DMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSS 558

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
            ++ A++L   + NQG+ PDV++Y  +++  C  G+   A E   EM + G++P    Y 
Sbjct: 559 QIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYH 618

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
           T ++     G   +   L ++ML K   P    Y ++V    +  +  +   L ++M   
Sbjct: 619 TLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEK 678

Query: 553 GFIPD 557
           G   D
Sbjct: 679 GIAFD 683



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 171/330 (51%), Gaps = 2/330 (0%)

Query: 158 ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
           +L++L+  GL    +  I + L+  Y +   +     +F +M    + PD    N +I  
Sbjct: 356 VLEMLVHTGLVP--TTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALING 413

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
           L       KA ++   M + G+ PS+ T+NT++D++   G++++   +L +MQ +G   +
Sbjct: 414 LCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSD 473

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
            +++  ++  F +NG++ +A  ++ DM+   +  +A  YN II  Y E G   +A  L E
Sbjct: 474 VISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVE 533

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
           +M   GV+ ++ TYN+L+ GLC+  ++ +A    + +  + + PD++SYNT++   C  G
Sbjct: 534 KMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKG 593

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
           +  +A  L  E+    + PT+ TY+TL+  L   G +   + L + M+++ + P    Y 
Sbjct: 594 DTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYG 653

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           IMV+   +  N S       EM  KG+  D
Sbjct: 654 IMVDAYVRCENDSKVASLKKEMSEKGIAFD 683


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 137/425 (32%), Positives = 231/425 (54%), Gaps = 7/425 (1%)

Query: 193 LLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDS 252
           + + ++M+  G  PD+     ++  L   G +  A  +   M +  ++P ++ YNT++D 
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
            CK   M +AL L  EM+ +G  PN VTY+ LI+     G    A  L+ DM++  +   
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
             +++ +I  + ++G LVEA  L +EMV R + P++ TY+ LI G C   R+ +A+  F 
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
            M+ K+  PD+++YNTL+ G+C+   + E   +F E+  R LV   VTYN LI GL + G
Sbjct: 181 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 240

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
           D ++AQ++ + M++ G+ P+++TY  +++G CK G L  A   F  + R  ++P  + Y 
Sbjct: 241 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 300

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
             I G  K G   + + L   +  KG  PD++ YN ++ G C+ GS EEA+ L ++M  D
Sbjct: 301 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 360

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL---SPTLVTYTVLIHAHAARGRL 609
           G +P+   Y ++I A L  GD     +L   M   G    + T+   T ++H     GRL
Sbjct: 361 GTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLH----DGRL 416

Query: 610 ELAFM 614
           + +F+
Sbjct: 417 DKSFL 421



 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 136/409 (33%), Positives = 219/409 (53%)

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
           + L+  M  +GC P+ VTY V++ G  + G+ + A  L+  M +  L+     YN II G
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
             +   + +ALNL +EM T+G+ P + TY+ LI  LC +GR SDA     +M+ + + PD
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
           + +++ L+  + + G + EA  L+DE+  R++ P++VTY++LI+G C +  L+ A+Q+ E
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            M+++   PDV+TY  ++ G CK   +    E F EM ++GL  +   Y   I G  + G
Sbjct: 181 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 240

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
           D   A  + +EM++ G PP+++TYN L+ GLCK G LE+A  +   +      P   TY 
Sbjct: 241 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 300

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
            +I    + G +  G DLF N+  KG+ P +V Y  +I     +G  E A   F EM+  
Sbjct: 301 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 360

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
           G  PN   YN LI    R    + +  L  +M   G   +  T  ++ N
Sbjct: 361 GTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 409



 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 120/386 (31%), Positives = 213/386 (55%), Gaps = 1/386 (0%)

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
           + L + MV +G  P L TY +++ GLCK G    A +   +M +  + P ++ YNT++ G
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
            C+  ++ +A  LF E+ ++ + P VVTY++LI  LC YG    A +L  +MI + I PD
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
           V T++ +++   K G L  A + ++EM+++ + P    Y++ I G        EA ++ E
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
            M++K   PD++TYN L+ G CK   +EE  E+ R+M   G + + +TY  +I    + G
Sbjct: 181 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 240

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
           D    +++F  M+  G+ P ++TY  L+      G+LE A + F  +Q   + P + TYN
Sbjct: 241 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 300

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
            +I G+C+  +++  + LF ++  +G+ P+   Y  +I+  C  G+ +EA  L+KEM + 
Sbjct: 301 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 360

Query: 693 EIEPDYCTHSALLLKQL-DKDYKVHA 717
              P+   ++ L+  +L D D +  A
Sbjct: 361 GTLPNSGCYNTLIRARLRDGDREASA 386



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 122/391 (31%), Positives = 207/391 (52%)

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            LI  M+  G +    +Y  ++ G  ++G    A NL  +M    + P +  YN +I GL
Sbjct: 2   ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 61

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           CK+  + DA + F EM  K + P++++Y++L+   C  G   +A  L  ++  R + P V
Sbjct: 62  CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 121

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
            T++ LID   + G L  A++L + M+ + I P ++TY+ ++NG C    L  A++ F  
Sbjct: 122 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 181

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M+ K   PD   Y T I G  K     E   +  EM  +G   + +TYN+L+ GL + G 
Sbjct: 182 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 241

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
            + A E+ ++MV DG  P+ +TY +++    + G L +   +F  + R  + PT+ TY +
Sbjct: 242 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 301

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           +I      G++E  +  F  + +KG++P+V+ YN +I+G CR    ++A  LF +M+E+G
Sbjct: 302 MIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 361

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEM 689
            LPN   Y  LI      G+ + +  L KEM
Sbjct: 362 TLPNSGCYNTLIRARLRDGDREASAELIKEM 392



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 121/425 (28%), Positives = 215/425 (50%), Gaps = 5/425 (1%)

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           + RM+ + G +P +VTY  +++  CK G+   A  LL +M+     P  + YN +I G  
Sbjct: 4   IDRMVAK-GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           +   ++ A  L ++M   G++ +  +Y+ +I      G   +A  L  +M+ R + P + 
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           T++ LI    K G++ +A   + EM+++++ P I++Y++L+ G+C    + EA  +F+ +
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
            S++  P VVTYNTLI G C+Y  +E   ++   M  +G++ + +TY I++ G  + G+ 
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 242

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
            MA+E F EM+  G+ P+   Y T + G  K G   +A  + E +      P + TYN++
Sbjct: 243 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 302

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           + G+CK G +E+  +L   +   G  PD + Y ++I      G       LF  M   G 
Sbjct: 303 IEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 362

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
            P    Y  LI A    G  E +     EM+  G   +  T   L+  +    R+D++  
Sbjct: 363 LPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHDGRLDKS-- 419

Query: 650 LFIDM 654
            F+DM
Sbjct: 420 -FLDM 423



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/173 (32%), Positives = 93/173 (53%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K   VE+ + VF +M + GL+ +    N +I+ L   G    A+E+++ M   G+ P+
Sbjct: 201 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 260

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           I+TYNT+LD  CK G++++A+ +   +Q     P   TYN++I G  + G++E    L  
Sbjct: 261 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 320

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
           ++   G+K    +YN +I G+  KG   EA  L +EM   G  P    YN LI
Sbjct: 321 NLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 373


>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
 gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
          Length = 764

 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 157/535 (29%), Positives = 266/535 (49%), Gaps = 1/535 (0%)

Query: 171 VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV 230
           V++ +L  L+ +++++  V+  L + ++M  N    D+   N  I      G    A + 
Sbjct: 94  VNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKF 153

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
           +  M   G+ P  VTY +M+   CK   + EA+E+  +M+     P    YN +I G+  
Sbjct: 154 FHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGS 213

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
            G+ ++A  L+      G   S  +YN I+    +KG   +AL + EEM  R   P L T
Sbjct: 214 AGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEM-KRDAMPNLPT 272

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           YNI+I  LCK G V  A      M    + P++ + N ++   C++  + EA  +F+ + 
Sbjct: 273 YNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMD 332

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
            +   P   T+ +LIDGL + G ++ A ++ E M++   +P+V+ YT ++    K     
Sbjct: 333 YKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKE 392

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
              + + EM+R G  PD     T +    K G+T +   L EE+ A+GF PD  +Y++L+
Sbjct: 393 DGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILI 452

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
           H L K G   E  EL   M   G + D   Y ++I    + G + +   L   M   G  
Sbjct: 453 HSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHH 512

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           PT+VTY  ++   A   RL+ A+M F E +  GI  N + Y++LI+G  ++ R+D+AY +
Sbjct: 513 PTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLV 572

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             +M ++G+ PN YT+  L++    A    EAL  ++ M D +  P+  T+  L+
Sbjct: 573 MEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILI 627



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 159/590 (26%), Positives = 271/590 (45%), Gaps = 23/590 (3%)

Query: 103 KPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVET------VVCVNMH 156
           K  +A +FF  ++   G+  D+  + +++ +L ++  L  A  + E       V C   +
Sbjct: 146 KVDMAWKFFHEMKAN-GLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAY 204

Query: 157 GILDVLIGGG--------------LSSCV-SIKILDLLLLIYTKKSMVEQCLLVFNKMLR 201
             + +  G                   C+ S+   + +L    KK   ++ L +F +M R
Sbjct: 205 NTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKR 264

Query: 202 NGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQE 261
           + + P++   N II +L   G    A +V   M E G+ P++ T N M+D  CK  ++ E
Sbjct: 265 DAM-PNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDE 323

Query: 262 ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC 321
           A  +   M  + CSP+G T+  LI G  + G ++ A  +   ML      +   Y  +I 
Sbjct: 324 ACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIR 383

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
            + +     +   + +EM+  G +P L   N  +  + K G     R  F E+  +  +P
Sbjct: 384 NFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLP 443

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           D  SY+ L++   ++G   E + L+  ++ +  V     YNT+IDG C+ G +  A QL 
Sbjct: 444 DTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLL 503

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
           E M   G  P V+TY  +V+G  K+  L  A   F E    G++ ++  Y++ I G  K+
Sbjct: 504 EEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKV 563

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
           G   EAY + EEM+ KG  P++ T+N L+ GL K   + EA    + M      P+ ITY
Sbjct: 564 GRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITY 623

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
             +I+   ++    +    +  M ++GL P  +TYT +I   A  G +  A   F   + 
Sbjct: 624 CILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRA 683

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
            G  P+  +YNA+I GL    R   AY LF +   +G   +  T   L++
Sbjct: 684 SGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLD 733



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 149/580 (25%), Positives = 254/580 (43%), Gaps = 69/580 (11%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +  +M   G  P    C  ++     +   ++A ++ +MM  F  +P+   Y T++ +  
Sbjct: 13  ILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALS 72

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           + GE    L L  +MQ  G   N      LI  FSR G ++ A  L+ +M          
Sbjct: 73  EVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIV 132

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
            YN  I  + + G +  A     EM   G+ P   TY  ++  LCK  R+ +A   F +M
Sbjct: 133 LYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQM 192

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT----------- 423
            +   +P   +YNT++ GY  +G   EA+ L +  R++  +P+VV YN            
Sbjct: 193 EQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKT 252

Query: 424 -----------------------LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
                                  +I  LC+ G++E A ++++ M   G+ P+V T  IM+
Sbjct: 253 DKALRIFEEMKRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMI 312

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
           +  CK   L  A   F  M  K   PD   + + I G  K G   +AYR+ E ML     
Sbjct: 313 DRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQI 372

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           P+++ Y  L+    K    E+ +++ ++M+  G  PD +   + +    + G+  +GR L
Sbjct: 373 PNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRAL 432

Query: 581 FNNMLRKGLSPTLVTYTVLIH----AHAAR------------------------------ 606
           F  +  +G  P   +Y++LIH    A  AR                              
Sbjct: 433 FEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCK 492

Query: 607 -GRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
            G++  A+    EM+  G  P V+TY ++++GL ++ R+D+AY LF + +  GI  N+  
Sbjct: 493 SGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVI 552

Query: 666 YTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           Y+ LI+     G   EA  + +EM+ + + P+  T + LL
Sbjct: 553 YSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLL 592



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 214/464 (46%), Gaps = 4/464 (0%)

Query: 232 RMMGEF---GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
           +++GE    G  P+  T   ++ S  K  ++ EA +LL  M+     P    Y  LI   
Sbjct: 12  QILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGAL 71

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
           S  GE ++   L   M +LG +V+ H    +I  +S +G +  AL+L +EM +      +
Sbjct: 72  SEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADI 131

Query: 349 ATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDE 408
             YN+ I    K G+V  A   F EM    ++PD ++Y +++   C++  + EA  +F++
Sbjct: 132 VLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQ 191

Query: 409 LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
           +     VP    YNT+I G    G  + A  L E    +G +P V+ Y  ++    K G 
Sbjct: 192 MEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGK 251

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
              A   F EM R  + P+   Y   I    K G+   A+++++ M   G  P++ T N+
Sbjct: 252 TDKALRIFEEMKRDAM-PNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINI 310

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           ++  LCK   L+EA  +   M      PD  T+ S+I    + G +     ++  ML   
Sbjct: 311 MIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDAD 370

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
             P +V YT LI       R E     + EM   G  P+++  N  ++ + +    ++  
Sbjct: 371 QIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGR 430

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
            LF +++  G LP+  +Y+ILI+    AG  +E   LY  M D+
Sbjct: 431 ALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQ 474



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 118/420 (28%), Positives = 198/420 (47%), Gaps = 14/420 (3%)

Query: 123 DEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLI 182
           D   FC++++ L + G +  AY + E         +LD           ++ +   L+  
Sbjct: 339 DGATFCSLIDGLGKQGRVDDAYRIYER--------MLDA------DQIPNVVVYTSLIRN 384

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K    E    ++ +M+R+G  PD+   N  +  +   G + K R ++  +   G  P 
Sbjct: 385 FFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPD 444

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             +Y+ ++ S  K G  +E  EL + M+ +GC  +   YN +I GF ++G++ +A  L+ 
Sbjct: 445 TRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLE 504

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M  +G   +  +Y  ++ G ++   L EA  L EE  + G+      Y+ LI G  K G
Sbjct: 505 EMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVG 564

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           RV +A     EM++K + P++ ++N LL G  ++  I EA + F  ++     P  +TY 
Sbjct: 565 RVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYC 624

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            LI+GLC+      A    + M  QG+ P+ ITYT M++G  K GN++ A   F      
Sbjct: 625 ILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRAS 684

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G  PD  +Y   I G        +AY+L EE   KG      T   L+  L K   LE+A
Sbjct: 685 GGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLDALHKAECLEQA 744



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 117/278 (42%), Gaps = 1/278 (0%)

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           + R  + +  +Q+   M   G  P   T   +V    K   L  A +    M     +P 
Sbjct: 1   MVRTRNFDYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPA 60

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
             AYTT I    ++G++     L  +M   G+  ++     L+    + G ++ A  LL 
Sbjct: 61  FSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLD 120

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
           +M  + F  D + Y   I    ++G +      F+ M   GL P  VTYT ++       
Sbjct: 121 EMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKAN 180

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
           RL+ A   F +M+     P    YN +I G     + D+AY L      +G +P+   Y 
Sbjct: 181 RLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYN 240

Query: 668 ILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            ++      G   +ALR+++EM  R+  P+  T++ ++
Sbjct: 241 CILTCLGKKGKTDKALRIFEEM-KRDAMPNLPTYNIII 277


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 151/521 (28%), Positives = 267/521 (51%), Gaps = 7/521 (1%)

Query: 205 LPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALE 264
           LP + +CN +++ L   G     R  + ++   G +P    +N ++ +    G++  AL 
Sbjct: 119 LPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALA 178

Query: 265 LLWEMQGR---GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC 321
           +L  M GR      P+  +YNV+I G  R+G+   A  +  +M+ +G+  +  +YN +I 
Sbjct: 179 MLRRM-GRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMID 237

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           G+ + G L     L ++M+  G  P + TYN+L+ GLC+ GR+ + R    EM   +++P
Sbjct: 238 GHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLP 297

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           D  +Y+ L  G  R+G       LF E   + ++    T + L++GLC+ G +  A+Q+ 
Sbjct: 298 DGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVF 357

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
           E +++ G++P  + Y  ++NG C++ +L  A   F +M  + ++PD   Y   I G  KL
Sbjct: 358 EMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKL 417

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
              ++A  L  EM   G  P + T+N L+      G LE+   +L  M   G   D I++
Sbjct: 418 EMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISF 477

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
            S++ A  + G +     + ++M+ K ++P    Y  +I A+   G  E A +   +M+ 
Sbjct: 478 GSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKN 537

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
            G+  +++TYN L+ GLCR  +ID+A  L   +  +G+ P+  +Y  +I+  CN G+  +
Sbjct: 538 SGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDK 597

Query: 682 ALRLYKEMLDREIEPDYCT-HSALLLKQLDKDYKVHAVEYL 721
           AL L +EM    I P   T H+  L+  L    +VH +E L
Sbjct: 598 ALELLQEMNKYGIRPTLRTCHT--LVSALASAGRVHDMECL 636



 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 155/504 (30%), Positives = 250/504 (49%), Gaps = 2/504 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG--EFGIKPSIVTYNTMLDS 252
            F  ++  G  PD    N++++     G    A  + R MG  E    P   +YN ++  
Sbjct: 144 AFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVIAG 203

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
             + G+  +AL++  EM   G +PN +TYN +I G  + G+LE    L   ML  G K +
Sbjct: 204 LWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPN 263

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
             +YN ++ G    G + E   L +EM +  + P   TY+IL  GL + G        F 
Sbjct: 264 VVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFA 323

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
           E L+K V+    + + LL G C+ G + +A  +F+ L    LVPT V YNTLI+G C+  
Sbjct: 324 ESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVR 383

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
           DL  A  + E M ++ I PD ITY  ++NG CK+  ++ A +   EM + G+ P    + 
Sbjct: 384 DLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFN 443

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
           T I      G   + + +  +M  KG   D+I++  +V   CK G + EA  +L  M+  
Sbjct: 444 TLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYK 503

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
              P+   Y SII A +E GD  +   L   M   G+S ++VTY +L+       +++ A
Sbjct: 504 DVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEA 563

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
                 ++ +G+RP+V++YN +I+  C     D+A  L  +M + GI P   T   L++ 
Sbjct: 564 EELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSA 623

Query: 673 NCNAGNWQEALRLYKEMLDREIEP 696
             +AG   +   LY++ML + +EP
Sbjct: 624 LASAGRVHDMECLYQQMLHKNVEP 647



 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 146/489 (29%), Positives = 245/489 (50%), Gaps = 35/489 (7%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           PD  + N +I  L  +G    A +V+  M + G+ P+ +TYNTM+D   K G+++    L
Sbjct: 192 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRL 251

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
             +M   G  PN VTYNVL++G  R G +++ R L+ +M    +     +Y+ +  G + 
Sbjct: 252 RDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTR 311

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
            G     L+L  E + +GV     T +IL+ GLCK G+V+ A+  F  ++   ++P  + 
Sbjct: 312 TGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVI 371

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR--------------- 430
           YNTL+ GYC+  ++  AF +F++++SR++ P  +TYN LI+GLC+               
Sbjct: 372 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 431

Query: 431 --------------------YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
                                G LE    +  +M  +GI  DVI++  +V   CK G + 
Sbjct: 432 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 491

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            A    ++M+ K + P+   Y + I   ++ GDT +A  L E+M   G    ++TYN+L+
Sbjct: 492 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLL 551

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
            GLC+   ++EA EL+  +   G  PD ++Y +II A    GD  +  +L   M + G+ 
Sbjct: 552 KGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIR 611

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           PTL T   L+ A A+ GR+      + +M  K + P+   Y  +++   R     +   L
Sbjct: 612 PTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASL 671

Query: 651 FIDMEEEGI 659
             +M E+GI
Sbjct: 672 KKEMSEKGI 680



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 194/374 (51%)

Query: 184 TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
           T+    +  L +F + L+ G++     C+ ++  L  +G   KA++V+ M+   G+ P+ 
Sbjct: 310 TRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTT 369

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           V YNT+++ +C+  +++ A  +  +M+ R   P+ +TYN LI G  +   + +A  L+ +
Sbjct: 370 VIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVME 429

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M K G+  S  ++N +I  Y   G L +   +  +M  +G+   + ++  ++   CK G+
Sbjct: 430 MEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGK 489

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           + +A     +M+ K+V P+   YN+++  Y  SG+  +A LL +++++  +  ++VTYN 
Sbjct: 490 IPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNL 549

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           L+ GLCR   ++ A++L   + NQG+ PDV++Y  +++  C  G+   A E   EM + G
Sbjct: 550 LLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYG 609

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           ++P      T ++     G   +   L ++ML K   P    Y ++V    +  +  +  
Sbjct: 610 IRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVA 669

Query: 544 ELLRKMVGDGFIPD 557
            L ++M   G   D
Sbjct: 670 SLKKEMSEKGIAFD 683



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 125/468 (26%), Positives = 199/468 (42%), Gaps = 70/468 (14%)

Query: 193 LLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDS 252
           L VF++M+  G+ P+    N +I      G       +   M   G KP++VTYN +L  
Sbjct: 214 LKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSG 273

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
            C+ G M E   L+ EM      P+G TY++L  G +R GE +    L  + LK G+ + 
Sbjct: 274 LCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLG 333

Query: 313 AHS-----------------------------------YNPIICGYSEKGLLVEALNLEE 337
           A++                                   YN +I GY +   L  A  + E
Sbjct: 334 AYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFE 393

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP---------------- 381
           +M +R + P   TYN LI GLCK   V+ A     EM +  V P                
Sbjct: 394 QMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAG 453

Query: 382 -------------------DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
                              D+IS+ +++  +C++G I EA  + D++  +++ P    YN
Sbjct: 454 QLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYN 513

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           ++ID     GD E A  L E M N G+   ++TY +++ G C+   +  A E    +  +
Sbjct: 514 SIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQ 573

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           GL+PD  +Y T I+     GDT +A  L +EM   G  P L T + LV  L   G + + 
Sbjct: 574 GLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDM 633

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
             L ++M+     P    Y  ++ A +   +  +   L   M  KG++
Sbjct: 634 ECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIA 681


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 146/472 (30%), Positives = 246/472 (52%), Gaps = 1/472 (0%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           GI P+ V Y  ++    + G  Q+A EL  +M G+G  P+    ++++ G   +   + A
Sbjct: 327 GIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDA 386

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L  +M   GL     +YN +I  + +   L EALNL + M   GV P++ TYN L+ G
Sbjct: 387 VCLFEEMADSGLP-DVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMG 445

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
            CK G + +A   + EM  +   P++++Y TL+ GY    +   A+ L DE++   +   
Sbjct: 446 YCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCN 505

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
             TYN LI+G+C    +     + ++ +++G +P ++TY  ++NG  K G +  A   + 
Sbjct: 506 DYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQ 565

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           +M  KGL P+   YT+ I G  + G +  A ++  ++  +G  PD++ YN L++G C+ G
Sbjct: 566 QMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEG 625

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
           ++  A +LL  ++ DG  P+ + Y S+I     +  ++     + +M++ G+     TYT
Sbjct: 626 NMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYT 685

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
            LI   +  G +  A   +SEM  KG  P+  T+ AL +GLCR   ID A  L  +M   
Sbjct: 686 TLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRL 745

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQL 709
            + PN + Y +LIN        QEA RL+ EML+  I+PD  T+  L+ K+ 
Sbjct: 746 DVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVSKKF 797



 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 161/582 (27%), Positives = 291/582 (50%), Gaps = 29/582 (4%)

Query: 81  DHFQAVVSDPE-----LLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILI 135
           D       DP+     L +  L ++ +  R ALR  R ++ + G    +F + T++++L+
Sbjct: 216 DEMPGAEIDPDQRVYALAITALCKLGDGGR-ALRMLREMK-EVGFDTCDFTYRTMVDVLV 273

Query: 136 ESGLLRSAYWV----------VETVVCVN-MHG-ILDVLIGGGLS--------SCVSIKI 175
           ++G +  A  V          ++ +V    M G  L   +G  L+          V  K+
Sbjct: 274 KTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKV 333

Query: 176 L-DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           +  +L+    +  M ++   +  +M   GLLP     + ++K L ++     A  ++  M
Sbjct: 334 MYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEM 393

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
            + G+ P + TYN ++   C+  +++EAL L   M+  G  P+  TYN L+ G+ + G +
Sbjct: 394 ADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCM 452

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           ++A  L  +M   G K +  +Y  ++ GY  K     A  L +EM   GV+    TYN+L
Sbjct: 453 DEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVL 512

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           I G+C   RV +        + +  IP +++YN+++ G+ ++G +G AF ++ ++R + L
Sbjct: 513 INGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGL 572

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P ++TY + IDG CR G  ++A ++  ++  +G+ PD++ Y  ++NG C+ GN+S A +
Sbjct: 573 PPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQ 632

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
               +L+ GL P+   Y + I G   L    E  +  E M+  G   D  TY  L+ G  
Sbjct: 633 LLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFS 692

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           K G++  A EL  +M+  G+IPD  T+T++ H     GD+   + L   M R  + P + 
Sbjct: 693 KDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVF 752

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
            Y +LI+ +    +L+ AF    EM   GI+P+  TY+ L++
Sbjct: 753 IYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVS 794



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 141/536 (26%), Positives = 257/536 (47%), Gaps = 5/536 (0%)

Query: 195 VFNKMLRNGLLPDVKN-CNRIIKVLRDNGFSVK-AREVYRMMGEFGIKPSIVTYNTMLDS 252
            +  M+  G++PD+K+  + +I+  R  G S K A  ++  M   G +     ++ ++ +
Sbjct: 144 TYAHMVARGVVPDIKSRTDLLIRTAR--GSSAKDALALFMEMRGRGYRVDAWMFDALMSA 201

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
             KEG  ++A+ L  EM G    P+   Y + IT   + G+  +A  ++R+M ++G    
Sbjct: 202 CLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTC 261

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
             +Y  ++    + G + EAL + +EM   G    +     L+ G C    V +A + F 
Sbjct: 262 DFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFK 321

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
           E L+  ++P  + Y  L+ G  + G   +A+ L  ++  + L+P+    + ++ GL    
Sbjct: 322 ETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDR 381

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
             + A  L E M + G LPDV TY  +++  C+   L  A   F+ M + G++P    Y 
Sbjct: 382 RWKDAVCLFEEMADSG-LPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYN 440

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
           + + G  K G   EA +L  EM  +GF P+++TY  L+ G       + A  LL +M  +
Sbjct: 441 SLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQN 500

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
           G   +  TY  +I+    +  +     +  + + +G  PT++TY  +I+     G +  A
Sbjct: 501 GVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSA 560

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
           F  + +M+ KG+ PN+ITY + I+G CR    D A  +  D+   G+ P+   Y  LIN 
Sbjct: 561 FTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALING 620

Query: 673 NCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLGA 728
            C  GN   AL+L   +L   + P+   +++L+    + +      ++ ES+  G 
Sbjct: 621 FCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGG 676


>gi|307136214|gb|ADN34051.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 653

 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 189/662 (28%), Positives = 312/662 (47%), Gaps = 47/662 (7%)

Query: 49  VLNPESESYYKELIISTVEEKPWAFCNNRWVSDHFQAVVSDPELLVRVLNRIREKPRIAL 108
           +L+P +E    + I   ++++ W F     VS           L+ RV+   R  P++AL
Sbjct: 24  LLSPSTEDIIYKAICVNLKQRRWKFLEQ--VSPSLT-----NSLVCRVVREFRNSPQLAL 76

Query: 109 RFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLS 168
            F+ WVE +          CT++ +L+ S     A  ++E+++  N    L+VL  GGL 
Sbjct: 77  EFYNWVEARDNFSHSLESCCTLVHVLVNSRNFNDALSIMESLMLKNGKSPLEVL--GGLM 134

Query: 169 SCVSI-----KILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGF 223
           +   I      + D L+   T+   VE    V  K+   G    +   N  + +L   G 
Sbjct: 135 NSYEICNSNPAVFDALVRTCTQLKSVEGAYDVIRKLRLEGFWVTIHAWNNFLNLLLKLGE 194

Query: 224 SVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNV 283
           + K   +Y  M   G   ++ T+N ++ + CKE ++ EA+ +++ M      PN V++N+
Sbjct: 195 TDKFWNMYMEMVASGYSENVNTFNLIIYALCKECKLLEAISVVYLMLKIEIWPNVVSFNM 254

Query: 284 LITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG 343
           +I   S+ GE++ A  L R+               +I G S                   
Sbjct: 255 IIDKASKMGEMDLALKLTRN-------------TEVISGGS------------------- 282

Query: 344 VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF 403
           V+P + TYN +I G CK  R+  A++   EM++  +  +  +Y  L+ GY R G++  AF
Sbjct: 283 VSPNIVTYNCIINGFCKIRRLESAKNVLAEMIKLGIDSNERTYAPLIDGYARKGSLDVAF 342

Query: 404 LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
            L DE+    L+P  V YN+LI  L   G+LE A  L  +MIN+ ILPD  TY+I+  G 
Sbjct: 343 RLCDEMVETRLIPDTVVYNSLIYWLYIEGELEEASFLLSDMINRRILPDEFTYSILTKGL 402

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
           C  G+L+ A      ++ + L  D + +   I    +  + + A +L   M+ +G  PD+
Sbjct: 403 CLSGHLNKALRVHYYIVERNLVKDAYTHNILINYMFQSRNIAGAKQLLSSMIVRGIKPDM 462

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
           +TY  LV G CK G +E A ++  K V      + + Y SI+    + G +   R L + 
Sbjct: 463 VTYGTLVAGHCKEGKIEAAVQIYDKTVKADGKSNLVVYNSILDGLCKQGSIDAARLLVDK 522

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           + + G   + VTY  L+H     G +E AF  F EM   G   N+++YN +IN LC++  
Sbjct: 523 LQQNGFLDS-VTYNTLLHGFCVNGEVEKAFALFLEMINVGSLVNIVSYNIMINFLCKMGL 581

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSA 703
           I QA  L   M  +GI+P+  TYT LI     +      + L+  M+ +   PD  T+ +
Sbjct: 582 IQQAMELMRAMASQGIVPDLITYTTLITNFVKSYGSDNVIELHDYMVLKGAVPDRQTYQS 641

Query: 704 LL 705
           L+
Sbjct: 642 LV 643



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 137/289 (47%), Gaps = 4/289 (1%)

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           M+  G   +V T+ +++   CK   L  A      ML+  + P+  ++   I    K+G+
Sbjct: 205 MVASGYSENVNTFNLIIYALCKECKLLEAISVVYLMLKIEIWPNVVSFNMIIDKASKMGE 264

Query: 504 TSEAYRL--QEEMLAKG-FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
              A +L    E+++ G   P+++TYN +++G CK+  LE A  +L +M+  G   +  T
Sbjct: 265 MDLALKLTRNTEVISGGSVSPNIVTYNCIINGFCKIRRLESAKNVLAEMIKLGIDSNERT 324

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           Y  +I      G L     L + M+   L P  V Y  LI+     G LE A    S+M 
Sbjct: 325 YAPLIDGYARKGSLDVAFRLCDEMVETRLIPDTVVYNSLIYWLYIEGELEEASFLLSDMI 384

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
            + I P+  TY+ L  GLC    +++A  +   + E  ++ + YT+ ILIN    + N  
Sbjct: 385 NRRILPDEFTYSILTKGLCLSGHLNKALRVHYYIVERNLVKDAYTHNILINYMFQSRNIA 444

Query: 681 EALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLGAE 729
            A +L   M+ R I+PD  T+  L+     K+ K+ A   +   T+ A+
Sbjct: 445 GAKQLLSSMIVRGIKPDMVTYGTLVAGHC-KEGKIEAAVQIYDKTVKAD 492


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 168/579 (29%), Positives = 280/579 (48%), Gaps = 41/579 (7%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           + ++ Y +++ V+    ++ +M+R G+LPDV   + ++  L  +G   +A  ++R M + 
Sbjct: 249 MFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKI 308

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGC----------------------- 274
           G  P+ VTY  ++D+  K     E+L LL E+  RG                        
Sbjct: 309 GAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEA 368

Query: 275 ------------SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
                       +PNGVTY VLI    + G ++ A  ++ +M +  +  +  +++ II G
Sbjct: 369 KDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIING 428

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
             ++G + +A +   EM  RG+ P + TY  +I G  K      A   + EML + V  +
Sbjct: 429 LVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVN 488

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
               ++L+ G  ++G I +A  LF E+  R ++   V Y TLIDGL + G+L  A ++ +
Sbjct: 489 KFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQ 548

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            +  + +LPD + Y + +N  C +G    A  F  EM   GL+PD+  Y T IA + + G
Sbjct: 549 ELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREG 608

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
            T++A +L   M      P+LITY+ L+ GL + G++E+A  LL +M   GF P  +T+ 
Sbjct: 609 KTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHR 668

Query: 563 SIIHASLEMGDLRRGR---DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
            ++ A  +    RR     ++   M+  GL   +  Y  L+      G    A +   EM
Sbjct: 669 RVLQACSQG---RRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEM 725

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
             +GI P+ IT+NALI G  +   +D A+  +  M   GI PN  T+  L+    +AG  
Sbjct: 726 SGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRI 785

Query: 680 QEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAV 718
            E+  +  EM  R IEP   T+  L+     +  KV AV
Sbjct: 786 GESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAV 824



 Score =  251 bits (642), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 178/630 (28%), Positives = 284/630 (45%), Gaps = 47/630 (7%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           GV  D     T+L  L   G +  A  + E +V     G LDV+   G +S V       
Sbjct: 132 GVPFDAVTVNTVLVGLCRDGRVDRAAALAEVMVRGGGIGGLDVV---GWNSLVDG----- 183

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
               Y K   +E    V  +M   G+  DV   N ++  L   G    AR++   M   G
Sbjct: 184 ----YCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDG 239

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           ++P++VTY   +  +C+   + +A  L  EM  +G  P+ VT + L+ G  ++G   +A 
Sbjct: 240 VEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAY 299

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV-------------- 344
            L R+M K+G   +  +Y  +I   ++     E+L+L  E+V+RGV              
Sbjct: 300 ALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWL 359

Query: 345 ---------------------APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
                                 P   TY +LI  LCK G V  A     EM  K++ P++
Sbjct: 360 CKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNV 419

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
           +++++++ G  + G +G+A     E++ R + P VVTY T+IDG  +    E A  +   
Sbjct: 420 VTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHE 479

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           M+ +G+  +      +VNG  K G +  A   F EM  +G+  D   YTT I G  K G+
Sbjct: 480 MLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGN 539

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
              A+++ +E+  K   PD + YNV ++ LC LG  +EA   L +M   G  PD +TY +
Sbjct: 540 LPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNT 599

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           +I A    G   +   L N M R  + P L+TY+ LI      G +E A    +EM   G
Sbjct: 600 MIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSG 659

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
             P  +T+  ++    + RR D    +   M   G+  +   Y  L+   C  G  ++A+
Sbjct: 660 FSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAM 719

Query: 684 RLYKEMLDREIEPDYCTHSALLLKQLDKDY 713
            + +EM  R I PD  T +AL+L      +
Sbjct: 720 VVLEEMSGRGIAPDTITFNALILGHFKSGH 749



 Score =  251 bits (642), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 164/546 (30%), Positives = 262/546 (47%), Gaps = 39/546 (7%)

Query: 198 KMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM---GEFGIKPSIVTYNTMLDSFC 254
           +M + G+  D    N ++  L  +G   +A  +  +M   G  G    +V +N+++D +C
Sbjct: 127 EMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALAEVMVRGGGIG-GLDVVGWNSLVDGYC 185

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K G+M+ A  +   M+ +G   + V YN L+ G  R GE++ AR ++  M + G++ +  
Sbjct: 186 KVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVV 245

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +Y   I  Y  +  + +A +L EEMV +GV P + T + L+ GLCK GR S+A   F EM
Sbjct: 246 TYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREM 305

Query: 375 -----------------------------------LRKNVIPDIISYNTLLYGYCRSGNI 399
                                              + + V+ D+I Y  L+   C+ G I
Sbjct: 306 EKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKI 365

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
            EA  +F    S N  P  VTY  LID LC+ G+++ A+Q+   M  + I P+V+T++ +
Sbjct: 366 DEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSI 425

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           +NG  K G +  A ++  EM  +G+ P+   Y T I G  K      A  +  EML +G 
Sbjct: 426 INGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGV 485

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
             +    + LV+GL K G +E+A  L R+M   G + DH+ YT++I    + G+L     
Sbjct: 486 EVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFK 545

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
           +   +  K L P  V Y V I+     G+ + A  +  EMQ  G++P+ +TYN +I    
Sbjct: 546 VGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQS 605

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
           R  +  +A  L   M+   I PN  TY+ LI     AG  ++A  L  EM      P   
Sbjct: 606 REGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSL 665

Query: 700 THSALL 705
           TH  +L
Sbjct: 666 THRRVL 671



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 154/521 (29%), Positives = 255/521 (48%), Gaps = 2/521 (0%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   V+    V ++M    + P+V   + II  L   G+  KA +  R M E GI P++V
Sbjct: 396 KAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVV 455

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY T++D   K    + AL++  EM   G   N    + L+ G  +NG++E+A  L R+M
Sbjct: 456 TYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREM 515

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
            + G+ +   +Y  +I G  + G L  A  + +E+  + + P    YN+ I  LC  G+ 
Sbjct: 516 NERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKS 575

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            +A     EM    + PD ++YNT++    R G   +A  L + ++  ++ P ++TY+TL
Sbjct: 576 KEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTL 635

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS-MAREFFNEMLRKG 483
           I GL   G +E A+ L   M + G  P  +T+  ++  +C  G  S +  E    M+  G
Sbjct: 636 IVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQ-ACSQGRRSDLILEIHEWMMNAG 694

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           L  D   Y T +      G T +A  + EEM  +G  PD IT+N L+ G  K G L+ A 
Sbjct: 695 LCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAF 754

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
               +M+  G  P+  T+ +++      G +     + N M ++G+ P+ +TY +L+  +
Sbjct: 755 STYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGY 814

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
             +     A   + EM  KG  P V TYNALI+   ++  + QA  LF +M+  G+LP  
Sbjct: 815 GKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTS 874

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
            TY IL++      N  E  +  K+M ++   P   T S++
Sbjct: 875 CTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSI 915



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 138/494 (27%), Positives = 246/494 (49%), Gaps = 4/494 (0%)

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNG---VTYNVLITGFSR 290
           M + G+    VT NT+L   C++G +  A  L  E+  RG    G   V +N L+ G+ +
Sbjct: 128 MCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALA-EVMVRGGGIGGLDVVGWNSLVDGYCK 186

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
            G++E A  +   M   G+ V    YN ++ G    G +  A ++ + M   GV P + T
Sbjct: 187 VGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVT 246

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           Y + I   C+   V DA   + EM+RK V+PD+++ + L+ G C+ G   EA+ LF E+ 
Sbjct: 247 YTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREME 306

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
                P  VTY  LID L +      +  L   ++++G++ D+I YT +++  CK G + 
Sbjct: 307 KIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKID 366

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            A++ F   L     P+   YT  I    K G+   A ++  EM  K   P+++T++ ++
Sbjct: 367 EAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSII 426

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
           +GL K G + +A + +R+M   G  P+ +TY ++I  S +        D+++ ML +G+ 
Sbjct: 427 NGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVE 486

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
                   L++     G++E A   F EM  +G+  + + Y  LI+GL +   +  A+ +
Sbjct: 487 VNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKV 546

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLD 710
             ++ E+ +LP+   Y + IN  C  G  +EA    +EM    ++PD  T++ ++  Q  
Sbjct: 547 GQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSR 606

Query: 711 KDYKVHAVEYLESL 724
           +     A++ L  +
Sbjct: 607 EGKTAKALKLLNGM 620



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 132/434 (30%), Positives = 212/434 (48%), Gaps = 2/434 (0%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           I+D L+    K   +E+   +F +M   G+L D  N   +I  L   G    A +V + +
Sbjct: 491 IVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQEL 550

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
            E  + P  V YN  ++  C  G+ +EA   L EMQ  G  P+ VTYN +I   SR G+ 
Sbjct: 551 TEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKT 610

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
            +A  L+  M +  +K +  +Y+ +I G  E G + +A  L  EM + G +PT  T+  +
Sbjct: 611 AKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRV 670

Query: 355 IYGLCKWGRVSDARHRFFE-MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           +   C  GR SD      E M+   +  DI  YNTL+   C +G   +A ++ +E+  R 
Sbjct: 671 LQA-CSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRG 729

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           + P  +T+N LI G  + G L+ A    + M+  GI P+V T+  ++ G    G +  + 
Sbjct: 730 IAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESD 789

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
              NEM ++G++P    Y   + G  K  +  EA RL  EM+ KGF P + TYN L+   
Sbjct: 790 MVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDF 849

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
            K+G + +A EL  +M   G +P   TY  ++    ++ +    R    +M  KG SP+ 
Sbjct: 850 SKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSK 909

Query: 594 VTYTVLIHAHAARG 607
            T + +  A +  G
Sbjct: 910 GTLSSISRAFSKPG 923



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 125/394 (31%), Positives = 192/394 (48%), Gaps = 4/394 (1%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V  ++    LLPD    N  I  L   G S +A      M   G+KP  VTYNTM+ +  
Sbjct: 546 VGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQS 605

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           +EG+  +AL+LL  M+     PN +TY+ LI G    G +E+A+ L+ +M   G   ++ 
Sbjct: 606 REGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSL 665

Query: 315 SYNPII--CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
           ++  ++  C    +  L+  L + E M+  G+   +  YN L+  LC  G    A     
Sbjct: 666 THRRVLQACSQGRRSDLI--LEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLE 723

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
           EM  + + PD I++N L+ G+ +SG++  AF  +D++    + P V T+NTL+ GL   G
Sbjct: 724 EMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAG 783

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
            +  +  +   M  +GI P  +TY I+V G  K  N   A   + EM+ KG  P    Y 
Sbjct: 784 RIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYN 843

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
             I+   K+G  S+A  L  EM  +G  P   TY++LV G  KL +  E  + L+ M   
Sbjct: 844 ALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEK 903

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           GF P   T +SI  A  + G     R L  N+ +
Sbjct: 904 GFSPSKGTLSSISRAFSKPGMSWEARRLLKNLYK 937



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 119/452 (26%), Positives = 207/452 (45%), Gaps = 52/452 (11%)

Query: 96  VLNRIREKPRI--ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCV 153
           ++N +++  +I  A   FR +  + GV  D   + T+++ L ++G L +A+ V + +   
Sbjct: 495 LVNGLKKNGKIEKAEALFREM-NERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEK 553

Query: 154 NMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNR 213
           N+           L   V   +    L +  K    E  L    +M   GL PD    N 
Sbjct: 554 NL-----------LPDAVVYNVFINCLCMLGKSKEAESFL---EEMQSTGLKPDQVTYNT 599

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
           +I      G + KA ++   M    IKP+++TY+T++    + G +++A  LL EM   G
Sbjct: 600 MIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSG 659

Query: 274 CSPNGVT-----------------------------------YNVLITGFSRNGELEQAR 298
            SP  +T                                   YN L+     NG   +A 
Sbjct: 660 FSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAM 719

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            ++ +M   G+     ++N +I G+ + G L  A +  ++M+  G++P +AT+N L+ GL
Sbjct: 720 VVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGL 779

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
              GR+ ++     EM ++ + P  ++Y+ L+ GY +  N  EA  L+ E+  +  +P V
Sbjct: 780 ESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKV 839

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
            TYN LI    + G +  A++L   M N+G+LP   TY I+V+G  K+ N +  R+F  +
Sbjct: 840 STYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKD 899

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
           M  KG  P +   ++      K G + EA RL
Sbjct: 900 MKEKGFSPSKGTLSSISRAFSKPGMSWEARRL 931



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 145/293 (49%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           VE+   + N+M  +G  P      R+++       S    E++  M   G+   I  YNT
Sbjct: 645 VEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNT 704

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++   C  G  ++A+ +L EM GRG +P+ +T+N LI G  ++G L+ A      ML  G
Sbjct: 705 LVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHG 764

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           +  +  ++N ++ G    G + E+  +  EM  RG+ P+  TY+IL+ G  K     +A 
Sbjct: 765 ISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAV 824

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             + EM+ K  +P + +YN L+  + + G + +A  LF+E+++R ++PT  TY+ L+ G 
Sbjct: 825 RLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGW 884

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
            +  +    ++  ++M  +G  P   T + +     K G    AR     + +
Sbjct: 885 SKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLLKNLYK 937



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 115/240 (47%)

Query: 170 CVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE 229
           C  I + + L+ +     M  + ++V  +M   G+ PD    N +I     +G    A  
Sbjct: 696 CADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFS 755

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
            Y  M   GI P++ T+NT+L      G + E+  +L EM+ RG  P+ +TY++L+TG+ 
Sbjct: 756 TYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYG 815

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           +     +A  L  +M+  G      +YN +I  +S+ G++ +A  L  EM  RGV PT  
Sbjct: 816 KQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSC 875

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           TY+IL+ G  K    ++ R    +M  K   P   + +++   + + G   EA  L   L
Sbjct: 876 TYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLLKNL 935



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 69/131 (52%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           D+L+  Y K+S   + + ++ +M+  G LP V   N +I      G   +A+E++  M  
Sbjct: 808 DILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQN 867

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G+ P+  TY+ ++  + K     E  + L +M+ +G SP+  T + +   FS+ G   +
Sbjct: 868 RGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWE 927

Query: 297 ARGLIRDMLKL 307
           AR L++++ K+
Sbjct: 928 ARRLLKNLYKV 938


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 155/504 (30%), Positives = 261/504 (51%), Gaps = 3/504 (0%)

Query: 189 VEQCLLVFNKML--RNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTY 246
           V+  +  FN +L  RN + P +   N+I+  L        A    + M    I+P + T+
Sbjct: 44  VDDAVSSFNHILHMRNPVQP-IFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTF 102

Query: 247 NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
           N +++ FC  G +  A  +L ++   G  P+ VT   LI G   NG++ +A     D++ 
Sbjct: 103 NILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIA 162

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
            G  +   SY  +I G  + G    AL +  ++    V P +  YN +I  LCK   V  
Sbjct: 163 KGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIH 222

Query: 367 ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
           A     EM+ K + PD+++Y TL+YG    G + EA  LF+++  +N+ P V T+N L+D
Sbjct: 223 ASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVD 282

Query: 427 GLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
           GLC+ G+++ A+ +   MI QG+  +++TY  +++G   +   + A   FN M R+G+ P
Sbjct: 283 GLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTP 342

Query: 487 DRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
           D  +Y+  I G  K     EA  L +EM +K   P+ +TYN L+ GL K G + +A +L+
Sbjct: 343 DVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLV 402

Query: 547 RKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAAR 606
            +M   G   D ITY+S++ A  +   + +   L   +  +G+ P + TYT+L+      
Sbjct: 403 NEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKN 462

Query: 607 GRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
           GRL+ A   + ++ +KG   +V  YN ++NGLC+    D+A  L   ME+ G +P+  TY
Sbjct: 463 GRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTY 522

Query: 667 TILINENCNAGNWQEALRLYKEML 690
             L+          +A++L +EM+
Sbjct: 523 ETLVRALFENDKNDKAVKLLREMI 546



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 142/490 (28%), Positives = 247/490 (50%), Gaps = 9/490 (1%)

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           ++P I  +N +L S  K      A+    +M+ +   P+  T+N+LI  F   G L  A 
Sbjct: 61  VQP-IFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAF 119

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            ++  + KLG      +   +I G    G + EAL+  ++++ +G      +Y  LI GL
Sbjct: 120 SVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGL 179

Query: 359 CKWGRVSDARHRFFEMLRKN----VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           CK G    A     ++LRK     V P+++ YNT++   C+   +  A  L  E+  + +
Sbjct: 180 CKTGETRAA----LQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRI 235

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P VVTY TLI G    G L+ A  L   M+ + I PDV T+ I+V+G CK G +  AR 
Sbjct: 236 FPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARN 295

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
               M+++G+  +   Y + + G   +   ++A  +   M  +G  PD+ +Y+++++GLC
Sbjct: 296 VLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLC 355

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           K   ++EA  L ++M      P+ +TY S+I   L+ G +    DL N M  +G    ++
Sbjct: 356 KTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVI 415

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           TY+ L+ A     +++ A    ++++ +GI+PN+ TY  L++GLC+  R+  A  ++ D+
Sbjct: 416 TYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDL 475

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYK 714
             +G   +   Y +++N  C  G + EAL L  +M D    PD  T+  L+    + D  
Sbjct: 476 LIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKN 535

Query: 715 VHAVEYLESL 724
             AV+ L  +
Sbjct: 536 DKAVKLLREM 545



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 137/453 (30%), Positives = 229/453 (50%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           PD+   N +I      G    A  V   + + G  P  VT  T++   C  G+++EAL  
Sbjct: 97  PDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHF 156

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
             ++  +G   + V+Y  LI G  + GE   A  ++R +  L ++ +   YN II    +
Sbjct: 157 HDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCK 216

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
             L++ A +L  EM+ + + P + TY  LIYG    GR+ +A   F +ML KN+ PD+ +
Sbjct: 217 DKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYT 276

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           +N L+ G C+ G + +A  +   +  + +   +VTYN+L+DG         A  +   M 
Sbjct: 277 FNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMA 336

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
            +G+ PDV +Y+IM+NG CK   +  A   F EM  K + P+   Y + I G LK G  S
Sbjct: 337 RRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRIS 396

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           +A+ L  EM  +G P D+ITY+ L+  LCK   +++A  L+ K+   G  P+  TYT ++
Sbjct: 397 DAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILV 456

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
               + G L+  + ++ ++L KG    +  Y V+++     G  + A    S+M+  G  
Sbjct: 457 DGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCI 516

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           P+ +TY  L+  L    + D+A  L  +M  +G
Sbjct: 517 PDAVTYETLVRALFENDKNDKAVKLLREMIVQG 549



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 147/482 (30%), Positives = 247/482 (51%), Gaps = 15/482 (3%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           A+ F + +E +  ++ D F F  ++      G L  A+ V+  +  +  H          
Sbjct: 83  AISFSKQMELKQ-IQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFH---------- 131

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
               V+I  L   L +  K   V + L   + ++  G   D  +   +I  L   G +  
Sbjct: 132 -PDTVTITTLIKGLCLNGK---VREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRA 187

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A +V R +    ++P++V YNT++DS CK+  +  A +L  EM  +   P+ VTY  LI 
Sbjct: 188 ALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIY 247

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G    G L++A GL   ML   +K   +++N ++ G  ++G + +A N+   M+ +GV  
Sbjct: 248 GCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDS 307

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
            + TYN L+ G     + + A   F  M R+ V PD+ SY+ ++ G C++  + EA  LF
Sbjct: 308 NIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLF 367

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
            E+ S+++ P  VTYN+LIDGL +YG +  A  L   M N+G   DVITY+ +++  CK 
Sbjct: 368 KEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKN 427

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
             +  A     ++  +G+QP+ + YT  + G  K G   +A  + +++L KG+  D+  Y
Sbjct: 428 HQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMY 487

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           NV+V+GLCK G  +EA  L+ KM  +G IPD +TY +++ A  E     +   L   M+ 
Sbjct: 488 NVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIV 547

Query: 587 KG 588
           +G
Sbjct: 548 QG 549



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 96/343 (27%), Positives = 178/343 (51%), Gaps = 1/343 (0%)

Query: 364 VSDARHRFFEMLR-KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           V DA   F  +L  +N +  I  +N +L    +  +   A     ++  + + P + T+N
Sbjct: 44  VDDAVSSFNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFN 103

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            LI+  C  G L  A  +   +   G  PD +T T ++ G C  G +  A  F ++++ K
Sbjct: 104 ILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAK 163

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G   D+ +Y T I G  K G+T  A ++  ++      P+++ YN ++  LCK   +  A
Sbjct: 164 GFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHA 223

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
           ++L  +M+     PD +TYT++I+  L +G L+    LFN ML K + P + T+ +L+  
Sbjct: 224 SDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDG 283

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
               G ++ A    + M  +G+  N++TYN+L++G   +++ ++A  +F  M   G+ P+
Sbjct: 284 LCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPD 343

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             +Y+I+IN  C      EA+ L+KEM  + + P+  T+++L+
Sbjct: 344 VQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLI 386



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 1/151 (0%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL    K   V++ + +  K+   G+ P++     ++  L  NG    A+ VY+ +   G
Sbjct: 420 LLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKG 479

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
               +  YN M++  CKEG   EAL L+ +M+  GC P+ VTY  L+     N + ++A 
Sbjct: 480 YHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAV 539

Query: 299 GLIRDMLKLGLKVSAH-SYNPIICGYSEKGL 328
            L+R+M+  G  V ++ S N ++C Y    L
Sbjct: 540 KLLREMIVQGSAVGSNISSNSMLCVYQAAPL 570



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 71/149 (47%)

Query: 197 NKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKE 256
           N+M   G   DV   + ++  L  N    KA  +   + + GI+P+I TY  ++D  CK 
Sbjct: 403 NEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKN 462

Query: 257 GEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSY 316
           G +++A  +  ++  +G   +   YNV++ G  + G  ++A  L+  M   G    A +Y
Sbjct: 463 GRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTY 522

Query: 317 NPIICGYSEKGLLVEALNLEEEMVTRGVA 345
             ++    E     +A+ L  EM+ +G A
Sbjct: 523 ETLVRALFENDKNDKAVKLLREMIVQGSA 551


>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
          Length = 579

 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 145/468 (30%), Positives = 247/468 (52%), Gaps = 1/468 (0%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G+KP  V+Y +M+   CK G + EA EL  +M+     P    YN +I G+   G  E A
Sbjct: 13  GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDA 72

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L+  + + G   S  S+N I+    +K  + EAL+L E M  +   P  +TYNI+I  
Sbjct: 73  YKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM-KKDAEPNSSTYNIIIDM 131

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           LC  GRV +A     EM   ++ P++++ N ++   C++  + EA+ +F+    R   P 
Sbjct: 132 LCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPD 191

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
            VTY +LIDGL + G ++ A +L E M++ G   + + YT ++      G      + F 
Sbjct: 192 CVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFK 251

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           E++R+G +PD     T +    K G+  +   + E++ + GF PD+ +Y++L+HGL K G
Sbjct: 252 ELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAG 311

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
              E + +   M   GF  D   Y +++    + G + +  ++   M  K + PT+ TY 
Sbjct: 312 QARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYG 371

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
            ++   A   RL+ A+M F E + KGI  NV+ Y++LI+G  ++ RID+AY +  +M ++
Sbjct: 372 AIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKK 431

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           G+ PN YT+  L++    A    EAL  ++ M + +  P+  T+S L+
Sbjct: 432 GLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILI 479



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 151/545 (27%), Positives = 267/545 (48%), Gaps = 36/545 (6%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
           F+++   GL PD  +   +I VL   G   +A E++  M      P    YNTM+  +  
Sbjct: 6   FHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGS 65

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
            G  ++A +LL  ++ RGC P+ V++N ++T   +  ++++A  L  +++K   + ++ +
Sbjct: 66  AGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSST 124

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           YN II      G + EA  + +EM    + P L T NI++  LCK  ++ +A   F    
Sbjct: 125 YNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESAS 184

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFD---------------------------- 407
           ++   PD ++Y +L+ G  + G + EA+ LF+                            
Sbjct: 185 QRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKE 244

Query: 408 -------ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
                  EL  R   P +   NT +D + + G++E  + + E++ + G LPDV +Y+I++
Sbjct: 245 DGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILI 304

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
           +G  K G        F+ M ++G   D  AY   + G  K G   +AY + EEM  K   
Sbjct: 305 HGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQ 364

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           P + TY  +V GL K+  L+EA  L  +    G   + + Y+S+I    ++G +     +
Sbjct: 365 PTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLI 424

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
              M++KGL+P + T+  L+ A      +  A + F  M+     PN  TY+ LINGLCR
Sbjct: 425 LEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCR 484

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
           +++ ++A+  + DM+++G++PN  TYT +I+     GN  +A  L++        PD  +
Sbjct: 485 VQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAAS 544

Query: 701 HSALL 705
            +AL+
Sbjct: 545 FNALI 549



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 156/580 (26%), Positives = 273/580 (47%), Gaps = 22/580 (3%)

Query: 106 IALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSA---YWVVETVVCVNMHGILDVL 162
           +A +FF  ++ Q G+K D+  + +++ +L ++G L  A   +  +E    V      + +
Sbjct: 1   MAWKFFHELKAQ-GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTM 59

Query: 163 IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG 222
           I G                 Y      E    +  ++   G +P V + N I+  L    
Sbjct: 60  IMG-----------------YGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKR 102

Query: 223 FSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYN 282
              +A  ++ +M +   +P+  TYN ++D  C  G ++EA  +L EM+     PN +T N
Sbjct: 103 KVDEALSLFEVMKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVN 161

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
           +++    +  +LE+A  +     + G      +Y  +I G  +KG + EA  L E+M+  
Sbjct: 162 IMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDA 221

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           G       Y  LI      GR  D    F E++R+   PD+   NT +    ++G + + 
Sbjct: 222 GHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKG 281

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
            ++F+++RS   +P V +Y+ LI GL + G       +   M  QG   D   Y  +V+G
Sbjct: 282 RMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDG 341

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            CK G +  A E   EM  K +QP    Y   + G  K+    EAY L EE  +KG   +
Sbjct: 342 FCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELN 401

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
           ++ Y+ L+ G  K+G ++EA  +L +M+  G  P+  T+ S++ A ++  ++      F 
Sbjct: 402 VVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQ 461

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
           +M      P   TY++LI+      +   AF+++ +MQ +G+ PNV+TY  +I+GL ++ 
Sbjct: 462 SMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVG 521

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
            I  AY LF   +  G +P+  ++  LI    NA    EA
Sbjct: 522 NITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEA 561



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 124/456 (27%), Positives = 208/456 (45%), Gaps = 75/456 (16%)

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
           E+  +G+ P   +Y  +I+ LCK GR+ +A   F +M  +  +P   +YNT++ GY  +G
Sbjct: 8   ELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAG 67

Query: 398 NIGEAFLLFDELRSRNLVPTVVT----------------------------------YNT 423
              +A+ L + LR R  +P+VV+                                  YN 
Sbjct: 68  RFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNI 127

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           +ID LC  G +E A ++ + M +  + P+++T  IMV+  CK   L  A + F    ++G
Sbjct: 128 IIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRG 187

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA--------------------------- 516
             PD   Y + I G  K G   EAYRL E+ML                            
Sbjct: 188 CNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGH 247

Query: 517 --------KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
                   +G  PDL   N  +  + K G +E+   +   +   GF+PD  +Y+ +IH  
Sbjct: 248 KIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGL 307

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
            + G  R   ++F+ M ++G +     Y  ++      G++  A+    EM+ K ++P V
Sbjct: 308 TKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTV 367

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
            TY A+++GL ++ R+D+AY LF + + +GI  N   Y+ LI+     G   EA  + +E
Sbjct: 368 ATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEE 427

Query: 689 MLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           M+ + + P+  T ++LL      D  V A E  E+L
Sbjct: 428 MMKKGLTPNVYTWNSLL------DALVKAEEINEAL 457



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 193/394 (48%), Gaps = 14/394 (3%)

Query: 116 TQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKI 175
           +Q G   D   +C++++ L + G +  AY + E +           L  G  ++ V    
Sbjct: 184 SQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKM-----------LDAGHNANPVVYTS 232

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
           L     I+ +K   E    +F +++R G  PD+   N  +  +   G   K R ++  + 
Sbjct: 233 LIRNFFIHGRK---EDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIR 289

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
            +G  P + +Y+ ++    K G+ +E   +   M+ +G + +   YN ++ GF ++G++ 
Sbjct: 290 SYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVH 349

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
           +A  ++ +M +  ++ +  +Y  I+ G ++   L EA  L EE  ++G+   +  Y+ LI
Sbjct: 350 KAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLI 409

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
            G  K GR+ +A     EM++K + P++ ++N+LL    ++  I EA + F  ++     
Sbjct: 410 DGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCP 469

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P   TY+ LI+GLCR      A    ++M  QG++P+V+TYT M++G  K+GN++ A   
Sbjct: 470 PNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSL 529

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
           F      G  PD  ++   I G        EAY+
Sbjct: 530 FERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 563



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/355 (29%), Positives = 174/355 (49%), Gaps = 3/355 (0%)

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
           F E+  + + PD +SY ++++  C++G +GEA  LF ++ +   VP    YNT+I G   
Sbjct: 6   FHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGS 65

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
            G  E A +L E +  +G +P V+++  ++    K   +  A   F E+++K  +P+   
Sbjct: 66  AGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSST 124

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           Y   I      G   EAYR+ +EM      P+L+T N++V  LCK   LEEA ++     
Sbjct: 125 YNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESAS 184

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
             G  PD +TY S+I    + G +     LF  ML  G +   V YT LI      GR E
Sbjct: 185 QRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKE 244

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
                F E+  +G +P++   N  ++ + +   +++   +F D+   G LP+  +Y+ILI
Sbjct: 245 DGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILI 304

Query: 671 NENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVH-AVEYLESL 724
           +    AG  +E   ++  M  +    D   ++A ++    K  KVH A E LE +
Sbjct: 305 HGLTKAGQARETSNIFHAMKQQGFALDARAYNA-VVDGFCKSGKVHKAYEILEEM 358



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 117/221 (52%), Gaps = 1/221 (0%)

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
           MA +FF+E+  +GL+PD  +YT+ I    K G   EA  L  +M A+   P    YN ++
Sbjct: 1   MAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMI 60

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
            G    G  E+A +LL ++   G IP  +++ SI+    +   +     LF  +++K   
Sbjct: 61  MGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAE 119

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           P   TY ++I      GR+E A+    EM+   + PN++T N +++ LC+ R++++AY +
Sbjct: 120 PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKI 179

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           F    + G  P+  TY  LI+     G   EA RL+++MLD
Sbjct: 180 FESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLD 220



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 93/179 (51%), Gaps = 6/179 (3%)

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A +   ++   G  PD ++YTS+I    + G L    +LF  M  +   P    Y  +I 
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
            + + GR E A+     ++ +G  P+V+++N+++  L + R++D+A  LF  M+++   P
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EP 120

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL-----LKQLDKDYKV 715
           N  TY I+I+  C  G  +EA R+  EM    + P+  T + ++      ++L++ YK+
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKI 179



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 57/95 (60%)

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
           +A+ +F E++ +G++P+ ++Y ++I  LC+  R+ +A  LF  ME E  +P  Y Y  +I
Sbjct: 1   MAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMI 60

Query: 671 NENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
               +AG +++A +L + + +R   P   + +++L
Sbjct: 61  MGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSIL 95


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 143/457 (31%), Positives = 245/457 (53%), Gaps = 3/457 (0%)

Query: 260 QEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI 319
           QE  ++L  + G     N +  ++L+  +++N          +     GLK+S  S NP+
Sbjct: 75  QEQTQILLSVSGDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPL 134

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           + G  + G + +   + +EM+ R + PTL ++NI+I GLCK G+++ A     +M  + V
Sbjct: 135 MSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGV 194

Query: 380 IPDIISYNTLLYGYCRSGNIGE---AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
             ++I+YNTL+ GYC+ G IG+   A  +  E+R+  + P  VT+N LIDG C+  ++  
Sbjct: 195 SANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSA 254

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
           A ++   M  QG+ P+V+TY  ++NG C  G ++ A    ++M+   L+P+   +   + 
Sbjct: 255 AMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLN 314

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
           G  K     +A  L ++M  +G  P++ TYN+L+   CK  ++E+A  L R M+G G  P
Sbjct: 315 GFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCP 374

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
           D  TY  +I      GDL   R+L + M  K L   L+TY +LI +   +G ++ A    
Sbjct: 375 DVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLL 434

Query: 617 SEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNA 676
            EM  KG++P+ +TYN +I+G C+   +  A  L   ME+ G L N  TY +LI   C  
Sbjct: 435 DEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKK 494

Query: 677 GNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDY 713
              ++A  L  EML++ + P+  T+  +  + ++K +
Sbjct: 495 DKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGF 531



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 135/382 (35%), Positives = 213/382 (55%), Gaps = 3/382 (0%)

Query: 194 LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
            V+ +M+R  + P + + N +I  L   G   KA ++   M   G+  +++TYNT++D +
Sbjct: 149 FVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGY 208

Query: 254 CKEGE---MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
           CK G+   M +A  +L EM+  G  PN VT+N+LI GF ++  +  A  +  +M + G+K
Sbjct: 209 CKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVK 268

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
            +  +YN +I G    G + EA  L ++MV   + P + T+N L+ G CK   V  A   
Sbjct: 269 PNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGEL 328

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
           F +M ++ + P++ +YN L+  YC+  N+ +AF L+  +  + + P V TYN LI GLCR
Sbjct: 329 FDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCR 388

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
            GDLE A+ L   M  + +  D+ITY I+++  C  G +  A    +EM RKGL+P +  
Sbjct: 389 KGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLT 448

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           Y T I G  K G+   A  L+ +M   G   ++ TYNVL+ G CK   LE+AN LL +M+
Sbjct: 449 YNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEML 508

Query: 551 GDGFIPDHITYTSIIHASLEMG 572
             G IP+ +TY  +    +E G
Sbjct: 509 EKGLIPNRMTYEIVTEEMMEKG 530



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 151/466 (32%), Positives = 239/466 (51%), Gaps = 32/466 (6%)

Query: 166 GLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSV 225
           G S C +  I+D+L+  Y K          F +    GL   V +CN ++  L   G   
Sbjct: 86  GDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIG 145

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
               VY+ M    I+P+++++N +++  CK G++ +A +++ +M+ RG S N +TYN LI
Sbjct: 146 DMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLI 205

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            G+ + G++                                G + +A  + +EM   G+ 
Sbjct: 206 DGYCKMGKI--------------------------------GKMYKADAILKEMRADGIC 233

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P   T+NILI G CK   VS A   F EM R+ V P++++YN+L+ G C +G + EA  L
Sbjct: 234 PNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATAL 293

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
            D++ +  L P ++T+N L++G C+   ++ A +L ++M  QGI P+V TY I+++  CK
Sbjct: 294 RDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCK 353

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
             N+  A   +  ML KG+ PD   Y   IAG  + GD   A  L  EM  K    DLIT
Sbjct: 354 DENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLIT 413

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           YN+L+  LC  G +++A  LL +M   G  P  +TY ++I    + G+LR   +L + M 
Sbjct: 414 YNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQME 473

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
           + G    + TY VLI     + +LE A    +EM  KG+ PN +TY
Sbjct: 474 KVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTY 519



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 112/332 (33%), Positives = 178/332 (53%), Gaps = 16/332 (4%)

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           KA  + + M   GI P+ VT+N ++D FCK+  +  A+++  EM  +G  PN VTYN LI
Sbjct: 219 KADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLI 278

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            G   NG++ +A  L   M+   LK +  ++N ++ G+ +  ++ +A  L ++M  +G+ 
Sbjct: 279 NGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGIT 338

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P + TYNILI   CK   + DA   +  ML K V PD+ +YN L+ G CR G++  A  L
Sbjct: 339 PNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNL 398

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
             E+ +++L   ++TYN LID LC  G+++ A +L + M  +G+ P  +TY  M++G CK
Sbjct: 399 VSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCK 458

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
            GNL  A    ++M + G   +   Y   I G  K     +A  L  EML KG  P+ +T
Sbjct: 459 EGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMT 518

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
           Y ++                  +M+  GF+PD
Sbjct: 519 YEIVTE----------------EMMEKGFVPD 534



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/327 (33%), Positives = 168/327 (51%), Gaps = 16/327 (4%)

Query: 170 CVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE 229
           C +    ++L+  + K   V   + VF +M R G+ P+V   N +I  L +NG   +A  
Sbjct: 233 CPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATA 292

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           +   M    +KP+I+T+N +L+ FCK   +++A EL  +M  +G +PN  TYN+LI  + 
Sbjct: 293 LRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYC 352

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           ++  +E A  L R ML  G+     +YN +I G   KG L  A NL  EM T+ +   L 
Sbjct: 353 KDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLI 412

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           TYNILI  LC  G +  A     EM RK + P  ++YNT++ GYC+ GN+  A  L  ++
Sbjct: 413 TYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQM 472

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
                +  V TYN LI G C+   LE A  L   M+ +G++P+ +TY I+          
Sbjct: 473 EKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVT--------- 523

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIA 496
                   EM+ KG  PD   +  ++A
Sbjct: 524 -------EEMMEKGFVPDIEGHLYKVA 543



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 173/344 (50%), Gaps = 3/344 (0%)

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
           I  + L++ Y ++      F  F       L  +V + N L+ GL + G++   + + + 
Sbjct: 94  IIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKE 153

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           MI + I P +I++ I++NG CK+G L+ A +   +M  +G+  +   Y T I G  K+G 
Sbjct: 154 MIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGK 213

Query: 504 TSEAYRLQ---EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
             + Y+     +EM A G  P+ +T+N+L+ G CK  ++  A ++  +M   G  P+ +T
Sbjct: 214 IGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVT 273

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           Y S+I+     G +     L + M+   L P ++T+  L++       ++ A   F +M 
Sbjct: 274 YNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMP 333

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
            +GI PNV TYN LI+  C+   ++ A+ L+  M  +G+ P+  TY  LI   C  G+ +
Sbjct: 334 KQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLE 393

Query: 681 EALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
            A  L  EM  + ++ D  T++ L+    +K     A+  L+ +
Sbjct: 394 AARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEM 437



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 90/169 (53%), Gaps = 2/169 (1%)

Query: 161 VLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRD 220
           +++G G+  C  +   + L+    +K  +E    + ++M    L  D+   N +I  L +
Sbjct: 366 IMLGKGV--CPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCN 423

Query: 221 NGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVT 280
            G   KA  +   M   G+KPS +TYNTM+D +CKEG ++ AL L  +M+  G   N  T
Sbjct: 424 KGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVAT 483

Query: 281 YNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLL 329
           YNVLI GF +  +LE A GL+ +ML+ GL  +  +Y  +     EKG +
Sbjct: 484 YNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFV 532



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/207 (23%), Positives = 93/207 (44%), Gaps = 40/207 (19%)

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
           S +E  ++L  + GD F  + I    ++ A  +    R G + F      GL  ++ +  
Sbjct: 73  STQEQTQILLSVSGDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCN 132

Query: 598 VLIHAHAARGRL-ELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA--------- 647
            L+      G + ++ F+Y  EM  + I P +I++N +INGLC++ ++++A         
Sbjct: 133 PLMSGLVKVGEIGDMEFVY-KEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKV 191

Query: 648 ---------YGLFID--------------------MEEEGILPNKYTYTILINENCNAGN 678
                    Y   ID                    M  +GI PN+ T+ ILI+  C   N
Sbjct: 192 RGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKN 251

Query: 679 WQEALRLYKEMLDREIEPDYCTHSALL 705
              A++++ EM  + ++P+  T+++L+
Sbjct: 252 VSAAMKVFAEMNRQGVKPNVVTYNSLI 278


>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
          Length = 769

 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 185/679 (27%), Positives = 291/679 (42%), Gaps = 105/679 (15%)

Query: 92  LLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVV 151
           ++V VL  +R+ P +  RFF W E Q G       +  + + L   G  R A  ++  + 
Sbjct: 107 VVVAVLGAVRDAPELCARFFLWAERQVGYSHTGACYDALADALGFDGRARDAERLLREI- 165

Query: 152 CVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNC 211
                G  D  + G        ++L++L+    +  M  + L    ++   G  P     
Sbjct: 166 -----GEEDREVLG--------RLLNVLVRRCCRGGMWNEALEELGRLKDFGYRPSKVTY 212

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL------ 265
           N +++VL   G       V + M E G      T      + CKEG   +AL++      
Sbjct: 213 NALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDF 272

Query: 266 --------------------------LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
                                     L  M+   C PN VTY  L++GF +  +L   + 
Sbjct: 273 KLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKR 332

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI---- 355
           +I  M+  G   +   +N ++  Y  +     A  L   M T G  P    YNI I    
Sbjct: 333 IINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSIC 392

Query: 356 -----------------YG--------------------LCKWGRVSDARHRFFEMLRKN 378
                            YG                    LC  G+   A     EM+RK 
Sbjct: 393 GQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKG 452

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
            +PD  +Y+ ++   C +  + +AFLLF E++   + P V TY  LID  C+ G +E AQ
Sbjct: 453 FVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQ 512

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
            L E M + G  P V+TYT +++   K   +  A + F+ M+  G +P+   Y   + G 
Sbjct: 513 WLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGL 572

Query: 499 LKLGDTSEAYRLQEEMLAKG--------FP--------PDLITYNVLVHGLCKLGSLEEA 542
            K G+ S+A+ +  +++           FP        P+++TY  LV GLCK   ++ A
Sbjct: 573 CKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHA 632

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
           +ELL  M+  G  P+HI Y ++I    + G +   +++F  M + G  P++ TYT LI  
Sbjct: 633 HELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDR 692

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
               GRL+LA    S+M      PNV+TY A+I+GLCR+   ++A  L   MEE+G  PN
Sbjct: 693 MFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPN 752

Query: 663 KYTYTILINENCNAGNWQE 681
             TYT LI+      +WQ+
Sbjct: 753 VVTYTALIDG--LGQSWQD 769



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 145/536 (27%), Positives = 238/536 (44%), Gaps = 68/536 (12%)

Query: 222 GFSVKAREVYRMMGEFGIKPSIVT---YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNG 278
           GF  +AR+  R++ E G +   V     N ++   C+ G   EALE L  ++  G  P+ 
Sbjct: 150 GFDGRARDAERLLREIGEEDREVLGRLLNVLVRRCCRGGMWNEALEELGRLKDFGYRPSK 209

Query: 279 VTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
           VTYN L+   S  G+++           LG +V                        ++E
Sbjct: 210 VTYNALVQVLSSAGQVD-----------LGFRV------------------------QKE 234

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML-RKNVIPDIISYNTLLYGYCRSG 397
           M   G      T     + LCK GR +DA     +M+ R++   D +    ++ G   + 
Sbjct: 235 MSESGFCMDRFTVGCFAHALCKEGRWADA----LDMIEREDFKLDTVLCTHMISGLMEAS 290

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
              EA      +R  + +P VVTY TL+ G  +   L   +++   M+ +G  P+   + 
Sbjct: 291 YFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFN 350

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT---QIAGELKLGDTSE---AYRLQ 511
            +V+  C   + + A +  N M   G  P    Y      I G+ KL        A ++ 
Sbjct: 351 SLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIY 410

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
            EMLA     + +        LC +G  ++A +L+++M+  GF+PD  TY+ +I      
Sbjct: 411 GEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHA 470

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
             + +   LF  M   G++P + TYT+LI +    G +E A   F EM+  G  P V+TY
Sbjct: 471 TKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTY 530

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML- 690
            ALI+   + +++ QA  +F  M + G  PN  TY  L++  C AGN  +A  +Y +++ 
Sbjct: 531 TALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIG 590

Query: 691 --------------DRE-IEPDYCTHSALLLKQLDKDYKV-HAVEYLES-LTLGAE 729
                         DR  + P+  T+ A L+  L K +KV HA E L++ L+ G E
Sbjct: 591 TSDSADSDFYFPCEDRHTLAPNVVTYGA-LVDGLCKAHKVDHAHELLDAMLSSGCE 645



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 139/579 (24%), Positives = 216/579 (37%), Gaps = 131/579 (22%)

Query: 257 GEMQEALEL-----LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKV 311
           G +++A EL     LW  +  G S  G  Y+ L      +G    A  L+R++ +   +V
Sbjct: 113 GAVRDAPELCARFFLWAERQVGYSHTGACYDALADALGFDGRARDAERLLREIGEEDREV 172

Query: 312 SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI---------------- 355
                N ++      G+  EAL     +   G  P+  TYN L+                
Sbjct: 173 LGRLLNVLVRRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQ 232

Query: 356 -------------------YGLCKWGRVSDA----------------------------- 367
                              + LCK GR +DA                             
Sbjct: 233 KEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYF 292

Query: 368 --RHRFFEMLRKN-VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
                F   +R N  IP++++Y TLL G+ +   +G    + + + +    P    +N+L
Sbjct: 293 DEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSL 352

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS--------------------- 463
           +   C   D   A +L   M   G  P  + Y I + GS                     
Sbjct: 353 VHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFI-GSICGQEKLPSPDLLDLAEKIYG 411

Query: 464 ---------------------CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
                                C +G    A +   EM+RKG  PD   Y+  I       
Sbjct: 412 EMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHAT 471

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
              +A+ L +EM   G  PD+ TY +L+   CK G +E+A  L  +M   G  P  +TYT
Sbjct: 472 KVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYT 531

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF--------- 613
           ++IHA L+   + +  D+F+ M+  G  P  VTY  L+      G +  AF         
Sbjct: 532 ALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGT 591

Query: 614 -------MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
                   YF       + PNV+TY AL++GLC+  ++D A+ L   M   G  PN   Y
Sbjct: 592 SDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVY 651

Query: 667 TILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             LI+  C AG    A  ++ +M      P   T+++L+
Sbjct: 652 DALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLI 690



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/330 (25%), Positives = 145/330 (43%), Gaps = 31/330 (9%)

Query: 84  QAVVSDPELLVRVLNRIREKPRIALRFFRWVETQ-PGVKRDEFVFCTILEILIESGLLRS 142
           +  V D     +V+  +    ++   F  + E +  GV  D + +  +++   ++GL+  
Sbjct: 451 KGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQ 510

Query: 143 AYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRN 202
           A W+ E +  V            G S   ++     L+  Y K   V Q   +F++M+  
Sbjct: 511 AQWLFEEMRSV------------GCSP--TVVTYTALIHAYLKAKQVPQANDIFHRMVDA 556

Query: 203 GLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMG---------------EFGIKPSIVTY 246
           G  P+      ++  L   G   KA EVY +++G                  + P++VTY
Sbjct: 557 GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 616

Query: 247 NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
             ++D  CK  ++  A ELL  M   GC PN + Y+ LI GF + G+++ A+ +   M K
Sbjct: 617 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 676

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
            G   S H+Y  +I    + G L  A+ +  +M+     P + TY  +I GLC+ G    
Sbjct: 677 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 736

Query: 367 ARHRFFEMLRKNVIPDIISYNTLLYGYCRS 396
           A      M  K   P++++Y  L+ G  +S
Sbjct: 737 ALKLLSLMEEKGCSPNVVTYTALIDGLGQS 766


>gi|242038895|ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
 gi|241920696|gb|EER93840.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
          Length = 1090

 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 157/559 (28%), Positives = 271/559 (48%), Gaps = 36/559 (6%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K SM+   L +   +   G+  +   C  +I      G   KA+++ + M E GI P 
Sbjct: 339 YCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLEDGIDPD 398

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY--------------------- 281
           +VTY+ +++  C+  +M E  E+L  MQ  G  PN V Y                     
Sbjct: 399 VVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHFV 458

Query: 282 --------------NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKG 327
                         N L+  F R G + +A    + M ++ +  ++ S+N II  Y  +G
Sbjct: 459 DIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRG 518

Query: 328 LLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYN 387
            +VEA ++ ++MV  G +P + TY  L+ GLC+ G +  A+   F +L      D  ++N
Sbjct: 519 KIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFN 578

Query: 388 TLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
            LL G C+ G + EA  + +++   N +P + TY  L+ G CR G +  A  + + M+ +
Sbjct: 579 ALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEK 638

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEML-RKGLQPDRFAYTTQIAGELKLGDTSE 506
           G++PD + YT ++NG    G +  A   F E++ ++GL  D  AY + + G LK G+ + 
Sbjct: 639 GVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNT 698

Query: 507 AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
             R+  +M      P+  +YN+L+HG  K G   ++  L + MV  G  PD++TY  +I 
Sbjct: 699 IKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLIL 758

Query: 567 ASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRP 626
              E G +         M+ +G+ P  + + +LI + + + ++  A   F+ M+   + P
Sbjct: 759 GLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSP 818

Query: 627 NVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLY 686
           +  T++A+INGL R   +DQ++ +  +M + G+ PN   Y  L+N  C  G    A RL 
Sbjct: 819 SSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLK 878

Query: 687 KEMLDREIEPDYCTHSALL 705
           +EM    I P     S+++
Sbjct: 879 EEMKAIGIVPAEVAESSII 897



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 158/566 (27%), Positives = 282/566 (49%), Gaps = 37/566 (6%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +   ML +G+ PDV   + +I  +       + +E+   M + GI P+ V Y T++  +C
Sbjct: 386 ILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYC 445

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K G ++ AL+   ++  RG   N V +N L+  F R G + +A    + M ++ +  ++ 
Sbjct: 446 KAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSV 505

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF-- 372
           S+N II  Y  +G +VEA ++ ++MV  G +P + TY  L+ GLC+ G +  A+   F  
Sbjct: 506 SFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCL 565

Query: 373 ---------------------------------EMLRKNVIPDIISYNTLLYGYCRSGNI 399
                                            +M++ N +PDI +Y  LL G+CR G I
Sbjct: 566 LDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKI 625

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI-NQGILPDVITYTI 458
             A ++   +  + +VP  V Y  L++GL   G ++ A  + + +I  +G+  D I Y  
Sbjct: 626 LPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNS 685

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           ++NG  K GN++  +   ++M +  + P+  +Y   + G +K G  S++  L + M+ KG
Sbjct: 686 LMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKG 745

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
             PD +TY +L+ GL + G ++ A + L KMV +G  PD + +  +I +  E   +    
Sbjct: 746 IRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNAL 805

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
            LFN M    LSP+  T++ +I+    +  L+ +     EM   G++PN   Y AL+N  
Sbjct: 806 RLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAK 865

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
           CR+  ID+A+ L  +M+  GI+P +   + +I   C  G  +EA+ ++  M+   + P  
Sbjct: 866 CRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTV 925

Query: 699 CTHSALLLKQLDKDYKVHAVEYLESL 724
            T +  L+  L K+ K+    +L+ L
Sbjct: 926 ATFTT-LMHSLCKESKIADALHLKRL 950



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 144/528 (27%), Positives = 263/528 (49%), Gaps = 1/528 (0%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  Y K   V+  L  F  + R GL+ +    N +++     G   +A    + M    
Sbjct: 440 LICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMN 499

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           I  + V++N ++DS+C  G++ EA  +  +M   G SPN  TY  L+ G  + G L QA+
Sbjct: 500 ISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAK 559

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
             +  +L +   V   ++N ++ G  + G L EAL++ E+MV     P + TY IL+ G 
Sbjct: 560 QFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGF 619

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR-NLVPT 417
           C+ G++  A      ML K V+PD ++Y  LL G    G +  A  +F E+  +  L   
Sbjct: 620 CRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYAD 679

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
            + YN+L++G  + G++   +++  +M    + P+  +Y I+++G  K G  S +   + 
Sbjct: 680 CIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYK 739

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            M+RKG++PD   Y   I G  + G    A +  E+M+ +G  PD + +++L+    +  
Sbjct: 740 YMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKS 799

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            +  A  L   M      P   T++++I+  +    L +  ++ + ML+ GL P    Y 
Sbjct: 800 KMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYI 859

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
            L++A    G ++ AF    EM+  GI P  +  +++I GLCR  ++++A  +F +M   
Sbjct: 860 ALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRS 919

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           G++P   T+T L++  C      +AL L + M    ++ D  +++ L+
Sbjct: 920 GMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLKVDVVSYNVLI 967



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 151/555 (27%), Positives = 276/555 (49%), Gaps = 10/555 (1%)

Query: 182 IYTKKSMVEQ---------CLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR 232
           IYT   M+++           L+  +M ++ L PD    N +I      G    AR V+ 
Sbjct: 224 IYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTYNTLINGFFGEGKINHARCVFN 283

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
            M    + PS+ TY TM+D +C+   + +AL +L EM+  G  P+ +TY+ L+ G+ +  
Sbjct: 284 HMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTYSALLNGYCKVS 343

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
            L  A  L+ D+   G+ ++      +I G+ + G + +A  + + M+  G+ P + TY+
Sbjct: 344 MLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYS 403

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
            LI G+C+  ++ + +     M +  ++P+ + Y TL+  YC++G +  A   F ++  R
Sbjct: 404 ALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRR 463

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
            LV   V +N L+    R G +  A+  ++ M    I  + +++  +++  C  G +  A
Sbjct: 464 GLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEA 523

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
              +++M+R G  P+   Y   + G  + G   +A +    +L      D  T+N L+ G
Sbjct: 524 FSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLG 583

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           +CK G+L+EA ++  KMV +  +PD  TYT ++      G +     +   ML KG+ P 
Sbjct: 584 ICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPD 643

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVK-GIRPNVITYNALINGLCRLRRIDQAYGLF 651
            V YT L++     G+++ A   F E+  K G+  + I YN+L+NG  +   ++    + 
Sbjct: 644 TVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMM 703

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDK 711
            DM +  + PN  +Y IL++     G + ++L LYK M+ + I PD  T+  L+L   + 
Sbjct: 704 SDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSEC 763

Query: 712 DYKVHAVEYLESLTL 726
                AV++LE + L
Sbjct: 764 GLIDIAVKFLEKMVL 778



 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 164/612 (26%), Positives = 291/612 (47%), Gaps = 45/612 (7%)

Query: 101 REKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILD 160
           +   ++AL+    +  + G+ R  +++C  + ILI++ +   A  V++ +          
Sbjct: 10  KSDGKLALKILNSIVERSGLDRITYIYCMAVRILIQAQMHSQAMSVLKHLAVT------- 62

Query: 161 VLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRD 220
                G S                       C  +F  +LR  ++    + N ++  L  
Sbjct: 63  -----GFS-----------------------CTAIFTSLLR--IISRFDSTNHVVFELLI 92

Query: 221 NGFSVKAREVYR------MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGC 274
             + VK R+V         M + G K S V  N++L +  +EGE +     L E   R  
Sbjct: 93  KAY-VKERKVLDAAVAVFFMDDCGFKASPVACNSILKALVEEGESKYVWLFLRESLARKF 151

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
             +  T N+L+     NGE  +A  +++ M    L  SA +YN I+  Y +KG    AL 
Sbjct: 152 PLDVTTCNILLNSLCTNGEFRKAEDMLQKMKSCCLSNSA-TYNTILHWYVKKGRFKAALC 210

Query: 335 LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
           + E+M    +   + TYNI+I  LC+  R + A      M + ++ PD  +YNTL+ G+ 
Sbjct: 211 VLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTYNTLINGFF 270

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
             G I  A  +F+ +  + LVP+V TY T+IDG CR   ++ A  +   M   G++P  +
Sbjct: 271 GEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSEL 330

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
           TY+ ++NG CK+  L  A +   ++  +G+  ++   T  I G  ++G+ S+A ++ + M
Sbjct: 331 TYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSM 390

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
           L  G  PD++TY+ L++G+C++  + E  E+L +M   G +P+ + YT++I    + G +
Sbjct: 391 LEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYV 450

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
           +     F ++ R+GL    V +  L+ A    G +  A  +   M    I  N +++N +
Sbjct: 451 KVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCI 510

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           I+  C   +I +A+ ++ DM   G  PN  TY  L+   C  G+  +A +    +LD   
Sbjct: 511 IDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPS 570

Query: 695 EPDYCTHSALLL 706
             D  T +ALLL
Sbjct: 571 AVDEKTFNALLL 582



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 142/520 (27%), Positives = 261/520 (50%), Gaps = 7/520 (1%)

Query: 183  YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
            Y  +  + +   V++ M+R G  P+V     +++ L   G  V+A++    + +    PS
Sbjct: 514  YCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDI---PS 570

Query: 243  IV---TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
             V   T+N +L   CK G + EAL++  +M    C P+  TY +L++GF R G++  A  
Sbjct: 571  AVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALV 630

Query: 300  LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR-GVAPTLATYNILIYGL 358
            +++ ML+ G+     +Y  ++ G   +G +  A  + +E++ + G+      YN L+ G 
Sbjct: 631  MLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGY 690

Query: 359  CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
             K G V+  +    +M +  V P+  SYN L++GY + G   ++  L+  +  + + P  
Sbjct: 691  LKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDN 750

Query: 419  VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
            VTY  LI GL   G +++A +  E M+ +GI PD + + I++    +   +  A   FN 
Sbjct: 751  VTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNC 810

Query: 479  MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
            M    L P    ++  I G ++     +++ +  EML  G  P+   Y  LV+  C++G 
Sbjct: 811  MKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGE 870

Query: 539  LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
            ++ A  L  +M   G +P  +  +SII      G L     +F+NM+R G+ PT+ T+T 
Sbjct: 871  IDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTT 930

Query: 599  LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
            L+H+     ++  A      M++  ++ +V++YN LI GLC+ + I  A  L+ +M+ +G
Sbjct: 931  LMHSLCKESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEMKSKG 990

Query: 659  ILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
            + PN  TY  L     + G  Q    L +++ +R + P +
Sbjct: 991  LWPNVTTYITLTGAMYSTGRMQNGEELLEDIEERGLIPAF 1030



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/392 (24%), Positives = 183/392 (46%), Gaps = 22/392 (5%)

Query: 117  QPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVC--------VNMHGILDVLIGGGLS 168
            + GV  D   +  +L  LI  G +++A +V + ++C        +  + +++  + GG  
Sbjct: 637  EKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNV 696

Query: 169  SCVSIKILDL--------------LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRI 214
            + +   + D+              L+  Y K+    + L ++  M+R G+ PD      +
Sbjct: 697  NTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLL 756

Query: 215  IKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGC 274
            I  L + G    A +    M   GI P  + ++ ++ SF ++ +M  AL L   M+    
Sbjct: 757  ILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHL 816

Query: 275  SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
            SP+  T++ +I G  R   L+Q+  ++ +ML++GL+ +   Y  ++      G +  A  
Sbjct: 817  SPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFR 876

Query: 335  LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
            L+EEM   G+ P     + +I GLC+ G++ +A   F  M+R  ++P + ++ TL++  C
Sbjct: 877  LKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLC 936

Query: 395  RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
            +   I +A  L   +    L   VV+YN LI GLC+   +  A  L   M ++G+ P+V 
Sbjct: 937  KESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNVT 996

Query: 455  TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
            TY  +       G +    E   ++  +GL P
Sbjct: 997  TYITLTGAMYSTGRMQNGEELLEDIEERGLIP 1028


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  255 bits (652), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 153/498 (30%), Positives = 241/498 (48%), Gaps = 35/498 (7%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V   M   G   D  NCN ++  + + G   +A  + R +  FG +  IV+YN +L   C
Sbjct: 168 VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLC 227

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
                 +  EL+ EM    C+PN VT+N LI    RNG  E+   ++  M       S H
Sbjct: 228 MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQM-------SEH 280

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
                                       G  P +  Y  +I G+CK G +  A      M
Sbjct: 281 ----------------------------GCTPDIRMYATIIDGICKEGHLEVANEILNRM 312

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
               + P+++ YNT+L G C +    EA  L  E+  ++     VT+N L+D  C+ G +
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLV 372

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           +   +L E M++ G +PDVITYT ++NG CK G +  A      M   G +P+  +YT  
Sbjct: 373 DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIV 432

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           + G    G   +A  L  +M+ +G PP+ +T+N L++ LCK G +E+A ELL++M+ +G 
Sbjct: 433 LKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            PD I+Y+++I    + G      +L N M+ KG+SP  + Y+ +  A +  GR+     
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQ 552

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F  ++   IR + + YNA+I+ LC+    D+A   F  M   G +PN+ TYT+LI    
Sbjct: 553 MFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLA 612

Query: 675 NAGNWQEALRLYKEMLDR 692
           + G  +EA  L  E+  R
Sbjct: 613 SEGLAKEAQELLSELCSR 630



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 199/388 (51%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           +I   + L+    +  + E+   V  +M  +G  PD++    II  +   G    A E+ 
Sbjct: 250 NIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEIL 309

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M  +G+KP++V YNT+L   C     +EA ELL EM  + C  + VT+N+L+  F +N
Sbjct: 310 NRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQN 369

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G +++   L+  ML  G      +Y  +I G+ ++GL+ EA+ L + M + G  P   +Y
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSY 429

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
            I++ GLC  GR  DA     +M+++   P+ +++NTL+   C+ G + +A  L  ++  
Sbjct: 430 TIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLV 489

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
               P +++Y+T+IDGL + G  E A +L   M+N+GI P+ I Y+ +     + G ++ 
Sbjct: 490 NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNK 549

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
             + F+ +    ++ D   Y   I+   K  +T  A      M++ G  P+  TY +L+ 
Sbjct: 550 VIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIK 609

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHI 559
           GL   G  +EA ELL ++   G +  H+
Sbjct: 610 GLASEGLAKEAQELLSELCSRGALRKHL 637



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/410 (25%), Positives = 181/410 (44%), Gaps = 3/410 (0%)

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +YN ++ GY   G   +            V P   T+  ++ GLC  GR++DA     EM
Sbjct: 81  AYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEM 137

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
             K   P    Y+ +L   CRSG    +  + + + ++         N +++ +C  G +
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCV 197

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A  L   +   G   D+++Y  ++ G C         E  +EM+R    P+   + T 
Sbjct: 198 DEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I    + G     + +  +M   G  PD+  Y  ++ G+CK G LE ANE+L +M   G 
Sbjct: 258 IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGL 317

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            P+ + Y +++         +   +L + M +K      VT+ +L+      G ++    
Sbjct: 318 KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIE 377

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
              +M   G  P+VITY  +ING C+   ID+A  L   M   G  PN  +YTI++   C
Sbjct: 378 LLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLC 437

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           +AG W +A  L  +M+ +   P+  T + L+     K     A+E L+ +
Sbjct: 438 SAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQM 487


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 147/494 (29%), Positives = 249/494 (50%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           +L     P     N+I+  L        A  +++ M   GI+    T+N +++ F + G 
Sbjct: 52  LLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGL 111

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
              +  +  ++  +G  P  +T+N LI G    G + QA      ++  G  +   SY  
Sbjct: 112 NSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGT 171

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           +I G  + G +  AL L + +  + V P    YN++I  +CK   V+DA   + +M+ K 
Sbjct: 172 LINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKR 231

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
           + PD+ +YN L+ G+     +  A  LF++++  N+ P V T+N L+DG C+ G +  A+
Sbjct: 232 ICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAK 291

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
            +   M+   I PDV+TY  +++G C +  ++ A++ F+ M   G+  +   YTT + G 
Sbjct: 292 VVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGF 351

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
            K+    EA  L EEM  +   P+++TY+ L+ GLCKLG +  A +L+ +M   G  P+ 
Sbjct: 352 CKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNI 411

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
           +TY+SI+ A  +   + +   L  N+  +G+ P + TYT+LI      GRLE A   F +
Sbjct: 412 VTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFED 471

Query: 619 MQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGN 678
           + VKG   +V  Y  +I G C     D+A  L   ME+ G +PN  TY ++I        
Sbjct: 472 LLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDE 531

Query: 679 WQEALRLYKEMLDR 692
              A +L +EM+ R
Sbjct: 532 NDTAEKLLREMIVR 545



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 135/463 (29%), Positives = 242/463 (52%)

Query: 198 KMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG 257
           +M  NG+  D    N +I      G +  +  ++  + + G  P+ +T+NT++   C +G
Sbjct: 86  QMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKG 145

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
            + +AL    ++  +G   + V+Y  LI G  + G +  A  L++ +    ++ +A  YN
Sbjct: 146 HIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYN 205

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            II    +  L+ +A +L  +MV + + P + TYN LI G     +++ A   F +M ++
Sbjct: 206 MIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKE 265

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
           N+ P++ ++N L+ G+C+ G + +A ++   +   ++ P VVTYN+L+DG C    +  A
Sbjct: 266 NINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKA 325

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
           + + ++M + G++ +V  YT MVNG CK+  +  A   F EM  + + P+   Y++ I G
Sbjct: 326 KDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDG 385

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
             KLG    A +L +EM  +G PP+++TY+ ++  LCK   +++A  LL  +   G  PD
Sbjct: 386 LCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPD 445

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
             TYT +I    + G L   +++F ++L KG +  +  YTV+I     +G  + A    S
Sbjct: 446 MYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLS 505

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
           +M+  G  PN  TY  +I  L      D A  L  +M   G+L
Sbjct: 506 KMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGLL 548



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 120/450 (26%), Positives = 232/450 (51%)

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
           +P    +N +++   +      A  L + M   G++    ++N +I  +S+ GL   + +
Sbjct: 58  TPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFS 117

Query: 335 LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
           +  +++ +G  PT  T+N LI GLC  G +  A H   +++ +    D +SY TL+ G C
Sbjct: 118 IFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLC 177

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
           + G I  A  L   +  + + P  V YN +ID +C+   +  A  L   M+ + I PDV 
Sbjct: 178 KVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVF 237

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
           TY  +++G   +  L+ A + FN+M ++ + P+ + +   + G  K G  ++A  +   M
Sbjct: 238 TYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIM 297

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
           +     PD++TYN L+ G C +  + +A ++   M   G I +   YT++++   ++  +
Sbjct: 298 MKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMV 357

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
               +LF  M  + + P +VTY+ LI      GR+  A     EM  +G  PN++TY+++
Sbjct: 358 DEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSI 417

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           ++ LC+   +D+A  L  +++++GI P+ YTYTILI   C +G  ++A  +++++L +  
Sbjct: 418 LDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGY 477

Query: 695 EPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
             D   ++ ++    DK +   A+  L  +
Sbjct: 478 NLDVYAYTVMIQGFCDKGFFDKALALLSKM 507



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 124/430 (28%), Positives = 219/430 (50%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F K+L+ G  P     N +IK L   G   +A   +  +   G     V+Y T+++  C
Sbjct: 118 IFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLC 177

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K G +  AL+LL  + G+   PN V YN++I    +   +  A  L   M+   +     
Sbjct: 178 KVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVF 237

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +YN +I G+S    L  A++L  +M    + P + T+NIL+ G CK G+V+DA+     M
Sbjct: 238 TYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIM 297

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           ++ ++ PD+++YN+L+ GYC    + +A  +FD + S  ++  V  Y T+++G C+   +
Sbjct: 298 MKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMV 357

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A  L E M  + I+P+V+TY+ +++G CK+G +  A +  +EM  +G  P+   Y++ 
Sbjct: 358 DEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSI 417

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           +    K     +A  L   +  +G  PD+ TY +L+ GLC+ G LE+A  +   ++  G+
Sbjct: 418 LDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGY 477

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
             D   YT +I    + G   +   L + M   G  P   TY ++I +   +   + A  
Sbjct: 478 NLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEK 537

Query: 615 YFSEMQVKGI 624
              EM V+G+
Sbjct: 538 LLREMIVRGL 547



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 187/382 (48%), Gaps = 2/382 (0%)

Query: 324 SEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
            E+  L+ + N    ++ +   P    +N ++  L K    S A     +M    +  D 
Sbjct: 39  DEENNLISSFN--HLLLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDF 96

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
            ++N L+  + + G    +F +F ++  +   PT +T+NTLI GLC  G +  A    + 
Sbjct: 97  FTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDK 156

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           ++ QG   D ++Y  ++NG CK+G ++ A +    +  K +QP+   Y   I    K   
Sbjct: 157 VVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKL 216

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
            ++A+ L  +M+AK   PD+ TYN L+ G   +  L  A +L  KM  +   P+  T+  
Sbjct: 217 VNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNI 276

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           ++    + G +   + +   M++  + P +VTY  L+  + +  ++  A   F  M   G
Sbjct: 277 LVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGG 336

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
           +  NV  Y  ++NG C+++ +D+A  LF +M    I+PN  TY+ LI+  C  G    AL
Sbjct: 337 VIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYAL 396

Query: 684 RLYKEMLDREIEPDYCTHSALL 705
           +L  EM DR   P+  T+S++L
Sbjct: 397 KLVDEMHDRGQPPNIVTYSSIL 418



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 162/349 (46%), Gaps = 35/349 (10%)

Query: 170 CVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE 229
           C  +   + L+  ++  S +   + +FNKM +  + P+V   N ++      G    A+ 
Sbjct: 233 CPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKV 292

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           V  +M +  IKP +VTYN+++D +C   ++ +A ++   M   G   N   Y  ++ GF 
Sbjct: 293 VLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFC 352

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           +   ++                                   EA+NL EEM  R + P + 
Sbjct: 353 KIKMVD-----------------------------------EAINLFEEMRCRKIIPNVV 377

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           TY+ LI GLCK GR+  A     EM  +   P+I++Y+++L   C++ ++ +A  L   L
Sbjct: 378 TYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNL 437

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
           + + + P + TY  LI GLC+ G LE AQ + E+++ +G   DV  YT+M+ G C  G  
Sbjct: 438 KDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFF 497

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
             A    ++M   G  P+   Y   I    +  +   A +L  EM+ +G
Sbjct: 498 DKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRG 546



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 117/223 (52%), Gaps = 2/223 (0%)

Query: 158 ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
           I D +  GG+ +  +++I   ++  + K  MV++ + +F +M    ++P+V   + +I  
Sbjct: 328 IFDSMASGGVIA--NVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDG 385

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
           L   G    A ++   M + G  P+IVTY+++LD+ CK   + +A+ LL  ++ +G  P+
Sbjct: 386 LCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPD 445

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
             TY +LI G  ++G LE A+ +  D+L  G  +  ++Y  +I G+ +KG   +AL L  
Sbjct: 446 MYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLS 505

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
           +M   G  P   TY ++I  L +      A     EM+ + ++
Sbjct: 506 KMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGLL 548


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  255 bits (651), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 142/445 (31%), Positives = 231/445 (51%)

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           T   ++ ++ +  +  +A +L  + +   CSP    +  LI     +GE E+A  + + +
Sbjct: 32  TLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKL 91

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           ++ G ++   +YN +I  +   G L  A+ +  EM  +G  P   TY  L+  L K GRV
Sbjct: 92  VQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRV 151

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            +AR  F  ML + + P+I +YN L+  + + G +  A  LF E++ R   P+VVTYN L
Sbjct: 152 QEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNIL 211

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           +D LC  G +  A++L   M   G  PD  TY+ +VNG  K G +  A + F EM+ +G+
Sbjct: 212 LDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGV 271

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
             D   Y + +A   K G+    ++L +EM  KGF PD  ++N ++  L K    + A E
Sbjct: 272 AVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAARE 331

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           +  +MV  G  PD I+Y  +I +    GD  + R +   M+  G  P   TY  LIH  A
Sbjct: 332 VFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLA 391

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
             G+++ AF    EM+  G RP+V+TYN L++ L +     +A  LF  M+++G+ P+  
Sbjct: 392 TDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTL 451

Query: 665 TYTILINENCNAGNWQEALRLYKEM 689
           +Y + I+         EAL L+K+M
Sbjct: 452 SYAVRIDGLAFDDRLDEALVLFKDM 476



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 143/480 (29%), Positives = 243/480 (50%), Gaps = 3/480 (0%)

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGE---FGIKPSIVTYNTMLDSFCKEGEMQEALELLWE 268
           N ++K++   G   K+ + + +  +   F   P++  +  ++D     GE + A  +  +
Sbjct: 31  NTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKK 90

Query: 269 MQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
           +  +GC  +   YNVLI  F R+G+L+ A  + R+M   G +   ++Y  ++    + G 
Sbjct: 91  LVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGR 150

Query: 329 LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNT 388
           + EA +  + M+ RG+ P + TYN+L+    K G++  A   F EM R+   P +++YN 
Sbjct: 151 VQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNI 210

Query: 389 LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
           LL   C +G +G A  LF ++      P   TY+TL++GL + G +E A ++   M+++G
Sbjct: 211 LLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRG 270

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
           +  D++ Y  ++    K GN+    +   EM RKG  PD F++ T +    K      A 
Sbjct: 271 VAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAR 330

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
            +   M+  G  PDLI+YN+L+    + G   +A ++L +MV  GFIP+  TY S+IH  
Sbjct: 331 EVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWL 390

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
              G +     +   M   G  P +VTY  L+     RG  + A   F +M+ KG+ P+ 
Sbjct: 391 ATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDT 450

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
           ++Y   I+GL    R+D+A  LF DM+  G   +K  Y ILI     AG+ +   +L  E
Sbjct: 451 LSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQLKHE 510



 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 141/462 (30%), Positives = 234/462 (50%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  Y + +       +FN+       P V    ++I +L ++G   +A  VY+ + + G
Sbjct: 36  LITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKG 95

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
            +     YN ++  F + G++  A+E+  EM+ +G  P+  TY  L+    + G +++AR
Sbjct: 96  CQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEAR 155

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
                ML+ GL  +  +YN ++  + + G L  AL L  EM  RG  P++ TYNIL+  L
Sbjct: 156 SFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDAL 215

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C  GRV  AR  F +M      PD  +Y+TL+ G  +SG + EA  +F E+  R +   +
Sbjct: 216 CSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDL 275

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           V YN+L+  L + G+++   +L + M  +G  PD  ++  +++   K      ARE F  
Sbjct: 276 VNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFAR 335

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M+  G +PD  +Y   I    + GD ++A ++ EEM+  GF P+  TYN L+H L   G 
Sbjct: 336 MVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQ 395

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           ++EA  +L +M   G  PD +TY  ++    + G+ +R   LF  M  KG+ P  ++Y V
Sbjct: 396 VDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAV 455

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
            I   A   RL+ A + F +M+  G   +   Y  LI    R
Sbjct: 456 RIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHR 497



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 135/440 (30%), Positives = 220/440 (50%), Gaps = 4/440 (0%)

Query: 265 LLWEM--QGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
           LL EM  +GR   PN  T   LIT + R  +   A  L           + H++  +I  
Sbjct: 17  LLKEMVAEGRPLRPN--TLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDI 74

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
               G    A  + +++V +G       YN+LI    + G++  A   F EM  K   PD
Sbjct: 75  LVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPD 134

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
             +Y  L+    ++G + EA   FD +  R L P + TYN L+D   + G L++A  L  
Sbjct: 135 EYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFA 194

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            M  +G  P V+TY I+++  C  G +  AR+ F++M   G  PD + Y+T + G  K G
Sbjct: 195 EMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSG 254

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
              EA+++  EM+ +G   DL+ YN L+  L K G+++   +L+++M   GF PD  ++ 
Sbjct: 255 RVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFN 314

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
           +I+ A  +       R++F  M+  G  P L++Y +LI ++A  G    A     EM   
Sbjct: 315 TIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEA 374

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
           G  P   TYN+LI+ L    ++D+A+ +  +ME  G  P+  TY  L++     G  Q A
Sbjct: 375 GFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRA 434

Query: 683 LRLYKEMLDREIEPDYCTHS 702
            RL+++M D+ +EPD  +++
Sbjct: 435 ARLFQQMKDKGVEPDTLSYA 454



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 131/437 (29%), Positives = 208/437 (47%), Gaps = 23/437 (5%)

Query: 126 VFCTILEILIESGLLRSAYWVVETVV---CVNMHGILDVLI-----GGGLSSCVSI---- 173
            F  +++IL+ SG    A  V + +V   C       +VLI      G L S + +    
Sbjct: 67  AFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREM 126

Query: 174 KI---------LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS 224
           KI            L+    K   V++    F+ ML  GL P++   N ++   R  G  
Sbjct: 127 KIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQL 186

Query: 225 VKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVL 284
             A  ++  M   G +PS+VTYN +LD+ C  G +  A +L  +M G GCSP+  TY+ L
Sbjct: 187 DMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTL 246

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           + G  ++G +E+A  + R+M+  G+ V   +YN ++   ++ G +     L +EM  +G 
Sbjct: 247 VNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGF 306

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
            P   ++N ++  L K  +   AR  F  M+     PD+ISYN L+  Y R G+  +A  
Sbjct: 307 HPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQ 366

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
           + +E+     +P   TYN+LI  L   G ++ A  + E M   G  PDV+TY  +++   
Sbjct: 367 MLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLG 426

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT-SEAYRLQEEMLAKGFPPDL 523
           K G    A   F +M  KG++PD  +Y  +I G L   D   EA  L ++M A G P D 
Sbjct: 427 KRGENQRAARLFQQMKDKGVEPDTLSYAVRIDG-LAFDDRLDEALVLFKDMKAVGCPVDK 485

Query: 524 ITYNVLVHGLCKLGSLE 540
             Y +L+    + G  E
Sbjct: 486 AMYRILIRAAHRAGDTE 502


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  255 bits (651), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 144/459 (31%), Positives = 233/459 (50%), Gaps = 10/459 (2%)

Query: 238 GIKPSIVT--YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
           G++PS        ++   C  G   EA  +L       C P+ + YN ++ G+   G+L+
Sbjct: 87  GLEPSAAPGPCAALIKKLCASGRTAEARRVLA-----ACEPDVMAYNAMVAGYCVTGQLD 141

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
            AR L+ DM    ++  +++YN +I G   +G    AL + ++M+ RG  P + TY IL+
Sbjct: 142 AARRLVADM---PMEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILL 198

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
              CK      A     EM  K   PDII+YN ++ G C+ G + +A      L S    
Sbjct: 199 EATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCE 258

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P  V+YN ++ GLC     E A++L   M  +G  P+V+T+ ++++  C+ G +  A E 
Sbjct: 259 PNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEV 318

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
            +++ + G  P+  +Y   +    K      A    E M+++G  PD+++YN L+  LC+
Sbjct: 319 LDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCR 378

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
            G ++ A ELL ++   G  P  I+Y ++I    + G  +   +L N M+ KGL P ++T
Sbjct: 379 GGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIIT 438

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           Y+ +        R+E A   F ++Q  GIRPN + YNA++ GLC+ R    A  LFI M 
Sbjct: 439 YSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMI 498

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
             G +PN+ TYTILI      G  +EA  L  E+  R +
Sbjct: 499 SNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGV 537



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 134/440 (30%), Positives = 224/440 (50%), Gaps = 12/440 (2%)

Query: 271 GRGCSPNGVTYNVL----ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEK 326
           G   SPN V +  +    + G  R G+LE+A  L+  M   GL+ SA    P  C    K
Sbjct: 48  GVAASPNAVPHRAVSNDRLRGLVRRGDLEEALRLVESMS--GLEPSAA---PGPCAALIK 102

Query: 327 GLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISY 386
            L       E   V     P +  YN ++ G C  G++  AR    +M  +   PD  +Y
Sbjct: 103 KLCASGRTAEARRVLAACEPDVMAYNAMVAGYCVTGQLDAARRLVADMPME---PDSYTY 159

Query: 387 NTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMIN 446
           NTL+ G C  G  G A ++ D++  R  VP VVTY  L++  C+    + A +L + M  
Sbjct: 160 NTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRA 219

Query: 447 QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSE 506
           +G  PD+ITY ++VNG C+ G +  A EF   +   G +P+  +Y   + G        +
Sbjct: 220 KGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWED 279

Query: 507 AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
           A +L  EM  KG+PP+++T+N+L+  LC+ G +E A E+L ++   G  P+ ++Y  I+H
Sbjct: 280 AEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILH 339

Query: 567 ASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRP 626
           A  +   + R       M+ +G  P +V+Y  L+ A    G ++ A     +++ KG  P
Sbjct: 340 AFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTP 399

Query: 627 NVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLY 686
            +I+YN +I+GL +  +  +A  L  +M  +G+ P+  TY+ + +  C     +EA+R +
Sbjct: 400 VLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAF 459

Query: 687 KEMLDREIEPDYCTHSALLL 706
            ++ D  I P+   ++A+LL
Sbjct: 460 CKVQDMGIRPNTVLYNAILL 479



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/421 (28%), Positives = 207/421 (49%), Gaps = 7/421 (1%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAR--EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEAL 263
           PDV   N ++      G+ V  +     R++ +  ++P   TYNT++   C  G    AL
Sbjct: 122 PDVMAYNAMVA-----GYCVTGQLDAARRLVADMPMEPDSYTYNTLIRGLCGRGRTGNAL 176

Query: 264 ELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGY 323
            +L +M  RGC P+ VTY +L+    +    +QA  L+ +M   G      +YN ++ G 
Sbjct: 177 VVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGI 236

Query: 324 SEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
            ++G + +A+   + + + G  P   +YNI++ GLC   R  DA     EM +K   P++
Sbjct: 237 CQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNV 296

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
           +++N L+   CR G +  A  + D++      P  ++YN ++   C+   ++ A    E 
Sbjct: 297 VTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVEL 356

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           M+++G  PD+++Y  ++   C+ G +  A E  +++  KG  P   +Y T I G  K G 
Sbjct: 357 MVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGK 416

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
           T EA  L  EM+ KG  PD+ITY+ +  GLC+   +EEA     K+   G  P+ + Y +
Sbjct: 417 TKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNA 476

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           I+    +  +     DLF  M+  G  P   TYT+LI      G ++ A     E+  +G
Sbjct: 477 ILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRG 536

Query: 624 I 624
           +
Sbjct: 537 V 537



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 139/478 (29%), Positives = 224/478 (46%), Gaps = 12/478 (2%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKN--CNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           ++  +E+ L +   M  +GL P      C  +IK L  +G + +AR V         +P 
Sbjct: 71  RRGDLEEALRLVESM--SGLEPSAAPGPCAALIKKLCASGRTAEARRVL-----AACEPD 123

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           ++ YN M+  +C  G++  A  L+ +M      P+  TYN LI G    G    A  ++ 
Sbjct: 124 VMAYNAMVAGYCVTGQLDAARRLVADMP---MEPDSYTYNTLIRGLCGRGRTGNALVVLD 180

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           DML+ G      +Y  ++    ++    +A+ L +EM  +G AP + TYN+++ G+C+ G
Sbjct: 181 DMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEG 240

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           RV DA      +      P+ +SYN +L G C +    +A  L  E+  +   P VVT+N
Sbjct: 241 RVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFN 300

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            LI  LCR G +E A ++ + +   G  P+ ++Y  +++  CK   +  A  F   M+ +
Sbjct: 301 MLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSR 360

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G  PD  +Y T +    + G+   A  L  ++  KG  P LI+YN ++ GL K G  +EA
Sbjct: 361 GCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEA 420

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            ELL +MV  G  PD ITY++I         +      F  +   G+ P  V Y  ++  
Sbjct: 421 LELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLG 480

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
              R     A   F  M   G  PN  TY  LI GL     + +A  L  ++   G++
Sbjct: 481 LCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGVV 538



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/407 (28%), Positives = 200/407 (49%), Gaps = 15/407 (3%)

Query: 112 RWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCV 171
           R V   P ++ D + + T++  L   G   +A  V++           D+L  G +   V
Sbjct: 145 RLVADMP-MEPDSYTYNTLIRGLCGRGRTGNALVVLD-----------DMLRRGCVPDVV 192

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           +  IL   L    K+S  +Q + + ++M   G  PD+   N ++  +   G    A E  
Sbjct: 193 TYTIL---LEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFL 249

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
           + +   G +P+ V+YN +L   C     ++A +L+ EM  +G  PN VT+N+LI+   R 
Sbjct: 250 KSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRR 309

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G +E A  ++  + K G   ++ SYNPI+  + ++  +  A+   E MV+RG  P + +Y
Sbjct: 310 GLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSY 369

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           N L+  LC+ G V  A     ++  K   P +ISYNT++ G  ++G   EA  L +E+ +
Sbjct: 370 NTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVT 429

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           + L P ++TY+T+  GLCR   +E A +    + + GI P+ + Y  ++ G CK      
Sbjct: 430 KGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHN 489

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           A + F  M+  G  P+   YT  I G    G   EA  L  E+ ++G
Sbjct: 490 AIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRG 536



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 126/244 (51%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           ++   ++L+    ++ +VE  + V +++ + G  P+  + N I+          +A    
Sbjct: 295 NVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFV 354

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
            +M   G  P IV+YNT+L + C+ GE+  A+ELL +++ +GC+P  ++YN +I G ++ 
Sbjct: 355 ELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKA 414

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G+ ++A  L+ +M+  GL+    +Y+ I  G   +  + EA+    ++   G+ P    Y
Sbjct: 415 GKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLY 474

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           N ++ GLCK     +A   F  M+    +P+  +Y  L+ G    G + EA  L  EL S
Sbjct: 475 NAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCS 534

Query: 412 RNLV 415
           R +V
Sbjct: 535 RGVV 538



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 71/172 (41%), Gaps = 12/172 (6%)

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT--YTVLIHAHAARGRLELA 612
           +P        +   +  GDL     L  +M   GL P+        LI    A GR   A
Sbjct: 56  VPHRAVSNDRLRGLVRRGDLEEALRLVESM--SGLEPSAAPGPCAALIKKLCASGRTAEA 113

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
               +  +     P+V+ YNA++ G C   ++D A  L  DM  E   P+ YTY  LI  
Sbjct: 114 RRVLAACE-----PDVMAYNAMVAGYCVTGQLDAARRLVADMPME---PDSYTYNTLIRG 165

Query: 673 NCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
            C  G    AL +  +ML R   PD  T++ LL     +     A++ L+ +
Sbjct: 166 LCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEM 217


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  255 bits (651), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 151/499 (30%), Positives = 244/499 (48%), Gaps = 36/499 (7%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR-MMGEFGIKPSIVTYNTMLDSF 253
           V   +   G   DV NCN +++ + D G   +A  + R ++  FG +P +V+YN +L   
Sbjct: 168 VLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGL 227

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           C         +L+ EM   GC PN VT++ LI    RNG  E+                 
Sbjct: 228 CMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVH--------------- 272

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
                                +  +M   G AP +  Y  +I G+CK  R+  AR     
Sbjct: 273 --------------------EVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNR 312

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M    + P+++ YNTLL G C +    EA  L  E+  ++     VT+N L+D LC+ G 
Sbjct: 313 MPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGL 372

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           ++   ++ E M+  G +PDVITYT ++NG CK G +  A      M   G +P+  +YT 
Sbjct: 373 VDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTI 432

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            + G        +A  L  +M+ +G PP+ +T+N L++ LCK G +E+A ELL++M+ +G
Sbjct: 433 VLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 492

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
             PD I+Y+++I    + G+     +L N M++KG+SP  + Y+ +  A +  GR+    
Sbjct: 493 CSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVI 552

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
             F  +Q   +R + + YNA+I+ LC+    D+A      M   G +PN+ TYTILI   
Sbjct: 553 QMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGL 612

Query: 674 CNAGNWQEALRLYKEMLDR 692
            + G  +EA  +  E+  +
Sbjct: 613 ASEGFVKEAQEILTELCSK 631



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 138/467 (29%), Positives = 219/467 (46%), Gaps = 36/467 (7%)

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           + P+  TY  ++ + C  G + +AL +L +M  RGC+P    Y+V +    R      A 
Sbjct: 107 VAPNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAV 166

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
           G++RD+         H                           RG A  +   N+++  +
Sbjct: 167 GVLRDL---------HG--------------------------RGCALDVGNCNLVLQAV 191

Query: 359 CKWGRVSDARHRFFEMLRK-NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           C  G V +A     ++L      PD++SYN +L G C +   G    L +E+ +    P 
Sbjct: 192 CDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPN 251

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           +VT++TLI  LCR G  E   ++   M   G  PDV  Y  +++G CK   L +AR   N
Sbjct: 252 IVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILN 311

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            M   GL P+   Y T + G        EA  L  EM  K  P D +T+N+LV  LC+ G
Sbjct: 312 RMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNG 371

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            ++   E+L +M+  G +PD ITYT++I+   + G +     L  +M   G  P  V+YT
Sbjct: 372 LVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYT 431

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           +++    +  R   A    S+M  +G  PN +T+N LIN LC+   ++QA  L   M   
Sbjct: 432 IVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVN 491

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
           G  P+  +Y+ +I+    AGN  EAL L   M+ + + P+   +S++
Sbjct: 492 GCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSI 538



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 194/394 (49%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +  +M+  G  P++   + +I  L  NG   +  EV+  M E G  P +  Y T++D  C
Sbjct: 239 LMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVC 298

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           KE  ++ A  +L  M   G SPN V YN L+ G       E+A GL+ +M      +   
Sbjct: 299 KEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDV 358

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           ++N ++    + GL+   + + E+M+  G  P + TY  +I G CK G + +A      M
Sbjct: 359 TFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSM 418

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
                 P+ +SY  +L G C +    +A  L  ++  +   P  VT+NTLI+ LC+ G +
Sbjct: 419 AACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 478

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           E A +L + M+  G  PD+I+Y+ +++G  K GN   A E  N M++KG+ P+   Y++ 
Sbjct: 479 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSI 538

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
            +     G  ++  ++ E +       D + YN ++  LCK G  + A E L  MV  G 
Sbjct: 539 ASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGC 598

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           +P+  TYT +I      G ++  +++   +  KG
Sbjct: 599 VPNESTYTILIRGLASEGFVKEAQEILTELCSKG 632



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 105/376 (27%), Positives = 192/376 (51%), Gaps = 2/376 (0%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK-VLRDNGFSVKAREVYRMMGEFGIKPSI 243
           +  + E+   V  +M  +G  PDV+    II  V ++    V AR +   M  +G+ P++
Sbjct: 264 RNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEV-ARGILNRMPSYGLSPNV 322

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           V YNT+L   C     +EA  LL EM  + C  + VT+N+L+    +NG +++   ++  
Sbjct: 323 VCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQ 382

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           ML+ G      +Y  +I G+ ++GL+ EA+ L   M   G  P   +Y I++ GLC   R
Sbjct: 383 MLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAER 442

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
             DA     +M+++   P+ +++NTL+   C+ G + +A  L  ++      P +++Y+T
Sbjct: 443 WVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYST 502

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           +IDGL + G+ + A +L   M+ +G+ P+ I Y+ + +     G ++   + F  +    
Sbjct: 503 VIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTT 562

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           ++ D   Y   I+   K G+T  A      M++ G  P+  TY +L+ GL   G ++EA 
Sbjct: 563 VRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQ 622

Query: 544 ELLRKMVGDGFIPDHI 559
           E+L ++   G +  H+
Sbjct: 623 EILTELCSKGALRKHL 638



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 130/275 (47%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
            ++L+    +  +V++ + V  +ML +G +PDV     +I      G   +A  + R M 
Sbjct: 360 FNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMA 419

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
             G +P+ V+Y  +L   C      +A EL+ +M  +GC PN VT+N LI    + G +E
Sbjct: 420 ACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVE 479

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
           QA  L++ ML  G      SY+ +I G  + G   EAL L   MV +G++P    Y+ + 
Sbjct: 480 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIA 539

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
             L   GR++     F  +    V  D + YN ++   C+ G    A      + S   V
Sbjct: 540 SALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCV 599

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
           P   TY  LI GL   G ++ AQ++   + ++G L
Sbjct: 600 PNESTYTILIRGLASEGFVKEAQEILTELCSKGAL 634



 Score = 43.5 bits (101), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 41/101 (40%)

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
           + PN  TY  L+  LC   RI  A  +  DM   G  P    Y + +   C A  ++ A+
Sbjct: 107 VAPNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAV 166

Query: 684 RLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
            + +++  R    D    + +L    D+     AV  L  L
Sbjct: 167 GVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDL 207


>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  255 bits (651), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 155/522 (29%), Positives = 254/522 (48%), Gaps = 6/522 (1%)

Query: 203 GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           G  PDV  C ++I+ L   G +  A  V R     G    +  YNT++  +C+ G +  A
Sbjct: 69  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAA 128

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
             L+  M      P+  TY  +I G    G +  A  L+ DML+ G + S  +Y  ++  
Sbjct: 129 RRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEA 185

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
             +     EA+N+ +EM  +G  P + TYN++I G+C+ GRV DA+     +      PD
Sbjct: 186 VCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPD 245

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
           I+SY T+L G C +    +  +LF E+  +  VP  VT++ L+   CR G +E A Q+ +
Sbjct: 246 IVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQ 305

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            M   G  P+     I++N  CK G +  A +F N M   G  PD  +YTT + G  + G
Sbjct: 306 QMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAG 365

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
               A  L  EM+ K  PP+ +T+N  +  LC+ G +E+A +L+  M   G     +TY 
Sbjct: 366 RWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYN 425

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
           +++H     G +    +LFNN+      P  +TYT L+       RL+ A    + M  K
Sbjct: 426 ALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQK 482

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
               N +T+N L++  C+   +++A  L   M E G  PN  T+  L++      N +EA
Sbjct: 483 DCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEA 542

Query: 683 LRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           L L   ++ + +  D  T+S+++     +D    A++ L ++
Sbjct: 543 LELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAV 584



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 159/519 (30%), Positives = 245/519 (47%), Gaps = 38/519 (7%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           PD      II+ L D G    A  +   M + G +PS+VTY  +L++ CK     EA+ +
Sbjct: 139 PDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNV 198

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG--- 322
           L EM+ +GC+PN VTYNV+I G  R G ++ A+ ++  +   G +    SY  ++ G   
Sbjct: 199 LDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCA 258

Query: 323 --------------------------------YSEKGLLVEALNLEEEMVTRGVAPTLAT 350
                                           +   G++  A+ + ++M   G  P    
Sbjct: 259 ARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTL 318

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
            NI+I  +CK GRV DA      M      PD ISY T+L G CR+G    A  L  E+ 
Sbjct: 319 CNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMV 378

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
            +N  P  VT+NT I  LC+ G +E A +L E M   G    ++TY  +V+G C  G + 
Sbjct: 379 RKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVD 438

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            A E FN +     +P+   YTT + G         A  L   M+ K  P + +T+NVLV
Sbjct: 439 SALELFNNL---PCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLV 495

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
              C+ G +EEA EL+ +M+  G  P+ IT+ +++    +  +     +L + ++ KG+S
Sbjct: 496 SFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVS 555

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
              +TY+ ++   +   R E A      +Q  G+RP V  YN ++  LC+    DQA   
Sbjct: 556 LDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDF 615

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           F  M   G +PN+ TY ILI    + G  +EA  +  E+
Sbjct: 616 FAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSEL 654


>gi|357529169|sp|Q9LMY5.3|PPR41_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g13630
          Length = 826

 Score =  255 bits (651), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 154/544 (28%), Positives = 280/544 (51%), Gaps = 20/544 (3%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           + D+LL + ++  MV+  L +  KM    L    ++ N ++   R+     K  +VY+ +
Sbjct: 168 VWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETD---KMWDVYKEI 224

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
            +     +  TY+T++D  C++ ++++A+  L   + +   P+ V++N +++G+ + G +
Sbjct: 225 KD----KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFV 280

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           + A+     +LK GL  S +S+N +I G    G + EAL L  +M   GV P   TYNIL
Sbjct: 281 DMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNIL 340

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
             G    G +S A     +ML K + PD+I+Y  LL G C+ GNI    +L  ++ SR  
Sbjct: 341 AKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGF 400

Query: 415 -VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
            + +++  + ++ GLC+ G ++ A  L   M   G+ PD++ Y+I+++G CK+G   MA 
Sbjct: 401 ELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMAL 460

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
             ++EM  K + P+   +   + G  + G   EA  L + +++ G   D++ YN+++ G 
Sbjct: 461 WLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGY 520

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
            K G +EEA EL + ++  G  P   T+ S+I+   +  ++   R + + +   GL+P++
Sbjct: 521 AKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSV 580

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC------------RL 641
           V+YT L+ A+A  G  +       EM+ +GI P  +TY+ +  GLC            R 
Sbjct: 581 VSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRE 640

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
           R  ++      DME EGI P++ TY  +I   C   +   A    + M  R ++    T+
Sbjct: 641 RIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATY 700

Query: 702 SALL 705
           + L+
Sbjct: 701 NILI 704



 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 155/524 (29%), Positives = 263/524 (50%), Gaps = 24/524 (4%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K   V+     F  +L+ GL+P V + N +I  L   G   +A E+   M + G++P 
Sbjct: 274 YCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPD 333

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            VTYN +   F   G +  A E++ +M  +G SP+ +TY +L+ G  + G ++    L++
Sbjct: 334 SVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLK 393

Query: 303 DMLKLGLKV-SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
           DML  G ++ S    + ++ G  + G + EAL+L  +M   G++P L  Y+I+I+GLCK 
Sbjct: 394 DMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKL 453

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           G+   A   + EM  K ++P+  ++  LL G C+ G + EA  L D L S      +V Y
Sbjct: 454 GKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLY 513

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           N +IDG  + G +E A +L + +I  GI P V T+  ++ G CK  N++ AR+  + +  
Sbjct: 514 NIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKL 573

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
            GL P   +YTT +      G+T     L+ EM A+G PP  +TY+V+  GLC+    E 
Sbjct: 574 YGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHEN 633

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
            N +LR+ +                         + +    +M  +G+ P  +TY  +I 
Sbjct: 634 CNHVLRERI-----------------------FEKCKQGLRDMESEGIPPDQITYNTIIQ 670

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
                  L  AF++   M+ + +  +  TYN LI+ LC    I +A      ++E+ +  
Sbjct: 671 YLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSL 730

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +K+ YT LI  +C  G+ + A++L+ ++L R        +SA++
Sbjct: 731 SKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVI 774



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/457 (28%), Positives = 239/457 (52%), Gaps = 9/457 (1%)

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           + ++L +L +M+ +  + +  +YN ++  F    ++      I+D        + H+Y+ 
Sbjct: 182 VDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDK-------NEHTYST 234

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           ++ G   +  L +A+        + + P++ ++N ++ G CK G V  A+  F  +L+  
Sbjct: 235 VVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCG 294

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
           ++P + S+N L+ G C  G+I EA  L  ++    + P  VTYN L  G    G +  A 
Sbjct: 295 LVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAW 354

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF-AYTTQIAG 497
           ++  +M+++G+ PDVITYTI++ G C++GN+ M      +ML +G + +     +  ++G
Sbjct: 355 EVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSG 414

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
             K G   EA  L  +M A G  PDL+ Y++++HGLCKLG  + A  L  +M     +P+
Sbjct: 415 LCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPN 474

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
             T+ +++    + G L   R L ++++  G +  +V Y ++I  +A  G +E A   F 
Sbjct: 475 SRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFK 534

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
            +   GI P+V T+N+LI G C+ + I +A  +   ++  G+ P+  +YT L++   N G
Sbjct: 535 VVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCG 594

Query: 678 NWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYK 714
           N +    L +EM    I P   T+S ++ K L + +K
Sbjct: 595 NTKSIDELRREMKAEGIPPTNVTYS-VIFKGLCRGWK 630



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 178/346 (51%), Gaps = 10/346 (2%)

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL-EVAQQLKENM 444
           ++ LL+   R   + ++  +  +++ +NL  +  +YN+++        + +V +++K+  
Sbjct: 169 WDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDK- 227

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
            N+       TY+ +V+G C+   L  A  F      K + P   ++ + ++G  KLG  
Sbjct: 228 -NEH------TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFV 280

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
             A      +L  G  P + ++N+L++GLC +GS+ EA EL   M   G  PD +TY  +
Sbjct: 281 DMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNIL 340

Query: 565 IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
                 +G +    ++  +ML KGLSP ++TYT+L+      G +++  +   +M  +G 
Sbjct: 341 AKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGF 400

Query: 625 RPN-VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
             N +I  + +++GLC+  RID+A  LF  M+ +G+ P+   Y+I+I+  C  G +  AL
Sbjct: 401 ELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMAL 460

Query: 684 RLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLGAE 729
            LY EM D+ I P+  TH ALLL    K   + A   L+SL    E
Sbjct: 461 WLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGE 506


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  255 bits (651), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 156/535 (29%), Positives = 272/535 (50%), Gaps = 1/535 (0%)

Query: 171 VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV 230
           VS+ +   L+    ++  +E  L + +++  + L PD+   N  I      G    A + 
Sbjct: 209 VSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKF 268

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
           +  +   G++P  V+Y +M+   CK G + EA EL  +M+     P    YN +I G+  
Sbjct: 269 FHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGS 328

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
               + A  L+  + + G   S  S+N I+    +K  + EAL L + M  +   P ++T
Sbjct: 329 AERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVM-KKDAKPNIST 387

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           YNI+I  LC  GRV++A     EM    + P+++S N ++   C++  + EA  +F+   
Sbjct: 388 YNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESAS 447

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
            R   P  VTY +LIDGL + G ++ A +L E M++ G   + I YT ++      G   
Sbjct: 448 ERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKE 507

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
              + + EM+R+G +PD     T +    K G+  +   + E+M + GF PD+ +Y++L+
Sbjct: 508 DGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILI 567

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
           HGL K G   E + + + M   GF  D   Y +++    + G + +  ++   M  K + 
Sbjct: 568 HGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVH 627

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           PT+ TY  ++   A   RL+ A+M F E + KGI  NVI Y++LI+G  ++ RID+AY +
Sbjct: 628 PTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLI 687

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             +M ++G+ PN YT+  L++         EAL  ++ M + +  P+  T+S L+
Sbjct: 688 LEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILI 742



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 178/682 (26%), Positives = 317/682 (46%), Gaps = 58/682 (8%)

Query: 83  FQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRS 142
           F+   S   +L+  L   R+ P  AL   R ++   G +    +F T++  L   G +  
Sbjct: 172 FRPPFSAYTVLIGALAEARQ-PERALELLRQMQ-DVGYEVSVPLFTTLVRALAREGQMEP 229

Query: 143 AYWVVETVVCVNMHGILDVLIGGGLSSCVSIKIL--DLLLLIYTKKSMVEQCLLVFNKML 200
           A  +V+ V                  SC+   I+  ++ +  + K   V+     F+++ 
Sbjct: 230 ALALVDEVK----------------GSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELK 273

Query: 201 RNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQ 260
            +GL PD  +   ++ VL   G   +A E++  M      P    YNTM+  +       
Sbjct: 274 AHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFD 333

Query: 261 EALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII 320
           +A +LL  ++ RGC P+ V++N ++T   +  ++++A  L  D++K   K +  +YN II
Sbjct: 334 DAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLF-DVMKKDAKPNISTYNIII 392

Query: 321 CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML-RKNV 379
                 G + EA  + +EM   G+ P L + NI++  LCK  ++ +A HR FE    +  
Sbjct: 393 DMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEA-HRIFESASERGC 451

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFD-------------------------------- 407
            P+ ++Y +L+ G  + G I +A+ LF+                                
Sbjct: 452 NPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHK 511

Query: 408 ---ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
              E+  R   P +   NT +D + + G++E  + + E+M + G LPDV +Y+I+++G  
Sbjct: 512 IYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLT 571

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
           K G        F  M ++G   D  AY   + G  K G   +AY + EEM  K   P + 
Sbjct: 572 KAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVA 631

Query: 525 TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM 584
           TY  +V GL K+  L+EA  L  +    G   + I Y+S+I    ++G +     +   M
Sbjct: 632 TYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEM 691

Query: 585 LRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRI 644
           ++KGL+P + T+  L+ A      ++ A + F  M+     PN  TY+ LINGLCR+++ 
Sbjct: 692 MKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKY 751

Query: 645 DQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
           ++A+  + +M+++G++PN  TYT +I+     GN  +A  L++        PD  + +AL
Sbjct: 752 NKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNAL 811

Query: 705 LLKQLDKDYKVHAVEYLESLTL 726
           +    + +  + A +  E   L
Sbjct: 812 IEGMSNANRPMEAYQVFEETRL 833



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 151/563 (26%), Positives = 261/563 (46%), Gaps = 38/563 (6%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+    +   +E    V   M      P       +I  L +     +A E+ R M + G
Sbjct: 147 LVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVG 206

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
            + S+  + T++ +  +EG+M+ AL L+ E++G    P+ V YNV I  F + G ++ A 
Sbjct: 207 YEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAW 266

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
               ++   GL+    SY  ++    + G L EA  L  +M      P    YN +I G 
Sbjct: 267 KFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGY 326

Query: 359 CKWGRVSDARHRFFEMLR-KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
               R  DA ++  E LR +  IP ++S+N++L    +   + EA  LFD ++ ++  P 
Sbjct: 327 GSAERFDDA-YKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMK-KDAKPN 384

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           + TYN +ID LC  G +  A ++++ M   G+ P++++  IMV+  CK   L  A   F 
Sbjct: 385 ISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFE 444

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE------------------------- 512
               +G  P+   Y + I G  K G   +AYRL E                         
Sbjct: 445 SASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHG 504

Query: 513 ----------EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
                     EM+ +G  PDL   N  +  + K G +E+   +   M   GF+PD  +Y+
Sbjct: 505 RKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYS 564

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
            +IH   + G  R   ++F  M ++G +     Y  ++      G+++ A+    EM+VK
Sbjct: 565 ILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVK 624

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
            + P V TY ++++GL ++ R+D+AY LF + + +GI  N   Y+ LI+     G   EA
Sbjct: 625 HVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEA 684

Query: 683 LRLYKEMLDREIEPDYCTHSALL 705
             + +EM+ + + P+  T ++L+
Sbjct: 685 YLILEEMMKKGLTPNVYTWNSLM 707



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 125/473 (26%), Positives = 228/473 (48%), Gaps = 6/473 (1%)

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
            ++ +  +   +++A  ++  M+     P    Y VLI   +   + E+A  L+R M  +
Sbjct: 146 ALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDV 205

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           G +VS   +  ++   + +G +  AL L +E+    + P +  YN+ I    K G V  A
Sbjct: 206 GYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMA 265

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
              F E+    + PD +SY ++++  C++G +GEA  LF ++ +   VP    YNT+I G
Sbjct: 266 WKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMG 325

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
                  + A +L E +  +G +P V+++  ++    K   +  A   F+ M +K  +P+
Sbjct: 326 YGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVM-KKDAKPN 384

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              Y   I      G  +EAY++++EM   G  P+L++ N++V  LCK   LEEA+ +  
Sbjct: 385 ISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFE 444

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
                G  P+ +TY S+I    + G +     LF  ML  G     + YT LI      G
Sbjct: 445 SASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHG 504

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
           R E     + EM  +G RP++   N  ++ + +   +++   +F DM+  G LP+  +Y+
Sbjct: 505 RKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYS 564

Query: 668 ILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL-----LKQLDKDYKV 715
           ILI+    AG  +E   +++ M  +    D   ++A++       ++DK Y+V
Sbjct: 565 ILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEV 617



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 122/508 (24%), Positives = 228/508 (44%), Gaps = 74/508 (14%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           I+D+L +       V +   + ++M   GL P++ + N ++  L       +A  ++   
Sbjct: 391 IIDMLCM----AGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESA 446

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS----- 289
            E G  P+ VTY +++D   K+G++ +A  L  +M   G   N + Y  LI  F      
Sbjct: 447 SERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRK 506

Query: 290 ------------------------------RNGELEQARGLIRDMLKLGLKVSAHSYNPI 319
                                         + GE+E+ R +  DM   G      SY+ +
Sbjct: 507 EDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSIL 566

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           I G ++ G   E  N+ + M  +G A     YN ++ GLCK G+V  A     EM  K+V
Sbjct: 567 IHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHV 626

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
            P + +Y +++ G  +   + EA++LF+E +S+ +   V+ Y++LIDG  + G ++ A  
Sbjct: 627 HPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYL 686

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           + E M+ +G+ P+V T+  +++   K   +  A   F  M      P+ + Y+  I G  
Sbjct: 687 ILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLC 746

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           ++   ++A+   +EM  +G  P+++TY  ++ GL K+G++ +A  L  +   +G IPD  
Sbjct: 747 RVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSA 806

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
           ++ ++I     M +  R  +                                A+  F E 
Sbjct: 807 SFNALIEG---MSNANRPME--------------------------------AYQVFEET 831

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQA 647
           +++G R NV T  +L++ L +   ++QA
Sbjct: 832 RLRGCRLNVKTCISLLDALNKTECLEQA 859



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 176/369 (47%), Gaps = 1/369 (0%)

Query: 337 EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS 396
           EEM   G          L+  L +  R+ DA      M      P   +Y  L+     +
Sbjct: 130 EEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEA 189

Query: 397 GNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
                A  L  +++      +V  + TL+  L R G +E A  L + +    + PD++ Y
Sbjct: 190 RQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLY 249

Query: 457 TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA 516
            + ++   K G++ MA +FF+E+   GL+PD  +YT+ +    K G   EA  L  +M A
Sbjct: 250 NVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEA 309

Query: 517 KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
           +   P    YN ++ G       ++A +LL ++   G IP  +++ SI+    +   +  
Sbjct: 310 ERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDE 369

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
              LF ++++K   P + TY ++I      GR+  A+    EM++ G+ PN+++ N +++
Sbjct: 370 ALTLF-DVMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVD 428

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
            LC+  ++++A+ +F    E G  PN  TY  LI+     G   +A RL+++MLD   + 
Sbjct: 429 RLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDA 488

Query: 697 DYCTHSALL 705
           +   +++L+
Sbjct: 489 NPIIYTSLI 497



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 108/221 (48%), Gaps = 6/221 (2%)

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           +A+R+   M    F P    Y VL+  L +    E A ELLR+M   G+      +T+++
Sbjct: 159 DAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLV 218

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
            A    G +     L + +    L P +V Y V I      G +++A+ +F E++  G+R
Sbjct: 219 RALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLR 278

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           P+ ++Y +++  LC+  R+ +A  LF  ME E  +P  Y Y  +I    +A  + +A +L
Sbjct: 279 PDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKL 338

Query: 686 YKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
            + + +R   P   + ++ +L  L K  KV      E+LTL
Sbjct: 339 LERLRERGCIPSVVSFNS-ILTCLGKKRKVD-----EALTL 373


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  255 bits (651), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 147/477 (30%), Positives = 243/477 (50%), Gaps = 4/477 (0%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQ-GRGCSPNGVTYNVLITGFSRNGELEQARG 299
           P + T+N ++  +C   E +EA  ++ EM+   G +P+  T+N+++ G  ++G++  A  
Sbjct: 92  PDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMD 151

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
                   G  +  H+Y  I+   ++   + +A+ L E++   G  PT+ATYN L+ GLC
Sbjct: 152 HFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLC 211

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
           K GR+ +A     +++     PD+++Y +L+ G  +     EA+ LF E+  R LV   V
Sbjct: 212 KMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTV 271

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
            Y  LI GL + G +  A  + + M +QG +PDV+T + M++G CK G +  A   F  M
Sbjct: 272 CYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSM 331

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
             +GL P+   Y+  I G  K      A  +  +M      PD ITYN+L+ GLCK G +
Sbjct: 332 EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDV 391

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           E A     +M+  G  PD  TY  ++    + G+      +F++M     SP +VTY  L
Sbjct: 392 EAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTL 451

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           I     R +L  A +YF  M+ +G  P+   Y++L++GLC+  +++    LF +ME  G+
Sbjct: 452 ISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV 511

Query: 660 LPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVH 716
             N  T T LI   C A    EA+ L+  +    +   Y  +S  ++  L K  KV+
Sbjct: 512 -ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYAYNS--IISTLIKSAKVN 565



 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 138/474 (29%), Positives = 246/474 (51%), Gaps = 3/474 (0%)

Query: 173 IKILDLLLLIYTKKSMVEQCLLVFNKMLRN-GLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           ++  ++L+  Y      E+   V  +M  + G+ P +K  N ++  L  +G  + A + +
Sbjct: 94  VETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHF 153

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
                 G    I TY  ++D   K  ++Q+A+ L+ ++   GC+P   TYN L+ G  + 
Sbjct: 154 ETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKM 213

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G LE+A  L+R ++  G      +Y  +I G  ++    EA  L +EM  RG+      Y
Sbjct: 214 GRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCY 273

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
             LI GL + G++  A   +  M  +  +PD+++ +T++ G C++G IG A  +F  + +
Sbjct: 274 TALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEA 333

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           R L P  V Y+ LI GLC+   ++ A ++   M      PD ITY I+++G CK G++  
Sbjct: 334 RGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEA 393

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           AR FF+EML  G +PD + Y   ++G  K G+T  A  + ++M +    P+++TY  L+ 
Sbjct: 394 ARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLIS 453

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           GLCK   L +A+   + M   G  PD   Y+S++    + G L  G  LF+ M R G++ 
Sbjct: 454 GLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVAN 513

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
           +     ++ H   A  R++ A   F+ ++ +G+ P+   YN++I+ L +  +++
Sbjct: 514 SQTRTRLIFHLCKAN-RVDEAVSLFNAIRKEGM-PHPYAYNSIISTLIKSAKVN 565



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 200/401 (49%), Gaps = 1/401 (0%)

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
           + G + S H+ N ++  ++      EA NL +  +     P + T+N+LI G C      
Sbjct: 52  RFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPE 111

Query: 366 DARHRFFEMLRK-NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
           +A     EM     V P + ++N +L+G C+SG +  A   F+   +      + TY  +
Sbjct: 112 EAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAI 171

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           +D L +   ++ A  L E +   G  P + TY  ++NG CKMG L  A +   +++  G 
Sbjct: 172 VDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGC 231

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            PD   YT+ I G  K   + EAY+L +EM  +G   D + Y  L+ GL + G + +A+ 
Sbjct: 232 TPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASS 291

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           + + M   G +PD +T +++I    + G +     +F +M  +GL+P  V Y+ LIH   
Sbjct: 292 VYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLC 351

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
              +++ A    ++M+     P+ ITYN LI+GLC+   ++ A   F +M E G  P+ Y
Sbjct: 352 KARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVY 411

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           TY IL++  C AGN   A  ++ +M      P+  T+  L+
Sbjct: 412 TYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLI 452



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 174/364 (47%), Gaps = 2/364 (0%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           +I   + LL    K   +E+ + +  K++ NG  PDV     +I  L     S +A +++
Sbjct: 199 TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF 258

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
           + M   G+    V Y  ++    + G++ +A  +   M  +GC P+ VT + +I G  + 
Sbjct: 259 KEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKA 318

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G +  A  + + M   GL  +   Y+ +I G  +   +  AL +  +M      P   TY
Sbjct: 319 GRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY 378

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           NILI GLCK G V  AR  F EML     PD+ +YN L+ G+C++GN   A  +FD++ S
Sbjct: 379 NILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSS 438

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
            +  P VVTY TLI GLC+   L  A    ++M  +G  PD   Y+ +V+G CK G L  
Sbjct: 439 SHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEG 498

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
               F+EM R G+   +   T  I    K     EA  L   +  +G P     YN ++ 
Sbjct: 499 GCMLFDEMERSGVANSQ-TRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPY-AYNSIIS 556

Query: 532 GLCK 535
            L K
Sbjct: 557 TLIK 560


>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1016

 Score =  255 bits (651), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 166/563 (29%), Positives = 277/563 (49%), Gaps = 59/563 (10%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           M ++ ++P +   N++I      G   +  ++Y  M    + P++ T+N ++ ++CK G 
Sbjct: 1   MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           +  AL+LL  +       + VTYN +I GF ++G + QA G +  M+K        + N 
Sbjct: 61  LILALDLLRNVD---VEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNI 117

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           ++ G+   GL      + + +V+ G    +  +N LI G CK G +S A      M ++ 
Sbjct: 118 LVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEG 177

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDEL-RSR--------------------NLVPT 417
           ++ DI+SYNTL+ G+C+ G   +A  L  E+  SR                    NL   
Sbjct: 178 LLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEAD 237

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           ++TY T+I   C+   LE A+ L E MI  G LPDV+TY+ +VNG CK G LS A+E   
Sbjct: 238 LITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLR 297

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           EM + G+ P+  AYTT I    K G   EA+  Q +++ +G   DL+    LV GL K  
Sbjct: 298 EMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSS 357

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
             +EA ++ R +     IP+ ITYT++I    ++GD+ R   L   M  K ++P ++TY+
Sbjct: 358 KPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYS 417

Query: 598 -----------------------------------VLIHAHAARGRLELAFMYFSEMQVK 622
                                              +LI  +   G+ E+A   ++EM++ 
Sbjct: 418 SIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLS 477

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
           G++ N + ++ L+N L R +R+D+A  L  D+   G+L +   YT L++    AG    A
Sbjct: 478 GLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAA 537

Query: 683 LRLYKEMLDREIEPDYCTHSALL 705
           L + +EM ++ I  D  T++ L+
Sbjct: 538 LNMVEEMTEKSIPFDVVTYNVLI 560



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 172/636 (27%), Positives = 294/636 (46%), Gaps = 94/636 (14%)

Query: 158 ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
           I+D L+ GG  +C  +   + L+  Y K   +   L +  +M + GLL D+ + N +I  
Sbjct: 134 IMDNLVSGG--TCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLING 191

Query: 218 LRDNGFSVKAREVYRMMGEF-GIKPSI--------------------VTYNTMLDSFCKE 256
               G   KA+ +   + E  G+K S+                    +TY T++ ++CK+
Sbjct: 192 FCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQ 251

Query: 257 GEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSY 316
             ++EA  L  EM   G  P+ VTY+ ++ G  ++G L +A+ L+R+M K+G+  +  +Y
Sbjct: 252 HGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAY 311

Query: 317 NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
             +I    + G   EA   + ++V RG+   L     L+ GL K  +  +A   F  + +
Sbjct: 312 TTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSK 371

Query: 377 KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
            N+IP+ I+Y  L+ GYC+ G++     L  E+  +++ P V+TY+++I+G  + G L+ 
Sbjct: 372 LNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDE 431

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM----------------- 479
           A  + + M++Q I+P+   Y I+++G CK G   +A + +NEM                 
Sbjct: 432 AINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVN 491

Query: 480 ------------------LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
                               +GL  D   YT+ + G  K G  S A  + EEM  K  P 
Sbjct: 492 NLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPF 551

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           D++TYNVL++GL + G   EA  +   M+  G  P+  TY  +I A  + G+L    +L+
Sbjct: 552 DVVTYNVLINGLLEHGKY-EAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELW 610

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI------------ 629
           N M    + P+ +T   L+   +  G +E A    +EM V GI PN++            
Sbjct: 611 NEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKS 670

Query: 630 -----------------------TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
                                   YN LI   CRLR   +A  +   M  +G + +  TY
Sbjct: 671 GKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTY 730

Query: 667 TILINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
             LI   C + + ++AL  Y +ML+  + P+  T++
Sbjct: 731 NALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYN 766



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 147/528 (27%), Positives = 269/528 (50%), Gaps = 9/528 (1%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K   +E+   +  +M    + P+V   + II      G   +A  V + M +  I P+
Sbjct: 388 YCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPN 447

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
              Y  ++D +CK G+ + A +L  EM+  G   N V ++VL+    R   +++A  L++
Sbjct: 448 AYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLK 507

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           D+   GL +   +Y  ++ G+ + G    ALN+ EEM  + +   + TYN+LI GL + G
Sbjct: 508 DVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHG 567

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           +  +A+  +  M+   + P+  +YN ++  YC+ G +  A  L++E++S  ++P+ +T N
Sbjct: 568 KY-EAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCN 626

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           TL+ GL   G++E A  +   M   GI P+++ + +++N S K G  +   +   +++  
Sbjct: 627 TLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDM 686

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           GL+ ++ AY   I    +L  T +A  + + M+  GF  D +TYN L+ G C+   +++A
Sbjct: 687 GLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKA 746

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
                +M+ +G  P+ +TY  ++   L  G +    +LF+ M   GL+P   TY  LI  
Sbjct: 747 LATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISG 806

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
           +   G  + +   + EM  +G  P   TYN LI+   ++ ++DQA  L  +M+  G+ P+
Sbjct: 807 YGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPS 866

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLD 710
             TY ILI   CN     +        LDR ++  Y T +  L+ +++
Sbjct: 867 SSTYDILICGWCNLSKHPD--------LDRTLKKIYRTDAKNLITEMN 906



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/373 (27%), Positives = 182/373 (48%), Gaps = 23/373 (6%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           ++++  Y K+  ++  L ++N+M  + ++P    CN ++  L + G   KA  V   M  
Sbjct: 591 NIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSV 650

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            GI P++V +  +L++  K G+    L++  ++   G   N   YN LI  F R    ++
Sbjct: 651 MGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKK 710

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  +++ M++ G      +YN +I GY E   + +AL    +M+  GV+P + TYN+L+ 
Sbjct: 711 ATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLG 770

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           GL   G +++    F +M    + PD  +Y+TL+ GY + GN  E+  L+ E+ ++  VP
Sbjct: 771 GLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVP 830

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
              TYN LI    + G ++ A++L   M  +G+ P   TY I++ G C   NLS      
Sbjct: 831 KTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWC---NLSK----- 882

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
                    PD       +   LK    ++A  L  EM  KGF P   T   +     + 
Sbjct: 883 --------HPD-------LDRTLKKIYRTDAKNLITEMNDKGFVPCKSTIACISSTFARP 927

Query: 537 GSLEEANELLRKM 549
           G + +A +LL+++
Sbjct: 928 GKMLDAEKLLKEI 940


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  255 bits (651), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 153/498 (30%), Positives = 241/498 (48%), Gaps = 35/498 (7%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V   M   G   D  NCN ++  + + G   +A  + R +  FG +  IV+YN +L   C
Sbjct: 168 VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLC 227

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
                 +  EL+ EM    C+PN VT+N LI    RNG  E+   ++  M       S H
Sbjct: 228 MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQM-------SEH 280

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
                                       G  P +  Y  +I G+CK G +  A      M
Sbjct: 281 ----------------------------GCTPDIRMYATIIDGICKEGHLEVANEILNRM 312

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
               + P+++ YNT+L G C +    EA  L  E+  ++     VT+N L+D  C+ G +
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLV 372

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           +   +L E M++ G +PDVITYT ++NG CK G +  A      M   G +P+  +YT  
Sbjct: 373 DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIV 432

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           + G    G   +A  L  +M+ +G PP+ +T+N L++ LCK G +E+A ELL++M+ +G 
Sbjct: 433 LKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            PD I+Y+++I    + G      +L N M+ KG+SP  + Y+ +  A +  GR+     
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQ 552

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F  ++   IR + + YNA+I+ LC+    D+A   F  M   G +PN+ TYT+LI    
Sbjct: 553 MFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLA 612

Query: 675 NAGNWQEALRLYKEMLDR 692
           + G  +EA  L  E+  R
Sbjct: 613 SEGLAKEAQELLSELCSR 630



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 199/388 (51%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           +I   + L+    +  + E+   V  +M  +G  PD++    II  +   G    A E+ 
Sbjct: 250 NIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEIL 309

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M  +G+KP++V YNT+L   C     +EA ELL EM  + C  + VT+N+L+  F +N
Sbjct: 310 NRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQN 369

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G +++   L+  ML  G      +Y  +I G+ ++GL+ EA+ L + M + G  P   +Y
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSY 429

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
            I++ GLC  GR  DA     +M+++   P+ +++NTL+   C+ G + +A  L  ++  
Sbjct: 430 TIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLV 489

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
               P +++Y+T+IDGL + G  E A +L   M+N+GI P+ I Y+ +     + G ++ 
Sbjct: 490 NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNK 549

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
             + F+ +    ++ D   Y   I+   K  +T  A      M++ G  P+  TY +L+ 
Sbjct: 550 VIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIK 609

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHI 559
           GL   G  +EA ELL ++   G +  H+
Sbjct: 610 GLASEGLAKEAQELLSELCSRGALRKHL 637



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/410 (25%), Positives = 181/410 (44%), Gaps = 3/410 (0%)

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +YN ++ GY   G   +            V P   T+  ++ GLC  GR++DA     EM
Sbjct: 81  AYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEM 137

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
             K   P    Y+ +L   CRSG    +  + + + ++         N +++ +C  G +
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCV 197

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A  L   +   G   D+++Y  ++ G C         E  +EM+R    P+   + T 
Sbjct: 198 DEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I    + G     + +  +M   G  PD+  Y  ++ G+CK G LE ANE+L +M   G 
Sbjct: 258 IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGL 317

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            P+ + Y +++         +   +L + M +K      VT+ +L+      G ++    
Sbjct: 318 KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIE 377

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
              +M   G  P+VITY  +ING C+   ID+A  L   M   G  PN  +YTI++   C
Sbjct: 378 LLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLC 437

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           +AG W +A  L  +M+ +   P+  T + L+     K     A+E L+ +
Sbjct: 438 SAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQM 487


>gi|15225055|ref|NP_181456.1| lateral organ junction protein [Arabidopsis thaliana]
 gi|75100007|sp|O80958.1|PP194_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g39230, mitochondrial; AltName: Full=Protein LATERAL
           ORGAN JUNCTION; Flags: Precursor
 gi|3402682|gb|AAC28985.1| unknown protein [Arabidopsis thaliana]
 gi|330254554|gb|AEC09648.1| lateral organ junction protein [Arabidopsis thaliana]
          Length = 867

 Score =  255 bits (651), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 176/685 (25%), Positives = 330/685 (48%), Gaps = 45/685 (6%)

Query: 87  VSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRS-AYW 145
           V D  ++  +L R R  P  AL++  WV+    +     VF  ++ IL+ S      A  
Sbjct: 77  VDDARVIEVLLGR-RNDPVSALQYCNWVKPLHRLCEGGDVFWVLIHILLSSIHTHDRASN 135

Query: 146 VVETVVCVNMHGILDVLIGGGLSSC------VSIKILDLLLLIYTKKSMVEQCLLVFNKM 199
           ++   V  N   I +V++   + S       ++ +  + LL  Y +   ++  +  F  M
Sbjct: 136 LLVMFVSNNPTLIPNVMVNNLVDSSKRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLM 195

Query: 200 LRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEM 259
           +   ++P V   N ++  L  +    +A+E+Y  M   G+    VT   ++ +  +E + 
Sbjct: 196 VDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKP 255

Query: 260 QEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML-KLGLKVSAHSYNP 318
           +EA+++   +  RG  P+G+ +++ +    +  +L  A  L+R+M  KLG+  S  +Y  
Sbjct: 256 EEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTS 315

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           +I  + ++G + EA+ + +EMV  G+  ++     L+ G CK   +  A   F  M  + 
Sbjct: 316 VIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEG 375

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG----------- 427
           + PD + ++ ++  +C++  + +A   +  ++S  + P+ V  +T+I G           
Sbjct: 376 LAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAAL 435

Query: 428 -----------------------LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
                                   C+ G ++ A    + M  +GI P+V+ Y  M+   C
Sbjct: 436 EIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHC 495

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
           +M N+ +AR  F+EML KGL+P+ F Y+  I G  K  D   A+ +  +M A  F  + +
Sbjct: 496 RMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEV 555

Query: 525 TYNVLVHGLCKLGSLEEANELLRKMVGDG-FIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
            YN +++GLCK+G   +A E+L+ ++ +  +     +Y SII   +++GD     + +  
Sbjct: 556 IYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYRE 615

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           M   G SP +VT+T LI+      R++LA     EM+   ++ ++  Y ALI+G C+   
Sbjct: 616 MSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKND 675

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSA 703
           +  AY LF ++ E G++PN   Y  LI+   N G    A+ LYK+M++  I  D  T++ 
Sbjct: 676 MKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTT 735

Query: 704 LLLKQL-DKDYKVHAVEYLESLTLG 727
           ++   L D +  + +  Y E L LG
Sbjct: 736 MIDGLLKDGNINLASDLYSELLDLG 760



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 164/638 (25%), Positives = 304/638 (47%), Gaps = 25/638 (3%)

Query: 91  ELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETV 150
           +LL+R   R R KP  A++ FR V ++ G + D  +F   ++   ++  L  A       
Sbjct: 243 QLLMRASLRER-KPEEAVKIFRRVMSR-GAEPDGLLFSLAVQAACKTPDLVMA------- 293

Query: 151 VCVNMHGILDVL--IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDV 208
                   LD+L  + G L    S +    +++ + K+  +E+ + V ++M+  G+   V
Sbjct: 294 --------LDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSV 345

Query: 209 KNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWE 268
                ++          KA +++  M E G+ P  V ++ M++ FCK  EM++A+E    
Sbjct: 346 IAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMR 405

Query: 269 MQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSY--NPIICGYSEK 326
           M+    +P+ V  + +I G  +    E A  +  D  +  +   AH +  N I   + ++
Sbjct: 406 MKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWI---AHGFMCNKIFLLFCKQ 462

Query: 327 GLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISY 386
           G +  A +  + M  +G+ P +  YN ++   C+   +  AR  F EML K + P+  +Y
Sbjct: 463 GKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTY 522

Query: 387 NTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMIN 446
           + L+ G+ ++ +   A+ + +++ + N     V YNT+I+GLC+ G    A+++ +N+I 
Sbjct: 523 SILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIK 582

Query: 447 QGILP-DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
           +        +Y  +++G  K+G+   A E + EM   G  P+   +T+ I G  K     
Sbjct: 583 EKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMD 642

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
            A  +  EM +     DL  Y  L+ G CK   ++ A  L  ++   G +P+   Y S+I
Sbjct: 643 LALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLI 702

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
                +G +    DL+  M+  G+S  L TYT +I      G + LA   +SE+   GI 
Sbjct: 703 SGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIV 762

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           P+ I +  L+NGL +  +  +A  +  +M+++ + PN   Y+ +I  +   GN  EA RL
Sbjct: 763 PDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRL 822

Query: 686 YKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLES 723
           + EML++ I  D    + L+  +++K      +  L S
Sbjct: 823 HDEMLEKGIVHDDTVFNLLVSGRVEKPPAASKISSLAS 860


>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 793

 Score =  254 bits (650), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 171/628 (27%), Positives = 288/628 (45%), Gaps = 51/628 (8%)

Query: 90  PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVET 149
           P L+  VL R +   R+AL FF W + Q        V+ T+L++L ++ L          
Sbjct: 167 PPLVCAVL-RSQADERVALNFFYWADRQWRYSHHPVVYYTMLDVLSKTKL---------- 215

Query: 150 VVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVK 209
             C     +L ++   G+      +    +++ Y++   +   L V   M + G+ P + 
Sbjct: 216 --CQGARRVLRLMTRRGIE--CPPEAFGYVMVSYSRAGKLRNALRVLTLMQKAGVEPSLS 271

Query: 210 NCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM 269
            CN  I VL   G   KA +    M   GIKP IVTYN+++  +C    +++ALEL+  +
Sbjct: 272 ICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGL 331

Query: 270 QGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLL 329
             +GC P+ V+Y  ++    +  ++E+ + L+  M+          +N            
Sbjct: 332 PSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMV----------WNS----------- 370

Query: 330 VEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTL 389
                         + P   TYN LI+ L K G   DA     E   K    D + Y+ +
Sbjct: 371 -------------NLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAI 417

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
           ++ +C+ G + EA  L  ++ SR   P VVTY  ++DG CR G ++ A+++ + M   G 
Sbjct: 418 VHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGC 477

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
            P+ ++YT ++NG C  G    ARE  N        P+   Y   + G  + G  SEA  
Sbjct: 478 KPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACD 537

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           L  EM+ KGF P  +  N+L+  LC+   + EA + L + +  G   + + +T++IH   
Sbjct: 538 LTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFC 597

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
           ++GD+     + ++M   G  P  VTYT L  A   +GRL+ A     +M  KG+ P  +
Sbjct: 598 QIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPV 657

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           TY ++I+   +  R+D    L   M +    P +  Y  +I + C+ GN +EA +L  ++
Sbjct: 658 TYRSVIHRYSQWGRVDDMLNLLEKMLKRQ--PFRTVYNQVIEKLCDFGNLEEAEKLLGKV 715

Query: 690 LDREIEPDYCTHSALLLKQLDKDYKVHA 717
           L    + D  T   L+   L K   + A
Sbjct: 716 LRTASKVDANTCHVLMESYLKKGVAISA 743



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 125/413 (30%), Positives = 206/413 (49%), Gaps = 9/413 (2%)

Query: 185 KKSMVEQCLLVFNKMLRNG-LLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
           K+  +E+   +  KM+ N  L+PD    N +I +L  +G +  A    +   + G     
Sbjct: 352 KEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDK 411

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           V Y+ ++ SFC++G M EA  L+ +M  RGC+P+ VTY  ++ GF R G +++A+ +++ 
Sbjct: 412 VGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQ 471

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEA---LNLEEEMVTRGVAPTLATYNILIYGLCK 360
           M K G K +  SY  ++ G    G  +EA   +N+ EE       P   TY  +++GL +
Sbjct: 472 MYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEE---HWWTPNAITYGAVMHGLRR 528

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G++S+A     EM+ K   P  +  N L+   C++  + EA    +E  ++     VV 
Sbjct: 529 EGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVN 588

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           + T+I G C+ GD+E A  + ++M   G  PD +TYT + +   K G L  A E   +ML
Sbjct: 589 FTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKML 648

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            KGL P    Y + I    + G   +   L E+ML +   P    YN ++  LC  G+LE
Sbjct: 649 SKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKR--QPFRTVYNQVIEKLCDFGNLE 706

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
           EA +LL K++      D  T   ++ + L+ G       +   M R+ L+P L
Sbjct: 707 EAEKLLGKVLRTASKVDANTCHVLMESYLKKGVAISAYKVACRMFRRNLTPDL 759



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/374 (28%), Positives = 179/374 (47%), Gaps = 3/374 (0%)

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           Y  ++  L K      AR     M R+ +     ++  ++  Y R+G +  A  +   ++
Sbjct: 203 YYTMLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTLMQ 262

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
              + P++   NT I  L + G LE A +  E M   GI PD++TY  ++ G C +  + 
Sbjct: 263 KAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIE 322

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML-AKGFPPDLITYNVL 529
            A E    +  KG  PD+ +Y T +    K     E   L E+M+      PD +TYN L
Sbjct: 323 DALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTL 382

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           +H L K G  ++A   L++    GF  D + Y++I+H+  + G +   + L  +M  +G 
Sbjct: 383 IHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGC 442

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
           +P +VTYT ++      GR++ A     +M   G +PN ++Y AL+NGLC   +  +A  
Sbjct: 443 NPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEARE 502

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQL 709
           +    EE    PN  TY  +++     G   EA  L +EM+++   P       LL++ L
Sbjct: 503 MINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTP-VEINLLIQSL 561

Query: 710 DKDYK-VHAVEYLE 722
            ++ K V A +YLE
Sbjct: 562 CQNQKVVEAKKYLE 575



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 122/262 (46%), Gaps = 3/262 (1%)

Query: 188 MVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
           + E C L   +M+  G  P     N +I+ L  N   V+A++        G   ++V + 
Sbjct: 532 LSEACDLT-REMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFT 590

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
           T++  FC+ G+M+ AL +L +M   G  P+ VTY  L     + G L++A  LI  ML  
Sbjct: 591 TVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSK 650

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           GL  +  +Y  +I  YS+ G + + LNL E+M+ R   P    YN +I  LC +G + +A
Sbjct: 651 GLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKR--QPFRTVYNQVIEKLCDFGNLEEA 708

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
                ++LR     D  + + L+  Y + G    A+ +   +  RNL P +     +   
Sbjct: 709 EKLLGKVLRTASKVDANTCHVLMESYLKKGVAISAYKVACRMFRRNLTPDLKLCEKVSKK 768

Query: 428 LCRYGDLEVAQQLKENMINQGI 449
           L   G L  A  L    + +GI
Sbjct: 769 LVLDGKLVEADNLMLRFVERGI 790


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 161/522 (30%), Positives = 255/522 (48%), Gaps = 24/522 (4%)

Query: 207 DVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELL 266
           D   C  +I  L +  +  +A      M      P++VTY T+L  F K+ ++     ++
Sbjct: 106 DTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRII 165

Query: 267 WEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII---CGY 323
             M   GC+PN   +N L+  +    +   A  L+  M   G       YN  I   CG 
Sbjct: 166 NMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICG- 224

Query: 324 SEKGLLVEALNLEEEMVTRGVAP--TLATYNILIYG--LCKWGRVSDARHRFFEMLRKNV 379
            EK    + L+L E++    +A    L   N+  +   LC  G+   A     EM+RK  
Sbjct: 225 QEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGF 284

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
           +PD  +Y+ ++   C +  + +AFLLF E++   + P V TY  LID  C+ G +E AQ 
Sbjct: 285 VPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQW 344

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           L E M + G  P V+TYT +++   K   +  A + F+ M+  G +P+   Y   + G  
Sbjct: 345 LFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLC 404

Query: 500 KLGDTSEAYRLQEEMLAKG--------FP--------PDLITYNVLVHGLCKLGSLEEAN 543
           K G+ S+A+ +  +++           FP        P+++TY  LV GLCK   ++ A+
Sbjct: 405 KAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAH 464

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
           ELL  M+  G  P+HI Y ++I    + G +   +++F  M + G  P++ TYT LI   
Sbjct: 465 ELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRM 524

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
              GRL+LA    S+M      PNV+TY A+I+GLCR+   ++A  L   MEE+G  PN 
Sbjct: 525 FKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNV 584

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            TYT LI+    AG    +L L+ +M  +   P+Y T+  L+
Sbjct: 585 VTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLI 626



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 174/638 (27%), Positives = 292/638 (45%), Gaps = 70/638 (10%)

Query: 112 RWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCV 171
           RW +    ++R++F   T+L   + SGL+ ++Y+             +  L     +SC+
Sbjct: 90  RWADALDMIEREDFKLDTVLCTHMISGLMEASYF----------DEAMSFLHRMRCNSCI 139

Query: 172 -SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV 230
            ++     LL  + KK  +  C  + N M+  G  P+    N ++    +      A ++
Sbjct: 140 PNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKL 199

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKE---------------------------------- 256
              M   G  P  V YN  + S C +                                  
Sbjct: 200 LNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANF 259

Query: 257 -------GEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
                  G+  +A +L+ EM  +G  P+  TY+ +IT      ++E+A  L ++M  +G+
Sbjct: 260 ARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGV 319

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
               ++Y  +I  + + GL+ +A  L EEM + G +PT+ TY  LI+   K  +V  A  
Sbjct: 320 TPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQAND 379

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL----------------RSRN 413
            F  M+     P+ ++Y  L+ G C++GNI +AF ++ +L                    
Sbjct: 380 IFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHT 439

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           L P VVTY  L+DGLC+   ++ A +L + M++ G  P+ I Y  +++G CK G +  A+
Sbjct: 440 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQ 499

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
           E F +M + G  P    YT+ I    K G    A ++  +ML     P+++TY  ++ GL
Sbjct: 500 EVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGL 559

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
           C++G  E+A +LL  M   G  P+ +TYT++I    + G +    DLF  M RKG SP  
Sbjct: 560 CRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNY 619

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
           VTY VLI+   A G L+ A +   EM+       +  Y   I G    +    + G+  +
Sbjct: 620 VTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFS--KSFIASLGILEE 677

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           ME  G +P    Y +LI+    AG  + A+ L+KEM++
Sbjct: 678 MESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME 715



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 146/515 (28%), Positives = 247/515 (47%), Gaps = 22/515 (4%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           ++   +  +M+R G +PD    +++I  L       KA  +++ M   G+ P + TY  +
Sbjct: 270 DKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTIL 329

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           +DSFCK G +++A  L  EM+  GCSP  VTY  LI  + +  ++ QA  +   M+  G 
Sbjct: 330 IDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGC 389

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG----------------VAPTLATYNI 353
           + +  +Y  ++ G  + G + +A  +  +++                   +AP + TY  
Sbjct: 390 RPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGA 449

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           L+ GLCK  +V  A      ML     P+ I Y+ L+ G+C++G I  A  +F ++    
Sbjct: 450 LVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCG 509

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
            +P+V TY +LID + + G L++A ++   M+     P+V+TYT M++G C++G    A 
Sbjct: 510 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKAL 569

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
           +  + M  KG  P+   YT  I G  K G    +  L  +M  KG  P+ +TY VL++ L
Sbjct: 570 KLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHL 629

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHIT-YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           C  G L++A  LL +M    + P ++  Y   I    +      G  +   M   G  P 
Sbjct: 630 CAAGLLDKARLLLGEM-KQTYWPKYLQGYRCAIQGFSKSFIASLG--ILEEMESYGTVPI 686

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQ--VKGIRPNVITYNALINGLCRLRRIDQAYGL 650
              Y +LI   +  GRLE+A     EM      ++ +   Y +LI  LC   ++++A+ L
Sbjct: 687 APVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRL 746

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           + +M   G +P    +  LI        W EAL+L
Sbjct: 747 YSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 781



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 127/502 (25%), Positives = 195/502 (38%), Gaps = 92/502 (18%)

Query: 295 EQARGLIRDMLK-LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
             A G   D LK  G + S  +YN ++   S  G +     +++EM   G      T   
Sbjct: 21  SHAAGDSEDPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGC 80

Query: 354 LIYGLCKWGRVSDA-------------------------------RHRFFEMLRKN-VIP 381
             + LCK GR +DA                                  F   +R N  IP
Sbjct: 81  FAHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIP 140

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           ++++Y TLL G+ +   +G    + + + +    P    +N+L+   C   D   A +L 
Sbjct: 141 NVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLL 200

Query: 442 ENMINQGILPDVITYTIMVNGS-------------------------------------- 463
             M   G  P  + Y I + GS                                      
Sbjct: 201 NRMTTCGCPPGYVVYNIFI-GSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANF 259

Query: 464 ----CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
               C +G    A +   EM+RKG  PD   Y+  I          +A+ L +EM   G 
Sbjct: 260 ARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGV 319

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
            PD+ TY +L+   CK G +E+A  L  +M   G  P  +TYT++IHA L+   + +  D
Sbjct: 320 TPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQAND 379

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF----------------MYFSEMQVKG 623
           +F+ M+  G  P  VTY  L+      G +  AF                 YF       
Sbjct: 380 IFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHT 439

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
           + PNV+TY AL++GLC+  ++D A+ L   M   G  PN   Y  LI+  C AG    A 
Sbjct: 440 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQ 499

Query: 684 RLYKEMLDREIEPDYCTHSALL 705
            ++ +M      P   T+++L+
Sbjct: 500 EVFLQMTKCGYLPSVHTYTSLI 521



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 129/514 (25%), Positives = 219/514 (42%), Gaps = 66/514 (12%)

Query: 84  QAVVSDPELLVRVLNRIREKPRIALRFFRWVETQ-PGVKRDEFVFCTILEILIESGLLRS 142
           +  V D     +V+  +    ++   F  + E +  GV  D + +  +++   ++GL+  
Sbjct: 282 KGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQ 341

Query: 143 AYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRN 202
           A W+ E +  V            G S   ++     L+  Y K   V Q   +F++M+  
Sbjct: 342 AQWLFEEMRSV------------GCSP--TVVTYTALIHAYLKAKQVPQANDIFHRMVDA 387

Query: 203 GLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMG---------------EFGIKPSIVTY 246
           G  P+      ++  L   G   KA EVY +++G                  + P++VTY
Sbjct: 388 GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 447

Query: 247 NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
             ++D  CK  ++  A ELL  M   GC PN + Y+ LI GF + G+++ A+ +   M K
Sbjct: 448 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 507

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
            G   S H+Y  +I    + G L  A+ +  +M+     P + TY  +I GLC+ G    
Sbjct: 508 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 567

Query: 367 ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
           A      M  K   P++++Y  L+ G  ++G I  +  LF ++  +   P  VTY  LI+
Sbjct: 568 ALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLIN 627

Query: 427 GLCRYGDLEVAQQL---------------------------------KENMINQGILPDV 453
            LC  G L+ A+ L                                  E M + G +P  
Sbjct: 628 HLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIA 687

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLR--KGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
             Y ++++   K G L +A E   EM+     ++ D   Y + I          EA+RL 
Sbjct: 688 PVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLY 747

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
            EM  +GF P+L  +  L+ GL ++   +EA +L
Sbjct: 748 SEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 781


>gi|449487636|ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g19290-like [Cucumis
           sativus]
          Length = 885

 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 146/516 (28%), Positives = 256/516 (49%), Gaps = 1/516 (0%)

Query: 186 KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVT 245
           K      L + N M+ NG  P +     II      G    AR+ +  + + G+  + + 
Sbjct: 305 KGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIV 364

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           YN M+  + K  ++ +A  L  EM+ +   P+G+T+N L+ G  R G+ E    L+RD+ 
Sbjct: 365 YNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLS 424

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
             GL   +   +  + G    G   EA+ L E ++ +G+ P++  +N +I      G   
Sbjct: 425 VSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEE 484

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
            A + +  M++  + P   + ++LL    R G++ EA++   ++  +    T + +  L+
Sbjct: 485 RAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLL 544

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           DG  R G + +A+ L   M  +G+ PD + +   +NG C  G ++ A + F++MLRKG  
Sbjct: 545 DGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFV 604

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           P+ F Y + I G  K+G  +EA +L  EM  +G  PD+ T N+++ GLCK G ++ A E 
Sbjct: 605 PNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIET 664

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
              M   G  PD +TY ++I    +  D+    DL   M   G  P L TY + IH +  
Sbjct: 665 FMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCT 724

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
             ++  A M   E+   GI PN +TYN +IN +C +  +D A  L   + +   +PN  T
Sbjct: 725 VRKINRAVMILEELISVGIVPNTVTYNTMINAVCNV-ILDHAMILTAKLLKMAFVPNTVT 783

Query: 666 YTILINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
             +L+++ C  G  ++A+   +++ +  ++ D  TH
Sbjct: 784 VNVLLSQFCKQGMPEKAIFWGQKLSEIHLDFDETTH 819



 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 140/480 (29%), Positives = 236/480 (49%)

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           +A E+   M E G+ P+    + +     + G+     +L  ++  +G  PN  T+N+LI
Sbjct: 205 EALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFTFNLLI 264

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
             F R G       L+  M K   +   +SYN +I     KG    AL+L   M+  G  
Sbjct: 265 LEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCK 324

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P++AT+  +I   CK G V  AR  F E+    +  + I YN ++ GY ++ +I +A LL
Sbjct: 325 PSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLL 384

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
           F+E+R++++VP  +T+NTL+ G  RYG  E   +L  ++   G+L D     + V G C 
Sbjct: 385 FEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCW 444

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
            G    A +    +L KG+ P   A+ + IA     G    A+     M+  G  P   T
Sbjct: 445 AGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSST 504

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
            + L+  L + GSL+EA   L  M+  GF   ++ +T ++     +G +     L+N M 
Sbjct: 505 CSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMK 564

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
            +G+ P  V +   I+     G +  A+  FS+M  KG  PN   YN+LI G C++ +++
Sbjct: 565 GRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLN 624

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +A  L  +M + G+LP+ +T  ++I   C  G  + A+  + +M    + PD  T++ L+
Sbjct: 625 EALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLI 684



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 138/511 (27%), Positives = 251/511 (49%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F  ++R G  P+    N +I      G++     +  +MG+F  +P + +YN ++++ C
Sbjct: 244 LFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANC 303

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
            +G+   AL LL  M   GC P+  T+  +I  F + G +E AR    ++  +GL  +  
Sbjct: 304 LKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTI 363

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
            YN +I GY +   + +A  L EEM T+ + P   T+N L+ G  ++G+  D      ++
Sbjct: 364 VYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDL 423

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
               ++ D    +  + G C +G   EA  L + L  + + P+VV +N++I      G  
Sbjct: 424 SVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLE 483

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           E A      M+  G+ P   T + ++    + G+L  A     +M+ KG      A+T  
Sbjct: 484 ERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVL 543

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           + G  ++G  + A  L  EM  +G  PD + +   ++GLC  G + +A ++   M+  GF
Sbjct: 544 LDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGF 603

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
           +P++  Y S+I    ++G L     L   M ++GL P + T  ++I     +GR++LA  
Sbjct: 604 VPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIE 663

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F +M   G+ P+++TYN LI+G C+   +  A  L + M + G  P+  TY I I+  C
Sbjct: 664 TFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYC 723

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
                  A+ + +E++   I P+  T++ ++
Sbjct: 724 TVRKINRAVMILEELISVGIVPNTVTYNTMI 754



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 151/526 (28%), Positives = 236/526 (44%), Gaps = 70/526 (13%)

Query: 247 NTMLDSFCKEGEMQEALELL-------------------------------WEMQG---- 271
           +T++ +F K     EALE+L                               W++ G    
Sbjct: 191 DTLMQAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVR 250

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
           +G  PN  T+N+LI  F R G       L+  M K   +   +SYN +I     KG    
Sbjct: 251 KGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQSSY 310

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
           AL+L   M+  G  P++AT+  +I   CK G V  AR  F E+    +  + I YN ++ 
Sbjct: 311 ALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMIS 370

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
           GY ++ +I +A LLF+E+R++++VP  +T+NTL+ G  RYG  E   +L  ++   G+L 
Sbjct: 371 GYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLH 430

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE------------- 498
           D     + V G C  G    A +    +L KG+ P   A+ + IA               
Sbjct: 431 DSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAFYAY 490

Query: 499 ----------------------LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
                                 ++ G   EA+    +M+ KGFP   + + VL+ G  ++
Sbjct: 491 GIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRI 550

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G++  A  L  +M G G  PD + + + I+     G +    D+F++MLRKG  P    Y
Sbjct: 551 GAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVY 610

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
             LI      G+L  A     EM  +G+ P++ T N +I GLC+  R+  A   F+DM  
Sbjct: 611 NSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCR 670

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
            G+ P+  TY  LI+  C A +   A  L  +M D   EPD  T++
Sbjct: 671 MGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYN 716



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/343 (23%), Positives = 149/343 (43%), Gaps = 7/343 (2%)

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
           HR +E        D    +TL+  + +S    EA  +  ++R   + P     + L   L
Sbjct: 180 HRVYE-------SDFSVLDTLMQAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLL 232

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
            R GD     +L  +++ +G  P+  T+ +++   C+ G   +     + M +   +PD 
Sbjct: 233 IRAGDCGAVWKLFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDV 292

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
           ++Y   I      G +S A  L   M+  G  P + T+  ++   CK G++E A +   +
Sbjct: 293 YSYNIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDE 352

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           +   G   + I Y  +I   ++  D+ +   LF  M  K + P  +T+  L+  H   G+
Sbjct: 353 IEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGK 412

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
            E       ++ V G+  +    +  + GLC   R D+A  L  ++ E+GI P+   +  
Sbjct: 413 EEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNS 472

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDK 711
           +I    NAG  + A   Y  M+   + P   T S+LL+  + K
Sbjct: 473 IIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRK 515


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 159/539 (29%), Positives = 271/539 (50%), Gaps = 37/539 (6%)

Query: 204 LLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEAL 263
           + P+++  N +++ L   G   +A  ++  +    + P  +TY+T++    K+  +  AL
Sbjct: 154 IAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHAL 213

Query: 264 ELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK-LGLKVSAHSYNPIICG 322
           +LL EM      P+ V YN L+ G  + GE E+   +   ++K  G + +  +YN ++ G
Sbjct: 214 DLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDG 273

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
             + G   E   + E MV   + P + TY ILI+GLC+ G V  A   + E+++  ++ D
Sbjct: 274 LCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVID 333

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDE--------LRSRNL-------------------- 414
              YN+L+ G+C++G + EA+  +D         LR+ N+                    
Sbjct: 334 AAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDL 393

Query: 415 -------VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG 467
                  +P  VT+ TLI GLC+ G    A  + E     G   DV +Y+ M+NG C +G
Sbjct: 394 LEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVG 453

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
            L  A + + +M + G +P+   Y   I+G  ++  TS+A R+  +M   G  P +ITYN
Sbjct: 454 RLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYN 513

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
            L+ GLCK    +EA+ + R+MV +GF PD  TY S+I        +     ++  +L K
Sbjct: 514 TLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYK 573

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEM-QVKGIRPNVITYNALINGLCRLRRIDQ 646
           GL   ++ + +LIH   + G+++ A   FS+M + K   PN++TYN L++GL     ID+
Sbjct: 574 GLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDK 633

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           A  L+  + E+G+ P+  +Y   I   C+     E ++L  E+L R I P   T + L+
Sbjct: 634 AATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILV 692



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 139/496 (28%), Positives = 239/496 (48%), Gaps = 41/496 (8%)

Query: 184 TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMGEFGIKPS 242
            K+  ++  L + ++M R+ + PDV   N ++      G   K   V+ +++ + G +P+
Sbjct: 204 AKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPN 263

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           + TYN MLD  CK G  +E  E+   M      P+ +TY +LI G  R+G+++ A  +  
Sbjct: 264 LATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYS 323

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +++K GL + A  YN ++ G+ + G + EA    +     G+   L TYNI+I GL   G
Sbjct: 324 EIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSG 382

Query: 363 RVSDARHRFFEMLRKNV--IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            V +A    +++L K+V  IPD +++ TL++G C++G   +AF +F+E R       V +
Sbjct: 383 MVDEAIE-LWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFS 441

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y+++I+GLC  G L  A ++ E M   G  P+   Y  +++G C++   S A   +++M 
Sbjct: 442 YSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMA 501

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY-------------- 526
             G  P    Y T I G  K     EA  +  EM+  GF PD+ TY              
Sbjct: 502 DNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKID 561

Query: 527 ---------------------NVLVHGLCKLGSLEEANELLRKMVGDGFIPDH-ITYTSI 564
                                N+L+HGLC  G ++EA  +   M      P + +TY ++
Sbjct: 562 DALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTL 621

Query: 565 IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
           +    E G + +   L+ ++   GL P +++Y   I    +  R+        E+  +GI
Sbjct: 622 MDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGI 681

Query: 625 RPNVITYNALINGLCR 640
            P VIT+N L+  + +
Sbjct: 682 IPTVITWNILVRAVIK 697



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 133/475 (28%), Positives = 222/475 (46%), Gaps = 44/475 (9%)

Query: 283 VLITGFSRNGELEQARGLIRDMLK-LGLKVSAHSYNPIICGYSEKGLLVEA----LNLEE 337
           V+++ FSR    + A    R +   LG      S+N ++  +       +A     +L  
Sbjct: 88  VVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSH 147

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
               R +AP L TYNI++  LC  G +  A   F  + R+ V PD I+Y+TL+ G  +  
Sbjct: 148 GAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQD 207

Query: 398 NIGEAFLLFDELRSRNLVPTVV------------------------------------TY 421
            +  A  L DE+    + P VV                                    TY
Sbjct: 208 RLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATY 267

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           N ++DGLC++G  +   ++ E M+   + PDVITY I+++G C+ G++  A   ++E+++
Sbjct: 268 NVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIK 327

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
            GL  D   Y + + G  + G   EA++  +     G   +L TYN+++ GL   G ++E
Sbjct: 328 TGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGL-RNLRTYNIMIKGLFDSGMVDE 386

Query: 542 ANELLRKMVGD-GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           A EL   +  D   IPD +T+ ++IH   + G   +   +F      G    + +Y+ +I
Sbjct: 387 AIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMI 446

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
           +     GRL  A   + +M   G +PN   YNALI+G C++ R   A  ++  M + G  
Sbjct: 447 NGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCS 506

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKV 715
           P   TY  LI+  C A  +QEA  + +EM++    PD  T+ + L++ L  D K+
Sbjct: 507 PTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGS-LIRGLFSDKKI 560



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 208/420 (49%), Gaps = 5/420 (1%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V+ +M+ N L PDV     +I  L  +G    A  VY  + + G+      YN+++  FC
Sbjct: 286 VWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFC 345

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKV--S 312
           + G +QEA +  W+  G     N  TYN++I G   +G +++A  L  D+L+  +     
Sbjct: 346 QAGRVQEAWKF-WDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELW-DLLEKDVACIPD 403

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
             ++  +I G  + G   +A  + EE    G    + +Y+ +I GLC  GR+ DA   + 
Sbjct: 404 TVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYE 463

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
           +M +    P+   YN L+ G+C+     +A  ++ ++      PTV+TYNTLIDGLC+  
Sbjct: 464 KMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAE 523

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
             + A  +   M+  G  PD+ TY  ++ G      +  A   + ++L KGL+ D   + 
Sbjct: 524 KYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHN 583

Query: 493 TQIAGELKLGDTSEAYRLQEEML-AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
             I G    G   EA  +  +M   K  PP+L+TYN L+ GL + G +++A  L   +  
Sbjct: 584 ILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITE 643

Query: 552 DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLEL 611
           DG  PD I+Y + I        +  G  L + +L +G+ PT++T+ +L+ A    G +++
Sbjct: 644 DGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQV 703



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 157/288 (54%), Gaps = 1/288 (0%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           +     +   +F +   +G   DV + + +I  L + G  V A +VY  M + G KP+  
Sbjct: 416 QNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSH 475

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
            YN ++  FC+     +A+ +  +M   GCSP  +TYN LI G  +  + ++A  + R+M
Sbjct: 476 IYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREM 535

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           ++ G      +Y  +I G      + +AL++ ++++ +G+   +  +NILI+GLC  G+V
Sbjct: 536 VENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKV 595

Query: 365 SDARHRFFEML-RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
            +A H F +M  +KN  P++++YNTL+ G   +G I +A  L+  +    L P +++YNT
Sbjct: 596 DEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNT 655

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
            I GLC    +    QL + ++++GI+P VIT+ I+V    K G + +
Sbjct: 656 RIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQV 703


>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 789

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 174/641 (27%), Positives = 293/641 (45%), Gaps = 56/641 (8%)

Query: 90  PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVET 149
           P L+  VL R +   R+AL FF W + Q        V+ T+L++L             +T
Sbjct: 163 PSLVCAVL-RSQADERVALNFFYWADRQWRYSHHPLVYYTLLDVL------------SKT 209

Query: 150 VVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVK 209
            +C     +L ++   G+   +S +    +++ Y++   +   L V   M + G+ P++ 
Sbjct: 210 KLCQGARRVLRLMTRRGIE--LSPEAFGCVMVSYSRAGKLRNALRVLTLMQKAGVEPNLS 267

Query: 210 NCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM 269
            CN  I VL       KA      M   GIKP IVTYN+++  +C    +++ALEL+  +
Sbjct: 268 ICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGL 327

Query: 270 QGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLL 329
             +GC P+ V+Y  ++    +  ++EQ + L+  M++                       
Sbjct: 328 PSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQ----------------------- 364

Query: 330 VEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTL 389
                         + P   TYN LI+ L K G   DA     E   K    D + Y+ +
Sbjct: 365 -----------DSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAI 413

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
           ++ +C+ G + EA  L  ++ SR+  P VVTY  ++DG CR G ++ A+++ + M   G 
Sbjct: 414 VHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGC 473

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
            P+ ++YT ++NG C  G    ARE  N        P+   Y   + G  + G  SEA  
Sbjct: 474 KPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACD 533

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           L  EM+ KGF P  +  N+L+  LC+   + EA + L + +  G   + + +T++IH   
Sbjct: 534 LTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFC 593

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
           ++GD+     +  +M      P  VTYT L  A   +GRL+ A     +M  KG+ P  +
Sbjct: 594 QIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPV 653

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           T+ ++I+  C+  R+D    L   M +    P +  Y  +I + C+ GN +EA +L  ++
Sbjct: 654 TFRSVIHRYCQWGRVDDMLNLLDRMVKRK--PFRTIYNHVIEKLCDFGNLEEAEKLLGKV 711

Query: 690 LDREIEPDYCTHSALLLKQLDKD-----YKVHAVEYLESLT 725
           L    + D  T   L+   L K      YKV    +  +LT
Sbjct: 712 LRTASKLDANTCHVLMESCLKKGVALSAYKVACQMFRRNLT 752


>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
          Length = 1161

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 152/537 (28%), Positives = 273/537 (50%), Gaps = 1/537 (0%)

Query: 191 QCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTML 250
           +  L+  +M ++ L PD    N +I      G    AR V+  M    + PS+ TY TM+
Sbjct: 313 RAFLLLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMI 372

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
           D +C+   + +AL +L EMQ  G  P+ +TY+ L+ G+ +   L  A  L+ D+   G+ 
Sbjct: 373 DGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGIT 432

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
           ++      +I G+ + G + +A  + + M   G+ P + TY+ LI G+C+  ++ + +  
Sbjct: 433 INKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEI 492

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
              M +  ++P+ + Y TL+  YC++G + EA   F ++  R LV   V +N L+    R
Sbjct: 493 LSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYR 552

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
            G +  A+  ++ M    I  D +++  +++  C  GN+  A   +++M+R G  P+   
Sbjct: 553 EGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCT 612

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           Y   + G  + G   +A +    +L   F  D  T+N L+ G+C+ G+L+EA +L  KM+
Sbjct: 613 YQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMI 672

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
            +  +PD  TYT ++      G +     +   ML KG+ P  V YT L++     G+++
Sbjct: 673 KNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVK 732

Query: 611 LAFMYFSEMQVK-GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL 669
            A   F E+  K G+  + I YN+L+NG  + R ++    +  DM +  + PN  +Y IL
Sbjct: 733 AASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNIL 792

Query: 670 INENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
           ++     G + ++L LYK M+ + I PD  T+  L+L   +      AV++LE + L
Sbjct: 793 MHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVL 849



 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 161/566 (28%), Positives = 279/566 (49%), Gaps = 37/566 (6%)

Query: 195  VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
            +   M  +G+ PDV   + +I  +       + +E+   M + GI P+ V Y T++  +C
Sbjct: 457  ILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYC 516

Query: 255  KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
            K G ++EAL+   ++  RG   N V +N L+  F R G + +A    + M ++ +   + 
Sbjct: 517  KAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSV 576

Query: 315  SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
            S+N II  Y  +G +V A ++ ++MV  G +P + TY  L+ GLC+ G +  AR     +
Sbjct: 577  SFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCL 636

Query: 375  LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
            L      D  ++N LL G CR G + EA  L +++   N +P + TY  L+ G CR G +
Sbjct: 637  LDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKI 696

Query: 435  EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML-RKGLQPDRFAYTT 493
              A  + + M+ +G++PD + YT ++NG    G +  A   F+E++ ++GL  D  AY +
Sbjct: 697  LPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNS 756

Query: 494  QIAGELK-----------------------------------LGDTSEAYRLQEEMLAKG 518
             + G LK                                    G  S++  L + M+ KG
Sbjct: 757  LMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKG 816

Query: 519  FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
              PD +TY +L+ GL + G ++ A + L KMV +G  PD + +  +I A  E   +    
Sbjct: 817  IRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNAL 876

Query: 579  DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
             +FN M    +SP+  T++ +I+    +G L+ +     EM   G++PN   Y AL+N  
Sbjct: 877  QVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAK 936

Query: 639  CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
            CR+  ID+A+ L  +M+  GI+P +   + +I   C  G  +EA+ ++  M+   + P  
Sbjct: 937  CRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTV 996

Query: 699  CTHSALLLKQLDKDYKVHAVEYLESL 724
             T +  L+  L K+ K+    +L+ L
Sbjct: 997  ATFTT-LMHSLCKESKIADALHLKRL 1021



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 172/661 (26%), Positives = 313/661 (47%), Gaps = 52/661 (7%)

Query: 105 RIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIG 164
           ++AL+    +  + G+ R  +V+C  + ILI++ +   A  V++ +    + G     I 
Sbjct: 85  KLALKILSSIVERSGLDRITYVYCMAVPILIQAQMHSQAMSVLKHLA---VTGFSCTAIF 141

Query: 165 GGLSSCVS------IKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL 218
             L   +S        + +LL+  Y K+  V    +    M   G      +CN I+  L
Sbjct: 142 TSLLRTISRFDPTNHVVFELLVKAYVKERKVLDAAVAVLFMDDCGFKASPVSCNTILNAL 201

Query: 219 RDNGFSVKAREVYRMMGEFGIKP---SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCS 275
            + G   +++ V+  + E   +     + T N +L+S C  GE ++A ++L +M+    S
Sbjct: 202 VEEG---ESKHVWLFLRESLARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQKMKSCHIS 258

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
            N VTYN ++  + + G  + A  ++ DM +  ++   ++YN +I           A  L
Sbjct: 259 -NSVTYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLL 317

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
            + M    + P   TYN LI G  + G+++ AR+ F  MLR+N++P + +Y T++ GYCR
Sbjct: 318 LKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCR 377

Query: 396 SGNIGEAFLLFDELRSRNLVPTVVTYNT-------------------------------- 423
           +  I +A  +  E++   ++P+ +TY+                                 
Sbjct: 378 NRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTM 437

Query: 424 ---LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
              LIDG C+ G++  A+Q+ ++M   GI PDVITY+ ++NG C+M  +   +E  + M 
Sbjct: 438 RTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQ 497

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           + G+ P+   YTT I    K G   EA +   ++  +G   + + +N L+H   + G + 
Sbjct: 498 KSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMIT 557

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA    + M       D +++  II +    G++     ++++M+R G SP + TY  L+
Sbjct: 558 EAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLL 617

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                 G L  A  + S +       +  T+NAL+ G+CR   +D+A  L   M +   L
Sbjct: 618 RGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCL 677

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
           P+ +TYTIL++  C  G    AL + + ML++ + PD   ++  LL  L  + +V A  Y
Sbjct: 678 PDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTC-LLNGLINEGQVKAASY 736

Query: 721 L 721
           +
Sbjct: 737 V 737



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 142/528 (26%), Positives = 256/528 (48%), Gaps = 1/528 (0%)

Query: 179  LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
            L+  Y K   V++ L  F  + R GL+ +    N ++      G   +A    + M    
Sbjct: 511  LICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMN 570

Query: 239  IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
            I    V++N ++DS+C  G +  A  +  +M   G SPN  TY  L+ G  + G L QAR
Sbjct: 571  ISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQAR 630

Query: 299  GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
              +  +L +   +   ++N ++ G    G L EAL+L E+M+     P + TY IL+ G 
Sbjct: 631  QFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGF 690

Query: 359  CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR-NLVPT 417
            C+ G++  A      ML K V+PD ++Y  LL G    G +  A  +F E+  +  L   
Sbjct: 691  CRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYAD 750

Query: 418  VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
             + YN+L++G  +  ++   +++  +M    + P+  +Y I+++G  K G  S +   + 
Sbjct: 751  CIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYK 810

Query: 478  EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
             M+RKG++PD   Y   I G  + G    A +  E+M+ +G  PD + +++L+    +  
Sbjct: 811  YMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKS 870

Query: 538  SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
             +  A ++   M      P   T++++I+  +  G L     + + ML+ GL P    Y 
Sbjct: 871  KMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYI 930

Query: 598  VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
             L++A    G ++ AF    EM+  GI P  +  +++I GLCR  ++++A  +F  M   
Sbjct: 931  ALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRS 990

Query: 658  GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            G++P   T+T L++  C      +AL L + M    +  D  +++ L+
Sbjct: 991  GMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLI 1038



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 148/560 (26%), Positives = 267/560 (47%), Gaps = 36/560 (6%)

Query: 175  ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
            I + LL  + ++ M+ +       M R  +  D  + NRII      G  V A  VY  M
Sbjct: 542  IHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDM 601

Query: 235  GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
              +G  P++ TY  +L   C+ G + +A + +  +     + +  T+N L+ G  R G L
Sbjct: 602  VRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTL 661

Query: 295  EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
            ++A  L   M+K       H+Y  ++ G+  KG ++ AL + + M+ +GV P    Y  L
Sbjct: 662  DEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCL 721

Query: 355  IYGLCKWGRVSDARHRFFEML-RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
            + GL   G+V  A + F E++ ++ +  D I+YN+L+ GY +S N+     +  ++    
Sbjct: 722  LNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNE 781

Query: 414  LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
            + P   +YN L+ G  + G    +  L + M+ +GI PD +TY +++ G  + G + +A 
Sbjct: 782  VYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAV 841

Query: 474  EFFNEMLRKGLQPDRF-----------------------------------AYTTQIAGE 498
            +F  +M+ +G+ PDR                                     ++  I G 
Sbjct: 842  KFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGL 901

Query: 499  LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
            ++ G    ++++  EML  G  P+   Y  LV+  C++G ++ A  L  +M   G +P  
Sbjct: 902  IRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAE 961

Query: 559  ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
            +  +SII      G L     +F++M+R G+ PT+ T+T L+H+     ++  A      
Sbjct: 962  VAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRL 1021

Query: 619  MQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGN 678
            M++  +R +V++YN LI GLC+ + I  A  L+ +M+ +G+ PN  TY  L     + G 
Sbjct: 1022 MELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNITTYITLTGAMYSTGR 1081

Query: 679  WQEALRLYKEMLDREIEPDY 698
             Q    L +++ +R + P Y
Sbjct: 1082 VQNGEELLEDIEERGLIPAY 1101



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 116/454 (25%), Positives = 223/454 (49%), Gaps = 1/454 (0%)

Query: 174  KILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRM 233
            K  + LLL   +   +++ L +  KM++N  LPD+     ++      G  + A  + +M
Sbjct: 646  KTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQM 705

Query: 234  MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR-GCSPNGVTYNVLITGFSRNG 292
            M E G+ P  V Y  +L+    EG+++ A  +  E+  + G   + + YN L+ G+ ++ 
Sbjct: 706  MLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSR 765

Query: 293  ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
             +   + ++ DM +  +  ++ SYN ++ GY ++G   ++L L + MV +G+ P   TY 
Sbjct: 766  NVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYR 825

Query: 353  ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
            +LI GL + G +  A     +M+ + + PD + ++ L+  +     +  A  +F+ ++  
Sbjct: 826  LLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWL 885

Query: 413  NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
            ++ P+  T++ +I+GL R G L+ + ++   M+  G+ P+   Y  +VN  C++G +  A
Sbjct: 886  HMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRA 945

Query: 473  REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
                 EM   G+ P   A ++ I G  + G   EA  +   M+  G  P + T+  L+H 
Sbjct: 946  FRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHS 1005

Query: 533  LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
            LCK   + +A  L R M       D ++Y  +I    +   +    DL+  M  KGL P 
Sbjct: 1006 LCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPN 1065

Query: 593  LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRP 626
            + TY  L  A  + GR++       +++ +G+ P
Sbjct: 1066 ITTYITLTGAMYSTGRVQNGEELLEDIEERGLIP 1099



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 98/394 (24%), Positives = 184/394 (46%), Gaps = 26/394 (6%)

Query: 117  QPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGIL------DVLIGGGLSS- 169
            + GV  D   +  +L  LI  G +++A +V   ++C    G+       + L+ G L S 
Sbjct: 708  EKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIIC--KEGLYADCIAYNSLMNGYLKSR 765

Query: 170  -CVSIKIL----------------DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCN 212
               +IK +                ++L+  Y K+    + L ++  M+R G+ PD     
Sbjct: 766  NVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYR 825

Query: 213  RIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR 272
             +I  L + G    A +    M   GI P  + ++ ++ +F ++ +M  AL++   M+  
Sbjct: 826  LLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWL 885

Query: 273  GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA 332
              SP+  T++ +I G  R G L+ +  ++ +ML++GL+ +   Y  ++      G +  A
Sbjct: 886  HMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRA 945

Query: 333  LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
              L+EEM   G+ P     + +I GLC+ G++ +A   F  M+R  ++P + ++ TL++ 
Sbjct: 946  FRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHS 1005

Query: 393  YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
             C+   I +A  L   +    L   VV+YN LI GLC+   +  A  L   M ++G+ P+
Sbjct: 1006 LCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPN 1065

Query: 453  VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
            + TY  +       G +    E   ++  +GL P
Sbjct: 1066 ITTYITLTGAMYSTGRVQNGEELLEDIEERGLIP 1099


>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 578

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 158/538 (29%), Positives = 278/538 (51%), Gaps = 21/538 (3%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   ++  + +F++M+    LP +    +I+  +    +   A ++Y +M   G+ P  V
Sbjct: 31  KFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFTV 90

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           T+N +++ FC  G+M  A  ++ ++   GC PN VT+  L+ GF  N ++  A  +  +M
Sbjct: 91  TFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEM 150

Query: 305 LKLGLKVSAHSYNPIICGY--SEKGLLVEALNLEEEMVTRG-VAPTLATYNILIYGLCKW 361
           +   ++     Y  +I G   S+ G    A+ L ++M  R  V P L  YN +++GLCK 
Sbjct: 151 VARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKD 210

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN----------------IGEAFLL 405
           G +++AR    +M+ + + PDI +Y++L+YG CR+G                 + EA  L
Sbjct: 211 GNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEAREL 270

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
           F+ +  R     ++ YN L++G C    +  A++L   M+ +G  PD ITYTI+++G C 
Sbjct: 271 FNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCL 330

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
           +  +  AR  F+ M+ +GL PD ++Y   I G  K     EA  L E+M  K   P++IT
Sbjct: 331 IDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIIT 390

Query: 526 YNVLVHGLCKLGSLEEANELLRKM-VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM 584
           YN +V GLCK G + +A +L+ +M       PD  TY  ++ +   +  + +    F ++
Sbjct: 391 YNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHL 450

Query: 585 L-RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           +  +  +P + +Y +LI       RL+ A   F+ M  K + P+++TYN L++ L   ++
Sbjct: 451 IFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQ 510

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
           +D+A  L + + ++GI PN  TY ILIN     G  + A ++   +  R   PD  T+
Sbjct: 511 LDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKISLYLSIRGYHPDVKTY 568



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 136/480 (28%), Positives = 228/480 (47%), Gaps = 61/480 (12%)

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
            ++ A  L   M+ +    S   +  I+   ++      A++L   M  +GV P   T+N
Sbjct: 34  SIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFTVTFN 93

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
           ILI   C  G++  A     ++L+    P+++++ TL+ G+C +  + +A  ++DE+ +R
Sbjct: 94  ILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVAR 153

Query: 413 NLVPTVVTYNTLIDGLCR--YGDLEVAQQLKENMIN-QGILPDVITYTIMVNGSCKMGNL 469
            +    V Y TLI+GLC+   G    A QL + M   Q + P++I Y  +V+G CK GN+
Sbjct: 154 RIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKDGNI 213

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD----------------TSEAYRLQEE 513
           + AR   ++M+ +G+ PD F Y++ I G  + G                   EA  L   
Sbjct: 214 NEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARELFNV 273

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           M+ +G   D+I YN+L++G C    + EA +L   MV  G  PD ITYT ++H    +  
Sbjct: 274 MIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLIDK 333

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
           +   R+LF+ M+ +GL P + +Y +LI  +    R+  A     +M +K + PN+ITYN+
Sbjct: 334 VDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNS 393

Query: 634 LINGLCRLRRIDQAYGLFIDME-------------------------------------E 656
           +++GLC+   I  A+ L  +M                                      E
Sbjct: 394 VVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHLIFE 453

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL-----KQLDK 711
               PN ++Y ILI+  C      EA+ L+  M  + + PD  T++ LL      +QLDK
Sbjct: 454 RSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDK 513



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 129/420 (30%), Positives = 208/420 (49%), Gaps = 55/420 (13%)

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE----- 293
           +KP+++ YNT++   CK+G + EA  L  +M  +G  P+  TY+ LI G  R G+     
Sbjct: 193 VKPNLIMYNTVVHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVT 252

Query: 294 -----------LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
                      +++AR L   M++ G +    +YN ++ GY     + EA  L   MV R
Sbjct: 253 SLLNGFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVER 312

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           G  P   TY IL++G C   +V +AR+ F  M+ + ++PD+ SYN L+ GYC+   +GEA
Sbjct: 313 GEQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEA 372

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM-INQGILPDVITYTIMVN 461
             L +++  +NLVP ++TYN+++DGLC+ G +  A +L + M       PDV TY I++ 
Sbjct: 373 MNLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLE 432

Query: 462 GSCKMGNLSMAREFFNEML-RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
             C++  +  A  FF  ++  +   P+ ++Y   I+G  K     EA  L   M  K   
Sbjct: 433 SLCRIECVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLV 492

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           PD++TYN+L+  L     L++A  LL ++V  G                           
Sbjct: 493 PDIVTYNILLDALFNGQQLDKAIALLVQIVDQG--------------------------- 525

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
                   +SP L TY +LI+     GR + A      + ++G  P+V TY  +IN LC+
Sbjct: 526 --------ISPNLRTYNILINGLHKGGRPKTAQKISLYLSIRGYHPDVKTY--IINELCK 575



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 187/366 (51%), Gaps = 19/366 (5%)

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           CK+  + DA   F  M+  + +P I+ +  +L    +      A  L+  +  + +VP  
Sbjct: 30  CKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFT 89

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           VT+N LI+  C  G ++ A  +   ++  G  P+V+T+T ++ G C    +  A   ++E
Sbjct: 90  VTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDE 149

Query: 479 MLRKGLQPDRFAYTTQIAG--ELKLGDTSEAYRLQEEMLAKGF-PPDLITYNVLVHGLCK 535
           M+ + ++ D   Y T I G  + K+G    A +L ++M  +    P+LI YN +VHGLCK
Sbjct: 150 MVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCK 209

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLR----------------RGRD 579
            G++ EA  L  KM+  G  PD  TY+S+I+     G  +                  R+
Sbjct: 210 DGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARE 269

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
           LFN M+ +G    ++ Y +L++ +    ++  A   F  M  +G +P+ ITY  L++G C
Sbjct: 270 LFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYC 329

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
            + ++D+A  LF  M E G++P+ ++Y ILI   C      EA+ L ++M  + + P+  
Sbjct: 330 LIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNII 389

Query: 700 THSALL 705
           T+++++
Sbjct: 390 TYNSVV 395



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 189/371 (50%), Gaps = 20/371 (5%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRD-----------NGFSV-----KAR 228
           K   + +  ++ +KM+  G+ PD+   + +I  L             NGF +     +AR
Sbjct: 209 KDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEAR 268

Query: 229 EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
           E++ +M E G +  I+ YN +++ +C   ++ EA +L   M  RG  P+ +TY +L+ G+
Sbjct: 269 ELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGY 328

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
               ++++AR L   M++ GL     SYN +I GY +   + EA+NL E+M  + + P +
Sbjct: 329 CLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNI 388

Query: 349 ATYNILIYGLCKWGRVSDARHRFFEM-LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFD 407
            TYN ++ GLCK G + DA     EM       PD+ +YN LL   CR   + +A   F 
Sbjct: 389 ITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFK 448

Query: 408 EL-RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
            L   R+  P V +YN LI G C+   L+ A  L  +M  + ++PD++TY I+++     
Sbjct: 449 HLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNG 508

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
             L  A     +++ +G+ P+   Y   I G  K G    A ++   +  +G+ PD+ TY
Sbjct: 509 QQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKISLYLSIRGYHPDVKTY 568

Query: 527 NVLVHGLCKLG 537
             +++ LCK G
Sbjct: 569 --IINELCKGG 577



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 201/401 (50%), Gaps = 20/401 (4%)

Query: 103 KPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNM--HGIL- 159
           KPR A++  + +E +  VK +  ++ T++  L + G +  A      V+C  M   GI  
Sbjct: 176 KPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKDGNINEA-----RVLCSKMIVQGIFP 230

Query: 160 DVLIGG----GLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRII 215
           D+        GL      K +  LL  +   + V++   +FN M+  G   D+ N N ++
Sbjct: 231 DIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARELFNVMIERGEQHDIINYNILM 290

Query: 216 KVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCS 275
                N    +AR+++ MM E G +P  +TY  ++  +C   ++ EA  L   M  RG  
Sbjct: 291 NGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLV 350

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           P+  +YN+LI G+ +   + +A  L+ DM    L  +  +YN ++ G  + G +++A  L
Sbjct: 351 PDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWKL 410

Query: 336 EEEM-VTRGVAPTLATYNILIYGLCKWGRVSDA----RHRFFEMLRKNVIPDIISYNTLL 390
            +EM       P + TYNIL+  LC+   V  A    +H  FE   ++  P++ SYN L+
Sbjct: 411 VDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHLIFE---RSFAPNVWSYNILI 467

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
            G C++  + EA  LF+ +  +NLVP +VTYN L+D L     L+ A  L   +++QGI 
Sbjct: 468 SGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDKAIALLVQIVDQGIS 527

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAY 491
           P++ TY I++NG  K G    A++    +  +G  PD   Y
Sbjct: 528 PNLRTYNILINGLHKGGRPKTAQKISLYLSIRGYHPDVKTY 568



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 72/298 (24%), Positives = 129/298 (43%), Gaps = 54/298 (18%)

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
            +CK  ++  A   F+ M+     P    +T  +    K+   + A  L   M  KG  P
Sbjct: 28  STCKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVP 87

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS------------------ 563
             +T+N+L++  C +G ++ A  ++ K++  G  P+ +T+T+                  
Sbjct: 88  FTVTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIY 147

Query: 564 ------------IIHASL-------EMGDLRRGRDLFNNM-LRKGLSPTLVTYTVLIHAH 603
                       +++ +L       ++G  R    L   M  R+ + P L+ Y  ++H  
Sbjct: 148 DEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGL 207

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL----------------RRIDQA 647
              G +  A +  S+M V+GI P++ TY++LI GLCR                  ++D+A
Sbjct: 208 CKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEA 267

Query: 648 YGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             LF  M E G   +   Y IL+N  C      EA +L+  M++R  +PD  T++ L+
Sbjct: 268 RELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILM 325


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 140/487 (28%), Positives = 255/487 (52%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K+   ++    +++ML   + PDV   + II  L       KA EV   M + G+ P+
Sbjct: 206 FFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPN 265

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            +TYN++L  +C   + +EA+  L +M+  G  P+ VTYN L+    +NG   +AR +  
Sbjct: 266 CMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFD 325

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M K GL+    +Y  ++ GY+ KG LVE   L + MV  G+ P    +NILI    K  
Sbjct: 326 SMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQE 385

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           +V +A   F +M +  + P++++Y  ++   C+SG++ +A L F+++    L P ++ Y 
Sbjct: 386 KVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYT 445

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           +LI  LC +   + A++L   M+++GI  + I +  +++  CK G +  + + F+ M+R 
Sbjct: 446 SLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRI 505

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G++P+   Y+T I G    G   EA +L   M + G  PD +TYN L++G C++  +++A
Sbjct: 506 GVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDA 565

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             L ++MV  G  P+ ITY  I+            ++L+  + + G    L TY +++H 
Sbjct: 566 LALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHG 625

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
                  + A   F  + +  ++    T+N +I  L ++ R D+A  LF  +   G++P+
Sbjct: 626 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 685

Query: 663 KYTYTIL 669
             TY+++
Sbjct: 686 VRTYSLM 692



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 143/445 (32%), Positives = 228/445 (51%), Gaps = 3/445 (0%)

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM---QGRGCSPNGVTYNVLIT 286
           V R M E    P + +   +L   C E   QEALELL  M   +G G +P+ V+Y  +I 
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVIN 204

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           GF + G+ ++A     +ML   +     +Y+ II    +   + +A+ +   MV  GV P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMP 264

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
              TYN +++G C   +  +A     +M    V PD+++YN+L+   C++G   EA  +F
Sbjct: 265 NCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIF 324

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
           D +  R L P + TY TL+ G    G L     L + M+  GI PD   + I++    K 
Sbjct: 325 DSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQ 384

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
             +  A   F++M + GL P+   Y   I    K G   +A    E+M+ +G  P++I Y
Sbjct: 385 EKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVY 444

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
             L+H LC     ++A EL+ +M+  G   + I + SIIH+  + G +     LF+ M+R
Sbjct: 445 TSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVR 504

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
            G+ P ++TY+ LI  +   G+++ A    S M   G++P+ +TYN LING CR+ R+D 
Sbjct: 505 IGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDD 564

Query: 647 AYGLFIDMEEEGILPNKYTYTILIN 671
           A  LF +M   G+ PN  TY I++ 
Sbjct: 565 ALALFKEMVSSGVSPNIITYNIILQ 589



 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 159/547 (29%), Positives = 265/547 (48%), Gaps = 38/547 (6%)

Query: 194 LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE---FGIKPSIVTYNTML 250
           +V  +M     +PDV +C  ++K L D   S +A E+  MM +    G  P +V+Y T++
Sbjct: 144 IVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVI 203

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
           + F KEG+  +A     EM  R  SP+ VTY+ +I    +   +++A  ++  M+K G+ 
Sbjct: 204 NGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVM 263

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
            +  +YN I+ GY       EA+   ++M + GV P + TYN L+  LCK GR ++AR  
Sbjct: 264 PNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKI 323

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSG--------------------------------- 397
           F  M ++ + PDI +Y TLL GY   G                                 
Sbjct: 324 FDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAK 383

Query: 398 --NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
              + EA L+F ++R   L P VVTY  +I  LC+ G ++ A    E MI++G+ P++I 
Sbjct: 384 QEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIV 443

Query: 456 YTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML 515
           YT +++  C       A E   EML +G+  +   + + I    K G   E+ +L + M+
Sbjct: 444 YTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMV 503

Query: 516 AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLR 575
             G  P++ITY+ L+ G C  G ++EA +LL  M   G  PD +TY ++I+    +  + 
Sbjct: 504 RIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMD 563

Query: 576 RGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALI 635
               LF  M+  G+SP ++TY +++       R   A   +  +   G +  + TYN ++
Sbjct: 564 DALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIIL 623

Query: 636 NGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIE 695
           +GLC+    D+A  +F ++    +     T+ I+I      G   EA  L+  +    + 
Sbjct: 624 HGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLV 683

Query: 696 PDYCTHS 702
           PD  T+S
Sbjct: 684 PDVRTYS 690



 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 149/552 (26%), Positives = 257/552 (46%), Gaps = 41/552 (7%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM--GEFGIKPSIVTYNTMLDS 252
           VF ++LR G    +   NR +  +  +  +       RM   G   + P++ TY  ++  
Sbjct: 37  VFEELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYGILIGC 96

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI-RDMLKL---- 307
            C+ G +      L  +  +G     +T+  L+ G   +     A  ++ R M +L    
Sbjct: 97  CCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMP 156

Query: 308 ----------------------------------GLKVSAHSYNPIICGYSEKGLLVEAL 333
                                             G      SY  +I G+ ++G   +A 
Sbjct: 157 DVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAY 216

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
           +   EM+ R ++P + TY+ +I  LCK   +  A      M++  V+P+ ++YN++L+GY
Sbjct: 217 STYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGY 276

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
           C S    EA     ++RS  + P VVTYN+L+D LC+ G    A+++ ++M  +G+ PD+
Sbjct: 277 CSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDI 336

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
            TY  ++ G    G L       + M+R G+ PD   +   I    K     EA  +  +
Sbjct: 337 ATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSK 396

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           M   G  P+++TY  ++  LCK GS+++A     +M+ +G  P+ I YTS+IH+      
Sbjct: 397 MRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDK 456

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
             +  +L   ML +G+    + +  +IH+H   GR+  +   F  M   G++PNVITY+ 
Sbjct: 457 WDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYST 516

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
           LI+G C   ++D+A  L   M   G+ P+  TY  LIN  C      +AL L+KEM+   
Sbjct: 517 LIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSG 576

Query: 694 IEPDYCTHSALL 705
           + P+  T++ +L
Sbjct: 577 VSPNIITYNIIL 588



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 140/508 (27%), Positives = 246/508 (48%), Gaps = 36/508 (7%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   +++ + V   M++NG++P+    N I+     +    +A    + M   G++P +V
Sbjct: 243 KGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVV 302

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TYN+++D  CK G   EA ++   M  RG  P+  TY  L+ G++  G L +   L+  M
Sbjct: 303 TYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLM 362

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           ++ G+    H +N +IC Y+++  + EA+ +  +M   G+ P + TY  +I  LCK G V
Sbjct: 363 VRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSV 422

Query: 365 SDARHRFFEMLRKNVIPDIISY-----------------------------------NTL 389
            DA   F +M+ + + P+II Y                                   N++
Sbjct: 423 DDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSI 482

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
           ++ +C+ G + E+  LFD +    + P V+TY+TLIDG C  G ++ A +L  +M + G+
Sbjct: 483 IHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGM 542

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
            PD +TY  ++NG C++  +  A   F EM+  G+ P+   Y   + G      T+ A  
Sbjct: 543 KPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKE 602

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           L   +   G   +L TYN+++HGLCK    +EA  + + +       +  T+  +I A L
Sbjct: 603 LYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 662

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
           ++G     +DLF  +   GL P + TY+++      +G LE     F  M+  G   N  
Sbjct: 663 KVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSR 722

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEE 657
             N+++  L +   I +A G ++ M +E
Sbjct: 723 MLNSIVRKLLQRGDITRA-GTYLSMIDE 749



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 132/442 (29%), Positives = 198/442 (44%), Gaps = 43/442 (9%)

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG---VAPTLATY 351
           E AR +  ++L+ G   S +  N  +   +       A++    M   G   V PT+ TY
Sbjct: 32  EDARHVFEELLRRGRGASIYGLNRALADVARHSP-AAAVSRYNRMARAGAGKVTPTVHTY 90

Query: 352 NILI-----------------------------------YGLCKWGRVSDARHRFF-EML 375
            ILI                                    GLC   R SDA       M 
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL---RSRNLVPTVVTYNTLIDGLCRYG 432
             + +PD+ S   LL G C      EA  L   +   R     P VV+Y T+I+G  + G
Sbjct: 151 ELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEG 210

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
           D + A      M+++ I PDV+TY+ ++   CK   +  A E    M++ G+ P+   Y 
Sbjct: 211 DSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYN 270

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
           + + G        EA    ++M + G  PD++TYN L+  LCK G   EA ++   M   
Sbjct: 271 SILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKR 330

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
           G  PD  TY +++      G L     L + M+R G+ P    + +LI A+A + +++ A
Sbjct: 331 GLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEA 390

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
            + FS+M+  G+ PNV+TY A+I  LC+   +D A   F  M +EG+ PN   YT LI+ 
Sbjct: 391 MLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHS 450

Query: 673 NCNAGNWQEALRLYKEMLDREI 694
            C    W +A  L  EMLDR I
Sbjct: 451 LCIFDKWDKAEELILEMLDRGI 472



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 137/498 (27%), Positives = 234/498 (46%), Gaps = 15/498 (3%)

Query: 102 EKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDV 161
           E+P+ A+ F + + +  GV+ D   + ++++ L ++G    A              I D 
Sbjct: 280 EQPKEAIGFLKKMRSD-GVEPDVVTYNSLMDYLCKNGRSTEA------------RKIFDS 326

Query: 162 LIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDN 221
           +   GL     I     LL  Y  K  + +   + + M+RNG+ PD    N +I      
Sbjct: 327 MTKRGLEP--DIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQ 384

Query: 222 GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY 281
               +A  V+  M + G+ P++VTY  ++   CK G + +A+    +M   G +PN + Y
Sbjct: 385 EKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVY 444

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
             LI       + ++A  LI +ML  G+ ++   +N II  + ++G ++E+  L + MV 
Sbjct: 445 TSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVR 504

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
            GV P + TY+ LI G C  G++ +A      M    + PD ++YNTL+ GYCR   + +
Sbjct: 505 IGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDD 564

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           A  LF E+ S  + P ++TYN ++ GL        A++L   +   G   ++ TY I+++
Sbjct: 565 ALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILH 624

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
           G CK      A   F  +    LQ +   +   I   LK+G   EA  L   + A G  P
Sbjct: 625 GLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVP 684

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           D+ TY+++   L + G LEE ++L   M  +G   +     SI+   L+ GD+ R     
Sbjct: 685 DVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYL 744

Query: 582 NNMLRKGLSPTLVTYTVL 599
           + +  K  S    T ++L
Sbjct: 745 SMIDEKHFSLEASTASLL 762


>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
 gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
          Length = 741

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 147/513 (28%), Positives = 248/513 (48%), Gaps = 14/513 (2%)

Query: 205 LPDVKNCNRIIKVLRDNGF-----SVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEM 259
           +P ++  N ++  L  +G      S+ AR   R         ++ TY T+++++C  G++
Sbjct: 40  VPPIRCLNTLLMALARHGMLSDMESLAARMPVR---------NLHTYTTLINAYCHAGDL 90

Query: 260 QEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI 319
             A   L  +   G +P+   Y   + G+ R G    A  L   M + G   +  +Y  +
Sbjct: 91  PAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAAL 150

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           + G    G++ EA+ +   M   G AP    Y+I+++GLC  GR  +A     + + K  
Sbjct: 151 LQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGF 210

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
           +P++  YN L+ GYC +G++  A  +F  ++S+  +P V TY  LI G C+ G +E A  
Sbjct: 211 VPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMV 270

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           L   MI  G+ P+V+TYT ++ G C  G+L  A    + M   GL P+ +     I    
Sbjct: 271 LYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALC 330

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           K G   EA +    ++ KG   + + Y  ++  LCK G  + A+ L++K++ +GF+PD  
Sbjct: 331 KHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAH 390

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
            Y+S+I        L     L N+M+  G+    V +T+LI  H    R +   M    M
Sbjct: 391 MYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRM 450

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
              G++P+V+TY   I   C+  R++ A  + I M + G+ PN  TY  LI    N G  
Sbjct: 451 AAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLV 510

Query: 680 QEALRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
            +A    K M+D   +P+  +++ LL   L K+
Sbjct: 511 SQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKN 543



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 142/545 (26%), Positives = 242/545 (44%), Gaps = 54/545 (9%)

Query: 188 MVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
           MV + + VF  M  +G  PD    + ++  L   G + +A  +       G  P++  YN
Sbjct: 159 MVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYN 218

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
            ++D +C  G+++ A+++   MQ +GC PN  TY  LI GF ++G++E+A  L   M++ 
Sbjct: 219 ALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEA 278

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           GL  +  +Y  +I G   +G L  A  L   M   G+AP   T  +LI  LCK GR+ +A
Sbjct: 279 GLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEA 338

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
           +     +++K +  + + Y +++   C+SG    A  L  ++ +   VP    Y++LIDG
Sbjct: 339 QQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDG 398

Query: 428 LCRYGDLEVAQQLKENMINQGIL-----------------------------------PD 452
           LCR   L  A  L  +MI  G+                                    PD
Sbjct: 399 LCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPD 458

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
           V+TYT+ +   C+ G +  A     +M+  G++P+   Y T I G   LG  S+A+   +
Sbjct: 459 VVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLK 518

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
            M+  G  P+  +Y VL+ GL           LL+K      + D I+   I+       
Sbjct: 519 NMIDNGCKPNDESYTVLL-GL-----------LLKKNSYHDLVADSISLWKIV------- 559

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
           D++   +L   +++   S     Y   I   +   RLE A  +   MQ   + P+   Y 
Sbjct: 560 DMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYT 619

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
            +I    R++ + +A      M +   LP   +Y  +I   C  G++  A  ++ ++L +
Sbjct: 620 CMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSK 679

Query: 693 EIEPD 697
           E   D
Sbjct: 680 EYNRD 684



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 151/612 (24%), Positives = 262/612 (42%), Gaps = 38/612 (6%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVV-----------ETVVCVNM 155
           A R F  +  Q G  R  F +  +L+ L  +G++R A  V              V  + +
Sbjct: 128 ACRLF-LLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMV 186

Query: 156 HGILDVLIGG----------GLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLL 205
           HG+      G          G     ++ + + L+  Y     +E  + +F  M   G L
Sbjct: 187 HGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCL 246

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P+V+   ++I     +G   +A  +Y  M E G+ P++VTY T++   C EG ++ A  L
Sbjct: 247 PNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRL 306

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           L  M+  G +PN  T  VLI    ++G +E+A+  +  +++ G+KV+   Y  +I    +
Sbjct: 307 LHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCK 366

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
            G    A NL ++++T G  P    Y+ LI GLC+  ++ +A     +M+   V  + + 
Sbjct: 367 SGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVP 426

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           +  L+  + R        ++ D + +  + P VVTY   I   C+ G +E A+ +   MI
Sbjct: 427 FTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMI 486

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK----- 500
           + G+ P++ TY  ++ G   +G +S A      M+  G +P+  +YT  +   LK     
Sbjct: 487 DHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYH 546

Query: 501 --LGDTSEAYR---------LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
             + D+   ++         L EE++          Y+  +  L K+  LEEA   L  M
Sbjct: 547 DLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGM 606

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRL 609
                 P    YT +I     M  L+      ++M+++   P L +Y  +I A    G  
Sbjct: 607 QSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSF 666

Query: 610 ELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL 669
             A   F ++  K    + I +  LI+GL +         L   MEE+   P    Y+ L
Sbjct: 667 HTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRL 726

Query: 670 INENCNAGNWQE 681
             E       QE
Sbjct: 727 TGEITVTSEAQE 738



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 105/234 (44%)

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           YTT I      GD   A R    +L  G  PD   Y   V G C+ G    A  L   M 
Sbjct: 77  YTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMP 136

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
             G      TY +++      G +R    +F  M   G +P    Y++++H     GR  
Sbjct: 137 QRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAG 196

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
            A    ++   KG  PNV  YNALI+G C    ++ A  +F  M+ +G LPN  TYT LI
Sbjct: 197 EAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLI 256

Query: 671 NENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
              C +G  + A+ LY  M++  + P+  T++ L+  Q  + +  HA   L S+
Sbjct: 257 CGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSM 310


>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 163/607 (26%), Positives = 290/607 (47%), Gaps = 63/607 (10%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           D LL + +   M+++   +++ M ++G +P  ++ NR+++ L D+    K   V+  + +
Sbjct: 91  DNLLWLCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVID 150

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G +P  V Y   + +     ++ +  EL+  M   G  P+   YN+++ G  +   ++ 
Sbjct: 151 SGTRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKD 210

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           AR L  +M++  +  +  +YN +I GY + G + EAL  +E M  + V   L TYN L+ 
Sbjct: 211 ARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLN 270

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIP----------------------------DIISYNT 388
           GLC  GRV DAR    EM     +P                            D  +Y  
Sbjct: 271 GLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCI 330

Query: 389 LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
           LL G CR G I +A  +  +L    + P+ ++YN L++  C+ GD++ A    E M  +G
Sbjct: 331 LLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERG 390

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
           + P+ IT+  +++  C+ G +  A  +   M+ KG+ P    Y + I G  + G     +
Sbjct: 391 LEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCF 450

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
              +EM   G  P++I+Y  L++ LCK   L +A  +L  M+G G  P+   Y  +I AS
Sbjct: 451 EFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEAS 510

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
             +  L+     F+ M++ G+  TLVTY  LI+     GR++ A   F +M  KG  P+V
Sbjct: 511 CSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDV 570

Query: 629 ITYNALING----------------------------------LCRLRRIDQAYGLFIDM 654
           ITYN+LI+G                                   CR   +     +F +M
Sbjct: 571 ITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMDKMFQEM 630

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYK 714
            +  ++P+++ Y  +I      GN  +A+ L+++M+D+ ++ D  T+++L+L  L +D +
Sbjct: 631 LQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYL-RDRR 689

Query: 715 VHAVEYL 721
           V  +++L
Sbjct: 690 VSEIKHL 696



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 154/526 (29%), Positives = 264/526 (50%), Gaps = 29/526 (5%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F++M++  ++P+    N +I      G   +A      M E  ++ ++VTYN++L+  C
Sbjct: 214 LFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLC 273

Query: 255 KEGEMQEALELLWEMQGRGCSPNGV----------------------------TYNVLIT 286
             G + +A E+L EM+G G  P G                             TY +L+ 
Sbjct: 274 GSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLN 333

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G  R G +E+A  ++  +++ G+  S  SYN ++  Y ++G + +A+   E+M  RG+ P
Sbjct: 334 GLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEP 393

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
              T+N +I   C+ G V  A      M+ K V P + +YN+L+ GY + G+    F   
Sbjct: 394 NRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFL 453

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
           DE+    + P V++Y +LI+ LC+   L  A+ +  +MI +G+ P+   Y +++  SC +
Sbjct: 454 DEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSL 513

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
             L  A  FF+EM++ G+      Y T I G  + G   +A  L  +M  KG  PD+ITY
Sbjct: 514 SKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITY 573

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           N L+ G  K  + ++  EL  KM   G  P   T+  +I+A  + G +   + +F  ML+
Sbjct: 574 NSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMDK-MFQEMLQ 632

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
             L P    Y  +I+++A  G +  A     +M  +G+  + +TYN+LI    R RR+ +
Sbjct: 633 MDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSE 692

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
              L  DM+ +G++P   TY ILI   C+  ++  A   Y+EM++R
Sbjct: 693 IKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVER 738



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 133/413 (32%), Positives = 221/413 (53%), Gaps = 1/413 (0%)

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           KA EV   + E G+ PS ++YN +++++C+EG++++A+    +M+ RG  PN +T+N +I
Sbjct: 343 KAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVI 402

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
           + F   GE++ A   +R M++ G+  +  +YN +I GY +KG  V      +EM   G+ 
Sbjct: 403 SKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIK 462

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P + +Y  LI  LCK  ++ DA     +M+ + V P+   YN L+   C    + +AF  
Sbjct: 463 PNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRF 522

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
           FDE+    +  T+VTYNTLI+GL R G ++ A+ L   M  +G  PDVITY  +++G  K
Sbjct: 523 FDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAK 582

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
             N     E +++M   G++P    +   I    K G  +   ++ +EML     PD   
Sbjct: 583 SVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVT-MDKMFQEMLQMDLVPDQFV 641

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           YN +++   + G++ +A  L ++MV  G   D +TY S+I A L    +   + L ++M 
Sbjct: 642 YNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMK 701

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
            KGL P + TY +LI           A+ ++ EM  +G+  NV     LI+GL
Sbjct: 702 AKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGL 754



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 134/459 (29%), Positives = 219/459 (47%), Gaps = 15/459 (3%)

Query: 120 VKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLL 179
           ++ DE  +C +L  L   G +  A  V+  +V             G   S +S  IL   
Sbjct: 321 IRIDERTYCILLNGLCRVGRIEKAEEVLAKLV-----------ENGVTPSKISYNIL--- 366

Query: 180 LLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGI 239
           +  Y ++  V++ +L   +M   GL P+    N +I    + G    A    R M E G+
Sbjct: 367 VNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGV 426

Query: 240 KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
            P++ TYN++++ + ++G      E L EM   G  PN ++Y  LI    ++ +L  A  
Sbjct: 427 SPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEI 486

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
           ++ DM+  G+  +A  YN +I        L +A    +EM+  G+  TL TYN LI GL 
Sbjct: 487 VLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLG 546

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
           + GRV  A   F +M  K   PD+I+YN+L+ GY +S N  +   L+D+++   + PTV 
Sbjct: 547 RNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVG 606

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
           T++ LI   CR   +    ++ + M+   ++PD   Y  M+    + GN+  A     +M
Sbjct: 607 TFHPLIYA-CRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQM 665

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
           + +G+  D+  Y + I   L+    SE   L ++M AKG  P + TYN+L+ GLC L   
Sbjct: 666 VDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDF 725

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
             A    R+MV  G + +      +I    E G LR  +
Sbjct: 726 NGAYFWYREMVERGLLLNVSMCYQLISGLREEGMLREAQ 764



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 125/436 (28%), Positives = 214/436 (49%), Gaps = 1/436 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +E+   V  K++ NG+ P   + N ++      G   KA      M E G++P+ +T+NT
Sbjct: 341 IEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNT 400

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++  FC+ GE+  A   +  M  +G SP   TYN LI G+ + G   +    + +M K G
Sbjct: 401 VISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAG 460

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           +K +  SY  +I    +   L++A  +  +M+ RGV+P    YN+LI   C   ++ DA 
Sbjct: 461 IKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAF 520

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F EM++  +   +++YNTL+ G  R+G + +A  LF ++  +   P V+TYN+LI G 
Sbjct: 521 RFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGY 580

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
            +  + +   +L + M   GI P V T+  ++    K G ++M +  F EML+  L PD+
Sbjct: 581 AKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMDK-MFQEMLQMDLVPDQ 639

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
           F Y   I    + G+  +A  L ++M+ +G   D +TYN L+    +   + E   L+  
Sbjct: 640 FVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDD 699

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M   G +P   TY  +I    ++ D       +  M+ +GL   +     LI      G 
Sbjct: 700 MKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLREEGM 759

Query: 609 LELAFMYFSEMQVKGI 624
           L  A +  SE+ + G+
Sbjct: 760 LREAQIVSSELSIGGL 775



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 102/399 (25%), Positives = 189/399 (47%), Gaps = 30/399 (7%)

Query: 358 LCKWGRVSDARHRFFEMLRKN-VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           LC   ++ D     +  +RK+  +P   S N LL     S +  +   +F ++      P
Sbjct: 96  LCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRP 155

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
             V Y   +       DL+   +L ++M+  G+ P V  Y +++ G CK+  +  AR+ F
Sbjct: 156 DAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLF 215

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           +EM+++ + P+   Y T I G  K+G   EA   +E M  +    +L+TYN L++GLC  
Sbjct: 216 DEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGS 275

Query: 537 GSLEEANELLRKMVGDGFIP----------------------------DHITYTSIIHAS 568
           G +++A E+L +M G GF+P                            D  TY  +++  
Sbjct: 276 GRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGL 335

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
             +G + +  ++   ++  G++P+ ++Y +L++A+   G ++ A +   +M+ +G+ PN 
Sbjct: 336 CRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNR 395

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
           IT+N +I+  C    +D A      M E+G+ P   TY  LIN     G++        E
Sbjct: 396 ITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDE 455

Query: 689 MLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLG 727
           M    I+P+  ++ + L+  L KD K+   E + +  +G
Sbjct: 456 MDKAGIKPNVISYGS-LINCLCKDRKLIDAEIVLADMIG 493


>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 1 [Brachypodium distachyon]
 gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 2 [Brachypodium distachyon]
          Length = 704

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 167/537 (31%), Positives = 283/537 (52%), Gaps = 11/537 (2%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRN-GLLPDVKNCNRIIKV-LRDNGFS-VKAREVYRMM 234
           ++L  +++  M +  L  F ++    G  P V++ N ++   +R   FS   A       
Sbjct: 89  VVLSAFSRALMPDAALAAFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDADAFFASLSH 148

Query: 235 GEFG--IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
           G FG  I P++ TYN ML S C  G++  A+ L   ++ RG +P+ +TY+ L++GF +N 
Sbjct: 149 GAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNN 208

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV-TRGVAPTLATY 351
            L+ A  L+ +M    ++  A  YN ++ G    G   +A+ + E++V   G +P LATY
Sbjct: 209 RLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATY 268

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           N+++ GLCK G   +A   +  M+  N  PD+I+Y T+++G CRS ++  A  ++ E+  
Sbjct: 269 NVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIK 328

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
             LVP VV YN+L+ G C  G +  A +  ++M   GI  +V +Y IM+ G    G +  
Sbjct: 329 TGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDK 387

Query: 472 AREFFNEMLRK--GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
           A + + E+L K   L PD   ++T I G  + G  +++ ++ EE    G   D  +Y+ +
Sbjct: 388 ATDLW-ELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSM 446

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           + GLCK G L++A +L  K+  D F P+   Y ++I+   +         +++ M     
Sbjct: 447 ISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDC 506

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
           SPT +TY  LIH      +   A  +  EM  KG   +V TY +LI GLCR ++ID A  
Sbjct: 507 SPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALA 566

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR-EIEPDYCTHSALL 705
           L+  + ++G+  +   + ILI+  C+AG   EA +L  EM ++    P+  T++ L+
Sbjct: 567 LWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLM 623



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 160/542 (29%), Positives = 262/542 (48%), Gaps = 43/542 (7%)

Query: 204 LLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEAL 263
           + P+++  N +++ L   G   +A  ++  +   G+ P  +TY+T++  F K   +  AL
Sbjct: 155 IAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNAL 214

Query: 264 ELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA----RGLIRDMLKLGLKVSAHSYNPI 319
            LL EM      P+ V YN L+ G  RNGE E+A      L+RD    G   +  +YN +
Sbjct: 215 YLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDP---GASPNLATYNVM 271

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           + G  + G+  EA ++ E MV     P + TY  +I+GLC+   V  A   + EM++  +
Sbjct: 272 LDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGL 331

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDEL------------------------------ 409
           +PD++ YN+LL G+C +G +GEA+  +D +                              
Sbjct: 332 VPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDL 391

Query: 410 -----RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
                +  +L P +VT++T+I GLC  G    + Q+ E     G   D  +Y+ M++G C
Sbjct: 392 WELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLC 451

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
           K G L  A + + ++     +P+   Y   I G  +    S+A R+  +M      P  I
Sbjct: 452 KDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTI 511

Query: 525 TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM 584
           TYN L+HGLCK     EA+   R+M+  G + D  TY S+I        +     L+N +
Sbjct: 512 TYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQI 571

Query: 585 LRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK-GIRPNVITYNALINGLCRLRR 643
           L KGL   +V + +LIH   + G+++ A    SEM+ K    PNV+TYN L++G      
Sbjct: 572 LDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGC 631

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSA 703
            D+A  L++ + E G++P+  +Y   I   C+     E ++L  EML   I P   T + 
Sbjct: 632 FDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNI 691

Query: 704 LL 705
           L+
Sbjct: 692 LV 693



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 130/497 (26%), Positives = 230/497 (46%), Gaps = 41/497 (8%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMGEFGIKP 241
           + K + ++  L + ++M    + PD    N ++     NG   KA  V+ +++ + G  P
Sbjct: 204 FVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASP 263

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
           ++ TYN MLD  CK G  +EA ++   M      P+ +TY  +I G  R+ +++ A  + 
Sbjct: 264 NLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVY 323

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
            +M+K GL      YN ++ G+   G + EA    + M   G+   + +YNI++ GL   
Sbjct: 324 SEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKGLFDG 382

Query: 362 GRVSDARHRFFEMLRKN--VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
           G V  A    +E+L K+  + PD+++++T+++G C  G   ++  + +E R+        
Sbjct: 383 GMVDKATD-LWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEF 441

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
           +Y+++I GLC+ G L+ A +L E +      P+   Y  ++NG C+    S A   +++M
Sbjct: 442 SYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQM 501

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG--------------------- 518
                 P    Y T I G  K     EA R   EML KG                     
Sbjct: 502 AENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKI 561

Query: 519 --------------FPPDLITYNVLVHGLCKLGSLEEANELLRKMV-GDGFIPDHITYTS 563
                            D++ +N+L+HGLC  G ++EA++LL +M   +   P+ +TY +
Sbjct: 562 DGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNT 621

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           ++    E G   +   L+  +L  GL P +++Y   I    +  R        +EM   G
Sbjct: 622 LMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASG 681

Query: 624 IRPNVITYNALINGLCR 640
           I P  IT+N L+  + +
Sbjct: 682 IIPTAITWNILVRAVIK 698



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 125/429 (29%), Positives = 211/429 (49%), Gaps = 3/429 (0%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K  M ++   V+ +M+ N   PD+     +I  L  +     A  VY  M + G+ P +V
Sbjct: 277 KLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVV 336

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
            YN++L  FC  G + EA +  W+        N  +YN+++ G    G +++A  L   +
Sbjct: 337 IYNSLLKGFCHAGRVGEAWKF-WDSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELL 395

Query: 305 LKL-GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
            K   L     +++ +I G  EKG   ++L + EE  T G      +Y+ +I GLCK GR
Sbjct: 396 EKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGR 455

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           + DA   + ++   +  P+   YN L+ G+C++    +A  ++ ++   +  PT +TYNT
Sbjct: 456 LDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNT 515

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           LI GLC+      A +    M+ +G + DV TY  ++ G C+   +  A   +N++L KG
Sbjct: 516 LIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKG 575

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG-FPPDLITYNVLVHGLCKLGSLEEA 542
           LQ D   +   I G    G   EA +L  EM  K    P+++TYN L+ G  + G  ++A
Sbjct: 576 LQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKA 635

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             L   ++ +G +PD I+Y + I           G  L N ML  G+ PT +T+ +L+ A
Sbjct: 636 ASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRA 695

Query: 603 HAARGRLEL 611
               G +++
Sbjct: 696 VIKYGPIQI 704



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 130/459 (28%), Positives = 226/459 (49%), Gaps = 28/459 (6%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVN-----------M 155
           A+R +  +   PG   +   +  +L+ L + G+ + A  V E +V  N           +
Sbjct: 248 AMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMI 307

Query: 156 HGIL---DV---------LIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNG 203
           HG+    DV         +I  GL     + I + LL  +     V +    ++ M  +G
Sbjct: 308 HGLCRSTDVDSAARVYSEMIKTGLVP--DVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSG 365

Query: 204 LLPDVKNCNRIIKVLRDNGFSVKAREVYRMM-GEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           +  +V + N ++K L D G   KA +++ ++  +  + P +VT++TM+   C++G   ++
Sbjct: 366 IR-NVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKS 424

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
           L++L E +  G   +  +Y+ +I+G  ++G L+ A  L   +     K ++H YN +I G
Sbjct: 425 LQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALING 484

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
           + +     +A+ +  +M     +PT  TYN LI+GLCK  +  +A     EML K  + D
Sbjct: 485 FCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLD 544

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
           + +Y +L+ G CR   I  A  L++++  + L   VV +N LI GLC  G ++ A QL  
Sbjct: 545 VNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLS 604

Query: 443 NMINQ-GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
            M  +    P+V+TY  +++G  + G    A   +  +L  GL PD  +Y T+I G    
Sbjct: 605 EMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSC 664

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
             T E  +L  EMLA G  P  IT+N+LV  + K G ++
Sbjct: 665 NRTPEGVQLLNEMLASGIIPTAITWNILVRAVIKYGPIQ 703


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 153/498 (30%), Positives = 241/498 (48%), Gaps = 35/498 (7%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V   M   G   D  NCN ++  + + G   +A  + R +  FG +  IV+YN +L   C
Sbjct: 168 VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLC 227

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
                 +  EL+ EM    C+PN VT+N LI    RNG  E+   ++  M       S H
Sbjct: 228 MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQM-------SEH 280

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
                                       G  P +  Y  +I G+CK G +  A      M
Sbjct: 281 ----------------------------GCTPDIRMYATIIDGICKEGHLEVANEILNRM 312

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
               + P+++ YNT+L G C +    EA  L  E+  ++     VT+N L+D  C+ G +
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLV 372

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           +   +L E M++ G +PDVITYT ++NG CK G +  A      M   G +P+  +YT  
Sbjct: 373 DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIV 432

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           + G    G   +A  L  +M+ +G PP+ +T+N L++ LCK G +E+A ELL++M+ +G 
Sbjct: 433 LKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            PD I+Y+++I    + G      +L N M+ KG+SP  + Y+ +  A +  GR+     
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQ 552

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F  ++   IR + + YNA+I+ LC+    D+A   F  M   G +PN+ TYT+LI    
Sbjct: 553 MFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLA 612

Query: 675 NAGNWQEALRLYKEMLDR 692
           + G  +EA  L  E+  R
Sbjct: 613 SEGLAKEAQELLSELCSR 630



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 199/388 (51%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           +I   + L+    +  + E+   V  +M  +G  PD++    II  +   G    A E+ 
Sbjct: 250 NIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEIL 309

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M  +G+KP++V YNT+L   C     +EA ELL EM  + C  + VT+N+L+  F +N
Sbjct: 310 NRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQN 369

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G +++   L+  ML  G      +Y  +I G+ ++GL+ EA+ L + M + G  P   +Y
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSY 429

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
            I++ GLC  GR  DA     +M+++   P+ +++NTL+   C+ G + +A  L  ++  
Sbjct: 430 TIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLV 489

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
               P +++Y+T+IDGL + G  E A +L   M+N+GI P+ I Y+ +     + G ++ 
Sbjct: 490 NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNK 549

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
             + F+ +    ++ D   Y   I+   K  +T  A      M++ G  P+  TY +L+ 
Sbjct: 550 VIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIK 609

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHI 559
           GL   G  +EA ELL ++   G +  H+
Sbjct: 610 GLASEGLAKEAQELLSELCSRGALRKHL 637



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/410 (25%), Positives = 181/410 (44%), Gaps = 3/410 (0%)

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +YN ++ GY   G   +            V P   T+  ++ GLC  GR++DA     EM
Sbjct: 81  AYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEM 137

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
             K   P    Y+ +L   CRSG    +  + + + ++         N +++ +C  G +
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCV 197

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A  L   +   G   D+++Y  ++ G C         E  +EM+R    P+   + T 
Sbjct: 198 DEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I    + G     + +  +M   G  PD+  Y  ++ G+CK G LE ANE+L +M   G 
Sbjct: 258 IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGL 317

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            P+ + Y +++         +   +L + M +K      VT+ +L+      G ++    
Sbjct: 318 KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIE 377

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
              +M   G  P+VITY  +ING C+   ID+A  L   M   G  PN  +YTI++   C
Sbjct: 378 LLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLC 437

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           +AG W +A  L  +M+ +   P+  T + L+     K     A+E L+ +
Sbjct: 438 SAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQM 487


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 153/498 (30%), Positives = 241/498 (48%), Gaps = 35/498 (7%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V   M   G   D  NCN ++  + + G   +A  + R +  FG +  IV+YN +L   C
Sbjct: 168 VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLC 227

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
                 +  EL+ EM    C+PN VT+N LI    RNG  E+   ++  M       S H
Sbjct: 228 MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQM-------SEH 280

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
                                       G  P +  Y  +I G+CK G +  A      M
Sbjct: 281 ----------------------------GCTPDIRMYATIIDGICKEGHLEVANEILNRM 312

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
               + P+++ YNT+L G C +    EA  L  E+  ++     VT+N L+D  C+ G +
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLV 372

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           +   +L E M++ G +PDVITYT ++NG CK G +  A      M   G +P+  +YT  
Sbjct: 373 DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIV 432

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           + G    G   +A  L  +M+ +G PP+ +T+N L++ LCK G +E+A ELL++M+ +G 
Sbjct: 433 LKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            PD I+Y+++I    + G      +L N M+ KG+SP  + Y+ +  A +  GR+     
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQ 552

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F  ++   IR + + YNA+I+ LC+    D+A   F  M   G +PN+ TYT+LI    
Sbjct: 553 MFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLA 612

Query: 675 NAGNWQEALRLYKEMLDR 692
           + G  +EA  L  E+  R
Sbjct: 613 SEGLAKEAQELLSELCSR 630



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 199/388 (51%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           +I   + L+    +  + E+   V  +M  +G  PD++    II  +   G    A E+ 
Sbjct: 250 NIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEIL 309

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M  +G+KP++V YNT+L   C     +EA ELL EM  + C  + VT+N+L+  F +N
Sbjct: 310 NRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQN 369

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G +++   L+  ML  G      +Y  +I G+ ++GL+ EA+ L + M + G  P   +Y
Sbjct: 370 GLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSY 429

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
            I++ GLC  GR  DA     +M+++   P+ +++NTL+   C+ G + +A  L  ++  
Sbjct: 430 TIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLV 489

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
               P +++Y+T+IDGL + G  E A +L   M+N+GI P+ I Y+ +     + G ++ 
Sbjct: 490 NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNK 549

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
             + F+ +    ++ D   Y   I+   K  +T  A      M++ G  P+  TY +L+ 
Sbjct: 550 VIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIK 609

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHI 559
           GL   G  +EA ELL ++   G +  H+
Sbjct: 610 GLASEGLAKEAQELLSELCSRGALRKHL 637



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/410 (25%), Positives = 181/410 (44%), Gaps = 3/410 (0%)

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +YN ++ GY   G   +            V P   T+  ++ GLC  GR++DA     EM
Sbjct: 81  AYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEM 137

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
             K   P    Y+ +L   CRSG    +  + + + ++         N +++ +C  G +
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCV 197

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A  L   +   G   D+++Y  ++ G C         E  +EM+R    P+   + T 
Sbjct: 198 DEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I    + G     + +  +M   G  PD+  Y  ++ G+CK G LE ANE+L +M   G 
Sbjct: 258 IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGL 317

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            P+ + Y +++         +   +L + M +K      VT+ +L+      G ++    
Sbjct: 318 KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIE 377

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
              +M   G  P+VITY  +ING C+   ID+A  L   M   G  PN  +YTI++   C
Sbjct: 378 LLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLC 437

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           +AG W +A  L  +M+ +   P+  T + L+     K     A+E L+ +
Sbjct: 438 SAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQM 487


>gi|334182559|ref|NP_001184987.1| PPR repeat-containing protein [Arabidopsis thaliana]
 gi|332190929|gb|AEE29050.1| PPR repeat-containing protein [Arabidopsis thaliana]
          Length = 798

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 154/544 (28%), Positives = 280/544 (51%), Gaps = 20/544 (3%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           + D+LL + ++  MV+  L +  KM    L    ++ N ++   R+     K  +VY+ +
Sbjct: 126 VWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETD---KMWDVYKEI 182

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
            +     +  TY+T++D  C++ ++++A+  L   + +   P+ V++N +++G+ + G +
Sbjct: 183 KD----KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFV 238

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           + A+     +LK GL  S +S+N +I G    G + EAL L  +M   GV P   TYNIL
Sbjct: 239 DMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNIL 298

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
             G    G +S A     +ML K + PD+I+Y  LL G C+ GNI    +L  ++ SR  
Sbjct: 299 AKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGF 358

Query: 415 -VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
            + +++  + ++ GLC+ G ++ A  L   M   G+ PD++ Y+I+++G CK+G   MA 
Sbjct: 359 ELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMAL 418

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
             ++EM  K + P+   +   + G  + G   EA  L + +++ G   D++ YN+++ G 
Sbjct: 419 WLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGY 478

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
            K G +EEA EL + ++  G  P   T+ S+I+   +  ++   R + + +   GL+P++
Sbjct: 479 AKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSV 538

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC------------RL 641
           V+YT L+ A+A  G  +       EM+ +GI P  +TY+ +  GLC            R 
Sbjct: 539 VSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRE 598

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
           R  ++      DME EGI P++ TY  +I   C   +   A    + M  R ++    T+
Sbjct: 599 RIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATY 658

Query: 702 SALL 705
           + L+
Sbjct: 659 NILI 662



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 155/524 (29%), Positives = 263/524 (50%), Gaps = 24/524 (4%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K   V+     F  +L+ GL+P V + N +I  L   G   +A E+   M + G++P 
Sbjct: 232 YCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPD 291

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            VTYN +   F   G +  A E++ +M  +G SP+ +TY +L+ G  + G ++    L++
Sbjct: 292 SVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLK 351

Query: 303 DMLKLGLKV-SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
           DML  G ++ S    + ++ G  + G + EAL+L  +M   G++P L  Y+I+I+GLCK 
Sbjct: 352 DMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKL 411

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           G+   A   + EM  K ++P+  ++  LL G C+ G + EA  L D L S      +V Y
Sbjct: 412 GKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLY 471

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           N +IDG  + G +E A +L + +I  GI P V T+  ++ G CK  N++ AR+  + +  
Sbjct: 472 NIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKL 531

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
            GL P   +YTT +      G+T     L+ EM A+G PP  +TY+V+  GLC+    E 
Sbjct: 532 YGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHEN 591

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
            N +LR+ +                         + +    +M  +G+ P  +TY  +I 
Sbjct: 592 CNHVLRERI-----------------------FEKCKQGLRDMESEGIPPDQITYNTIIQ 628

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
                  L  AF++   M+ + +  +  TYN LI+ LC    I +A      ++E+ +  
Sbjct: 629 YLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSL 688

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +K+ YT LI  +C  G+ + A++L+ ++L R        +SA++
Sbjct: 689 SKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVI 732



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 211/412 (51%), Gaps = 30/412 (7%)

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
           + E  +++E L L+EE   R    T   +++L++   +   V D+ +   +M  +N+   
Sbjct: 100 FKELQVILEQL-LQEEGTFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVS 158

Query: 383 IISYNTLLY----------------------------GYCRSGNIGEAFLLFDELRSRNL 414
             SYN++LY                            G CR   + +A L       +++
Sbjct: 159 TQSYNSVLYHFRETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDI 218

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P+VV++N+++ G C+ G +++A+     ++  G++P V ++ I++NG C +G+++ A E
Sbjct: 219 GPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALE 278

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
             ++M + G++PD   Y     G   LG  S A+ +  +ML KG  PD+ITY +L+ G C
Sbjct: 279 LASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQC 338

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL-EMGDLRRGRDLFNNMLRKGLSPTL 593
           +LG+++    LL+ M+  GF  + I   S++ + L + G +     LFN M   GLSP L
Sbjct: 339 QLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDL 398

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
           V Y+++IH     G+ ++A   + EM  K I PN  T+ AL+ GLC+   + +A  L   
Sbjct: 399 VAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDS 458

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +   G   +   Y I+I+    +G  +EAL L+K +++  I P   T ++L+
Sbjct: 459 LISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLI 510



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 177/346 (51%), Gaps = 10/346 (2%)

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL-EVAQQLKENM 444
           ++ LL+   R   + ++  +  +++ +NL  +  +YN+++        + +V +++K+  
Sbjct: 127 WDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDK- 185

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
                  +  TY+ +V+G C+   L  A  F      K + P   ++ + ++G  KLG  
Sbjct: 186 -------NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFV 238

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
             A      +L  G  P + ++N+L++GLC +GS+ EA EL   M   G  PD +TY  +
Sbjct: 239 DMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNIL 298

Query: 565 IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
                 +G +    ++  +ML KGLSP ++TYT+L+      G +++  +   +M  +G 
Sbjct: 299 AKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGF 358

Query: 625 RPN-VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
             N +I  + +++GLC+  RID+A  LF  M+ +G+ P+   Y+I+I+  C  G +  AL
Sbjct: 359 ELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMAL 418

Query: 684 RLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLGAE 729
            LY EM D+ I P+  TH ALLL    K   + A   L+SL    E
Sbjct: 419 WLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGE 464



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/329 (25%), Positives = 151/329 (45%), Gaps = 47/329 (14%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LLL   +K M+ +   + + ++ +G   D+   N +I     +G   +A E+++++ E G
Sbjct: 439 LLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETG 498

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           I PS+ T+N+++  +CK   + EA ++L  ++  G +P+ V+Y  L+  ++  G  +   
Sbjct: 499 ITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSID 558

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L R                                   EM   G+ PT  TY+++  GL
Sbjct: 559 ELRR-----------------------------------EMKAEGIPPTNVTYSVIFKGL 583

Query: 359 CKWGRVSDARH----RFFE--------MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
           C+  +  +  H    R FE        M  + + PD I+YNT++   CR  ++  AF+  
Sbjct: 584 CRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFL 643

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
           + ++SRNL  +  TYN LID LC YG +  A     ++  Q +      YT ++   C  
Sbjct: 644 EIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVK 703

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
           G+  MA + F+++L +G       Y+  I
Sbjct: 704 GDPEMAVKLFHQLLHRGFNVSIRDYSAVI 732



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 135/286 (47%), Gaps = 14/286 (4%)

Query: 157 GILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK 216
            +LD LI  G    + I + ++++  Y K   +E+ L +F  ++  G+ P V   N +I 
Sbjct: 454 SLLDSLISSG--ETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIY 511

Query: 217 VLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSP 276
                    +AR++  ++  +G+ PS+V+Y T++D++   G  +   EL  EM+  G  P
Sbjct: 512 GYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPP 571

Query: 277 NGVTYNVLITGFSRNGE------------LEQARGLIRDMLKLGLKVSAHSYNPIICGYS 324
             VTY+V+  G  R  +             E+ +  +RDM   G+     +YN II    
Sbjct: 572 TNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLC 631

Query: 325 EKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDII 384
               L  A    E M +R +  + ATYNILI  LC +G +  A    + +  +NV     
Sbjct: 632 RVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKF 691

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
           +Y TL+  +C  G+   A  LF +L  R    ++  Y+ +I+ LCR
Sbjct: 692 AYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 165/584 (28%), Positives = 277/584 (47%), Gaps = 78/584 (13%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIK---PSIVTYNTMLD 251
           +F  M R  ++P+V   N +I  L       + R+  ++ GE  ++   P+ VT+NT++D
Sbjct: 88  LFETMKRRKVVPNVFVYNVLIGGLCKEK---RIRDAEKLFGEMSVRNLVPNRVTFNTLID 144

Query: 252 SFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKV 311
            +CK GE+  A+ L   M+     P+ +T+N L++G  +   +E+AR ++ ++   G   
Sbjct: 145 GYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVP 204

Query: 312 SAHSYNPIICGY--SEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
              +Y+ I  G   S+ G    AL+L  E + +GV     T +IL+ GLCK G+V  A  
Sbjct: 205 DGFTYSIIFDGLLKSDDGAGA-ALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEE 263

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
               ++   ++P  + YNT++ GYC+ G++  A L  +++ SR L P  + +N++ID  C
Sbjct: 264 VLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFC 323

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGS-------------------------- 463
               ++ A++  + M+ +GI P V TY I+++G                           
Sbjct: 324 EMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVI 383

Query: 464 ---------CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
                    CK G +  A     +M+ +G+ P+   Y   I G   +G   EA R  +EM
Sbjct: 384 SYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEM 443

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD- 573
              G    ++TYN L+ GLCK+G L+EA E+   +   G  PD ITY S+I      G+ 
Sbjct: 444 SKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNS 503

Query: 574 ---------------------------------LRRGRDLFNNMLRKGLSPTLVTYTVLI 600
                                            ++    LFN ML+  LSP  V Y  +I
Sbjct: 504 QKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKETLFNEMLQMNLSPDRVVYNAMI 563

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
           H +   G ++ AF    EM   G+RP+  TYN+LI G  +  ++ +   L  DM+ +G++
Sbjct: 564 HCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLI 623

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
           P   TY++LI  +C+  ++  A   Y+EML+    P+ C  + L
Sbjct: 624 PEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNEL 667



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 149/471 (31%), Positives = 244/471 (51%), Gaps = 9/471 (1%)

Query: 193 LLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDS 252
           L ++ + +  G+  D   C+ ++  L   G   KA EV + + E G+ P  V YNT+++ 
Sbjct: 227 LDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNG 286

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
           +C+ G+M  A+  + +M+ RG  PN + +N +I  F     +++A   ++ M+  G+  S
Sbjct: 287 YCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPS 346

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
             +YN +I GY    +      + EEM   G  P + +Y  LI  LCK G++ +A     
Sbjct: 347 VETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLR 406

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
           +M+ + V+P+   YN L+ G C  G + EA   FDE+    +  T+VTYN+LI GLC+ G
Sbjct: 407 DMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMG 466

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
            L+ A+++   + + G  PDVITY  +++G    GN     E +  M + GL+P    + 
Sbjct: 467 KLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFH 526

Query: 493 TQIAGELKLGDTSEAYRLQE----EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             I+G  K     E  +L+E    EML     PD + YN ++H   + G +++A  L ++
Sbjct: 527 PLISGCSK-----EGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKE 581

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           MV  G  PD+ TY S+I   L+ G L   +DL ++M  KGL P   TY++LI  H     
Sbjct: 582 MVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKD 641

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
              A++++ EM   G  PNV   N L  GL +  R+ +A  +  +M   G+
Sbjct: 642 FNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMIANGM 692



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 151/531 (28%), Positives = 275/531 (51%), Gaps = 5/531 (0%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +LL + ++  M  Q   +++ M + G LP       I++ L ++       ++++ M   
Sbjct: 1   MLLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGL 60

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G +P  + Y   + +  K G+++ A+EL   M+ R   PN   YNVLI G  +   +  A
Sbjct: 61  GFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDA 120

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L  +M    L  +  ++N +I GY + G +  A+ L E M    V P++ T+N L+ G
Sbjct: 121 EKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSG 180

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN-IGEAFLLFDELRSRNLVP 416
           LCK  R+ +AR    E+     +PD  +Y+ +  G  +S +  G A  L+ E   + +  
Sbjct: 181 LCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKI 240

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
              T + L++GLC+ G +E A+++ ++++  G++P  + Y  +VNG C++G++  A    
Sbjct: 241 DNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTI 300

Query: 477 NEMLRKGLQPDRFAYTTQIAG--ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
            +M  +GL+P+  A+ + I    E+++ D +E +   ++M+ KG  P + TYN+L+ G  
Sbjct: 301 EQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEW--VKKMVGKGIAPSVETYNILIDGYG 358

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           +L       ++L +M  +G  P+ I+Y S+I+   + G +     +  +M+ +G+ P   
Sbjct: 359 RLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNAN 418

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
            Y +LI      G+L  A  +F EM   GI   ++TYN+LI GLC++ ++ +A  +F  +
Sbjct: 419 IYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLI 478

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
              G  P+  TY  LI+   NAGN Q+ L LY+ M    ++P   T   L+
Sbjct: 479 TSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLI 529



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 139/447 (31%), Positives = 223/447 (49%), Gaps = 1/447 (0%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +LL    K+  VE+   V   ++ +GL+P     N I+      G   +A      M   
Sbjct: 247 ILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESR 306

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G++P+ + +N+++D FC+   + +A E + +M G+G +P+  TYN+LI G+ R     + 
Sbjct: 307 GLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRC 366

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             ++ +M + G K +  SY  +I    + G ++EA  +  +MV RGV P    YN+LI G
Sbjct: 367 FQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDG 426

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
            C  G++ +A   F EM +  +   I++YN+L+ G C+ G + EA  +F  + S    P 
Sbjct: 427 SCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPD 486

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           V+TYN+LI G    G+ +   +L E M   G+ P + T+  +++G  K G + +    FN
Sbjct: 487 VITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEG-IKLKETLFN 545

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           EML+  L PDR  Y   I    + G   +A+ LQ+EM+  G  PD  TYN L+ G  K G
Sbjct: 546 EMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEG 605

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            L E  +L+  M   G IP+  TY+ +I    ++ D       +  ML  G  P +    
Sbjct: 606 KLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICN 665

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGI 624
            L       GRL+ A    SEM   G+
Sbjct: 666 ELSTGLRKDGRLQEAQSICSEMIANGM 692



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 183/358 (51%), Gaps = 3/358 (0%)

Query: 162 LIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDN 221
           ++G G++   S++  ++L+  Y +  +  +C  +  +M  NG  P+V +   +I  L  +
Sbjct: 338 MVGKGIAP--SVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKD 395

Query: 222 GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY 281
           G  ++A  V R M   G+ P+   YN ++D  C  G+++EAL    EM   G     VTY
Sbjct: 396 GKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTY 455

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
           N LI G  + G+L++A  +   +   G      +YN +I GYS  G   + L L E M  
Sbjct: 456 NSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKK 515

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
            G+ PT+ T++ LI G  K G +      F EML+ N+ PD + YN +++ Y  +G++ +
Sbjct: 516 LGLKPTINTFHPLISGCSKEG-IKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQK 574

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           AF L  E+    + P   TYN+LI G  + G L   + L ++M  +G++P+  TY++++ 
Sbjct: 575 AFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQ 634

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           G C + + + A  ++ EML  G  P+         G  K G   EA  +  EM+A G 
Sbjct: 635 GHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMIANGM 692



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/373 (23%), Positives = 166/373 (44%), Gaps = 35/373 (9%)

Query: 354 LIYGLCKWGRVSDARHRFFEMLRK-NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
           ++  +C   ++       ++ +R+   +P       ++     S        LF E+   
Sbjct: 1   MLLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGL 60

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
              P  + Y   +    + GDL++A +L E M  + ++P+V  Y +++ G CK   +  A
Sbjct: 61  GFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDA 120

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
            + F EM  + L P+R  + T I G  K G+   A  L+E M  +   P +IT+N L+ G
Sbjct: 121 EKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSG 180

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           LCK   +EEA  +L ++  +GF+PD  TY+ I    L+  D                   
Sbjct: 181 LCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDD------------------- 221

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
                       A   L+L    + E   KG++ +  T + L+NGLC+  ++++A  +  
Sbjct: 222 -----------GAGAALDL----YREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLK 266

Query: 653 DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
            + E G++P +  Y  ++N  C  G+   A+   ++M  R + P+    ++++ K  +  
Sbjct: 267 SLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQ 326

Query: 713 YKVHAVEYLESLT 725
               A E+++ + 
Sbjct: 327 MIDKAEEWVKKMV 339


>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
 gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
          Length = 532

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 142/489 (29%), Positives = 250/489 (51%), Gaps = 22/489 (4%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR-GCSPNGVTYNVLITGFSRNGELEQ 296
           G++ + +++  +L + C E    +A+ ++     + GC+P+  +Y VL+ G     + E+
Sbjct: 43  GLRANAISFTPILRTLCAEKRTSDAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEE 102

Query: 297 ARGLIRDMLKLGLKVSAH--SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           A  LI  M + G     +  SY  +I G+ ++  + +A  L  EM+ RG+ P + T N +
Sbjct: 103 AVDLIHMMAEDGDHCPPNVVSYTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSI 162

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           I GLCK   +  A     +M  K+++PD  +YN+L++GY  SG + EA  +  ++     
Sbjct: 163 IDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQ 222

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P  VTY+ LID LC++G    A+++  +MI     P+V TY  +++G    G+L     
Sbjct: 223 PPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNN 282

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
             + M++ G++PD   +  QI   +K G   EA     +M  +G  PD+I+Y  ++ GLC
Sbjct: 283 LIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLC 342

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           K+G L+ A     +M+ DG  PD + +T++IH     G   +  +LF  M+ +G+ PT+V
Sbjct: 343 KIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVV 402

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
            +T +I      G++  A   F  M +  ++PNV++YNA+I+G     ++D+   L  DM
Sbjct: 403 VFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDM 462

Query: 655 EEEGILPNKYTY-------------------TILINENCNAGNWQEALRLYKEMLDREIE 695
              G+ PN  T+                     LI+  C  G  ++ L L++EML +  +
Sbjct: 463 LSVGLKPNAVTFNTLLDDMLSMGLKPDVATCNTLIDSCCEDGRIEDVLTLFREMLSKAAK 522

Query: 696 PDYCTHSAL 704
            D  T + +
Sbjct: 523 TDTVTENII 531



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 133/417 (31%), Positives = 211/417 (50%), Gaps = 16/417 (3%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K+  V +   +F +ML  G+ PDV  CN II  L       KA EV R M +  I P 
Sbjct: 131 FFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPD 190

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             TYN+++  +   G+++EA+ +L +M   G  PNGVTY++LI    + G   +AR ++ 
Sbjct: 191 CTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILN 250

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M++     +  +Y  ++ GY+ KG LVE  NL + MV  GV P    +NI IY   K G
Sbjct: 251 SMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCG 310

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R+ +A   F +M ++ ++PDIISY T++ G C+ G +  A   F ++    L P +V + 
Sbjct: 311 RLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFT 370

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            LI G   YG  E A++L   M+++GI P V+ +T M++   K G ++ A+  F+ M   
Sbjct: 371 NLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIA 430

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
            ++P+  +Y   I G    G   E  +L ++ML+ G  P+ +T+N               
Sbjct: 431 SVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNT-------------- 476

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
             LL  M+  G  PD  T  ++I +  E G +     LF  ML K      VT  ++
Sbjct: 477 --LLDDMLSMGLKPDVATCNTLIDSCCEDGRIEDVLTLFREMLSKAAKTDTVTENII 531



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 134/474 (28%), Positives = 230/474 (48%), Gaps = 3/474 (0%)

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
           G   + P+ VTY  ++   C  G +  A   L ++   G   N +++  ++         
Sbjct: 5   GSKKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRT 64

Query: 295 EQARGL-IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG--VAPTLATY 351
             A  + IR   KLG      SY  ++ G  ++    EA++L   M   G    P + +Y
Sbjct: 65  SDAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSY 124

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
             +I+G  K   V  A   F EML + + PD+++ N+++ G C+   + +A  +  ++  
Sbjct: 125 TTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFD 184

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           ++++P   TYN+L+ G    G L+ A ++ + M   G  P+ +TY+++++  CK G  + 
Sbjct: 185 KHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTE 244

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           ARE  N M++    P+   Y   + G    GD  E   L + M+  G  PD   +N+ ++
Sbjct: 245 AREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIY 304

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
              K G L+EA     KM   G +PD I+Y ++I    ++G L      F  M+  GLSP
Sbjct: 305 AYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSP 364

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
            +V +T LIH  +  G+ E A   F EM  +GIRP V+ +  +I+ L +  ++ +A  LF
Sbjct: 365 DIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLF 424

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             M    + PN  +Y  +I+    AG   E L+L  +ML   ++P+  T + LL
Sbjct: 425 DLMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLL 478



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 131/272 (48%), Gaps = 18/272 (6%)

Query: 153 VNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCN 212
           V M+ ++D+++  G+       I ++ +  Y K   +++ +L FNKM + GL+PD+ +  
Sbjct: 278 VEMNNLIDLMVQNGVRP--DHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYG 335

Query: 213 RIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR 272
            +I  L   G    A   +  M + G+ P IV +  ++  F   G+ ++A EL +EM  R
Sbjct: 336 TMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDR 395

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA 332
           G  P  V +  +I    + G++ +A+ L   M    +K +  SYN II GY   G L E 
Sbjct: 396 GIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEV 455

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
           L L ++M++ G+ P   T+N L+                 +ML   + PD+ + NTL+  
Sbjct: 456 LKLLDDMLSVGLKPNAVTFNTLLD----------------DMLSMGLKPDVATCNTLIDS 499

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            C  G I +   LF E+ S+      VT N +
Sbjct: 500 CCEDGRIEDVLTLFREMLSKAAKTDTVTENII 531



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 9/216 (4%)

Query: 516 AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLR 575
           +K   P  +TY +L+   C +G L  A   L +++  G   + I++T I+     +   +
Sbjct: 6   SKKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRT---LCAEK 62

Query: 576 RGRDLFNNMLR----KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG--IRPNVI 629
           R  D  N ++R     G +P + +YTVL+       + E A      M   G    PNV+
Sbjct: 63  RTSDAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVV 122

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           +Y  +I+G  +   + +AY LF +M + GI P+  T   +I+  C      +A  + ++M
Sbjct: 123 SYTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQM 182

Query: 690 LDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
            D+ I PD  T+++L+   L       AV  L+ ++
Sbjct: 183 FDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMS 218


>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
          Length = 897

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 150/474 (31%), Positives = 243/474 (51%), Gaps = 4/474 (0%)

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
           RM+    + P+  T+     + C+ G   EAL LL  M   GC P+ V Y  +I      
Sbjct: 148 RMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQ 207

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G + +A  L+ +ML +G     ++++ ++ G    G + EA  L + M+T+G  P + TY
Sbjct: 208 GGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTY 267

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
             L+ GLC+  +  +AR     ML +    +++ +NT++ G    G + EA  L++ +  
Sbjct: 268 GFLLQGLCRVRQADEAR----AMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGL 323

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           +   P   TY+ L+ GLC+ G +  A +L   M  +G  P+V+TYTI+++  CK G    
Sbjct: 324 KGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDD 383

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
            R    EM  KGL  +   Y   I    K G   EA  L +EM ++G  PD+ +YN +++
Sbjct: 384 TRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIY 443

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
            LC    +EEA  +   ++ +G + + ITY +IIHA L  G  +    L   M+  G S 
Sbjct: 444 HLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSL 503

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
            +V+Y  LI A    G ++ + +   EM  KGI+PN ++YN LI+ LC+ RR+  A  L 
Sbjct: 504 DVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELS 563

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             M  +G+ P+  TY  LIN  C  G    AL L +++ +  + PD  T++ L+
Sbjct: 564 KQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILI 617



 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 138/487 (28%), Positives = 249/487 (51%), Gaps = 7/487 (1%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
            ++ L +   M R+G +PD      +I  L D G   +A  +   M   G    + T++ 
Sbjct: 175 ADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDD 234

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++   C  G ++EA  L+  M  +GC P  +TY  L+ G  R  + ++AR ++  + +L 
Sbjct: 235 VVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELN 294

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           + +    +N +I G   +G L EA  L E M  +G  P   TY+IL++GLCK GR+  A 
Sbjct: 295 VVL----FNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAV 350

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               EM +K   P++++Y  +L+ +C++G   +   L +E+ ++ L      YN +I  L
Sbjct: 351 RLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYAL 410

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G ++ A  L + M +QG  PD+ +Y  ++   C    +  A   F  +L +G+  + 
Sbjct: 411 CKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANG 470

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             Y T I   L+ G   +A RL +EM+  G   D+++YN L+  +CK G+++ +  LL +
Sbjct: 471 ITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEE 530

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M   G  P++++Y  +I    +   +R   +L   ML +GL+P +VTY  LI+     G 
Sbjct: 531 MAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGW 590

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP--NKYTY 666
           +  A     ++  + + P++ITYN LI+  C++R +D A  + ++     + P  ++   
Sbjct: 591 MHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDA-AMLLNRAMAAVCPVGDRRIM 649

Query: 667 TILINEN 673
            IL ++N
Sbjct: 650 QILPDKN 656



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 144/449 (32%), Positives = 226/449 (50%), Gaps = 4/449 (0%)

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           P   T+ V      R G  ++A  L+R M + G    A  Y  +I    ++G + EA  L
Sbjct: 157 PTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATL 216

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
             EM+  G A  + T++ ++ G+C  GRV +A      M+ K  +P +++Y  LL G CR
Sbjct: 217 LNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCR 276

Query: 396 SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
                EA  +   +   N    VV +NT+I G    G L  A +L E M  +G  PD  T
Sbjct: 277 VRQADEARAMLGRVPELN----VVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHT 332

Query: 456 YTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML 515
           Y+I+++G CK+G +  A     EM +KG  P+   YT  +    K G   +   L EEM 
Sbjct: 333 YSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMS 392

Query: 516 AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLR 575
           AKG   +   YN +++ LCK G ++EA  L+++M   G  PD  +Y +II+       + 
Sbjct: 393 AKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQME 452

Query: 576 RGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALI 635
               +F N+L +G+    +TY  +IHA    GR + A     EM + G   +V++YN LI
Sbjct: 453 EAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLI 512

Query: 636 NGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIE 695
             +C+   +D++  L  +M E+GI PN  +Y ILI+E C     ++AL L K+ML++ + 
Sbjct: 513 KAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLA 572

Query: 696 PDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           PD  T++ L+       +   A+  LE L
Sbjct: 573 PDIVTYNTLINGLCKMGWMHAALNLLEKL 601



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 161/316 (50%), Gaps = 1/316 (0%)

Query: 166 GLSSC-VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS 224
           GL  C        +L+    K   +   + +  +M + G  P+V     ++     NG  
Sbjct: 322 GLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMW 381

Query: 225 VKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVL 284
              R +   M   G+  +   YN M+ + CK+G M EA+ L+ EM+ +GC+P+  +YN +
Sbjct: 382 DDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTI 441

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           I     N ++E+A  +  ++L+ G+  +  +YN II      G   +A+ L +EM+  G 
Sbjct: 442 IYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGC 501

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
           +  + +YN LI  +CK G V  +     EM  K + P+ +SYN L+   C+   + +A  
Sbjct: 502 SLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALE 561

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
           L  ++ ++ L P +VTYNTLI+GLC+ G +  A  L E + N+ + PD+ITY I+++  C
Sbjct: 562 LSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHC 621

Query: 465 KMGNLSMAREFFNEML 480
           K+  L  A    N  +
Sbjct: 622 KVRLLDDAAMLLNRAM 637



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 16/169 (9%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGI-LDVLIGGGLSSCVSIKILD 177
           GV  +   + TI+  L+  G  + A  + + ++   +HG  LDV+   GL     IK + 
Sbjct: 465 GVVANGITYNTIIHALLRDGRWQDAVRLAKEMI---LHGCSLDVVSYNGL-----IKAM- 515

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
                  K   V++ L++  +M   G+ P+  + N +I  L        A E+ + M   
Sbjct: 516 ------CKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQ 569

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           G+ P IVTYNT+++  CK G M  AL LL ++      P+ +TYN+LI+
Sbjct: 570 GLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILIS 618


>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Glycine max]
          Length = 664

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 172/619 (27%), Positives = 304/619 (49%), Gaps = 27/619 (4%)

Query: 95  RVLNRIREKPRI--ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVC 152
            V + +R +P +  AL+ F+++      K     +  ++E L  +  L + ++++  +  
Sbjct: 42  HVAHALRREPNVLYALQHFQYLTNTLAFKHTPLTYHVMIEKLGRNSELDALHYILHQMKI 101

Query: 153 VNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCN 212
             +    D  I      CV        L  Y    + ++ L +F ++   G  P VK  N
Sbjct: 102 ERIPCSQDSFI------CV--------LNSYKNSGLGDRALKMFYRIKEFGCKPTVKIYN 147

Query: 213 RIIKVL---RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM 269
            ++  L     N F +       M GE G++P++ TYN +L + CK G++  A +LL EM
Sbjct: 148 HLLDALLGESGNKFHMIGAVYENMRGE-GMEPNVFTYNVLLKALCKNGKLDGACKLLVEM 206

Query: 270 QGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLL 329
             RGC P+GV+Y  ++     +G +E+AR + R   + G +      N +ICG   +G +
Sbjct: 207 SKRGCVPDGVSYTTVVAAMCEDGRVEEAREVAR---RFGAEGVVSVCNALICGLCREGRV 263

Query: 330 VEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTL 389
            E   L +EMV  GV P + +Y+ +I  L   G V  A     +M+R+   P++ ++++L
Sbjct: 264 GEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSL 323

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
           + GY   G +GE   L+  +    + P VV YNTL++GLC  G+L  A  +   M     
Sbjct: 324 MKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCF 383

Query: 450 L-PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
             P+V TY+ +V+G  K G+L  A E +N+M+  G++P+   YT+ +    K     +AY
Sbjct: 384 CRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAY 443

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
           RL + M   G PP ++T+N  + GLC  G +  A  ++ +M   G +PD  TY  ++   
Sbjct: 444 RLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGL 503

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
             + +L+   +L   +  + +   LVTY  +++  ++ G+ E        M V G++P+ 
Sbjct: 504 FSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDA 563

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEG--ILPNKYTYTILINENCNAGNWQEALRLY 686
           IT N +I    +L ++  A   F+D    G  + P+   +T L+   CN+   +EA+   
Sbjct: 564 ITVNVVIYAYSKLGKVRTAIQ-FLDRITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYL 622

Query: 687 KEMLDREIEPDYCTHSALL 705
            +ML++ I P+  T   L+
Sbjct: 623 NKMLNKGIFPNIATWDVLV 641



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/464 (27%), Positives = 240/464 (51%), Gaps = 5/464 (1%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           ++LL    K   ++    +  +M + G +PD  +   ++  + ++G   +AREV R  G 
Sbjct: 184 NVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAREVARRFGA 243

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G+   +   N ++   C+EG + E   L+ EM G G  PN V+Y+ +I+  S  GE+E 
Sbjct: 244 EGV---VSVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVEL 300

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  ++  M++ G + + H+++ ++ GY   G + E + L   MV  GV P +  YN L+ 
Sbjct: 301 ALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLN 360

Query: 357 GLCKWGRVSDARHRFFEMLRKNVI-PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
           GLC  G +++A      M +     P++ +Y+TL++G+ ++G++  A  +++++ +  + 
Sbjct: 361 GLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVR 420

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P VV Y +++D LC+    + A +L +NM   G  P V+T+   + G C  G +  A   
Sbjct: 421 PNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRV 480

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
            ++M R G  PD   Y   + G   + +  EA  L  E+  +    +L+TYN +++G   
Sbjct: 481 VDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSS 540

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR-KGLSPTLV 594
            G  E   ++L +M+ +G  PD IT   +I+A  ++G +R      + +   K L P ++
Sbjct: 541 HGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFLDRITAGKELCPDII 600

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
            +T L+        +E A +Y ++M  KGI PN+ T++ L+ G 
Sbjct: 601 AHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVLVRGF 644



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 199/398 (50%), Gaps = 8/398 (2%)

Query: 157 GILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK 216
           G++D ++G G+    ++     ++   +    VE  L V  KM+R G  P+V   + ++K
Sbjct: 268 GLMDEMVGNGVDP--NVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMK 325

Query: 217 VLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG-CS 275
                G   +   ++R+M   G++P++V YNT+L+  C  G + EA+++   M+    C 
Sbjct: 326 GYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCR 385

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           PN  TY+ L+ GF + G+L+ A  +   M+  G++ +   Y  ++    +  +  +A  L
Sbjct: 386 PNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRL 445

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
            + M T G  PT+ T+N  I GLC  GRV  A     +M R   +PD  +YN LL G   
Sbjct: 446 IDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFS 505

Query: 396 SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
              + EA  L  EL  R +   +VTYNT++ G   +G  E   Q+   M+  G+ PD IT
Sbjct: 506 VNELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAIT 565

Query: 456 YTIMVNGSCKMGNLSMAREFFNEMLR-KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
             +++    K+G +  A +F + +   K L PD  A+T+ + G        EA     +M
Sbjct: 566 VNVVIYAYSKLGKVRTAIQFLDRITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKM 625

Query: 515 LAKGFPPDLITYNVLVHGLCK----LGSLEEANELLRK 548
           L KG  P++ T++VLV G  K    +G +   +++L K
Sbjct: 626 LNKGIFPNIATWDVLVRGFFKKLGHMGPIRILDDILGK 663


>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 755

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 157/531 (29%), Positives = 254/531 (47%), Gaps = 11/531 (2%)

Query: 182 IYTKKSMVEQC---------LLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR 232
           ++   S +E C         + +  +M    ++PD  + N  IK     G   +   + R
Sbjct: 180 VFCYNSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERVIGLLR 239

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
            M   G+ P  +TYN+++    KEG+ +EAL +L EM  +G +P  ++YN+ I    R+G
Sbjct: 240 EMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSG 299

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
             ++A  ++R M   G+     SY+  I      G    +++L +EM  RGVAP    +N
Sbjct: 300 RWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFN 359

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
             I    K G+   A     E+    + PD  S+N+ +    +SG   EA  L  E+ ++
Sbjct: 360 SAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAK 419

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
            L P  ++YN+ I+   + G  E+A +L+  M  +G+ P+VI+  I +    + G     
Sbjct: 420 RLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEG 479

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
            E   +M  +GL P+   Y + I    K G   +A  L  +M      PD ITYN  +  
Sbjct: 480 LELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAA 539

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
             K G  +EA  LLR+M G G  PD I+YT+ I A  + G   R  +L   M  KGL+P 
Sbjct: 540 CSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPN 599

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
           ++TY  +I A    G  E A     E++   + P++++YN  I+   +  R ++A  L  
Sbjct: 600 VITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLR 659

Query: 653 DMEEEGILPNKYTYTILINENCNA-GNWQEALRLYKEMLDREIEPDYCTHS 702
           +M  EG+ P+  +YT  I   CNA G W++AL L   M    + P   ++S
Sbjct: 660 EMPAEGLTPDVISYTSAIRA-CNAEGEWEKALGLLNLMGAHGVSPTATSYS 709



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 153/509 (30%), Positives = 247/509 (48%), Gaps = 4/509 (0%)

Query: 191 QCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF-GIKPSIVTYNTM 249
           + L + ++M   G++        I    R   +  KA E+ R + E  G+ P++  YN+ 
Sbjct: 128 EALGILDEMKEGGVVCAHSYTTAITTCGRQGQWE-KALELLREIPEQEGVSPNVFCYNSA 186

Query: 250 LDSFCKEGEMQE-ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++ C  G+  E A+ LL EM  R   P+ ++YN  I    R G+ E+  GL+R+M  +G
Sbjct: 187 IEA-CGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERVIGLLREMPSVG 245

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           L   A +YN +I G  ++G   EAL++  EM  +G+ P   +YN+ I    + GR  +A 
Sbjct: 246 LTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAV 305

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               +M  + V PD+ISY+  +      G    +  L DE+  R + P  + +N+ I   
Sbjct: 306 EVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVAC 365

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
            + G  E A +L   +   G+ PD  ++   +    K G    A E   EM  K L+PD 
Sbjct: 366 GKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDA 425

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
            +Y + I    K G    A  L+ +M  KG  P++I+ N+ +    + G  +E  ELLR+
Sbjct: 426 ISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQ 485

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M   G  P+ ITY S I    + G   +  DL   M    ++P  +TY   I A + RGR
Sbjct: 486 MPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGR 545

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
            + A     EM  +G+ P+VI+Y A I+   +  + ++A  L   M  +G+ PN  TY  
Sbjct: 546 WKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNS 605

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPD 697
           +I      G W++AL L KE+ +  + PD
Sbjct: 606 VIKACGRGGEWEKALDLLKELKETAVAPD 634



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 141/486 (29%), Positives = 229/486 (47%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K+   ++ L V  +M   GL P+  + N  I+    +G   +A EV R M   G+ P ++
Sbjct: 262 KEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVI 321

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           +Y+  + +    G+ + +++LL EM GRG +PN + +N  I    + G+ E+A  L+R++
Sbjct: 322 SYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREV 381

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
             LGL   A S+N  I   ++ G   EAL L +EM  + + P   +YN  I    K G+ 
Sbjct: 382 TALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQW 441

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
             A     +M  K + P++IS N  +      G   E   L  ++ ++ L P V+TYN+ 
Sbjct: 442 EMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSA 501

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           I    + G  E A  L   M    + PD ITY   +    K G    A     EM  +GL
Sbjct: 502 IKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGL 561

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            PD  +YT  I    K G    A  L  +M  KG  P++ITYN ++    + G  E+A +
Sbjct: 562 TPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALD 621

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           LL+++      PD ++Y   I A  + G      DL   M  +GL+P +++YT  I A  
Sbjct: 622 LLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRACN 681

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
           A G  E A    + M   G+ P   +Y+  I    +  R ++A  L  +M + G+     
Sbjct: 682 AEGEWEKALGLLNLMGAHGVSPTATSYSLAIEACGKGGRREEAVCLVREMAQRGLSHRNI 741

Query: 665 TYTILI 670
           + ++++
Sbjct: 742 SNSLIV 747



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 132/470 (28%), Positives = 208/470 (44%), Gaps = 37/470 (7%)

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPII--CGYS---EKGL----------------- 328
            G+  +A G++ D +K G  V AHSY   I  CG     EK L                 
Sbjct: 123 TGKWREALGIL-DEMKEGGVVCAHSYTTAITTCGRQGQWEKALELLREIPEQEGVSPNVF 181

Query: 329 ----LVE----------ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
                +E          A++L  EM  R V P   +YN  I    + G+         EM
Sbjct: 182 CYNSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERVIGLLREM 241

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
               + PD I+YN+++ G  + G   EA  +  E+ ++ L P  ++YN  I    R G  
Sbjct: 242 PSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRW 301

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A ++   M +QG+ PDVI+Y   +      G    + +  +EM  +G+ P+   + + 
Sbjct: 302 KEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSA 361

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I    K G   +A  L  E+ A G  PD  ++N  +    K G  +EA ELL++M     
Sbjct: 362 IVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRL 421

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            PD I+Y S I A  + G      +L   M  KGL+P +++  + I A   RGR +    
Sbjct: 422 KPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLE 481

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
              +M  +G+ PNVITYN+ I    +  + ++A  L   M+E  + P+  TY   I    
Sbjct: 482 LLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACS 541

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
             G W+EA+ L +EM  + + PD  +++A +           AVE L  +
Sbjct: 542 KRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQM 591



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 164/350 (46%)

Query: 184 TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
           TK    ++ L +  +M    L PD  + N  I+     G    A E+ R M   G+ P++
Sbjct: 401 TKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNV 460

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           ++ N  + +  + G  QE LELL +M  +G +PN +TYN  I    + G+ E+A  L+  
Sbjct: 461 ISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAK 520

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M +L +   + +YN  I   S++G   EA+ L  EM  +G+ P + +Y   I    K G+
Sbjct: 521 MKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQ 580

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
              A     +M  K + P++I+YN+++    R G   +A  L  EL+   + P +++YN 
Sbjct: 581 WERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNL 640

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
            I    + G  E A  L   M  +G+ PDVI+YT  +      G    A    N M   G
Sbjct: 641 AISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHG 700

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
           + P   +Y+  I    K G   EA  L  EM  +G     I+ +++V  L
Sbjct: 701 VSPTATSYSLAIEACGKGGRREEAVCLVREMAQRGLSHRNISNSLIVEAL 750



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 83/163 (50%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K    E+ + +  +M   GL P+V   N +IK     G   KA ++ + + E  + P 
Sbjct: 575 YGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPD 634

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +++YN  + +  K G  +EAL+LL EM   G +P+ ++Y   I   +  GE E+A GL+ 
Sbjct: 635 LMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLN 694

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            M   G+  +A SY+  I    + G   EA+ L  EM  RG++
Sbjct: 695 LMGAHGVSPTATSYSLAIEACGKGGRREEAVCLVREMAQRGLS 737


>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
 gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
          Length = 894

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 174/576 (30%), Positives = 273/576 (47%), Gaps = 52/576 (9%)

Query: 202 NGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT--MLDSFCKEGEM 259
           +G LPD  +CNR++++L D      AR +Y  M     +     Y+T  M+   C EG +
Sbjct: 233 HGALPDAPHCNRLLRLLVDRRRWECARRLYGEMLARDREGGADDYSTCVMVRGLCLEGRV 292

Query: 260 QEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI 319
           +E   L+    G GC P  V YNVLI G+ R G++ +   L+ +M   G+  +  +Y  I
Sbjct: 293 EEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAI 352

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           I     K  L +  +L  EM  RG++P +  YN +IY LCK    S A     +M+    
Sbjct: 353 IHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRF 412

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
            PD++++NTL+  +CR G++ EA  L  E   R L P  ++Y  LI G C  G++ VA  
Sbjct: 413 DPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASD 472

Query: 440 LKENMINQGILPDVIT-----------------------------------YTIMVNGSC 464
           L   MI +G  PDV+T                                   Y ++++G C
Sbjct: 473 LLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLC 532

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
           K   LS A+    EML + +QPD+F YTT I G ++    S+A ++ E M  KG   D++
Sbjct: 533 KKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIV 592

Query: 525 TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM 584
            YN ++ G CK G + EA   +  M   G IPD  TYT++I    + GD++       +M
Sbjct: 593 AYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDM 652

Query: 585 LRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRI 644
           +++   P +VTY  LI  +   G  + A + F+ MQ +G+ PNV+ Y  LI  L +  + 
Sbjct: 653 MKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKA 712

Query: 645 DQAYGLFIDMEEEGILPNKYTYTILIN--ENC-------NAGNWQEA------LRLYKEM 689
            QA   F  M      PN  T   L+N   NC       N  +  +A      L ++K +
Sbjct: 713 IQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGL 772

Query: 690 LDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
           +   ++P    ++A++      +    A+E  E ++
Sbjct: 773 ISDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKMS 808



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 157/529 (29%), Positives = 253/529 (47%), Gaps = 26/529 (4%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           ++L+  Y ++  V + LL+  +M   G++P V     II  L       K   +   M E
Sbjct: 315 NVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKE 374

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G+ P++  YNT++ + CK     +AL +L +M      P+ VT+N LI  F R G++E+
Sbjct: 375 RGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEE 434

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  L+R+ ++  L+ +  SY P+I G+  +G ++ A +L  EM+ RG  P + T   LI+
Sbjct: 435 ALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIH 494

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           GL   G+V +A     +M  + V+PD   YN L+ G C+   +  A  L  E+  + + P
Sbjct: 495 GLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQP 554

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
               Y TLIDG  R   L  A+++ E M  +G   D++ Y  M+ G CK G ++ A    
Sbjct: 555 DKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCM 614

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           + M + G  PD F YTT I G  K GD   A R   +M+ +   P+++TY  L+ G C +
Sbjct: 615 SSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNI 674

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G+ + A  L   M  +G  P+ + YT +I +  +     +    F +ML    SP   T 
Sbjct: 675 GNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATM 734

Query: 597 TVLI-------------------HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
             L+                    AH     L++    F  +   G+ P +  YNA+I  
Sbjct: 735 HYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDV----FKGLISDGLDPRISAYNAIIFS 790

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI---NENCNAGNWQEAL 683
           LCR   + +A  L   M  +G LP+  T+  L+   +    +G W+ AL
Sbjct: 791 LCRHNMLGKAMELKEKMSNKGCLPDPVTFLSLLYGFSSVGKSGKWRSAL 839



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 136/444 (30%), Positives = 211/444 (47%)

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
           V++ G    G +E+ R LI      G    A  YN +I GY  +G +   L L  EM  +
Sbjct: 281 VMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMK 340

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           G+ PT+ TY  +I+ L +   ++      +EM  + + P++  YNT++Y  C+  +  +A
Sbjct: 341 GIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQA 400

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
             + +++ +    P VVT+NTLI   CR GD+E A +L    I + + P+ ++YT +++G
Sbjct: 401 LAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHG 460

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            C  G + +A +   EM+ +G  PD       I G +  G   EA  ++E+M  +   PD
Sbjct: 461 FCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPD 520

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
              YNVL+ GLCK   L  A  LL +M+     PD   YT++I   +    L   R +F 
Sbjct: 521 ANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFE 580

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
            M  KG    +V Y  +I  +   G +  A M  S M+  G  P+  TY  LI+G  +  
Sbjct: 581 FMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKG 640

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
            I  A     DM +    PN  TY  LI   CN GN   A  L+  M    + P+   ++
Sbjct: 641 DIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYT 700

Query: 703 ALLLKQLDKDYKVHAVEYLESLTL 726
            L+     KD  + A  Y E + L
Sbjct: 701 VLIGSLFKKDKAIQAAAYFEHMLL 724



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 136/458 (29%), Positives = 225/458 (49%), Gaps = 17/458 (3%)

Query: 166 GLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSV 225
           GLS   +++I + ++    K     Q L V N+M+ +   PDV   N +I      G   
Sbjct: 376 GLSP--NVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVE 433

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           +A ++ R      ++P+ ++Y  ++  FC  GE+  A +LL EM GRG +P+ VT   LI
Sbjct: 434 EALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALI 493

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            G   +G++++A  +   M +  +   A+ YN +I G  +K +L  A NL  EM+ + V 
Sbjct: 494 HGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQ 553

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P    Y  LI G  +  ++SDAR  F  M  K    DI++YN ++ GYC+SG + EA + 
Sbjct: 554 PDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMC 613

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
              +R    +P   TY TLIDG  + GD++ A +   +M+ +   P+++TY  ++ G C 
Sbjct: 614 MSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCN 673

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
           +GN   A   F  M  +GL P+   YT  I    K     +A    E ML     P+  T
Sbjct: 674 IGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDAT 733

Query: 526 YNVLVHGL--CKLGSL-------EEAN------ELLRKMVGDGFIPDHITYTSIIHASLE 570
            + LV+GL  C+ G +       ++A+      ++ + ++ DG  P    Y +II +   
Sbjct: 734 MHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRISAYNAIIFSLCR 793

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
              L +  +L   M  KG  P  VT+  L++  ++ G+
Sbjct: 794 HNMLGKAMELKEKMSNKGCLPDPVTFLSLLYGFSSVGK 831


>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Cucumis sativus]
          Length = 728

 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 144/433 (33%), Positives = 225/433 (51%), Gaps = 5/433 (1%)

Query: 268 EMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKG 327
           EM  RG  P+  TY  +I G+ RNG + +A   I +M++ G  V   +   II  + EK 
Sbjct: 234 EMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKS 293

Query: 328 LLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYN 387
           L+  A+    ++   G++P L  Y+ +I GLCK G V  A     EM++    P++ ++ 
Sbjct: 294 LVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHT 353

Query: 388 TLLYGYCRSGNIGEAFLLFDEL-RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMIN 446
           +L++G C+ G    AF LF +L RS N  P V TY  +I G C+   L  A+ L E M  
Sbjct: 354 SLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKE 413

Query: 447 QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSE 506
           QG++P+  TYT +++G CK GN S A E    M  +G  P+   Y + + G  K G   E
Sbjct: 414 QGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEE 473

Query: 507 AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
           A++L           D +TY +L+   CK   + +A   L KM   GF PD   YT++I 
Sbjct: 474 AFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIA 533

Query: 567 ASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRP 626
           A      ++    LF+ +++ GL+PT  TYT +I  +    ++ LA  +F +M   G  P
Sbjct: 534 AFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAP 593

Query: 627 NVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL--- 683
           + I+Y ALI+GLC+  R+D+A  L+  M ++G+ P + T   L  E C   ++  A+   
Sbjct: 594 DSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVIL 653

Query: 684 -RLYKEMLDREIE 695
            RL K++  R + 
Sbjct: 654 ERLNKKLWIRTVH 666



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 150/489 (30%), Positives = 246/489 (50%), Gaps = 16/489 (3%)

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           M+  F + G+++EA++++ +M+ +G        N +I   +    +E A  +  +M   G
Sbjct: 180 MVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARG 239

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           +   + +Y  II GY   G ++EA     EM+ RG     AT  ++I   C+   V+ A 
Sbjct: 240 VYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAV 299

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F ++ +  + P++I+Y++++ G C+ G++ +AF L +E+      P V T+ +LI GL
Sbjct: 300 WFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGL 359

Query: 429 CRYGDLEVAQQLKENMI-NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           C+ G  E A +L   +I +    P+V TYT M++G CK   LS A   F  M  +GL P+
Sbjct: 360 CKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPN 419

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              YTT I G  K G+ S+AY L E M  +GF P+  TYN +V GLCK G  EEA +LL 
Sbjct: 420 TNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLN 479

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
               +    D +TYT +I    +  D+ +     N M + G  P +  YT LI A   + 
Sbjct: 480 TGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQN 539

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
            ++ +   F E+   G+ P   TY ++I G CR +++  A   F  M + G  P+  +Y 
Sbjct: 540 MMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYG 599

Query: 668 ILINENCNAGNWQEALRLYKEMLDREIEP----------DYC-----THSALLLKQLDKD 712
            LI+  C      EA +LY  M+D+ + P          +YC       + ++L++L+K 
Sbjct: 600 ALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNKK 659

Query: 713 YKVHAVEYL 721
             +  V  L
Sbjct: 660 LWIRTVHTL 668



 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 166/606 (27%), Positives = 271/606 (44%), Gaps = 37/606 (6%)

Query: 102 EKPRIALRFFRWVETQPGVK--RDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGIL 159
           E   +AL FF W    P  +     ++ CT+   L+    L  A+ VVE +V     G+ 
Sbjct: 132 EGSMVALSFFYWAVGFPKFRYFMRLYIVCTM--SLVGKCNLERAHEVVECMV-----GVF 184

Query: 160 DVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLR 219
             +  G L   V + ILD                     M   GL+   +  NRII V  
Sbjct: 185 AEI--GKLKEAVDM-ILD---------------------MRNQGLVLTTRVMNRIILVAA 220

Query: 220 DNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGV 279
           +      A  V+  M   G+ P   TY  ++  +C+ G + EA   + EM  RG   +  
Sbjct: 221 EMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNA 280

Query: 280 TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
           T  ++IT F     + +A      + K+GL  +  +Y+ +I G  ++G + +A  L EEM
Sbjct: 281 TLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEM 340

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK-NVIPDIISYNTLLYGYCRSGN 398
           V  G  P + T+  LI+GLCK G    A   F +++R  N  P++ +Y  ++ GYC+   
Sbjct: 341 VKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEK 400

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           +  A +LF+ ++ + LVP   TY TLIDG C+ G+   A +L E M N+G  P+  TY  
Sbjct: 401 LSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNS 460

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           +V+G CK G    A +  N   +  ++ D   YT  I+ + K  D ++A     +M   G
Sbjct: 461 IVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVG 520

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
           F PD+  Y  L+   C+   ++++ +L  +++  G  P   TYTS+I        +    
Sbjct: 521 FQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAV 580

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
             F  M   G +P  ++Y  LI       RL+ A   +  M  KG+ P  +T   L    
Sbjct: 581 KFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEY 640

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
           C+      A  +   + ++  +   +T   LI + C       A   + ++LD+E+  D 
Sbjct: 641 CKTEDFASAMVILERLNKKLWIRTVHT---LIRKLCCEKKVALAALFFHKLLDKEVNVDR 697

Query: 699 CTHSAL 704
            T +A 
Sbjct: 698 VTLAAF 703



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 179/387 (46%), Gaps = 4/387 (1%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMGEFGIKPSI 243
           K+  V+Q   +  +M++NG  P+V     +I  L   G++ +A  ++ +++     KP++
Sbjct: 326 KRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNV 385

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
            TY  M+  +CKE ++  A  L   M+ +G  PN  TY  LI G  + G   +A  L+  
Sbjct: 386 HTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMEL 445

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M   G   +  +YN I+ G  ++G   EA  L        +     TY ILI   CK   
Sbjct: 446 MSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRAD 505

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           ++ A     +M +    PDI  Y TL+  +CR   + ++  LFDE+    L PT  TY +
Sbjct: 506 MNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTS 565

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           +I G CR   + +A +  + M + G  PD I+Y  +++G CK   L  AR+ ++ M+ KG
Sbjct: 566 MICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKG 625

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           L P      T      K  D + A  + E +  K +   + T + L+  LC    +  A 
Sbjct: 626 LSPCEVTRVTLTYEYCKTEDFASAMVILERLNKKLW---IRTVHTLIRKLCCEKKVALAA 682

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLE 570
               K++      D +T  +   A +E
Sbjct: 683 LFFHKLLDKEVNVDRVTLAAFNTACIE 709



 Score = 43.5 bits (101), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 57/127 (44%)

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           ++   A  G+L+ A     +M+ +G+       N +I     +R ++ A  +F +M   G
Sbjct: 180 MVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARG 239

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAV 718
           + P+  TY  +I   C  GN  EA R   EM++R    D  T + ++    +K     AV
Sbjct: 240 VYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAV 299

Query: 719 EYLESLT 725
            +   +T
Sbjct: 300 WFFHKVT 306


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 161/522 (30%), Positives = 255/522 (48%), Gaps = 24/522 (4%)

Query: 207 DVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELL 266
           D   C  +I  L +  +  +A      M      P++VTY T+L  F K+ ++     ++
Sbjct: 106 DTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRII 165

Query: 267 WEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII---CGY 323
             M   GC+PN   +N L+  +    +   A  L+  M   G       YN  I   CG 
Sbjct: 166 NMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICG- 224

Query: 324 SEKGLLVEALNLEEEMVTRGVAP--TLATYNILIYG--LCKWGRVSDARHRFFEMLRKNV 379
            EK    + L+L E++    +A    L   N+  +   LC  G+   A     EM+RK  
Sbjct: 225 QEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGF 284

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
           +PD  +Y+ ++   C +  + +AFLLF E++   + P V TY  LID  C+ G +E AQ 
Sbjct: 285 VPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQW 344

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           L E M + G  P V+TYT +++   K   +  A + F+ M+  G +P+   Y   + G  
Sbjct: 345 LFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLC 404

Query: 500 KLGDTSEAYRLQEEMLAKG--------FP--------PDLITYNVLVHGLCKLGSLEEAN 543
           K G+ S+A+ +  +++           FP        P+++TY  LV GLCK   ++ A+
Sbjct: 405 KAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAH 464

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
           ELL  M+  G  P+HI Y ++I    + G +   +++F  M + G  P++ TYT LI   
Sbjct: 465 ELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRM 524

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
              GRL+LA    S+M      PNV+TY A+I+GLCR+   ++A  L   MEE+G  PN 
Sbjct: 525 FKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNV 584

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            TYT LI+    AG    +L L+ +M  +   P+Y T+  L+
Sbjct: 585 VTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLI 626



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 174/638 (27%), Positives = 291/638 (45%), Gaps = 70/638 (10%)

Query: 112 RWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCV 171
           RW +    ++R++F   T+L   + SGL+ ++Y+         M            +SC+
Sbjct: 90  RWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMR----------CNSCI 139

Query: 172 -SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV 230
            ++     LL  + KK  +  C  + N M+  G  P+    N ++    +      A ++
Sbjct: 140 PNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKL 199

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKE---------------------------------- 256
              M   G  P  V YN  + S C +                                  
Sbjct: 200 LNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANF 259

Query: 257 -------GEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
                  G+  +A +L+ EM  +G  P+  TY+ +IT      ++E+A  L ++M  +G+
Sbjct: 260 ARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGV 319

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
               ++Y  +I  + + GL+ +A  L EEM + G +PT+ TY  LI+   K  +V  A  
Sbjct: 320 TPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQAND 379

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL----------------RSRN 413
            F  M+     P+ ++Y  L+ G C++GNI +AF ++ +L                    
Sbjct: 380 IFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHT 439

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           L P VVTY  L+DGLC+   ++ A +L + M++ G  P+ I Y  +++G CK G +  A+
Sbjct: 440 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQ 499

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
           E F +M + G  P    YT+ I    K G    A ++  +ML     P+++TY  ++ GL
Sbjct: 500 EVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGL 559

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
           C++G  E+A +LL  M   G  P+ +TYT++I    + G +    DLF  M RKG SP  
Sbjct: 560 CRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNY 619

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
           VTY VLI+   A G L+ A +   EM+       +  Y   I G    +    + G+  +
Sbjct: 620 VTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFS--KSFIASLGILEE 677

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           ME  G +P    Y +LI+    AG  + A+ L+KEM++
Sbjct: 678 MESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME 715



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 146/515 (28%), Positives = 247/515 (47%), Gaps = 22/515 (4%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           ++   +  +M+R G +PD    +++I  L       KA  +++ M   G+ P + TY  +
Sbjct: 270 DKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTIL 329

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           +DSFCK G +++A  L  EM+  GCSP  VTY  LI  + +  ++ QA  +   M+  G 
Sbjct: 330 IDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGC 389

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG----------------VAPTLATYNI 353
           + +  +Y  ++ G  + G + +A  +  +++                   +AP + TY  
Sbjct: 390 RPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGA 449

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           L+ GLCK  +V  A      ML     P+ I Y+ L+ G+C++G I  A  +F ++    
Sbjct: 450 LVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCG 509

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
            +P+V TY +LID + + G L++A ++   M+     P+V+TYT M++G C++G    A 
Sbjct: 510 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKAL 569

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
           +  + M  KG  P+   YT  I G  K G    +  L  +M  KG  P+ +TY VL++ L
Sbjct: 570 KLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHL 629

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHIT-YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           C  G L++A  LL +M    + P ++  Y   I    +      G  +   M   G  P 
Sbjct: 630 CAAGLLDKARLLLGEM-KQTYWPKYLQGYRCAIQGFSKSFIASLG--ILEEMESYGTVPI 686

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQ--VKGIRPNVITYNALINGLCRLRRIDQAYGL 650
              Y +LI   +  GRLE+A     EM      ++ +   Y +LI  LC   ++++A+ L
Sbjct: 687 APVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRL 746

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           + +M   G +P    +  LI        W EAL+L
Sbjct: 747 YSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 781



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 127/502 (25%), Positives = 195/502 (38%), Gaps = 92/502 (18%)

Query: 295 EQARGLIRDMLK-LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
             A G   D LK  G + S  +YN ++   S  G +     +++EM   G      T   
Sbjct: 21  SHAAGDSEDPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGC 80

Query: 354 LIYGLCKWGRVSDA-------------------------------RHRFFEMLRKN-VIP 381
             + LCK GR +DA                                  F   +R N  IP
Sbjct: 81  FAHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIP 140

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           ++++Y TLL G+ +   +G    + + + +    P    +N+L+   C   D   A +L 
Sbjct: 141 NVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLL 200

Query: 442 ENMINQGILPDVITYTIMVNGS-------------------------------------- 463
             M   G  P  + Y I + GS                                      
Sbjct: 201 NRMTTCGCPPGYVVYNIFI-GSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANF 259

Query: 464 ----CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
               C +G    A +   EM+RKG  PD   Y+  I          +A+ L +EM   G 
Sbjct: 260 ARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGV 319

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
            PD+ TY +L+   CK G +E+A  L  +M   G  P  +TYT++IHA L+   + +  D
Sbjct: 320 TPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQAND 379

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF----------------MYFSEMQVKG 623
           +F+ M+  G  P  VTY  L+      G +  AF                 YF       
Sbjct: 380 IFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHT 439

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
           + PNV+TY AL++GLC+  ++D A+ L   M   G  PN   Y  LI+  C AG    A 
Sbjct: 440 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQ 499

Query: 684 RLYKEMLDREIEPDYCTHSALL 705
            ++ +M      P   T+++L+
Sbjct: 500 EVFLQMTKCGYLPSVHTYTSLI 521



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 130/522 (24%), Positives = 222/522 (42%), Gaps = 66/522 (12%)

Query: 84  QAVVSDPELLVRVLNRIREKPRIALRFFRWVETQ-PGVKRDEFVFCTILEILIESGLLRS 142
           +  V D     +V+  +    ++   F  + E +  GV  D + +  +++   ++GL+  
Sbjct: 282 KGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQ 341

Query: 143 AYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRN 202
           A W+ E +  V            G S   ++     L+  Y K   V Q   +F++M+  
Sbjct: 342 AQWLFEEMRSV------------GCSP--TVVTYTALIHAYLKAKQVPQANDIFHRMVDA 387

Query: 203 GLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMG---------------EFGIKPSIVTY 246
           G  P+      ++  L   G   KA EVY +++G                  + P++VTY
Sbjct: 388 GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 447

Query: 247 NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
             ++D  CK  ++  A ELL  M   GC PN + Y+ LI GF + G+++ A+ +   M K
Sbjct: 448 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 507

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
            G   S H+Y  +I    + G L  A+ +  +M+     P + TY  +I GLC+ G    
Sbjct: 508 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 567

Query: 367 ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
           A      M  K   P++++Y  L+ G  ++G I  +  LF ++  +   P  VTY  LI+
Sbjct: 568 ALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLIN 627

Query: 427 GLCRYGDLEVAQQL---------------------------------KENMINQGILPDV 453
            LC  G L+ A+ L                                  E M + G +P  
Sbjct: 628 HLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIA 687

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLR--KGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
             Y ++++   K G L +A E   EM+     ++ D   Y + I          EA+RL 
Sbjct: 688 PVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLY 747

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            EM  +GF P+L  +  L+ GL ++   +EA +L   +  +G
Sbjct: 748 SEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEG 789



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 82/267 (30%), Positives = 132/267 (49%), Gaps = 4/267 (1%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   ++  + V ++ML++   P+V     +I  L   G S KA ++  +M E G  P++V
Sbjct: 526 KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVV 585

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY  ++D   K G++  +L+L  +M  +GCSPN VTY VLI      G L++AR L+ +M
Sbjct: 586 TYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEM 645

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
            +         Y   I G+S+    + +L + EEM + G  P    Y +LI    K GR+
Sbjct: 646 KQTYWPKYLQGYRCAIQGFSKS--FIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRL 703

Query: 365 SDARHRFFEMLR--KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
             A     EM+    +V  D   Y +L+   C +  + EAF L+ E+  R  VP +  + 
Sbjct: 704 EIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFV 763

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGI 449
            LI GL      + A QL   + ++G+
Sbjct: 764 CLIKGLVEVKKWDEALQLCYGICHEGV 790


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 160/507 (31%), Positives = 255/507 (50%), Gaps = 22/507 (4%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKARE-------VYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           PDV+  N +I      G+ + ARE       +  M  +FG+ PS+ T+N +L   CK G+
Sbjct: 152 PDVETWNVLI-----TGYCL-AREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGK 205

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           +  A++  +E   R    +  T+++LI G  + G + QA  L ++    G  +  H+Y  
Sbjct: 206 VLAAMD-HFEAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTA 264

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           I+   ++   + EA+ L E++   G  PT+ATYN L+ GLCK GR+ +A     +++   
Sbjct: 265 IVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG 324

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
             PD+++Y +L+ G  +     EA+ LF E+ SR L    V Y  LI GL + G +  A 
Sbjct: 325 CTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQAS 384

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
            + + M + G +PDV+T + M++G  K G +  A   F  M  +GL P+   Y+  I G 
Sbjct: 385 SVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGL 444

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
            K      A  +  +M      PD ITYN+L+ GLCK G +E A     +M+  G  PD 
Sbjct: 445 CKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDV 504

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
            TY  +I    + G+      + ++M     S +   Y+ L+      G+LE   M F E
Sbjct: 505 YTYNILISGLCKAGNTDAACGVLDDM-----SSSRFVYSSLVDGLCKSGKLEGGCMLFHE 559

Query: 619 MQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGN 678
           M+  G+  N  T   LI  LC+  R+D+A  LF  + +EG +P+ Y Y  +I+    +G 
Sbjct: 560 MERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNSIISALIKSGK 617

Query: 679 WQEALRLYKEMLDREIEPDYCTHSALL 705
             E   +Y+EM  R  +PD  T++ALL
Sbjct: 618 VNEGQAVYQEMT-RWWKPDRVTYNALL 643



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 146/480 (30%), Positives = 244/480 (50%), Gaps = 12/480 (2%)

Query: 213 RIIKVLRDNGFSVKAREVYRMMGE--FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQ 270
           +I + L+D      A E+++ +    FG + S+ T N +LD F +    +EA  LL    
Sbjct: 90  KIFQCLKDADL---AWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNEL 146

Query: 271 GRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK-LGLKVSAHSYNPIICGYSEKGLL 329
                P+  T+NVLITG+    E E+A  +IR+M +  G+  S  ++N ++ G  + G +
Sbjct: 147 ATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKV 206

Query: 330 VEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTL 389
           + A++   E V R +  + AT++ILI GL K G +  A     E        DI +Y  +
Sbjct: 207 LAAMD-HFEAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAI 265

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
           +    ++  I EA  L +++ +    PT+ TYN L++GLC+ G LE A  L   +++ G 
Sbjct: 266 VNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGC 325

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
            PDV+TYT +++G  K      A + F EM  +GL  D   YT  I G L+ G   +A  
Sbjct: 326 TPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASS 385

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           + + M + G  PD++T + ++ GL K G +  A  + + M   G  P+ + Y+++IH   
Sbjct: 386 VYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLC 445

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
           +   +    ++   M +   +P  +TY +LI      G +E A  +F EM   G +P+V 
Sbjct: 446 KARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVY 505

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           TYN LI+GLC+    D A G+  DM       +++ Y+ L++  C +G  +    L+ EM
Sbjct: 506 TYNILISGLCKAGNTDAACGVLDDMSS-----SRFVYSSLVDGLCKSGKLEGGCMLFHEM 560



 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 138/448 (30%), Positives = 230/448 (51%), Gaps = 8/448 (1%)

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
           +I  L   G  ++A  + +     G    I TY  +++   K  ++QEA+ L+ ++   G
Sbjct: 230 LINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANG 289

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
           C+P   TYN L+ G  + G LE+A  L+R ++  G      +Y  +I G  ++    EA 
Sbjct: 290 CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAY 349

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
            L +EM +RG+A     Y  LI GL + G++  A   +  M     +PD+++ +T++ G 
Sbjct: 350 KLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGL 409

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
            ++G IG A  +F  + +R L P  V Y+ LI GLC+   ++ A ++   M      PD 
Sbjct: 410 SKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDT 469

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
           ITY I+++G CK G++  AR FF+EML  G +PD + Y   I+G  K G+T  A  + ++
Sbjct: 470 ITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDD 529

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           M +  F      Y+ LV GLCK G LE    L  +M   G + +  T T +I    +   
Sbjct: 530 MSSSRF-----VYSSLVDGLCKSGKLEGGCMLFHEMERSG-VANSQTRTRLIFHLCKANR 583

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
           +     LFN + ++G+ P    Y  +I A    G++      + EM  +  +P+ +TYNA
Sbjct: 584 VDEAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVNEGQAVYQEM-TRWWKPDRVTYNA 641

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILP 661
           L+NG+    R+D+A+  +++M   G +P
Sbjct: 642 LLNGMIGANRMDRAHYYYLEMTGRGYVP 669



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 136/466 (29%), Positives = 223/466 (47%), Gaps = 8/466 (1%)

Query: 171 VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV 230
           VS     +L+    K  M+ Q   +  +   NG   D+     I+  L  N    +A  +
Sbjct: 222 VSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVAL 281

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
              +   G  P+I TYN +L+  CK G ++EA++LL ++   GC+P+ VTY  LI G  +
Sbjct: 282 MEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGK 341

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
                +A  L ++M   GL +    Y  +I G  + G + +A ++ + M + G  P + T
Sbjct: 342 EKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVT 401

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
            + +I GL K GR+  A   F  M  + + P+ + Y+ L++G C++  +  A  +  +++
Sbjct: 402 LSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMK 461

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
                P  +TYN LIDGLC+ GD+E A+   + M+  G  PDV TY I+++G CK GN  
Sbjct: 462 KAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTD 521

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            A    ++M        RF Y++ + G  K G       L  EM   G         ++ 
Sbjct: 522 AACGVLDDM-----SSSRFVYSSLVDGLCKSGKLEGGCMLFHEMERSGVANSQTRTRLIF 576

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
           H LCK   ++EA  L   +  +G +P    Y SII A ++ G +  G+ ++  M R    
Sbjct: 577 H-LCKANRVDEAVSLFNAIRKEG-MPHPYAYNSIISALIKSGKVNEGQAVYQEMTR-WWK 633

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
           P  VTY  L++      R++ A  Y+ EM  +G  P V   + L +
Sbjct: 634 PDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGYVPPVSILHKLAD 679



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/401 (29%), Positives = 200/401 (49%), Gaps = 2/401 (0%)

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
           + G + S H+ N ++  ++      EA NL +  +     P + T+N+LI G C      
Sbjct: 112 RFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPE 171

Query: 366 DARHRFFEMLRK-NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
           +A     EM     V P + ++N +L+G C+SG +  A   F+ +R R++  +  T++ L
Sbjct: 172 EAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVR-RSMPVSAATFSIL 230

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           I+GL + G +  A  L +     G   D+ TYT +VN   K   +  A     ++   G 
Sbjct: 231 INGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGC 290

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            P    Y   + G  K+G   EA  L  +++  G  PD++TY  L+ GL K     EA +
Sbjct: 291 TPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYK 350

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           L ++M   G   D + YT++I   L+ G + +   ++  M   G  P +VT + +I   +
Sbjct: 351 LFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLS 410

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
             GR+  A   F  M+ +G+ PN + Y+ALI+GLC+ R++D A  +   M++    P+  
Sbjct: 411 KAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTI 470

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           TY ILI+  C +G+ + A   + EML+   +PD  T++ L+
Sbjct: 471 TYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILI 511


>gi|449433161|ref|XP_004134366.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 917

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 146/516 (28%), Positives = 256/516 (49%), Gaps = 1/516 (0%)

Query: 186 KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVT 245
           K      L + N M+ NG  P +     II      G    AR+ +  + + G+  + + 
Sbjct: 336 KGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIV 395

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           YN M+  + K  ++ +A  L  EM+ +   P+G+T+N L+ G  R G+ E    L+RD+ 
Sbjct: 396 YNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLS 455

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
             GL   +   +  + G    G   EA+ L E ++ +G+ P++  +N +I      G   
Sbjct: 456 VSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEE 515

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
            A + +  M++  + P   + ++LL    R G++ EA++   ++  +    T + +  L+
Sbjct: 516 RAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLL 575

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           DG  R G + +A+ L   M  +G+ PD + +   +NG C  G ++ A + F++MLRKG  
Sbjct: 576 DGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFV 635

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           P+ F Y + I G  K+G  +EA +L  EM  +G  PD+ T N+++ GLCK G ++ A E 
Sbjct: 636 PNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIET 695

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
              M   G  PD +TY ++I    +  D+    DL   M   G  P L TY + IH +  
Sbjct: 696 FMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCT 755

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
             ++  A M   E+   GI PN +TYN +IN +C +  +D A  L   + +   +PN  T
Sbjct: 756 VRKINRAVMILEELISVGIVPNTVTYNTMINAVCNV-ILDHAMILTAKLLKMAFVPNTVT 814

Query: 666 YTILINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
             +L+++ C  G  ++A+   +++ +  ++ D  TH
Sbjct: 815 VNVLLSQFCKQGMPEKAIFWGQKLSEIHLDFDETTH 850



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 140/480 (29%), Positives = 236/480 (49%)

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           +A E+   M E G+ P+    + +     + G+     +L  ++  +G  PN  T+N+LI
Sbjct: 236 EALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFTFNLLI 295

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
             F R G       L+  M K   +   +SYN +I     KG    AL+L   M+  G  
Sbjct: 296 LEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCK 355

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P++AT+  +I   CK G V  AR  F E+    +  + I YN ++ GY ++ +I +A LL
Sbjct: 356 PSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLL 415

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
           F+E+R++++VP  +T+NTL+ G  RYG  E   +L  ++   G+L D     + V G C 
Sbjct: 416 FEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCW 475

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
            G    A +    +L KG+ P   A+ + IA     G    A+     M+  G  P   T
Sbjct: 476 AGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSST 535

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
            + L+  L + GSL+EA   L  M+  GF   ++ +T ++     +G +     L+N M 
Sbjct: 536 CSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMK 595

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
            +G+ P  V +   I+     G +  A+  FS+M  KG  PN   YN+LI G C++ +++
Sbjct: 596 GRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLN 655

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +A  L  +M + G+LP+ +T  ++I   C  G  + A+  + +M    + PD  T++ L+
Sbjct: 656 EALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLI 715



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 138/511 (27%), Positives = 251/511 (49%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F  ++R G  P+    N +I      G++     +  +MG+F  +P + +YN ++++ C
Sbjct: 275 LFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANC 334

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
            +G+   AL LL  M   GC P+  T+  +I  F + G +E AR    ++  +GL  +  
Sbjct: 335 LKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTI 394

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
            YN +I GY +   + +A  L EEM T+ + P   T+N L+ G  ++G+  D      ++
Sbjct: 395 VYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDL 454

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
               ++ D    +  + G C +G   EA  L + L  + + P+VV +N++I      G  
Sbjct: 455 SVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLE 514

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           E A      M+  G+ P   T + ++    + G+L  A     +M+ KG      A+T  
Sbjct: 515 ERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVL 574

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           + G  ++G  + A  L  EM  +G  PD + +   ++GLC  G + +A ++   M+  GF
Sbjct: 575 LDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGF 634

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
           +P++  Y S+I    ++G L     L   M ++GL P + T  ++I     +GR++LA  
Sbjct: 635 VPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIE 694

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F +M   G+ P+++TYN LI+G C+   +  A  L + M + G  P+  TY I I+  C
Sbjct: 695 TFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYC 754

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
                  A+ + +E++   I P+  T++ ++
Sbjct: 755 TVRKINRAVMILEELISVGIVPNTVTYNTMI 785



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 151/526 (28%), Positives = 236/526 (44%), Gaps = 70/526 (13%)

Query: 247 NTMLDSFCKEGEMQEALELL-------------------------------WEMQG---- 271
           +T++ +F K     EALE+L                               W++ G    
Sbjct: 222 DTLMRAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVR 281

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
           +G  PN  T+N+LI  F R G       L+  M K   +   +SYN +I     KG    
Sbjct: 282 KGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQSSY 341

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
           AL+L   M+  G  P++AT+  +I   CK G V  AR  F E+    +  + I YN ++ 
Sbjct: 342 ALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMIS 401

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
           GY ++ +I +A LLF+E+R++++VP  +T+NTL+ G  RYG  E   +L  ++   G+L 
Sbjct: 402 GYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLH 461

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE------------- 498
           D     + V G C  G    A +    +L KG+ P   A+ + IA               
Sbjct: 462 DSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERAFYAY 521

Query: 499 ----------------------LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
                                 ++ G   EA+    +M+ KGFP   + + VL+ G  ++
Sbjct: 522 GIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRI 581

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G++  A  L  +M G G  PD + + + I+     G +    D+F++MLRKG  P    Y
Sbjct: 582 GAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVY 641

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
             LI      G+L  A     EM  +G+ P++ T N +I GLC+  R+  A   F+DM  
Sbjct: 642 NSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCR 701

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
            G+ P+  TY  LI+  C A +   A  L  +M D   EPD  T++
Sbjct: 702 MGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYN 747



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 121/421 (28%), Positives = 194/421 (46%), Gaps = 47/421 (11%)

Query: 130 ILEILIESGLLRSAYWVVETVVCVNMHG-------ILDVLIGGGLSSCVSIKILDLLLLI 182
           +L  L  SGLL  +     TV  +   G       +L+ L+G G+    S+   + ++  
Sbjct: 450 LLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPP--SVVAFNSIIAA 507

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRI-IKVLRDNGFSVKAREVYRMMGEFGIKP 241
           Y    + E+    +  M++ GL P    C+ + I ++R          +Y M+ + G   
Sbjct: 508 YGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDK-GFPV 566

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
           + + +  +LD + + G +  A  L  EM+GRG  P+ V +   I G   +G +  A  + 
Sbjct: 567 TNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVF 626

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
            DML+ G   +   YN +I G+ + G L EAL L  EM  RG+ P + T N++I GLCK 
Sbjct: 627 SDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQ 686

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           GR+  A   F +M R  + PDI++YNTL+ GYC++ ++G A  L  ++      P + TY
Sbjct: 687 GRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTY 746

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           N  I G C    +  A  + E +I+ GI+P+ +TY  M+N  C            N +L 
Sbjct: 747 NIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMINAVC------------NVIL- 793

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
                                    A  L  ++L   F P+ +T NVL+   CK G  E+
Sbjct: 794 -----------------------DHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEK 830

Query: 542 A 542
           A
Sbjct: 831 A 831



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/343 (23%), Positives = 148/343 (43%), Gaps = 7/343 (2%)

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
           HR +E        D    +TL+  + +S    EA  +  ++R   + P     + L   L
Sbjct: 211 HRVYE-------SDYSVLDTLMRAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLL 263

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
            R GD     +L  +++ +G  P+  T+ +++   C+ G   +     + M +   +PD 
Sbjct: 264 IRAGDCGAVWKLFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDV 323

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
           ++Y   I      G +S A  L   M+  G  P + T+  ++   CK G++E A +   +
Sbjct: 324 YSYNIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDE 383

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           +   G   + I Y  +I   ++  D+ +   LF  M  K + P  +T+  L+  H   G+
Sbjct: 384 IEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGK 443

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
            E       ++ V G+  +    +  + GLC   R D+A  L  ++  +GI P+   +  
Sbjct: 444 EEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNS 503

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDK 711
           +I    NAG  + A   Y  M+   + P   T S+LL+  + K
Sbjct: 504 IIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRK 546


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 161/522 (30%), Positives = 255/522 (48%), Gaps = 24/522 (4%)

Query: 207 DVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELL 266
           D   C  +I  L +  +  +A      M      P++VTY T+L  F K+ ++     ++
Sbjct: 41  DTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRII 100

Query: 267 WEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII---CGY 323
             M   GC+PN   +N L+  +    +   A  L+  M   G       YN  I   CG 
Sbjct: 101 NMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICG- 159

Query: 324 SEKGLLVEALNLEEEMVTRGVAP--TLATYNILIYG--LCKWGRVSDARHRFFEMLRKNV 379
            EK    + L+L E++    +A    L   N+  +   LC  G+   A     EM+RK  
Sbjct: 160 QEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGF 219

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
           +PD  +Y+ ++   C +  + +AFLLF E++   + P V TY  LID  C+ G +E AQ 
Sbjct: 220 VPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQW 279

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           L E M + G  P V+TYT +++   K   +  A + F+ M+  G +P+   Y   + G  
Sbjct: 280 LFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLC 339

Query: 500 KLGDTSEAYRLQEEMLAKG--------FP--------PDLITYNVLVHGLCKLGSLEEAN 543
           K G+ S+A+ +  +++           FP        P+++TY  LV GLCK   ++ A+
Sbjct: 340 KAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAH 399

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
           ELL  M+  G  P+HI Y ++I    + G +   +++F  M + G  P++ TYT LI   
Sbjct: 400 ELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRM 459

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
              GRL+LA    S+M      PNV+TY A+I+GLCR+   ++A  L   MEE+G  PN 
Sbjct: 460 FKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNV 519

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            TYT LI+    AG    +L L+ +M  +   P+Y T+  L+
Sbjct: 520 VTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLI 561



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 174/638 (27%), Positives = 292/638 (45%), Gaps = 70/638 (10%)

Query: 112 RWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCV 171
           RW +    ++R++F   T+L   + SGL+ ++Y+             +  L     +SC+
Sbjct: 25  RWADALDMIEREDFKLDTVLCTHMISGLMEASYF----------DEAMSFLHRMRCNSCI 74

Query: 172 -SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV 230
            ++     LL  + KK  +  C  + N M+  G  P+    N ++    +      A ++
Sbjct: 75  PNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKL 134

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKE---------------------------------- 256
              M   G  P  V YN  + S C +                                  
Sbjct: 135 LNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANF 194

Query: 257 -------GEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
                  G+  +A +L+ EM  +G  P+  TY+ +IT      ++E+A  L ++M  +G+
Sbjct: 195 ARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGV 254

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
               ++Y  +I  + + GL+ +A  L EEM + G +PT+ TY  LI+   K  +V  A  
Sbjct: 255 TPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQAND 314

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL----------------RSRN 413
            F  M+     P+ ++Y  L+ G C++GNI +AF ++ +L                    
Sbjct: 315 IFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHT 374

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           L P VVTY  L+DGLC+   ++ A +L + M++ G  P+ I Y  +++G CK G +  A+
Sbjct: 375 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQ 434

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
           E F +M + G  P    YT+ I    K G    A ++  +ML     P+++TY  ++ GL
Sbjct: 435 EVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGL 494

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
           C++G  E+A +LL  M   G  P+ +TYT++I    + G +    DLF  M RKG SP  
Sbjct: 495 CRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNY 554

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
           VTY VLI+   A G L+ A +   EM+       +  Y   I G    +    + G+  +
Sbjct: 555 VTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFS--KSFIASLGILEE 612

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           ME  G +P    Y +LI+    AG  + A+ L+KEM++
Sbjct: 613 MESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME 650



 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 146/515 (28%), Positives = 247/515 (47%), Gaps = 22/515 (4%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           ++   +  +M+R G +PD    +++I  L       KA  +++ M   G+ P + TY  +
Sbjct: 205 DKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTIL 264

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           +DSFCK G +++A  L  EM+  GCSP  VTY  LI  + +  ++ QA  +   M+  G 
Sbjct: 265 IDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGC 324

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG----------------VAPTLATYNI 353
           + +  +Y  ++ G  + G + +A  +  +++                   +AP + TY  
Sbjct: 325 RPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGA 384

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           L+ GLCK  +V  A      ML     P+ I Y+ L+ G+C++G I  A  +F ++    
Sbjct: 385 LVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCG 444

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
            +P+V TY +LID + + G L++A ++   M+     P+V+TYT M++G C++G    A 
Sbjct: 445 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKAL 504

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
           +  + M  KG  P+   YT  I G  K G    +  L  +M  KG  P+ +TY VL++ L
Sbjct: 505 KLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHL 564

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHIT-YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           C  G L++A  LL +M    + P ++  Y   I    +      G  +   M   G  P 
Sbjct: 565 CAAGLLDKARLLLGEM-KQTYWPKYLQGYRCAIQGFSKSFIASLG--ILEEMESYGTVPI 621

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQ--VKGIRPNVITYNALINGLCRLRRIDQAYGL 650
              Y +LI   +  GRLE+A     EM      ++ +   Y +LI  LC   ++++A+ L
Sbjct: 622 APVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRL 681

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           + +M   G +P    +  LI        W EAL+L
Sbjct: 682 YSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 716



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 130/522 (24%), Positives = 222/522 (42%), Gaps = 66/522 (12%)

Query: 84  QAVVSDPELLVRVLNRIREKPRIALRFFRWVETQ-PGVKRDEFVFCTILEILIESGLLRS 142
           +  V D     +V+  +    ++   F  + E +  GV  D + +  +++   ++GL+  
Sbjct: 217 KGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQ 276

Query: 143 AYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRN 202
           A W+ E +  V            G S   ++     L+  Y K   V Q   +F++M+  
Sbjct: 277 AQWLFEEMRSV------------GCSP--TVVTYTALIHAYLKAKQVPQANDIFHRMVDA 322

Query: 203 GLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMG---------------EFGIKPSIVTY 246
           G  P+      ++  L   G   KA EVY +++G                  + P++VTY
Sbjct: 323 GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 382

Query: 247 NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
             ++D  CK  ++  A ELL  M   GC PN + Y+ LI GF + G+++ A+ +   M K
Sbjct: 383 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 442

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
            G   S H+Y  +I    + G L  A+ +  +M+     P + TY  +I GLC+ G    
Sbjct: 443 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 502

Query: 367 ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
           A      M  K   P++++Y  L+ G  ++G I  +  LF ++  +   P  VTY  LI+
Sbjct: 503 ALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLIN 562

Query: 427 GLCRYGDLEVAQQL---------------------------------KENMINQGILPDV 453
            LC  G L+ A+ L                                  E M + G +P  
Sbjct: 563 HLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIA 622

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLR--KGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
             Y ++++   K G L +A E   EM+     ++ D   Y + I          EA+RL 
Sbjct: 623 PVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLY 682

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            EM  +GF P+L  +  L+ GL ++   +EA +L   +  +G
Sbjct: 683 SEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEG 724



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 82/267 (30%), Positives = 132/267 (49%), Gaps = 4/267 (1%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   ++  + V ++ML++   P+V     +I  L   G S KA ++  +M E G  P++V
Sbjct: 461 KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVV 520

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY  ++D   K G++  +L+L  +M  +GCSPN VTY VLI      G L++AR L+ +M
Sbjct: 521 TYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEM 580

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
            +         Y   I G+S+    + +L + EEM + G  P    Y +LI    K GR+
Sbjct: 581 KQTYWPKYLQGYRCAIQGFSKS--FIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRL 638

Query: 365 SDARHRFFEMLR--KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
             A     EM+    +V  D   Y +L+   C +  + EAF L+ E+  R  VP +  + 
Sbjct: 639 EIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFV 698

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGI 449
            LI GL      + A QL   + ++G+
Sbjct: 699 CLIKGLVEVKKWDEALQLCYGICHEGV 725



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/233 (22%), Positives = 97/233 (41%), Gaps = 9/233 (3%)

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M   G   DRF          K G  ++A  + E    + F  D +    ++ GL +   
Sbjct: 1   MSESGFCMDRFTVGCFAHALCKEGRWADALDMIER---EDFKLDTVLCTHMISGLMEASY 57

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
            +EA   L +M  +  IP+ +TY +++   L+   L   + + N M+ +G +P    +  
Sbjct: 58  FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 117

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR------IDQAYGLFI 652
           L+H++        A+   + M   G  P  + YN  I  +C   +      +D A  ++ 
Sbjct: 118 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYG 177

Query: 653 DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +M     + NK          C  G + +A +L KEM+ +   PD  T+S ++
Sbjct: 178 EMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVI 230


>gi|8920567|gb|AAF81289.1|AC027656_6 Contains similarity to a hypothetical protein F23N19.4 gi|6630464
           from Arabidopsis thaliana BAC F23N19 gb|AC007190. It
           contains a PPR repeat domain PF|01535 [Arabidopsis
           thaliana]
          Length = 797

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 154/544 (28%), Positives = 280/544 (51%), Gaps = 20/544 (3%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           + D+LL + ++  MV+  L +  KM    L    ++ N ++   R+     K  +VY+ +
Sbjct: 139 VWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETD---KMWDVYKEI 195

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
            +     +  TY+T++D  C++ ++++A+  L   + +   P+ V++N +++G+ + G +
Sbjct: 196 KD----KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFV 251

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           + A+     +LK GL  S +S+N +I G    G + EAL L  +M   GV P   TYNIL
Sbjct: 252 DMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNIL 311

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
             G    G +S A     +ML K + PD+I+Y  LL G C+ GNI    +L  ++ SR  
Sbjct: 312 AKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGF 371

Query: 415 -VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
            + +++  + ++ GLC+ G ++ A  L   M   G+ PD++ Y+I+++G CK+G   MA 
Sbjct: 372 ELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMAL 431

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
             ++EM  K + P+   +   + G  + G   EA  L + +++ G   D++ YN+++ G 
Sbjct: 432 WLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGY 491

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
            K G +EEA EL + ++  G  P   T+ S+I+   +  ++   R + + +   GL+P++
Sbjct: 492 AKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSV 551

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC------------RL 641
           V+YT L+ A+A  G  +       EM+ +GI P  +TY+ +  GLC            R 
Sbjct: 552 VSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRE 611

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
           R  ++      DME EGI P++ TY  +I   C   +   A    + M  R ++    T+
Sbjct: 612 RIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATY 671

Query: 702 SALL 705
           + L+
Sbjct: 672 NILI 675



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 155/524 (29%), Positives = 263/524 (50%), Gaps = 24/524 (4%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K   V+     F  +L+ GL+P V + N +I  L   G   +A E+   M + G++P 
Sbjct: 245 YCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPD 304

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            VTYN +   F   G +  A E++ +M  +G SP+ +TY +L+ G  + G ++    L++
Sbjct: 305 SVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLK 364

Query: 303 DMLKLGLKV-SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
           DML  G ++ S    + ++ G  + G + EAL+L  +M   G++P L  Y+I+I+GLCK 
Sbjct: 365 DMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKL 424

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           G+   A   + EM  K ++P+  ++  LL G C+ G + EA  L D L S      +V Y
Sbjct: 425 GKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLY 484

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           N +IDG  + G +E A +L + +I  GI P V T+  ++ G CK  N++ AR+  + +  
Sbjct: 485 NIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKL 544

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
            GL P   +YTT +      G+T     L+ EM A+G PP  +TY+V+  GLC+    E 
Sbjct: 545 YGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHEN 604

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
            N +LR+ +                         + +    +M  +G+ P  +TY  +I 
Sbjct: 605 CNHVLRERI-----------------------FEKCKQGLRDMESEGIPPDQITYNTIIQ 641

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
                  L  AF++   M+ + +  +  TYN LI+ LC    I +A      ++E+ +  
Sbjct: 642 YLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSL 701

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +K+ YT LI  +C  G+ + A++L+ ++L R        +SA++
Sbjct: 702 SKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVI 745



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 129/457 (28%), Positives = 239/457 (52%), Gaps = 9/457 (1%)

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           + ++L +L +M+ +  + +  +YN ++  F    ++      I+D        + H+Y+ 
Sbjct: 153 VDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDK-------NEHTYST 205

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           ++ G   +  L +A+        + + P++ ++N ++ G CK G V  A+  F  +L+  
Sbjct: 206 VVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCG 265

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
           ++P + S+N L+ G C  G+I EA  L  ++    + P  VTYN L  G    G +  A 
Sbjct: 266 LVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAW 325

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF-AYTTQIAG 497
           ++  +M+++G+ PDVITYTI++ G C++GN+ M      +ML +G + +     +  ++G
Sbjct: 326 EVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSG 385

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
             K G   EA  L  +M A G  PDL+ Y++++HGLCKLG  + A  L  +M     +P+
Sbjct: 386 LCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPN 445

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
             T+ +++    + G L   R L ++++  G +  +V Y ++I  +A  G +E A   F 
Sbjct: 446 SRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFK 505

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
            +   GI P+V T+N+LI G C+ + I +A  +   ++  G+ P+  +YT L++   N G
Sbjct: 506 VVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCG 565

Query: 678 NWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYK 714
           N +    L +EM    I P   T+S ++ K L + +K
Sbjct: 566 NTKSIDELRREMKAEGIPPTNVTYS-VIFKGLCRGWK 601



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 178/346 (51%), Gaps = 10/346 (2%)

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL-EVAQQLKENM 444
           ++ LL+   R   + ++  +  +++ +NL  +  +YN+++        + +V +++K+  
Sbjct: 140 WDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDK- 198

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
            N+       TY+ +V+G C+   L  A  F      K + P   ++ + ++G  KLG  
Sbjct: 199 -NEH------TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFV 251

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
             A      +L  G  P + ++N+L++GLC +GS+ EA EL   M   G  PD +TY  +
Sbjct: 252 DMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNIL 311

Query: 565 IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
                 +G +    ++  +ML KGLSP ++TYT+L+      G +++  +   +M  +G 
Sbjct: 312 AKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGF 371

Query: 625 RPN-VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
             N +I  + +++GLC+  RID+A  LF  M+ +G+ P+   Y+I+I+  C  G +  AL
Sbjct: 372 ELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMAL 431

Query: 684 RLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLGAE 729
            LY EM D+ I P+  TH ALLL    K   + A   L+SL    E
Sbjct: 432 WLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGE 477



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 159/342 (46%), Gaps = 24/342 (7%)

Query: 158 ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
           +LD LI  G    + I + ++++  Y K   +E+ L +F  ++  G+ P V   N +I  
Sbjct: 468 LLDSLISSG--ETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYG 525

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
                   +AR++  ++  +G+ PS+V+Y T++D++   G  +   EL  EM+  G  P 
Sbjct: 526 YCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPT 585

Query: 278 GVTYNVLITGFSRNGE------------LEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
            VTY+V+  G  R  +             E+ +  +RDM   G+     +YN II     
Sbjct: 586 NVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCR 645

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
              L  A    E M +R +  + ATYNILI  LC +G +  A    + +  +NV     +
Sbjct: 646 VKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFA 705

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           Y TL+  +C  G+   A  LF +L  R    ++  Y+ +I+ LCR   +  ++     M+
Sbjct: 706 YTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLML 765

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           +QGI PD+    +M+           + E  +  ++ GL PD
Sbjct: 766 SQGISPDLDICEVMIK----------SDELLSWTIKWGLLPD 797


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 157/505 (31%), Positives = 248/505 (49%), Gaps = 9/505 (1%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           +Q L +F ++L     P+    N +I+     G   +A  V+  M   G+ P+  T NT+
Sbjct: 14  DQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTL 73

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           L   C+ G+M  AL+L  EMQ     P   ++N+L+ GF   G +  A   ++DM K   
Sbjct: 74  LLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSS 133

Query: 310 KVSAHSYNPIICGY----SEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
            V+  +YN ++ G          L +A+   +EM   GV P L +Y+IL+  L   GR++
Sbjct: 134 SVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMA 193

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
           +A   F  M      PDI++YN L+ GYC+ G   EA  L  E+      P V TY+ +I
Sbjct: 194 EAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIII 250

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           +  C+   +E A ++   MI    +P+ +T+  ++ G CK G L  A + F EM + G +
Sbjct: 251 NCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCK 310

Query: 486 PDRFAYTTQIAGELKL-GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
                Y T I    K  G    A  L  ++   G  P ++TYN L+ G C    L EA +
Sbjct: 311 ATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQ 370

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
              +M G    P+ ITY+ +I    ++  ++       +M   G +PT+VTY  LI+   
Sbjct: 371 YFDEMEGK-CAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFC 429

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
             G L+ A ++F +M++ G  PN + +N LI+GLC+  R +    L   M  EG  P+  
Sbjct: 430 KCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVI 489

Query: 665 TYTILINENCNAGNWQEALRLYKEM 689
           TY  LI+  C+A   ++A RL+  M
Sbjct: 490 TYNCLISGLCSANRVEDAQRLFDGM 514



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 150/471 (31%), Positives = 231/471 (49%), Gaps = 11/471 (2%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P+  TYN ++  FCK G+M +A+ +  +M+  G  PN  T N L+ G    G++  A  L
Sbjct: 30  PNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKL 89

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
            R+M       ++ S+N ++ G+   G + +AL   ++M     +    TYN+++ GLC 
Sbjct: 90  FREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLC- 148

Query: 361 W-----GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
           W      R+  A   F EM    V PD+ SY+ LL     SG + EA  LF  +      
Sbjct: 149 WENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCS--- 205

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P ++TYN L+DG C+ G    AQ L + ++  G  P+V TY+I++N  CK+  +  A E 
Sbjct: 206 PDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEV 265

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
           F +M+     P+   + T IAG  K G   +A +L  EM   G    ++TYN L+  LCK
Sbjct: 266 FMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCK 325

Query: 536 L-GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
             G +  A +L  K+ G G  P  +TY S+I    +   L      F+ M  K  +P ++
Sbjct: 326 KRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVI 384

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           TY++LI       R++ A     +M+  G  P V+TY  LING C+   +  A   F  M
Sbjct: 385 TYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKM 444

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +  G  PN   +  LI+  C A    + LRL   M     +PD  T++ L+
Sbjct: 445 KLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLI 495



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 152/448 (33%), Positives = 231/448 (51%), Gaps = 9/448 (2%)

Query: 247 NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
           N +L       +  +AL L  E+     +PN  TYNVLI GF + G++ QA  +  DM  
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
            GL  +A + N ++ G  E G +  AL L  EM      PT A++NIL+ G    GRV D
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 367 ARHRFFEMLRKNVIPDIISYNTLLYGYC---RSGN-IGEAFLLFDELRSRNLVPTVVTYN 422
           A     +M + +      +YN +L G C   +S N + +A   F E+++  + P + +Y+
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            L+  L   G +  A  L   M      PD++TY ++++G CK+G    A+    E+L+ 
Sbjct: 181 ILLSALSDSGRMAEAHALFSAMTCS---PDIMTYNVLMDGYCKIGQTYEAQSLMKEILKA 237

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G +P+ F Y+  I    KL    EA+ +  +M+     P+ +T+N L+ G CK G LE+A
Sbjct: 238 GYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDA 297

Query: 543 NELLRKMVGDGFIPDHITYTSIIHA-SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
            +L  +M   G     +TY ++I +   + G +    DLFN +   GL+PT+VTY  LI 
Sbjct: 298 IKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQ 357

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
                 RL  A  YF EM+ K   PNVITY+ LI+GLC++RR+ +A     DM+  G  P
Sbjct: 358 GFCDARRLSEAMQYFDEMEGK-CAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTP 416

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEM 689
              TY  LIN  C  G  + AL  +++M
Sbjct: 417 TVVTYGGLINGFCKCGELKSALLFFEKM 444



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 155/511 (30%), Positives = 253/511 (49%), Gaps = 12/511 (2%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           ++L+  + K   + Q + VF+ M  +GLLP+    N ++  L + G    A +++R M  
Sbjct: 36  NVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQA 95

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF----SRNG 292
               P+  ++N +L  F   G +++AL  L +M+    S    TYN+++ G         
Sbjct: 96  GPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSAN 155

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
            LEQA    ++M   G++    SY+ ++   S+ G + EA  L   M     +P + TYN
Sbjct: 156 RLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYN 212

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
           +L+ G CK G+  +A+    E+L+    P++ +Y+ ++  YC+   + EA+ +F ++   
Sbjct: 213 VLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIES 272

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM-GNLSM 471
           N VP  VT+NTLI G C+ G LE A +L   M   G    ++TY  +++  CK  G +  
Sbjct: 273 NCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYT 332

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A + FN++   GL P    Y + I G       SEA +  +EM  K   P++ITY++L+ 
Sbjct: 333 AVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSILID 391

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           GLCK+  ++EA + L  M   G+ P  +TY  +I+   + G+L+     F  M   G +P
Sbjct: 392 GLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAP 451

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
             V +  LI       R          M  +G +P+VITYN LI+GLC   R++ A  LF
Sbjct: 452 NTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLF 511

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEA 682
             M      PN  T+  LI   C     +EA
Sbjct: 512 DGM---ACAPNVTTFNFLIRGLCAQKKVEEA 539



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 135/420 (32%), Positives = 221/420 (52%), Gaps = 12/420 (2%)

Query: 168 SSCVSIKILDLLL--LIYTKKSM--VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGF 223
           SS V+    +L+L  L +  KS   +EQ +  F +M  +G+ PD+++ + ++  L D+G 
Sbjct: 132 SSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGR 191

Query: 224 SVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNV 283
             +A  ++  M      P I+TYN ++D +CK G+  EA  L+ E+   G  PN  TY++
Sbjct: 192 MAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSI 248

Query: 284 LITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG 343
           +I  + +  ++E+A  +   M++     +A ++N +I G+ + G+L +A+ L  EM   G
Sbjct: 249 IINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIG 308

Query: 344 VAPTLATYNILIYGLCKW-GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
              T+ TYN LI  LCK  G V  A   F ++    + P I++YN+L+ G+C +  + EA
Sbjct: 309 CKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEA 368

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
              FDE+  +   P V+TY+ LIDGLC+   ++ A +  E+M   G  P V+TY  ++NG
Sbjct: 369 MQYFDEMEGK-CAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLING 427

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            CK G L  A  FF +M   G  P+   + T I G  K    ++  RL   M A+G  PD
Sbjct: 428 FCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPD 487

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
           +ITYN L+ GLC    +E+A  L   M      P+  T+  +I        +   R++ +
Sbjct: 488 VITYNCLISGLCSANRVEDAQRLFDGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILD 544



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/380 (32%), Positives = 195/380 (51%), Gaps = 9/380 (2%)

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
           +AL L +E++    AP   TYN+LI G CK G++  A   F +M    ++P+  + NTLL
Sbjct: 15  QALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLL 74

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
            G C  G +  A  LF E+++   +PT  ++N L+ G    G +  A    ++M      
Sbjct: 75  LGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSS 134

Query: 451 PDVITYTIMVNGSC---KMGN-LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSE 506
               TY +++ G C   K  N L  A EFF EM   G++PD  +Y   ++     G  +E
Sbjct: 135 VATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAE 194

Query: 507 AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
           A+ L   M      PD++TYNVL+ G CK+G   EA  L+++++  G+ P+  TY+ II+
Sbjct: 195 AHALFSAMTCS---PDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIIN 251

Query: 567 ASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRP 626
              ++  +    ++F  M+     P  VT+  LI      G LE A   F+EM+  G + 
Sbjct: 252 CYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKA 311

Query: 627 NVITYNALINGLCRLR-RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
            ++TYN LI+ LC+ R  +  A  LF  +E  G+ P   TY  LI   C+A    EA++ 
Sbjct: 312 TIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQY 371

Query: 686 YKEMLDREIEPDYCTHSALL 705
           + EM + +  P+  T+S L+
Sbjct: 372 FDEM-EGKCAPNVITYSILI 390



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 4/203 (1%)

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           N L+ GL      ++A  L ++++   F P+  TY  +I    + G + +   +F++M  
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
            GL P   T   L+      G++  A   F EMQ     P   ++N L+ G     R+  
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 647 AYGLFIDMEEEGILPNKYTYTILIN----ENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
           A     DM +        TY +++     EN +A   ++A+  +KEM    +EPD  ++ 
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180

Query: 703 ALLLKQLDKDYKVHAVEYLESLT 725
            LL    D      A     ++T
Sbjct: 181 ILLSALSDSGRMAEAHALFSAMT 203


>gi|240254074|ref|NP_172820.4| PPR repeat-containing protein [Arabidopsis thaliana]
 gi|332190928|gb|AEE29049.1| PPR repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 154/544 (28%), Positives = 280/544 (51%), Gaps = 20/544 (3%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           + D+LL + ++  MV+  L +  KM    L    ++ N ++   R+     K  +VY+ +
Sbjct: 126 VWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETD---KMWDVYKEI 182

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
            +     +  TY+T++D  C++ ++++A+  L   + +   P+ V++N +++G+ + G +
Sbjct: 183 KD----KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFV 238

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           + A+     +LK GL  S +S+N +I G    G + EAL L  +M   GV P   TYNIL
Sbjct: 239 DMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNIL 298

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
             G    G +S A     +ML K + PD+I+Y  LL G C+ GNI    +L  ++ SR  
Sbjct: 299 AKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGF 358

Query: 415 -VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
            + +++  + ++ GLC+ G ++ A  L   M   G+ PD++ Y+I+++G CK+G   MA 
Sbjct: 359 ELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMAL 418

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
             ++EM  K + P+   +   + G  + G   EA  L + +++ G   D++ YN+++ G 
Sbjct: 419 WLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGY 478

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
            K G +EEA EL + ++  G  P   T+ S+I+   +  ++   R + + +   GL+P++
Sbjct: 479 AKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSV 538

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC------------RL 641
           V+YT L+ A+A  G  +       EM+ +GI P  +TY+ +  GLC            R 
Sbjct: 539 VSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRE 598

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
           R  ++      DME EGI P++ TY  +I   C   +   A    + M  R ++    T+
Sbjct: 599 RIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATY 658

Query: 702 SALL 705
           + L+
Sbjct: 659 NILI 662



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 155/524 (29%), Positives = 263/524 (50%), Gaps = 24/524 (4%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K   V+     F  +L+ GL+P V + N +I  L   G   +A E+   M + G++P 
Sbjct: 232 YCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPD 291

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            VTYN +   F   G +  A E++ +M  +G SP+ +TY +L+ G  + G ++    L++
Sbjct: 292 SVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLK 351

Query: 303 DMLKLGLKV-SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
           DML  G ++ S    + ++ G  + G + EAL+L  +M   G++P L  Y+I+I+GLCK 
Sbjct: 352 DMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKL 411

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           G+   A   + EM  K ++P+  ++  LL G C+ G + EA  L D L S      +V Y
Sbjct: 412 GKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLY 471

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           N +IDG  + G +E A +L + +I  GI P V T+  ++ G CK  N++ AR+  + +  
Sbjct: 472 NIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKL 531

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
            GL P   +YTT +      G+T     L+ EM A+G PP  +TY+V+  GLC+    E 
Sbjct: 532 YGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHEN 591

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
            N +LR+ +                         + +    +M  +G+ P  +TY  +I 
Sbjct: 592 CNHVLRERI-----------------------FEKCKQGLRDMESEGIPPDQITYNTIIQ 628

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
                  L  AF++   M+ + +  +  TYN LI+ LC    I +A      ++E+ +  
Sbjct: 629 YLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSL 688

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +K+ YT LI  +C  G+ + A++L+ ++L R        +SA++
Sbjct: 689 SKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVI 732



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 211/412 (51%), Gaps = 30/412 (7%)

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
           + E  +++E L L+EE   R    T   +++L++   +   V D+ +   +M  +N+   
Sbjct: 100 FKELQVILEQL-LQEEGTFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVS 158

Query: 383 IISYNTLLY----------------------------GYCRSGNIGEAFLLFDELRSRNL 414
             SYN++LY                            G CR   + +A L       +++
Sbjct: 159 TQSYNSVLYHFRETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDI 218

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P+VV++N+++ G C+ G +++A+     ++  G++P V ++ I++NG C +G+++ A E
Sbjct: 219 GPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALE 278

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
             ++M + G++PD   Y     G   LG  S A+ +  +ML KG  PD+ITY +L+ G C
Sbjct: 279 LASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQC 338

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL-EMGDLRRGRDLFNNMLRKGLSPTL 593
           +LG+++    LL+ M+  GF  + I   S++ + L + G +     LFN M   GLSP L
Sbjct: 339 QLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDL 398

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
           V Y+++IH     G+ ++A   + EM  K I PN  T+ AL+ GLC+   + +A  L   
Sbjct: 399 VAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDS 458

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +   G   +   Y I+I+    +G  +EAL L+K +++  I P   T ++L+
Sbjct: 459 LISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLI 510



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 177/346 (51%), Gaps = 10/346 (2%)

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL-EVAQQLKENM 444
           ++ LL+   R   + ++  +  +++ +NL  +  +YN+++        + +V +++K+  
Sbjct: 127 WDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDK- 185

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
                  +  TY+ +V+G C+   L  A  F      K + P   ++ + ++G  KLG  
Sbjct: 186 -------NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFV 238

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
             A      +L  G  P + ++N+L++GLC +GS+ EA EL   M   G  PD +TY  +
Sbjct: 239 DMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNIL 298

Query: 565 IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
                 +G +    ++  +ML KGLSP ++TYT+L+      G +++  +   +M  +G 
Sbjct: 299 AKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGF 358

Query: 625 RPN-VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
             N +I  + +++GLC+  RID+A  LF  M+ +G+ P+   Y+I+I+  C  G +  AL
Sbjct: 359 ELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMAL 418

Query: 684 RLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLGAE 729
            LY EM D+ I P+  TH ALLL    K   + A   L+SL    E
Sbjct: 419 WLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGE 464



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/329 (25%), Positives = 151/329 (45%), Gaps = 47/329 (14%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LLL   +K M+ +   + + ++ +G   D+   N +I     +G   +A E+++++ E G
Sbjct: 439 LLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETG 498

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           I PS+ T+N+++  +CK   + EA ++L  ++  G +P+ V+Y  L+  ++  G  +   
Sbjct: 499 ITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSID 558

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L R                                   EM   G+ PT  TY+++  GL
Sbjct: 559 ELRR-----------------------------------EMKAEGIPPTNVTYSVIFKGL 583

Query: 359 CKWGRVSDARH----RFFE--------MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
           C+  +  +  H    R FE        M  + + PD I+YNT++   CR  ++  AF+  
Sbjct: 584 CRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFL 643

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
           + ++SRNL  +  TYN LID LC YG +  A     ++  Q +      YT ++   C  
Sbjct: 644 EIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVK 703

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
           G+  MA + F+++L +G       Y+  I
Sbjct: 704 GDPEMAVKLFHQLLHRGFNVSIRDYSAVI 732



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 135/285 (47%), Gaps = 14/285 (4%)

Query: 158 ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
           +LD LI  G    + I + ++++  Y K   +E+ L +F  ++  G+ P V   N +I  
Sbjct: 455 LLDSLISSG--ETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYG 512

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
                   +AR++  ++  +G+ PS+V+Y T++D++   G  +   EL  EM+  G  P 
Sbjct: 513 YCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPT 572

Query: 278 GVTYNVLITGFSRNGE------------LEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
            VTY+V+  G  R  +             E+ +  +RDM   G+     +YN II     
Sbjct: 573 NVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCR 632

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
              L  A    E M +R +  + ATYNILI  LC +G +  A    + +  +NV     +
Sbjct: 633 VKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFA 692

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
           Y TL+  +C  G+   A  LF +L  R    ++  Y+ +I+ LCR
Sbjct: 693 YTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737


>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 149/465 (32%), Positives = 242/465 (52%)

Query: 174 KILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRM 233
           K  DLL  +Y    M  + L  F  M + G   D ++C   +  LR  G        +R 
Sbjct: 156 KFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRR 215

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M    ++ ++ +   +LD  CK G+++   +L+ E+  +G   N VTYN  I G+ +  +
Sbjct: 216 MVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLD 275

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           L     ++  M K G+  +  +Y  +I G+S  G + EA  L EEM  +G+   +  Y  
Sbjct: 276 LGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTS 335

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           +I   C+ G V  A   F EM  K +IP   +Y  L++G C++G +  A +L +E++ + 
Sbjct: 336 IISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKG 395

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           +    V +NTLIDG C  G ++ A +L+  M  +G+  DV  Y  + +G CK+     A+
Sbjct: 396 IDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAK 455

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
                M+ +G+ P+  ++TT I    K G+  EA R+  EM  KG  P++ITYNVL+ G 
Sbjct: 456 GLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGY 515

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
            K G+++EA++L  ++   G IPD  T TS+IH     G +     LF+ M ++GL P +
Sbjct: 516 SKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNV 575

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           VTYT +I   +  GR E AF  + EM+  G+ P+   Y++L+  L
Sbjct: 576 VTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 620



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 138/445 (31%), Positives = 234/445 (52%)

Query: 261 EALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII 320
           EALE    M+ +G   +  +  V +    R G+++      R M+ L ++V+ +S   ++
Sbjct: 173 EALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVL 232

Query: 321 CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
            G  ++G +     L +E+  +GV   + TYN  I G  K   +         M ++ V 
Sbjct: 233 DGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVA 292

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
            ++++Y  L++G+   G I EA  LF+E+R + +   V  Y ++I   CR G+++ A  L
Sbjct: 293 CNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVL 352

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
            + M ++G++P   TY  +++G CK G +  A+   NEM  KG+  +   + T I G  +
Sbjct: 353 FDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCE 412

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
            G   EA RLQ  M  KG   D+  YN +  GLCKL   +EA  LL  MV  G  P+ ++
Sbjct: 413 SGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMS 472

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           +T++I    + G+    + +F  M  KG  P ++TY VLI  ++ RG ++ A     E++
Sbjct: 473 FTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELE 532

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
            +G+ P+V T  +LI+G C   ++D A  LF +M + G++PN  TYT +I+     G  +
Sbjct: 533 NRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSE 592

Query: 681 EALRLYKEMLDREIEPDYCTHSALL 705
           EA +LY EM +  + PD   +S+L+
Sbjct: 593 EAFKLYDEMKETGLTPDDTVYSSLV 617


>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 149/465 (32%), Positives = 242/465 (52%)

Query: 174 KILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRM 233
           K  DLL  +Y    M  + L  F  M + G   D ++C   +  LR  G        +R 
Sbjct: 160 KFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRR 219

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M    ++ ++ +   +LD  CK G+++   +L+ E+  +G   N VTYN  I G+ +  +
Sbjct: 220 MVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLD 279

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           L     ++  M K G+  +  +Y  +I G+S  G + EA  L EEM  +G+   +  Y  
Sbjct: 280 LGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTS 339

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           +I   C+ G V  A   F EM  K +IP   +Y  L++G C++G +  A +L +E++ + 
Sbjct: 340 IISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKG 399

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           +    V +NTLIDG C  G ++ A +L+  M  +G+  DV  Y  + +G CK+     A+
Sbjct: 400 IDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAK 459

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
                M+ +G+ P+  ++TT I    K G+  EA R+  EM  KG  P++ITYNVL+ G 
Sbjct: 460 GLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGY 519

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
            K G+++EA++L  ++   G IPD  T TS+IH     G +     LF+ M ++GL P +
Sbjct: 520 SKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNV 579

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           VTYT +I   +  GR E AF  + EM+  G+ P+   Y++L+  L
Sbjct: 580 VTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 624



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 138/445 (31%), Positives = 234/445 (52%)

Query: 261 EALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII 320
           EALE    M+ +G   +  +  V +    R G+++      R M+ L ++V+ +S   ++
Sbjct: 177 EALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVL 236

Query: 321 CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
            G  ++G +     L +E+  +GV   + TYN  I G  K   +         M ++ V 
Sbjct: 237 DGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVA 296

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
            ++++Y  L++G+   G I EA  LF+E+R + +   V  Y ++I   CR G+++ A  L
Sbjct: 297 CNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVL 356

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
            + M ++G++P   TY  +++G CK G +  A+   NEM  KG+  +   + T I G  +
Sbjct: 357 FDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCE 416

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
            G   EA RLQ  M  KG   D+  YN +  GLCKL   +EA  LL  MV  G  P+ ++
Sbjct: 417 SGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMS 476

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           +T++I    + G+    + +F  M  KG  P ++TY VLI  ++ RG ++ A     E++
Sbjct: 477 FTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELE 536

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
            +G+ P+V T  +LI+G C   ++D A  LF +M + G++PN  TYT +I+     G  +
Sbjct: 537 NRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSE 596

Query: 681 EALRLYKEMLDREIEPDYCTHSALL 705
           EA +LY EM +  + PD   +S+L+
Sbjct: 597 EAFKLYDEMKETGLTPDDTVYSSLV 621


>gi|356513749|ref|XP_003525573.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like [Glycine max]
          Length = 819

 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 169/644 (26%), Positives = 301/644 (46%), Gaps = 100/644 (15%)

Query: 165 GGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS 224
           G + +CVS+ + D             + +    +  R G+LPDV  CN +   L ++G  
Sbjct: 165 GFVKTCVSLNMFD-------------KAIDFLFQTRRRGILPDVLTCNFLFNRLVEHGEV 211

Query: 225 VKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGV----- 279
            KA  VY  +  FG  P+  TY  ++ + CK+G++++ L +  EM+  G  P+       
Sbjct: 212 DKALAVYEQLKRFGFIPNCYTYAIVIKALCKKGDLKQPLCVFEEMERVGVIPHSYCFAAY 271

Query: 280 ------------------------------TYNVLITGFSRNGELEQARGLIRDMLKLGL 309
                                          Y  ++ GF    +L++A+G+  DM + G+
Sbjct: 272 IEGLCNNHRSDLGYEVLQAFRKGNAPLEVYAYTAVVRGFCNEMKLDEAQGVFDDMERQGV 331

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA-------------------- 349
               + Y+ +I GY +   L+ AL L +EM++RGV                         
Sbjct: 332 VPDVYVYSSLIHGYCKSHNLLRALALHDEMISRGVKTNCVVVSCILHCLGEMGMTLEVVD 391

Query: 350 ---------------TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
                           YNI+   LC  G+V DA     EM  K +  D+  Y TL+ GYC
Sbjct: 392 QFKELKESGMFLDGVAYNIVFDALCMLGKVEDAVEMVEEMKSKRLGLDVKHYTTLINGYC 451

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
             G++  AF +F E++ + L P +VTYN L  GL R G      +L + M +QG+ P+  
Sbjct: 452 LQGDLVTAFNMFKEMKEKGLKPDIVTYNVLAAGLSRNGHARETVKLLDFMESQGMKPNST 511

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
           T+ +++ G C  G +  A  +FN +  K ++     Y+  + G  +     ++Y +  ++
Sbjct: 512 THKMIIEGLCSGGKVLEAEVYFNSLEDKNIE----IYSAMVNGYCETDLVKKSYEVFLKL 567

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
           L +G      +   L+  LC  G +E+A +LL +M+     P  I Y+ I+ A  + GD+
Sbjct: 568 LNQGDMAKKASCFKLLSKLCMTGDIEKAVKLLDRMLLSNVEPSKIMYSKILAALCQAGDM 627

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
           +  R LF+  + +G +P +VTYT++I+++     L+ A   F +M+ +GI+P+VIT+  L
Sbjct: 628 KNARTLFDVFVHRGFTPDVVTYTIMINSYCRMNCLQEAHDLFQDMKRRGIKPDVITFTVL 687

Query: 635 INGLCR-----------LRRIDQAY--GLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
           ++G  +            R+    Y   +  DME+  I P+   YT+L++ +    N+Q+
Sbjct: 688 LDGSLKEYLGKRFSSHGKRKTTSLYVSTILRDMEQMKINPDVVCYTVLMDGHMKTDNFQQ 747

Query: 682 ALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
           A+ L+ +M++  +EPD  T++AL+    ++ +   AV  L  ++
Sbjct: 748 AVSLFDKMIESGLEPDTITYTALVSGLCNRGHVEKAVTLLNEMS 791



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/476 (27%), Positives = 240/476 (50%), Gaps = 19/476 (3%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K   + + L + ++M+  G+  +    + I+  L + G +++  + ++ + E G+   
Sbjct: 345 YCKSHNLLRALALHDEMISRGVKTNCVVVSCILHCLGEMGMTLEVVDQFKELKESGMFLD 404

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            V YN + D+ C  G++++A+E++ EM+ +    +   Y  LI G+   G+L  A  + +
Sbjct: 405 GVAYNIVFDALCMLGKVEDAVEMVEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFK 464

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M + GLK    +YN +  G S  G   E + L + M ++G+ P   T+ ++I GLC  G
Sbjct: 465 EMKEKGLKPDIVTYNVLAAGLSRNGHARETVKLLDFMESQGMKPNSTTHKMIIEGLCSGG 524

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           +V +A   F  +  KN    I  Y+ ++ GYC +  + +++ +F +L ++  +    +  
Sbjct: 525 KVLEAEVYFNSLEDKN----IEIYSAMVNGYCETDLVKKSYEVFLKLLNQGDMAKKASCF 580

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            L+  LC  GD+E A +L + M+   + P  I Y+ ++   C+ G++  AR  F+  + +
Sbjct: 581 KLLSKLCMTGDIEKAVKLLDRMLLSNVEPSKIMYSKILAALCQAGDMKNARTLFDVFVHR 640

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV------------ 530
           G  PD   YT  I    ++    EA+ L ++M  +G  PD+IT+ VL+            
Sbjct: 641 GFTPDVVTYTIMINSYCRMNCLQEAHDLFQDMKRRGIKPDVITFTVLLDGSLKEYLGKRF 700

Query: 531 --HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
             HG  K  SL   + +LR M      PD + YT ++   ++  + ++   LF+ M+  G
Sbjct: 701 SSHGKRKTTSLY-VSTILRDMEQMKINPDVVCYTVLMDGHMKTDNFQQAVSLFDKMIESG 759

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRI 644
           L P  +TYT L+     RG +E A    +EM  KG+ P+V   +AL  G+ + R++
Sbjct: 760 LEPDTITYTALVSGLCNRGHVEKAVTLLNEMSSKGMTPDVHIISALKRGIIKARKV 815



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 95/218 (43%), Gaps = 35/218 (16%)

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
           L  +N  V     L   ++A + L +    G +PD +T   + +  +E G++ +   ++ 
Sbjct: 160 LRAFNGFVKTCVSLNMFDKAIDFLFQTRRRGILPDVLTCNFLFNRLVEHGEVDKALAVYE 219

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
            + R G  P   TY ++I A   +G L+     F EM+  G+ P+   + A I GLC   
Sbjct: 220 QLKRFGFIPNCYTYAIVIKALCKKGDLKQPLCVFEEMERVGVIPHSYCFAAYIEGLCNNH 279

Query: 643 R-----------------------------------IDQAYGLFIDMEEEGILPNKYTYT 667
           R                                   +D+A G+F DME +G++P+ Y Y+
Sbjct: 280 RSDLGYEVLQAFRKGNAPLEVYAYTAVVRGFCNEMKLDEAQGVFDDMERQGVVPDVYVYS 339

Query: 668 ILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            LI+  C + N   AL L+ EM+ R ++ +    S +L
Sbjct: 340 SLIHGYCKSHNLLRALALHDEMISRGVKTNCVVVSCIL 377


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 164/556 (29%), Positives = 261/556 (46%), Gaps = 46/556 (8%)

Query: 59  KELIISTVEEKPWAFCNNRWVSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQP 118
           + L I T+ E         W        V+ P   +  L        + LRFF+W + + 
Sbjct: 16  QSLSIPTISE---LLSKQHWSELKPHLRVTKPATFLDQLLNAGVDSELVLRFFKWSQKEY 72

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDV----LIGGGLSSCVSIK 174
            +         +L  L  S         +++ V    H +  V    L+ GG     ++ 
Sbjct: 73  RLSYGLEPTSKVLHFLANSKRYSKVRSFLDSFVKNEKHTVSSVFHSLLLDGGRPGATAL- 131

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRD-------------- 220
           I+D+L+L Y K   +      F +    G    + +CN ++  L                
Sbjct: 132 IIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEM 191

Query: 221 ---------NGFSV------------KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG-- 257
                    N F++            KA +    M  +GI P++VTYNT++D +CK G  
Sbjct: 192 IKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSA 251

Query: 258 -EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSY 316
            +M +A   + EM      PN VT+N LI GF ++  +  A+    +M K GLK +  +Y
Sbjct: 252 GKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTY 311

Query: 317 NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
           N +I G    G L EA++L ++MV  G+ P + TYN LI G CK   + +A   F ++ +
Sbjct: 312 NSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSK 371

Query: 377 KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
           + ++P++I++NT++  YC+ G + E F L   +    ++P V TYN LI GLCR  DL+ 
Sbjct: 372 QELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQA 431

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
           A++L   M N+G+  DV+TY I+++G CK      A +  NEM   GL+P+   Y T + 
Sbjct: 432 AKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMD 491

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
           G    G    A  ++  M  +   P+++TYNVL+ G CK+  LE AN LL +M+  G  P
Sbjct: 492 GYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNP 551

Query: 557 DHITYTSIIHASLEMG 572
           +  TY  +    LE G
Sbjct: 552 NRTTYDIVRLEMLEKG 567



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 142/453 (31%), Positives = 236/453 (52%), Gaps = 19/453 (4%)

Query: 252 SFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKV 311
           ++ K  E+  A E     +  G   +  + N L++   +  ++     + ++M+K  +  
Sbjct: 139 AYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHT 198

Query: 312 SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK---WGRVSDAR 368
           + +++N  I G    G L +A +  E+M   G++P + TYN L+ G CK    G++  A 
Sbjct: 199 NLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAE 258

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               EML   + P+ +++NTL+ G+C+  N+  A   F+E++ + L P +VTYN+LI+GL
Sbjct: 259 AFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGL 318

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C  G LE A  L + M+  G+ P+++TY  ++NG CK   +  A + F+++ ++ L P+ 
Sbjct: 319 CNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNV 378

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             + T I    K G   E + L   ML +G  P++ TYN L+ GLC+   L+ A ELL +
Sbjct: 379 ITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNE 438

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M   G   D +TY  +I    +    R    L N M   GL P  VTY  L+  +   G+
Sbjct: 439 MENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGK 498

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           L+ A    + M+ +  +PNV+TYN LI G C++ +++ A GL  +M E+G+ PN+ TY I
Sbjct: 499 LKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDI 558

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
                         +RL  EML++   PD   H
Sbjct: 559 --------------VRL--EMLEKGFSPDIEGH 575



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 143/473 (30%), Positives = 243/473 (51%), Gaps = 10/473 (2%)

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY--NVLITGFSRNGELEQARGLIRDML 305
           + LDSF K  E      +   +   G  P       ++L+  + +N EL  A        
Sbjct: 99  SFLDSFVK-NEKHTVSSVFHSLLLDGGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAK 157

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
             G K+S  S NP++    ++  + +   + +EM+ R +   L T+NI I GLC+ G+++
Sbjct: 158 DYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLN 217

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG-----EAFLLFDELRSRNLVPTVVT 420
            A     +M    + P++++YNTL+ GYC+ G+ G     EAF+   E+ +  + P  VT
Sbjct: 218 KAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFM--KEMLANKICPNEVT 275

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           +NTLIDG C+  ++  A++  E M  QG+ P+++TY  ++NG C  G L  A + +++M+
Sbjct: 276 FNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMV 335

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
             GL+P+   Y   I G  K     EA ++ +++  +   P++IT+N ++   CK G +E
Sbjct: 336 GLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMME 395

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           E   L   M+ +G +P+  TY  +I       DL+  ++L N M  KGL   +VTY +LI
Sbjct: 396 EGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILI 455

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                  +   A    +EM   G++PN +TYN L++G C   ++  A  +   ME+E   
Sbjct: 456 DGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQ 515

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDY 713
           PN  TY +LI   C     + A  L  EML++ + P+  T+  + L+ L+K +
Sbjct: 516 PNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEMLEKGF 568



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 112/326 (34%), Positives = 179/326 (54%), Gaps = 16/326 (4%)

Query: 198 KMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG 257
           +ML N + P+    N +I     +     A++ +  M + G+KP+IVTYN++++  C  G
Sbjct: 263 EMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNG 322

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
           +++EA++L  +M G G  PN VTYN LI GF +   +++A  +  D+ K  L  +  ++N
Sbjct: 323 KLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFN 382

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            +I  Y ++G++ E  +L   M+  G+ P ++TYN LI GLC+   +  A+    EM  K
Sbjct: 383 TMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENK 442

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
            +  D+++YN L+ G C++     A  L +E+ +  L P  VTYNTL+DG C  G L+ A
Sbjct: 443 GLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAA 502

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
             ++  M  +   P+V+TY +++ G CK+  L  A    NEML KGL P+R  Y      
Sbjct: 503 LNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTY------ 556

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDL 523
                   +  RL  EML KGF PD+
Sbjct: 557 --------DIVRL--EMLEKGFSPDI 572


>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
          Length = 662

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 152/514 (29%), Positives = 259/514 (50%), Gaps = 23/514 (4%)

Query: 220 DNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGV 279
           D GF + A E++R     G++P++VTYN ++D+ CK G ++EA  L   M+  G +P+ V
Sbjct: 28  DAGFEMLA-ELWRA----GLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVV 82

Query: 280 TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
           T+ +LI G +R     +   ++++M +LG+  +   YN +I  +  KG   +AL L +EM
Sbjct: 83  TFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEM 142

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL-YGYCRSGN 398
           V + + PT  TYN++   LCK G +  A     +ML   +      +NT++ +   R+  
Sbjct: 143 VLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRR 202

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD-----------------LEVAQQLK 441
           +     + +E+ +R + P        +  LC+ G                  ++ A ++ 
Sbjct: 203 LESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGKYMKEATKVI 262

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
           + M+N+GI  D ITY IM+ G CK   +  A +   +M R+G +PD F + T +     L
Sbjct: 263 QTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNL 322

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
           G   E + L ++M  +G  PD+++Y  ++ G CK   + +A E L +++  G  P+   Y
Sbjct: 323 GKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIY 382

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
            ++I      GD+    D    M   G+ PT VTY  L++     G +E A   FS+ + 
Sbjct: 383 NALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARE 442

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
             +   VI Y  +I G C+L ++ +A   F +M   GI PNK TYT L+     +GN +E
Sbjct: 443 NNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEE 502

Query: 682 ALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKV 715
           A +L+ EM+   + PD  T+  L+ +  +K  K 
Sbjct: 503 ASKLFDEMVGSGVIPDNITYGTLIARCSEKGGKT 536



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 139/507 (27%), Positives = 234/507 (46%), Gaps = 59/507 (11%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF---GIKP 241
           K   V+    +  ++ R GL P V   N ++  L  +G   +  E +R+ G     G+ P
Sbjct: 23  KAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSG---RVEEAFRLKGRMEQGGMTP 79

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI---------------- 285
           S+VT+  +++   +     E   +L EM+  G SPN V YN LI                
Sbjct: 80  SVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLF 139

Query: 286 -------------------TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEK 326
                                  + GE+E+A  ++ DML +G+ V    +N ++    ++
Sbjct: 140 DEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQR 199

Query: 327 GLLVEA-LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE------------ 373
              +E+ +++  EMVTRG+ P        +  LCK G+  +A   +F+            
Sbjct: 200 TRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGKYMKEAT 259

Query: 374 -----MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
                ML K +  D I+YN ++ G C+   + EA  L  ++  R   P + T+NTL+   
Sbjct: 260 KVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAY 319

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C  G +E    L + M  +G+ PD+++Y  +++G CK  ++  A+E+  E++ +GL+P+ 
Sbjct: 320 CNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNV 379

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
           F Y   I G  + GD S A    E M + G  P  +TY  L++ +C  G +EEA  +  +
Sbjct: 380 FIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQ 439

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
              +      I YT +I    ++G +      F  M  +G+SP  +TYT L++A++  G 
Sbjct: 440 ARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGN 499

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALI 635
            E A   F EM   G+ P+ ITY  LI
Sbjct: 500 SEEASKLFDEMVGSGVIPDNITYGTLI 526



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 131/473 (27%), Positives = 228/473 (48%), Gaps = 18/473 (3%)

Query: 270 QGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLL 329
           + R  + N  +Y  +I    + G+++    ++ ++ + GL+ +  +YN ++    + G +
Sbjct: 3   ESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRV 62

Query: 330 VEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTL 389
            EA  L+  M   G+ P++ T+ ILI GL +  R  +      EM +  V P+ + YN L
Sbjct: 63  EEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNEL 122

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
           +  +CR G+  +A  LFDE+  + + PT VTYN +   LC+ G++E A+++ E+M++ G+
Sbjct: 123 IGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGM 182

Query: 450 LPDVITYTIMVNGSC-KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD----- 503
                 +  +V     +   L       NEM+ +G++P+    T  +    K G      
Sbjct: 183 TVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAV 242

Query: 504 ------------TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
                         EA ++ + ML KG   D ITYN+++ G CK   +EEA +L   M  
Sbjct: 243 GIWFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTR 302

Query: 552 DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLEL 611
            GF PD  T+ +++HA   +G +     L + M  +GL P +V+Y  +I  H     +  
Sbjct: 303 RGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRK 362

Query: 612 AFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
           A  Y +E+  +G++PNV  YNALI G  R   I  A      M+  GI P   TY  L+ 
Sbjct: 363 AKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMY 422

Query: 672 ENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
             C+AG  +EA  ++ +  +  ++     ++ ++         V AV Y E +
Sbjct: 423 WMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEM 475



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 128/432 (29%), Positives = 200/432 (46%), Gaps = 53/432 (12%)

Query: 194 LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
           +V  +M + G+ P+    N +I      G   +A  ++  M    +KP+ VTYN +  + 
Sbjct: 102 IVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKAL 161

Query: 254 CKEGEMQEALELL--------------------W----------------EMQGRGCSPN 277
           CKEGEM+ A  +L                    W                EM  RG  PN
Sbjct: 162 CKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPN 221

Query: 278 GVTYNVLITGFSRNGELEQARGL-----------------IRDMLKLGLKVSAHSYNPII 320
                  +    + G+ ++A G+                 I+ ML  G+++ + +YN +I
Sbjct: 222 DPLMTACMRELCKGGKHQEAVGIWFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMI 281

Query: 321 CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
            G  +   + EA+ L  +M  RG  P L T+N L++  C  G++ +  H   +M  + + 
Sbjct: 282 RGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQ 341

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           PDI+SY T++ G+C++ +I +A     EL  R L P V  YN LI G  R GD+  A   
Sbjct: 342 PDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDA 401

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
            E M + GI P  +TY  ++   C  G +  A+  F++     +      YT  I G  K
Sbjct: 402 VETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCK 461

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
           LG   EA    EEM ++G  P+ +TY  L++   K G+ EEA++L  +MVG G IPD+IT
Sbjct: 462 LGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNIT 521

Query: 561 YTSIIHASLEMG 572
           Y ++I    E G
Sbjct: 522 YGTLIARCSEKG 533



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 176/366 (48%), Gaps = 19/366 (5%)

Query: 160 DVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPD---VKNCNRII- 215
           D+L  G    C     +   LL  T++  +E  + + N+M+  G+ P+   +  C R + 
Sbjct: 176 DMLSIGMTVHCGLFNTVVAWLLQRTRR--LESVVSITNEMVTRGMRPNDPLMTACMRELC 233

Query: 216 -------------KVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
                        K L    +  +A +V + M   GI+   +TYN M+   CK+ +M+EA
Sbjct: 234 KGGKHQEAVGIWFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEA 293

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
           ++L  +M  RG  P+  T+N L+  +   G++E+   L+  M   GL+    SY  II G
Sbjct: 294 IKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDG 353

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
           + +   + +A     E++ RG+ P +  YN LI G  + G +S A      M    + P 
Sbjct: 354 HCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPT 413

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
            ++Y +L+Y  C +G + EA  +F + R  N+   V+ Y  +I G C+ G +  A    E
Sbjct: 414 NVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFE 473

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            M ++GI P+ +TYT ++    K GN   A + F+EM+  G+ PD   Y T IA   + G
Sbjct: 474 EMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEKG 533

Query: 503 DTSEAY 508
             +  Y
Sbjct: 534 GKTTQY 539



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 114/275 (41%), Gaps = 49/275 (17%)

Query: 116 TQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKI 175
           T+ G K D F F T+L                                            
Sbjct: 301 TRRGFKPDLFTFNTLLH------------------------------------------- 317

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
                  Y     +E+   + ++M   GL PD+ +   II          KA+E    + 
Sbjct: 318 ------AYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELM 371

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
           + G+KP++  YN ++  + + G++  A++ +  M+  G  P  VTY  L+      G +E
Sbjct: 372 DRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVE 431

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
           +A+ +     +  + +    Y  +I GY + G +VEA+   EEM +RG++P   TY  L+
Sbjct: 432 EAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLM 491

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
           Y   K G   +A   F EM+   VIPD I+Y TL+
Sbjct: 492 YAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLI 526


>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
 gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
          Length = 695

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 163/528 (30%), Positives = 259/528 (49%), Gaps = 5/528 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K   V + + VF +M   G  PD+ N N ++  L       +ARE++R M   G KP 
Sbjct: 89  FCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPD 148

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +VTYNTM+   CK  ++ EA+ LL  M+    SP  VTY  LI    +   L+QA  +  
Sbjct: 149 VVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFE 208

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW- 361
            M +     +  +Y+ +       G LVEA  +  +M  + V  T  TY++++ GL K  
Sbjct: 209 KMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMD 268

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           G   +A     EM+ K + PD  +Y+ L+ G C++   GEA  +F E+R R + PTVVTY
Sbjct: 269 GGNVEAAKLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTY 328

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           NTL++GL     L+ A +L   M++QG LPD  +Y +M+ G C  G+ + A   F +M++
Sbjct: 329 NTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIK 388

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAY----RLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            G+  + + Y   I G +K    S A+    R+Q     K   P++ TY +L+  LCK  
Sbjct: 389 DGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTD 448

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            +EEA +LL  M   GF+P    +  ++      G L    +L+  M R      + +  
Sbjct: 449 QVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSN 508

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           +L+     RG ++ A  +  +M   GI P+  TY+ L+ GLC   + DQA  L  ++  +
Sbjct: 509 ILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRD 568

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           G  P       L+   C  G++Q A   Y  +    +E     H+ L+
Sbjct: 569 GKRPENQGLRQLLGALCAQGDFQGAYEFYCWLPSVGVEVTLGMHNTLV 616



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 148/548 (27%), Positives = 256/548 (46%), Gaps = 76/548 (13%)

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M E G+ P+ + YN ++   CK G + EA   L  M  + C+PN V+YN++I G+ +   
Sbjct: 1   MLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMP-QHCAPNVVSYNIIIDGYCKARN 59

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           +E+A   +R+M +LG   + H+Y+ I+  + + G + +A+++  EM  +G  P +  +N+
Sbjct: 60  IEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNV 119

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           L+ GL +  ++ +AR  F  M  +   PD+++YNT++ G C+   + EA  L + ++  +
Sbjct: 120 LLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQED 179

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           + PT VTY TLID LC++  L+ A ++ E M           Y+++ N   + G L  A 
Sbjct: 180 VSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEAS 239

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKL-GDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
             +++M RK +      Y+  + G  K+ G   EA +L  EM+ K   PD   Y++L++G
Sbjct: 240 RVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILING 299

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           LCK     EA E+ ++M G G  P  +TY +++   L    L+   +L   ML +G  P 
Sbjct: 300 LCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPD 359

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGI---------------------------- 624
             +Y ++I    A G    A+  F +M   GI                            
Sbjct: 360 TCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFK 419

Query: 625 -----------RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
                       PN+ TY  LI+ LC+  ++++A+ L   M ++G +P+   + +L++  
Sbjct: 420 RMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRL 479

Query: 674 CNAGNWQEALRLYKEM-----------------------------------LDREIEPDY 698
             AG   +A  LYKEM                                    D  I PD 
Sbjct: 480 ARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDK 539

Query: 699 CTHSALLL 706
            T+  L++
Sbjct: 540 FTYDKLVV 547



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 146/497 (29%), Positives = 246/497 (49%), Gaps = 8/497 (1%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           ML  GL P+    N +I  L   G   +A    + M +    P++V+YN ++D +CK   
Sbjct: 1   MLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARN 59

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           +++AL  L EM+  G  P    Y+ ++  F + G + +A  +  +M   G +    ++N 
Sbjct: 60  IEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNV 119

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           ++ G      + EA  L   M +RG  P + TYN +I GLCKW ++ +A      M +++
Sbjct: 120 LLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQED 179

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
           V P  ++Y TL+   C+   + +A+ +F+++       T   Y+ L + L R G L  A 
Sbjct: 180 VSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEAS 239

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKM--GNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
           ++  +M  + +     TY+++V G  KM  GN+  A+    EM+ K + PD +AY+  I 
Sbjct: 240 RVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAK-LVTEMMGKKIAPDFYAYSILIN 298

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
           G  K     EA  + +EM  +G  P ++TYN L+ GL     L++A EL   M+  G +P
Sbjct: 299 GLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLP 358

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
           D  +Y  +I      GD      LF +M++ G+     TY  +I           A+M F
Sbjct: 359 DTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLF 418

Query: 617 SEMQV----KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
             MQ     K   PN+ TY  LI+ LC+  ++++A+ L   M ++G +P+   + +L++ 
Sbjct: 419 KRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSR 478

Query: 673 NCNAGNWQEALRLYKEM 689
              AG   +A  LYKEM
Sbjct: 479 LARAGRLDDAFELYKEM 495



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 175/350 (50%), Gaps = 5/350 (1%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           VE   LV  +M+   + PD    + +I  L       +A+E+++ M   GI P++VTYNT
Sbjct: 272 VEAAKLV-TEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNT 330

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +L+      ++Q+A+EL + M  +G  P+  +YN++I GF  NG+  +A  L +DM+K G
Sbjct: 331 LLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDG 390

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT----RGVAPTLATYNILIYGLCKWGRV 364
           + ++  +YN +I G+ +      A  L + M +    +  AP + TY ILI  LCK  +V
Sbjct: 391 IVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQV 450

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            +A      M  K  +P +  +  LL    R+G + +AF L+ E+   N    V + N L
Sbjct: 451 EEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNIL 510

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           +DG+ R G ++ A+   + M + GI+PD  TY  +V G C  G    AR+   E++R G 
Sbjct: 511 LDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDGK 570

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
           +P+       +      GD   AY     + + G    L  +N LV   C
Sbjct: 571 RPENQGLRQLLGALCAQGDFQGAYEFYCWLPSVGVEVTLGMHNTLVTSCC 620



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 130/268 (48%), Gaps = 8/268 (2%)

Query: 195 VFNKMLRNGLLPDVKNCN-RIIKVLRDNGFSVKAREVYRMMGEFGIK---PSIVTYNTML 250
           +F  M+++G++ +    N  I+  ++D  +S       RM      K   P++ TY  ++
Sbjct: 382 LFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILI 441

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
            S CK  +++EA +LL  M+ +G  P+   + VL++  +R G L+ A  L ++M ++  +
Sbjct: 442 SSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQ 501

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
               S N ++ G   +G + EA +  ++M   G+ P   TY+ L+ GLC  G+   AR  
Sbjct: 502 QLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKL 561

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
             E++R    P+      LL   C  G+   A+  +  L S  +  T+  +NTL+   C 
Sbjct: 562 VEELVRDGKRPENQGLRQLLGALCAQGDFQGAYEFYCWLPSVGVEVTLGMHNTLVTSCCL 621

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTI 458
              L+    +++    +G+ PDVI   I
Sbjct: 622 ARKLDYLDMIEQ---REGV-PDVIVERI 645


>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
          Length = 524

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 156/437 (35%), Positives = 226/437 (51%), Gaps = 58/437 (13%)

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
           LSS  S     L   IY  +  +  C   FN MLR+               L   G  V+
Sbjct: 92  LSSLPSAPAFALFADIYRLR--LPLCTTTFNIMLRH---------------LCATGKPVR 134

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG-CSPNGVTYNVLI 285
           A E+ R M     +P+ VTYNT++  FC  G +Q ALE++ EM+ RG  +P+  TY  LI
Sbjct: 135 ALELLRQMP----RPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLI 190

Query: 286 TGFSRNGELEQARGLIRDMLKLG-LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           +G+ + G +E A  +  +ML  G +  SA  YN +I GY + G L  AL   E+MV RG+
Sbjct: 191 SGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGI 250

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
           A T+ATYN+L++ L    R SDA     EM +    PD+ +YN L+ GYC+ GN  +A  
Sbjct: 251 AMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALE 310

Query: 405 LFDELRSRN-----------------------------------LVPTVVTYNTLIDGLC 429
           +F+E+  +                                    + P VV YN LI+  C
Sbjct: 311 VFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHC 370

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
             GD+E A ++   M  + I PD +TY  ++ G C +G L  AR   +EM ++G+QPD  
Sbjct: 371 TGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLV 430

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
           +Y T I+G    GD  +A R+++EM+ KGF P L+TYN L+ GLCK+   ++A  L+++M
Sbjct: 431 SYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEM 490

Query: 550 VGDGFIPDHITYTSIIH 566
           V  G  PD  TY S+I 
Sbjct: 491 VAKGITPDDSTYISLIE 507



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 150/429 (34%), Positives = 208/429 (48%), Gaps = 41/429 (9%)

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
            T+N ML   C  G+   ALELL +M      PN VTYN                     
Sbjct: 117 TTFNIMLRHLCATGKPVRALELLRQMP----RPNAVTYNT-------------------- 152

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG-VAPTLATYNILIYGLCKWG 362
                          +I G+  +G +  AL +  EM  RG +AP   TY  LI G CK G
Sbjct: 153 ---------------VIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIG 197

Query: 363 RVSDARHRFFEMLRKN-VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           R+ DA   F EML K  V P  + YN L+ GYC  G +  A    +++  R +  TV TY
Sbjct: 198 RMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATY 257

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           N L+  L        A  + E M   G  PDV TY I++NG CK GN   A E F EM +
Sbjct: 258 NLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQ 317

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
           KG++     YT+ I    + G   E  RL    + KG  PD++ YN L++  C  G +E 
Sbjct: 318 KGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMER 377

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A E++ +M      PD +TY +++     +G L   R L + M ++G+ P LV+Y  LI 
Sbjct: 378 AYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLIS 437

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
            ++ +G ++ A     EM  KG  P ++TYNALI GLC++R+ D A  L  +M  +GI P
Sbjct: 438 GYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITP 497

Query: 662 NKYTYTILI 670
           +  TY  LI
Sbjct: 498 DDSTYISLI 506



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 132/411 (32%), Positives = 204/411 (49%), Gaps = 6/411 (1%)

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  L  D+ +L L +   ++N ++      G  V AL L  +M      P   TYN +I 
Sbjct: 100 AFALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNTVIA 155

Query: 357 GLCKWGRVSDARHRFFEML-RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN-L 414
           G C  GRV  A     EM  R  + PD  +Y TL+ G+C+ G + +A  +FDE+ ++  +
Sbjct: 156 GFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEV 215

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P+ V YN LI G C  G L+VA Q +E+M+ +GI   V TY ++++        S A  
Sbjct: 216 APSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYA 275

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
              EM + G  PD F Y   I G  K G+  +A  + EEM  KG     +TY  L++   
Sbjct: 276 VLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFS 335

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           + G ++E + L    V  G  PD + Y ++I++    GD+ R  ++   M +K + P  +
Sbjct: 336 RKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDM 395

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           TY  L+      GRL+ A     EM  +GI+P++++YN LI+G      I  A  +  +M
Sbjct: 396 TYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEM 455

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            ++G  P   TY  LI   C      +A  L KEM+ + I PD  T+ +L+
Sbjct: 456 MDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLI 506



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 134/239 (56%), Gaps = 2/239 (0%)

Query: 154 NMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNR 213
           + + +L+ +   G S    +   ++L+  Y K+   ++ L VF +M + G+         
Sbjct: 272 DAYAVLEEMQKNGFSP--DVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTS 329

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
           +I V    G   +   ++ +  + GI+P +V YN +++S C  G+M+ A E++ EM+ + 
Sbjct: 330 LIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKR 389

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
             P+ +TYN L+ GF   G L++AR LI +M K G++    SYN +I GYS KG + +AL
Sbjct: 390 IPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDAL 449

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
            + +EM+ +G  PTL TYN LI GLCK  +  DA +   EM+ K + PD  +Y +L+ G
Sbjct: 450 RVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEG 508



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 166/352 (47%), Gaps = 26/352 (7%)

Query: 101 REKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVC---VNMHG 157
           R + + AL   R +  + G+  D++ + T++    + G +  A  V + ++    V    
Sbjct: 160 RGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSA 219

Query: 158 IL-DVLIGG--------------------GLSSCVSIKILDLLLLIYTKKSMVEQCLLVF 196
           ++ + LIGG                    G++  +++   +LL+      +       V 
Sbjct: 220 VMYNALIGGYCDVGKLDVALQYREDMVQRGIA--MTVATYNLLMHALFMDARASDAYAVL 277

Query: 197 NKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKE 256
            +M +NG  PDV   N +I      G   KA EV+  M + G++ + VTY +++  F ++
Sbjct: 278 EEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRK 337

Query: 257 GEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSY 316
           G++QE   L      +G  P+ V YN LI      G++E+A  ++ +M K  +     +Y
Sbjct: 338 GQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTY 397

Query: 317 NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
           N ++ G+   G L EA  L +EM  RG+ P L +YN LI G    G + DA     EM+ 
Sbjct: 398 NTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMD 457

Query: 377 KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
           K   P +++YN L+ G C+     +A  L  E+ ++ + P   TY +LI+GL
Sbjct: 458 KGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGL 509



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 111/239 (46%), Gaps = 41/239 (17%)

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
           ++ A+ L  ++     P    T+N+++  LC  G    A ELLR+M      P+ +TY +
Sbjct: 97  SAPAFALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNT 152

Query: 564 IIHASLEMGDLRRGRDLFNNML-RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
           +I      G ++   ++   M  R G++P   TY  LI      GR+E A   F EM  K
Sbjct: 153 VIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTK 212

Query: 623 G-IRPNVITYNALINGLCRLRRIDQA-----------------------YGLFID----- 653
           G + P+ + YNALI G C + ++D A                       + LF+D     
Sbjct: 213 GEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASD 272

Query: 654 -------MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
                  M++ G  P+ +TY ILIN  C  GN ++AL +++EM  + +     T+++L+
Sbjct: 273 AYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLI 331



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 53/105 (50%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +++   + ++M + G+ PD+ + N +I      G    A  V   M + G  P+++TYN 
Sbjct: 410 LDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNA 469

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           ++   CK  +  +A  L+ EM  +G +P+  TY  LI G +   E
Sbjct: 470 LIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGLTTEDE 514


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 165/566 (29%), Positives = 285/566 (50%), Gaps = 38/566 (6%)

Query: 177  DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
            ++++  Y+K   V++ + + ++M+RNG  PDV   N +I  L   G   +A +++  M +
Sbjct: 511  NMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKD 570

Query: 237  FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
              + P++VTYNT+L    KEG +Q+A+EL   M  + CSPN +++N L+  F +N E+E 
Sbjct: 571  MKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVEL 630

Query: 297  ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
            A  +   M  +  K    +YN +I G  ++  +  A     ++  + + P   T   L+ 
Sbjct: 631  ALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQL-KKSMHPDHVTICTLLP 689

Query: 357  GLCKWGRVSDA-----------RHR----FFEMLRKNVIPD-------IISYNTLLYGYC 394
            GL K G++ DA           R R    F+E L    + +       I +   +L G C
Sbjct: 690  GLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGIC 749

Query: 395  RSGNIG--------------EAFLLFDELRSR-NLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
            R  +                 A+ +FD+   +  + PT+ +YN LI  L      E A  
Sbjct: 750  REDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWD 809

Query: 440  LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
            L ++M N G  PD  T+ +++    K G ++   E + EM+ +  +PD   Y   I+   
Sbjct: 810  LFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLA 869

Query: 500  KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
            K  +  +A     ++++  F P   TY  L+ GL K+G LEEA  L  +M   G  P+  
Sbjct: 870  KSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCA 929

Query: 560  TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
             +  +I+   ++GD      LF  M+ +G+ P L +YT+L+      GR++ A  YF+E+
Sbjct: 930  IFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNEL 989

Query: 620  QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
            +  G+ P+ I YN +INGL + +R+++A  L+ +M   GI+P+ YTY  L+     AG  
Sbjct: 990  KSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMV 1049

Query: 680  QEALRLYKEMLDREIEPDYCTHSALL 705
            ++A R+Y+E+    +EPD  T++AL+
Sbjct: 1050 EQAKRMYEELQLAGLEPDVFTYNALI 1075



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 156/553 (28%), Positives = 262/553 (47%), Gaps = 39/553 (7%)

Query: 176 LDLLLLIYTKKSM---VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR 232
           LD  L I+   S+   + Q   V NKM + G + +  + N +I +L  +GF  +A EVYR
Sbjct: 157 LDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYR 216

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKE-----------------------------------G 257
            M   G+KPS+ TY+ ++ +  K+                                   G
Sbjct: 217 RMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAG 276

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
           ++ EA E+   M   GC P+ VTY VLI      G+LE A+ L   M   G K     Y 
Sbjct: 277 KIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYI 336

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            ++  +++ G L        +M   G  P + T+ IL+  LCK     +A   F  M ++
Sbjct: 337 TLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQ 396

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
            ++P++ +YNTL+ G  R+G I +A  L D + S  + PT  TY T ID   + G+   A
Sbjct: 397 GILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKA 456

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
            +  E M  +GI+P+++     +    +MG L  A+  FN +   GL PD   Y   +  
Sbjct: 457 VETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKC 516

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
             K+G   EA  L  EM+  G  PD+I  N L+  L K G ++EA ++  +M      P 
Sbjct: 517 YSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPT 576

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
            +TY +++    + G +++  +LF +M+ K  SP  +++  L+        +ELA   FS
Sbjct: 577 VVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFS 636

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
           +M V   +P+V+TYN +I GL +  +++ A+  F  + ++ + P+  T   L+      G
Sbjct: 637 KMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQL-KKSMHPDHVTICTLLPGLVKCG 695

Query: 678 NWQEALRLYKEML 690
              +A+ + ++ +
Sbjct: 696 QIGDAISIARDFM 708



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 141/502 (28%), Positives = 255/502 (50%)

Query: 204 LLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEAL 263
           +L   + CN +++ LR +        V+  M +  I+  + TY T+  +    G +++  
Sbjct: 118 VLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMT 177

Query: 264 ELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGY 323
            +L +M+  G   N  +YN LI    ++G   +A  + R M+  GLK S  +Y+ ++   
Sbjct: 178 TVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVAL 237

Query: 324 SEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
            +K      + L +EM   G+ P + T+ I I  L + G++ +A   F  M  +   PD+
Sbjct: 238 GKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDL 297

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
           ++Y  L+   C +G +  A  LF ++++    P  V Y TL+D    +GDL+  ++    
Sbjct: 298 VTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQ 357

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           M   G +PDV+T+TI+V+  CK  +   A   F+ M ++G+ P+   Y T I G L+ G 
Sbjct: 358 MEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGR 417

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
             +A +L + M + G  P   TY   +    K G   +A E   KM   G +P+ +   +
Sbjct: 418 IEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNA 477

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
            +++  EMG LR  + +FN +   GL+P  VTY +++  ++  G+++ A    SEM   G
Sbjct: 478 SLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNG 537

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
             P+VI  N+LI+ L +  R+D+A+ +F  M++  + P   TY  L++     G  Q+A+
Sbjct: 538 CEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAI 597

Query: 684 RLYKEMLDREIEPDYCTHSALL 705
            L++ M+ ++  P+  + + LL
Sbjct: 598 ELFESMIXKKCSPNTISFNTLL 619



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 145/536 (27%), Positives = 257/536 (47%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           VE    VF  M +  +  D+     I K L   G   +   V   M + G   +  +YN 
Sbjct: 138 VEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNG 197

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++    + G   EALE+   M   G  P+  TY+ L+    +  + E    L+++M  LG
Sbjct: 198 LIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLG 257

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           L+ + +++   I      G + EA  +   M   G  P L TY +LI  LC  G++ +A+
Sbjct: 258 LRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAK 317

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F +M      PD + Y TLL  +   G++      + ++ +   +P VVT+  L+D L
Sbjct: 318 ELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVL 377

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+  D + A    + M  QGILP++ TY  ++ G  + G +  A +  + M   G+QP  
Sbjct: 378 CKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTA 437

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
           + Y T I    K G+T +A    E+M AKG  P+++  N  ++ L ++G L EA  +   
Sbjct: 438 YTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNG 497

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           +  +G  PD +TY  ++    ++G +    +L + M+R G  P ++    LI +    GR
Sbjct: 498 LRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGR 557

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           ++ A+  F  M+   + P V+TYN L++GL +  R+ +A  LF  M  +   PN  ++  
Sbjct: 558 VDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNT 617

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           L++  C     + AL+++ +M   + +PD  T++ ++   + ++   HA  +   L
Sbjct: 618 LLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQL 673



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 143/561 (25%), Positives = 266/561 (47%), Gaps = 14/561 (2%)

Query: 100 IREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAY-------WVVETVVC 152
           IR      L  F+ +  + G+++      T+L  + ++G + +AY        ++++  C
Sbjct: 153 IRRDLDTYLTIFKALSIRGGLRQ----MTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFC 208

Query: 153 VNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCN 212
                +   ++  GL    S+K    L++   KK   E  +++  +M   GL P+V    
Sbjct: 209 GEALEVYRRMVSEGLKP--SLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFT 266

Query: 213 RIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR 272
             I+VL   G   +A E++R M + G  P +VTY  ++D+ C  G+++ A EL  +M+  
Sbjct: 267 ICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKAN 326

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA 332
           G  P+ V Y  L+  F+  G+L+  +     M   G      ++  ++    +     EA
Sbjct: 327 GHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEA 386

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
               + M  +G+ P L TYN LI GL + GR+ DA      M    V P   +Y T +  
Sbjct: 387 FATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDY 446

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
           + +SG  G+A   F++++++ +VP +V  N  +  L   G L  A+ +   +   G+ PD
Sbjct: 447 FGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPD 506

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
            +TY +M+    K+G +  A    +EM+R G +PD     + I    K G   EA+++ +
Sbjct: 507 SVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFD 566

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
            M      P ++TYN L+ GL K G +++A EL   M+     P+ I++ +++    +  
Sbjct: 567 RMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKND 626

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
           ++     +F+ M      P ++TY  +I+      ++  AF +F +++ K + P+ +T  
Sbjct: 627 EVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK-KSMHPDHVTIC 685

Query: 633 ALINGLCRLRRIDQAYGLFID 653
            L+ GL +  +I  A  +  D
Sbjct: 686 TLLPGLVKCGQIGDAISIARD 706



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 107/336 (31%), Positives = 175/336 (52%), Gaps = 1/336 (0%)

Query: 195  VFNKMLRN-GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
            +F+K  +  G+ P + + N +I  L +  ++ KA ++++ M   G  P   T+N +L   
Sbjct: 774  IFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVH 833

Query: 254  CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
             K G++ E  EL  EM  R C P+ +TYN++I+  +++  L++A     D++    + + 
Sbjct: 834  GKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTP 893

Query: 314  HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
             +Y P+I G ++ G L EA+ L EEM   G  P  A +NILI G  K G    A   F  
Sbjct: 894  RTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKR 953

Query: 374  MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
            M+ + + PD+ SY  L+   C +G + EA   F+EL+S  L P  + YN +I+GL +   
Sbjct: 954  MVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQR 1013

Query: 434  LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
            +E A  L   M N+GI+PD+ TY  ++      G +  A+  + E+   GL+PD F Y  
Sbjct: 1014 MEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNA 1073

Query: 494  QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             I G     +   AY + + M+  G  P++ TY  L
Sbjct: 1074 LIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 145/288 (50%)

Query: 176  LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
             ++LL ++ K   + +   ++ +M+     PD    N +I  L  +    KA + +  + 
Sbjct: 826  FNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLV 885

Query: 236  EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
                +P+  TY  ++D   K G ++EA+ L  EM   GC PN   +N+LI G+ + G+ E
Sbjct: 886  SSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTE 945

Query: 296  QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
             A  L + M+  G++    SY  ++      G + EAL    E+ + G+ P    YN +I
Sbjct: 946  TACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRII 1005

Query: 356  YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
             GL K  R+ +A   + EM  + ++PD+ +YN+L+     +G + +A  +++EL+   L 
Sbjct: 1006 NGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLE 1065

Query: 416  PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
            P V TYN LI G     + E A  + +NM+  G  P++ TY  + N S
Sbjct: 1066 PDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPNQS 1113



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 145/325 (44%), Gaps = 39/325 (12%)

Query: 416 PTVV----TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           PTV+    T N +++ L  +  +E    + E M  + I  D+ TY  +       G L  
Sbjct: 116 PTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQ 175

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
                N+M + G   + ++Y   I   ++ G   EA  +   M+++G  P L TY+ L+ 
Sbjct: 176 MTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMV 235

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
            L K    E    LL++M   G  P+  T+T  I      G +    ++F  M  +G  P
Sbjct: 236 ALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGP 295

Query: 592 TLVTYTVLIHAHAARGRLELA---FM--------------------------------YF 616
            LVTYTVLI A    G+LE A   F+                                ++
Sbjct: 296 DLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFW 355

Query: 617 SEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNA 676
           S+M+  G  P+V+T+  L++ LC+ R  D+A+  F  M ++GILPN +TY  LI     A
Sbjct: 356 SQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRA 415

Query: 677 GNWQEALRLYKEMLDREIEPDYCTH 701
           G  ++AL+L   M    ++P   T+
Sbjct: 416 GRIEDALKLLDTMESVGVQPTAYTY 440



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 86/177 (48%)

Query: 175  ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
            I ++L+  Y K    E    +F +M+  G+ PD+K+   ++  L   G   +A   +  +
Sbjct: 930  IFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNEL 989

Query: 235  GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
               G+ P  + YN +++   K   M+EAL L  EM+ RG  P+  TYN L+      G +
Sbjct: 990  KSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMV 1049

Query: 295  EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
            EQA+ +  ++   GL+    +YN +I GYS       A  + + M+  G  P + TY
Sbjct: 1050 EQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTY 1106


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 165/605 (27%), Positives = 277/605 (45%), Gaps = 71/605 (11%)

Query: 171 VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV 230
           VS+ +   ++ ++ ++  ++  L + ++M  N L  D+   N  I      G    A + 
Sbjct: 231 VSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKF 290

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
           +  +   G+ P  VTY +M+   CK   + EA+E+  +M+     P    YN +I G+  
Sbjct: 291 FHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGS 350

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
            G+ ++A  L+      G   S  +YN I+    +KG L EAL   EEM  +  AP L+T
Sbjct: 351 AGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEM-KKDAAPNLST 409

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           YN+LI  LCK G V  A      M    + P++++ N ++   C++  + EA  +F+ + 
Sbjct: 410 YNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMN 469

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
            +   P  VT+ +LIDGL + G ++ A +L E M++   +P+ + YT ++    K G   
Sbjct: 470 HKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKE 529

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
              + F EM+ +G  PD       +    K G+T +   L EE+ ++GF PD+++Y++L+
Sbjct: 530 DGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILI 589

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
           HGL K G   E  EL   M   G + D   Y + I    + G + +   L   M  KG  
Sbjct: 590 HGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQ 649

Query: 591 PTLVTY-----------------------------------TVLIHAHAARGRLELAFMY 615
           PT+VTY                                   + LI      GR++ A++ 
Sbjct: 650 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLI 709

Query: 616 FSEMQVKGIRPNV-----------------------------------ITYNALINGLCR 640
             E+  KG+ PNV                                   ITY+ LINGLCR
Sbjct: 710 MEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCR 769

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
           +R+ ++A+  + +M+++G+ PN  TYT +I     AGN  EA  L++        PD  +
Sbjct: 770 VRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSAS 829

Query: 701 HSALL 705
           ++A++
Sbjct: 830 YNAII 834



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 161/577 (27%), Positives = 272/577 (47%), Gaps = 23/577 (3%)

Query: 103 KPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVE------TVVCVNMH 156
           K  +A +FF  +++  G+  D+  + +++ +L +   L  A  + E       V C   +
Sbjct: 283 KVDMAWKFFHEIKSH-GLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAY 341

Query: 157 GILDVLIGGG--------------LSSCV-SIKILDLLLLIYTKKSMVEQCLLVFNKMLR 201
             + +  G                   C+ S+   + +L    KK  + + L  F +M +
Sbjct: 342 NTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKK 401

Query: 202 NGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQE 261
           +   P++   N +I +L   G    A +V   M E G+ P+++T N M+D  CK  ++ E
Sbjct: 402 DAA-PNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDE 460

Query: 262 ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC 321
           A  +   M  + CSP+ VT+  LI G  + G ++ A  L   ML      +A  Y  +I 
Sbjct: 461 ACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIK 520

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
            + + G   +   + +EM+ RG +P L   N  +  + K G     R  F E+  +  IP
Sbjct: 521 SFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIP 580

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           D++SY+ L++G  ++G   E + LF  ++ +  V     YNT IDG C+ G +  A QL 
Sbjct: 581 DVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLL 640

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
           E M  +G  P V+TY  +++G  K+  L  A   F E    GL+ +   Y++ I G  K+
Sbjct: 641 EEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKV 700

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
           G   EAY + EE++ KG  P++ T+N L+  L K   + EA    + M      P+HITY
Sbjct: 701 GRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITY 760

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
           + +I+    +    +    +  M ++GL P  +TYT +I   A  G +  A   F   + 
Sbjct: 761 SILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKA 820

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
            G  P+  +YNA+I GL   RR  +AY +F +   +G
Sbjct: 821 NGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKG 857



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 146/538 (27%), Positives = 256/538 (47%), Gaps = 6/538 (1%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           + +++ Y      ++   +  +    G +P V   N I+  L   G   +A   +  M +
Sbjct: 342 NTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKK 401

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
               P++ TYN ++D  CK GE++ A ++   M+  G  PN +T N++I    +  +L++
Sbjct: 402 -DAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDE 460

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  +   M          ++  +I G  ++G + +A  L E+M+     P    Y  LI 
Sbjct: 461 ACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIK 520

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
              K GR  D    F EM+ +   PD+   N  +    ++G  G+   LF+E++SR  +P
Sbjct: 521 SFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIP 580

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
            V++Y+ LI GL + G      +L   M  QG + D   Y   ++G CK G ++ A +  
Sbjct: 581 DVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLL 640

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
            EM  KG QP    Y + I G  K+    EAY L EE  + G   +++ Y+ L+ G  K+
Sbjct: 641 EEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKV 700

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G ++EA  ++ +++  G  P+  T+  ++ A ++  ++      F NM     +P  +TY
Sbjct: 701 GRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITY 760

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
           ++LI+      +   AF+++ EMQ +G++PN ITY  +I GL +   I +A  LF   + 
Sbjct: 761 SILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKA 820

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKE--MLDREIEPDYCTHSALLLKQLDKD 712
            G +P+  +Y  +I     +    EA ++++E  M    I    C     LL  L KD
Sbjct: 821 NGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIA---LLDALQKD 875



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 136/525 (25%), Positives = 237/525 (45%), Gaps = 44/525 (8%)

Query: 232 RMMGEF---GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
           +++GE    G  PS  T   ++ S  K  +++E  +L+  M+     P    Y  LI   
Sbjct: 149 QILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGAL 208

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
           S   E +    L   M +LG +VS H +  +I  ++ +G L  AL+L +EM +  +   +
Sbjct: 209 SSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADI 268

Query: 349 ATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDE 408
             YN+ I    K G+V  A   F E+    ++PD ++Y +++   C+   + EA  +F++
Sbjct: 269 VLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQ 328

Query: 409 LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
           +     VP    YNT+I G    G  + A  L E    +G +P VI Y  ++    K G 
Sbjct: 329 MEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGR 388

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
           L  A   F EM +K   P+   Y   I    K G+   A+++++ M   G  P+++T N+
Sbjct: 389 LGEALRTFEEM-KKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNI 447

Query: 529 LVHGLCKLGSLEEANELLRKM------------------------VGDGF---------- 554
           ++  LCK   L+EA  +   M                        V D +          
Sbjct: 448 MIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSD 507

Query: 555 -IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
            IP+ + YTS+I +  + G    G  +F  M+ +G SP L      +      G      
Sbjct: 508 KIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGR 567

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
             F E++ +G  P+V++Y+ LI+GL +     + Y LF  M+E+G + + + Y   I+  
Sbjct: 568 ALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGF 627

Query: 674 CNAGNWQEALRLYKEMLDREIEPDYCTHSALL-----LKQLDKDY 713
           C +G   +A +L +EM  +  +P   T+ +++     + +LD+ Y
Sbjct: 628 CKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAY 672



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 107/264 (40%), Gaps = 2/264 (0%)

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
           E   +Q + P+     ++V    K        +   EM   G  P        I   +K 
Sbjct: 119 ERKTDQALCPEAYDSLLLVMA--KNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKS 176

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
               E + L + M    F P    Y  L+  L  +   +    L  +M   G+      +
Sbjct: 177 NKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLF 236

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
           T++I      G L     L + M    L   +V Y V I      G++++A+ +F E++ 
Sbjct: 237 TTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKS 296

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
            G+ P+ +TY ++I  LC+  R+D+A  +F  ME+   +P  Y Y  +I    +AG + E
Sbjct: 297 HGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDE 356

Query: 682 ALRLYKEMLDREIEPDYCTHSALL 705
           A  L +    R   P    ++ +L
Sbjct: 357 AYSLLERQKARGCIPSVIAYNCIL 380


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 175/669 (26%), Positives = 308/669 (46%), Gaps = 67/669 (10%)

Query: 90  PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVET 149
           PE+  RVL ++ E P +A  FF+W   +PG + + +    +L   +++     A+ +++ 
Sbjct: 43  PEVAGRVLQQV-EDPDVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKE 101

Query: 150 ---VVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLP 206
               +C     +   +I G                 + K   V+Q   + ++M   G+  
Sbjct: 102 ELEPLCFPNEIMYTTVING-----------------FCKAGQVDQAFELLDEMKERGVKM 144

Query: 207 DVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELL 266
           DV   + +I+ L   G   +A E ++ MGE    P+++TYNT+++  CK   + EALEL 
Sbjct: 145 DVLLHSTLIQGLCRKGRIDEALEQFKSMGE-ECSPNVITYNTVVNGLCKANRIDEALELF 203

Query: 267 WEMQGR-----GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC 321
            +M+ R     GC P+ ++Y+ +I    +   +++A    + M  +G   +  +Y+ +I 
Sbjct: 204 DDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLID 263

Query: 322 G----------------YSEKGLLV-------------------EALNLEEEMVTRGVAP 346
           G                  EKG  +                   +A    E ++  G  P
Sbjct: 264 GLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKP 323

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
            + TYN+ ++GLCK GRV +A     EM+   V PD+I+Y++++ G+C++G + +A  +F
Sbjct: 324 NVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVF 383

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
             +     +P  VT+ TL+ G   +     A ++ E+M+N G +P + TY ++++  C  
Sbjct: 384 TRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGA 443

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
            ++  A E +++M RK  QPD   Y   I    +     EA    + M A    P+    
Sbjct: 444 DSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAIC 503

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           + LV  LCK G ++EA  +L  +V  G  P   T+  ++    E   LR+  +  + +LR
Sbjct: 504 HALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILV----EELYLRKKWEAASKLLR 559

Query: 587 K-GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
             G      TY++ +      G+ + A     +M +KG+RP+  TY A++  LC L R++
Sbjct: 560 SPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVE 619

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            A   F  M   G  P   TYT+LI E C+A    EA R+++ M+     P   T   L 
Sbjct: 620 SAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTLS 679

Query: 706 LKQLDKDYK 714
               D  Y+
Sbjct: 680 SCLRDAGYQ 688



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 120/249 (48%), Gaps = 6/249 (2%)

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           + G Q + +     +   +K     EA+RL +E L     P+ I Y  +++G CK G ++
Sbjct: 69  KPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVD 128

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           +A ELL +M   G   D + ++++I      G +    + F +M  +  SP ++TY  ++
Sbjct: 129 QAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEE-CSPNVITYNTVV 187

Query: 601 HAHAARGRLELAFMYFSEMQVK-----GIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           +      R++ A   F +M+ +     G  P+VI+Y+ +I+ LC+ +R+D+AY  F  M 
Sbjct: 188 NGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMR 247

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKV 715
             G  PN  TY+ LI+  C      E L L   M ++    +    +A+L      D + 
Sbjct: 248 AVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQE 307

Query: 716 HAVEYLESL 724
            A ++ E L
Sbjct: 308 KACQFFERL 316


>gi|224113637|ref|XP_002316529.1| predicted protein [Populus trichocarpa]
 gi|222859594|gb|EEE97141.1| predicted protein [Populus trichocarpa]
          Length = 678

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 187/668 (27%), Positives = 320/668 (47%), Gaps = 57/668 (8%)

Query: 48  SVLNPESESYYKELIISTVEEKPWAFCNNRWVSDHFQAVVSDPELLVRVLNRIREKPRIA 107
           S+LNP S+      I   ++++ W F      S    A+VS      RV+   R  P++ 
Sbjct: 47  SILNPISDDVVLRAICVNLKQRRWNFLEKNLAS-LTNALVS------RVVCEFRNTPQLV 99

Query: 108 LRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVL--IGG 165
           L F+ WV  +  V     + C+++ +L+ S     A  ++  ++ VN    L+VL  +  
Sbjct: 100 LEFYNWVGEKKSVLHSLEISCSVIHVLVNSRRYDDALSLMGNLMTVNGLSPLEVLEALNN 159

Query: 166 GLSSCVS-IKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCN----RIIKVLRD 220
               C S   + D L+   T+         V  K+   G    +   N     +IKV   
Sbjct: 160 SYGICESNHAVFDALVRACTQIGATVGACEVIKKLQIEGCWVTIHAWNNFLSHLIKVNEI 219

Query: 221 NGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVT 280
           + F +    VY+ M  +G   ++ T+N ++ + CK+ ++QEAL + + +   G  PN VT
Sbjct: 220 HRFWI----VYKEMVSYGYMENVNTFNVVVHALCKDCKLQEALSVFYRILKSGIWPNVVT 275

Query: 281 YNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV 340
           +N+++ G  + G+++ A  L+R M                                E M 
Sbjct: 276 FNMMVDGACKMGDMDLALKLVRKM--------------------------------EIMS 303

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
              + P   TYN LI G CK G ++ A     EM++ ++ P++ +Y T++ GY R+G + 
Sbjct: 304 AGSIKPNSVTYNSLIDGFCKIGGITVAEELRNEMMKIDIEPNVRTYATMIEGYSRAGCLE 363

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           EA  L DE+  R L+P  V YN+++  L   GD++ A  +  +M ++ I  D  T +I+ 
Sbjct: 364 EALRLCDEMVERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTCSILT 423

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
            G C+ G ++ A +F N++L   L  D F++   I    K  + + A +L   M  +G  
Sbjct: 424 RGLCRNGYITTALKFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGLV 483

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           PD++T+  L+ G CK G++E A ++  KMV     P+ + Y SII+   + G +   R L
Sbjct: 484 PDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCKDGLVDVARSL 543

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
            + + R GL  T +TY  LI+ +   G+ + AF   + MQ  GI  +  TYN +I  LC+
Sbjct: 544 VDVLQRMGLVDT-ITYNTLINGYFNCGKFDKAFKLSTLMQNAGILASSATYNTVIKFLCK 602

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTIL---INENCNAGNWQEALRLYKEMLDREIEPD 697
              + +A  L   M   G+LP+  TY  L   IN+NC+A   +E + L+  M+ + + PD
Sbjct: 603 FGCVQEAKELMTMMVLWGVLPDNITYRTLVININKNCSA---EEVIELHDYMVLKGVVPD 659

Query: 698 YCTHSALL 705
             T+  ++
Sbjct: 660 KLTYENIV 667



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 132/277 (47%), Gaps = 11/277 (3%)

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
            +  +V    ++G    A E   ++  +G      A+   ++  +K+ +    + + +EM
Sbjct: 170 VFDALVRACTQIGATVGACEVIKKLQIEGCWVTIHAWNNFLSHLIKVNEIHRFWIVYKEM 229

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
           ++ G+  ++ T+NV+VH LCK   L+EA  +  +++  G  P+ +T+  ++  + +MGD+
Sbjct: 230 VSYGYMENVNTFNVVVHALCKDCKLQEALSVFYRILKSGIWPNVVTFNMMVDGACKMGDM 289

Query: 575 RRGRDLFNNMLRK-------GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
               DL   ++RK        + P  VTY  LI      G + +A    +EM    I PN
Sbjct: 290 ----DLALKLVRKMEIMSAGSIKPNSVTYNSLIDGFCKIGGITVAEELRNEMMKIDIEPN 345

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYK 687
           V TY  +I G  R   +++A  L  +M E G+LPN   Y  +++     G+   A  ++ 
Sbjct: 346 VRTYATMIEGYSRAGCLEEALRLCDEMVERGLLPNSVVYNSIMHWLYMEGDVDGASLVFT 405

Query: 688 EMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           +M D++I  D  T S L        Y   A+++L  +
Sbjct: 406 DMSDKQIPLDKFTCSILTRGLCRNGYITTALKFLNQV 442


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
            chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 165/566 (29%), Positives = 285/566 (50%), Gaps = 38/566 (6%)

Query: 177  DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
            ++++  Y+K   V++ + + ++M+RNG  PDV   N +I  L   G   +A +++  M +
Sbjct: 511  NMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKD 570

Query: 237  FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
              + P++VTYNT+L    KEG +Q+A+EL   M  + CSPN +++N L+  F +N E+E 
Sbjct: 571  MKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVEL 630

Query: 297  ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
            A  +   M  +  K    +YN +I G  ++  +  A     ++  + + P   T   L+ 
Sbjct: 631  ALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQL-KKSMHPDHVTICTLLP 689

Query: 357  GLCKWGRVSDA-----------RHR----FFEMLRKNVIPD-------IISYNTLLYGYC 394
            GL K G++ DA           R R    F+E L    + +       I +   +L G C
Sbjct: 690  GLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGIC 749

Query: 395  RSGNIG--------------EAFLLFDELRSR-NLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
            R  +                 A+ +FD+   +  + PT+ +YN LI  L      E A  
Sbjct: 750  REDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWD 809

Query: 440  LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
            L ++M N G  PD  T+ +++    K G ++   E + EM+ +  +PD   Y   I+   
Sbjct: 810  LFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLA 869

Query: 500  KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
            K  +  +A     ++++  F P   TY  L+ GL K+G LEEA  L  +M   G  P+  
Sbjct: 870  KSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCA 929

Query: 560  TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
             +  +I+   ++GD      LF  M+ +G+ P L +YT+L+      GR++ A  YF+E+
Sbjct: 930  IFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNEL 989

Query: 620  QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
            +  G+ P+ I YN +INGL + +R+++A  L+ +M   GI+P+ YTY  L+     AG  
Sbjct: 990  KSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMV 1049

Query: 680  QEALRLYKEMLDREIEPDYCTHSALL 705
            ++A R+Y+E+    +EPD  T++AL+
Sbjct: 1050 EQAKRMYEELQLAGLEPDVFTYNALI 1075



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 155/553 (28%), Positives = 261/553 (47%), Gaps = 39/553 (7%)

Query: 176 LDLLLLIYTKKSM---VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR 232
           LD  L I+   S+   + Q   V NKM + G + +  + N +I +L  +GF  +A EVYR
Sbjct: 157 LDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYR 216

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKE-----------------------------------G 257
            M   G+KPS+ TY+ ++ +  K+                                   G
Sbjct: 217 RMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAG 276

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
           ++ EA E+   M   GC P+ VTY VLI      G+LE A+ L   M   G K     Y 
Sbjct: 277 KIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYI 336

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            ++  +++ G L        +M   G  P + T+ IL+  LCK     +A   F  M ++
Sbjct: 337 TLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQ 396

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
            ++P++ +YNTL+ G  R+G I +A  L   + S  + PT  TYN  ID   + G+   A
Sbjct: 397 GILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKA 456

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
            +  E M  +GI+P+++     +    +MG L  A+  FN +   GL PD   Y   +  
Sbjct: 457 VETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKC 516

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
             K+G   EA  L  EM+  G  PD+I  N L+  L K G ++EA ++  +M      P 
Sbjct: 517 YSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPT 576

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
            +TY +++    + G +++  +LF +M+ K  SP  +++  L+        +ELA   FS
Sbjct: 577 VVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFS 636

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
           +M V   +P+V+TYN +I GL +  +++ A+  F  + ++ + P+  T   L+      G
Sbjct: 637 KMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQL-KKSMHPDHVTICTLLPGLVKCG 695

Query: 678 NWQEALRLYKEML 690
              +A+ + ++ +
Sbjct: 696 QIGDAISIARDFM 708



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 142/502 (28%), Positives = 257/502 (51%)

Query: 204 LLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEAL 263
           +L   + CN +++ LR +        V+  M +  I+  + TY T+  +    G +++  
Sbjct: 118 VLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMT 177

Query: 264 ELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGY 323
            +L +M+  G   N  +YN LI    ++G   +A  + R M+  GLK S  +Y+ ++   
Sbjct: 178 TVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVAL 237

Query: 324 SEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
            +K      + L +EM   G+ P + T+ I I  L + G++ +A   F  M  +   PD+
Sbjct: 238 GKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDL 297

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
           ++Y  L+   C +G +  A  LF ++++    P  V Y TL+D    +GDL+  ++    
Sbjct: 298 VTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQ 357

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           M   G +PDV+T+TI+V+  CK  +   A   F+ M ++G+ P+   Y T I G L+ G 
Sbjct: 358 MEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGR 417

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
             +A +L   M + G  P   TYN+ +    K G   +A E   KM   G +P+ +   +
Sbjct: 418 IEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNA 477

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
            +++  EMG LR  + +FN +   GL+P  VTY +++  ++  G+++ A    SEM   G
Sbjct: 478 SLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNG 537

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
             P+VI  N+LI+ L +  R+D+A+ +F  M++  + P   TY  L++     G  Q+A+
Sbjct: 538 CEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAI 597

Query: 684 RLYKEMLDREIEPDYCTHSALL 705
            L++ M++++  P+  + + LL
Sbjct: 598 ELFESMIEKKCSPNTISFNTLL 619



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 145/536 (27%), Positives = 256/536 (47%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           VE    VF  M +  +  D+     I K L   G   +   V   M + G   +  +YN 
Sbjct: 138 VEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNG 197

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++    + G   EALE+   M   G  P+  TY+ L+    +  + E    L+++M  LG
Sbjct: 198 LIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLG 257

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           L+ + +++   I      G + EA  +   M   G  P L TY +LI  LC  G++ +A+
Sbjct: 258 LRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAK 317

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F +M      PD + Y TLL  +   G++      + ++ +   +P VVT+  L+D L
Sbjct: 318 ELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVL 377

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+  D + A    + M  QGILP++ TY  ++ G  + G +  A +    M   G+QP  
Sbjct: 378 CKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTA 437

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
           + Y   I    K G+T +A    E+M AKG  P+++  N  ++ L ++G L EA  +   
Sbjct: 438 YTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNG 497

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           +  +G  PD +TY  ++    ++G +    +L + M+R G  P ++    LI +    GR
Sbjct: 498 LRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGR 557

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           ++ A+  F  M+   + P V+TYN L++GL +  R+ +A  LF  M E+   PN  ++  
Sbjct: 558 VDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNT 617

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           L++  C     + AL+++ +M   + +PD  T++ ++   + ++   HA  +   L
Sbjct: 618 LLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQL 673



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 184/720 (25%), Positives = 307/720 (42%), Gaps = 121/720 (16%)

Query: 100 IREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAY-------WVVETVVC 152
           IR      L  F+ +  + G+++      T+L  + ++G + +AY        ++++  C
Sbjct: 153 IRRDLDTYLTIFKALSIRGGLRQ----MTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFC 208

Query: 153 VNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCN 212
                +   ++  GL    S+K    L++   KK   E  +++  +M   GL P+V    
Sbjct: 209 GEALEVYRRMVSEGLKP--SLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFT 266

Query: 213 RIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR 272
             I+VL   G   +A E++R M + G  P +VTY  ++D+ C  G+++ A EL  +M+  
Sbjct: 267 ICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKAN 326

Query: 273 GCSPNGVTYNVLITGFSRNGELE---------QARGLIRD-------------------- 303
           G  P+ V Y  L+  F+  G+L+         +A G + D                    
Sbjct: 327 GHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEA 386

Query: 304 ------MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
                 M K G+  + H+YN +ICG    G + +AL L   M + GV PT  TYNI I  
Sbjct: 387 FATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDY 446

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
             K G    A   F +M  K ++P+I++ N  LY     G + EA  +F+ LR   L P 
Sbjct: 447 FGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPD 506

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
            VTYN ++    + G ++ A  L   MI  G  PDVI    +++   K G +  A + F+
Sbjct: 507 SVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFD 566

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            M    L P    Y T ++G  K G   +A  L E M+ K   P+ I++N L+   CK  
Sbjct: 567 RMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKND 626

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            +E A ++  KM      PD +TY ++I+  ++   +      F+  L+K + P  VT  
Sbjct: 627 EVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQ-LKKSMHPDHVTIC 685

Query: 598 VLIHAHAARGRLELA------FMY---------FSEMQVKGI-------RPNVITYNALI 635
            L+      G++  A      FMY         F E  + G        +  +     ++
Sbjct: 686 TLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVL 745

Query: 636 NGLCR-------LRRI-------------------------------------------D 645
           NG+CR       L R+                                           +
Sbjct: 746 NGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTE 805

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +A+ LF DM+  G  P+ +T+ +L+  +  +G   E   LYKEM+ R  +PD  T++ ++
Sbjct: 806 KAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVI 865



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 155/560 (27%), Positives = 251/560 (44%), Gaps = 71/560 (12%)

Query: 185  KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
            K   V++   +F++M    L P V   N ++  L   G   KA E++  M E    P+ +
Sbjct: 554  KAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTI 613

Query: 245  TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN------------- 291
            ++NT+LD FCK  E++ AL++  +M    C P+ +TYN +I G  +              
Sbjct: 614  SFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQL 673

Query: 292  ---------------------GELEQARGLIRD-MLKLGLKVSAHSYNPIICGYSEKGLL 329
                                 G++  A  + RD M ++  +V+   +  ++ G   +  +
Sbjct: 674  KKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEM 733

Query: 330  VEALNLEEEMVTRGV------------------------------------APTLATYNI 353
             +A+   EE+V  G+                                    +PTLA+YN 
Sbjct: 734  DKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNC 793

Query: 354  LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
            LI  L +      A   F +M      PD  ++N LL  + +SG I E F L+ E+ SR 
Sbjct: 794  LIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRR 853

Query: 414  LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
              P  +TYN +I  L +  +L+ A     ++++    P   TY  +++G  K+G L  A 
Sbjct: 854  CKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAM 913

Query: 474  EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
              F EM   G +P+   +   I G  K+GDT  A +L + M+ +G  PDL +Y +LV  L
Sbjct: 914  RLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCL 973

Query: 534  CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
            C  G ++EA     ++   G  PD I Y  II+   +   +     L+N M  +G+ P L
Sbjct: 974  CLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDL 1033

Query: 594  VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
             TY  L+      G +E A   + E+Q+ G+ P+V TYNALI G       + AY ++ +
Sbjct: 1034 YTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKN 1093

Query: 654  MEEEGILPNKYTYTILINEN 673
            M  +G  PN  TY  L N++
Sbjct: 1094 MMVDGCNPNIGTYAQLPNQS 1113



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 145/288 (50%)

Query: 176  LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
             ++LL ++ K   + +   ++ +M+     PD    N +I  L  +    KA + +  + 
Sbjct: 826  FNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLV 885

Query: 236  EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
                +P+  TY  ++D   K G ++EA+ L  EM   GC PN   +N+LI G+ + G+ E
Sbjct: 886  SSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTE 945

Query: 296  QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
             A  L + M+  G++    SY  ++      G + EAL    E+ + G+ P    YN +I
Sbjct: 946  TACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRII 1005

Query: 356  YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
             GL K  R+ +A   + EM  + ++PD+ +YN+L+     +G + +A  +++EL+   L 
Sbjct: 1006 NGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLE 1065

Query: 416  PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
            P V TYN LI G     + E A  + +NM+  G  P++ TY  + N S
Sbjct: 1066 PDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPNQS 1113



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 86/177 (48%)

Query: 175  ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
            I ++L+  Y K    E    +F +M+  G+ PD+K+   ++  L   G   +A   +  +
Sbjct: 930  IFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNEL 989

Query: 235  GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
               G+ P  + YN +++   K   M+EAL L  EM+ RG  P+  TYN L+      G +
Sbjct: 990  KSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMV 1049

Query: 295  EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
            EQA+ +  ++   GL+    +YN +I GYS       A  + + M+  G  P + TY
Sbjct: 1050 EQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTY 1106


>gi|358346363|ref|XP_003637238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503173|gb|AES84376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 663

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 170/585 (29%), Positives = 288/585 (49%), Gaps = 59/585 (10%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           M+ NG++PDV  C+ I+     +G   +A  ++R M E G+ P+ V+Y T+++S  K G 
Sbjct: 1   MIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGR 60

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           + EA  L  +M  RG S + VT   ++ G  + G+ ++A  +   +LKL L  +  +Y+ 
Sbjct: 61  VMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSA 120

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           ++ GY + G +  A  + ++M    V P + T++ +I G  K G +S A     EM+++N
Sbjct: 121 LLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRN 180

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
           V+P+ I Y  L+ GY ++G    A     E++SR L  + V ++ L++ L R G ++ A+
Sbjct: 181 VMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEAR 240

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
            L  +M ++GI PD++ Y  +++G  K GN   A     EM  K ++ D  AY   I G 
Sbjct: 241 SLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGL 300

Query: 499 LKLG--------------------DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           L+LG                     T +A  +  EM + G  P+ +TYN+L+ GLCK G+
Sbjct: 301 LRLGKYDPRYVCSRMIELGLAPDCKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGA 360

Query: 539 LEEANELLRKMVGDGFIPDHIT-----------------------------------YTS 563
           +E+A   L +M+   F+P  IT                                   Y +
Sbjct: 361 VEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNT 420

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           +I     +G  R+ + + + M+++G+S  LVTY  LI  +     +E A   +S+M V G
Sbjct: 421 LITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDG 480

Query: 624 IRPNVITYNALINGLCR----LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
           I PN+ TYN L+ GL         +++   L  +M E G++PN  TY IL++     GN 
Sbjct: 481 IAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNR 540

Query: 680 QEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           ++ + L+ EM+ +   P   T++ L+         + A E L  L
Sbjct: 541 KKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDL 585



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 154/561 (27%), Positives = 265/561 (47%), Gaps = 67/561 (11%)

Query: 197 NKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKE 256
           ++M+  G+  D+  C  ++  L   G + +A EV+  + +  + P+ VTY+ +LD +CK 
Sbjct: 69  SQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKL 128

Query: 257 GEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSY 316
           G+M+ A  +L +M+     PN +T++ +I G+++ G L +A  ++R+M++  +  +   Y
Sbjct: 129 GKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVY 188

Query: 317 NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
             +I GY + G    A +  +EM +R +  +   ++IL+  L + GR+ +AR    +M  
Sbjct: 189 AILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYS 248

Query: 377 KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD--- 433
           K + PDI++Y +L+ GY + GN   A  +  E++ +N+   VV YN LI GL R G    
Sbjct: 249 KGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDP 308

Query: 434 -----------------LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
                             E A  +   M + GI+P+ +TY I++ G CK G +  A    
Sbjct: 309 RYVCSRMIELGLAPDCKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESAL 368

Query: 477 NEML-----------------------------------RKGLQPDRFAYTTQIAGELKL 501
           +EML                                     GL+     Y T I    +L
Sbjct: 369 DEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRL 428

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
           G T +A  + +EM+ +G   DL+TYN L+ G C    +E+A +   +M  DG  P+  TY
Sbjct: 429 GMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTY 488

Query: 562 TSII----HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
            +++    +A L    +     L + M  +GL P   TY +L+  +   G  +   +   
Sbjct: 489 NTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHI 548

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
           EM  KG  P + TYN LI+   +  ++ +A  L  D+  +G +PN +TY IL    C   
Sbjct: 549 EMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDIL---TCGWL 605

Query: 678 NWQEALRLYKEMLDREIEPDY 698
           N       Y+  +DR ++  Y
Sbjct: 606 NLS-----YEPEIDRSLKRSY 621



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/398 (26%), Positives = 188/398 (47%), Gaps = 24/398 (6%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           I D+LL    +   +++   +   M   G+ PD+ N   +I      G  + A  + + M
Sbjct: 222 IFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEM 281

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGE--------------------MQEALELLWEMQGRGC 274
            E  I+  +V YN ++    + G+                     ++AL++L EM+  G 
Sbjct: 282 KEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCKTEDALDILNEMKSYGI 341

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
            PN VTYN+LI G  + G +E+A   + +ML +    +  ++  ++  YS      + L 
Sbjct: 342 MPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQ 401

Query: 335 LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
           + E++V  G+  +L  YN LI   C+ G    A+    EM+++ +  D+++YN L+ GYC
Sbjct: 402 IHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYC 461

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG----DLEVAQQLKENMINQGIL 450
              ++ +A   + ++    + P + TYNTL+ GL   G     +E  ++L   M  +G++
Sbjct: 462 TGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLV 521

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
           P+  TY I+V+G  ++GN         EM+ KG  P    Y   I+   K G   EA  L
Sbjct: 522 PNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEAREL 581

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             ++L KG  P+  TY++L  G   L    E +  L++
Sbjct: 582 LNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDRSLKR 619


>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
          Length = 1315

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 144/432 (33%), Positives = 225/432 (52%), Gaps = 5/432 (1%)

Query: 268  EMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKG 327
            EM  RG  P+  TY  +I G+ RNG + +A   I +M++ G  V   +   II  + EK 
Sbjct: 821  EMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKS 880

Query: 328  LLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYN 387
            L+  A+    ++   G++P L  Y+ +I GLCK G V  A     EM++    P++ ++ 
Sbjct: 881  LVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHT 940

Query: 388  TLLYGYCRSGNIGEAFLLFDEL-RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMIN 446
            +L++G C+ G    AF LF +L RS N  P V TY  +I G C+   L  A+ L E M  
Sbjct: 941  SLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKE 1000

Query: 447  QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSE 506
            QG++P+  TYT +++G CK GN S A E    M  +G  P+   Y + + G  K G   E
Sbjct: 1001 QGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEE 1060

Query: 507  AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
            A++L           D +TY +L+   CK   + +A   L KM   GF PD   YT++I 
Sbjct: 1061 AFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIA 1120

Query: 567  ASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRP 626
            A      ++    LF+ +++ GL+PT  TYT +I  +    ++ LA  +F +M   G  P
Sbjct: 1121 AFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAP 1180

Query: 627  NVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL--- 683
            + I+Y ALI+GLC+  R+D+A  L+  M ++G+ P + T   L  E C   ++  A+   
Sbjct: 1181 DSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVIL 1240

Query: 684  -RLYKEMLDREI 694
             RL K++  R +
Sbjct: 1241 ERLNKKLWIRTV 1252



 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 150/489 (30%), Positives = 246/489 (50%), Gaps = 16/489 (3%)

Query: 249  MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
            M+  F + G+++EA++++ +M+ +G        N +I   +    +E A  +  +M   G
Sbjct: 767  MVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARG 826

Query: 309  LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            +   + +Y  II GY   G ++EA     EM+ RG     AT  ++I   C+   V+ A 
Sbjct: 827  VYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAV 886

Query: 369  HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
              F ++ +  + P++I+Y++++ G C+ G++ +AF L +E+      P V T+ +LI GL
Sbjct: 887  WFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGL 946

Query: 429  CRYGDLEVAQQLKENMI-NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
            C+ G  E A +L   +I +    P+V TYT M++G CK   LS A   F  M  +GL P+
Sbjct: 947  CKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPN 1006

Query: 488  RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
               YTT I G  K G+ S+AY L E M  +GF P+  TYN +V GLCK G  EEA +LL 
Sbjct: 1007 TNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLN 1066

Query: 548  KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
                +    D +TYT +I    +  D+ +     N M + G  P +  YT LI A   + 
Sbjct: 1067 TGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQN 1126

Query: 608  RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
             ++ +   F E+   G+ P   TY ++I G CR +++  A   F  M + G  P+  +Y 
Sbjct: 1127 MMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYG 1186

Query: 668  ILINENCNAGNWQEALRLYKEMLDREIEP----------DYC-----THSALLLKQLDKD 712
             LI+  C      EA +LY  M+D+ + P          +YC       + ++L++L+K 
Sbjct: 1187 ALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNKK 1246

Query: 713  YKVHAVEYL 721
              +  V  L
Sbjct: 1247 LWIRTVHTL 1255



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 166/606 (27%), Positives = 271/606 (44%), Gaps = 37/606 (6%)

Query: 102  EKPRIALRFFRWVETQPGVK--RDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGIL 159
            E   +AL FF W    P  +     ++ CT+   L+    L  A+ VVE +V     G+ 
Sbjct: 719  EGSMVALSFFYWAVGFPKFRYFMRLYIVCTM--SLVGKCNLERAHEVVECMV-----GVF 771

Query: 160  DVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLR 219
              +  G L   V + ILD                     M   GL+   +  NRII V  
Sbjct: 772  AEI--GKLKEAVDM-ILD---------------------MRNQGLVLTTRVMNRIILVAA 807

Query: 220  DNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGV 279
            +      A  V+  M   G+ P   TY  ++  +C+ G + EA   + EM  RG   +  
Sbjct: 808  EMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNA 867

Query: 280  TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
            T  ++IT F     + +A      + K+GL  +  +Y+ +I G  ++G + +A  L EEM
Sbjct: 868  TLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEM 927

Query: 340  VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK-NVIPDIISYNTLLYGYCRSGN 398
            V  G  P + T+  LI+GLCK G    A   F +++R  N  P++ +Y  ++ GYC+   
Sbjct: 928  VKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEK 987

Query: 399  IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
            +  A +LF+ ++ + LVP   TY TLIDG C+ G+   A +L E M N+G  P+  TY  
Sbjct: 988  LSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNS 1047

Query: 459  MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
            +V+G CK G    A +  N   +  ++ D   YT  I+ + K  D ++A     +M   G
Sbjct: 1048 IVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVG 1107

Query: 519  FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
            F PD+  Y  L+   C+   ++++ +L  +++  G  P   TYTS+I        +    
Sbjct: 1108 FQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAV 1167

Query: 579  DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
              F  M   G +P  ++Y  LI       RL+ A   +  M  KG+ P  +T   L    
Sbjct: 1168 KFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEY 1227

Query: 639  CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
            C+      A  +   + ++  +   +T   LI + C       A   + ++LD+E+  D 
Sbjct: 1228 CKTEDFASAMVILERLNKKLWIRTVHT---LIRKLCCEKKVALAALFFHKLLDKEVNVDR 1284

Query: 699  CTHSAL 704
             T +A 
Sbjct: 1285 VTLAAF 1290



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 179/387 (46%), Gaps = 4/387 (1%)

Query: 185  KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMGEFGIKPSI 243
            K+  V+Q   +  +M++NG  P+V     +I  L   G++ +A  ++ +++     KP++
Sbjct: 913  KRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNV 972

Query: 244  VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
             TY  M+  +CKE ++  A  L   M+ +G  PN  TY  LI G  + G   +A  L+  
Sbjct: 973  HTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMEL 1032

Query: 304  MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
            M   G   +  +YN I+ G  ++G   EA  L        +     TY ILI   CK   
Sbjct: 1033 MSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRAD 1092

Query: 364  VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
            ++ A     +M +    PDI  Y TL+  +CR   + ++  LFDE+    L PT  TY +
Sbjct: 1093 MNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTS 1152

Query: 424  LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
            +I G CR   + +A +  + M + G  PD I+Y  +++G CK   L  AR+ ++ M+ KG
Sbjct: 1153 MICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKG 1212

Query: 484  LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
            L P      T      K  D + A  + E +  K +   + T + L+  LC    +  A 
Sbjct: 1213 LSPCEVTRVTLTYEYCKTEDFASAMVILERLNKKLW---IRTVHTLIRKLCCEKKVALAA 1269

Query: 544  ELLRKMVGDGFIPDHITYTSIIHASLE 570
                K++      D +T  +   A +E
Sbjct: 1270 LFFHKLLDKEVNVDRVTLAAFNTACIE 1296



 Score = 42.7 bits (99), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 57/127 (44%)

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           ++   A  G+L+ A     +M+ +G+       N +I     +R ++ A  +F +M   G
Sbjct: 767 MVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARG 826

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAV 718
           + P+  TY  +I   C  GN  EA R   EM++R    D  T + ++    +K     AV
Sbjct: 827 VYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAV 886

Query: 719 EYLESLT 725
            +   +T
Sbjct: 887 WFFHKVT 893


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 161/513 (31%), Positives = 256/513 (49%), Gaps = 6/513 (1%)

Query: 191 QCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTML 250
           Q    F+ M+ +   P + +   ++  L       +   +Y  M   GI P   T N +L
Sbjct: 79  QAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILL 138

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
           +  C    + E L ++  +  RG  P+ VTY  LI G      + +A  L   M KLG  
Sbjct: 139 NCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCT 198

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG------VAPTLATYNILIYGLCKWGRV 364
            +A +Y  ++ G    G +  AL L +EM+           P + +Y+I+I  LCK  R 
Sbjct: 199 PNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRRE 258

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            +AR  F EM  + + P +ISY +L++G+C  G   EA  LF+E+ ++ + P VVT+N L
Sbjct: 259 DEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVL 318

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           ID LC+ G +  A+ L E MI +GI+P+++TY  ++ G C +G+L+ ARE F  M  KG 
Sbjct: 319 IDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGC 378

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
           +PD   YT  I G  K     EA +L   ML  G  PD+ TY  L+ GL + G + +A +
Sbjct: 379 EPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKK 438

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           L   M   G   D   Y   ++   + G L    +LFN +    +   +  +  LI    
Sbjct: 439 LFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLC 498

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
             G+LE A+  F ++  + ++P+V+TYN +I+  CR  ++ +A  LF  ME+ G  P+K 
Sbjct: 499 KAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKI 558

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           TY  LI     +   ++ + L   M+ R++  D
Sbjct: 559 TYATLIRGFFESKKLEKVVELLHMMVQRDVSLD 591



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 138/488 (28%), Positives = 246/488 (50%), Gaps = 6/488 (1%)

Query: 224 SVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNV 283
           + +A + + +M      P + ++  +L    K     +   L  +M+  G SP+  T N+
Sbjct: 77  ATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNI 136

Query: 284 LITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG 343
           L+        + +   ++  +L+ G      +Y  +I G   +  + +A  L   M   G
Sbjct: 137 LLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLG 196

Query: 344 VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK------NVIPDIISYNTLLYGYCRSG 397
             P   TY  L+ GLC+ G +S A     EML        N  P +ISY+ ++   C+  
Sbjct: 197 CTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDR 256

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
              EA  LF+E++ + + PTV++Y +LI G C  G  E A++L   M+NQG+ P+V+T+ 
Sbjct: 257 REDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFN 316

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
           ++++  CK G +  A++    M+++G+ P+   Y + I G   +GD + A  L   M +K
Sbjct: 317 VLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSK 376

Query: 518 GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
           G  PD+I Y VL++G CK   +EEA +L   M+  G  PD  TY +++    + G +   
Sbjct: 377 GCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDA 436

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
           + LF  M   G+   L  Y + ++     G L  A   F++++   I+ ++  +N LI+G
Sbjct: 437 KKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDG 496

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           LC+  +++ A+ LF  + +E + P+  TY I+I+E C  G   +A  L+++M      PD
Sbjct: 497 LCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPD 556

Query: 698 YCTHSALL 705
             T++ L+
Sbjct: 557 KITYATLI 564



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 131/408 (32%), Positives = 221/408 (54%), Gaps = 6/408 (1%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVL-RDNGFSVKAREVYRMMGE---FGI--KPS 242
           + +  L+F +M + G  P+      ++K L R    S+  +    M+ +   +GI  KP 
Sbjct: 182 ISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPV 241

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +++Y+ ++D+ CK+    EA +L  EM+ +G +P  ++Y  LI GF   G+ E+A+ L  
Sbjct: 242 VISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFN 301

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M+  G++ +  ++N +I    ++G ++EA +L E M+ RG+ P L TYN LI G C  G
Sbjct: 302 EMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVG 361

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            ++ AR  F  M  K   PD+I Y  L+ GYC++  + EA  L++ +      P V TY 
Sbjct: 362 DLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYG 421

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            L+ GL + G +  A++L   M   GI  D+  Y I +NG CK G L  A E FN++   
Sbjct: 422 ALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSY 481

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
            ++ D   +   I G  K G    A+ L E++  +   PD++TYN+++H  C+ G + +A
Sbjct: 482 NIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKA 541

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
           N L +KM  +G  PD ITY ++I    E   L +  +L + M+++ +S
Sbjct: 542 NILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVS 589



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 137/441 (31%), Positives = 223/441 (50%), Gaps = 6/441 (1%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
           L++LL      + V + L V   +LR G +PD+     +IK L       KA  ++  M 
Sbjct: 134 LNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQ 193

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM------QGRGCSPNGVTYNVLITGFS 289
           + G  P+ +TY T++   C+ G +  AL+L  EM       G    P  ++Y+++I    
Sbjct: 194 KLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALC 253

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           ++   ++AR L  +M   G+  +  SY  +I G+   G   EA  L  EMV +GV P + 
Sbjct: 254 KDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVV 313

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           T+N+LI  LCK G+V +A+     M+++ ++P++++YN+L+ G+C  G++  A  LF  +
Sbjct: 314 TFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSM 373

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
            S+   P V+ Y  LI+G C+   +E A +L   M+  G  PDV TY  ++ G  + G +
Sbjct: 374 PSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKV 433

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A++ F  M   G+  D + Y   + G  K G   EA  L  ++ +     D+  +N L
Sbjct: 434 GDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCL 493

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           + GLCK G LE A EL  K+  +   PD +TY  +IH     G + +   LF  M + G 
Sbjct: 494 IDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGC 553

Query: 590 SPTLVTYTVLIHAHAARGRLE 610
           +P  +TY  LI       +LE
Sbjct: 554 TPDKITYATLIRGFFESKKLE 574



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 161/298 (54%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           E+   +FN+M+  G+ P+V   N +I VL   G  ++A+++  +M + GI P+++TYN++
Sbjct: 294 EEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSL 353

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           ++ FC  G++  A EL   M  +GC P+ + Y VLI G+ +  ++E+A  L   ML++G 
Sbjct: 354 IEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGK 413

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
           +    +Y  ++ G  + G + +A  L   M   G+   L  Y I + GLCK G + +A  
Sbjct: 414 RPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAME 473

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
            F ++   N+  DI  +N L+ G C++G +  A+ LF++L    L P VVTYN +I   C
Sbjct: 474 LFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFC 533

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           R G +  A  L + M   G  PD ITY  ++ G  +   L    E  + M+++ +  D
Sbjct: 534 RGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLD 591



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 137/251 (54%), Gaps = 8/251 (3%)

Query: 463 SCKMGNLS--MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
           +CK GN++   A +FF+ M+     P   ++T  ++G  K+   S+ + L  +M   G  
Sbjct: 69  NCKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGIS 128

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           PD  T N+L++ LC +  + E   ++  ++  G+IPD +TYT++I        + +   L
Sbjct: 129 PDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALL 188

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM----QVKGI--RPNVITYNAL 634
           F  M + G +P  +TY  L+      G + +A     EM     + GI  +P VI+Y+ +
Sbjct: 189 FTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSII 248

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           I+ LC+ RR D+A  LF +M+ +G+ P   +YT LI+  C  G W+EA RL+ EM+++ +
Sbjct: 249 IDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGV 308

Query: 695 EPDYCTHSALL 705
           +P+  T + L+
Sbjct: 309 QPNVVTFNVLI 319



 Score = 41.6 bits (96), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 68/157 (43%), Gaps = 14/157 (8%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G+  D +++   L  L ++G L  A  +   +   N+               + I+  + 
Sbjct: 447 GIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIK--------------LDIECFNC 492

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+    K   +E    +F K+ +  L PDV   N +I      G  VKA  +++ M + G
Sbjct: 493 LIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNG 552

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCS 275
             P  +TY T++  F +  ++++ +ELL  M  R  S
Sbjct: 553 CTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVS 589


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 183/658 (27%), Positives = 305/658 (46%), Gaps = 53/658 (8%)

Query: 90  PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVET 149
           P+ ++++L +  + P  AL  F  V   PG     +VF  IL+ L +  L+  AY     
Sbjct: 10  PKRVIKLL-KSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHAYAKNSM 68

Query: 150 V-----VCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGL 204
                 +   MH I      G      S   L   L+   K    E   L F  M   GL
Sbjct: 69  PDQALDIFQRMHEIF-----GCQPGIRSYNSLLNALIESNKWDEAESFFLYFETM---GL 120

Query: 205 LPDVKNCNRIIKV-LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEAL 263
            P+++  N +IK+  R   F  KA+E+   M   G  P + +Y T+++S  K G M +AL
Sbjct: 121 SPNLQTYNILIKISCRKKQFD-KAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDAL 179

Query: 264 ELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH--SYNPIIC 321
           +L  EM  RG +P+   YN+LI GF + G++  A  +   +LK G  V  +  SYN +I 
Sbjct: 180 KLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLK-GPSVYPNIPSYNVMIN 238

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           G  + G   E+  +   M        L TY+ LI+GLC  G +  A   + EM    V P
Sbjct: 239 GLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSP 298

Query: 382 DIISYNTLLYGYCRSGNI----------------------------------GEAFLLFD 407
           D++ YNT+L GY R+G I                                   EA  +++
Sbjct: 299 DVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWE 358

Query: 408 ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG 467
            L  ++     +TY  L+ GLC+ G L  A  + E   N     D   Y+ M+NG C+ G
Sbjct: 359 LLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREG 418

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
            L       ++M + G +P+ +     I G ++     +A R    M++KG  P ++TYN
Sbjct: 419 RLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYN 478

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
            L++GL K     EA  L+++M+  G+ P+ ITY+ +++   +   L    +L+   L K
Sbjct: 479 TLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEK 538

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
           G  P +  + ++IH   + G++E A   +SEM+ +   PN++T+N L+ G  ++R  ++A
Sbjct: 539 GFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERA 598

Query: 648 YGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             ++  + + G+ P+  +Y I +   C+     +A+    + +DR + P   T + L+
Sbjct: 599 SKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILV 656



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 163/658 (24%), Positives = 291/658 (44%), Gaps = 74/658 (11%)

Query: 49  VLNPESESYYKELIISTVEEKPWAFCNNRWVSDHFQAVVSDPELLVRVLNRIREKPRIAL 108
           +L  E   +    I  +V   P  + +  +V  H    + DP+L+     +    P  AL
Sbjct: 16  LLKSEKNPHSALSIFDSVTRFP-GYSHTPYVFHHILKRLFDPKLVAHAYAK-NSMPDQAL 73

Query: 109 RFFRWVE----TQPGVKRDEFVFCTILEILIESGLLRSA------------------YWV 146
             F+ +      QPG++     + ++L  LIES     A                  Y +
Sbjct: 74  DIFQRMHEIFGCQPGIRS----YNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNI 129

Query: 147 VETVVCVNMH-----GILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLR 201
           +  + C          +L+ + G G S    +     L+    K   +   L +F++M  
Sbjct: 130 LIKISCRKKQFDKAKELLNWMWGQGFSP--DVFSYGTLINSLAKNGYMSDALKLFDEMPE 187

Query: 202 NGLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMGEFGIKPSIVTYNTMLDSFCKEGEMQ 260
            G+ PDV   N +I      G  + A E++ R++    + P+I +YN M++  CK G+  
Sbjct: 188 RGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFD 247

Query: 261 EALELLW------------------------------------EMQGRGCSPNGVTYNVL 284
           E+ E+ W                                    EM   G SP+ V YN +
Sbjct: 248 ESFEI-WHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTM 306

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           + G+ R G +E+   L + M K G +    SYN +I G  E   + EA+++ E +  +  
Sbjct: 307 LNGYLRAGRIEECLELWKVMEKEGCRTVV-SYNILIRGLFENAKVDEAISIWELLPEKDC 365

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
                TY +L++GLCK G ++ A     E        D  +Y++++ G CR G + E   
Sbjct: 366 CADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAG 425

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
           + D++      P     N +I+G  R   LE A +   NM+++G  P V+TY  ++NG  
Sbjct: 426 VLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLS 485

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
           K    S A     EML+KG +P+   Y+  + G  +      A  L  + L KGF PD+ 
Sbjct: 486 KAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVK 545

Query: 525 TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM 584
            +N+++HGLC  G +E+A +L  +M     +P+ +T+ +++    ++ D  R   +++++
Sbjct: 546 MHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHI 605

Query: 585 LRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
           L+ GL P +++Y + +    +  R+  A  + ++   +G+ P  IT+N L+ G   L+
Sbjct: 606 LQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGYLALK 663



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 1/165 (0%)

Query: 564 IIHASLEMGDLRRGRDLFNNMLRK-GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
           + HA  +     +  D+F  M    G  P + +Y  L++A     + + A  +F   +  
Sbjct: 59  VAHAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETM 118

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
           G+ PN+ TYN LI   CR ++ D+A  L   M  +G  P+ ++Y  LIN     G   +A
Sbjct: 119 GLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDA 178

Query: 683 LRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLG 727
           L+L+ EM +R + PD   ++ L+     K   ++A E  E L  G
Sbjct: 179 LKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKG 223


>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
          Length = 698

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 164/516 (31%), Positives = 253/516 (49%), Gaps = 44/516 (8%)

Query: 202 NGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV-TYNT--MLDSFCKEGE 258
           +G LPD  +CN ++++L +     +AR +Y   GE  ++      Y+T  M+   C EG 
Sbjct: 40  HGALPDAPDCNCLLRLLVERRRWERARGLY---GEMLVREGGADDYSTCVMVRGLCLEGR 96

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           ++E   L+    G GC P  V YNVLI G+ R G++ +   L+ +M   G+  +  +Y  
Sbjct: 97  VEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGA 156

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           II     KG L +  +L  EM  RG++P +  YN +I  LCK    S A     +M++  
Sbjct: 157 IIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSR 216

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
             PD++++NT++ G+CR G++ EA  L  E   R L P  ++Y  LI G C  G+  VA 
Sbjct: 217 FNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVAS 276

Query: 439 QLKENMINQGILPDVIT-----------------------------------YTIMVNGS 463
            L   M+ +G  PD+IT                                   Y ++++G 
Sbjct: 277 DLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGL 336

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
           CK   LS A+    EML + +QPD+F YTT I G ++    S+A ++ E M  K   PD+
Sbjct: 337 CKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKAC-PDI 395

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
           + YNV++ G CK G ++EA   +  M   G IPD  TYT+++    + GD+     L  +
Sbjct: 396 VAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCD 455

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           M+++   P + TY  LI  +   G    A   F++MQ +G+ PNV+ Y  LI  L +  +
Sbjct: 456 MMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDK 515

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINE--NCNAG 677
           + QA   F  M      PN  T   L+N   NC  G
Sbjct: 516 VIQAAAYFEHMLLNHCPPNDATVHYLVNGLVNCRHG 551



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 161/550 (29%), Positives = 267/550 (48%), Gaps = 31/550 (5%)

Query: 157 GILDVLIGGGLSSCVSIKIL-DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRII 215
           G+++   G G   CV   +  ++L+  Y ++  + + LL+  +M   G++P V     II
Sbjct: 102 GLIEARWGEG---CVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAII 158

Query: 216 KVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCS 275
             L   G   K   +   M   G+ P++  YNT++++ CK     +A ++L +M     +
Sbjct: 159 HWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFN 218

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           P+ VT+N +I GF R G++ +A  L+R+ ++ GL+ +  SY P+I G+  +G  + A +L
Sbjct: 219 PDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDL 278

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
             EM+ RG  P + T   LI+GL   G+V+DA     +M  + V+PD   YN L+ G C+
Sbjct: 279 LVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCK 338

Query: 396 SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
              +  A  L +E+  + + P    Y TLIDG  R   L  A+++ E M  +   PD++ 
Sbjct: 339 KRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFM-EEKACPDIVA 397

Query: 456 YTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML 515
           Y +M+ G CK G +  A    + M + G  PD F YTT + G  K GD S + RL  +M+
Sbjct: 398 YNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMM 457

Query: 516 AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLR 575
            +   P++ TY  L+ G C +G    A +L  KM  +G  P+ + YT +I +  +   + 
Sbjct: 458 KRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVI 517

Query: 576 RGRDLFNNMLRKGLSPTLVTYTVLI-------------------HAHAARGRLELAFMYF 616
           +    F +ML     P   T   L+                    AH     L++    F
Sbjct: 518 QAAAYFEHMLLNHCPPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAHEKSALLDV----F 573

Query: 617 SEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI---NEN 673
             +   G+ P +  YNA+I  LCR   + +A  L   M  +G LP+  T+  L+   +  
Sbjct: 574 RGLISDGLDPRISAYNAIIFSLCRHNMLGKAMDLKDKMSNKGCLPDPITFLSLLYGFSSA 633

Query: 674 CNAGNWQEAL 683
             +G W+ AL
Sbjct: 634 GESGKWRSAL 643



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 140/467 (29%), Positives = 224/467 (47%), Gaps = 1/467 (0%)

Query: 260 QEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI 319
           + A  L  EM  R    +  +  V++ G    G +E+ RGLI      G    A  YN +
Sbjct: 63  ERARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVL 122

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           I GY  +G +   L L  EM T+G+ PT+ TY  +I+ L + G ++       EM  + +
Sbjct: 123 IDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGL 182

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
            P++  YNT++   C+  +  +A  + +++      P VVT+NT+I G CR GD+  A +
Sbjct: 183 SPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALK 242

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           L    I +G+ P+ ++YT +++G C  G   +A +   EM+ +G  PD       I G +
Sbjct: 243 LLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLV 302

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
             G  ++A  ++E+M  +   PD   YNVL+ GLCK   L  A  LL +M+     PD  
Sbjct: 303 VSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKF 362

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
            YT++I   +    L   R +F  M  K   P +V Y V+I  +   G ++ A    S M
Sbjct: 363 IYTTLIDGFVRSDKLSDARKIFEFMEEKA-CPDIVAYNVMIKGYCKFGMMKEAVTCMSSM 421

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
           +  G  P+  TY  L++G  +   I  +  L  DM +    PN +TY  LI   CN G+ 
Sbjct: 422 RKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDT 481

Query: 680 QEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
             A  L+ +M    + P+   ++ L+     KD  + A  Y E + L
Sbjct: 482 YSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLL 528



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 135/494 (27%), Positives = 214/494 (43%), Gaps = 86/494 (17%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +  +M   GL P+V+  N +I  L     + +A ++   M +    P +VT+NTM+  FC
Sbjct: 173 LLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFC 232

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA---------RGLIRDML 305
           +EG+++EAL+LL E   RG  PN ++Y  LI GF   GE   A         RG   DM+
Sbjct: 233 REGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMI 292

Query: 306 KLGLKV--------------------------SAHSYNPIICGYSEKGLLVEALNLEEEM 339
            LG  +                           A+ YN +I G  +K +L  A NL EEM
Sbjct: 293 TLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEM 352

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
           + + V P    Y  LI G  +  ++SDAR + FE + +   PDI++YN ++ GYC+ G +
Sbjct: 353 LEQKVQPDKFIYTTLIDGFVRSDKLSDAR-KIFEFMEEKACPDIVAYNVMIKGYCKFGMM 411

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
            EA      +R    +P   TY TL+DG  + GD+  + +L  +M+ +   P++ TY  +
Sbjct: 412 KEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASL 471

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML---- 515
           + G C +G+   A + F +M  +GL P+   YT  I    K     +A    E ML    
Sbjct: 472 ICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHC 531

Query: 516 ----------------------------------------------AKGFPPDLITYNVL 529
                                                         + G  P +  YN +
Sbjct: 532 PPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYNAI 591

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           +  LC+   L +A +L  KM   G +PD IT+ S+++     G+  + R    N  ++  
Sbjct: 592 IFSLCRHNMLGKAMDLKDKMSNKGCLPDPITFLSLLYGFSSAGESGKWRSALPNEFQQDE 651

Query: 590 SPTLVTYTVLIHAH 603
              +  Y  L + H
Sbjct: 652 FEIITKYMALFNQH 665



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 174/345 (50%), Gaps = 4/345 (1%)

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
           W R   AR  + EML +    D  S   ++ G C  G + E   L +       VP  V 
Sbjct: 62  WER---ARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVF 118

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YN LIDG CR GD+     L   M  +GI+P V+TY  +++   + G+L+       EM 
Sbjct: 119 YNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMR 178

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            +GL P+   Y T I    K    S+A  +  +M+   F PD++T+N ++ G C+ G + 
Sbjct: 179 ARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVR 238

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA +LLR+ +  G  P+ ++YT +IH     G+     DL   M+ +G +P ++T   LI
Sbjct: 239 EALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALI 298

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
           H     G++  A +   +M  + + P+   YN LI+GLC+ R +  A  L  +M E+ + 
Sbjct: 299 HGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQ 358

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           P+K+ YT LI+    +    +A +++ E ++ +  PD   ++ ++
Sbjct: 359 PDKFIYTTLIDGFVRSDKLSDARKIF-EFMEEKACPDIVAYNVMI 402



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 72/337 (21%), Positives = 126/337 (37%), Gaps = 75/337 (22%)

Query: 120 VKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLL 179
           V+ D+F++ T+++  + S  L  A  + E +                  +C  I   +++
Sbjct: 357 VQPDKFIYTTLIDGFVRSDKLSDARKIFEFME---------------EKACPDIVAYNVM 401

Query: 180 LLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG-FSVKAREVYRMMGEFG 238
           +  Y K  M+++ +   + M + G +PD      ++      G  S   R +  MM +  
Sbjct: 402 IKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMM-KRR 460

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG------------------------- 273
            KP+I TY +++  +C  G+   A +L  +MQ  G                         
Sbjct: 461 CKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAA 520

Query: 274 ----------CSPNGVTYNVLITGF---------SRNGELEQA----------RGLIRDM 304
                     C PN  T + L+ G          S   + +QA          RGLI D 
Sbjct: 521 AYFEHMLLNHCPPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISD- 579

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
              GL     +YN II       +L +A++L+++M  +G  P   T+  L+YG    G  
Sbjct: 580 ---GLDPRISAYNAIIFSLCRHNMLGKAMDLKDKMSNKGCLPDPITFLSLLYGFSSAGES 636

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
              R       +++    I  Y  L   +  S  +GE
Sbjct: 637 GKWRSALPNEFQQDEFEIITKYMALFNQHVTSSVVGE 673


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  252 bits (644), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 160/531 (30%), Positives = 253/531 (47%), Gaps = 30/531 (5%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK-VLRDNGFSVKAREVYRMMGEFGIKPSI 243
           + S+  + +   ++M  N  +P+V     ++   L+   F    R +  MM E G  P+ 
Sbjct: 283 EASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTE-GCNPNP 341

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL--- 300
             +N+++  +C  G+   A +L   M   G  P  V YN+ I       EL  A  L   
Sbjct: 342 SLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLV 401

Query: 301 ---IRDMLKLGL---KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
                +ML       KV+  +++  +CG    G   +A  + +EM+ +G  P  +TY  +
Sbjct: 402 EKVYEEMLAASCVLNKVNTANFSRCLCGV---GKFEKAFQILKEMMRKGFVPDTSTYTKV 458

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           I  LC+  +V  +   F EM R  V PD+ +Y  L+  +C++G I +A   FDE+RS   
Sbjct: 459 ITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGC 518

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P VVTY  L+    +   L  A  +   M++    P+ +TY+ +++G CK G +  A E
Sbjct: 519 SPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACE 578

Query: 475 FFNEMLRKG----------------LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
            + +++                   + P+   Y   I G  K    S+A+ L + MLA G
Sbjct: 579 VYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAG 638

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
             P+ I Y+ L+ G CK+G ++ A E+  +M   G++P   TYTS+I    + G L    
Sbjct: 639 CEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAM 698

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
            + + ML    +P +VTYT +I   +  G +E A    S M+ KG  PNV+TY ALI+GL
Sbjct: 699 KVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGL 758

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
            +  + D +  LF  M  +G  PN  TY +LIN  C AG   EA  L  EM
Sbjct: 759 GKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEM 809



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 177/691 (25%), Positives = 287/691 (41%), Gaps = 103/691 (14%)

Query: 104 PRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLI 163
           P + +RFF W E Q G       +  + EIL      R+A  ++  +             
Sbjct: 114 PELCVRFFLWAERQVGYSHTGACYDALAEILGFEDPARTAERLLREI------------- 160

Query: 164 GGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGF 223
            G     V  ++L++L+    +  + ++ L    ++   G  P     N +++VL   G 
Sbjct: 161 -GEDDREVLRRLLNVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQ 219

Query: 224 SVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE------------------------- 258
                 V + M   G      T      + CK G                          
Sbjct: 220 VEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMIS 279

Query: 259 -------MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKV 311
                    EA+  L  M+   C PN VTY  L++GF +  +    + +I  M+  G   
Sbjct: 280 GLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNP 339

Query: 312 SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG-------------- 357
           +   +N ++ GY   G    A  L   M T G  P    YNI I                
Sbjct: 340 NPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLD 399

Query: 358 ---------------------------LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
                                      LC  G+   A     EM+RK  +PD  +Y  ++
Sbjct: 400 LVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVI 459

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
              C++  + ++FLLF E++   + P V TY  LID  C+ G +E A+   + M + G  
Sbjct: 460 TFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCS 519

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
           P+V+TYT +++   K   L  A + F+ M+     P+   Y+  I G  K G+  +A  +
Sbjct: 520 PNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEV 579

Query: 511 QEEMLAKG----------------FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
            E+++                     P+++TY  L+ GLCK   + +A+ELL  M+  G 
Sbjct: 580 YEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGC 639

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            P+ I Y ++I    ++G +   +++F  M + G  P++ TYT LI      GRL+LA  
Sbjct: 640 EPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMK 699

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
             SEM      PNV+TY A+I+GL ++  I++A  L   MEE+G  PN  TYT LI+   
Sbjct: 700 VLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLG 759

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             G    +L+L+K+M  +   P+Y T+  L+
Sbjct: 760 KTGKADASLKLFKQMNSKGCAPNYVTYRVLI 790



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 172/641 (26%), Positives = 292/641 (45%), Gaps = 76/641 (11%)

Query: 112 RWVETQPGVKRDEF----VFCT-ILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           RW +    +++++F    V CT ++  L+E+ L   A   +  + C              
Sbjct: 254 RWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRC-------------- 299

Query: 167 LSSCV-SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSV 225
            +SC+ ++     LL  + KK     C  + N M+  G  P+    N ++    + G   
Sbjct: 300 -NSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYA 358

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA--LELLWEMQGRGCSPNGVTYNV 283
            A +++  M   G  P  V YN  + S C + E+  A  L+L+ ++     + + V   V
Sbjct: 359 YAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKV 418

Query: 284 LITGFSRN----GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
               FSR     G+ E+A  ++++M++ G      +Y  +I    +   + ++  L +EM
Sbjct: 419 NTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEM 478

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
              GV P + TY ILI   CK G +  AR  F EM      P++++Y  LL+ Y +S  +
Sbjct: 479 KRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQL 538

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG----------- 448
            +A  +F  +      P  VTY+ LIDGLC+ G+++ A ++ E +I              
Sbjct: 539 IQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEG 598

Query: 449 -----ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
                I P+V+TY  +++G CK   +S A E  + ML  G +P++  Y   I G  K+G 
Sbjct: 599 NDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGK 658

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
              A  +   M   G+ P + TY  L+  + K G L+ A ++L +M+ D   P+ +TYT+
Sbjct: 659 IDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTA 718

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           +I    ++G++ +  +L + M  KG SP +VTYT LI      G+ + +   F +M  KG
Sbjct: 719 MIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKG 778

Query: 624 IRPNVITYNALINGLCRLRRIDQAY---------------------------------GL 650
             PN +TY  LIN  C    +D+A+                                 GL
Sbjct: 779 CAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGL 838

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
             +ME    +P    Y +LI+    AG  + AL L+KE+++
Sbjct: 839 LEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVE 879



 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 153/516 (29%), Positives = 254/516 (49%), Gaps = 23/516 (4%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           E+   +  +M+R G +PD     ++I  L       K+  +++ M   G+ P + TY  +
Sbjct: 434 EKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTIL 493

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           +DSFCK G +++A     EM+  GCSPN VTY  L+  + ++ +L QA  +   M+    
Sbjct: 494 IDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAAC 553

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMV----------------TRGVAPTLATYNI 353
             +A +Y+ +I G  + G + +A  + E+++                T  +AP + TY  
Sbjct: 554 YPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGA 613

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           LI GLCK  +VSDA      ML     P+ I Y+ L+ G+C+ G I  A  +F  +    
Sbjct: 614 LIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCG 673

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
            +P+V TY +LID + + G L++A ++   M+N    P+V+TYT M++G  K+G +  A 
Sbjct: 674 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKAL 733

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
              + M  KG  P+   YT  I G  K G    + +L ++M +KG  P+ +TY VL++  
Sbjct: 734 NLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHC 793

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHIT-YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           C  G L+EA+ LL +M    + P H+  Y   +    +      G  L   M      P 
Sbjct: 794 CAAGLLDEAHLLLDEMKHTHW-PKHLQGYHCAVQGFSKKFIASLG--LLEEMESHETVPI 850

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT---YNALINGLCRLRRIDQAYG 649
              Y +LI + +  GRLE A     E+       N+ +   Y +LI  LC   ++++A+ 
Sbjct: 851 APVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFT 910

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           L+ +M  +GI+P+   +  L+        W EAL+L
Sbjct: 911 LYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQL 946



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 133/498 (26%), Positives = 223/498 (44%), Gaps = 50/498 (10%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +L+  + K  ++EQ    F++M   G  P+V     ++     +   ++A +++  M + 
Sbjct: 492 ILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDA 551

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG----------------CSPNGVTY 281
              P+ VTY+ ++D  CK GE+Q+A E+  ++ G                   +PN VTY
Sbjct: 552 ACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTY 611

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
             LI G  +  ++  A  L+  ML  G + +   Y+ +I G+ + G +  A  +   M  
Sbjct: 612 GALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTK 671

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
            G  P++ TY  LI  + K GR+  A     EML  +  P++++Y  ++ G  + G I +
Sbjct: 672 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEK 731

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           A  L   +  +   P VVTY  LIDGL + G  + + +L + M ++G  P+ +TY +++N
Sbjct: 732 ALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLIN 791

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
             C  G L  A    +EM           Y   + G  K    S    L EEM +    P
Sbjct: 792 HCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLG--LLEEMESHETVP 849

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
               Y +L+    K G LE A EL +++V              + +SL            
Sbjct: 850 IAPVYGMLIDSFSKAGRLETALELHKELVE-------------VSSSL------------ 884

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
            NM   G+      Y  LI A     ++E AF  ++EM  KGI P++I + +L+ GL  +
Sbjct: 885 -NMTSTGM------YASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEV 937

Query: 642 RRIDQAYGLFIDMEEEGI 659
            + D+A  L      EG+
Sbjct: 938 NKWDEALQLCYGRCHEGV 955



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 151/372 (40%), Gaps = 44/372 (11%)

Query: 387 NTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMIN 446
           N L+   CR G   EA      L+     P+ VTYN L+  L   G +E+  ++++ M  
Sbjct: 173 NVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSA 232

Query: 447 QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSE 506
            G   D  T        CK+G  + A    N + ++    D    T  I+G ++    +E
Sbjct: 233 SGFCMDRSTIGYFAQALCKVGRWADA---LNMLEKEDFNLDTVLCTQMISGLMEASLFNE 289

Query: 507 AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
           A      M      P+++TY  L+ G  K         ++  M+ +G  P+   + S++H
Sbjct: 290 AMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVH 349

Query: 567 ASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAAR-------------------- 606
                GD      LFN M   G  P  V Y + I +   +                    
Sbjct: 350 GYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEML 409

Query: 607 ---------------------GRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
                                G+ E AF    EM  KG  P+  TY  +I  LC+ ++++
Sbjct: 410 AASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVE 469

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +++ LF +M+  G+ P+ YTYTILI+  C AG  ++A   + EM      P+  T++ALL
Sbjct: 470 KSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALL 529

Query: 706 LKQLDKDYKVHA 717
              L     + A
Sbjct: 530 HAYLKSKQLIQA 541



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/387 (25%), Positives = 165/387 (42%), Gaps = 46/387 (11%)

Query: 128 CTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKIL-DLLLLIYTKK 186
           CTI   ++  G L       + V   + H +LD ++  G   C   +I+ D L+  + K 
Sbjct: 602 CTIAPNVVTYGALIDGLCKAQKVS--DAHELLDAMLAAG---CEPNQIVYDALIDGFCKI 656

Query: 187 SMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTY 246
             ++    VF +M + G LP V     +I  +  +G    A +V   M      P++VTY
Sbjct: 657 GKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTY 716

Query: 247 NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
             M+D   K GE+++AL LL  M+ +GCSPN VTY  LI G  + G+ +           
Sbjct: 717 TAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADA---------- 766

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
                                    +L L ++M ++G AP   TY +LI   C  G + +
Sbjct: 767 -------------------------SLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDE 801

Query: 367 ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
           A     EM   +    +  Y+  + G+  S     +  L +E+ S   VP    Y  LID
Sbjct: 802 AHLLLDEMKHTHWPKHLQGYHCAVQGF--SKKFIASLGLLEEMESHETVPIAPVYGMLID 859

Query: 427 GLCRYGDLEVAQQLKENMINQGILPDVIT---YTIMVNGSCKMGNLSMAREFFNEMLRKG 483
              + G LE A +L + ++      ++ +   Y  ++   C    +  A   + EM RKG
Sbjct: 860 SFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKG 919

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRL 510
           + PD   + + + G +++    EA +L
Sbjct: 920 IVPDLIVFVSLVKGLIEVNKWDEALQL 946


>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
 gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
          Length = 768

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 141/497 (28%), Positives = 260/497 (52%), Gaps = 3/497 (0%)

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG---CSPNGVTYNVLITGF 288
           R M EFG   ++++YN +L   C E   +EALEL+  M   G    +PN VTY  +I G 
Sbjct: 153 RRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDGL 212

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
            +   +++A+G+ + M+  G++ + H+Y  +I GY   G   E + + +EM T G+ P  
Sbjct: 213 CKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDC 272

Query: 349 ATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDE 408
             Y +L+  LCK GR ++AR+ F  ++RK + P +  Y  LL+GY   G + E     D 
Sbjct: 273 VIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDL 332

Query: 409 LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
           +    + P    +N + +   +   ++ A  + + M  Q + P V+ Y  +++  CK+G 
Sbjct: 333 MVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGR 392

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
           +  A   FN+M+ +G+ PD F +++ + G   +    +A +L  E+L +G   +   +N+
Sbjct: 393 VDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNI 452

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           L+  LC+ G + EA  L+  M+     PD I+Y +++      G +     L + M+  G
Sbjct: 453 LMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIG 512

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
           L P   TY  L+H +    R++ A+  F EM +KG+ P V+TYN +++GL ++ R  +A 
Sbjct: 513 LKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAK 572

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQ 708
            L+++M       + YTYTI++N  C      EA ++++ +  ++++ D  T + ++   
Sbjct: 573 ELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGAL 632

Query: 709 LDKDYKVHAVEYLESLT 725
           L    K  A++   +++
Sbjct: 633 LKGGRKEDAMDLFATIS 649



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 150/489 (30%), Positives = 246/489 (50%), Gaps = 6/489 (1%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF---GIKP 241
           K  MV++   VF  M+  G+ P+      +I      G   K +EV +M+ E    G++P
Sbjct: 214 KAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTG---KWKEVVQMLQEMSTHGLQP 270

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
             V Y  +LD  CK G   EA  +   +  +G  P+   Y +L+ G++  G L +    +
Sbjct: 271 DCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFL 330

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
             M++ G+    H +N +   Y++K ++ EA+++ ++M  + ++P +  Y  LI  LCK 
Sbjct: 331 DLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKL 390

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           GRV DA  +F +M+ + V PDI  +++L+YG C      +A  LF E+  + +      +
Sbjct: 391 GRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFF 450

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           N L+  LCR G +  AQ+L + M+   + PDVI+Y  +V+G C  G +  A +  + M+ 
Sbjct: 451 NILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVS 510

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
            GL+PD F Y T + G  K     +AY L  EML KG  P ++TYN ++HGL ++G   E
Sbjct: 511 IGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCE 570

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A EL   M+ +    D  TYT I++       +     +F ++  K L   + T  ++I 
Sbjct: 571 AKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIG 630

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
           A    GR E A   F+ +   G+ P+V TY  +   L +   +++   LF  MEE G  P
Sbjct: 631 ALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAP 690

Query: 662 NKYTYTILI 670
           N      L+
Sbjct: 691 NSRMLNALV 699



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 163/629 (25%), Positives = 272/629 (43%), Gaps = 116/629 (18%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY----RMMGEFGIK--PS 242
           ++  L +F++ML       V+  NR++ V+     S  +  V     RM+ E  +K  PS
Sbjct: 32  LDDALKLFDEMLTYARPASVRTFNRLLTVVSRARCSSASELVVSLFNRMIRECSVKVAPS 91

Query: 243 IVTYNTMLDSFCKEGEMQEALE-------------------------------------L 265
             TY  ++  FC+ G ++                                         L
Sbjct: 92  SCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATDIL 151

Query: 266 LWEMQGRGCSPNGVTYNVL--------------------------------------ITG 287
           L  M   GC+ N ++YN+L                                      I G
Sbjct: 152 LRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDG 211

Query: 288 FSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPT 347
             +   +++A+G+ + M+  G++ + H+Y  +I GY   G   E + + +EM T G+ P 
Sbjct: 212 LCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPD 271

Query: 348 LATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN--------- 398
              Y +L+  LCK GR ++AR+ F  ++RK + P +  Y  LL+GY   G          
Sbjct: 272 CVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLD 331

Query: 399 --------------------------IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
                                     I EA  +FD++R + L P VV Y  LID LC+ G
Sbjct: 332 LMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLG 391

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
            ++ A      MIN+G+ PD+  ++ +V G C +     A + F E+L +G++ +   + 
Sbjct: 392 RVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFN 451

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
             +    + G   EA RL + ML     PD+I+YN LV G C  G ++EA +LL  MV  
Sbjct: 452 ILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSI 511

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
           G  PD  TY +++H   +   +     LF  ML KGL+P +VTY  ++H     GR   A
Sbjct: 512 GLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEA 571

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
              +  M     + ++ TY  ++NGLCR   +D+A+ +F  +  + +  + +T  I+I  
Sbjct: 572 KELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGA 631

Query: 673 NCNAGNWQEALRLYKEMLDREIEPDYCTH 701
               G  ++A+ L+  +    + PD  T+
Sbjct: 632 LLKGGRKEDAMDLFATISAYGLVPDVETY 660



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 144/494 (29%), Positives = 242/494 (48%), Gaps = 14/494 (2%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G++ D  ++  +L+ L ++G             C     I D LI  G+   V+I    +
Sbjct: 267 GLQPDCVIYAVLLDYLCKNGR------------CTEARNIFDSLIRKGIKPHVTI--YGI 312

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL  Y  +  + +     + M+RNG+ PD    N +           +A  ++  M +  
Sbjct: 313 LLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQW 372

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           + P +V Y  ++D+ CK G + +A+    +M   G +P+   ++ L+ G     + E+A 
Sbjct: 373 LSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAE 432

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L  ++L  G++++A  +N ++C    +G ++EA  L + M+   V P + +YN L+ G 
Sbjct: 433 KLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGH 492

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C  GR+ +A      M+   + PD  +YNTLL+GYC++  I +A+ LF E+  + L P V
Sbjct: 493 CLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGV 552

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           VTYNT++ GL + G    A++L  NMIN     D+ TYTI++NG C+   +  A + F  
Sbjct: 553 VTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQS 612

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           +  K LQ D F     I   LK G   +A  L   + A G  PD+ TY ++   L K GS
Sbjct: 613 LCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGS 672

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           LEE +EL   M  +G  P+     +++   L  GD+ R     + +  K  S    T ++
Sbjct: 673 LEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSM 732

Query: 599 LIHAHAARGRLELA 612
           LI  ++     +LA
Sbjct: 733 LISIYSRAEYQQLA 746



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 144/525 (27%), Positives = 237/525 (45%), Gaps = 46/525 (8%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLD--SFCKEGEMQEALELLWEMQGRGCS----PNGVT 280
           A +++  M  +    S+ T+N +L   S  +     E +  L+    R CS    P+  T
Sbjct: 35  ALKLFDEMLTYARPASVRTFNRLLTVVSRARCSSASELVVSLFNRMIRECSVKVAPSSCT 94

Query: 281 YNVLITGFSRNGELEQ---ARGLI----------------------------------RD 303
           Y +LI  F R G L+    A GLI                                  R 
Sbjct: 95  YTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATDILLRR 154

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA---PTLATYNILIYGLCK 360
           M + G  ++  SYN ++ G   +    EAL L   M   G     P + TY  +I GLCK
Sbjct: 155 MPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDGLCK 214

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
              V  A+  F  M+ K V P+  +Y  L++GY  +G   E   +  E+ +  L P  V 
Sbjct: 215 AQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVI 274

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y  L+D LC+ G    A+ + +++I +GI P V  Y I+++G    G LS    F + M+
Sbjct: 275 YAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMV 334

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           R G+ PD   +        K     EA  + ++M  +   P ++ Y  L+  LCKLG ++
Sbjct: 335 RNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVD 394

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           +A     +M+ +G  PD   ++S+++    +    +   LF  +L +G+      + +L+
Sbjct: 395 DAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILM 454

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                 GR+  A      M    +RP+VI+YN L++G C   RID+A  L   M   G+ 
Sbjct: 455 CNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLK 514

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           P+++TY  L++  C A    +A  L++EML + + P   T++ +L
Sbjct: 515 PDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTIL 559



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 125/425 (29%), Positives = 206/425 (48%), Gaps = 15/425 (3%)

Query: 284 LITGFSRNGEL--EQARGLIRDMLKLGLKVSAHSYNPII-------CGYSEKGLLVEALN 334
           +I G +R+G L  + A  L  +ML      S  ++N ++       C  S   L+V   N
Sbjct: 20  VIAGRARSGSLGLDDALKLFDEMLTYARPASVRTFNRLLTVVSRARCS-SASELVVSLFN 78

Query: 335 LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN-VIPDIISYNTLLYGY 393
                 +  VAP+  TY ILI   C+ GR+      F  +L+    + + + +  LL G 
Sbjct: 79  RMIRECSVKVAPSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGL 138

Query: 394 CRSGNIGEAF-LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI--- 449
           C +  + EA  +L   +        V++YN L+ GLC     E A +L   M + G    
Sbjct: 139 CDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSH 198

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
            P+V+TYT +++G CK   +  A+  F  M+ KG++P+   YT  I G L  G   E  +
Sbjct: 199 TPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQ 258

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           + +EM   G  PD + Y VL+  LCK G   EA  +   ++  G  P    Y  ++H   
Sbjct: 259 MLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYA 318

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
             G L       + M+R G+SP    + ++ +A+A +  ++ A   F +M+ + + P V+
Sbjct: 319 TEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVV 378

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
            Y ALI+ LC+L R+D A   F  M  EG+ P+ + ++ L+   C    W++A +L+ E+
Sbjct: 379 NYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEV 438

Query: 690 LDREI 694
           LD+ I
Sbjct: 439 LDQGI 443



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 169/355 (47%), Gaps = 37/355 (10%)

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG--EAFLLFDELRSRNLVPTVVT 420
           RV+ A  R  E+ R            ++ G  RSG++G  +A  LFDE+ +     +V T
Sbjct: 6   RVTAAADRCLELER------------VIAGRARSGSLGLDDALKLFDEMLTYARPASVRT 53

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQ-------GILPDVITYTIMVNGSCKMGNLSMAR 473
           +N L+  + R      A +L  ++ N+        + P   TYTI++   C+MG L    
Sbjct: 54  FNRLLTVVSR-ARCSSASELVVSLFNRMIRECSVKVAPSSCTYTILIGCFCRMGRLKHGF 112

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE--EMLAKGFPP-----DLITY 526
             F  +L+ G   +     T I G+L L    +A R+ E  ++L +  P      ++I+Y
Sbjct: 113 AAFGLILKTGWSLN----NTVIFGQL-LKGLCDAKRVDEATDILLRRMPEFGCTLNVISY 167

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDG---FIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
           N+L+ GLC     EEA EL+  M  DG     P+ +TYT++I    +   + R + +F +
Sbjct: 168 NILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQH 227

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           M+ KG+ P   TYT LIH + + G+ +       EM   G++P+ + Y  L++ LC+  R
Sbjct: 228 MIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGR 287

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
             +A  +F  +  +GI P+   Y IL++     G   E       M+   + PD+
Sbjct: 288 CTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDH 342



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 114/260 (43%), Gaps = 12/260 (4%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV------YRMMGEFGIKPS 242
           +++   + + M+  GL PD    N ++     +G+  KAR +      +R M   G+ P 
Sbjct: 498 IDEAAKLLDVMVSIGLKPDEFTYNTLL-----HGY-CKARRIDDAYSLFREMLMKGLTPG 551

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +VTYNT+L    + G   EA EL   M       +  TY +++ G  RN  +++A  + +
Sbjct: 552 VVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQ 611

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            +    L++   + N +I    + G   +A++L   +   G+ P + TY ++   L K G
Sbjct: 612 SLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEG 671

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            + +    F  M      P+    N L+      G+IG A +   +L  +N      T +
Sbjct: 672 SLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTS 731

Query: 423 TLIDGLCRYGDLEVAQQLKE 442
            LI    R    ++A+ L E
Sbjct: 732 MLISIYSRAEYQQLAKSLPE 751


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 141/445 (31%), Positives = 234/445 (52%), Gaps = 15/445 (3%)

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           + +  G  CS     ++ L+  +  +G +  A    R +     ++  H      CGY  
Sbjct: 143 ILDTAGTRCS--NFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHG-----CGYLL 195

Query: 326 KGLL-----VEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
             ++     V       E++  G  P +  YNILI   CK G + DA+  F E+ ++ + 
Sbjct: 196 DKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLR 255

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           P  +S+NTL+ G C+S N+ E F L   +    + P V TY+ LI GLC+ G L+VA+QL
Sbjct: 256 PTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQL 315

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
            + M  +G+ P+ IT+T +++G C+   +  A   +++ML  G++PD   Y T + G  K
Sbjct: 316 FDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCK 375

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
           +GD ++A +L +EM   G  PD ITY  L+ G CK G LE A E+ + M  +G + D++ 
Sbjct: 376 VGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVA 435

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           +T++I      G +R        M+  G+ P   TYT++I  +  +G +++ F    EMQ
Sbjct: 436 FTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQ 495

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
           + G +P VITYN L+NGLC+  ++  A  L   M   G+ P+  TY IL+  +C  G  +
Sbjct: 496 INGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAE 555

Query: 681 EALRLYKEMLDREIEPDYCTHSALL 705
           + L+L  E   + +  DY  +++L+
Sbjct: 556 DLLKLRNE---KGLIVDYAYYTSLV 577



 Score =  250 bits (638), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 143/492 (29%), Positives = 246/492 (50%), Gaps = 8/492 (1%)

Query: 113 WVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCV----NMHGILDVLIGGGLS 168
           W+ + P  +     +C +   L    + +    ++  +V      +   +   ++    +
Sbjct: 90  WLSSIPTFRHTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAGT 149

Query: 169 SCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR 228
            C +  + D L++ Y     V   +  F  +  +        C  ++  + ++   V   
Sbjct: 150 RCSNF-VFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIW 208

Query: 229 EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
             Y  + E+G  P +  YN +++ FCKEG +++A  +  E++ RG  P  V++N LI G 
Sbjct: 209 TFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGL 268

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
            ++  L++   L + M +  +     +Y+ +I G  ++G L  A  L +EM  RG+ P  
Sbjct: 269 CKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNG 328

Query: 349 ATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDE 408
            T+  LI G C+  R+  A + + +ML   V PD++ YNTLL G C+ G++ +A  L DE
Sbjct: 329 ITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDE 388

Query: 409 LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
           +R   + P  +TY TLIDG C+ GDLE A ++++ M  +G++ D + +T +++G C+ G 
Sbjct: 389 MRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGR 448

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
           +  A     EM+  G++PD   YT  I G  K G+    ++L +EM   G  P +ITYNV
Sbjct: 449 VRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNV 508

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           L++GLCK G ++ AN LL  M+  G  PD ITY  ++    + G   +  DL      KG
Sbjct: 509 LMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG---KAEDLLKLRNEKG 565

Query: 589 LSPTLVTYTVLI 600
           L      YT L+
Sbjct: 566 LIVDYAYYTSLV 577


>gi|242038885|ref|XP_002466837.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
 gi|241920691|gb|EER93835.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
          Length = 1014

 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 161/554 (29%), Positives = 270/554 (48%), Gaps = 34/554 (6%)

Query: 182 IYTKKSMVEQ---------CLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR 232
           IYT   M+++           L+  +M ++ L+PD    N +I      G    A  V+ 
Sbjct: 292 IYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLIPDECTYNTLINGFFGEGKINHAHYVFN 351

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQ--------------------GR 272
            M      PS+ TY TM+D +C+   + +AL +L EMQ                      
Sbjct: 352 HMLRQTFVPSVATYTTMIDGYCRNRRIDKALSVLSEMQITGVMPSEISKAKQILKSMLED 411

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA 332
           G  P+ VTY+ LI      G + +A    + M ++ +   + S+N II  Y  +G +VEA
Sbjct: 412 GIDPDIVTYSALIN----EGMITEAEHFRQYMSRMKISFDSVSFNCIIDSYCHRGNIVEA 467

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
             + + MV  G +P + TY  L+ GLC+ G +  A+   F +L      D  ++N LL G
Sbjct: 468 FTVYDAMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAIDEKTFNALLLG 527

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
            C+ G + EA  L +++   N +P + TY  L+ G CR G +  A  + + M+++G++PD
Sbjct: 528 ICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSGFCRKGKILPALIMLQMMLDKGVVPD 587

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEML-RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
            + YT ++NG    G +  A   F E++ ++GL  D  AY + + G LK G+ +   R+ 
Sbjct: 588 TVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNINTIKRMM 647

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
            +M      P+  +YN+L+HG  K G   ++  L + MV  G  PD++TY  +I    E 
Sbjct: 648 SDMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSEC 707

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
           G +         M+ +G+ P  + + +LI A + + ++  A   F+ M+   + P+  TY
Sbjct: 708 GLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQLFNCMKWLRMSPSSKTY 767

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           +A+INGL R   +DQ++ +  +M + G+ PN   Y  L+N  C  G    A RL +EM  
Sbjct: 768 SAMINGLIRKNYLDQSHEVLREMLQVGLQPNHTHYIALVNAKCRVGKIDRAFRLKEEMKA 827

Query: 692 REIEPDYCTHSALL 705
             I P     S+++
Sbjct: 828 LGIVPADVAESSII 841



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 140/517 (27%), Positives = 257/517 (49%), Gaps = 1/517 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y  +  + +   V++ M+R G  P+V     +++ L   G  V+A++    + +      
Sbjct: 458 YCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAID 517

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             T+N +L   CK G + EAL+L  +M    C P+  TY +L++GF R G++  A  +++
Sbjct: 518 EKTFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSGFCRKGKILPALIMLQ 577

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR-GVAPTLATYNILIYGLCKW 361
            ML  G+     +Y  ++ G   +G +  A  + +E++ + G+      YN L+ G  K 
Sbjct: 578 MMLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKG 637

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           G ++  +    +M +  V P+  SYN L++GY + G   ++  L+  +  + + P  VTY
Sbjct: 638 GNINTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLYKYMVRKGIRPDNVTY 697

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
             LI GL   G +++A +  E M+ +GI PD + + I++    +   +  A + FN M  
Sbjct: 698 RLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQLFNCMKW 757

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
             + P    Y+  I G ++     +++ +  EML  G  P+   Y  LV+  C++G ++ 
Sbjct: 758 LRMSPSSKTYSAMINGLIRKNYLDQSHEVLREMLQVGLQPNHTHYIALVNAKCRVGKIDR 817

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A  L  +M   G +P  +  +SII    + G L     +F+ M+R G+ PT+ T+T L+H
Sbjct: 818 AFRLKEEMKALGIVPADVAESSIIRGLCKCGKLEEAVIVFSTMMRSGMVPTVATFTTLMH 877

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
                 ++  A      M+   ++ +V++YN LI GLC+ +RI  A  L+ +M+ +G+ P
Sbjct: 878 CLCKESKIADALHLKRLMESCRLKVDVVSYNVLITGLCKDKRISDALDLYEEMKSKGLWP 937

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
           N  TY  L     + G  Q    L +++ +R + P Y
Sbjct: 938 NVTTYITLTGAMYSTGIMQNGEELLEDIEERGLIPVY 974



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 176/680 (25%), Positives = 301/680 (44%), Gaps = 97/680 (14%)

Query: 105 RIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIG 164
           ++AL+    +  + G+ R  +++C  + ILI++ +   A  V+  +  +           
Sbjct: 82  KLALKILSSIVERSGLDRITYIYCMAVPILIQAQMHSQAMSVLRRLAVM----------- 130

Query: 165 GGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS 224
            G S                       C  +F  +LR  ++    + N ++  L    + 
Sbjct: 131 -GFS-----------------------CTAIFTSLLR--IISRFDSTNHVVFELLVKAY- 163

Query: 225 VKAREVYR------MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNG 278
           VK R+V         M + G K S +  NT+L +  ++GE +     L E        + 
Sbjct: 164 VKERKVLDAAVAVLFMDDCGFKASPIACNTILRALVEQGESKYVWLFLRESLAHNFPLDV 223

Query: 279 VTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
            T N+L+     NGE  +A  +++ M    L  S  +YN I+  Y +KG    AL + E+
Sbjct: 224 TTCNILLNSLCTNGEFRKAEDMLQKMKTCRLSNSV-TYNTILHWYVKKGRFKAALCVLED 282

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
           M    +   + TYNI+I  LC+  R + A      M + ++IPD  +YNTL+ G+   G 
Sbjct: 283 MERDSIPADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLIPDECTYNTLINGFFGEGK 342

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY--------------------GDLEVAQ 438
           I  A  +F+ +  +  VP+V TY T+IDG CR                      ++  A+
Sbjct: 343 INHAHYVFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALSVLSEMQITGVMPSEISKAK 402

Query: 439 QLKENMINQGILPDVITYTIMVN-------------------------------GSCKMG 467
           Q+ ++M+  GI PD++TY+ ++N                                 C  G
Sbjct: 403 QILKSMLEDGIDPDIVTYSALINEGMITEAEHFRQYMSRMKISFDSVSFNCIIDSYCHRG 462

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
           N+  A   ++ M+R G  P+   Y   + G  + G   +A +    +L      D  T+N
Sbjct: 463 NIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAIDEKTFN 522

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
            L+ G+CK G+L+EA +L  KMV +  +PD  TYT ++      G +     +   ML K
Sbjct: 523 ALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSGFCRKGKILPALIMLQMMLDK 582

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK-GIRPNVITYNALINGLCRLRRIDQ 646
           G+ P  V YT L++     G+++ A   F E+  K G+  + I YN+L+NG  +   I+ 
Sbjct: 583 GVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNINT 642

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
              +  DM +  + PN  +Y IL++     G + ++L LYK M+ + I PD  T+  L+L
Sbjct: 643 IKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLYKYMVRKGIRPDNVTYRLLIL 702

Query: 707 KQLDKDYKVHAVEYLESLTL 726
              +      AV++LE + L
Sbjct: 703 GLSECGLIDIAVKFLEKMVL 722



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 119/461 (25%), Positives = 222/461 (48%), Gaps = 1/461 (0%)

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
           + S +  K  + LLL   K   +++ L +  KM++N  LPD+     ++      G  + 
Sbjct: 512 IPSAIDEKTFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSGFCRKGKILP 571

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR-GCSPNGVTYNVLI 285
           A  + +MM + G+ P  V Y  +L+    EG+++ A  +  E+  + G   + + YN L+
Sbjct: 572 ALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLM 631

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            G+ + G +   + ++ DM +  +  ++ SYN ++ GY + G   ++L L + MV +G+ 
Sbjct: 632 NGYLKGGNINTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLYKYMVRKGIR 691

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P   TY +LI GL + G +  A     +M+ + + PD + ++ L+  +     +  A  L
Sbjct: 692 PDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQL 751

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
           F+ ++   + P+  TY+ +I+GL R   L+ + ++   M+  G+ P+   Y  +VN  C+
Sbjct: 752 FNCMKWLRMSPSSKTYSAMINGLIRKNYLDQSHEVLREMLQVGLQPNHTHYIALVNAKCR 811

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
           +G +  A     EM   G+ P   A ++ I G  K G   EA  +   M+  G  P + T
Sbjct: 812 VGKIDRAFRLKEEMKALGIVPADVAESSIIRGLCKCGKLEEAVIVFSTMMRSGMVPTVAT 871

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           +  L+H LCK   + +A  L R M       D ++Y  +I    +   +    DL+  M 
Sbjct: 872 FTTLMHCLCKESKIADALHLKRLMESCRLKVDVVSYNVLITGLCKDKRISDALDLYEEMK 931

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRP 626
            KGL P + TY  L  A  + G ++       +++ +G+ P
Sbjct: 932 SKGLWPNVTTYITLTGAMYSTGIMQNGEELLEDIEERGLIP 972



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/390 (25%), Positives = 185/390 (47%), Gaps = 22/390 (5%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVC--------VNMHGILDVLIGGGLSSC 170
           GV  D   +  +L  LI  G +++A +V + ++C        +  + +++  + GG  + 
Sbjct: 583 GVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNINT 642

Query: 171 VSIKILDL--------------LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK 216
           +   + D+              L+  Y K     + L ++  M+R G+ PD      +I 
Sbjct: 643 IKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLYKYMVRKGIRPDNVTYRLLIL 702

Query: 217 VLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSP 276
            L + G    A +    M   GI P  + ++ ++ +F ++ +M  AL+L   M+    SP
Sbjct: 703 GLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQLFNCMKWLRMSP 762

Query: 277 NGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLE 336
           +  TY+ +I G  R   L+Q+  ++R+ML++GL+ +   Y  ++      G +  A  L+
Sbjct: 763 SSKTYSAMINGLIRKNYLDQSHEVLREMLQVGLQPNHTHYIALVNAKCRVGKIDRAFRLK 822

Query: 337 EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS 396
           EEM   G+ P     + +I GLCK G++ +A   F  M+R  ++P + ++ TL++  C+ 
Sbjct: 823 EEMKALGIVPADVAESSIIRGLCKCGKLEEAVIVFSTMMRSGMVPTVATFTTLMHCLCKE 882

Query: 397 GNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
             I +A  L   + S  L   VV+YN LI GLC+   +  A  L E M ++G+ P+V TY
Sbjct: 883 SKIADALHLKRLMESCRLKVDVVSYNVLITGLCKDKRISDALDLYEEMKSKGLWPNVTTY 942

Query: 457 TIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
             +       G +    E   ++  +GL P
Sbjct: 943 ITLTGAMYSTGIMQNGEELLEDIEERGLIP 972



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 158/319 (49%), Gaps = 17/319 (5%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGIL-DVLIGG 165
           +L  ++++  + G++ D   +  ++  L E GL+  A   +E +V   + GI  D L+  
Sbjct: 678 SLYLYKYM-VRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMV---LEGIFPDRLV-- 731

Query: 166 GLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSV 225
                      D+L+  +++KS +   L +FN M    + P  K  + +I  L    +  
Sbjct: 732 ----------FDILITAFSEKSKMHNALQLFNCMKWLRMSPSSKTYSAMINGLIRKNYLD 781

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           ++ EV R M + G++P+   Y  ++++ C+ G++  A  L  EM+  G  P  V  + +I
Sbjct: 782 QSHEVLREMLQVGLQPNHTHYIALVNAKCRVGKIDRAFRLKEEMKALGIVPADVAESSII 841

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            G  + G+LE+A  +   M++ G+  +  ++  ++    ++  + +AL+L+  M +  + 
Sbjct: 842 RGLCKCGKLEEAVIVFSTMMRSGMVPTVATFTTLMHCLCKESKIADALHLKRLMESCRLK 901

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
             + +YN+LI GLCK  R+SDA   + EM  K + P++ +Y TL      +G +     L
Sbjct: 902 VDVVSYNVLITGLCKDKRISDALDLYEEMKSKGLWPNVTTYITLTGAMYSTGIMQNGEEL 961

Query: 406 FDELRSRNLVPTVVTYNTL 424
            +++  R L+P  V    L
Sbjct: 962 LEDIEERGLIPVYVQLENL 980


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 162/563 (28%), Positives = 269/563 (47%), Gaps = 37/563 (6%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
            + M + G+ P+V   N +I  L        A +++  M    +  SIVTYNT++D +CK
Sbjct: 199 LDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCK 258

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
            GE+  A ++   M+ +  +PN +T+N L++G  +  ++++AR L+++M   G     ++
Sbjct: 259 VGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYT 318

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           Y+ +  G         A+ L E+   +G+     T +IL+ GLCK G+V  A     +  
Sbjct: 319 YSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFT 378

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
              ++ D + YNT + GYCR G++ +A L  + + S  L P  +T+N+LID  C   +++
Sbjct: 379 ENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMD 438

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGS-------------------------------- 463
            A++  + M  +G+ P V TY  +++G                                 
Sbjct: 439 KAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLI 498

Query: 464 ---CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
              CK G +  A     +M+ +G+ P+   Y   I G   +G   +A R  +EM+     
Sbjct: 499 NCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEIS 558

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           P L+TYNVL+ GLCK G L EA + L ++   G  PD ITY S+I      G++ +   L
Sbjct: 559 PTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGL 618

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
           +  M   G+ PT+ TY  LI   +  G +EL    ++EM    + P+ + YNA+I+    
Sbjct: 619 YETMKNLGIKPTVRTYHPLISGCSKEG-IELVEKLYNEMLQMNLLPDRVVYNAMIHCYAE 677

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
           +    +AY L   M ++GI P+K TY  LI  +   G       L   M  +E+ P   T
Sbjct: 678 IGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADT 737

Query: 701 HSALLLKQLD-KDYKVHAVEYLE 722
           +  L+    D KD+    V Y E
Sbjct: 738 YDILVKGHCDLKDFSGAYVWYRE 760



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 139/435 (31%), Positives = 221/435 (50%), Gaps = 1/435 (0%)

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           KA E+ +   E G+    V YNT ++ +C+ G+M +A+  +  M+  G  PN +T+N LI
Sbjct: 369 KAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLI 428

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
             F    E+++A   ++ M + G+  S  +YN +I GY +         + E+M   GV 
Sbjct: 429 DKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVK 488

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P + +Y  LI  LCK G++ +A     +M+ + V+P+   YN L+ G C  G + +A   
Sbjct: 489 PNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRF 548

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
           FDE+    + PT+VTYN LIDGLC+ G L  A+     + + G  PDVITY  +++G   
Sbjct: 549 FDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYAN 608

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
            GN+S     +  M   G++P    Y   I+G  K G      +L  EML     PD + 
Sbjct: 609 AGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEG-IELVEKLYNEMLQMNLLPDRVV 667

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           YN ++H   ++G+ ++A  L + M+  G  PD +TY S+I      G L   +DL NNM 
Sbjct: 668 YNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMK 727

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
            K L+P   TY +L+  H        A++++ EM      PN    N L  GL +  R+ 
Sbjct: 728 AKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQ 787

Query: 646 QAYGLFIDMEEEGIL 660
           +   +  +M  +GI+
Sbjct: 788 EVQVICSEMNVKGII 802



 Score =  241 bits (616), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 143/488 (29%), Positives = 255/488 (52%), Gaps = 5/488 (1%)

Query: 241 PSIVTYNTMLDSFCKEGEM-QEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
           P  +T + ML S C + +M +EA+EL   M+  G  P+ V+ ++L +      +  +   
Sbjct: 103 PLRITLSDMLLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVD 162

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
           L  ++   G +     Y   I    +   L   +   + M  RGV P +  YN+LI GLC
Sbjct: 163 LFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLC 222

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
           +  R+ DA   F EM   N++  I++YNTL+ GYC+ G +  AF + + ++ +++ P ++
Sbjct: 223 REKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNII 282

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG--SCKMGNLSMAREFFN 477
           T+N+L+ GLC+   ++ A+ L + M   G +PD  TY+I+ +G   C  GN +M  E + 
Sbjct: 283 TFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAM--ELYE 340

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           +   KG++ + +  +  + G  K G   +A  + ++    G   D + YN  V+G C++G
Sbjct: 341 QATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIG 400

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            + +A   + +M   G  P+ IT+ S+I    +M ++ +  +    M  KG++P++ TY 
Sbjct: 401 DMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYN 460

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
            LI  +      +  F    +M+  G++PNV++Y +LIN LC+  +I +A  +  DM   
Sbjct: 461 TLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICR 520

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHA 717
           G+LPN   Y +LI+ +C  G  ++ALR + EM+  EI P   T++ L+     K     A
Sbjct: 521 GVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEA 580

Query: 718 VEYLESLT 725
            ++L  +T
Sbjct: 581 EDFLTQIT 588



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 156/578 (26%), Positives = 283/578 (48%), Gaps = 3/578 (0%)

Query: 131 LEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSC---VSIKILDLLLLIYTKKS 187
           L+IL++     +AY + ++++           +    S+C   + I + D+LL +  K  
Sbjct: 61  LQILLQQNCNEAAYSLAKSLILTKSTFSSPSDLFSCFSACSIPLRITLSDMLLSVCCKSK 120

Query: 188 MVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
           M+ + + ++  M R+G LP + + + +   L +    VK  +++  +   G +     Y 
Sbjct: 121 MLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIENSGFRTDTFMYA 180

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
             + +  K   ++  +E L  M+ RG  PN   YNVLI G  R   +  A  +  +M  +
Sbjct: 181 KAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNI 240

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
            L  S  +YN +I GY + G L  A  + E M  + VAP + T+N L+ GLCK  ++ +A
Sbjct: 241 NLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEA 300

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
           R    EM     +PD  +Y+ L  G  R  +   A  L+++   + +     T + L++G
Sbjct: 301 RSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNG 360

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           LC+ G +E A+++ +     G++ D + Y   VNG C++G+++ A      M   GL+P+
Sbjct: 361 LCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPN 420

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              + + I     + +  +A    ++M  KG  P + TYN L+ G  KL + +   ++L 
Sbjct: 421 SITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILE 480

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
           +M   G  P+ ++Y S+I+   + G +     +  +M+ +G+ P    Y +LI      G
Sbjct: 481 QMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVG 540

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
           +++ A  +F EM    I P ++TYN LI+GLC+  ++ +A      +   G  P+  TY 
Sbjct: 541 KVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYN 600

Query: 668 ILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            LI+   NAGN  + L LY+ M +  I+P   T+  L+
Sbjct: 601 SLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLI 638



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 77/150 (51%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           ++N+ML+  LLPD    N +I    + G + KA  +++ M + GI P  +TYN+++    
Sbjct: 652 LYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHF 711

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           +EG++    +L+  M+ +  +P   TY++L+ G     +   A    R+M++     +A 
Sbjct: 712 REGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNAS 771

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
             N +  G  ++G L E   +  EM  +G+
Sbjct: 772 ICNELTAGLEQEGRLQEVQVICSEMNVKGI 801


>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
            chloroplastic [Vitis vinifera]
 gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 163/566 (28%), Positives = 289/566 (51%), Gaps = 38/566 (6%)

Query: 177  DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
            ++L+  Y K   V+  + + ++M  NG  P+V   N +I  L       +A ++++ M E
Sbjct: 511  NILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKE 570

Query: 237  FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
              + P++VTYNT+L    KEG +QEA  L   M    C PN +++N L+    +NGE++ 
Sbjct: 571  MKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDL 630

Query: 297  ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
            A  ++  M ++       +YN +I G  ++  +  A  L  +M  + + P   T   L+ 
Sbjct: 631  ALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQM-KKVIYPDYVTLCTLLP 689

Query: 357  GLCKWGRVSDA--------RH-------RFFEMLRKNVIPDIISYNTLLYG--------- 392
            G+ K GR+ DA         H        F+E L   ++ +     ++L+          
Sbjct: 690  GVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTIC 749

Query: 393  ------------YCRSGNIGEAFLLFDEL-RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
                         C+ G   +A+ +F +L +S  + P++  YN+LIDGL +    E+A  
Sbjct: 750  EDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWG 809

Query: 440  LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
            L   M N G  PDV TY + ++   K G +    + + EML +G +P+   +   I G +
Sbjct: 810  LFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLV 869

Query: 500  KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
            K     +A  L  ++++  F P   TY  L+ GL KLG LEEA +   +M+  G +P+  
Sbjct: 870  KSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCP 929

Query: 560  TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
             Y  +++   + GD+    +LF  M+++G+ P L +Y++++      G+++ A  YF E+
Sbjct: 930  LYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEEL 989

Query: 620  QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
            ++ G+ P+++ YN +INGL R +R+++A  LF +M   GI P+ YTY  LI     AG  
Sbjct: 990  KLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMV 1049

Query: 680  QEALRLYKEMLDREIEPDYCTHSALL 705
            +EA ++Y+E+  + +EP+  T++AL+
Sbjct: 1050 EEAGKMYEELQLKGLEPNVFTYNALI 1075



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 158/568 (27%), Positives = 272/568 (47%), Gaps = 36/568 (6%)

Query: 173  IKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR 232
            + I++ L+    K   V++   +F +M    L P V   N ++  L   G   +A  +++
Sbjct: 542  VVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFK 601

Query: 233  MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
             M      P+ +++NT+LD  CK GE+  AL++L+ M    C P+ +TYN +I G  +  
Sbjct: 602  GMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKEN 661

Query: 293  ELEQA---------------------------RGLIRDMLKLGLKVSAHSYNPIICGYSE 325
             +  A                            G I D  ++  +   H  +     + E
Sbjct: 662  RVNYAFWLFHQMKKVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWE 721

Query: 326  K---GLLVEA-----LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
                G+L+EA     +   E +V   +    +    L+  LCK G+  DA + F ++ + 
Sbjct: 722  DLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKS 781

Query: 378  NVI-PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
              I P + +YN+L+ G  ++     A+ LF ++++    P V TYN  +D L + G ++ 
Sbjct: 782  FCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKE 841

Query: 437  AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
               L E M+ +G  P+ IT+ I++ G  K  +L  A + + +++     P  + Y   I 
Sbjct: 842  LFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLID 901

Query: 497  GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
            G LKLG   EA +  EEML  G  P+   YN+L++G  K G +E A EL R+MV +G  P
Sbjct: 902  GLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRP 961

Query: 557  DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
            D  +Y+ ++     +G +      F  +   GL P LV Y ++I+      R+E A   F
Sbjct: 962  DLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLF 1021

Query: 617  SEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNA 676
             EM+ +GI P++ TYNALI  L     +++A  ++ +++ +G+ PN +TY  LI  +  +
Sbjct: 1022 DEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMS 1081

Query: 677  GNWQEALRLYKEMLDREIEPDYCTHSAL 704
            GN   A  +YK+M+     P+  T + L
Sbjct: 1082 GNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 176/655 (26%), Positives = 292/655 (44%), Gaps = 49/655 (7%)

Query: 63  ISTVEEKPWAFCNNRWVSDHFQAVVSDPELLVRVLNRIREKPRI------------ALRF 110
           +  V+ KP +  ++  V    +++ SDP       N + E PR+             LR 
Sbjct: 76  VVVVKRKPESTMSSEEVYRVLKSI-SDPNQAFSFFNSVAEMPRVIHTTETCNYVLEMLRA 134

Query: 111 FRWVE---------TQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDV 161
            R VE          +  +KR    + TI ++L   G LR A   +E +  V        
Sbjct: 135 HRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKV-------- 186

Query: 162 LIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDN 221
             G  L+    I ++ LLL    K     + L V+ +M+  G+ P +K  + ++  L   
Sbjct: 187 --GFVLNGYSYIGLIHLLL----KSGFCREALKVYRRMVSEGIKPSLKTYSALMVALG-- 238

Query: 222 GFSVKAREVYRMMG------EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCS 275
               K R++  +MG        G++P+I T+   +    + G++ EA  +L  M   GC 
Sbjct: 239 ----KRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCG 294

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           P+ VTY VLI      G+L  A+ L   M     K    +Y  ++  +S+ G L      
Sbjct: 295 PDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEF 354

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
             EM   G  P + T+ ILI  LCK G+V +A      M ++ V P++ +YNTL+ G  R
Sbjct: 355 WSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLR 414

Query: 396 SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
              + EA  LF+ + S  L  T  TY   ID   + G+   A +  E M   GI+P+++ 
Sbjct: 415 LNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVA 474

Query: 456 YTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML 515
               +    + G L  A+EFFN + + GL PD   Y   +    K G   +A +L  EM 
Sbjct: 475 CNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEME 534

Query: 516 AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLR 575
             G  P+++  N L+  L K   ++EA ++ ++M      P  +TY +++    + G ++
Sbjct: 535 ENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQ 594

Query: 576 RGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALI 635
               LF  M+     P  +++  L+      G ++LA      M      P+V+TYN +I
Sbjct: 595 EATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVI 654

Query: 636 NGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
            GL +  R++ A+ LF  M++  I P+  T   L+      G  ++A R+ KE +
Sbjct: 655 YGLIKENRVNYAFWLFHQMKKV-IYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFV 708



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 143/517 (27%), Positives = 246/517 (47%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           VE  ++VFN M +  +   +     I KVL   G   +A      M + G   +  +Y  
Sbjct: 138 VEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIG 197

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++    K G  +EAL++   M   G  P+  TY+ L+    +  ++E   GL+++M  LG
Sbjct: 198 LIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLG 257

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           L+ + +++   I      G + EA  + + M   G  P + TY +LI  LC  G++++A+
Sbjct: 258 LRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAK 317

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F +M   +  PD ++Y TLL  +   G++      + E+ +   +P VVT+  LID L
Sbjct: 318 ELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDAL 377

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G ++ A    + M  QG+ P++ TY  ++ G  ++  L  A E FN M   GL+   
Sbjct: 378 CKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTA 437

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
           + Y   I    K G++ +A +  E+M   G  P+++  N  ++ L + G LEEA E    
Sbjct: 438 YTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNG 497

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           +   G  PD ITY  ++    + G +     L + M   G  P +V    LI       R
Sbjct: 498 LKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADR 557

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           ++ A+  F  M+   + P V+TYN L+ GL +  R+ +A  LF  M  +   PN  ++  
Sbjct: 558 VDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNT 617

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           L++  C  G    AL++   M +    PD  T++ ++
Sbjct: 618 LLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVI 654



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 149/549 (27%), Positives = 259/549 (47%), Gaps = 38/549 (6%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F KM  +   PD      ++    D+G     +E +  M   G  P +VT+  ++D+ C
Sbjct: 319 LFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALC 378

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K G++ EA   L  M+ +G +PN  TYN LI G  R   L++A  L   M  LGL+ +A+
Sbjct: 379 KVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAY 438

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +Y   I  Y + G   +A+   E+M T G+ P +   N  +Y L + GR+ +A+  F  +
Sbjct: 439 TYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGL 498

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
            +  + PD I+YN L+  Y ++G + +A  L  E+      P VV  N+LID L +   +
Sbjct: 499 KKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRV 558

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A ++ + M    + P V+TY  ++ G  K G +  A   F  M+     P+  ++ T 
Sbjct: 559 DEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTL 618

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           +    K G+   A ++   M      PD++TYN +++GL K   +  A  L  +M     
Sbjct: 619 LDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQM-KKVI 677

Query: 555 IPDHITYTSIIHASLE-----------------MGDLRRG---RDLFNNMLRKG------ 588
            PD++T  +++   ++                 +GD   G    DL   +L +       
Sbjct: 678 YPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSI 737

Query: 589 -LSPTLVTYTV---------LIHAHAARGRLELAFMYFSEMQVK-GIRPNVITYNALING 637
             + +LV  T+         L+      G+   A+  F ++     I P++  YN+LI+G
Sbjct: 738 LFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDG 797

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           L + R  + A+GLF  M+  G  P+ +TY + ++    +G  +E   LY+EML R  +P+
Sbjct: 798 LLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPN 857

Query: 698 YCTHSALLL 706
             TH+ ++ 
Sbjct: 858 TITHNIVIF 866



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 139/498 (27%), Positives = 230/498 (46%), Gaps = 38/498 (7%)

Query: 176  LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
             + LL    K   V+  L +  +M      PDV   N +I  L        A  ++  M 
Sbjct: 615  FNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMK 674

Query: 236  EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWE-MQGRGCSPNGVTYNVLITGFSRNGEL 294
            +  I P  VT  T+L    K+G +++A  +  E +   G   +G  +  L+ G     E+
Sbjct: 675  KV-IYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEI 733

Query: 295  EQAR-------------------GLIRDMLKLGLKVSAH-----------------SYNP 318
             Q+                     L++ + K G  V A+                 +YN 
Sbjct: 734  GQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNS 793

Query: 319  IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
            +I G  +  L   A  L  +M   G  P + TYN+ +  L K G++ +    + EML + 
Sbjct: 794  LIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRG 853

Query: 379  VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
              P+ I++N +++G  +S ++ +A  L+ +L S +  PT  TY  LIDGL + G LE A+
Sbjct: 854  CKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAK 913

Query: 439  QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
            Q  E M++ G +P+   Y I++NG  K G++  A E F  M+++G++PD  +Y+  +   
Sbjct: 914  QFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCL 973

Query: 499  LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
              +G   +A    EE+   G  PDL+ YN++++GL +   +EEA  L  +M   G  PD 
Sbjct: 974  CMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDL 1033

Query: 559  ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
             TY ++I      G +     ++  +  KGL P + TY  LI  H+  G  + A+  + +
Sbjct: 1034 YTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKK 1093

Query: 619  MQVKGIRPNVITYNALIN 636
            M V G RPN  T+  L N
Sbjct: 1094 MMVGGCRPNTGTFAQLPN 1111



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 113/381 (29%), Positives = 184/381 (48%)

Query: 344 VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF 403
           V  T  T N ++  L    RV D    F  M ++ +   I +Y T+       G + EA 
Sbjct: 118 VIHTTETCNYVLEMLRAHRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAP 177

Query: 404 LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
           +  +++R    V    +Y  LI  L + G    A ++   M+++GI P + TY+ ++   
Sbjct: 178 VALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVAL 237

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
            K  ++        EM   GL+P+ + +T  I    + G   EAY + + M   G  PD+
Sbjct: 238 GKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDV 297

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
           +TY VL+  LC  G L  A EL  KM      PD +TY +++    + GDL   ++ ++ 
Sbjct: 298 VTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSE 357

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           M   G  P +VT+T+LI A    G+++ AF     M+ +G+ PN+ TYN LI GL RL R
Sbjct: 358 MEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNR 417

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSA 703
           +D+A  LF  ME  G+    YTY + I+    +G   +A++ +++M    I P+    +A
Sbjct: 418 LDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNA 477

Query: 704 LLLKQLDKDYKVHAVEYLESL 724
            L    ++     A E+   L
Sbjct: 478 SLYSLAEQGRLEEAKEFFNGL 498



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/289 (31%), Positives = 150/289 (51%), Gaps = 4/289 (1%)

Query: 177  DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR--MM 234
            +L L    K   +++   ++ +ML  G  P+    N +I  L  +    KA ++Y   M 
Sbjct: 827  NLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMS 886

Query: 235  GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
            G+F   P+  TY  ++D   K G ++EA +   EM   GC PN   YN+L+ GF + G++
Sbjct: 887  GDF--SPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDV 944

Query: 295  EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
            E A  L R M+K G++    SY+ ++      G + +AL+  EE+   G+ P L  YN++
Sbjct: 945  ETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLM 1004

Query: 355  IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
            I GL +  RV +A   F EM  + + PD+ +YN L+     +G + EA  +++EL+ + L
Sbjct: 1005 INGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGL 1064

Query: 415  VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
             P V TYN LI G    G+ + A  + + M+  G  P+  T+  + N S
Sbjct: 1065 EPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQLPNQS 1113


>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Glycine max]
          Length = 693

 Score =  251 bits (642), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 164/519 (31%), Positives = 252/519 (48%), Gaps = 14/519 (2%)

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
           ++K   + G   +A E+   M   G+ PS  T N ++    + G ++ A  L  EM  RG
Sbjct: 138 MVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARG 197

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
             PN V+Y V++ G+ + G + ++   +  M++ G  V   + + I+  + EKG +  AL
Sbjct: 198 VQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRAL 257

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
                    G+ P L  +  +I GLCK G V  A     EM+ +   P++ ++  L+ G 
Sbjct: 258 WYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGL 317

Query: 394 CRSGNIGEAFLLFDEL-RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
           C+ G   +AF LF +L RS N  P V+TY  +I G CR   +  A+ L   M  QG+ P+
Sbjct: 318 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPN 377

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
             TYT +++G CK GN   A E  N M  +G  P+   Y   + G  K G   EAY++ +
Sbjct: 378 TNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLK 437

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
                G   D +TY +L+   CK   +++A  L  KMV  G  PD  +YT++I       
Sbjct: 438 SGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREK 497

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
            ++     F   +R GL PT  TYT +I  +   G L LA  +F  M   G   + ITY 
Sbjct: 498 RMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYG 557

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL----RLYKE 688
           ALI+GLC+  ++D+A  L+  M E+G+ P + T   L  E C   +   A+    RL K+
Sbjct: 558 ALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYEYCKIDDGCSAMVVLERLEKK 617

Query: 689 MLDREIEP---DYCTH-----SALLL-KQLDKDYKVHAV 718
           +  R +       C+      +AL   K LDKD  V+ V
Sbjct: 618 LWVRTVNTLVRKLCSERKVGMAALFFHKLLDKDPNVNRV 656



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 144/533 (27%), Positives = 257/533 (48%), Gaps = 4/533 (0%)

Query: 174 KILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRM 233
           +++  ++  + +   V++ + +  +M   GL P  K  N ++K++ + G    A  ++  
Sbjct: 133 EVMQCMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDE 192

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M   G++P+ V+Y  M+  +CK G + E+   L  M  RG   +  T ++++  F   G 
Sbjct: 193 MCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGF 252

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           + +A    R   ++GL+ +  ++  +I G  ++G + +A  + EEMV RG  P + T+  
Sbjct: 253 VTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTA 312

Query: 354 LIYGLCKWGRVSDARHRFFEMLR-KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
           LI GLCK G    A   F +++R +N  P++++Y  ++ GYCR   +  A +L   ++ +
Sbjct: 313 LIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQ 372

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
            L P   TY TLIDG C+ G+ E A +L   M  +G  P+V TY  +V+G CK G +  A
Sbjct: 373 GLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEA 432

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
            +      R GL  D+  YT  I+   K  +  +A  L  +M+  G  PD+ +Y  L+  
Sbjct: 433 YKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAV 492

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
            C+   ++E+     + V  G +P + TYTS+I      G+LR     F+ M   G +  
Sbjct: 493 FCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASD 552

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
            +TY  LI     + +L+ A   +  M  KG+ P  +T   L    C   +ID      +
Sbjct: 553 SITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYEYC---KIDDGCSAMV 609

Query: 653 DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            +E         T   L+ + C+      A   + ++LD++   +  T +A +
Sbjct: 610 VLERLEKKLWVRTVNTLVRKLCSERKVGMAALFFHKLLDKDPNVNRVTIAAFM 662



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/187 (21%), Positives = 80/187 (42%), Gaps = 35/187 (18%)

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
           F   H     ++ +  E+G ++   ++   M  +GL+P+  T   ++      G +E A 
Sbjct: 128 FEKAHEVMQCMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAE 187

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA---------YGLFIDME--------- 655
             F EM  +G++PN ++Y  ++ G C+L  + ++          G  +D           
Sbjct: 188 NLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREF 247

Query: 656 -----------------EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
                            E G+ PN   +T +I   C  G+ ++A  + +EM+ R  +P+ 
Sbjct: 248 CEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNV 307

Query: 699 CTHSALL 705
            TH+AL+
Sbjct: 308 YTHTALI 314


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  251 bits (642), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 147/498 (29%), Positives = 247/498 (49%), Gaps = 8/498 (1%)

Query: 208 VKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLW 267
           V  CN +IK L   G   +  +  R+    G   ++VTYNTM++ +C+ G +++A  L+ 
Sbjct: 98  VVPCNILIKRLCSGG---RVADAERVFATLGASATVVTYNTMVNGYCRAGRIEDARRLI- 153

Query: 268 EMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKG 327
              G    P+  T+N LI      G +  A  +  DML  G   S  +Y+ ++    +  
Sbjct: 154 --SGMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKAS 211

Query: 328 LLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYN 387
              +A+ L +EM  +G  P + TYN+LI  +C  G V +A +   ++      PD ++Y 
Sbjct: 212 GYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYT 271

Query: 388 TLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
            +L   C S    E   LF E+ S    P  VT+NT++  LC+ G ++ A ++ ++M   
Sbjct: 272 PVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEH 331

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
           G +PD++TY+ +++G C +G +  A E  + +   G +PD  AYTT + G   +     A
Sbjct: 332 GCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHA 391

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
             L  EM+    PPD +T+N ++  LC+ G ++ A +++ +M  +G  PD +TY SII  
Sbjct: 392 EELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDG 451

Query: 568 SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
                 +    +L +N+   G  P +VT+  L+    +  R E A      M      P+
Sbjct: 452 LCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPD 511

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYK 687
             T+N +I  LC+   + QA      M E G +PN+ TY I+++    AG  QEAL+L  
Sbjct: 512 ATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLS 571

Query: 688 EMLDREIEPDYCTHSALL 705
            M +    PD  T++ ++
Sbjct: 572 GMTNG--TPDLITYNTVI 587



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 156/537 (29%), Positives = 252/537 (46%), Gaps = 41/537 (7%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           PD    N +I+ L   G    A  V+  M   G  PS+VTY+ +LD+ CK    ++A+ L
Sbjct: 160 PDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVL 219

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI---ICG 322
           L EM+ +GC P+ VTYNVLI      G++++A  ++ D+   G K  A +Y P+   +CG
Sbjct: 220 LDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCG 279

Query: 323 --------------------------------YSEKGLLVEALNLEEEMVTRGVAPTLAT 350
                                             ++GL+  A+ + + M   G  P + T
Sbjct: 280 SERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVT 339

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           Y+ ++ GLC  GRV DA      +      PD I+Y T+L G C       A  L  E+ 
Sbjct: 340 YSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMV 399

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
             +  P  VT+NT+I  LC+ G ++ A ++ E M   G  PD++TY  +++G C    + 
Sbjct: 400 CSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCID 459

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            A E  + +   G +PD   + T + G   +    +A +L   M+    PPD  T+N ++
Sbjct: 460 DAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVI 519

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
             LC+ G L +A E L+ M  +G IP+  TY  ++ A L+ G  +    L + M     +
Sbjct: 520 TSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--T 577

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           P L+TY  +I      G++E A      M   G+ P+ ITY +L  G+CR    D+A  +
Sbjct: 578 PDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRM 637

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQE--ALRLYKEMLDREIEPDYCTHSALL 705
              +++ G+ P+   Y  ++   C   NW+   A+  +  M+     PD  T+  LL
Sbjct: 638 LCRLQDMGLSPDATFYNDILLGFCQ--NWRTDIAIDCFAHMVSSGCMPDESTYIILL 692



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 137/478 (28%), Positives = 230/478 (48%), Gaps = 11/478 (2%)

Query: 250 LDSFCKEGEMQEALELLWEMQGRG----CSP-NGVTYNVLITGFSRNGELEQARGLIRDM 304
           L S  +  E+ +AL L+  +   G    C P   V  N+LI      G +  A    R  
Sbjct: 65  LRSLIQREEIDDALALVDSIASGGGSGKCLPLPVVPCNILIKRLCSGGRVADAE---RVF 121

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
             LG   +  +YN ++ GY   G + +A  L   M      P   T+N LI  LC  GRV
Sbjct: 122 ATLGASATVVTYNTMVNGYCRAGRIEDARRLISGM---PFPPDTFTFNPLIRALCVRGRV 178

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            DA   F +ML +   P +++Y+ LL   C++    +A +L DE+R++   P +VTYN L
Sbjct: 179 PDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVL 238

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           I+ +C  GD++ A  +  ++ + G  PD +TYT ++   C         E F EM     
Sbjct: 239 INAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKC 298

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            PD   + T +    + G    A ++ + M   G  PD++TY+ ++ GLC +G +++A E
Sbjct: 299 APDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVE 358

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           LL ++   G  PD I YT+++     +       +L   M+     P  VT+  +I +  
Sbjct: 359 LLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLC 418

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
            +G ++ A     +M   G  P+++TYN++I+GLC  R ID A  L  +++  G  P+  
Sbjct: 419 QKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIV 478

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLE 722
           T+  L+   C+   W++A +L   M+  +  PD  T + ++     K   + A+E L+
Sbjct: 479 TFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLK 536



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 141/514 (27%), Positives = 240/514 (46%), Gaps = 4/514 (0%)

Query: 157 GILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK 216
            + D ++  G S   S+    +LL    K S   Q +++ ++M   G  PD+   N +I 
Sbjct: 183 AVFDDMLHRGCSP--SVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLIN 240

Query: 217 VLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSP 276
            + + G   +A  +   +   G KP  VTY  +L S C     +E  EL  EM    C+P
Sbjct: 241 AMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAP 300

Query: 277 NGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLE 336
           + VT+N ++T   + G +++A  ++  M + G      +Y+ I+ G  + G + +A+ L 
Sbjct: 301 DEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELL 360

Query: 337 EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS 396
             + + G  P    Y  ++ GLC   +   A     EM+  +  PD +++NT++   C+ 
Sbjct: 361 SRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQK 420

Query: 397 GNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
           G +  A  + +++      P +VTYN++IDGLC    ++ A +L  N+ + G  PD++T+
Sbjct: 421 GLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTF 480

Query: 457 TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA 516
             ++ G C +     A +    M+     PD   + T I    + G   +A    + M  
Sbjct: 481 NTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAE 540

Query: 517 KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
            G  P+  TYN++V  L K G  +EA +LL  M      PD ITY ++I    + G +  
Sbjct: 541 NGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNITKAGKMEE 598

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
             DL   M+  GLSP  +TY  L +        + A      +Q  G+ P+   YN ++ 
Sbjct: 599 ALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILL 658

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
           G C+  R D A   F  M   G +P++ TY IL+
Sbjct: 659 GFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILL 692



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 133/485 (27%), Positives = 229/485 (47%), Gaps = 6/485 (1%)

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +V  N ++   C  G + +A  +   +   G S   VTYN ++ G+ R G +E AR LI 
Sbjct: 98  VVPCNILIKRLCSGGRVADAERVFATL---GASATVVTYNTMVNGYCRAGRIEDARRLIS 154

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M          ++NP+I     +G + +AL + ++M+ RG +P++ TY+IL+   CK  
Sbjct: 155 GM---PFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKAS 211

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
               A     EM  K   PDI++YN L+   C  G++ EA  +  +L S    P  VTY 
Sbjct: 212 GYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYT 271

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            ++  LC     +  ++L   M +    PD +T+  +V   C+ G +  A +  + M   
Sbjct: 272 PVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEH 331

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G  PD   Y++ + G   +G   +A  L   + + G  PD I Y  ++ GLC +   E A
Sbjct: 332 GCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHA 391

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            EL+ +MV     PD +T+ ++I +  + G + R   +   M   G +P +VTY  +I  
Sbjct: 392 EELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDG 451

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
                 ++ A    S +Q  G +P+++T+N L+ GLC + R + A  L ++M      P+
Sbjct: 452 LCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPD 511

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLE 722
             T+  +I   C  G   +A+   K M +    P+  T++ ++   L       A++ L 
Sbjct: 512 ATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLS 571

Query: 723 SLTLG 727
            +T G
Sbjct: 572 GMTNG 576



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 142/340 (41%), Gaps = 51/340 (15%)

Query: 123 DEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLI 182
           DE  F T++  L + GL+  A  VVE                                  
Sbjct: 406 DEVTFNTVIASLCQKGLVDRAIKVVE---------------------------------- 431

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
                          +M  NG  PD+   N II  L +      A E+   +  +G KP 
Sbjct: 432 ---------------QMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPD 476

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           IVT+NT+L   C     ++A +L+  M    C P+  T+N +IT   + G L QA   ++
Sbjct: 477 IVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLK 536

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M + G   +  +YN ++    + G   EAL L   M T G  P L TYN +I  + K G
Sbjct: 537 IMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGM-TNGT-PDLITYNTVISNITKAG 594

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           ++ +A      M+   + PD I+Y +L YG CR      A  +   L+   L P    YN
Sbjct: 595 KMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYN 654

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
            ++ G C+    ++A     +M++ G +PD  TY I++  
Sbjct: 655 DILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEA 694


>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Glycine max]
          Length = 615

 Score =  251 bits (642), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 168/586 (28%), Positives = 273/586 (46%), Gaps = 79/586 (13%)

Query: 96  VLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNM 155
            LN +   P   L FF  + ++P  +     +CT+L  L    +L  A            
Sbjct: 91  TLNPLCLPPSSLLSFFNHLASRPPFRHTLHSYCTMLHFLCLHRMLPQA------------ 138

Query: 156 HGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLR----NGLLPDVKNC 211
           H ++  L+    ++  S     +L  +           LVF+ ++     +G  PD   C
Sbjct: 139 HSLVSFLVSRKGTNSASTLFSSILRTMPRHHHHHHSVGLVFDALISAYVDSGFTPDAVQC 198

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
            R++     N F V  R    ++        +V    +        E++ +  L  E+  
Sbjct: 199 FRLVT---KNKFPVPIRGCENLLRR------VVRLRPV--------EIERSWALYLEVLD 241

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
            G  P    +NVL+ GF + G++  AR L+ D                            
Sbjct: 242 SGYPPKIYFFNVLMHGFCKAGDVGNAR-LVFD---------------------------- 272

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
                 E+  RG+ PT+ ++N LI G CK G V +       M  + V PD+ +++ L+ 
Sbjct: 273 ------EIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALIN 326

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
           G C+ G + E  LLFDE+  R LVP  VT+ TLIDG C+ G +++A +  + M+ QG+ P
Sbjct: 327 GLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRP 386

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           D++TY  ++NG CK+G+L  AR   NEM   GL+PD+  +TT I G  K GD   A  ++
Sbjct: 387 DLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIK 446

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
             M+ +G   D + +  L+ GLC+ G + +A  +L  M+  GF PD  TYT +I    + 
Sbjct: 447 RRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKK 506

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
           GD++ G  L   M   G  P +VTY  L++    +G+++ A M    M   G+ PN ITY
Sbjct: 507 GDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITY 566

Query: 632 NALINGLCRLRRIDQAYGLFIDME----EEGILPNKYTYTILINEN 673
           N L++G          +G  +D++    E+G++ +  +YT L+NE+
Sbjct: 567 NILLDG-------HSKHGSSVDVDIFNSEKGLVTDYASYTALVNES 605



 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 129/368 (35%), Positives = 208/368 (56%), Gaps = 3/368 (0%)

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
           E++  G  P +  +N+L++G CK G V +AR  F E+ ++ + P ++S+NTL+ G C+SG
Sbjct: 238 EVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSG 297

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
           ++ E F L   + S  + P V T++ LI+GLC+ G L+    L + M  +G++P+ +T+T
Sbjct: 298 DVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFT 357

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
            +++G CK G + +A + F  ML +G++PD   Y   I G  K+GD  EA RL  EM A 
Sbjct: 358 TLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTAS 417

Query: 518 GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
           G  PD IT+  L+ G CK G +E A E+ R+MV +G   D + +T++I      G +   
Sbjct: 418 GLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDA 477

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
             +  +ML  G  P   TYT++I     +G +++ F    EMQ  G  P V+TYNAL+NG
Sbjct: 478 GRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNG 537

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           LC+  ++  A  L   M   G+ PN  TY IL++ +   G+  +      E   + +  D
Sbjct: 538 LCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGSSVDVDIFNSE---KGLVTD 594

Query: 698 YCTHSALL 705
           Y +++AL+
Sbjct: 595 YASYTALV 602



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 121/335 (36%), Positives = 192/335 (57%)

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
           + E+L     P I  +N L++G+C++G++G A L+FDE+  R L PTVV++NTLI G C+
Sbjct: 236 YLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCK 295

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
            GD+E   +LK  M ++G+ PDV T++ ++NG CK G L      F+EM  +GL P+   
Sbjct: 296 SGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVT 355

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           +TT I G+ K G    A +  + MLA+G  PDL+TYN L++GLCK+G L+EA  L+ +M 
Sbjct: 356 FTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMT 415

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
             G  PD IT+T++I    + GD+    ++   M+ +G+    V +T LI      GR+ 
Sbjct: 416 ASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVH 475

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
            A    ++M   G +P+  TY  +I+  C+   +   + L  +M+ +G +P   TY  L+
Sbjct: 476 DAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALM 535

Query: 671 NENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           N  C  G  + A  L   ML+  + P+  T++ LL
Sbjct: 536 NGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILL 570



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 164/368 (44%), Gaps = 67/368 (18%)

Query: 173 IKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR 232
           I   ++L+  + K   V    LVF+++ + GL P V + N +I     +G   +   +  
Sbjct: 248 IYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKG 307

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVT------------ 280
           +M   G+ P + T++ +++  CKEG + E   L  EM GRG  PNGVT            
Sbjct: 308 VMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGG 367

Query: 281 -----------------------YNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
                                  YN LI G  + G+L++AR L+ +M   GLK    ++ 
Sbjct: 368 KVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFT 427

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            +I G  + G +  AL ++  MV  G+      +  LI GLC+ GRV DA     +ML  
Sbjct: 428 TLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSA 487

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
              PD  +Y  ++  +C+ G++   F L  E++S   VP VVTYN L++GLC+ G ++ A
Sbjct: 488 GFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNA 547

Query: 438 QQLKENMINQGILPDVITYTIM--------------------------------VNGSCK 465
           + L + M+N G+ P+ ITY I+                                VN S K
Sbjct: 548 KMLLDAMLNVGVAPNDITYNILLDGHSKHGSSVDVDIFNSEKGLVTDYASYTALVNESSK 607

Query: 466 MGNLSMAR 473
                + R
Sbjct: 608 TSKDHLKR 615


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  251 bits (642), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 170/634 (26%), Positives = 295/634 (46%), Gaps = 27/634 (4%)

Query: 96  VLNRIREKPRI--ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCV 153
           VL R++ +  I  AL +F+ +      K     +  ++E L     +    ++++ +   
Sbjct: 46  VLKRLKHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQM--- 102

Query: 154 NMHGILDVLIGGGLSSCVSIKILDLLLLI---YTKKSMVEQCLLVFNKMLRNGLLPDVKN 210
            + GI          SC      DL + +   Y +    EQ L  F +M    + P VK 
Sbjct: 103 KLEGI----------SCSE----DLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKI 148

Query: 211 CNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQ 270
            N I+  L D         +Y  M + G++P++ TYN +L + CK   +  A +LL EM 
Sbjct: 149 YNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMS 208

Query: 271 GRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLV 330
            +GC P+ V+Y  LI+   + G++++AR L      +    S   YN +I G  ++    
Sbjct: 209 SKGCDPDEVSYTTLISSLCKLGKVKEAREL-----AMSFTPSVPVYNALINGVCKEYTFE 263

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
           EA  L +EM+ +G+ P + +Y  +I  L   G V  +     +M  +   P++ ++ +L+
Sbjct: 264 EAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLI 323

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
            G+   G   EA   +D +    +VP VV YN L+ GLC    L  A  +   M   G  
Sbjct: 324 KGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCC 383

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
           P+V TY+ +++G  K G+L  A E +N M+  G  P+  AYT  +    +    ++AY L
Sbjct: 384 PNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCL 443

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
            E M  +  PP+ +T+N  + GLC  G ++ A ++  +M   G  P+  TY  ++ + L+
Sbjct: 444 IENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLK 503

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
                    L  +M  +G+   LVTY  +I+ +   G L  A     +M V+G +P+ IT
Sbjct: 504 DRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAIT 563

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
            N +I+  C+  +++ A  L   +      P+   YT LI+  C     +EA+   + ML
Sbjct: 564 VNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRML 623

Query: 691 DREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
              I P+  T + L+           AV++L+++
Sbjct: 624 SEGISPNVATWNVLVRHLFSNMGHSGAVQFLDAV 657



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 176/366 (48%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           VE  L V  KM   G  P++     +IK     G S +A + +  M   G+ P++V YN 
Sbjct: 297 VELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNA 356

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++   C +  + +A+ +  +M+  GC PN  TY+ LI G+++ G+L+ A  +   M+  G
Sbjct: 357 LMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHG 416

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
              +  +Y  ++       +  +A  L E M      P   T+N  I GLC  GRV  A 
Sbjct: 417 CHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAI 476

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F +M      P+  +YN LL    +    GEAF L  ++  R +   +VTYNT+I G 
Sbjct: 477 KVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGY 536

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C  G L  A +L   M+ +G  PD IT  I+++  CK G +++A +  + +      PD 
Sbjct: 537 CCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDI 596

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
            AYT+ I+G        EA      ML++G  P++ T+NVLV  L        A + L  
Sbjct: 597 IAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDA 656

Query: 549 MVGDGF 554
           ++G GF
Sbjct: 657 VLGSGF 662



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/291 (29%), Positives = 141/291 (48%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           VFN+M  NG  P+V+  + +I      G    A EV+  M   G  P++V Y  M+D  C
Sbjct: 373 VFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLC 432

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           +     +A  L+  MQ   C PN VT+N  I G   +G ++ A  +   M   G   +  
Sbjct: 433 RNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTT 492

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +YN ++    +     EA  L ++M  RG+   L TYN +IYG C  G + +A     +M
Sbjct: 493 TYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKM 552

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           + +   PD I+ N ++  YC+ G +  A  L D L +    P ++ Y +LI G+C +  +
Sbjct: 553 VVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGV 612

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           E A      M+++GI P+V T+ ++V         S A +F + +L  G +
Sbjct: 613 EEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDAVLGSGFE 663


>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 743

 Score =  251 bits (642), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 154/484 (31%), Positives = 253/484 (52%), Gaps = 6/484 (1%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCK---EGEMQEALELLWEMQGRGCSPNGVTYNV 283
           A +V++ M    +KP+++T NT+L    +      +  A E+  +M   G S +  T+NV
Sbjct: 150 ALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASAREVFDDMVKIGVSLDVKTFNV 209

Query: 284 LITGFSRNGELEQARGLIRDML-KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
           L+ G+   G+LE A G++  M+ +  +     +YN I+   S+KG L +  +L  +M   
Sbjct: 210 LVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRN 269

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           G+ P   TYN L+YG CK G + +A      M + N++PD+ +YN L+ G C +G+I E 
Sbjct: 270 GLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNAGSIREG 329

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
             L D ++S  L P VVTYNTLIDG    G    A++L E M N G+ P+ +T+ I +  
Sbjct: 330 LELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKW 389

Query: 463 SCKMGNLSMAREFFNEMLR-KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
            CK            E++   G  PD   Y T I   LK+GD S A  +  EM  KG   
Sbjct: 390 LCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKM 449

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           + IT N ++  LCK   ++EA+ LL      G+I D +TY ++I        + +  +++
Sbjct: 450 NTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMW 509

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
           + M R  ++PT+ T+  LI      G+ ELA   F E+   G+ P+  T+N++I G C+ 
Sbjct: 510 DEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKE 569

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
            R+++A+  + +  +    P+ YT  IL+N  C  G  ++AL  +  ++  E E D  T+
Sbjct: 570 GRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLI-TEREVDTVTY 628

Query: 702 SALL 705
           + ++
Sbjct: 629 NTMI 632



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 161/562 (28%), Positives = 272/562 (48%), Gaps = 41/562 (7%)

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRI-IKVLR-DNGFS 224
           LS   S  + D+ L  Y         L VF KM+R  L P++  CN + I ++R  + FS
Sbjct: 125 LSPPPSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFS 184

Query: 225 V-KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR-GCSPNGVTYN 282
           +  AREV+  M + G+   + T+N +++ +C EG++++AL +L  M      +P+ VTYN
Sbjct: 185 IASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYN 244

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
            ++   S+ G L   + L+ DM + GL  +  +YN ++ GY + G L EA  + E M   
Sbjct: 245 TILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQT 304

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
            + P L TYNILI G+C  G + +       M    + PD+++YNTL+ G    G   EA
Sbjct: 305 NILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEA 364

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE-VAQQLKENMINQGILPDVITYTIMVN 461
             L +++ +  + P  VT+N  +  LC+    E V +++KE +   G  PD++TY  ++ 
Sbjct: 365 KKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIK 424

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQ-----------------------------------P 486
              K+G+LS A E   EM +KG++                                    
Sbjct: 425 AYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIV 484

Query: 487 DRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
           D   Y T I G  +     +A+ + +EM      P + T+N L+ GLC  G  E A E  
Sbjct: 485 DEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKF 544

Query: 547 RKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAAR 606
            ++   G +PD  T+ SII    + G + +  + +N  ++    P   T  +L++     
Sbjct: 545 DELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKE 604

Query: 607 GRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
           G  E A  +F+ + +     + +TYN +I+  C+ +++ +AY L  +MEE+ + P+++TY
Sbjct: 605 GMTEKALNFFNTL-ITEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTY 663

Query: 667 TILINENCNAGNWQEALRLYKE 688
             +I      G   EA  L K+
Sbjct: 664 NSIITSLMEDGKLSEADELLKK 685



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 143/470 (30%), Positives = 234/470 (49%), Gaps = 40/470 (8%)

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG---YSEKGLLVEA 332
           P+   +++ ++ +   G+   A  + + M++L LK +  + N ++ G   Y     +  A
Sbjct: 129 PSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASA 188

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK-NVIPDIISYNTLLY 391
             + ++MV  GV+  + T+N+L+ G C  G++ DA      M+ + NV PD ++YNT+L 
Sbjct: 189 REVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILK 248

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
              + G + +   L  +++   LVP  VTYN L+ G C+ G L+ A Q+ E M    ILP
Sbjct: 249 AMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILP 308

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           D+ TY I++NG C  G++    E  + M    LQPD   Y T I G  +LG + EA +L 
Sbjct: 309 DLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLM 368

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG-DGFIPDHITYTSIIHASLE 570
           E+M   G  P+ +T+N+ +  LCK    EE    ++++V   GF PD +TY ++I A L+
Sbjct: 369 EQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLK 428

Query: 571 MGDLRRGRDLFNNMLRKGL---SPTL--------------------------------VT 595
           +GDL    ++   M +KG+   + TL                                VT
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVT 488

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           Y  LI  +    ++E AF  + EM+   I P V T+N+LI GLC   + + A   F ++ 
Sbjct: 489 YGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELA 548

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           E G+LP+  T+  +I   C  G  ++A   Y E +    +PD  T + LL
Sbjct: 549 ESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILL 598



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 159/609 (26%), Positives = 290/609 (47%), Gaps = 48/609 (7%)

Query: 103 KPRIALRFFRW---VETQPGVKRDEFVFCTILEILIESGLLR--SAYWVVETVVCVNMHG 157
           KP +AL+ F+    ++ +P +     + C  L I    GL+R  S++ +       +   
Sbjct: 146 KPHVALQVFQKMIRLKLKPNL-----LTCNTLLI----GLVRYPSSFSIA------SARE 190

Query: 158 ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRN-GLLPDVKNCNRIIK 216
           + D ++  G+S  + +K  ++L+  Y  +  +E  L +  +M+    + PD    N I+K
Sbjct: 191 VFDDMVKIGVS--LDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILK 248

Query: 217 VLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSP 276
            +   G     +++   M   G+ P+ VTYN ++  +CK G ++EA +++  M+     P
Sbjct: 249 AMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILP 308

Query: 277 NGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLE 336
           +  TYN+LI G    G + +   L+  M  L L+    +YN +I G  E GL +EA  L 
Sbjct: 309 DLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLM 368

Query: 337 EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN-VIPDIISYNTLLYGYCR 395
           E+M   GV P   T+NI +  LCK  +  +   +  E++  +   PDI++Y+TL+  Y +
Sbjct: 369 EQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLK 428

Query: 396 SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
            G++  A  +  E+  + +    +T NT++D LC+   ++ A  L ++   +G + D +T
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVT 488

Query: 456 YTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML 515
           Y  ++ G  +   +  A E ++EM R  + P    + + I G    G T  A    +E+ 
Sbjct: 489 YGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELA 548

Query: 516 AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLR 575
             G  PD  T+N ++ G CK G +E+A E   + +   F PD+ T   +++   + G   
Sbjct: 549 ESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTE 608

Query: 576 RGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALI 635
           +  + FN ++ +    T VTY  +I A     +L+ A+   SEM+ K + P+  TYN++I
Sbjct: 609 KALNFFNTLITEREVDT-VTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSII 667

Query: 636 NGLCRLRRIDQA-------YGLFIDME----------------EEGILPNKYTYTILINE 672
             L    ++ +A        G F  M+                +E +      Y+ +INE
Sbjct: 668 TSLMEDGKLSEADELLKKFSGKFGSMKRNLHLETEKNPATSESKEELKTEAIAYSDVINE 727

Query: 673 NCNAGNWQE 681
            C+ G  +E
Sbjct: 728 LCSRGRLKE 736


>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Glycine max]
          Length = 1012

 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 176/663 (26%), Positives = 313/663 (47%), Gaps = 76/663 (11%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILD- 177
           GVK D   + T++    + G L  A  VV  ++         VL   G+ +   ++ L  
Sbjct: 175 GVKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQP 234

Query: 178 ------LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
                  L+  Y K   ++    ++ +M+ +G++PDV  C+ I+  L  +G   +A  + 
Sbjct: 235 TVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLL 294

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
           R M   G+ P+ V+Y T++ +  K G + EA     +M  RG S + V    ++ G  + 
Sbjct: 295 REMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKA 354

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G+ ++A  + + +LKL L  +  +Y  ++ G+ + G +  A  + ++M    V P + T+
Sbjct: 355 GKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTF 414

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           + +I G  K G ++ A     +M++ N++P++  Y  LL GY R+G    A   + E++S
Sbjct: 415 SSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKS 474

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
             L    + ++ L++ L R G ++ AQ L ++++++GI  DV  Y+ +++G  K GN S 
Sbjct: 475 WGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESA 534

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGD---------------------------- 503
           A     EM  K +Q D  AY     G L+LG                             
Sbjct: 535 ALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYEPKSVFSRMIELGLTPDCVTYNSVMNT 594

Query: 504 ------TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP- 556
                 T  A  L  EM + G  P+++TYN+L+ GLCK G++E+   +L +M+  G++P 
Sbjct: 595 YFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPT 654

Query: 557 ----------------------------------DHITYTSIIHASLEMGDLRRGRDLFN 582
                                             + + Y ++I     +G  ++   +  
Sbjct: 655 PIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLT 714

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
            M+ KG+S  +VTY  LI  +     +E AF  +S+M V GI PN+ TYNAL+ GL    
Sbjct: 715 EMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNG 774

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
            +  A  L  +M E G++PN  TY IL++ +   GN +++++LY EM+ +   P   T++
Sbjct: 775 LMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYN 834

Query: 703 ALL 705
            L+
Sbjct: 835 VLI 837



 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 155/543 (28%), Positives = 277/543 (51%), Gaps = 26/543 (4%)

Query: 204 LLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEAL 263
           L+P +   N ++     +GF  + + +Y  M   G+ P++ + N ++ S CK G++  AL
Sbjct: 6   LVPSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGDLGLAL 65

Query: 264 ELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGY 323
             L     R    + VTYN ++ GF + G  +Q  GL+ +M+K G+   + + N ++ GY
Sbjct: 66  GYL-----RNSVFDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGY 120

Query: 324 SEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
            + GL+  A  +   +V  GV       N L+ G C+ G VS A     +  +  V PDI
Sbjct: 121 CQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDI 180

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRS---------------------RNLVPTVVTYN 422
           ++YNTL+  +C+ G++ +A  + +E+                       R+L PTVVT+ 
Sbjct: 181 VTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWT 240

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           TLI   C++  ++    L E MI  G++PDV+T + ++ G C+ G L+ A     EM   
Sbjct: 241 TLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNM 300

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           GL P+  +YTT I+  LK G   EA+  Q +M+ +G   DL+    ++ GL K G  +EA
Sbjct: 301 GLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEA 360

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            E+ + ++    +P+ +TYT+++    ++GD+     +   M ++ + P +VT++ +I+ 
Sbjct: 361 EEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIING 420

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
           +A +G L  A     +M    I PNV  Y  L++G  R  + + A G + +M+  G+  N
Sbjct: 421 YAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEEN 480

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLE 722
              + IL+N    +G  +EA  L K++L + I  D   +S+L+     +  +  A+  ++
Sbjct: 481 NIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQ 540

Query: 723 SLT 725
            +T
Sbjct: 541 EMT 543



 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 154/563 (27%), Positives = 294/563 (52%), Gaps = 32/563 (5%)

Query: 166 GLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSV 225
            LS   S+ + + LL  +     V Q  +++++M+  G++P+V + N ++  L       
Sbjct: 3   ALSLVPSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSL------C 56

Query: 226 KAREVYRMMGEFGIKPSI---VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYN 282
           K  ++   +G   ++ S+   VTYNT++  FCK G   +   LL EM  +G   + VT N
Sbjct: 57  KVGDLGLALGY--LRNSVFDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCN 114

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
           +L+ G+ + G ++ A  ++ +++  G+ + A   N ++ GY E GL+  AL+L E+    
Sbjct: 115 ILVKGYCQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKN 174

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR---------------------KNVIP 381
           GV P + TYN L+   CK G ++ A     E+L                      +++ P
Sbjct: 175 GVKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQP 234

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
            ++++ TL+  YC+   I + F L++++    ++P VVT ++++ GLCR+G L  A  L 
Sbjct: 235 TVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLL 294

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
             M N G+ P+ ++YT +++   K G +  A    ++M+ +G+  D    TT + G  K 
Sbjct: 295 REMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKA 354

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
           G + EA  + + +L     P+ +TY  L+ G CK+G +E A  +L+KM  +  +P+ +T+
Sbjct: 355 GKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTF 414

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
           +SII+   + G L +  ++   M++  + P +  Y +L+  +   G+ E A  ++ EM+ 
Sbjct: 415 SSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKS 474

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
            G+  N I ++ L+N L R   + +A  L  D+  +GI  + + Y+ L++     GN   
Sbjct: 475 WGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESA 534

Query: 682 ALRLYKEMLDREIEPDYCTHSAL 704
           AL + +EM +++++ D   ++AL
Sbjct: 535 ALSVVQEMTEKDMQFDVVAYNAL 557



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 177/680 (26%), Positives = 301/680 (44%), Gaps = 106/680 (15%)

Query: 117 QPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKIL 176
           + GV  D      +++   + GL++ A W            I+  L+GGG+   +    L
Sbjct: 103 KKGVCFDSVTCNILVKGYCQIGLVQYAEW------------IMGNLVGGGVP--LDAIGL 148

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV------ 230
           + L+  Y +  +V + L +     +NG+ PD+   N ++      G   KA  V      
Sbjct: 149 NTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKRGDLAKAESVVNEILG 208

Query: 231 YRMMGEFGI---------------KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCS 275
           +R   E G+               +P++VT+ T++ ++CK   + +   L  +M   G  
Sbjct: 209 FRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVM 268

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           P+ VT + ++ G  R+G+L +A  L+R+M  +GL  +  SY  II    + G ++EA N 
Sbjct: 269 PDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNH 328

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
           + +MV RG++  L     ++ GL K G+  +A   F  +L+ N++P+ ++Y  LL G+C+
Sbjct: 329 QSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCK 388

Query: 396 SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
            G++  A  +  ++   +++P VVT++++I+G  + G L  A ++   M+   I+P+V  
Sbjct: 389 VGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFV 448

Query: 456 YTIMVNGSCKMGNLSMAREFFNEM-----------------------------------L 480
           Y I+++G  + G    A  F+ EM                                   L
Sbjct: 449 YAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDIL 508

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            KG+  D F Y++ + G  K G+ S A  + +EM  K    D++ YN L  GL +LG   
Sbjct: 509 SKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKY- 567

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           E   +  +M+  G  PD +TY S+++     G      DL N M   G+ P +VTY +LI
Sbjct: 568 EPKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILI 627

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRP---------------------------------- 626
                 G +E       EM   G  P                                  
Sbjct: 628 GGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLN 687

Query: 627 -NVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
            N + YN LI  LCRL    +A  +  +M  +GI  +  TY  LI   C   + ++A   
Sbjct: 688 LNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNT 747

Query: 686 YKEMLDREIEPDYCTHSALL 705
           Y +ML   I P+  T++ALL
Sbjct: 748 YSQMLVSGISPNITTYNALL 767



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 157/569 (27%), Positives = 274/569 (48%), Gaps = 15/569 (2%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G+  D  +  T+++ L ++G  + A  + +T++ +N+           + +CV+   L  
Sbjct: 336 GISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNL-----------VPNCVTYTAL-- 382

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
            L  + K   VE    V  KM +  +LP+V   + II      G   KA EV R M +  
Sbjct: 383 -LDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMN 441

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           I P++  Y  +LD + + G+ + A     EM+  G   N + +++L+    R+G +++A+
Sbjct: 442 IMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQ 501

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            LI+D+L  G+ +   +Y+ ++ GY ++G    AL++ +EM  + +   +  YN L  GL
Sbjct: 502 SLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGL 561

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
            + G+  + +  F  M+   + PD ++YN+++  Y   G    A  L +E++S  ++P +
Sbjct: 562 LRLGKY-EPKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNM 620

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           VTYN LI GLC+ G +E    +   M+  G +P  I +  ++    +        +   +
Sbjct: 621 VTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKK 680

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           ++  GL  ++  Y T I    +LG T +A  +  EM+ KG   D++TYN L+ G C    
Sbjct: 681 LVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSH 740

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           +E+A     +M+  G  P+  TY +++      G +R    L + M  +GL P   TY +
Sbjct: 741 VEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNI 800

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           L+  H   G    +   + EM  KG  P   TYN LI    +  ++ QA  L  +M   G
Sbjct: 801 LVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRG 860

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYK 687
            +PN  TY +LI   C      E  RL K
Sbjct: 861 RIPNSSTYDVLICGWCKLSCQPEMDRLLK 889



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 151/544 (27%), Positives = 262/544 (48%), Gaps = 36/544 (6%)

Query: 197 NKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKE 256
           ++M+  G+  D+  C  ++  L   G S +A E+++ + +  + P+ VTY  +LD  CK 
Sbjct: 330 SQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKV 389

Query: 257 GEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSY 316
           G+++ A  +L +M+     PN VT++ +I G+++ G L +A  ++R M+++ +  +   Y
Sbjct: 390 GDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVY 449

Query: 317 NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
             ++ GY   G    A    +EM + G+      ++IL+  L + G + +A+    ++L 
Sbjct: 450 AILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILS 509

Query: 377 KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
           K +  D+ +Y++L+ GY + GN   A  +  E+  +++   VV YN L  GL R G  E 
Sbjct: 510 KGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYE- 568

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
            + +   MI  G+ PD +TY  ++N     G    A +  NEM   G+ P+   Y   I 
Sbjct: 569 PKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIG 628

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLI-------------------------------- 524
           G  K G   +   +  EMLA G+ P  I                                
Sbjct: 629 GLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNL 688

Query: 525 ---TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
               YN L+  LC+LG  ++AN +L +MV  G   D +TY ++I        + +  + +
Sbjct: 689 NQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTY 748

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
           + ML  G+SP + TY  L+   +  G +  A    SEM+ +G+ PN  TYN L++G  R+
Sbjct: 749 SQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRV 808

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
                +  L+ +M  +G +P   TY +LI +   AG  ++A  L  EML R   P+  T+
Sbjct: 809 GNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGRIPNSSTY 868

Query: 702 SALL 705
             L+
Sbjct: 869 DVLI 872



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 136/466 (29%), Positives = 230/466 (49%), Gaps = 28/466 (6%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           A  F++ +++  G++ +  +F  +L  L  SG ++ A  +++ ++   ++  LDV     
Sbjct: 465 AAGFYKEMKSW-GLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIY--LDVF---N 518

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
            SS         L+  Y K+      L V  +M    +  DV   N + K L   G   +
Sbjct: 519 YSS---------LMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLG-KYE 568

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
            + V+  M E G+ P  VTYN++++++  +G+ + AL+LL EM+  G  PN VTYN+LI 
Sbjct: 569 PKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIG 628

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G  + G +E+   ++ +ML +G   +   +  ++  YS        L + +++V  G+  
Sbjct: 629 GLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNL 688

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
               YN LI  LC+ G    A     EM+ K +  DI++YN L+ GYC   ++ +AF  +
Sbjct: 689 NQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTY 748

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
            ++    + P + TYN L++GL   G +  A +L   M  +G++P+  TY I+V+G  ++
Sbjct: 749 SQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRV 808

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           GN   + + + EM+ KG  P    Y   I    K G   +A  L  EML +G  P+  TY
Sbjct: 809 GNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGRIPNSSTY 868

Query: 527 NVLVHGLCKLGS------------LEEANELLRKMVGDGFIPDHIT 560
           +VL+ G CKL                EA +LLR+M   G +P   T
Sbjct: 869 DVLICGWCKLSCQPEMDRLLKLSYQNEAKKLLREMCEKGHVPSEST 914



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 130/453 (28%), Positives = 217/453 (47%), Gaps = 51/453 (11%)

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M  L L  S   +N ++  ++  G + +   L  EMV  GV P + + N+L++ LCK G 
Sbjct: 1   MRALSLVPSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGD 60

Query: 364 VSDA----RHRFF--------------------------EMLRKNVIPDIISYNTLLYGY 393
           +  A    R+  F                          EM++K V  D ++ N L+ GY
Sbjct: 61  LGLALGYLRNSVFDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGY 120

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
           C+ G +  A  +   L    +    +  NTL+DG C  G +  A  L E+    G+ PD+
Sbjct: 121 CQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDI 180

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLR---------------------KGLQPDRFAYT 492
           +TY  +VN  CK G+L+ A    NE+L                      + LQP    +T
Sbjct: 181 VTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWT 240

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
           T IA   K     + + L E+M+  G  PD++T + +++GLC+ G L EA  LLR+M   
Sbjct: 241 TLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNM 300

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
           G  P+H++YT+II A L+ G +    +  + M+ +G+S  LV  T ++      G+ + A
Sbjct: 301 GLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEA 360

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
              F  +    + PN +TY AL++G C++  ++ A  +   ME+E +LPN  T++ +IN 
Sbjct: 361 EEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIING 420

Query: 673 NCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
               G   +A+ + ++M+   I P+   ++ LL
Sbjct: 421 YAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILL 453


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 170/636 (26%), Positives = 296/636 (46%), Gaps = 27/636 (4%)

Query: 96  VLNRIREKPRI--ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCV 153
           VL R++ +  I  AL +F+ +      K     +  ++E L     +    ++++ +   
Sbjct: 46  VLKRLKHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQM--- 102

Query: 154 NMHGILDVLIGGGLSSCVSIKILDLLLLI---YTKKSMVEQCLLVFNKMLRNGLLPDVKN 210
            + GI          SC      DL + +   Y +    EQ L  F +M    + P VK 
Sbjct: 103 KLEGI----------SCSE----DLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKI 148

Query: 211 CNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQ 270
            N I+  L D         +Y  M + G++P++ TYN +L + CK   +  A +LL EM 
Sbjct: 149 YNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMS 208

Query: 271 GRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLV 330
            +GC P+ V+Y  LI+   + G++++AR L      +    S   YN +I G  ++    
Sbjct: 209 SKGCDPDEVSYTTLISSLCKLGKVKEAREL-----AMSFTPSVPVYNALINGVCKEYTFE 263

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
           EA  L +EM+ +G+ P + +Y  +I  L   G V  +     +M  +   P++ ++ +L+
Sbjct: 264 EAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLI 323

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
            G+   G   EA   +D +    +VP VV YN L+ GLC    L  A  +   M   G  
Sbjct: 324 KGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCC 383

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
           P+V TY+ +++G  K G+L  A E +N M+  G  P+  AYT  +    +    ++AY L
Sbjct: 384 PNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCL 443

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
            E M  +  PP+ +T+N  + GLC  G ++ A ++  +M   G  P+  TY  ++ + L+
Sbjct: 444 IENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLK 503

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
                    L  +M  +G+   LVTY  +I+ +   G L  A     +M V+G +P+ IT
Sbjct: 504 DRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAIT 563

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
            N +I+  C+  +++ A  L   +      P+   YT LI+  C     +EA+   + ML
Sbjct: 564 VNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRML 623

Query: 691 DREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
              I P+  T + L+           AV++L++ ++
Sbjct: 624 SEGISPNVATWNVLVRHLFSNMGHSGAVQFLDASSI 659


>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Brachypodium distachyon]
          Length = 814

 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 162/583 (27%), Positives = 279/583 (47%), Gaps = 47/583 (8%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLR-NGLLPDVKNCNRIIKVL-----RDNGFSV 225
           S+K  + LL    +   +     VF++M     + P+  +   +IK L      D+GF +
Sbjct: 192 SVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGFKI 251

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
            +  ++  + +       V YN ++D+ CK G + EA+ L   M+    +P+ VT+ +LI
Sbjct: 252 LSDLIHAGLQQ---SAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILI 308

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            G  R+    +   L+R+M  LG+  +    N +I  +  KG   EA+ L +EMV++ + 
Sbjct: 309 NGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMK 368

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC-RSGNIGEAFL 404
            T  TYN++   LCK G +  A     EML   +      +N+++ G   R+G +     
Sbjct: 369 STAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVR 428

Query: 405 LFDELRSRNLVPT-----------------------------------VVTYNTLIDGLC 429
           L  E+  R + P                                    + T N LI GLC
Sbjct: 429 LISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLC 488

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
              +++ A ++   M+N+G+  D ITY IM+ G CK   +  A +  ++M+RKG +PD +
Sbjct: 489 EGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAY 548

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
            + + I     LG   EA  L  +M  +G  PD+++Y  ++ G CK   +++ANE L ++
Sbjct: 549 MFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNEL 608

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRL 609
           +  G  P+ + Y ++I      G++     + + M   G+ PT VTY  L+H     G +
Sbjct: 609 MACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLV 668

Query: 610 ELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL 669
           + A   F + +   I   V+ Y  +I GLC++ ++D+A   F +M    I PNK TYT L
Sbjct: 669 DEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTL 728

Query: 670 INENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL--LKQLD 710
           +   C +GN +EA +L+ EM+   I PD  +++ L+    Q+D
Sbjct: 729 MYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGFSQVD 771



 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 142/514 (27%), Positives = 252/514 (49%), Gaps = 1/514 (0%)

Query: 158 ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
           IL  LI  GL         +LL+    K   V++ + +  +M  + + P +     +I  
Sbjct: 251 ILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILING 310

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
           L+ +    +   + R M   GI P+ V  N ++D  C++G   EA+ L  EM  +     
Sbjct: 311 LKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKST 370

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEK-GLLVEALNLE 336
            VTYN++     + GE+E+A  ++ +ML  G+ + +  +N ++ G  ++ G L   + L 
Sbjct: 371 AVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLI 430

Query: 337 EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS 396
            EMV RG+ P  A        LC+  R  +A   + +ML K +  +I + N L++G C  
Sbjct: 431 SEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEG 490

Query: 397 GNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
            N+  A  +   + ++ +    +TYN +I G C+   +E A +L+++MI +G  PD   +
Sbjct: 491 KNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMF 550

Query: 457 TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA 516
             +++  C +G +  A     +M  +G+QPD  +Y T I G  K  D  +A     E++A
Sbjct: 551 NSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMA 610

Query: 517 KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
            G  P+ + YN L+ G  + G++  A  +L  M   G  P ++TY S++H     G +  
Sbjct: 611 CGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDE 670

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
            + +F    +  +   +V YT++I      G+++ A  YF EM+ + I PN ITY  L+ 
Sbjct: 671 AKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMY 730

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
             C+    ++A  LF +M   GI+P+  +Y  L+
Sbjct: 731 AYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLV 764



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/484 (28%), Positives = 251/484 (51%), Gaps = 6/484 (1%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG-RGCSPNGVTYNVLI 285
           A + + ++      PS+ T N +L++  + G +    ++  EM+  +  +PNG +Y  +I
Sbjct: 177 AVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMI 236

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHS--YNPIICGYSEKGLLVEALNLEEEMVTRG 343
               + G+++    ++ D++  GL+ SA +  YN ++    + G + EA+ L+  M    
Sbjct: 237 KALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESR 296

Query: 344 VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF 403
           VAP++ T+ ILI GL +  R  +      EM    + P+ +  N L+  +CR G+  EA 
Sbjct: 297 VAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAI 356

Query: 404 LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
            LFDE+ S+ +  T VTYN +   LC+ G++E A+++ E M++ G+      +  +V G 
Sbjct: 357 RLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGL 416

Query: 464 C-KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT-SEAYRLQEEMLAKGFPP 521
             + G L       +EM+++G++P+  A  T    +L  G    EA  +  +ML KG   
Sbjct: 417 LQRTGRLESVVRLISEMVKRGMKPND-ALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCI 475

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           ++ T N L+HGLC+  +++ A E+LR MV  G   D+ITY  +I    +   +     L 
Sbjct: 476 NIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLR 535

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
           ++M+RKG  P    +  +IHA+   G++E A     +M+++G++P+V++Y  +I+G C+ 
Sbjct: 536 DDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKA 595

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
           + I +A     ++   G+ PN   Y  LI      GN   A+ +   M    I+P   T+
Sbjct: 596 KDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTY 655

Query: 702 SALL 705
            +L+
Sbjct: 656 CSLM 659



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 128/438 (29%), Positives = 222/438 (50%), Gaps = 14/438 (3%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           A+R F  + ++  +K     +  I   L + G +  A  ++E ++   M       I  G
Sbjct: 355 AIRLFDEMVSKE-MKSTAVTYNLIARALCKEGEMERAERILEEMLSTGM------TIHSG 407

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
           L + V   +L        +   +E  + + ++M++ G+ P+        K L       +
Sbjct: 408 LFNSVVAGLLQ-------RTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQE 460

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A  ++  M E G+  +I T N ++   C+   M+ A E+L  M  +G   + +TYN++I 
Sbjct: 461 AVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQ 520

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G  ++ ++E+A  L  DM++ G K  A+ +N II  Y + G + EAL+L  +M   GV P
Sbjct: 521 GCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQP 580

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
            + +Y  +I G CK   +  A     E++   + P+ + YN L+ GY R+GNI  A  + 
Sbjct: 581 DVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVL 640

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
           D + S  + PT VTY +L+  +C  G ++ A+ + E      I   V+ YTIM+ G CK+
Sbjct: 641 DTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKI 700

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G +  A  +F EM  + + P++  YTT +    K G+  EA +L +EM++ G  PD ++Y
Sbjct: 701 GKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSY 760

Query: 527 NVLVHGLCKLGSLEEANE 544
           N LV G  ++ SL++A E
Sbjct: 761 NTLVTGFSQVDSLDKAIE 778



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 120/454 (26%), Positives = 210/454 (46%), Gaps = 36/454 (7%)

Query: 203 GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           G+ P+   CN +I      G   +A  ++  M    +K + VTYN +  + CKEGEM+ A
Sbjct: 331 GITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERA 390

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGF-SRNGELEQARGLIRDMLKLGLK----------- 310
             +L EM   G + +   +N ++ G   R G LE    LI +M+K G+K           
Sbjct: 391 ERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTK 450

Query: 311 ------------------------VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
                                   ++  + N +I G  E   +  A  +   MV +G+  
Sbjct: 451 QLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMEL 510

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
              TYNI+I G CK  ++ +A     +M+RK   PD   +N++++ YC  G + EA  L 
Sbjct: 511 DNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLL 570

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
            +++   + P VV+Y T+IDG C+  D++ A +    ++  G+ P+ + Y  ++ G  + 
Sbjct: 571 GQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRN 630

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           GN+S A    + M   G+QP    Y + +      G   EA  + E+         ++ Y
Sbjct: 631 GNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGY 690

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
            +++ GLCK+G ++EA     +M      P+ ITYT++++A  + G+      LF+ M+ 
Sbjct: 691 TIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVS 750

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
            G+ P  V+Y  L+   +    L+ A    +E+ 
Sbjct: 751 SGIVPDNVSYNTLVTGFSQVDSLDKAIEKAAEIS 784



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 182/379 (48%), Gaps = 6/379 (1%)

Query: 324 SEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR--KNVIP 381
           S +G L  A++    + +R  +P++ T N L+  L + G +  A  + F+ +R  K V P
Sbjct: 169 SARGSLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLG-ATCKVFDEMRDCKTVTP 227

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV--VTYNTLIDGLCRYGDLEVAQQ 439
           +  SY +++   C+ G + + F +  +L    L  +   V YN L+D LC+ G ++ A +
Sbjct: 228 NGYSYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIR 287

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           LK  M    + P ++T+ I++NG  +            EM   G+ P+       I    
Sbjct: 288 LKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHC 347

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           + G  +EA RL +EM++K      +TYN++   LCK G +E A  +L +M+  G      
Sbjct: 348 RKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSG 407

Query: 560 TYTSIIHASLE-MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
            + S++   L+  G L     L + M+++G+ P     T          R + A   + +
Sbjct: 408 LFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLK 467

Query: 619 MQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGN 678
           M  KG+  N+ T NALI+GLC  + +  A  +   M  +G+  +  TY I+I   C    
Sbjct: 468 MLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSK 527

Query: 679 WQEALRLYKEMLDREIEPD 697
            +EAL+L  +M+ +  +PD
Sbjct: 528 IEEALKLRDDMIRKGFKPD 546



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 133/282 (47%), Gaps = 47/282 (16%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF---GIKP 241
           K S +E+ L + + M+R G  PD    N II    D G   K  E   ++G+    G++P
Sbjct: 524 KDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLG---KMEEALHLLGQMKIEGVQP 580

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
            +V+Y T++D +CK  ++Q+A E L E+   G  PN V YN LI G+ RNG +  A G++
Sbjct: 581 DVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVL 640

Query: 302 RDMLKLGLK-----------------------------------VSAHSYNPIICGYSEK 326
             M  +G++                                   V    Y  +I G  + 
Sbjct: 641 DTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKI 700

Query: 327 GLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISY 386
           G + EA+N  EEM +R + P   TY  L+Y  CK G   +A   F EM+   ++PD +SY
Sbjct: 701 GKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSY 760

Query: 387 NTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
           NTL+ G+ +  ++ +A     E+ S      ++T N  +D +
Sbjct: 761 NTLVTGFSQVDSLDKAIEKAAEISS------IMTQNDCLDNV 796


>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
           [Vitis vinifera]
          Length = 644

 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 148/463 (31%), Positives = 247/463 (53%), Gaps = 3/463 (0%)

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
             Y  +++ + KE   Q AL+L+ +M+     P     N L+     + +L  A   +++
Sbjct: 152 TVYGMLVNCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKE 211

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M   GL ++A   +  I GY  +G +     L  EM   G+ P +  Y I+I  LCK   
Sbjct: 212 MKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSL 271

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           + +A    F+M +  V  D +S ++++ GYC+ G   EA    D L   NL P +  +N+
Sbjct: 272 LKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAM---DVLEVFNLSPNIFVFNS 328

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
            I  LC  G++  A ++ ++M   G++PD  +YT M+ G CK+ ++S A ++  +ML++G
Sbjct: 329 FISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRG 388

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           ++P    YT  I    K G+   A  L + M+ +G  PD+++YN L++G  K G L++A 
Sbjct: 389 IRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAF 448

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
           ELL  M   G  PD +TY  +IH  ++ G +   +D+ + + R+G SP +VT+T +I   
Sbjct: 449 ELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGF 508

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
           + +G  E AF+ F  M    + P+V+T +AL+NG CR R + +A  LF  M + G+  + 
Sbjct: 509 SNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAGLKADV 568

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
             Y  LI+  C+ GN  +A  L   M++  I P+  TH AL+L
Sbjct: 569 ILYNSLIHGFCSLGNIDDACHLVSMMIEHGIMPNNITHHALVL 611



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 155/553 (28%), Positives = 274/553 (49%), Gaps = 11/553 (1%)

Query: 93  LVRVLNRIREK---PRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVET 149
           ++++LN + E+     +AL FFRW E   G K      CT++ IL+   +   A  ++  
Sbjct: 63  VMKILNDLFEESTDAALALYFFRWSEYCMGSKHTVESVCTMIHILVSGNMNHKAMDLLLH 122

Query: 150 VVCVN-----MHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGL 204
           ++  N      H I   +        V   +  +L+  Y K++M +  L +  KM    +
Sbjct: 123 LISYNSGEEGWHNIFLKIHETHTKRRVLETVYGMLVNCYVKENMTQVALKLICKMRHLNI 182

Query: 205 LPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALE 264
            P +  CN ++K L ++     A +  + M   G+  +    +  +  +C +G +    +
Sbjct: 183 FPLIGVCNSLLKALLESEQLNLAWDFLKEMKSQGLGLNASIISLFISGYCSQGNIDTGWK 242

Query: 265 LLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYS 324
           LL EM+  G  P+ V Y ++I    +   L++A  ++  M ++G+ + + S + ++ GY 
Sbjct: 243 LLMEMKYLGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYC 302

Query: 325 EKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDII 384
           + G   EA+++ E      ++P +  +N  I  LC  G +  A   F +M    +IPD  
Sbjct: 303 KVGKSEEAMDVLE---VFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCF 359

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
           SY T++ GYC+  +I  A     ++  R + P+V TY  LID  C+ G++E+A+ L + M
Sbjct: 360 SYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRM 419

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
           I +G++PDV++Y  ++NG  K G+L  A E  + M   G+ PD   Y   I G +K G  
Sbjct: 420 ITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLV 479

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
           +EA  + +E+  +GF PD++T+  ++ G    G+ EEA  L   M      PD +T +++
Sbjct: 480 NEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSAL 539

Query: 565 IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
           ++       +     LF+ ML  GL   ++ Y  LIH   + G ++ A    S M   GI
Sbjct: 540 LNGYCRTRCMAEANVLFHKMLDAGLKADVILYNSLIHGFCSLGNIDDACHLVSMMIEHGI 599

Query: 625 RPNVITYNALING 637
            PN IT++AL+ G
Sbjct: 600 MPNNITHHALVLG 612



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/323 (33%), Positives = 175/323 (54%), Gaps = 4/323 (1%)

Query: 204 LLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEAL 263
           L P++   N  I  L  +G  +KA +V++ M E G+ P   +Y TM+  +CK  ++  AL
Sbjct: 319 LSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNAL 378

Query: 264 ELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGY 323
           + L +M  RG  P+  TY +LI    + G +E A  L + M+  GL     SYN ++ GY
Sbjct: 379 KYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGY 438

Query: 324 SEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
            +KG L +A  L   M + GV+P L TYNILI+GL K G V++A+    E+ R+   PD+
Sbjct: 439 GKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDV 498

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
           +++  ++ G+   GN  EAFLLF  +   +L P VVT + L++G CR   +  A  L   
Sbjct: 499 VTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHK 558

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG-ELKLG 502
           M++ G+  DVI Y  +++G C +GN+  A    + M+  G+ P+   +   + G E K  
Sbjct: 559 MLDAGLKADVILYNSLIHGFCSLGNIDDACHLVSMMIEHGIMPNNITHHALVLGYEKKCV 618

Query: 503 DTS---EAYRLQEEMLAKGFPPD 522
           +      A++LQ+ +L  G   +
Sbjct: 619 ENPVERAAFKLQQLLLKYGIQAE 641



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 156/340 (45%), Gaps = 3/340 (0%)

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           Y  L+  Y +      A  L  ++R  N+ P +   N+L+  L     L +A    + M 
Sbjct: 154 YGMLVNCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEMK 213

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
           +QG+  +    ++ ++G C  GN+    +   EM   G++PD  AYT  I    K+    
Sbjct: 214 SQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLLK 273

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           EA  +  +M   G   D ++ + +V G CK+G  EEA ++L         P+   + S I
Sbjct: 274 EATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDVLEVF---NLSPNIFVFNSFI 330

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
                 G++ +   +F +M   GL P   +YT ++  +     +  A  Y  +M  +GIR
Sbjct: 331 SKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIR 390

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           P+V TY  LI+  C+   ++ A  LF  M  EG++P+  +Y  L+N     G+ Q+A  L
Sbjct: 391 PSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFEL 450

Query: 686 YKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
              M    + PD  T++ L+   + +     A + L+ LT
Sbjct: 451 LSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELT 490


>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1114

 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 170/569 (29%), Positives = 286/569 (50%), Gaps = 41/569 (7%)

Query: 177  DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
            ++++  Y+K   +++ + + ++M+ N   PDV   N +I  L       +A +++  M E
Sbjct: 509  NMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKE 568

Query: 237  FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
              +KP++VTYNT+L    K G++QEA+EL   M  +GC PN +T+N L     +N E+  
Sbjct: 569  MKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTL 628

Query: 297  ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
            A  ++  M+ +G      +YN II G  + G + EA+    +M  + V P   T   L+ 
Sbjct: 629  ALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLP 687

Query: 357  GLCKWGRVSDA---------------RHRFFEMLRKNV-----IPDIISYNTLLY--GYC 394
            G+ K G + DA                + F+E L  ++     I + +S++  L   G C
Sbjct: 688  GVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERLVANGIC 747

Query: 395  RSG---------------NIGEAFLLFDEL-RSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
            R G               N   A +LF++  +   + P + TYN LI GL     +E+AQ
Sbjct: 748  RDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQ 807

Query: 439  QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
             +   + N G +PDV TY  +++   K G +    E + EM     +P+   +   I+G 
Sbjct: 808  DVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGL 867

Query: 499  LKLGDTSEAYRLQEEMLA-KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
            +K G+  +A  L  ++++ + F P   TY  L+ GL K G L EA +L   M   G  P+
Sbjct: 868  VKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPN 927

Query: 558  HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
               Y  +I+   + G+      LF  M+++G+ P L TY+VL+      GR++    YF 
Sbjct: 928  CAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFR 987

Query: 618  EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE-GILPNKYTYTILINENCNA 676
            E++  G+ P+V+ YN +INGL +  R+++A  LF +M++  GI P+ YTY  LI     A
Sbjct: 988  ELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIA 1047

Query: 677  GNWQEALRLYKEMLDREIEPDYCTHSALL 705
            G  +EA ++Y E+    +EP+  T +AL+
Sbjct: 1048 GMVEEAGKIYNEIQRAGLEPNVFTFNALI 1076



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 144/518 (27%), Positives = 248/518 (47%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +E+   VF+ M +  +  D      I K L   G   +A    R M EFG   +  +YN 
Sbjct: 136 IEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYNG 195

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++    K     EA+E+   M   G  P+  TY+ L+ G  +  ++E   GL+++M  LG
Sbjct: 196 LIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLG 255

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           LK + +++   I      G + EA  + + M   G  P + TY +LI  LC   ++  A+
Sbjct: 256 LKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAK 315

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F +M      PD ++Y TLL  +  + ++      + E+     VP VVT+  L+D L
Sbjct: 316 EVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDAL 375

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G+   A    + M +QGILP++ TY  ++ G  ++  L  A E F+ M   G++P  
Sbjct: 376 CKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTA 435

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
           + Y   I    K GD+  A    E+M  KG  P+++  N  ++ L K G   EA ++   
Sbjct: 436 YTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYG 495

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           +   G +PD +TY  ++    ++G++     L + M+     P ++    LI+      R
Sbjct: 496 LKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADR 555

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           ++ A+  F  M+   ++P V+TYN L+ GL +  +I +A  LF  M ++G  PN  T+  
Sbjct: 556 VDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNT 615

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
           L +  C       AL++  +M+D    PD  T++ ++ 
Sbjct: 616 LFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIF 653



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 160/562 (28%), Positives = 250/562 (44%), Gaps = 76/562 (13%)

Query: 185  KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
            K   V++   +F +M    L P V   N ++  L  NG   +A E++  M + G  P+ +
Sbjct: 552  KADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTI 611

Query: 245  TYNTMLDSFCKEGEMQEALELLWEMQGRGCS----------------------------- 275
            T+NT+ D  CK  E+  AL++L++M   GC                              
Sbjct: 612  TFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM 671

Query: 276  -----PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG--YSEKGL 328
                 P+ VT   L+ G  + G +E A  +I + L       A+ +   + G   +E G+
Sbjct: 672  KKLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGI 731

Query: 329  LVEALNLEEEMVTRG-------------------------------------VAPTLATY 351
               A++  E +V  G                                     V P L TY
Sbjct: 732  -DNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTY 790

Query: 352  NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
            N+LI GL +   +  A+  F ++     IPD+ +YN LL  Y +SG I E F ++ E+ +
Sbjct: 791  NLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSA 850

Query: 412  RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN-MINQGILPDVITYTIMVNGSCKMGNLS 470
                P  +T+N +I GL + G+++ A  L  + M ++   P   TY  +++G  K G L 
Sbjct: 851  HECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLY 910

Query: 471  MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
             A++ F  M   G +P+   Y   I G  K G+   A  L + M+ +G  PDL TY+VLV
Sbjct: 911  EAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLV 970

Query: 531  HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR-KGL 589
              LC +G ++E     R++   G  PD + Y  II+   +   L     LFN M + +G+
Sbjct: 971  DCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGI 1030

Query: 590  SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
            +P L TY  LI      G +E A   ++E+Q  G+ PNV T+NALI G     + + AY 
Sbjct: 1031 TPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYA 1090

Query: 650  LFIDMEEEGILPNKYTYTILIN 671
            ++  M   G  PN  TY  L N
Sbjct: 1091 VYQTMVTGGFSPNTGTYEQLPN 1112



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 138/504 (27%), Positives = 245/504 (48%)

Query: 202 NGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQE 261
           + L+   + CN +++ LR +G   +   V+ +M +  IK    TY T+      +G +++
Sbjct: 114 SNLVHTTETCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQ 173

Query: 262 ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC 321
           A   L +M+  G   N  +YN LI    ++    +A  + R M+  G + S  +Y+ ++ 
Sbjct: 174 APFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMV 233

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           G  ++  +   + L +EM T G+ P + T+ I I  L + G++++A      M  +   P
Sbjct: 234 GLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGP 293

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           D+++Y  L+   C +  +  A  +F ++++    P  VTY TL+D      DL+   Q  
Sbjct: 294 DVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFW 353

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
             M   G +PDV+T+TI+V+  CK GN   A    + M  +G+ P+   Y T I G L++
Sbjct: 354 SEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRV 413

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
               +A  + + M + G  P   TY V +    K G    A E   KM   G  P+ +  
Sbjct: 414 HRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVAC 473

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
            + +++  + G  R  + +F  +   GL P  VTY +++  ++  G ++ A    SEM  
Sbjct: 474 NASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVE 533

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
               P+VI  N+LIN L +  R+D+A+ +F+ M+E  + P   TY  L+      G  QE
Sbjct: 534 NCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQE 593

Query: 682 ALRLYKEMLDREIEPDYCTHSALL 705
           A+ L++ M+ +   P+  T + L 
Sbjct: 594 AIELFEGMVQKGCPPNTITFNTLF 617



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 150/577 (25%), Positives = 261/577 (45%), Gaps = 27/577 (4%)

Query: 120 VKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLL 179
           +KRD   + TI + L   G LR A + +  +       +L+     GL        + LL
Sbjct: 151 IKRDTNTYLTIFKCLSVKGGLRQAPFALRKMR--EFGFVLNAYSYNGL--------IHLL 200

Query: 180 LLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG---- 235
           L    K     + + V+ +M+ +G  P ++  + ++  L       K R++  +MG    
Sbjct: 201 L----KSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLG------KRRDIESVMGLLKE 250

Query: 236 --EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
               G+KP++ T+   +    + G++ EA E+L  M   GC P+ VTY VLI       +
Sbjct: 251 METLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARK 310

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           L+ A+ +   M     K    +Y  ++  +S+   L        EM   G  P + T+ I
Sbjct: 311 LDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTI 370

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           L+  LCK G   +A  +   M  + ++P++ +YNTL+ G  R   + +A  +FD + S  
Sbjct: 371 LVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLG 430

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           + PT  TY   ID   + GD   A +  E M  +GI P+++     +    K G    A+
Sbjct: 431 VKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAK 490

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
           + F  +   GL PD   Y   +    K+G+  EA +L  EM+     PD+I  N L++ L
Sbjct: 491 QIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTL 550

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
            K   ++EA ++  +M      P  +TY +++    + G ++   +LF  M++KG  P  
Sbjct: 551 YKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNT 610

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
           +T+  L         + LA     +M   G  P+V TYN +I GL +  ++ +A   F  
Sbjct: 611 ITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQ 670

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           M++  + P+  T   L+     AG  ++A ++    L
Sbjct: 671 MKKL-VYPDFVTLCTLLPGVVKAGLIEDAYKIIANFL 706



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 94/181 (51%), Gaps = 1/181 (0%)

Query: 175  ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
            I ++L+  + K    +    +F +M++ G+ PD+K  + ++  L   G   +    +R +
Sbjct: 930  IYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFREL 989

Query: 235  GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM-QGRGCSPNGVTYNVLITGFSRNGE 293
             E G+ P +V YN +++   K   ++EAL L  EM + RG +P+  TYN LI      G 
Sbjct: 990  KESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGM 1049

Query: 294  LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
            +E+A  +  ++ + GL+ +  ++N +I GYS  G    A  + + MVT G +P   TY  
Sbjct: 1050 VEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQ 1109

Query: 354  L 354
            L
Sbjct: 1110 L 1110


>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 154/510 (30%), Positives = 251/510 (49%), Gaps = 36/510 (7%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K     + L     ++  G  PDV  C ++IK   +     KA  V  ++ E   +P + 
Sbjct: 90  KAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEIL-ESHTEPDVF 148

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
            YN ++  FCK  +++ A ++L  M+ RG  P+ VTYN++I      G L   R      
Sbjct: 149 AYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMI------GSLCNRR------ 196

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
            KLGL                      AL + ++++     PT+ TY ILI      G +
Sbjct: 197 -KLGL----------------------ALTVLDQLLLDNCMPTVITYTILIEATIVEGGI 233

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
           ++A     EML + ++PD+ +YN ++ G C+ G +  A  L   L S+   P V++YN L
Sbjct: 234 NEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNIL 293

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           +      G  +  ++L   M ++G  P+ +TY+I+++  C+ G +  A      M+ K L
Sbjct: 294 LRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKEL 353

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            PD ++Y   I+   K G    A  + + M++ G  PD++ YN ++  LCK G+  +A E
Sbjct: 354 TPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALE 413

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           +  K+ G G  P+  +Y ++I A    GD  R   +   M+ KG+ P  +TY  LI    
Sbjct: 414 IFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLC 473

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
             G +E A     +M+  G RP VI+YN ++ GLC++RRID A G+F +M E+G  PN+ 
Sbjct: 474 RDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNET 533

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREI 694
           TY +LI     AG   EA+ L   +  R++
Sbjct: 534 TYILLIEGIGFAGWRTEAMELANSLFSRDV 563



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 139/476 (29%), Positives = 245/476 (51%), Gaps = 1/476 (0%)

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +L+  CK G+  E+L  L  +  +G +P+ +    LI GF     +E+A  ++ ++L+  
Sbjct: 84  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESH 142

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            +    +YN +I G+ +   +  A  +   M  RG  P + TYNI+I  LC   ++  A 
Sbjct: 143 TEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 202

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               ++L  N +P +I+Y  L+      G I EA  L +E+ +R L+P + TYN +I G+
Sbjct: 203 TVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 262

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G +E A +L  ++ ++G  PDVI+Y I++      G      +   EM  +G +P++
Sbjct: 263 CKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 322

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             Y+  I+   + G   EA  + + M+ K   PD  +Y+ L+  LCK G L+ A  ++  
Sbjct: 323 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 382

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M+ +G +PD + Y +I+ A  + G+  +  ++FN +   G  P + +Y  +I A  + G 
Sbjct: 383 MISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGD 442

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
              A      M  KGI P+ ITYN+LI+ LCR   +++A GL  DME+ G  P   +Y I
Sbjct: 443 RSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNI 502

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           ++   C      +A+ ++ EM+++   P+  T+  L+       ++  A+E   SL
Sbjct: 503 VLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSL 558



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 118/385 (30%), Positives = 196/385 (50%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K + +E    V N+M   G LPD+   N +I  L +      A  V   +      P+
Sbjct: 157 FCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPT 216

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           ++TY  ++++   EG + EA++LL EM  RG  P+  TYN +I G  + G +E+A  LI 
Sbjct: 217 VITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELIT 276

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            +   G +    SYN ++  +  +G   E   L  EM +RG  P   TY+ILI  LC++G
Sbjct: 277 SLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFG 336

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R+ +A      M+ K + PD  SY+ L+   C+ G +  A  + D + S   +P +V YN
Sbjct: 337 RIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYN 396

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           T++  LC+ G+   A ++   +   G  P+V +Y  M++     G+ S A      M+ K
Sbjct: 397 TILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISK 456

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G+ PD   Y + I+   + G   EA  L ++M   GF P +I+YN+++ GLCK+  +++A
Sbjct: 457 GIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDA 516

Query: 543 NELLRKMVGDGFIPDHITYTSIIHA 567
             +  +M+  G  P+  TY  +I  
Sbjct: 517 IGMFAEMIEKGCRPNETTYILLIEG 541



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/361 (30%), Positives = 191/361 (52%), Gaps = 4/361 (1%)

Query: 158 ILDVLIGGGLSSCVSIKILDLLLLIYT-KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK 216
           +LD L+   L +C+   I   +L+  T  +  + + + +  +ML  GLLPD+   N II+
Sbjct: 204 VLDQLL---LDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIR 260

Query: 217 VLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSP 276
            +   G   +A E+   +   G +P +++YN +L +F  +G+  E  +L+ EM  RGC P
Sbjct: 261 GMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEP 320

Query: 277 NGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLE 336
           N VTY++LI+   R G +++A  +++ M++  L    +SY+P+I    ++G L  A+ + 
Sbjct: 321 NKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIM 380

Query: 337 EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS 396
           + M++ G  P +  YN ++  LCK G  + A   F ++      P++ SYNT++      
Sbjct: 381 DYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSC 440

Query: 397 GNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
           G+   A  +   + S+ + P  +TYN+LI  LCR G +E A  L ++M   G  P VI+Y
Sbjct: 441 GDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISY 500

Query: 457 TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA 516
            I++ G CK+  +  A   F EM+ KG +P+   Y   I G    G  +EA  L   + +
Sbjct: 501 NIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFS 560

Query: 517 K 517
           +
Sbjct: 561 R 561



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 119/227 (52%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +++ + V   M+   L PD  + + +I  L   G    A  +   M   G  P IV YNT
Sbjct: 338 IDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNT 397

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +L + CK G   +ALE+  +++G GC PN  +YN +I+     G+  +A G++  M+  G
Sbjct: 398 ILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKG 457

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           +     +YN +I      GL+ EA+ L ++M   G  PT+ +YNI++ GLCK  R+ DA 
Sbjct: 458 IDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAI 517

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
             F EM+ K   P+  +Y  L+ G   +G   EA  L + L SR+++
Sbjct: 518 GMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVI 564



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 122/253 (48%)

Query: 198 KMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG 257
           +M   G  P+    + +I  L   G   +A  V ++M E  + P   +Y+ ++ + CKEG
Sbjct: 312 EMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEG 371

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
            +  A+ ++  M   GC P+ V YN ++    +NG   QA  +   +  +G   +  SYN
Sbjct: 372 RLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYN 431

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            +I      G    AL +   M+++G+ P   TYN LI  LC+ G V +A     +M + 
Sbjct: 432 TMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQS 491

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
              P +ISYN +L G C+   I +A  +F E+  +   P   TY  LI+G+   G    A
Sbjct: 492 GFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEA 551

Query: 438 QQLKENMINQGIL 450
            +L  ++ ++ ++
Sbjct: 552 MELANSLFSRDVI 564



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 121/252 (48%), Gaps = 30/252 (11%)

Query: 129 TILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSM 188
           ++L+++IE  L    Y     +  +   G LD+ IG                        
Sbjct: 343 SVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIG------------------------ 378

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
                 + + M+ NG LPD+ N N I+  L  NG + +A E++  +   G  P++ +YNT
Sbjct: 379 ------IMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNT 432

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           M+ +    G+   AL ++  M  +G  P+ +TYN LI+   R+G +E+A GL+ DM + G
Sbjct: 433 MISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSG 492

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            + +  SYN ++ G  +   + +A+ +  EM+ +G  P   TY +LI G+   G  ++A 
Sbjct: 493 FRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAM 552

Query: 369 HRFFEMLRKNVI 380
                +  ++VI
Sbjct: 553 ELANSLFSRDVI 564



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 8/217 (3%)

Query: 516 AKGFPPDLITYNV-------LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
           A+  P  L +Y+        L++  CK G   E+   L  +V  G+ PD I  T +I   
Sbjct: 64  AEARPAHLQSYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGF 123

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
               ++ +   +   +L     P +  Y  +I       ++E A    + M+ +G  P++
Sbjct: 124 FNFKNIEKASRVME-ILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDI 182

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
           +TYN +I  LC  R++  A  +   +  +  +P   TYTILI      G   EA++L +E
Sbjct: 183 VTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEE 242

Query: 689 MLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
           ML R + PD  T++A++     +     A E + SLT
Sbjct: 243 MLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLT 279


>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
          Length = 845

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 159/573 (27%), Positives = 286/573 (49%), Gaps = 40/573 (6%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           +I   ++L+  Y +    +  L +  ++L+NGL PD  + + I   ++D G   KA  ++
Sbjct: 175 TIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKD-GEVDKAHCLF 233

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M E G+ P I+  N+++   CK  EM +A  ++ +M   G +P+  TY+++I G  ++
Sbjct: 234 LEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKS 293

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
             +++A  ++  M++ G + ++ +YN +I GYS  G+  E++ + ++M + GV PT+   
Sbjct: 294 KAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNC 353

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNT----------------------- 388
           N  I+ L K GR ++A+  F  M+ K   PDIISY+T                       
Sbjct: 354 NSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHNIFNL 413

Query: 389 ---------------LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
                          L+  Y R G + +A L+F++++++ ++P  VT+ T+I  LCR G 
Sbjct: 414 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 473

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           L+ A     +M++ G+ P    Y  ++ G C  G L  A+E  +EM+ K + P    Y +
Sbjct: 474 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 533

Query: 494 QIAGEL-KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
            I   L K G  +E   + + M+  G  P+++T+N L+ G C +G++EEA  LL  M   
Sbjct: 534 SIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 593

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
           G  P+   Y +++    + G +     +F +ML KG+ PT V Y++++H      R   A
Sbjct: 594 GIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 653

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
              F EM   G   ++ TY  ++ GLCR    D+A  L   +    +  +  T+ I+I+ 
Sbjct: 654 KKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISA 713

Query: 673 NCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
               G  QEA  L+  +    + P+  T+S ++
Sbjct: 714 MFKVGRRQEAKELFDAISTYGLVPNIQTYSMMI 746



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 136/469 (28%), Positives = 243/469 (51%), Gaps = 5/469 (1%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P+I TYN ++D + +       L ++  +   G  P+  +Y+ LI GF ++GE+++A  L
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 232

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
             +M++ G+       N II    +   + +A ++ ++MV  G+AP L TY+++I GLCK
Sbjct: 233 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 292

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
              +  A     +M+     P+ I+YN+L++GY  SG   E+  +F ++ S  ++PTV  
Sbjct: 293 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 352

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK---MGNLSMAREFFN 477
            N+ I  L ++G    A+ + ++M+ +G  PD+I+Y+   +  C         M    FN
Sbjct: 353 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHNIFN 412

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            ML KG+ P++  +   I    + G   +A  + E+M  KG  PD +T+  ++  LC++G
Sbjct: 413 LMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIG 472

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY- 596
            L++A      MV  G  P    Y  +I      G+L + ++L + M+ K + P  V Y 
Sbjct: 473 RLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYF 532

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
           + +I+     GR+         M   G RPNV+T+N+L+ G C +  +++A+ L   M  
Sbjct: 533 SSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMAS 592

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            GI PN Y Y  L++  C  G   +AL ++++ML + ++P    +S +L
Sbjct: 593 IGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIIL 641



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 154/599 (25%), Positives = 283/599 (47%), Gaps = 24/599 (4%)

Query: 93  LVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVC 152
           +++ L +++E  +      + V++  G+  D F +  I++ L +S  +  A  V+E +V 
Sbjct: 251 IIKELCKMKEMDKAESIVQKMVDS--GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMV- 307

Query: 153 VNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCN 212
                       G   + ++    + L+  Y+   M  + + VF +M   G++P V NCN
Sbjct: 308 ----------EAGTRPNSIT---YNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCN 354

Query: 213 RIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWE---- 268
             I  L  +G + +A+ ++  M   G KP I++Y+T     C        + ++W     
Sbjct: 355 SFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYW--YVTVVWVMWHNIFN 412

Query: 269 -MQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKG 327
            M  +G +PN   +N+LI  ++R G +++A  +  DM   G+     ++  +I      G
Sbjct: 413 LMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIG 472

Query: 328 LLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISY- 386
            L +AL+    MV  GV P+ A Y  LI G C  G +  A+    EM+ K++ P  + Y 
Sbjct: 473 RLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYF 532

Query: 387 NTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMIN 446
           ++++   C+ G + E   + D +      P VVT+N+L++G C  G++E A  L + M +
Sbjct: 533 SSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMAS 592

Query: 447 QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSE 506
            GI P+   Y  +V+G CK G +  A   F +ML KG++P    Y+  + G  +   T+ 
Sbjct: 593 IGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTA 652

Query: 507 AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
           A ++  EM+  G    + TY V++ GLC+    +EAN LL K+       D IT+  +I 
Sbjct: 653 AKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVIS 712

Query: 567 ASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRP 626
           A  ++G  +  ++LF+ +   GL P + TY+++I         E A   F  ++  G   
Sbjct: 713 AMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHAS 772

Query: 627 NVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           +    N ++  L     + +A      + E  +     T ++L +     G ++E ++L
Sbjct: 773 DSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKL 831



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 113/377 (29%), Positives = 200/377 (53%), Gaps = 4/377 (1%)

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
           R   PT+ TYNILI    +  R          +L+  + PD  SY +L+YG+ + G + +
Sbjct: 170 RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSY-SLIYGFVKDGEVDK 228

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           A  LF E+  + ++P ++  N++I  LC+  +++ A+ + + M++ GI PD+ TY+++++
Sbjct: 229 AHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIID 288

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
           G CK   +  A     +M+  G +P+   Y + I G    G  +E+ R+ ++M + G  P
Sbjct: 289 GLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIP 348

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT---SIIHASLEMGDLRRGR 578
            +   N  +H L K G   EA  +   MV  G  PD I+Y+   S +             
Sbjct: 349 TVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWH 408

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           ++FN ML KG++P    + +LI+A+A  G ++ A + F +MQ KG+ P+ +T+  +I+ L
Sbjct: 409 NIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSL 468

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
           CR+ R+D A   F  M + G+ P++  Y  LI   CN G   +A  L  EM++++I P  
Sbjct: 469 CRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPG 528

Query: 699 CTHSALLLKQLDKDYKV 715
             + + ++  L K+ +V
Sbjct: 529 VKYFSSIINNLCKEGRV 545


>gi|224136366|ref|XP_002326842.1| predicted protein [Populus trichocarpa]
 gi|222835157|gb|EEE73592.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 147/480 (30%), Positives = 245/480 (51%)

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           +A E+   M E G++PS      +     + G+     +LL  M  +G  P    +N +I
Sbjct: 97  EALEIVGRMREVGLRPSSSAITILFKLLLRIGDHGSVWKLLRGMIHQGPRPCNRNFNAVI 156

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            GF R G ++    L+  M K   +   ++YN +I  Y  +G   +AL     M+  G  
Sbjct: 157 LGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAYCTRGQTFDALGWMRFMIDNGCT 216

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P+L T+  +I   C  G + +AR+ F  M     IP+++ YNTL+ GY ++ +IG+A +L
Sbjct: 217 PSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANML 276

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
           ++E++S+ + P   T+N L+ G  RYG  E   +L  ++   G L     Y I V+G C 
Sbjct: 277 YEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCW 336

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
            G L  A +F  +ML KG+ P   A+ + IA   + G   +AY+    M+  G  P  +T
Sbjct: 337 AGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLT 396

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
            + L+ GL KL  L+EA +LL +M+ +G   +   +T ++     MGD+     L+N M 
Sbjct: 397 CSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEME 456

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
            +G+ P  V ++  I+  +  G ++ A+  F +M  KG  PN   YN+LI G C   R+ 
Sbjct: 457 GRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQ 516

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +A  L  +M  +G+LP+ +T  I+IN  C  G  + A  +++ M    + PD  T++ L+
Sbjct: 517 EALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLI 576



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 151/537 (28%), Positives = 264/537 (49%), Gaps = 3/537 (0%)

Query: 169 SCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR 228
           S  +I IL  LLL       V + L     M+  G  P  +N N +I      G      
Sbjct: 113 SSSAITILFKLLLRIGDHGSVWKLL---RGMIHQGPRPCNRNFNAVILGFCRKGHVKVGE 169

Query: 229 EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
            +  +M +F  +P +  YN +++++C  G+  +AL  +  M   GC+P+ VT+  +I  F
Sbjct: 170 SLLCVMQKFKCQPDVYAYNILINAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAF 229

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
              G + +AR L   M + G   +   YN ++ GY +   + +A  L EEM ++ VAP  
Sbjct: 230 CNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDC 289

Query: 349 ATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDE 408
            T+NIL+ G  ++GR  D      ++ +   +     YN  + G C +G + EA    ++
Sbjct: 290 TTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLED 349

Query: 409 LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
           +  + + PTVV +N++I    R G  E A +    M+  G+ P  +T + ++ G  K+  
Sbjct: 350 MLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWR 409

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
           L  AR+   EM+ +GL  ++ A+T  + G  ++GD + AY L  EM  +G  PD + ++ 
Sbjct: 410 LQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSA 469

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
            ++GL  +G ++EA ++  +M   GF+P++  Y S+I      G L+    L   M RKG
Sbjct: 470 FINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKG 529

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
           L P + T  ++I+     GR++ A   F  M   G+ P+++TYN LI+G C+        
Sbjct: 530 LLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDGYCKAFDTVSTD 589

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            +   M   G  P+  TY I ++  C       A+ + +E++   + PD  T++ ++
Sbjct: 590 EVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAVMMLEELISAGVVPDTVTYNTVM 646



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 140/501 (27%), Positives = 248/501 (49%), Gaps = 1/501 (0%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           ++L+  Y  +      L     M+ NG  P +     +I    + G  ++AR ++  M E
Sbjct: 188 NILINAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKE 247

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G  P++V YNT+++ + K  ++ +A  L  EM+ +  +P+  T+N+L+ G  R G  E 
Sbjct: 248 AGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREED 307

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
              L+RD+ + G    +  YN  + G    G L EA+   E+M+ +G+ PT+  +N +I 
Sbjct: 308 RDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIA 367

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
              + G    A   +  M++  + P  ++ ++L+ G  +   + EA  L  E+    L  
Sbjct: 368 AYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPI 427

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
               +  L+DG  R GD+  A  L   M  +GI PD + ++  +NG   +G +  A + F
Sbjct: 428 NKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVF 487

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
            +M +KG  P+ F Y + I G    G   EA  L+ EM  KG  PD+ T N++++GLCK 
Sbjct: 488 LQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKE 547

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G ++ A+++ R M   G IPD +TY ++I    +  D     ++ N M   G  P + TY
Sbjct: 548 GRMKSASDVFRNMHHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTY 607

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
            + +H      ++  A M   E+   G+ P+ +TYN ++NG+C    +++A  +   + +
Sbjct: 608 NIRLHGLCTGRKMSRAVMMLEELISAGVVPDTVTYNTVMNGVCT-DVLERAMIVTAKLLK 666

Query: 657 EGILPNKYTYTILINENCNAG 677
              +PN  T  +L++  C  G
Sbjct: 667 MAFVPNVVTANLLLSHFCKQG 687



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 115/354 (32%), Positives = 180/354 (50%), Gaps = 3/354 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +++ +     ML  G+ P V   N II      G   KA + YRMM +FG+ PS +T ++
Sbjct: 340 LDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSS 399

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++    K   +QEA +LL+EM   G   N   + +L+ G+ R G++  A  L  +M   G
Sbjct: 400 LIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRG 459

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           +   A +++  I G S  GL+ EA ++  +M  +G  P    YN LI G C  GR+ +A 
Sbjct: 460 IHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEAL 519

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               EM RK ++PDI + N ++ G C+ G +  A  +F  +    L+P +VTYNTLIDG 
Sbjct: 520 MLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDGY 579

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+  D     ++   M   G  PD+ TY I ++G C    +S A     E++  G+ PD 
Sbjct: 580 CKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAVMMLEELISAGVVPDT 639

Query: 489 FAYTTQIAGELKLGDTSE-AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
             Y T + G     D  E A  +  ++L   F P+++T N+L+   CK G  E+
Sbjct: 640 VTYNTVMNGVCT--DVLERAMIVTAKLLKMAFVPNVVTANLLLSHFCKQGMPEK 691



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/339 (25%), Positives = 148/339 (43%), Gaps = 7/339 (2%)

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
           RH  FE        D    +TL+ G+ +     EA  +   +R   L P+      L   
Sbjct: 71  RHAEFE-------SDFSVLDTLMRGFLKVEMGCEALEIVGRMREVGLRPSSSAITILFKL 123

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           L R GD     +L   MI+QG  P    +  ++ G C+ G++ +       M +   QPD
Sbjct: 124 LLRIGDHGSVWKLLRGMIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQKFKCQPD 183

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
            +AY   I      G T +A      M+  G  P L+T+  +++  C  G++ EA  L  
Sbjct: 184 VYAYNILINAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFD 243

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
            M   G IP+ + Y ++++  ++  D+ +   L+  M  K ++P   T+ +L+  H   G
Sbjct: 244 GMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYG 303

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
           R E       ++   G       YN  ++GLC    +D+A     DM E+GI P    + 
Sbjct: 304 REEDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFN 363

Query: 668 ILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
            +I     AG  ++A + Y+ M+   + P   T S+L++
Sbjct: 364 SIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIM 402


>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 450

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 144/417 (34%), Positives = 213/417 (51%), Gaps = 5/417 (1%)

Query: 197 NKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKE 256
           NKM+  GL  DV     I+  +   G +  A  +   M E  IKP +V Y+ ++D  CK+
Sbjct: 34  NKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKD 93

Query: 257 GEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSY 316
           G   +A  L  EM  +G +PN  TYN +I GF   G    A+ L+RDM++  +     ++
Sbjct: 94  GHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTF 153

Query: 317 NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
           N +I    ++G L EA  L +EM+ R + P   TYN +IYG CK  R  DA+H F  M  
Sbjct: 154 NALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS 213

Query: 377 KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
               PD++++NT++  YCR+  + E   L  E+  R LV    TYNTLI G C   +L  
Sbjct: 214 ----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNA 269

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
           AQ L + MI+ G+ PD IT  I++ G C+   L  A E F  +    +  D  AY   I 
Sbjct: 270 AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIH 329

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
           G  K     EA+ L   +   G  PD+ TYNV++ G C   ++ +AN L  KM  +G  P
Sbjct: 330 GMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEP 389

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
           D+ TY ++I   L+ G++ +  +L + M   G S    T   ++      GRL+ +F
Sbjct: 390 DNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLITDGRLDKSF 445



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 132/438 (30%), Positives = 230/438 (52%), Gaps = 4/438 (0%)

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M E G+ P ++T+NT+++  C EG + EA  L+ +M G+G   + VTY  ++ G  + G+
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
            + A  L+  M +  +K     Y+ II    + G   +A  L  EM+ +G+AP + TYN 
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           +I G C +GR SDA+    +M+ + + PD++++N L+    + G + EA  L DE+  R 
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           + P  VTYN++I G C++   + A+ + + M +    PDV+T+  +++  C+   +    
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGM 236

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
           +   E+ R+GL  +   Y T I G  ++ + + A  L +EM++ G  PD IT N+L++G 
Sbjct: 237 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 296

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
           C+   LEEA EL   +       D + Y  IIH   +   +    DLF ++   G+ P +
Sbjct: 297 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 356

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
            TY V+I     +  +  A + F +M+  G  P+  TYN LI G  +   ID++  L  +
Sbjct: 357 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 416

Query: 654 MEEEGILPNKYTYTILIN 671
           M   G   + +T  ++ +
Sbjct: 417 MRSNGFSGDAFTIKMVAD 434



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 124/423 (29%), Positives = 227/423 (53%), Gaps = 7/423 (1%)

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M+++GL     ++N +I G   +G ++EA  L  +MV +G+   + TY  ++ G+CK G 
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
              A +   +M   ++ PD++ Y+ ++   C+ G+  +A  LF E+  + + P V TYN 
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           +IDG C +G    AQ+L  +MI + I PDV+T+  +++ S K G L  A +  +EML + 
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           + PD   Y + I G  K     +A  + + M +    PD++T+N ++   C+   ++E  
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGM 236

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
           +LLR++   G + +  TY ++IH   E+ +L   +DLF  M+  G+ P  +T  +L++  
Sbjct: 237 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 296

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
               +LE A   F  +Q+  I  + + YN +I+G+C+  ++D+A+ LF  +   G+ P+ 
Sbjct: 297 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 356

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL---LKQLDKDYKVHAVEY 720
            TY ++I+  C      +A  L+ +M D   EPD  T++ L+   LK  + D  +  +  
Sbjct: 357 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 416

Query: 721 LES 723
           + S
Sbjct: 417 MRS 419



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 128/417 (30%), Positives = 208/417 (49%), Gaps = 4/417 (0%)

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA 332
           G +P  +T+N LI G    G + +A  L+  M+  GL +   +Y  I+ G  + G    A
Sbjct: 5   GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 64

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
           LNL  +M    + P +  Y+ +I  LCK G  SDA++ F EML K + P++ +YN ++ G
Sbjct: 65  LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDG 124

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
           +C  G   +A  L  ++  R + P V+T+N LI    + G L  A++L + M+++ I PD
Sbjct: 125 FCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPD 184

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
            +TY  M+ G CK      A+  F+ M      PD   + T I    +     E  +L  
Sbjct: 185 TVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLR 240

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           E+  +G   +  TYN L+HG C++ +L  A +L ++M+  G  PD IT   +++   E  
Sbjct: 241 EISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENE 300

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
            L    +LF  +    +    V Y ++IH      +++ A+  F  + + G+ P+V TYN
Sbjct: 301 KLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYN 360

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
            +I+G C    I  A  LF  M++ G  P+  TY  LI     AG   +++ L  EM
Sbjct: 361 VMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 417



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 105/313 (33%), Positives = 162/313 (51%), Gaps = 4/313 (1%)

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           L P V+T+NTLI+GLC  G +  A  L   M+ +G+  DV+TY  +VNG CKMG+   A 
Sbjct: 6   LTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSAL 65

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
              ++M    ++PD   Y+  I    K G  S+A  L  EML KG  P++ TYN ++ G 
Sbjct: 66  NLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGF 125

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
           C  G   +A  LLR M+     PD +T+ ++I AS++ G L     L + ML + + P  
Sbjct: 126 CSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT 185

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
           VTY  +I+      R + A   F  M      P+V+T+N +I+  CR +R+D+   L  +
Sbjct: 186 VTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLRE 241

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDY 713
           +   G++ N  TY  LI+  C   N   A  L++EM+   + PD  T + LL    + + 
Sbjct: 242 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEK 301

Query: 714 KVHAVEYLESLTL 726
              A+E  E + +
Sbjct: 302 LEEALELFEVIQM 314



 Score = 47.8 bits (112), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 4/122 (3%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K S V++   +F  +  +G+ PDV+  N +I           A  ++  M + G +P   
Sbjct: 333 KGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNS 392

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TYNT++    K GE+ +++EL+ EM+  G S +  T   ++     +G L+++     DM
Sbjct: 393 TYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLITDGRLDKS---FSDM 448

Query: 305 LK 306
           L 
Sbjct: 449 LS 450


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 149/497 (29%), Positives = 253/497 (50%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
           FN M      P   + N+I+  L +      A  +Y+ M    ++P   T N +++ FC 
Sbjct: 46  FNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCH 105

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
            G++  A   + ++   G  PN +T N L+ G    G++++A      +L  G ++S  S
Sbjct: 106 FGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGIS 165

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           Y  +I G  + G    A+ L   +    + P +  Y+++I  LCK   V +A   + EM+
Sbjct: 166 YGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMV 225

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
            K + PD+++Y+ L+ G+C  G +  A  L +E+   N+ P + TY  L+D LC+ G ++
Sbjct: 226 GKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVK 285

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            A+ +   M+   +  DV+ Y+ +++G C +  ++ A+  F  M + G+ PD   Y+  I
Sbjct: 286 EAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMI 345

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
            G  K+    EA  L EE+  K   PD +TY  L+  LCK G +    +L  +M+  G  
Sbjct: 346 NGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQP 405

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           PD ITY ++I A  + G L R   LFN M  + + P + T+T+L+      GRL+ A  +
Sbjct: 406 PDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEF 465

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
           F ++  KG   NV TY  +INGLC+   +D+A  L   ME+ G + +  T+ I+I    +
Sbjct: 466 FQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFD 525

Query: 676 AGNWQEALRLYKEMLDR 692
                +A +L +EM+ R
Sbjct: 526 KDENDKAEKLVREMIAR 542



 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 145/472 (30%), Positives = 242/472 (51%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P    +N +L S         A+ L  +M+     P+  T N++I  F   G++  A   
Sbjct: 56  PHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSG 115

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  +LKLG + +  + N ++ G   +G + EAL   ++++ +G   +  +Y ILI G+CK
Sbjct: 116 VSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCK 175

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G    A      + R ++ P+++ Y+ ++   C+   + EA+ L+ E+  + + P VVT
Sbjct: 176 IGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVT 235

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y+ L+ G C  G L  A  L   M+ + I PD+ TYTI+V+  CK G +  A      M+
Sbjct: 236 YSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMV 295

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           +  +  D   Y+T + G   + + + A R+   M   G  PD+  Y+++++GLCK+  ++
Sbjct: 296 KACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVD 355

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA  L  ++     +PD +TYTS+I    + G +    DLF+ ML +G  P ++TY  LI
Sbjct: 356 EALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLI 415

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
            A    G L+ A   F++M+ + IRPNV T+  L++GLC++ R+  A   F D+  +G  
Sbjct: 416 DALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYC 475

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
            N  TYT++IN  C  G   EAL L   M D     D  T   ++    DKD
Sbjct: 476 LNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKD 527



 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 145/455 (31%), Positives = 236/455 (51%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           PD    N II      G  V A      + + G +P+ +T NT++   C EG+++EAL  
Sbjct: 91  PDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRF 150

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
             ++  +G   +G++Y +LI G  + GE   A  L+R + +  ++ +   Y+ II    +
Sbjct: 151 HDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCK 210

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
             L+ EA +L  EMV +G++P + TY+IL+ G C  G+++ A     EM+ +N+ PDI +
Sbjct: 211 DTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYT 270

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           Y  L+   C+ G + EA  +   +    +   VV Y+TL+DG C   ++  A+++   M 
Sbjct: 271 YTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMT 330

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
             G+ PDV  Y+IM+NG CK+  +  A   F E+ +K + PD   YT+ I    K G  S
Sbjct: 331 QMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRIS 390

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
             + L +EML +G PPD+ITYN L+  LCK G L+ A  L  KM      P+  T+T ++
Sbjct: 391 YVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILL 450

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
               ++G L+   + F ++L KG    + TYTV+I+     G L+ A    S M+  G  
Sbjct: 451 DGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCI 510

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
            + +T+  +I         D+A  L  +M   G+L
Sbjct: 511 SDAVTFEIMIRAFFDKDENDKAEKLVREMIARGLL 545



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 154/564 (27%), Positives = 283/564 (50%), Gaps = 41/564 (7%)

Query: 27  FFP-FCFSVHTYPSISESNNKDSVLNPESESYYKELIISTVEEKPWAFCNNRWVSDHFQA 85
           F P  CF  H+ P ++  +N D  ++  +  ++       V   P  F        HF  
Sbjct: 21  FLPNLCFHSHSLPPLT--HNADDAVSQFNHMFH-------VHPTPHTF--------HFN- 62

Query: 86  VVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYW 145
                ++L+ ++N ++  P  A+  ++ +E    V+ D F    I+      G +  A+ 
Sbjct: 63  -----KILISLVN-VKRYPT-AISLYKQMELSE-VEPDYFTLNIIINCFCHFGQVVLAF- 113

Query: 146 VVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLL 205
                      G+  +L  G   + +++  L   L +  K   V++ L   +K+L  G  
Sbjct: 114 ----------SGVSKILKLGYQPNTITLNTLMKGLCLEGK---VKEALRFHDKVLAQGFR 160

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
               +   +I  +   G +  A  + R +  + I+P++V Y+ ++D  CK+  + EA +L
Sbjct: 161 LSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDL 220

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
             EM G+G SP+ VTY++L++GF   G+L +A  L+ +M+   +    ++Y  ++    +
Sbjct: 221 YTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCK 280

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
           +G + EA N+   MV   V   +  Y+ L+ G C    V++A+  F+ M +  V PD+  
Sbjct: 281 EGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHC 340

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           Y+ ++ G C+   + EA  LF+E+  +N+VP  VTY +LID LC+ G +     L + M+
Sbjct: 341 YSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEML 400

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
           ++G  PDVITY  +++  CK G+L  A   FN+M  + ++P+ + +T  + G  K+G   
Sbjct: 401 DRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLK 460

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
            A    +++L KG+  ++ TY V+++GLCK G L+EA  L  +M  +G I D +T+  +I
Sbjct: 461 NALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMI 520

Query: 566 HASLEMGDLRRGRDLFNNMLRKGL 589
            A  +  +  +   L   M+ +GL
Sbjct: 521 RAFFDKDENDKAEKLVREMIARGL 544



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 119/355 (33%), Positives = 194/355 (54%)

Query: 201 RNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQ 260
           R  + P+V   + II  L  +    +A ++Y  M   GI P +VTY+ ++  FC  G++ 
Sbjct: 191 RWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLN 250

Query: 261 EALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII 320
            A++LL EM     +P+  TY +L+    + G++++A  ++  M+K  + +    Y+ ++
Sbjct: 251 RAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLM 310

Query: 321 CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
            GY     +  A  +   M   GV P +  Y+I+I GLCK  RV +A + F E+ +KN++
Sbjct: 311 DGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMV 370

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           PD ++Y +L+   C+SG I   + LFDE+  R   P V+TYN LID LC+ G L+ A  L
Sbjct: 371 PDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIAL 430

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
              M +Q I P+V T+TI+++G CK+G L  A EFF ++L KG   +   YT  I G  K
Sbjct: 431 FNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCK 490

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
            G   EA  LQ  M   G   D +T+ +++         ++A +L+R+M+  G +
Sbjct: 491 EGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGLL 545



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 179/376 (47%), Gaps = 35/376 (9%)

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            DA  +F  M   +  P    +N +L           A  L+ ++    + P   T N +
Sbjct: 40  DDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNII 99

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           I+  C +G + +A      ++  G  P+ IT   ++ G C  G +  A  F +++L +G 
Sbjct: 100 INCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGF 159

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
           +    +Y   I G  K+G+T  A RL   +      P+++ Y++++  LCK   ++EA +
Sbjct: 160 RLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYD 219

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           L  +MVG G  PD +TY+ ++     +G L R  DL N M+ + ++P + TYT+L+ A  
Sbjct: 220 LYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALC 279

Query: 605 ARGRLE-----LAFM------------------------------YFSEMQVKGIRPNVI 629
             G+++     LA M                               F  M   G+ P+V 
Sbjct: 280 KEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVH 339

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
            Y+ +INGLC+++R+D+A  LF ++ ++ ++P+  TYT LI+  C +G       L+ EM
Sbjct: 340 CYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEM 399

Query: 690 LDREIEPDYCTHSALL 705
           LDR   PD  T++ L+
Sbjct: 400 LDRGQPPDVITYNNLI 415


>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 686

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 147/501 (29%), Positives = 254/501 (50%), Gaps = 2/501 (0%)

Query: 222 GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGC-SPNGVT 280
           G     R  + ++     +P   T+N  + +    G++ EA+ +L  M   G  +PN  +
Sbjct: 131 GRHADVRGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFS 190

Query: 281 YNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV 340
           YNV+I G  + G    A  L  +M +  +  +  +YN +I G+ +KG L     L  +M+
Sbjct: 191 YNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQML 250

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
             G+ P + TYN+L+ GLC+ GR+ +      EM  + ++PD  +Y+ L  G+ R+G+  
Sbjct: 251 RHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQ 310

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
               LF+E   + +     T + L++GLC+ G +  A+++ + ++N G+L   + Y  ++
Sbjct: 311 TMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLI 370

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
           NG C++G+L  A   F +M  + ++PD   Y   I G  K+   +EA+ L  EM   G  
Sbjct: 371 NGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVN 430

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           P + T+N L+    + G LE+   +L  M   G  P+ ++Y SI++A  + G +     +
Sbjct: 431 PSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAI 490

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
            ++M  K + P    Y  +I A+   G  + AFM   +M+  G+ P+++TYN LI GLC+
Sbjct: 491 LDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCK 550

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
             +I +A  L   +   G+ P+  +Y  LI+  C   N   AL L KEM    I+P   T
Sbjct: 551 QSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRT 610

Query: 701 HSALLLKQLDKDYKVHAVEYL 721
           +  +L   L    +VH +E L
Sbjct: 611 YR-MLFSSLGGAGRVHEMENL 630



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 142/471 (30%), Positives = 237/471 (50%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F++M    ++P+    N +I      G       ++  M   G+KP+++TYN +L   C
Sbjct: 210 LFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLC 269

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           + G M E   +L EM  R   P+G TY++L  G SR G+ +    L  + +K G+K+ A+
Sbjct: 270 RAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAY 329

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           + + ++ G  + G + +A  + + +V  G+  T   YN LI G C+ G +  A   F +M
Sbjct: 330 TCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQM 389

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
             + + PD I+YN L+ G  +   I EA  L  E+    + P+V T+NTLID   R G L
Sbjct: 390 KSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQL 449

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           E    +  +M  +G+ P+V++Y  +VN  CK G +  A    ++M  K + P    Y   
Sbjct: 450 EKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAI 509

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I   ++ G T +A+ L E+M + G PP ++TYN+L+ GLCK   + EA ELL  +   G 
Sbjct: 510 IDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGL 569

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            PD I+Y ++I A     +  R  +L   M + G+ P+  TY +L  +    GR+     
Sbjct: 570 APDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMEN 629

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
            + +M  K + P    YN +++   +     +   L  +M ++GI    YT
Sbjct: 630 LYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGIAVGDYT 680



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 152/492 (30%), Positives = 246/492 (50%), Gaps = 1/492 (0%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGI-KPSIVTYNTMLDSFCKEGEMQEALE 264
           PD    N+ ++     G   +A  + R MG  G   P+  +YN ++    K G   +A++
Sbjct: 150 PDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVK 209

Query: 265 LLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYS 324
           L  EM  +   PN +TYN +I G  + G+LE    L   ML+ GLK +  +YN ++ G  
Sbjct: 210 LFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLC 269

Query: 325 EKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDII 384
             G + E   + +EM +R + P   TY+IL  G  + G        F E ++K V     
Sbjct: 270 RAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAY 329

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
           + + LL G C+ G I +A  +   L +  L+ T V YNTLI+G C+ GDLE A  + + M
Sbjct: 330 TCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQM 389

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
            ++ I PD ITY  ++NG  K+  ++ A +   EM + G+ P    + T I    + G  
Sbjct: 390 KSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQL 449

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
            + + +  +M  KG  P++++Y  +V+  CK G + EA  +L  M     +P    Y +I
Sbjct: 450 EKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAI 509

Query: 565 IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
           I A +E G   +   L   M   G+ P++VTY +LI     + ++  A      ++  G+
Sbjct: 510 IDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGL 569

Query: 625 RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
            P+VI+YN LI+  C     D+A  L  +M + GI P+  TY +L +    AG   E   
Sbjct: 570 APDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMEN 629

Query: 685 LYKEMLDREIEP 696
           LY++MLD+++ P
Sbjct: 630 LYQQMLDKDVVP 641



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 130/435 (29%), Positives = 229/435 (52%), Gaps = 3/435 (0%)

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV-APTLAT 350
           G     RG    ++    +    ++N  +      G L EA+ +   M   G  AP   +
Sbjct: 131 GRHADVRGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFS 190

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           YN++I GL K G   DA   F EM  K V+P+ I+YNT++ G+ + G++   F L+ ++ 
Sbjct: 191 YNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQML 250

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
              L P V+TYN L+ GLCR G +     + + M ++ ++PD  TY+I+ +G  + G+  
Sbjct: 251 RHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQ 310

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
                F E ++KG++   +  +  + G  K G  S+A  + + ++  G     + YN L+
Sbjct: 311 TMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLI 370

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
           +G C++G LE A  + ++M      PDHITY ++I+   ++  +    DL   M + G++
Sbjct: 371 NGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVN 430

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           P++ T+  LI A+   G+LE  F+  S+MQ KG++PNV++Y +++N  C+  +I +A  +
Sbjct: 431 PSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAI 490

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLD 710
             DM  + +LP    Y  +I+     G+  +A  L ++M    + P   T++ LL+K L 
Sbjct: 491 LDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYN-LLIKGLC 549

Query: 711 KDYKV-HAVEYLESL 724
           K  ++  A E L+SL
Sbjct: 550 KQSQISEAEELLDSL 564



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 179/368 (48%), Gaps = 14/368 (3%)

Query: 117 QPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKIL 176
           + GVK   +    +L  L + G +  A  V++T+V     G+L   +           I 
Sbjct: 321 KKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLV---NSGLLQTTV-----------IY 366

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           + L+  Y +   +E    +F +M    + PD    N +I  L       +A ++   M +
Sbjct: 367 NTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEK 426

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G+ PS+ T+NT++D++ + G++++   +L +MQ +G  PN V+Y  ++  F +NG++ +
Sbjct: 427 NGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILE 486

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  ++ DM    +   A  YN II  Y E G   +A  L E+M + GV P++ TYN+LI 
Sbjct: 487 AVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIK 546

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           GLCK  ++S+A      +    + PD+ISYNTL+   C   N   A  L  E+    + P
Sbjct: 547 GLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKP 606

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
           +  TY  L   L   G +   + L + M+++ ++P    Y IMV+   K G  S      
Sbjct: 607 SPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALR 666

Query: 477 NEMLRKGL 484
            EM  KG+
Sbjct: 667 KEMSDKGI 674



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 165/342 (48%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +LL    K   + +   V   ++ +GLL      N +I      G    A  +++ M   
Sbjct: 333 ILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSR 392

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
            I+P  +TYN +++   K   + EA +L+ EM+  G +P+  T+N LI  + R G+LE+ 
Sbjct: 393 LIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKC 452

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             ++ DM + GLK +  SY  I+  + + G ++EA+ + ++M  + V P    YN +I  
Sbjct: 453 FIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDA 512

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
             + G    A     +M    V P I++YN L+ G C+   I EA  L D LR+  L P 
Sbjct: 513 YIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPD 572

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           V++YNTLI   C   + + A +L++ M   GI P   TY ++ +     G +      + 
Sbjct: 573 VISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQ 632

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           +ML K + P    Y   +    K G+ S+   L++EM  KG 
Sbjct: 633 QMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGI 674



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 105/229 (45%), Gaps = 14/229 (6%)

Query: 117 QPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKIL 176
           + G+K +   + +I+    ++G       ++E V  ++   I DVL G         ++ 
Sbjct: 461 EKGLKPNVVSYGSIVNAFCKNG------KILEAVAILDDMFIKDVLPGA--------QVY 506

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           + ++  Y +    +Q  ++  KM  +G+ P +   N +IK L       +A E+   +  
Sbjct: 507 NAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRN 566

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
           +G+ P +++YNT++ + C       ALEL  EM   G  P+  TY +L +     G + +
Sbjct: 567 YGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHE 626

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
              L + ML   +   +  YN ++  Y++ G   +   L +EM  +G+A
Sbjct: 627 MENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGIA 675



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/198 (23%), Positives = 85/198 (42%), Gaps = 18/198 (9%)

Query: 118 PGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILD 177
           PG +    V+  I++  IE G    A+ + E +    +                SI   +
Sbjct: 501 PGAQ----VYNAIIDAYIECGSTDQAFMLAEKMKSSGVP--------------PSIVTYN 542

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           LL+    K+S + +   + + +   GL PDV + N +I        + +A E+ + M + 
Sbjct: 543 LLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKC 602

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           GIKPS  TY  +  S    G + E   L  +M  +   P    YN+++  +++ GE  + 
Sbjct: 603 GIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKV 662

Query: 298 RGLIRDMLKLGLKVSAHS 315
             L ++M   G+ V  ++
Sbjct: 663 EALRKEMSDKGIAVGDYT 680


>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 825

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 145/473 (30%), Positives = 240/473 (50%), Gaps = 1/473 (0%)

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
           +  M + G  P+  TYNT++++ CK   + +A   L  M+  G +P+  TYN L+ G  R
Sbjct: 78  FGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCR 137

Query: 291 NGELEQARGLIRDM-LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
            G L  A GL   M  + G     +SY  +I G    G + +A  +  +M      P + 
Sbjct: 138 AGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVH 197

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           TY +L+ GLCK  RV +A     EM+ K V+P++++YN L+ G C+ G   +   L +++
Sbjct: 198 TYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKM 257

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
             +   P   TY  ++ GLC++G +    ++    I +G+  +V+TY  ++NG CK G++
Sbjct: 258 EIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDM 317

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A +    M R  + P    +   I G    G   +A     +M   G  P+ +T+N L
Sbjct: 318 KAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSL 377

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           + G C +G  + A  LL  M   G +PD  TY   I A  + G L     LF+ +  KG+
Sbjct: 378 ISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGI 437

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
               V YT L+H +   G ++ AF    +M  +   P+V TYN LI+GLC+++R+D+A  
Sbjct: 438 KAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAID 497

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
           L   M+++GI P   T+ ILI +        +A ++Y++M+    +PD  T++
Sbjct: 498 LLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYT 550



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 163/499 (32%), Positives = 245/499 (49%), Gaps = 9/499 (1%)

Query: 239 IKPSIV-TYNTMLDSFCKEGE----MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           + PS V ++N  L ++   G     +   L     M   G  PN  TYN LI    +   
Sbjct: 46  LDPSDVRSHNAALIAYSSRGSRAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLAL 105

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR-GVAPTLATYN 352
           L  AR  +  M + GL     +YN ++ G    GLL  A  L  +M  R G      +Y 
Sbjct: 106 LADARAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYT 165

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
           ILI GLC  GR+ DA   F +M R    P + +Y  LL G C+   +GEA  L  E+ ++
Sbjct: 166 ILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNK 225

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
            +VP VVTYN LI GLC+ G  +   +L E M  Q   PD  TYT +V+G CK G +   
Sbjct: 226 GVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHG 285

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
            +  +E + KG+  +   Y   I G  K GD   A  + + M      P + T+N ++HG
Sbjct: 286 AKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHG 345

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
            C  G + +A   L +M G G  P+ +T+ S+I     +G+ +    L + M   G+ P 
Sbjct: 346 FCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPD 405

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
             TY + I A    G+LE A   FS + +KGI+ + + Y +L++G C++  ID A+GL  
Sbjct: 406 RQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLME 465

Query: 653 DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQL--D 710
            M  E  +P+ +TY  LI+  C       A+ L  +M  + IEP  CT + +L+KQ+  D
Sbjct: 466 KMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFN-ILIKQMLWD 524

Query: 711 KDYKVHAVEYLESLTLGAE 729
           K +   A  Y + ++ G +
Sbjct: 525 KKHADAAKMYEQMISSGCK 543



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 159/524 (30%), Positives = 246/524 (46%), Gaps = 17/524 (3%)

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
           +IK L   G    A  V+  M     +P + TY  +LD  CK   + EA  LL EM  +G
Sbjct: 167 LIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKG 226

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
             PN VTYN LI G  + G  +    L+  M          +Y  ++ G  + G +    
Sbjct: 227 VVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGA 286

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
            +  E + +GVA  + TYN LI G CK G +  A      M R  V P + ++N +++G+
Sbjct: 287 KVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGF 346

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
           C  G + +A     ++    L P  VT+N+LI G C  G+ ++A +L + M   G+LPD 
Sbjct: 347 CCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDR 406

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
            TY I ++  C  G L  A   F+ +  KG++     YT+ + G  ++GD   A+ L E+
Sbjct: 407 QTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEK 466

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           M ++   PD+ TYN L+ GLCK+  L+ A +LL KM   G  P   T+  +I   L    
Sbjct: 467 MASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKK 526

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG--RLELAFMYFSEMQVKGIRPNVITY 631
                 ++  M+  G  P   TYT+ I      G  + E   M   EM   G+ P+V TY
Sbjct: 527 HADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETY 586

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGN---------WQ-- 680
           NA+I         ++A+   + M    I P+  TY+IL+N  CN  +         W+  
Sbjct: 587 NAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMV 646

Query: 681 ---EALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYL 721
                  L+++M + +  P   T+ A LL+ L    ++  VE+L
Sbjct: 647 DVRNLQELFEQMCESDAAPGISTYKA-LLRGLCNQCRLEEVEWL 689



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 156/532 (29%), Positives = 248/532 (46%), Gaps = 11/532 (2%)

Query: 193 LLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDS 252
           L  F  ML++G  P+    N +I           AR     M E G+ P   TYN ++  
Sbjct: 75  LASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLG 134

Query: 253 FCKEGEMQEALELLWEMQGR-GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKV 311
            C+ G +  A  L  +M  R G   +  +Y +LI G    G ++ A  +   M +   + 
Sbjct: 135 LCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRP 194

Query: 312 SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRF 371
             H+Y  ++ G  +   + EA  L  EMV +GV P + TYN LI GLC+ GR  D     
Sbjct: 195 GVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLL 254

Query: 372 FEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY 431
            +M  +   PD  +Y  +++G C+ G +G    +  E   + +   V+TYN LI+G C+ 
Sbjct: 255 EKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKG 314

Query: 432 GD----LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           GD    L+V Q +K N +N    P V T+  +++G C  G +  A  F  +M   GL P+
Sbjct: 315 GDMKAALDVLQLMKRNRVN----PGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPN 370

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              + + I+G+  +G+   A RL + M   G  PD  TY + +  LC  G LEEA+ L  
Sbjct: 371 TVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFS 430

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
            +   G    ++ YTS++H   ++GD+     L   M  +   P + TY  LI       
Sbjct: 431 CLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVK 490

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
           RL+ A     +M+ +GI P   T+N LI  +   ++   A  ++  M   G  P+K TYT
Sbjct: 491 RLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYT 550

Query: 668 ILINENCNAGNWQEA--LRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHA 717
           + I+ +   G  +E        EM +  + PD  T++A++   +D   K  A
Sbjct: 551 LKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKA 602



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 141/502 (28%), Positives = 239/502 (47%), Gaps = 18/502 (3%)

Query: 206 PDVKNCNRIIKVLRDNG-FSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALE 264
           PD     +++  L  +G     A+ ++  +G+ G+   ++TYN +++ +CK G+M+ AL+
Sbjct: 264 PDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGK-GVALEVLTYNALINGYCKGGDMKAALD 322

Query: 265 LLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYS 324
           +L  M+    +P   T+N +I GF   G++ +A   +  M   GL  +  ++N +I G  
Sbjct: 323 VLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQC 382

Query: 325 EKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDII 384
             G    AL L + M   GV P   TY I I  LC  G++ +A   F  +  K +    +
Sbjct: 383 SVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNV 442

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
            Y +L++GYC+ G+I  AF L +++ S N +P V TYNTLIDGLC+   L+ A  L + M
Sbjct: 443 IYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKM 502

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
             QGI P   T+ I++         + A + + +M+  G +PD+  YT +I+ +   G T
Sbjct: 503 KKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGAT 562

Query: 505 SEAY--RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
            E        EM   G  PD+ TYN ++      G  E+A     KM+     PD  TY+
Sbjct: 563 KEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYS 622

Query: 563 SIIH--------------ASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
            +++                 +M D+R  ++LF  M     +P + TY  L+     + R
Sbjct: 623 ILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCR 682

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           LE       +MQ   I  +    + L+   C L    +A   F  M  +   P   +  +
Sbjct: 683 LEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCL 742

Query: 669 LINENCNAGNWQEALRLYKEML 690
           L++  C++G+   A+ ++ +ML
Sbjct: 743 LLSGLCDSGDHGMAVSIFSDML 764



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 134/522 (25%), Positives = 245/522 (46%), Gaps = 24/522 (4%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIK---PSIVTYNTMLD 251
           +  +M+  G++P+V   N +I  L   G   +  +V +++ +  I+   P   TY  ++ 
Sbjct: 218 LLGEMVNKGVVPNVVTYNALIGGLCQEG---RFDDVTKLLEKMEIQRHSPDCWTYTQVVH 274

Query: 252 SFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKV 311
             CK G++    ++L E  G+G +   +TYN LI G+ + G+++ A  +++ M +  +  
Sbjct: 275 GLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNP 334

Query: 312 SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRF 371
              ++N +I G+   G + +A+    +M   G++P   T+N LI G C  G    A    
Sbjct: 335 GVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLL 394

Query: 372 FEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY 431
             M    V+PD  +Y   +   C  G + EA  LF  L  + +    V Y +L+ G C+ 
Sbjct: 395 DLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQV 454

Query: 432 GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAY 491
           GD++ A  L E M ++  +PDV TY  +++G CK+  L  A +  ++M ++G++P    +
Sbjct: 455 GDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTF 514

Query: 492 TTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN--ELLRKM 549
              I   L     ++A ++ E+M++ G  PD  TY + +      G+ +E N    + +M
Sbjct: 515 NILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEM 574

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRL 609
              G  PD  TY +II A ++ G   +       ML   + P   TY++L++    +   
Sbjct: 575 HEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDS 634

Query: 610 ELAF---------------MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           + AF                 F +M      P + TY AL+ GLC   R+++   L + M
Sbjct: 635 D-AFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKM 693

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
           +   IL ++     L+   CN   ++EA   ++ M  +  +P
Sbjct: 694 QGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQP 735



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 103/471 (21%), Positives = 175/471 (37%), Gaps = 86/471 (18%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V + +    +M   GL P+    N +I      G    A  +  +M E+G+ P   TY  
Sbjct: 352 VHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAI 411

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
            +D+ C EG+++EA  L   +  +G   + V Y  L+ G+ + G+++ A GL+  M    
Sbjct: 412 FIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASEN 471

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
                H+YN +I G  +   L  A++L ++M  +G+ PT  T+NILI  +    + +DA 
Sbjct: 472 CMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAA 531

Query: 369 HRF-------------------------------------FEMLRKNVIPDIISYNTLLY 391
             +                                      EM    V PD+ +YN ++ 
Sbjct: 532 KMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIK 591

Query: 392 GYCRSGNIGEAFL----------------------------------------------- 404
            Y  +G   +AF                                                
Sbjct: 592 AYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNL 651

Query: 405 --LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
             LF+++   +  P + TY  L+ GLC    LE  + L   M    IL D      ++  
Sbjct: 652 QELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGC 711

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            C +     A E F  M  +  QP   +    ++G    GD   A  +  +ML  G+  D
Sbjct: 712 YCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYD 771

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
            + + +L+  L + G      E+L  M     +    TY S++    E+ +
Sbjct: 772 EVVWKLLIDCLHEKGHAGACLEMLSVMDAKKCVASTRTYASLVRLVAELNE 822


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 145/481 (30%), Positives = 234/481 (48%), Gaps = 12/481 (2%)

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
           GE G+  S      ++   C+  +     +L  EM   G        N L+TG +R G  
Sbjct: 262 GEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNF 321

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM--------VTRGVAP 346
            +   L+  M+++ ++ +  ++  +I    +   + +AL + E+M        ++  V P
Sbjct: 322 NRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEP 381

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLR--KNVIPDIISYNTLLYGYCRSGNIGEAFL 404
            +  YN LI GLCK GR  +      E +R  K   PD I+YN L+ G+C++G I +   
Sbjct: 382 DVVIYNTLIDGLCKVGRQQEGLG-LMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKE 440

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
           LFDE+    + P VVT NTL+ G+CR G +  A         +G+  D +TYT ++N  C
Sbjct: 441 LFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFC 500

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
            + N   A E FNEML+ G  PD   Y T I+G  + G  ++A  +  E+   G  PD +
Sbjct: 501 NVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTV 560

Query: 525 TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM 584
            YN L+ G C+        E+L++M   G  PD ITY ++I  + + GDL+  + +   M
Sbjct: 561 CYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKM 620

Query: 585 LRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG-IRPNVITYNALINGLCRLRR 643
           ++ G+ PT+ TY  +I+A+   G    A   F +M+    + PN + YN LIN LC+  +
Sbjct: 621 IKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNK 680

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSA 703
           +  A  L  DM+  G+ PN  TY  +     +  + ++       M++    PDY T   
Sbjct: 681 VKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEI 740

Query: 704 L 704
           L
Sbjct: 741 L 741



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 161/577 (27%), Positives = 268/577 (46%), Gaps = 28/577 (4%)

Query: 171 VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNC---NRIIKVLRDNGFSVKA 227
           +++     LL    +  +VE+ L++FN      L P VKN    N  + +L  +G    A
Sbjct: 155 LTVNAASFLLRASGRSELVEESLILFND-----LDPSVKNTYLRNVWLSILLRSGRVKDA 209

Query: 228 ----REVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALE------LLWEMQGRGCSPN 277
                E++    +   +P+  T + +     K    +E L       L+ +    G   +
Sbjct: 210 LKVIDEMFESNDDSNCRPNDATGDILFSFLLKRERNEELLSEDEIVNLVLKFGEHGVLIS 269

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
                 LIT   RN +  +   L  +M+KLG  + + + N ++ G + +G       L E
Sbjct: 270 SFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELME 329

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM--------LRKNVIPDIISYNTL 389
           +MV   + P + T+ ILI  +CK+ RV DA     +M        +  +V PD++ YNTL
Sbjct: 330 KMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTL 389

Query: 390 LYGYCRSGNIGEAFLLFDELRS-RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
           + G C+ G   E   L + +RS +   P  +TYN LIDG C+ G++E  ++L + M  +G
Sbjct: 390 IDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEG 449

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
           + P+V+T   +V G C+ G +S A  FF E  R+G++ D   YT  I     + +  +A 
Sbjct: 450 VAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAM 509

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
            L  EML  G  PD I Y  L+ G  + G + +A+ +L ++   G  PD + Y ++I   
Sbjct: 510 ELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGF 569

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
                  R  ++   M   GL P  +TY  LI   +  G L+ A     +M   G+ P V
Sbjct: 570 CRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTV 629

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEG-ILPNKYTYTILINENCNAGNWQEALRLYK 687
            TY A+IN  C     ++A  +F DM+    + PN   Y ILIN  C     + A+ L +
Sbjct: 630 ATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLME 689

Query: 688 EMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           +M    + P+  T++A+     D+       E+++ +
Sbjct: 690 DMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRM 726



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 136/467 (29%), Positives = 223/467 (47%), Gaps = 10/467 (2%)

Query: 213 RIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR 272
           R+I  L  N  + +  +++  M + G        N++L    +EG      EL+ +M   
Sbjct: 275 RLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEM 334

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDML----KLGLKVSAHS----YNPIICGYS 324
              PN VT+ +LI    +   ++ A  ++  M       G+ VS       YN +I G  
Sbjct: 335 DIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLC 394

Query: 325 EKGLLVEALNLEEEMVT-RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
           + G   E L L E M + +G AP   TYN LI G CK G +   +  F EM ++ V P++
Sbjct: 395 KVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNV 454

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
           ++ NTL+ G CR+G +  A   F E + R +    VTY  LI+  C   + E A +L   
Sbjct: 455 VTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNE 514

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           M+  G  PD I Y  +++G  + G ++ A     E+ + G++PD   Y T I G  +   
Sbjct: 515 MLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNK 574

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
               + + +EM   G  PD ITYN L+    K G L+ A +++RKM+  G +P   TY +
Sbjct: 575 FHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGA 634

Query: 564 IIHASLEMGDLRRGRDLFNNM-LRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
           +I+A    G+     ++F +M     + P  V Y +LI++     +++ A     +M++ 
Sbjct: 635 VINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIW 694

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL 669
           G+ PN  TYNA+  GL   + +++ +     M E    P+  T  IL
Sbjct: 695 GVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEIL 741



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 116/374 (31%), Positives = 189/374 (50%), Gaps = 2/374 (0%)

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG-RGCSPNGVTYNVLITGFSRNGELEQA 297
           ++P +V YNT++D  CK G  QE L L+  M+  +GC+P+ +TYN LI GF + GE+E+ 
Sbjct: 379 VEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKG 438

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
           + L  +M K G+  +  + N ++ G    G +  A+N   E   RG+     TY  LI  
Sbjct: 439 KELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINA 498

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
            C       A   F EML+    PD I Y TL+ G+ ++G + +A  +  EL+   + P 
Sbjct: 499 FCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPD 558

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
            V YNTLI G CR        ++ + M   G+ PD ITY  ++  + K G+L  A++   
Sbjct: 559 TVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMR 618

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM-LAKGFPPDLITYNVLVHGLCKL 536
           +M++ G+ P    Y   I      G+ +EA  + ++M  A   PP+ + YN+L++ LCK 
Sbjct: 619 KMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKN 678

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
             ++ A  L+  M   G  P+  TY +I     +  DL +  +  + M+    +P  +T 
Sbjct: 679 NKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITM 738

Query: 597 TVLIHAHAARGRLE 610
            +L    +A G +E
Sbjct: 739 EILTEWLSAVGEIE 752



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 216/462 (46%), Gaps = 10/462 (2%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F +M++ G + +   CN ++  L   G   +  E+   M E  I+P++VT+  +++  C
Sbjct: 292 LFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMC 351

Query: 255 KEGEMQEALELLWEMQGRGCS--------PNGVTYNVLITGFSRNGELEQARGLIRDML- 305
           K   + +ALE+L +M G   S        P+ V YN LI G  + G  ++  GL+  M  
Sbjct: 352 KFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRS 411

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
           + G      +YN +I G+ + G + +   L +EM   GVAP + T N L+ G+C+ GRVS
Sbjct: 412 QKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVS 471

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
            A + F E  R+ +  D ++Y  L+  +C   N  +A  LF+E+      P  + Y TLI
Sbjct: 472 SAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLI 531

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
            G  + G +  A  +   +   GI PD + Y  ++ G C+        E   EM   GL+
Sbjct: 532 SGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLK 591

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           PD   Y T IA   K GD   A ++  +M+  G  P + TY  +++  C  G+  EA E+
Sbjct: 592 PDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEI 651

Query: 546 LRKMVGDGFI-PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
            + M     + P+ + Y  +I++  +   ++    L  +M   G++P   TY  +     
Sbjct: 652 FKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLR 711

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
               LE  F +   M      P+ IT   L   L  +  I++
Sbjct: 712 DEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIER 753



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 142/543 (26%), Positives = 237/543 (43%), Gaps = 87/543 (16%)

Query: 239 IKPSIV-TY--NTMLDSFCKEGEMQEALELLWEM----QGRGCSPNGVTYNVLITGF--- 288
           + PS+  TY  N  L    + G +++AL+++ EM        C PN  T ++L +     
Sbjct: 183 LDPSVKNTYLRNVWLSILLRSGRVKDALKVIDEMFESNDDSNCRPNDATGDILFSFLLKR 242

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
            RN EL     ++  +LK G                E G+L+ +  +             
Sbjct: 243 ERNEELLSEDEIVNLVLKFG----------------EHGVLISSFWMGR----------- 275

Query: 349 ATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDE 408
                LI  LC+  + +     F EM++   + +  + N+LL G  R GN      L ++
Sbjct: 276 -----LITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEK 330

Query: 409 LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM--------INQGILPDVITYTIMV 460
           +   ++ P VVT+  LI+ +C++  ++ A ++ E M        I+  + PDV+ Y  ++
Sbjct: 331 MVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLI 390

Query: 461 NGSCKMGNLSMAREFFNEML-RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           +G CK+G           M  +KG  PD   Y   I G  K G+  +   L +EM  +G 
Sbjct: 391 DGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGV 450

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
            P+++T N LV G+C+ G +  A     +    G   D +TYT++I+A   + +  +  +
Sbjct: 451 APNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAME 510

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
           LFN ML+ G SP  + Y  LI   +  GR+  A    +E++  GIRP+ + YN LI G C
Sbjct: 511 LFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFC 570

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILI----------------------------- 670
           R  +  + + +  +MEE G+ P+  TY  LI                             
Sbjct: 571 RTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVA 630

Query: 671 ------NENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVH-AVEYLES 723
                 N  C  GN  EA+ ++K+M      P       +L+  L K+ KV  AV  +E 
Sbjct: 631 TYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMED 690

Query: 724 LTL 726
           + +
Sbjct: 691 MKI 693



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 188/406 (46%), Gaps = 20/406 (4%)

Query: 158 ILDVLIGGGLSSCVSIKILDLLLLIYT------KKSMVEQCLLVFNKML-RNGLLPDVKN 210
           +L+ + GG  S  +S+ +   +++  T      K    ++ L +  +M  + G  PD   
Sbjct: 362 VLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTIT 421

Query: 211 CNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQ 270
            N +I      G   K +E++  M + G+ P++VT NT++   C+ G +  A+    E Q
Sbjct: 422 YNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQ 481

Query: 271 GRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLV 330
            RG   + VTY  LI  F      E+A  L  +MLK G    A  Y  +I G+S+ G + 
Sbjct: 482 RRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMA 541

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK----NVIPDIISY 386
           +A  +  E+   G+ P    YN LI G C+  +     HR FEML++     + PD I+Y
Sbjct: 542 DASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKF----HRVFEMLKEMEEAGLKPDTITY 597

Query: 387 NTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM-I 445
           NTL+    ++G++  A  +  ++    +VPTV TY  +I+  C  G+   A ++ ++M  
Sbjct: 598 NTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKA 657

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
              + P+ + Y I++N  CK   +  A     +M   G+ P+   Y     G     D  
Sbjct: 658 ASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLE 717

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
           + +   + M+     PD IT  +L   L  +G +E     L+K V 
Sbjct: 718 KVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIER----LKKFVA 759


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 140/480 (29%), Positives = 243/480 (50%), Gaps = 3/480 (0%)

Query: 213 RIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR 272
           R ++ L  NG   +       M   G  P ++    ++  FCK G  + A +++  ++  
Sbjct: 84  RHLRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEES 143

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA 332
           G   +  +YNVLI+G+ ++GE+E+A   +R + ++G+  +A +Y+ ++C   ++G L +A
Sbjct: 144 GAVIDVTSYNVLISGYCKSGEIEEA---LRVLDRMGVSPNAATYDAVLCSLCDRGKLKQA 200

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
           + +    +     P + T  +LI   CK   V  A   F EM  K   PD+++YN L+ G
Sbjct: 201 MQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKG 260

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
           +C+ G + EA     +L S    P V+++N ++  LC  G    A +L   M+ +G LP 
Sbjct: 261 FCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPS 320

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
           V+T+ I++N  C+ G L  A      M + G  P+  ++   I G         A    E
Sbjct: 321 VVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLE 380

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
            M+++G  PD++TYN+L+  LCK G +++A  +L ++   G  P  I+Y ++I   L++G
Sbjct: 381 IMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVG 440

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
                 +L   M  KGL P L+T T ++   +  G++  A  +F  ++   IRPN   YN
Sbjct: 441 KAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYN 500

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
           ++I GLC+ ++   A     DM  +G  P + TYT LI      G  ++A +L  E+  R
Sbjct: 501 SIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSR 560



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 136/449 (30%), Positives = 215/449 (47%), Gaps = 21/449 (4%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           M   G  PDV  C  +I+     G +  A ++  ++ E G    + +YN ++  +CK GE
Sbjct: 105 MTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGE 164

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           ++EAL +L  M   G SPN  TY+ ++      G+L+QA      M  LG ++ +  Y  
Sbjct: 165 IEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQA------MQVLGRQLQSKCYPD 215

Query: 319 II---------CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
           ++         C  S  G   +A+ L  EM  +G  P + TYN+LI G CK GR+ +A  
Sbjct: 216 VVTCTVLIDATCKESGVG---QAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIR 272

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
              ++      PD+IS+N +L   C  G   +A  L   +  +  +P+VVT+N LI+ LC
Sbjct: 273 FLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLC 332

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
           + G L  A  + E M   G  P+  ++  ++ G C    +  A E+   M+ +G  PD  
Sbjct: 333 QKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIV 392

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
            Y   +    K G   +A  +  ++ +KG  P LI+YN ++ GL K+G  E A ELL +M
Sbjct: 393 TYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEM 452

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRL 609
              G  PD IT TS++      G +R     F+ + R  + P    Y  +I       + 
Sbjct: 453 CYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQT 512

Query: 610 ELAFMYFSEMQVKGIRPNVITYNALINGL 638
            LA  + ++M  KG +P   TY  LI G+
Sbjct: 513 SLAIDFLADMVAKGCKPTEATYTTLIKGI 541



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 119/379 (31%), Positives = 199/379 (52%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           D +L     +  ++Q + V  + L++   PDV  C  +I          +A +++  M  
Sbjct: 185 DAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRN 244

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G KP +VTYN ++  FCK G + EA+  L ++   GC P+ +++N+++      G    
Sbjct: 245 KGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMD 304

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  L+  ML+ G   S  ++N +I    +KGLL +ALN+ E M   G  P   ++N LI 
Sbjct: 305 AMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQ 364

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           G C    +  A      M+ +   PDI++YN LL   C+ G + +A ++  +L S+   P
Sbjct: 365 GFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSP 424

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
           ++++YNT+IDGL + G  E+A +L E M  +G+ PD+IT T +V G  + G +  A +FF
Sbjct: 425 SLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFF 484

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           + + R  ++P+ F Y + I G  K   TS A     +M+AKG  P   TY  L+ G+   
Sbjct: 485 HYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYE 544

Query: 537 GSLEEANELLRKMVGDGFI 555
           G  E+A++L  ++   G +
Sbjct: 545 GLAEDASKLSNELYSRGLV 563



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 127/423 (30%), Positives = 208/423 (49%), Gaps = 3/423 (0%)

Query: 202 NGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQE 261
           +G + DV + N +I     +G   +  E  R++   G+ P+  TY+ +L S C  G++++
Sbjct: 143 SGAVIDVTSYNVLISGYCKSG---EIEEALRVLDRMGVSPNAATYDAVLCSLCDRGKLKQ 199

Query: 262 ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC 321
           A+++L       C P+ VT  VLI    +   + QA  L  +M   G K    +YN +I 
Sbjct: 200 AMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIK 259

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           G+ + G L EA+   +++ + G  P + ++N+++  LC  GR  DA      MLRK  +P
Sbjct: 260 GFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLP 319

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
            ++++N L+   C+ G +G+A  + + +      P   ++N LI G C    ++ A +  
Sbjct: 320 SVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYL 379

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
           E M+++G  PD++TY I++   CK G +  A    +++  KG  P   +Y T I G LK+
Sbjct: 380 EIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKV 439

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
           G    A  L EEM  KG  PDLIT   +V GL + G + EA +    +      P+   Y
Sbjct: 440 GKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIY 499

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
            SII    +        D   +M+ KG  PT  TYT LI      G  E A    +E+  
Sbjct: 500 NSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYS 559

Query: 622 KGI 624
           +G+
Sbjct: 560 RGL 562



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 141/517 (27%), Positives = 244/517 (47%), Gaps = 10/517 (1%)

Query: 75  NNRWVSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVF--CTILE 132
           + R+       V S P+ +   LN    + R   R  R  E + G +  E++       +
Sbjct: 54  SERFSKGALNGVESSPDRVNTSLNFEESEIRHLRRLIRNGELEEGSRFLEYMTNKGKSPD 113

Query: 133 ILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQC 192
           ++  + L+R    +  T     + GIL+        + + +   ++L+  Y K   +E+ 
Sbjct: 114 VIACTALIREFCKIGRTKNASQIMGILEES-----GAVIDVTSYNVLISGYCKSGEIEEA 168

Query: 193 LLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDS 252
           L V ++M   G+ P+    + ++  L D G   +A +V     +    P +VT   ++D+
Sbjct: 169 LRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDA 225

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
            CKE  + +A++L  EM+ +GC P+ VTYNVLI GF + G L++A   ++ +   G +  
Sbjct: 226 TCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPD 285

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
             S+N I+      G  ++A+ L   M+ +G  P++ T+NILI  LC+ G +  A +   
Sbjct: 286 VISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLE 345

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
            M +    P+  S+N L+ G+C    I  A    + + SR   P +VTYN L+  LC+ G
Sbjct: 346 MMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDG 405

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
            ++ A  +   + ++G  P +I+Y  +++G  K+G   +A E   EM  KGL+PD    T
Sbjct: 406 KVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCT 465

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
           + + G  + G   EA +    +      P+   YN ++ GLCK      A + L  MV  
Sbjct: 466 SVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAK 525

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           G  P   TYT++I      G       L N +  +GL
Sbjct: 526 GCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRGL 562



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/435 (26%), Positives = 207/435 (47%), Gaps = 3/435 (0%)

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           RNGELE+    +  M   G      +   +I  + + G    A  +   +   G    + 
Sbjct: 91  RNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVT 150

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           +YN+LI G CK G + +A  R  +  R  V P+  +Y+ +L   C  G + +A  +    
Sbjct: 151 SYNVLISGYCKSGEIEEAL-RVLD--RMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQ 207

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
                 P VVT   LID  C+   +  A +L   M N+G  PDV+TY +++ G CK G L
Sbjct: 208 LQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRL 267

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A  F  ++   G QPD  ++   +      G   +A +L   ML KG  P ++T+N+L
Sbjct: 268 DEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNIL 327

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           ++ LC+ G L +A  +L  M   G  P+  ++  +I        + R  +    M+ +G 
Sbjct: 328 INFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGC 387

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
            P +VTY +L+ A    G+++ A +  S++  KG  P++I+YN +I+GL ++ + + A  
Sbjct: 388 YPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVE 447

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQL 709
           L  +M  +G+ P+  T T ++      G  +EA++ +  +    I P+   +++++    
Sbjct: 448 LLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLC 507

Query: 710 DKDYKVHAVEYLESL 724
                  A+++L  +
Sbjct: 508 KSQQTSLAIDFLADM 522


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 155/527 (29%), Positives = 255/527 (48%), Gaps = 11/527 (2%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y +   +E    + N M      PD    N +I+ L   G    A  V+  M   G  PS
Sbjct: 229 YCRAGRIEDARRLINGM---PFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPS 285

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +VTY+ +LD+ CKE   ++A+ LL EM+ +GC P+ VTYNVLI      G++++A  ++ 
Sbjct: 286 VVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILS 345

Query: 303 DMLKLGLKVSAHSYNPII---CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
           ++   G K  A +Y P++   CG SE+   VE   L  EM +   AP   T+N ++  LC
Sbjct: 346 NLPSHGCKPDAVTYTPVLKSLCG-SERWKEVE--ELLAEMTSNNCAPDEVTFNTIVTSLC 402

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
           + G V  A      M     + DI++Y+++L G C  G + +A  L   L+S    P  +
Sbjct: 403 QQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTI 462

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
            Y T++ GLC     E A++L   M+     PD +T+  +V   C+ G +  A     +M
Sbjct: 463 AYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQM 522

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
              G  PD   Y   I G        +A  L  ++ + G  PD++T+N L+ GLC +   
Sbjct: 523 SENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRW 582

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           E+A +L+  M+     PD +T+ ++I +  + G L +  +    M   G  P   TY+++
Sbjct: 583 EDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIV 642

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           + A    G+ + A    S M   G  P++ITYN +I+ L +  ++++A  L   M   G+
Sbjct: 643 VDALLKAGKAQAALELLSGM-TNGT-PDLITYNTVISNLTKAGKMEEALDLLRVMVSNGL 700

Query: 660 LPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
            P+  TY  L    C       A+R+ + + D  + PD   ++ +LL
Sbjct: 701 CPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLL 747



 Score =  246 bits (627), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 154/571 (26%), Positives = 258/571 (45%), Gaps = 39/571 (6%)

Query: 185 KKSMVEQCLLVFNKMLRNGL--LPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           ++  +++ L++F+ M   G    P V  CN +IK L  +G   +  +  R+    G   +
Sbjct: 162 QRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDG---RVSDAERVFAALGPSAT 218

Query: 243 IVTYNTMLDSFCKEGEMQEA--------------------------------LELLWEMQ 270
           +VTYNTM++ +C+ G +++A                                L +  +M 
Sbjct: 219 VVTYNTMVNGYCRAGRIEDARRLINGMPFPPDTFTFNPLIRALCVRGRIPDALAVFDDML 278

Query: 271 GRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLV 330
            RGCSP+ VTY++L+    +     QA  L+ +M   G +    +YN +I     +G + 
Sbjct: 279 HRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVD 338

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
           EALN+   + + G  P   TY  ++  LC   R  +      EM   N  PD +++NT++
Sbjct: 339 EALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIV 398

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
              C+ G +  A  + D +     V  +VTY++++DGLC  G ++ A +L   + + G  
Sbjct: 399 TSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCK 458

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
           PD I YT ++ G C       A E   EML     PD   + T +A   + G    A R+
Sbjct: 459 PDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRV 518

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
            E+M   G  PD++TYN ++ GLC    +++A ELL  +   G  PD +T+ +++     
Sbjct: 519 VEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCG 578

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
           +        L  NM+R    P  +T+  +I +   +G L  A      M   G  PN  T
Sbjct: 579 VDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSST 638

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           Y+ +++ L +  +   A  L   M      P+  TY  +I+    AG  +EAL L + M+
Sbjct: 639 YSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTVISNLTKAGKMEEALDLLRVMV 696

Query: 691 DREIEPDYCTHSALLLKQLDKDYKVHAVEYL 721
              + PD  T+ +L      +D    AV  L
Sbjct: 697 SNGLCPDTTTYRSLAYGVCREDGTDRAVRML 727



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 157/567 (27%), Positives = 256/567 (45%), Gaps = 16/567 (2%)

Query: 123 DEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLI 182
           D F F  ++  L   G +  A  V +           D+L  G   S V+  IL   L  
Sbjct: 250 DTFTFNPLIRALCVRGRIPDALAVFD-----------DMLHRGCSPSVVTYSIL---LDA 295

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
             K+S   Q + + ++M   G  PD+   N +I  + + G   +A  +   +   G KP 
Sbjct: 296 TCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPD 355

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            VTY  +L S C     +E  ELL EM    C+P+ VT+N ++T   + G +++A  ++ 
Sbjct: 356 AVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVD 415

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M + G      +Y+ I+ G  + G + +A+ L   + + G  P    Y  ++ GLC   
Sbjct: 416 HMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTE 475

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           +   A     EML  +  PD +++NT++   C+ G +  A  + +++      P +VTYN
Sbjct: 476 QWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYN 535

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            +IDGLC    ++ A +L  ++ + G  PD++T+  ++ G C +     A +    M+R 
Sbjct: 536 CIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRS 595

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
              PD   + T I    + G  ++A    + M   G  P+  TY+++V  L K G  + A
Sbjct: 596 NCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAA 655

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            ELL  M      PD ITY ++I    + G +    DL   M+  GL P   TY  L + 
Sbjct: 656 LELLSGMTNG--TPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYG 713

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
                  + A      +Q  G+ P+   YN ++ G CR RR D A   F  M   G +P+
Sbjct: 714 VCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPD 773

Query: 663 KYTYTILINENCNAGNWQEALRLYKEM 689
           + TY IL+      G   EA RL   +
Sbjct: 774 ESTYVILLEALAYGGLLDEAKRLLASL 800



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 140/476 (29%), Positives = 222/476 (46%), Gaps = 10/476 (2%)

Query: 250 LDSFCKEGEMQEALELLWEMQ---GRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
           L S  + GE+ EAL L   M    GR C P  V  N+LI     +G +  A    R    
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPV-VPCNILIKRLCSDGRVSDAE---RVFAA 212

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
           LG   +  +YN ++ GY   G + +A  L   M      P   T+N LI  LC  GR+ D
Sbjct: 213 LGPSATVVTYNTMVNGYCRAGRIEDARRLINGM---PFPPDTFTFNPLIRALCVRGRIPD 269

Query: 367 ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
           A   F +ML +   P +++Y+ LL   C+     +A  L DE+R++   P +VTYN LI+
Sbjct: 270 ALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLIN 329

Query: 427 GLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
            +C  GD++ A  +  N+ + G  PD +TYT ++   C         E   EM      P
Sbjct: 330 AMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAP 389

Query: 487 DRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
           D   + T +    + G    A  + + M   G   D++TY+ ++ GLC +G +++A ELL
Sbjct: 390 DEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELL 449

Query: 547 RKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAAR 606
            ++   G  PD I YT+++          R  +L   ML     P  VT+  ++ +   +
Sbjct: 450 SRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQK 509

Query: 607 GRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
           G ++ A     +M   G  P+++TYN +I+GLC    ID A  L  D++  G  P+  T+
Sbjct: 510 GLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTF 569

Query: 667 TILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLE 722
             L+   C    W++A +L   M+     PD  T + ++     K     A+E L+
Sbjct: 570 NTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLK 625



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 135/487 (27%), Positives = 229/487 (47%), Gaps = 6/487 (1%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P +V  N ++   C +G + +A  +   +   G S   VTYN ++ G+ R G +E AR L
Sbjct: 185 PPVVPCNILIKRLCSDGRVSDAERVFAAL---GPSATVVTYNTMVNGYCRAGRIEDARRL 241

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           I  M          ++NP+I     +G + +AL + ++M+ RG +P++ TY+IL+   CK
Sbjct: 242 INGM---PFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCK 298

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
                 A     EM  K   PDI++YN L+   C  G++ EA  +   L S    P  VT
Sbjct: 299 ESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVT 358

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y  ++  LC     +  ++L   M +    PD +T+  +V   C+ G +  A E  + M 
Sbjct: 359 YTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMS 418

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
             G   D   Y++ + G   +G   +A  L   + + G  PD I Y  ++ GLC     E
Sbjct: 419 EHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWE 478

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
            A EL+ +M+     PD +T+ +++ +  + G + R   +   M   G SP +VTY  +I
Sbjct: 479 RAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCII 538

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                   ++ A    S++Q  G +P+++T+N L+ GLC + R + A  L  +M      
Sbjct: 539 DGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCP 598

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
           P++ T+  +I   C  G   +A+   K M +    P+  T+S ++   L       A+E 
Sbjct: 599 PDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALEL 658

Query: 721 LESLTLG 727
           L  +T G
Sbjct: 659 LSGMTNG 665



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 148/362 (40%), Gaps = 51/362 (14%)

Query: 123 DEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLI 182
           DE  F T++  L + GL+  A  VVE                                  
Sbjct: 495 DEVTFNTVVASLCQKGLVDRAIRVVE---------------------------------- 520

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
                          +M  NG  PD+   N II  L +      A E+   +   G KP 
Sbjct: 521 ---------------QMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPD 565

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           IVT+NT+L   C     ++A +L+  M    C P+ +T+N +IT   + G L QA   ++
Sbjct: 566 IVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLK 625

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M + G   ++ +Y+ ++    + G    AL L   M T G  P L TYN +I  L K G
Sbjct: 626 IMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGM-TNGT-PDLITYNTVISNLTKAG 683

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           ++ +A      M+   + PD  +Y +L YG CR      A  +   ++   L P    YN
Sbjct: 684 KMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYN 743

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            ++ G CR    ++A     +M++ G +PD  TY I++      G L  A+     +   
Sbjct: 744 DVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLCSL 803

Query: 483 GL 484
           G+
Sbjct: 804 GV 805


>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
 gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 148/505 (29%), Positives = 259/505 (51%), Gaps = 41/505 (8%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR---NGELEQA 297
           PS   ++  L ++  EG+   AL++  +M      PN +T N L+ G  R   +  +  A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR-GVAPTLATYNILIY 356
           R +  DM+K+G+ ++  ++N ++ GY  +G L +AL + E MV+   V P   TYN ++ 
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
            + K GR+SD +    +M +  ++P+ ++YN L+YGYC+ G++ EAF + + ++  N++P
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
            + TYN LI+GLC  G +    +L + M +  + PDV+TY  +++G  ++G    AR+  
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368

Query: 477 NEM----------------------------LRK--------GLQPDRFAYTTQIAGELK 500
            +M                             RK        G  PD   Y T I   LK
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLK 428

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
           +GD S A  +  EM  KG   + IT N ++  LCK   L+EA+ LL      GFI D +T
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVT 488

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           Y ++I        + +  ++++ M +  ++PT+ T+  LI      G+ ELA   F E+ 
Sbjct: 489 YGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELA 548

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
             G+ P+  T+N++I G C+  R+++A+  + +  +    P+ YT  IL+N  C  G  +
Sbjct: 549 ESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTE 608

Query: 681 EALRLYKEMLDREIEPDYCTHSALL 705
           +AL  +  +++ E E D  T++ ++
Sbjct: 609 KALNFFNTLIE-EREVDTVTYNTMI 632



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 165/544 (30%), Positives = 275/544 (50%), Gaps = 6/544 (1%)

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNR-IIKVLR-DNGFS 224
           LS   S  + D+ L  Y  +      L +F KM+R  L P++  CN  +I ++R  + FS
Sbjct: 125 LSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFS 184

Query: 225 V-KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR-GCSPNGVTYN 282
           +  AREV+  M + G+  ++ T+N +++ +C EG++++AL +L  M      +P+ VTYN
Sbjct: 185 ISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYN 244

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
            ++   S+ G L   + L+ DM K GL  +  +YN ++ GY + G L EA  + E M   
Sbjct: 245 TILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQT 304

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
            V P L TYNILI GLC  G + +       M    + PD+++YNTL+ G    G   EA
Sbjct: 305 NVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEA 364

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE-VAQQLKENMINQGILPDVITYTIMVN 461
             L +++ +  +    VT+N  +  LC+    E V +++KE +   G  PD++TY  ++ 
Sbjct: 365 RKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIK 424

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
              K+G+LS A E   EM +KG++ +     T +    K     EA+ L      +GF  
Sbjct: 425 AYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIV 484

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           D +TY  L+ G  +   +E+A E+  +M      P   T+ S+I      G      + F
Sbjct: 485 DEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKF 544

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
           + +   GL P   T+  +I  +   GR+E AF +++E      +P+  T N L+NGLC+ 
Sbjct: 545 DELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKE 604

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
              ++A   F  + EE  + +  TY  +I+  C     +EA  L  EM ++ +EPD  T+
Sbjct: 605 GMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTY 663

Query: 702 SALL 705
           ++ +
Sbjct: 664 NSFI 667



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 160/614 (26%), Positives = 293/614 (47%), Gaps = 48/614 (7%)

Query: 103 KPRIALRFFRW---VETQPGVKRDEFVFCTILEILIESGLLR--SAYWVVETVVCVNMHG 157
           KP +AL+ F+    ++ +P +     + C  L I    GL+R  S++ +       +   
Sbjct: 146 KPHVALQIFQKMIRLKLKPNL-----LTCNTLLI----GLVRYPSSFSIS------SARE 190

Query: 158 ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRN-GLLPDVKNCNRIIK 216
           + D ++  G+S  ++++  ++L+  Y  +  +E  L +  +M+    + PD    N I+K
Sbjct: 191 VFDDMVKIGVS--LNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248

Query: 217 VLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSP 276
            +   G     +E+   M + G+ P+ VTYN ++  +CK G ++EA +++  M+     P
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308

Query: 277 NGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLE 336
           +  TYN+LI G    G + +   L+  M  L L+    +YN +I G  E GL +EA  L 
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368

Query: 337 EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN-VIPDIISYNTLLYGYCR 395
           E+M   GV     T+NI +  LCK  +      +  E++  +   PDI++Y+TL+  Y +
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLK 428

Query: 396 SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
            G++  A  +  E+  + +    +T NT++D LC+   L+ A  L  +   +G + D +T
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVT 488

Query: 456 YTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML 515
           Y  ++ G  +   +  A E ++EM +  + P    + + I G    G T  A    +E+ 
Sbjct: 489 YGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELA 548

Query: 516 AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLR 575
             G  PD  T+N ++ G CK G +E+A E   + +   F PD+ T   +++   + G   
Sbjct: 549 ESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTE 608

Query: 576 RGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALI 635
           +  + FN ++ +    T VTY  +I A     +L+ A+   SEM+ KG+ P+  TYN+ I
Sbjct: 609 KALNFFNTLIEEREVDT-VTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFI 667

Query: 636 NGLCR----------LRRIDQAYG-----LFIDME--------EEGILPNKYTYTILINE 672
           + L            L++    +G     L ++ E        +E +      Y+ +I+E
Sbjct: 668 SLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDE 727

Query: 673 NCNAGNWQEALRLY 686
            C+ G  +E  R Y
Sbjct: 728 LCSRGRLKEHSRSY 741



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/208 (22%), Positives = 83/208 (39%), Gaps = 39/208 (18%)

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV-- 594
            SL   N LL   +     P    +   + A L  G       +F  M+R  L P L+  
Sbjct: 110 ASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTC 169

Query: 595 ------------------------------------TYTVLIHAHAARGRLELAFMYFSE 618
                                               T+ VL++ +   G+LE A      
Sbjct: 170 NTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLER 229

Query: 619 MQVK-GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
           M  +  + P+ +TYN ++  + +  R+     L +DM++ G++PN+ TY  L+   C  G
Sbjct: 230 MVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLG 289

Query: 678 NWQEALRLYKEMLDREIEPDYCTHSALL 705
           + +EA ++ + M    + PD CT++ L+
Sbjct: 290 SLKEAFQIVELMKQTNVLPDLCTYNILI 317


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 141/458 (30%), Positives = 230/458 (50%), Gaps = 9/458 (1%)

Query: 238 GIKPSIV-TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
           G++PS       ++   C  G   EA  +L       C P+ ++YN ++ G+   G+L+ 
Sbjct: 84  GLEPSAAGPCAALIKKLCASGRTAEARRVLAS-----CEPDVMSYNAMVAGYCVTGQLDN 138

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           AR L+  M    ++   ++YN +I G   +G    AL + ++M+ RG  P + TY IL+ 
Sbjct: 139 ARRLVAAM---PMEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLE 195

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
             CK      A     EM  K   PDI++YN ++ G C+ G + +A      L S    P
Sbjct: 196 ATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEP 255

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
             V+YN ++ GLC     E A++L   M  +G  P+V+T+ ++++  C+ G +  A E  
Sbjct: 256 NTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEIL 315

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           +++ + G  P+  +Y   +    K      A    E M++ G  PD+++YN L+  LC+ 
Sbjct: 316 DQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRG 375

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G ++ A ELL ++   G  P  I+Y ++I    + G      +L N M+ KGL P ++TY
Sbjct: 376 GEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITY 435

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
           + +       GR+E A   F ++Q  GIRPN + YNA++ GLC+ R    A  LF  M  
Sbjct: 436 STISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVS 495

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
            G +PN+ TYTILI      G  +EA  +  E+  R +
Sbjct: 496 NGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGV 533



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 124/421 (29%), Positives = 209/421 (49%), Gaps = 7/421 (1%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAR--EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEAL 263
           PDV + N ++      G+ V  +     R++    ++P   TYNT++   C  G    AL
Sbjct: 118 PDVMSYNAMVA-----GYCVTGQLDNARRLVAAMPMEPDTYTYNTLIRGLCGRGRTDNAL 172

Query: 264 ELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGY 323
            +L +M  RGC P+ VTY +L+    +    +QA  L+ +M   G      +YN ++ G 
Sbjct: 173 AVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGI 232

Query: 324 SEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
            ++G + +A+   + + + G  P   +YNI++ GLC   R  DA     EM RK   P++
Sbjct: 233 CQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNV 292

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
           +++N L+   CR G +  A  + D++      P  ++YN ++   C+   ++ A    E 
Sbjct: 293 VTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVEL 352

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           M++ G  PD+++Y  ++   C+ G +  A E  +++  KG  P   +Y T I G  K G 
Sbjct: 353 MVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGK 412

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
           T EA  L  EM+ KG  PD+ITY+ +  GLC+ G +EEA +   K+   G  P+ + Y +
Sbjct: 413 TEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNA 472

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           I+    +        DLF  M+  G  P   TYT+LI   A  G ++ A    +E+  +G
Sbjct: 473 ILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRG 532

Query: 624 I 624
           +
Sbjct: 533 V 533



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 129/437 (29%), Positives = 221/437 (50%), Gaps = 14/437 (3%)

Query: 275 SPNGVTY-----NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLL 329
           +PN V +     N  +    R G+LE+A  L+  M   GL+ SA       C    K L 
Sbjct: 48  APNAVPHRSAASNDRLRVLVRRGDLEEAIRLVESMA--GLEPSAAGP----CAALIKKLC 101

Query: 330 VEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTL 389
                 E   V     P + +YN ++ G C  G++ +AR     M  +   PD  +YNTL
Sbjct: 102 ASGRTAEARRVLASCEPDVMSYNAMVAGYCVTGQLDNARRLVAAMPME---PDTYTYNTL 158

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
           + G C  G    A  + D++  R  VP VVTY  L++  C+    + A +L + M ++G 
Sbjct: 159 IRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGC 218

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
            PD++TY ++VNG C+ G +  A EF   +   G +P+  +Y   + G        +A +
Sbjct: 219 APDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEK 278

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           L  EM  KG PP+++T+N+L+  LC+ G +E A E+L ++   G  P+ ++Y  I+HA  
Sbjct: 279 LMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFC 338

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
           +   + R       M+  G  P +V+Y  L+ A    G ++ A     +++ KG  P +I
Sbjct: 339 KQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLI 398

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           +YN +I+GL +  + ++A  L  +M  +G+ P+  TY+ + +  C  G  +EA++ + ++
Sbjct: 399 SYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKV 458

Query: 690 LDREIEPDYCTHSALLL 706
            D  I P+   ++A+LL
Sbjct: 459 QDMGIRPNTVLYNAILL 475



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 140/482 (29%), Positives = 227/482 (47%), Gaps = 11/482 (2%)

Query: 180 LLIYTKKSMVEQCLLVFNKMLRNGLLPDVKN-CNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L +  ++  +E+ + +   M   GL P     C  +IK L  +G + +AR V        
Sbjct: 63  LRVLVRRGDLEEAIRLVESMA--GLEPSAAGPCAALIKKLCASGRTAEARRVL-----AS 115

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
            +P +++YN M+  +C  G++  A  L+  M      P+  TYN LI G    G  + A 
Sbjct: 116 CEPDVMSYNAMVAGYCVTGQLDNARRLVAAMP---MEPDTYTYNTLIRGLCGRGRTDNAL 172

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            ++ DML+ G      +Y  ++    ++    +A+ L +EM  +G AP + TYN+++ G+
Sbjct: 173 AVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGI 232

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C+ GRV DA      +      P+ +SYN +L G C +    +A  L  E+  +   P V
Sbjct: 233 CQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNV 292

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           VT+N LI  LCR G +E A ++ + +   G  P+ ++Y  +++  CK   +  A  F   
Sbjct: 293 VTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVEL 352

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M+  G  PD  +Y T +    + G+   A  L  ++  KG  P LI+YN ++ GL K G 
Sbjct: 353 MVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGK 412

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
            EEA ELL +MV  G  PD ITY++I       G +      F  +   G+ P  V Y  
Sbjct: 413 TEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNA 472

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           ++     R     A   F+ M   G  PN  TY  LI GL     + +A  +  ++   G
Sbjct: 473 ILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRG 532

Query: 659 IL 660
           ++
Sbjct: 533 VV 534



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 201/408 (49%), Gaps = 15/408 (3%)

Query: 112 RWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCV 171
           R V   P ++ D + + T++  L   G   +A  V++           D+L  G +   V
Sbjct: 141 RLVAAMP-MEPDTYTYNTLIRGLCGRGRTDNALAVLD-----------DMLRRGCVPDVV 188

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           +  IL   L    K+S  +Q + + ++M   G  PD+   N ++  +   G    A E  
Sbjct: 189 TYTIL---LEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFL 245

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
           + +  +G +P+ V+YN +L   C     ++A +L+ EM  +G  PN VT+N+LI+   R 
Sbjct: 246 KSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRR 305

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G +E A  ++  + K G   ++ SYNPI+  + ++  +  A+   E MV+ G  P + +Y
Sbjct: 306 GLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSY 365

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           N L+  LC+ G V  A     ++  K   P +ISYNT++ G  ++G   EA  L +E+ +
Sbjct: 366 NTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVT 425

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           + L P ++TY+T+  GLCR G +E A +    + + GI P+ + Y  ++ G CK      
Sbjct: 426 KGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHS 485

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           A + F  M+  G  P+   YT  I G    G   EA  +  E+ ++G 
Sbjct: 486 AIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGV 533



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/300 (24%), Positives = 146/300 (48%), Gaps = 39/300 (13%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           ++   ++L+    ++ +VE  + + +++ + G  P+  + N I+          +A    
Sbjct: 291 NVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFV 350

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
            +M   G  P IV+YNT+L + C+ GE+  A+ELL +++ +GC+P  ++YN +I G ++ 
Sbjct: 351 ELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKA 410

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G+ E+A  L+ +M+  GL+                                   P + TY
Sbjct: 411 GKTEEALELLNEMVTKGLQ-----------------------------------PDIITY 435

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           + +  GLC+ GR+ +A   F ++    + P+ + YN +L G C+      A  LF  + S
Sbjct: 436 STISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVS 495

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
              +P   TY  LI+GL   G ++ A+++   + ++G    V++ T++  G+ ++ + +M
Sbjct: 496 NGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRG----VVSKTLVNKGAIRLLDGTM 551



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 67/154 (43%), Gaps = 11/154 (7%)

Query: 572 GDLRRGRDLFNNMLRKGLSPTLV-TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
           GDL     L  +M   GL P+       LI    A GR   A    +  +     P+V++
Sbjct: 70  GDLEEAIRLVESM--AGLEPSAAGPCAALIKKLCASGRTAEARRVLASCE-----PDVMS 122

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           YNA++ G C   ++D A  L   M  E   P+ YTY  LI   C  G    AL +  +ML
Sbjct: 123 YNAMVAGYCVTGQLDNARRLVAAMPME---PDTYTYNTLIRGLCGRGRTDNALAVLDDML 179

Query: 691 DREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
            R   PD  T++ LL     +     AV+ L+ +
Sbjct: 180 RRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEM 213


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 139/420 (33%), Positives = 222/420 (52%)

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA 332
           G  P+ +T    I GF   G++ QA      ++ +G  +   SY  +I G  + G    A
Sbjct: 258 GYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAA 317

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
           L L      + V P +  YN +I G+CK   V+DA   + E + K + PD+ +YN L+ G
Sbjct: 318 LELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISG 377

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
           +C  G + +A  LF+++ S+N++P V T++ L+DG C+ G+++ A+ +   M+ Q I PD
Sbjct: 378 FCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPD 437

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
           V+TY+ +++G C +  ++ A   FN M  +G+  +  +Y   I G  K+    EA +L +
Sbjct: 438 VVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFK 497

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           EM  K   PD+ITY+ L+ GLCK G +  A EL+ +M   G  PD ITY SI+ A  +  
Sbjct: 498 EMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKH 557

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
            + +   L   +  +G+ P + TYT+L+      G+LE A   F ++ VKG   +V  Y 
Sbjct: 558 HVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYT 617

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
            +I G C     D+A  L   MEE G +P+  TY I+I           A +L +EM+ R
Sbjct: 618 VMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMR 677



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 140/423 (33%), Positives = 225/423 (53%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G +P  +T  T +  FC +G++ +AL    ++   G   + V+Y  LI G  + GE + A
Sbjct: 258 GYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAA 317

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L+R      ++     YN II G  +   + +A +L  E V++ + P + TYN LI G
Sbjct: 318 LELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISG 377

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
            C  G++ DA   F +M  KN+IPD+ +++ L+ G+C+ GNI EA  +   +  +++ P 
Sbjct: 378 FCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPD 437

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           VVTY++L+DG C   ++  A+ +   M ++G+  +V +Y IM+NG CK+  +  A + F 
Sbjct: 438 VVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFK 497

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           EM  K + PD   Y++ I G  K G  S A  L +EM  +G  PD+ITYN ++  LCK  
Sbjct: 498 EMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKH 557

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            +++A  LL K+ G G  PD  TYT ++    + G L   R +F ++L KG +  +  YT
Sbjct: 558 HVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYT 617

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           V+I     +G  + A    S+M+  G  P+  TY  +I  L      D A  L  +M   
Sbjct: 618 VMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMR 677

Query: 658 GIL 660
           G+L
Sbjct: 678 GLL 680



 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 127/413 (30%), Positives = 229/413 (55%), Gaps = 8/413 (1%)

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           +LK G +    +    I G+  KG + +AL+  ++++  G      +Y  LI GLCK G 
Sbjct: 254 ILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGE 313

Query: 364 VSDARHRFFEMLRKN----VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
              A     E+LR+N    V PD++ YNT++ G C+  ++ +AF L+ E  S+ + P V 
Sbjct: 314 TKAA----LELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVF 369

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
           TYN LI G C  G L+ A  L   M ++ I+PDV T++I+V+G CK GN+  A+     M
Sbjct: 370 TYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMM 429

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
           +++ ++PD   Y++ + G   + + ++A  +   M  +G   ++ +YN++++G CK+  +
Sbjct: 430 MKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMV 489

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           +EA +L ++M      PD ITY+S+I    + G +    +L + M  +G  P ++TY  +
Sbjct: 490 DEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSI 549

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           + A   +  ++ A    ++++ +GIRP++ TY  L+ GLC+  +++ A  +F D+  +G 
Sbjct: 550 LDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGY 609

Query: 660 LPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
             + Y YT++I   C+ G + EAL L  +M +    PD  T+  ++L   +KD
Sbjct: 610 NLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKD 662



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 131/455 (28%), Positives = 234/455 (51%), Gaps = 9/455 (1%)

Query: 179 LLLIYTKKSMVEQCLL---------VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE 229
           +L+ Y K  + ++CLL            K+L+NG  PD       IK     G   +A  
Sbjct: 225 ILIEYHKTFIKQKCLLKSFEISIEYTPPKILKNGYEPDTITLTTFIKGFCLKGQIHQALH 284

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
            +  +   G     V+Y T+++  CK GE + ALELL    G+   P+ V YN +I G  
Sbjct: 285 FHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMC 344

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           ++  +  A  L  + +   +     +YN +I G+   G L +A++L  +M ++ + P + 
Sbjct: 345 KDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVY 404

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           T++IL+ G CK G + +A++    M+++++ PD+++Y++L+ GYC    + +A  +F+ +
Sbjct: 405 TFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTM 464

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
             R +   V +YN +I+G C+   ++ A +L + M ++ I PDVITY+ +++G CK G +
Sbjct: 465 SHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRI 524

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
           S A E  +EM  +G QPD   Y + +    K     +A  L  ++  +G  PD+ TY +L
Sbjct: 525 SYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTIL 584

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           V GLC+ G LE+A ++   ++  G+  D   YT +I    + G       L + M   G 
Sbjct: 585 VKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGC 644

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
            P   TY ++I +   +   ++A     EM ++G+
Sbjct: 645 IPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGL 679



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 117/350 (33%), Positives = 193/350 (55%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           PDV   N II  +  +     A ++Y       I P + TYN ++  FC  G++++A++L
Sbjct: 331 PDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDL 390

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
             +M  +   P+  T+++L+ GF ++G +++A+ ++  M+K  +K    +Y+ ++ GY  
Sbjct: 391 FNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCL 450

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
              + +A ++   M  RGV   + +YNI+I G CK   V +A   F EM  K + PD+I+
Sbjct: 451 VNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVIT 510

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           Y++L+ G C+SG I  A  L DE+  R   P ++TYN+++D LC+   ++ A  L   + 
Sbjct: 511 YSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLK 570

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
            QGI PD+ TYTI+V G C+ G L  AR+ F ++L KG   D +AYT  I G    G   
Sbjct: 571 GQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFD 630

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
           EA  L  +M   G  PD  TY +++  L +    + A +LLR+M+  G +
Sbjct: 631 EALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLL 680



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 139/540 (25%), Positives = 253/540 (46%), Gaps = 33/540 (6%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F ++LR    P      +I+  L  +        + + M   GIK + +  N +++SFC
Sbjct: 97  LFYRLLRQNPTPPDIEFGKILGSLVKSKHYHTVLSLSQKMEFKGIKLNFLNCNILINSFC 156

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTY-NVLITGFSRNGELEQ--------------ARG 299
           + G +  A  +L           GV +  +L   F R   LE                R 
Sbjct: 157 QLGLIPFAFSVL---------TRGVYWIEILKDCFDRKN-LEDFKRLCWIVLILWDFKRL 206

Query: 300 LIRDMLKLGLKVSAHSYNPII---CGYSEKGLLVEALNLEEE-----MVTRGVAPTLATY 351
            ++D L+  L    HS+  +I     + ++  L+++  +  E     ++  G  P   T 
Sbjct: 207 FLKDFLQSRLFNVLHSFKILIEYHKTFIKQKCLLKSFEISIEYTPPKILKNGYEPDTITL 266

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
              I G C  G++  A H   +++      D +SY TL+ G C+ G    A  L      
Sbjct: 267 TTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDG 326

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           + + P VV YNT+IDG+C+   +  A  L    +++ I PDV TY  +++G C +G L  
Sbjct: 327 KLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKD 386

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A + FN+M  K + PD + ++  + G  K G+  EA  +   M+ +   PD++TY+ L+ 
Sbjct: 387 AIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMD 446

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           G C +  + +A  +   M   G   +  +Y  +I+   ++  +     LF  M  K + P
Sbjct: 447 GYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFP 506

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
            ++TY+ LI      GR+  A     EM  +G +P++ITYN++++ LC+   +D+A  L 
Sbjct: 507 DVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLL 566

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDK 711
             ++ +GI P+  TYTIL+   C +G  ++A ++++++L +    D   ++ ++    DK
Sbjct: 567 TKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDK 626



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/356 (24%), Positives = 157/356 (44%), Gaps = 48/356 (13%)

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
           N  +A  LF  L  +N  P  + +  ++  L +         L + M  +GI  + +   
Sbjct: 90  NNNDAVSLFYRLLRQNPTPPDIEFGKILGSLVKSKHYHTVLSLSQKMEFKGIKLNFLNCN 149

Query: 458 IMVNGSCKMGNLSMARE------FFNEML-----RKGLQP-DRFAYTTQIAGELK----- 500
           I++N  C++G +  A        ++ E+L     RK L+   R  +   I  + K     
Sbjct: 150 ILINSFCQLGLIPFAFSVLTRGVYWIEILKDCFDRKNLEDFKRLCWIVLILWDFKRLFLK 209

Query: 501 ------LGDTSEAYRLQEE-------------------------MLAKGFPPDLITYNVL 529
                 L +   ++++  E                         +L  G+ PD IT    
Sbjct: 210 DFLQSRLFNVLHSFKILIEYHKTFIKQKCLLKSFEISIEYTPPKILKNGYEPDTITLTTF 269

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           + G C  G + +A     K++  GF  D ++Y ++I+   ++G+ +   +L      K +
Sbjct: 270 IKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLV 329

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
            P +V Y  +I        +  AF  +SE   K I P+V TYNALI+G C + ++  A  
Sbjct: 330 QPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAID 389

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           LF  M  + I+P+ YT++IL++  C  GN +EA  +   M+ + I+PD  T+S+L+
Sbjct: 390 LFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLM 445



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 69/138 (50%), Gaps = 4/138 (2%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           ILD L     KK  V++ + +  K+   G+ PD+     ++K L  +G    AR+V+  +
Sbjct: 549 ILDAL----CKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDL 604

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
              G    +  Y  M+  FC +G   EAL LL +M+  GC P+  TY ++I       E 
Sbjct: 605 LVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDEN 664

Query: 295 EQARGLIRDMLKLGLKVS 312
           + A  L+R+M+  GL V+
Sbjct: 665 DMAEKLLREMIMRGLLVA 682



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 75/165 (45%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   +   L + ++M   G  PD+   N I+  L       KA  +   +   GI+P + 
Sbjct: 520 KSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMN 579

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY  ++   C+ G++++A ++  ++  +G + +   Y V+I GF   G  ++A  L+  M
Sbjct: 580 TYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKM 639

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
            + G    A +Y  II    EK     A  L  EM+ RG+   L 
Sbjct: 640 EENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLLVALT 684


>gi|8778411|gb|AAF79419.1|AC025808_1 F18O14.1 [Arabidopsis thaliana]
          Length = 689

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 180/628 (28%), Positives = 304/628 (48%), Gaps = 65/628 (10%)

Query: 85  AVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAY 144
           A++ D E + RVL  + E+               GV R+   + ++++   + GL+  A 
Sbjct: 57  AMIGDVEGMTRVLRLMSER---------------GVSRNVVTYTSLIKGYCKKGLMEEAE 101

Query: 145 WVVET------VVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNK 198
            V E       V   +M+G   VL+ G                 Y +   +   + V + 
Sbjct: 102 HVFELLKEKKLVADQHMYG---VLMDG-----------------YCRTGQIRDAVRVHDN 141

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           M+  G+  +   CN +I     +G  V+A +++  M ++ +KP   TYNT++D +C+ G 
Sbjct: 142 MIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGY 201

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           + EAL+L  +M  +   P  +TYN+L+ G+SR G       L + MLK G+     S + 
Sbjct: 202 VDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCST 261

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           ++    + G   EA+ L E ++ RG+     T N++I GLCK  +V++A+     +    
Sbjct: 262 LLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFR 321

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
             P + +Y  L +GY + GN+ EAF + + +  + + PT+  YNTLI G  +Y  L    
Sbjct: 322 CKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVA 381

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
            L   +  +G+ P V TY  ++ G C +G +  A     EM+ KG+  +     ++IA  
Sbjct: 382 DLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLN-VNICSKIANS 440

Query: 499 L-KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE---LLRKMVGDG- 553
           L +L    EA  L ++         ++ +++L+ G   L    EA+    L  + + +  
Sbjct: 441 LFRLDKIDEACLLLQK---------IVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESV 491

Query: 554 --------FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG-LSPTLVTYTVLIHAHA 604
                    +P++I Y   I    + G L   R LF+++L      P   TYT+LIH  A
Sbjct: 492 ENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCA 551

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
             G +  AF    EM +KGI PN++TYNALI GLC+L  +D+A  L   + ++GI PN  
Sbjct: 552 IAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAI 611

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDR 692
           TY  LI+    +GN  EA+RL ++M+++
Sbjct: 612 TYNTLIDGLVKSGNVAEAMRLKEKMIEK 639



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 153/541 (28%), Positives = 259/541 (47%), Gaps = 42/541 (7%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMM-GEFGIKPSIVTYNTMLDSFCKEGEMQEALE 264
           PDV  C+ ++     +G   KA    +      G++ ++VTYN++++ +   G+++    
Sbjct: 8   PDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTR 67

Query: 265 LLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYS 324
           +L  M  RG S N VTY  LI G+ + G +E+A  +   + +  L    H Y  ++ GY 
Sbjct: 68  VLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYC 127

Query: 325 EKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDII 384
             G + +A+ + + M+  GV       N LI G CK G++ +A   F  M   ++ PD  
Sbjct: 128 RTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHH 187

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
           +YNTL+ GYCR+G + EA  L D++  + +VPTV+TYN L+ G  R G       L + M
Sbjct: 188 TYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMM 247

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
           + +G+  D I+ + ++    K+G+ + A + +  +L +GL  D       I+G  K+   
Sbjct: 248 LKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKV 307

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
           +EA  + + +      P + TY  L HG  K+G+L+EA  +   M   G  P    Y ++
Sbjct: 308 NEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTL 367

Query: 565 IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
           I  + +   L +  DL   +  +GL+PT+ TY  LI      G ++ A+    EM  KGI
Sbjct: 368 ISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGI 427

Query: 625 RPNVITYNALINGLCRLRRIDQAYGLF---IDME-------------------------- 655
             NV   + + N L RL +ID+A  L    +D +                          
Sbjct: 428 TLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKI 487

Query: 656 ---------EEGILPNKYTYTILINENCNAGNWQEALRLYKEML--DREIEPDYCTHSAL 704
                    ++ ++PN   Y + I   C AG  ++A +L+ ++L  DR I PD  T++ L
Sbjct: 488 AESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFI-PDEYTYTIL 546

Query: 705 L 705
           +
Sbjct: 547 I 547



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 136/456 (29%), Positives = 224/456 (49%), Gaps = 36/456 (7%)

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDM-LKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
           SP+  T ++++  + R+G +++A    ++    LGL+++  +YN +I GY+  G +    
Sbjct: 7   SPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMT 66

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
            +   M  RGV+  + TY  LI G CK G + +A H F  +  K ++ D   Y  L+ GY
Sbjct: 67  RVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGY 126

Query: 394 CRSGNIGEAFLLFDEL--------------------RSRNLV---------------PTV 418
           CR+G I +A  + D +                    +S  LV               P  
Sbjct: 127 CRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDH 186

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
            TYNTL+DG CR G ++ A +L + M  + ++P V+TY I++ G  ++G        +  
Sbjct: 187 HTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKM 246

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           ML++G+  D  + +T +    KLGD +EA +L E +LA+G   D IT NV++ GLCK+  
Sbjct: 247 MLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEK 306

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           + EA E+L  +      P   TY ++ H   ++G+L+    +   M RKG+ PT+  Y  
Sbjct: 307 VNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNT 366

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           LI        L        E++ +G+ P V TY ALI G C +  ID+AY    +M E+G
Sbjct: 367 LISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKG 426

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           I  N    + + N         EA  L ++++D ++
Sbjct: 427 ITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDL 462



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 130/475 (27%), Positives = 233/475 (49%), Gaps = 16/475 (3%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           ++LL  Y++       L ++  ML+ G+  D  +C+ +++ L   G   +A +++  +  
Sbjct: 225 NILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLA 284

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G+    +T N M+   CK  ++ EA E+L  +    C P   TY  L  G+ + G L++
Sbjct: 285 RGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKE 344

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  +   M + G+  +   YN +I G  +   L +  +L  E+  RG+ PT+ATY  LI 
Sbjct: 345 AFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALIT 404

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN-LV 415
           G C  G +  A    FEM+ K +  ++   + +     R   I EA LL  ++   + L+
Sbjct: 405 GWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLL 464

Query: 416 PTVVTYNTLIDGLCR--YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           P   +    ++          ++A+ ++ +   + ++P+ I Y + + G CK G L  AR
Sbjct: 465 PGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDAR 524

Query: 474 EFFNEMLRKG-LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
           + F+++L      PD + YT  I G    GD ++A+ L++EM  KG  P+++TYN L+ G
Sbjct: 525 KLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKG 584

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           LCKLG+++ A  LL K+   G  P+ ITY ++I   ++ G++     L   M+ KG    
Sbjct: 585 LCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKG---- 640

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
                 L+     +G +++      + +VK     VI  N+  N L  +RR+ +A
Sbjct: 641 ------LVRGSDKQGDVDIPKEVVLDPEVKLGSTGVIEMNS--NELYDVRRVSEA 687



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 164/336 (48%), Gaps = 9/336 (2%)

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR-NLVPTVVTYNTLIDGLCRYG 432
           M+   V PD+ + + ++  YCRSGN+ +A +   E  S   L   VVTYN+LI+G    G
Sbjct: 1   MISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIG 60

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
           D+E   ++   M  +G+  +V+TYT ++ G CK G +  A   F  +  K L  D+  Y 
Sbjct: 61  DVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYG 120

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
             + G  + G   +A R+ + M+  G   +    N L++G CK G L EA ++  +M   
Sbjct: 121 VLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDW 180

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
              PDH TY +++      G +     L + M +K + PT++TY +L+  ++  G     
Sbjct: 181 SLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDV 240

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
              +  M  +G+  + I+ + L+  L +L   ++A  L+ ++   G+L +  T  ++I+ 
Sbjct: 241 LSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISG 300

Query: 673 NCNAGNWQEALRLYKEMLDR----EIEPDYCTHSAL 704
            C      EA    KE+LD       +P   T+ AL
Sbjct: 301 LCKMEKVNEA----KEILDNVNIFRCKPAVQTYQAL 332



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 125/263 (47%), Gaps = 1/263 (0%)

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK-GLQPDRFAYTTQIAGELKLG 502
           MI+  + PDV T +I+VN  C+ GN+  A  F  E     GL+ +   Y + I G   +G
Sbjct: 1   MISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIG 60

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
           D     R+   M  +G   +++TY  L+ G CK G +EEA  +   +     + D   Y 
Sbjct: 61  DVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYG 120

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
            ++      G +R    + +NM+  G+         LI+ +   G+L  A   FS M   
Sbjct: 121 VLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDW 180

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
            ++P+  TYN L++G CR   +D+A  L   M ++ ++P   TY IL+      G + + 
Sbjct: 181 SLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDV 240

Query: 683 LRLYKEMLDREIEPDYCTHSALL 705
           L L+K ML R +  D  + S LL
Sbjct: 241 LSLWKMMLKRGVNADEISCSTLL 263


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 152/497 (30%), Positives = 248/497 (49%), Gaps = 2/497 (0%)

Query: 216 KVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCS 275
           K L  N         +RM+      P I  +  +L S  K       L L  +M   G  
Sbjct: 30  KSLHFNTLDDALSSFHRML-HMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIP 88

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           P+  T  ++I  F     ++ A  ++  +LKLG +    ++  ++ G    G + EAL++
Sbjct: 89  PDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDV 148

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
            ++MV  G  P + TY  L+ GLCK  ++++A + F EM+ K + PDI +YN+L++  C 
Sbjct: 149 FDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCN 208

Query: 396 SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
                    L +E+    ++P VV+ N ++D LC+ G +  A  + + MI  G+ PDV+T
Sbjct: 209 LCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVT 268

Query: 456 YTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML 515
           Y  +++G C    +  A + F+ M+R G   +  +Y T I G  K+    +A  L EEM 
Sbjct: 269 YAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMC 328

Query: 516 AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLR 575
            +   P+ +TY+ L+HGLC +G L++A  L  +MV  G IP+ +TY+ ++    +   L 
Sbjct: 329 RQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLA 388

Query: 576 RGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALI 635
               L   +    L P +  Y + I      G LE A   FS +  +G++P+V T+N +I
Sbjct: 389 EAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMI 448

Query: 636 NGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIE 695
            GLC+   +D+A  LF +M+E G L N  TY  +            A++L +EML R   
Sbjct: 449 RGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFS 508

Query: 696 PDYCTHSALLLKQLDKD 712
            D  T +ALL+K L  D
Sbjct: 509 ADVST-TALLVKMLSDD 524



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 145/502 (28%), Positives = 247/502 (49%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           ++  L  F++ML     P +    +++  +           + + M  FGI P + T   
Sbjct: 37  LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTI 96

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++SFC    +  AL +L ++   G  P+  T+  L+ G    G++ +A  +   M+  G
Sbjct: 97  VINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEG 156

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            + +  +Y  ++ G  +   L EALNL  EM+ +G++P + TYN LI+ LC         
Sbjct: 157 FQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVT 216

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               EM++  ++P+++S N ++   C+ G + EA  + D +    + P VVTY  L+DG 
Sbjct: 217 TLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGH 276

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C   +++ A ++ + M+  G + +V++Y  ++NG CK+  +  A   F EM R+ L P+ 
Sbjct: 277 CLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNT 336

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             Y+T I G   +G   +A  L  EM+A G  P+L+TY++L+  LCK   L EA  LL+ 
Sbjct: 337 MTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKA 396

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           + G    PD   Y   I      GDL   RDLF+N+  +GL P + T+ ++I     RG 
Sbjct: 397 IEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGL 456

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           L+ A   F EM   G   N  TYN +  GL +  +  +A  L  +M   G   +  T  +
Sbjct: 457 LDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTAL 516

Query: 669 LINENCNAGNWQEALRLYKEML 690
           L+    + G  Q   ++  E +
Sbjct: 517 LVKMLSDDGLDQSVKQILCEFM 538



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 126/362 (34%), Positives = 195/362 (53%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   + + L +F++M+  G+ PD+   N +I  L +         +   M +  I P++V
Sbjct: 173 KDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVV 232

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           + N ++D+ CKEG++ EA +++  M   G  P+ VTY  L+ G     E+++A  +   M
Sbjct: 233 SLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMM 292

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           ++ G   +  SYN +I GY +   + +A+ L EEM  + + P   TY+ LI+GLC  GR+
Sbjct: 293 VRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRL 352

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            DA   F EM+    IP++++Y+ LL   C++  + EA  L   +   NL P V  YN  
Sbjct: 353 QDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIA 412

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           IDG+CR GDLE A+ L  N+  +G+ PDV T+ IM+ G CK G L  A + F EM   G 
Sbjct: 413 IDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGC 472

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
             +   Y T   G L+   TS A +L EEMLA+GF  D+ T  +LV  L   G  +   +
Sbjct: 473 LRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDGLDQSVKQ 532

Query: 545 LL 546
           +L
Sbjct: 533 IL 534



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 126/258 (48%), Gaps = 5/258 (1%)

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
           S     L  A   F+ ML     P  F +   +    K+   S    L ++M + G PPD
Sbjct: 31  SLHFNTLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPD 90

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
           + T  ++++  C L  ++ A  +L K++  G  PD  T+T+++     +G +    D+F+
Sbjct: 91  VYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFD 150

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
            M+ +G  P +VTY  L++      +L  A   FSEM  KGI P++ TYN+LI+ LC L 
Sbjct: 151 KMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLC 210

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
                  L  +M +  I+PN  +  I+++  C  G   EA  +   M+   +EPD  T++
Sbjct: 211 EWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYA 270

Query: 703 AL-----LLKQLDKDYKV 715
           AL     L  ++D+  KV
Sbjct: 271 ALMDGHCLRSEMDEAVKV 288


>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
 gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 130/358 (36%), Positives = 207/358 (57%)

Query: 279 VTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
           VTYN LI  + R G LE+A  ++  M   GLK S  +YN II G  +KG    A  +  E
Sbjct: 2   VTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 61

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
           M+  G++P   TYN L+   C+    S+A+  F EMLR+ V+PD++S+++L+  + R+ +
Sbjct: 62  MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRH 121

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           + +A + F +++   LVP  V Y  L+ G CR G++  A ++++ M+ QG + DVI Y  
Sbjct: 122 LDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNT 181

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           ++NG CK   L+ A + F+EM+ +G  PD + +TT I G  + G+ ++A  L   M  + 
Sbjct: 182 ILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRN 241

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
             PD++ YN L+ G CK+G +E+A+EL   M+     P+HITY  +I+A   +G +    
Sbjct: 242 IKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAF 301

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
            L++ M+ KG+ PTLVT   +I  +   G    A  +   M  KG+ P+ I+YN LIN
Sbjct: 302 RLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 359



 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 127/353 (35%), Positives = 201/353 (56%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  Y ++ ++E+   + N M   GL P +   N II  L   G   +A+ +   M   G
Sbjct: 7   LIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIG 66

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           + P   TYNT+L   C+     EA E+  EM  +G  P+ V+++ L+  FSRN  L+QA 
Sbjct: 67  LSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQAL 126

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
              RDM K GL      Y  ++ GY   G ++EAL + +EM+ +G    +  YN ++ GL
Sbjct: 127 VYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGL 186

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           CK   ++DA   F EM+ +  +PD  ++ TL++G+C+ GN+ +A  LF  +  RN+ P +
Sbjct: 187 CKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDI 246

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           V YNTLIDG C+ G++E A +L + MI++ I P+ ITY I++N  C +G++S A   ++ 
Sbjct: 247 VAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDV 306

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           M+ KG++P      T I G  + GD+S+A      M+AKG  PD I+YN L++
Sbjct: 307 MIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 359



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 116/364 (31%), Positives = 206/364 (56%)

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +VTYNT++ ++C+EG ++EA E++  M  +G  P+  TYN +I G  + G   +A+G++ 
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +ML +GL     +YN ++     +    EA  +  EM+ +GV P L +++ L+    +  
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            +  A   F +M +  ++PD + Y  L++GYCR+GN+ EA  + DE+  +  V  V+ YN
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           T+++GLC+   L  A +L + M+ +G LPD  T+T +++G C+ GN++ A   F  M ++
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
            ++PD  AY T I G  K+G+  +A  L + M+++   P+ ITY +L++  C +G + EA
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEA 300

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             L   M+  G  P  +T  ++I      GD  +  +    M+ KG++P  ++Y  LI+ 
Sbjct: 301 FRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIND 360

Query: 603 HAAR 606
              R
Sbjct: 361 GKRR 364



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 110/323 (34%), Positives = 183/323 (56%)

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
           +++YNTL+  YCR G + EAF + + +  + L P++ TYN +I+GLC+ G    A+ +  
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            M+N G+ PD  TY  ++  SC+  N S A+E F EMLR+G+ PD  ++++ +A   +  
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
              +A     +M   G  PD + Y VL+HG C+ G++ EA ++  +M+  G + D I Y 
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
           +I++   +   L     LF+ M+ +G  P   T+T LIH H   G +  A   F  M  +
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
            I+P+++ YN LI+G C++  +++A  L+  M    I PN  TY ILIN  C+ G+  EA
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEA 300

Query: 683 LRLYKEMLDREIEPDYCTHSALL 705
            RL+  M+++ I+P   T + ++
Sbjct: 301 FRLWDVMIEKGIKPTLVTCNTVI 323



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 110/358 (30%), Positives = 192/358 (53%)

Query: 348 LATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFD 407
           + TYN LI   C+ G + +A      M  K + P + +YN ++ G C+ G    A  +  
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 408 ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG 467
           E+ +  L P   TYNTL+   CR  +   A+++   M+ QG++PD+++++ ++    +  
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
           +L  A  +F +M + GL PD   YT  + G  + G+  EA ++++EML +G   D+I YN
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
            +++GLCK   L +A++L  +MV  G +PD  T+T++IH   + G++ +   LF  M ++
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
            + P +V Y  LI      G +E A   +  M  + I PN ITY  LIN  C +  + +A
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEA 300

Query: 648 YGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           + L+  M E+GI P   T   +I   C +G+  +A      M+ + + PD+ +++ L+
Sbjct: 301 FRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLI 358



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 109/216 (50%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           I  +L+  Y +   + + L + ++ML  G + DV   N I+  L        A +++  M
Sbjct: 143 IYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEM 202

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
            E G  P   T+ T++   C++G M +AL L   M  R   P+ V YN LI GF + GE+
Sbjct: 203 VERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEM 262

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           E+A  L   M+   +  +  +Y  +I  Y   G + EA  L + M+ +G+ PTL T N +
Sbjct: 263 EKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTV 322

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
           I G C+ G  S A      M+ K V PD ISYNTL+
Sbjct: 323 IKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLI 358



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 51/92 (55%)

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYK 687
           ++TYN LI   CR   +++A+ +   M ++G+ P+ +TY  +IN  C  G +  A  +  
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 688 EMLDREIEPDYCTHSALLLKQLDKDYKVHAVE 719
           EML+  + PD  T++ LL++   +D    A E
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKE 92



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 57/108 (52%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K   +E+   +++ M+   + P+      +I      G   +A  ++ +M E GIKP+
Sbjct: 256 FCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPT 315

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
           +VT NT++  +C+ G+  +A E L  M  +G +P+ ++YN LI    R
Sbjct: 316 LVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINDGKR 363



 Score = 39.7 bits (91), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 38/75 (50%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +L+  Y     V +   +++ M+  G+ P +  CN +IK    +G S KA E    M   
Sbjct: 286 ILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAK 345

Query: 238 GIKPSIVTYNTMLDS 252
           G+ P  ++YNT+++ 
Sbjct: 346 GVAPDHISYNTLIND 360


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 144/459 (31%), Positives = 233/459 (50%), Gaps = 3/459 (0%)

Query: 247 NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
           N  L    + GE++E L+ L  M  +G  P+ +    LI GF R+G+  +A  ++  +  
Sbjct: 111 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILEN 170

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
            G      +YN +I GY + G + +AL + E M    VAP + TYN ++  LC  G++ +
Sbjct: 171 SGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKE 227

Query: 367 ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
           A       +++   PD+I+Y  L+   C    +G+A  L DE+R +   P VVTYN LI+
Sbjct: 228 AMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 287

Query: 427 GLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
           G+C+ G L+ A +   NM   G  P+VIT+ I++   C  G    A     +MLRKG  P
Sbjct: 288 GICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSP 347

Query: 487 DRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
               +   I    +      A  + E+M   G  P+ ++YN L+HG C+   ++ A E L
Sbjct: 348 SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYL 407

Query: 547 RKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAAR 606
             MV  G  PD +TY +++ A  + G      ++ N +  KG SP L+TY  +I      
Sbjct: 408 EIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKV 467

Query: 607 GRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
           G+ E A     EM+ KG++P++ITY+ L+ GL    ++D+A  +F DME   I P+  TY
Sbjct: 468 GKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTY 527

Query: 667 TILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             ++   C A     A+     M+++  +P   T++ L+
Sbjct: 528 NAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILI 566



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 138/475 (29%), Positives = 243/475 (51%), Gaps = 22/475 (4%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
             K++RNG L              + G     R +Y+     G  P ++   +++  FC+
Sbjct: 114 LRKLVRNGEL--------------EEGLKFLERMIYQ-----GDIPDVIACTSLIRGFCR 154

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
            G+ ++A  ++  ++  G  P+ +TYNVLI G+ ++GE+++A   ++ + ++ +     +
Sbjct: 155 SGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKA---LQVLERMSVAPDVVT 211

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           YN I+    + G L EA+ + +  + R   P + TY ILI   C    V  A     EM 
Sbjct: 212 YNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMR 271

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
           +K   PD+++YN L+ G C+ G + EA    + +      P V+T+N ++  +C  G   
Sbjct: 272 KKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWM 331

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            A++L  +M+ +G  P V+T+ I++N  C+   L  A +   +M + G  P+  +Y   +
Sbjct: 332 DAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLL 391

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
            G  +      A    E M+++G  PD++TYN L+  LCK G  + A E+L ++   G  
Sbjct: 392 HGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCS 451

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           P  ITY ++I    ++G      +L   M RKGL P ++TY+ L+      G+++ A   
Sbjct: 452 PVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKI 511

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
           F +M+   I+P+ +TYNA++ GLC+ ++  +A      M E+G  P K TYTILI
Sbjct: 512 FHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILI 566



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 136/403 (33%), Positives = 208/403 (51%), Gaps = 3/403 (0%)

Query: 202 NGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQE 261
           +G +PDV   N +I     +G   KA +V   M    + P +VTYNT+L S C  G+++E
Sbjct: 171 SGAVPDVITYNVLIGGYCKSGEIDKALQVLERMS---VAPDVVTYNTILRSLCDSGKLKE 227

Query: 262 ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC 321
           A+E+L     R C P+ +TY +LI     +  + QA  L+ +M K G K    +YN +I 
Sbjct: 228 AMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 287

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           G  ++G L EA+     M   G  P + T+NI++  +C  GR  DA     +MLRK   P
Sbjct: 288 GICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSP 347

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
            ++++N L+   CR   +G A  + +++     +P  ++YN L+ G C+   ++ A +  
Sbjct: 348 SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYL 407

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
           E M+++G  PD++TY  ++   CK G    A E  N++  KG  P    Y T I G  K+
Sbjct: 408 EIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKV 467

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
           G T  A  L EEM  KG  PD+ITY+ L+ GL   G ++EA ++   M G    P  +TY
Sbjct: 468 GKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTY 527

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
            +I+    +     R  D    M+ KG  PT  TYT+LI   A
Sbjct: 528 NAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGIA 570



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 138/456 (30%), Positives = 228/456 (50%), Gaps = 12/456 (2%)

Query: 275 SPNGV---------TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           SPNGV           N+ +    RNGELE+    +  M+  G      +   +I G+  
Sbjct: 95  SPNGVNGSRSFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCR 154

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
            G   +A  + E +   G  P + TYN+LI G CK G +  A      M   +V PD+++
Sbjct: 155 SGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVT 211

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           YNT+L   C SG + EA  + D    R   P V+TY  LI+  C    +  A +L + M 
Sbjct: 212 YNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMR 271

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
            +G  PDV+TY +++NG CK G L  A +F N M   G QP+   +   +      G   
Sbjct: 272 KKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWM 331

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           +A RL  +ML KG  P ++T+N+L++ LC+   L  A ++L KM   G +P+ ++Y  ++
Sbjct: 332 DAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLL 391

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
           H   +   + R  +    M+ +G  P +VTY  L+ A    G+ + A    +++  KG  
Sbjct: 392 HGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCS 451

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           P +ITYN +I+GL ++ + + A  L  +M  +G+ P+  TY+ L+      G   EA+++
Sbjct: 452 PVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKI 511

Query: 686 YKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYL 721
           + +M    I+P   T++A++L          A+++L
Sbjct: 512 FHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFL 547



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 134/445 (30%), Positives = 227/445 (51%), Gaps = 18/445 (4%)

Query: 124 EFVFCT-ILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLI 182
           + + CT ++     SG  R A  ++E  +  N   + DV+              ++L+  
Sbjct: 141 DVIACTSLIRGFCRSGKTRKATRIME--ILENSGAVPDVIT------------YNVLIGG 186

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K   +++ L V  +M    + PDV   N I++ L D+G   +A EV     +    P 
Sbjct: 187 YCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPD 243

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           ++TY  ++++ C +  + +A++LL EM+ +GC P+ VTYNVLI G  + G L++A   + 
Sbjct: 244 VITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLN 303

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M   G + +  ++N I+      G  ++A  L  +M+ +G +P++ T+NILI  LC+  
Sbjct: 304 NMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKR 363

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            +  A     +M +   +P+ +SYN LL+G+C+   +  A    + + SR   P +VTYN
Sbjct: 364 LLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYN 423

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           TL+  LC+ G  + A ++   + ++G  P +ITY  +++G  K+G    A E   EM RK
Sbjct: 424 TLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRK 483

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           GL+PD   Y+T + G    G   EA ++  +M      P  +TYN ++ GLCK      A
Sbjct: 484 GLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRA 543

Query: 543 NELLRKMVGDGFIPDHITYTSIIHA 567
            + L  MV  G  P   TYT +I  
Sbjct: 544 IDFLAYMVEKGCKPTKATYTILIEG 568



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 107/345 (31%), Positives = 181/345 (52%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +++ + V ++ ++    PDV     +I+   ++    +A ++   M + G KP +VTYN 
Sbjct: 225 LKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 284

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++  CKEG + EA++ L  M   GC PN +T+N+++      G    A  L+ DML+ G
Sbjct: 285 LINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKG 344

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
              S  ++N +I     K LL  A+++ E+M   G  P   +YN L++G C+  ++  A 
Sbjct: 345 CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAI 404

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
                M+ +   PDI++YNTLL   C+ G    A  + ++L S+   P ++TYNT+IDGL
Sbjct: 405 EYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGL 464

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
            + G  E A +L E M  +G+ PD+ITY+ ++ G    G +  A + F++M    ++P  
Sbjct: 465 TKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSA 524

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
             Y   + G  K   TS A      M+ KG  P   TY +L+ G+
Sbjct: 525 VTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGI 569


>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
          Length = 735

 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 152/518 (29%), Positives = 264/518 (50%), Gaps = 12/518 (2%)

Query: 188 MVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
           MV + + VF  M  +   PD      ++  L + G + +A  +       G +P+IV YN
Sbjct: 157 MVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYN 216

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
            ++D +C  GEM+ AL++   M G  CSPN  TY  LI G  ++G++E+A  L   M++ 
Sbjct: 217 ALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEA 276

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           GL+ +  +Y  +I G   +G L  A  L   M T G+ P   T+++LI  LCK  +V +A
Sbjct: 277 GLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEA 336

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
           +     +++K V  + + Y +L+ G C++G I  A  L  ++ S   VP   +Y++LIDG
Sbjct: 337 QLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDG 396

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           LCR   L  A  + E+M+ +GI    +TYTI+++   +       ++ F++M+  G+ PD
Sbjct: 397 LCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPD 456

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              YT  +    + G   +A  +  +M+ +G  P+L+TYN L+ G   LG + +A     
Sbjct: 457 IVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFE 516

Query: 548 KMVGDGFIPDHITYTSIIHASL------------EMGDLRRGRDLFNNMLRKGLSPTLVT 595
            MVG G+ P+  +YT ++   +            ++ D++  + L  ++  + L      
Sbjct: 517 VMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADI 576

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           Y+  I       RLE A  +F  MQ   + P+   Y ++I+  CRL+ +  A  L   M 
Sbjct: 577 YSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMT 636

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
           + G LP+  +Y I+I+  C  GN++ A  ++ ++L +E
Sbjct: 637 KSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKE 674



 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 136/475 (28%), Positives = 235/475 (49%)

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY T+++++C  G++  A + L  +   G +P+   Y   + G+ R G L  A  +   M
Sbjct: 74  TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
              G   +A +Y  ++ G    G++ EA+ +   M     AP    Y  +++GLC+ GR 
Sbjct: 134 PLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRT 193

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            +A     E +     P+I+ YN L+ GYC +G +  A  +F+ +      P V TY  L
Sbjct: 194 EEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTEL 253

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           I GLC+ G +E A  L   M+  G+ P+V+TYT ++ G C  G+L  A    + M   GL
Sbjct: 254 IHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGL 313

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            P+ + ++  I    K     EA      ++ KG   + + Y  L+ GLCK G ++ A+E
Sbjct: 314 VPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADE 373

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           L++KM+ +GF+PD  +Y+S+I        L +   +  +M+ KG+  + VTYT++I    
Sbjct: 374 LMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELV 433

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
                E     F +M   GI P+++TY   +   C   R++ A  + + M + G+ PN  
Sbjct: 434 REVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLV 493

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVE 719
           TY  LI    N G   +A   ++ M+ +  +P+  +++ LL   + K    ++V+
Sbjct: 494 TYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVD 548



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 135/433 (31%), Positives = 218/433 (50%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G+ P    Y + +  +C+ G +  A  +   M  RGC     TY  L+ G    G + +A
Sbjct: 102 GLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREA 161

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             +   M         H Y  ++ G  E G   EA  L EE ++ G  P +  YN LI G
Sbjct: 162 MAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDG 221

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
            C  G +  A   F  M      P++ +Y  L++G C+SG +  A +LF  +    L P 
Sbjct: 222 YCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPN 281

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           VVTY  LI G C  G L+ A +L   M   G++P+  T++++++  CK   +  A+ F  
Sbjct: 282 VVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLG 341

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            +++KG++ +   YT+ I G  K G    A  L ++M+++GF PD  +Y+ L+ GLC+  
Sbjct: 342 SLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQK 401

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            L +A  +L  M+  G     +TYT II   +        + +F+ M+  G++P +VTYT
Sbjct: 402 KLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYT 461

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           V + ++   GR+E A     +M  +G+ PN++TYN LI G   L  + QA+  F  M  +
Sbjct: 462 VFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGK 521

Query: 658 GILPNKYTYTILI 670
           G  PN+ +YT+L+
Sbjct: 522 GWKPNEDSYTVLL 534



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 145/541 (26%), Positives = 242/541 (44%), Gaps = 47/541 (8%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
              +L  GL PD       +      G    A  V+ +M   G   +  TY  +L     
Sbjct: 95  LTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLG 154

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
            G ++EA+ +   M+   C+P+   Y  ++ G    G  E+A  L+ + +  G + +   
Sbjct: 155 AGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVV 214

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           YN +I GY   G +  AL + E M     +P + TY  LI+GLCK G+V  A   F  M+
Sbjct: 215 YNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMV 274

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
              + P++++Y  L+ G C  G++  AF L   + +  LVP   T++ LID LC+   +E
Sbjct: 275 EAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVE 334

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            AQ    +++ +G+  + + YT +++G CK G +  A E   +M+ +G  PD  +Y++ I
Sbjct: 335 EAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLI 394

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
            G  +    S+A  + E+M+ KG     +TY +++  L +    E   ++  KM+  G  
Sbjct: 395 DGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGIN 454

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           PD +TYT  + +  E G +     +   M+ +G+ P LVTY  LI  +A  G +  AF  
Sbjct: 455 PDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFST 514

Query: 616 FSEMQVKGIRPNVITYNAL----------------------------------------- 634
           F  M  KG +PN  +Y  L                                         
Sbjct: 515 FEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAA 574

Query: 635 ------INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
                 I  LCR+ R+++A   F+ M+   + P++  YT +I+  C      +AL L   
Sbjct: 575 DIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDS 634

Query: 689 M 689
           M
Sbjct: 635 M 635



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 150/601 (24%), Positives = 266/601 (44%), Gaps = 37/601 (6%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVV----------ETVVCVNM-HGILDV------ 161
           G  R  F +  +L  L+ +G++R A  V           +T V   M HG+ +       
Sbjct: 137 GCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEA 196

Query: 162 ------LIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRII 215
                  +  G     +I + + L+  Y     +E  L VF  M  N   P+V+    +I
Sbjct: 197 EVLLEEAMSNGFEP--NIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELI 254

Query: 216 KVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCS 275
             L  +G   +A  ++  M E G++P++VTY  ++   C EG +Q A  LL  M+  G  
Sbjct: 255 HGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLV 314

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           PN  T++VLI    +  ++E+A+  +  ++K G+KV+   Y  +I G  + G +  A  L
Sbjct: 315 PNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADEL 374

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
            ++M++ G  P   +Y+ LI GLC+  ++S A     +M+ K +    ++Y  ++    R
Sbjct: 375 MQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVR 434

Query: 396 SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
                    +FD++ +  + P +VTY   +   C  G +E A+ +   M+++G+ P+++T
Sbjct: 435 EVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVT 494

Query: 456 YTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI------------AGELKLGD 503
           Y  ++ G   +G +S A   F  M+ KG +P+  +YT  +                K+ D
Sbjct: 495 YNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIAD 554

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
             +   L E++  +  P     Y+  +  LC++  LEEA      M      P    YTS
Sbjct: 555 MKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTS 614

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           II     +  L     L ++M + G  P L +Y ++I +    G    A   F ++ +K 
Sbjct: 615 IIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKE 674

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
              + I +  LI GL +   + +   L   M+E G  P+     ++  E       QE  
Sbjct: 675 SNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPSNTINAMITGEITVTNEVQEIA 734

Query: 684 R 684
           R
Sbjct: 735 R 735



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 146/311 (46%), Gaps = 6/311 (1%)

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
           +P +   NTL+  L R+      + L   M  +    ++ TYT ++N  C  G++  A++
Sbjct: 38  LPPLRCLNTLLMALARHRMFPDMESLASRMPAR----NLRTYTTLINAYCLAGDIPAAKQ 93

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
               +L  GL PD +AYT+ + G  + G  + A R+   M  +G      TY  L+HGL 
Sbjct: 94  HLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLL 153

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
             G + EA  +   M  D   PD   Y +++H   E G       L    +  G  P +V
Sbjct: 154 GAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIV 213

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
            Y  LI  +   G +E A   F  M      PNV TY  LI+GLC+  ++++A  LF  M
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRM 273

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYK 714
            E G+ PN  TYT LI   CN G+ Q A RL   M    + P+  T S +L+  L K  K
Sbjct: 274 VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFS-VLIDALCKREK 332

Query: 715 VHAVE-YLESL 724
           V   + +L SL
Sbjct: 333 VEEAQLFLGSL 343


>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
 gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
 gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 156/509 (30%), Positives = 258/509 (50%), Gaps = 5/509 (0%)

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
           +R  GF   A  V  +M + G   ++  +N +L   C+  E  +A+ LL EM+     P+
Sbjct: 120 MRKTGF---AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPD 176

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
             +YN +I GF    ELE+A  L  +M   G   S  ++  +I  + + G + EA+   +
Sbjct: 177 VFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLK 236

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
           EM   G+   L  Y  LI G C  G +   +  F E+L +   P  I+YNTL+ G+C+ G
Sbjct: 237 EMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLG 296

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
            + EA  +F+ +  R + P V TY  LIDGLC  G  + A QL   MI +   P+ +TY 
Sbjct: 297 QLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYN 356

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
           I++N  CK G ++ A E    M ++  +PD   Y   + G    GD  EA +L   ML  
Sbjct: 357 IIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKD 416

Query: 518 G--FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLR 575
                PD+I+YN L+HGLCK   L +A ++   +V      D +T   +++++L+ GD+ 
Sbjct: 417 SSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVN 476

Query: 576 RGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALI 635
           +  +L+  +    +     TYT +I      G L +A     +M+V  ++P+V  YN L+
Sbjct: 477 KAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLL 536

Query: 636 NGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIE 695
           + LC+   +DQA+ LF +M+ +   P+  ++ I+I+ +  AG+ + A  L   M    + 
Sbjct: 537 SSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLS 596

Query: 696 PDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           PD  T+S L+ + L   Y   A+ + + +
Sbjct: 597 PDLFTYSKLINRFLKLGYLDEAISFFDKM 625



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 153/505 (30%), Positives = 253/505 (50%), Gaps = 2/505 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +  +M RN L+PDV + N +I+   +     KA E+   M   G   S+VT+  ++D+FC
Sbjct: 164 LLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFC 223

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K G+M EA+  L EM+  G   + V Y  LI GF   GEL++ + L  ++L+ G    A 
Sbjct: 224 KAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAI 283

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +YN +I G+ + G L EA  + E M+ RGV P + TY  LI GLC  G+  +A      M
Sbjct: 284 TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLM 343

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           + K+  P+ ++YN ++   C+ G + +A  + + ++ R   P  +TYN L+ GLC  GDL
Sbjct: 344 IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDL 403

Query: 435 EVAQQLKENMINQGIL--PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
           + A +L   M+       PDVI+Y  +++G CK   L  A + ++ ++ K    DR    
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTN 463

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
             +   LK GD ++A  L +++       +  TY  ++ G CK G L  A  LL KM   
Sbjct: 464 ILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVS 523

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
              P    Y  ++ +  + G L +   LF  M R    P +V++ ++I      G ++ A
Sbjct: 524 ELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSA 583

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
                 M   G+ P++ TY+ LIN   +L  +D+A   F  M + G  P+ +    ++  
Sbjct: 584 ESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKY 643

Query: 673 NCNAGNWQEALRLYKEMLDREIEPD 697
             + G   +   L K+++D++I  D
Sbjct: 644 CISQGETDKLTELVKKLVDKDIVLD 668



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 129/416 (31%), Positives = 217/416 (52%), Gaps = 2/416 (0%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +L+  + K   +++ +    +M   GL  D+     +I+   D G   + + ++  + E 
Sbjct: 217 ILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLER 276

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G  P  +TYNT++  FCK G+++EA E+   M  RG  PN  TY  LI G    G+ ++A
Sbjct: 277 GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEA 336

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L+  M++   + +A +YN II    + GL+ +A+ + E M  R   P   TYNIL+ G
Sbjct: 337 LQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGG 396

Query: 358 LCKWGRVSDARHRFFEMLRKN--VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
           LC  G + +A    + ML+ +    PD+ISYN L++G C+   + +A  ++D L  +   
Sbjct: 397 LCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGA 456

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
              VT N L++   + GD+  A +L + + +  I+ +  TYT M++G CK G L++A+  
Sbjct: 457 GDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGL 516

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
             +M    LQP  F Y   ++   K G   +A+RL EEM      PD++++N+++ G  K
Sbjct: 517 LCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLK 576

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
            G ++ A  LL  M   G  PD  TY+ +I+  L++G L      F+ M+  G  P
Sbjct: 577 AGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEP 632



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 129/421 (30%), Positives = 207/421 (49%), Gaps = 3/421 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F+++L  G  P     N +I+     G   +A E++  M E G++P++ TY  ++D  C
Sbjct: 269 LFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLC 328

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
             G+ +EAL+LL  M  +   PN VTYN++I    ++G +  A  ++  M K   +    
Sbjct: 329 GVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNI 388

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRG--VAPTLATYNILIYGLCKWGRVSDARHRFF 372
           +YN ++ G   KG L EA  L   M+       P + +YN LI+GLCK  R+  A   + 
Sbjct: 389 TYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYD 448

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
            ++ K    D ++ N LL    ++G++ +A  L+ ++    +V    TY  +IDG C+ G
Sbjct: 449 LLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTG 508

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
            L VA+ L   M    + P V  Y  +++  CK G+L  A   F EM R    PD  ++ 
Sbjct: 509 MLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFN 568

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
             I G LK GD   A  L   M   G  PDL TY+ L++   KLG L+EA     KMV  
Sbjct: 569 IMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDS 628

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS-PTLVTYTVLIHAHAARGRLEL 611
           GF PD     S++   +  G+  +  +L   ++ K +     +T TV+ +   +   ++L
Sbjct: 629 GFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDL 688

Query: 612 A 612
           A
Sbjct: 689 A 689



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 105/252 (41%), Gaps = 36/252 (14%)

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           KA E+++ + +  I  +  TY  M+D FCK G +  A  LL +M+     P+   YN L+
Sbjct: 477 KAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLL 536

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
           +   + G L+QA  L                                    EEM      
Sbjct: 537 SSLCKEGSLDQAWRLF-----------------------------------EEMQRDNNF 561

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P + ++NI+I G  K G +  A      M R  + PD+ +Y+ L+  + + G + EA   
Sbjct: 562 PDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISF 621

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV-ITYTIMVNGSC 464
           FD++      P     ++++      G+ +   +L + ++++ I+ D  +T T+M     
Sbjct: 622 FDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCN 681

Query: 465 KMGNLSMAREFF 476
              N+ +A+   
Sbjct: 682 SSANMDLAKRLL 693



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 65/138 (47%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K  M+     +  KM  + L P V + N ++  L   G   +A  ++  M      P 
Sbjct: 504 FCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPD 563

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +V++N M+D   K G+++ A  LL  M   G SP+  TY+ LI  F + G L++A     
Sbjct: 564 VVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFD 623

Query: 303 DMLKLGLKVSAHSYNPII 320
            M+  G +  AH  + ++
Sbjct: 624 KMVDSGFEPDAHICDSVL 641



 Score = 43.9 bits (102), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 58/127 (45%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL    K+  ++Q   +F +M R+   PDV + N +I      G    A  +   M   G
Sbjct: 535 LLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAG 594

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           + P + TY+ +++ F K G + EA+    +M   G  P+    + ++      GE ++  
Sbjct: 595 LSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLT 654

Query: 299 GLIRDML 305
            L++ ++
Sbjct: 655 ELVKKLV 661


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 136/441 (30%), Positives = 236/441 (53%), Gaps = 2/441 (0%)

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
           +I  L   G  ++A  + +     G    I TY T++D   K  ++QEA+ L+ ++   G
Sbjct: 5   LINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANG 64

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
           C+P   TYN L+ G  + G LE+A  L+R ++  G      +Y  +I G  +K    EA 
Sbjct: 65  CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAY 124

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
            L +EM +RG+A     Y  LI GL + G++  A   +  M  +  +PD+++ +T++ G 
Sbjct: 125 KLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGL 184

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
           C++G IG A  +F  + +R L P  V Y+ LI GLC+   ++ A ++   M      PD 
Sbjct: 185 CKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDT 244

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
           ITY I+++G CK G+++ AR FF+EML  G +PD + Y   I+G  K G+T  A  + ++
Sbjct: 245 ITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDD 304

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           M +    P+++TY  L+ GLCK   L +A+   + M   G  PD   Y+S++    + G 
Sbjct: 305 MSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGK 364

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
           L  G  LF+ M R G++ +     ++ H   A  R++ A   F+ ++ +G+ P+   YN+
Sbjct: 365 LEGGCMLFDEMERSGVANSQTRTRLIFHLCKAN-RVDEAVSLFNAIRKEGM-PHPYAYNS 422

Query: 634 LINGLCRLRRIDQAYGLFIDM 654
           +I+ L +  ++++   ++ +M
Sbjct: 423 IISALIKSGKVNEGQAVYQEM 443



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 140/437 (32%), Positives = 222/437 (50%), Gaps = 3/437 (0%)

Query: 280 TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
           T+++LI G  + G L QA  L ++    G  +  H+Y  I+   ++   + EA+ L E++
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
              G  PT+ATYN L+ GLCK GR+ +A     +++     PD+++Y +L+ G  +    
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
            EA+ LF E+ SR L    V Y  LI GL + G +  A  + + M +QG +PDV+T + M
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           ++G CK G +  A   F  M  +GL P+   Y+  I G  K      A  +  +M     
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
            PD ITYN+L+ GLCK G +  A     +M+  G  PD  TY  +I    + G+      
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 300

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
           +F++M     SP +VTY  LI     R +L  A +Y+  M+ +G  P+   Y++L++GLC
Sbjct: 301 VFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLC 360

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
           +  +++    LF +ME  G+  N  T T LI   C A    EA+ L+  +    +   Y 
Sbjct: 361 KSGKLEGGCMLFDEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYA 419

Query: 700 THSALLLKQLDKDYKVH 716
            +S  ++  L K  KV+
Sbjct: 420 YNS--IISALIKSGKVN 434



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 133/445 (29%), Positives = 227/445 (51%), Gaps = 2/445 (0%)

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           T++ +++   K G + +A  L  E    GC+ +  TY  ++   ++N ++++A  L+  +
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
              G   +  +YN ++ G  + G L EA++L  ++V  G  P + TY  LI GL K  R 
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            +A   F EM  + +  D + Y  L+ G  ++G I +A  ++  + S+  VP VVT +T+
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           IDGLC+ G +  A ++ ++M  +G+ P+ + Y+ +++G CK   +  A E   +M +   
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            PD   Y   I G  K GD + A    +EML  G  PD+ TYN+L+ G CK G+ + A  
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 300

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           +   M      P+ +TY ++I    +   L +    + +M  +G  P    Y+ L+    
Sbjct: 301 VFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLC 360

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
             G+LE   M F EM+  G+  N  T   LI  LC+  R+D+A  LF  + +EG +P+ Y
Sbjct: 361 KSGKLEGGCMLFDEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPY 418

Query: 665 TYTILINENCNAGNWQEALRLYKEM 689
            Y  +I+    +G   E   +Y+EM
Sbjct: 419 AYNSIISALIKSGKVNEGQAVYQEM 443



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 131/435 (30%), Positives = 214/435 (49%), Gaps = 2/435 (0%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K  M+ Q   +  +   NG   D+     I+  L  N    +A  +   +   G  P+I 
Sbjct: 11  KAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIA 70

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TYN +L+  CK G ++EA++LL ++   GC+P+ VTY  LI G  +     +A  L ++M
Sbjct: 71  TYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEM 130

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
              GL +    Y  +I G  + G + +A ++ + M ++G  P + T + +I GLCK GR+
Sbjct: 131 ASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRI 190

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
             A   F  M  + + P+ + Y+ L++G C++  +  A  +  +++     P  +TYN L
Sbjct: 191 GAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNIL 250

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           IDGLC+ GD+  A+   + M+  G  PDV TY I+++G CK GN   A   F++M     
Sbjct: 251 IDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRC 310

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            P+   Y T I+G  K    ++A    + M  +G PPD   Y+ LV GLCK G LE    
Sbjct: 311 SPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCM 370

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           L  +M   G + +  T T +I    +   +     LFN + ++G+ P    Y  +I A  
Sbjct: 371 LFDEMERSG-VANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISALI 428

Query: 605 ARGRLELAFMYFSEM 619
             G++      + EM
Sbjct: 429 KSGKVNEGQAVYQEM 443



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 116/378 (30%), Positives = 181/378 (47%), Gaps = 2/378 (0%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           +I   + LL    K   +E+ + +  K++ NG  PDV     +I  L     S +A +++
Sbjct: 68  TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLF 127

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
           + M   G+    V Y  ++    + G++ +A  +   M  +GC P+ VT + +I G  + 
Sbjct: 128 KEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKA 187

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G +  A  + + M   GL  +   Y+ +I G  +   +  AL +  +M      P   TY
Sbjct: 188 GRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY 247

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           NILI GLCK G V+ AR  F EML     PD+ +YN L+ G+C++GN   A  +FD++ S
Sbjct: 248 NILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSS 307

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
               P VVTY TLI GLC+   L  A    ++M  +G  PD   Y+ +V+G CK G L  
Sbjct: 308 SRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEG 367

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
               F+EM R G+   +   T  I    K     EA  L   +  +G P     YN ++ 
Sbjct: 368 GCMLFDEMERSGVANSQ-TRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPY-AYNSIIS 425

Query: 532 GLCKLGSLEEANELLRKM 549
            L K G + E   + ++M
Sbjct: 426 ALIKSGKVNEGQAVYQEM 443


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 154/510 (30%), Positives = 250/510 (49%), Gaps = 36/510 (7%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K     + L     ++  G  PDV  C ++IK   +     KA  V  ++ E   +P + 
Sbjct: 80  KAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEIL-ESHTEPDVF 138

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
            YN ++  FCK   ++ A ++L  M+ RG  P+ VTYN++I      G L   R      
Sbjct: 139 AYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMI------GSLCNRR------ 186

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
            KLGL                      AL + ++++     PT+ TY ILI      G +
Sbjct: 187 -KLGL----------------------ALKVLDQLLLDNCMPTVITYTILIEATIVEGGI 223

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
           ++A     EML + ++PD+ +YN ++ G C+ G +  A  L   L S+   P V++YN L
Sbjct: 224 NEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNIL 283

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           +      G  +  ++L   M ++G  P+ +TY+I+++  C+ G +  A      M+ K L
Sbjct: 284 LRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKEL 343

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            PD ++Y   I+   K G    A  + + M++ G  PD++ YN ++  LCK G+  +A E
Sbjct: 344 TPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALE 403

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           +  K+ G G  P+  +Y ++I A    GD  R   +   M+ KG+ P  +TY  LI    
Sbjct: 404 IFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLC 463

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
             G +E A     +M+  G RP VI+YN ++ GLC++RRID A G+F +M E+G  PN+ 
Sbjct: 464 RDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNET 523

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREI 694
           TY +LI     AG   EA+ L   +  R++
Sbjct: 524 TYILLIEGIGFAGWRTEAMELANSLFSRDV 553



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 138/476 (28%), Positives = 245/476 (51%), Gaps = 1/476 (0%)

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +L+  CK G+  E+L  L  +  +G +P+ +    LI GF     +E+A  ++ ++L+  
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESH 132

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            +    +YN +I G+ +   +  A  +   M  RG  P + TYNI+I  LC   ++  A 
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               ++L  N +P +I+Y  L+      G I EA  L +E+ +R L+P + TYN +I G+
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 252

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G +E A +L  ++ ++G  PDVI+Y I++      G      +   EM  +G +P++
Sbjct: 253 CKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 312

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             Y+  I+   + G   EA  + + M+ K   PD  +Y+ L+  LCK G L+ A  ++  
Sbjct: 313 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 372

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M+ +G +PD + Y +I+ A  + G+  +  ++FN +   G  P + +Y  +I A  + G 
Sbjct: 373 MISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGD 432

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
              A      M  KG+ P+ ITYN+LI+ LCR   +++A GL  DME+ G  P   +Y I
Sbjct: 433 RSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNI 492

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           ++   C      +A+ ++ EM+++   P+  T+  L+       ++  A+E   SL
Sbjct: 493 VLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSL 548



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/388 (31%), Positives = 199/388 (51%), Gaps = 6/388 (1%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL---RDNGFSVKAREVYRMMGEFGI 239
           + K + +E    V N+M   G LPD+   N +I  L   R  G ++K   V   +     
Sbjct: 147 FCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALK---VLDQLLLDNC 203

Query: 240 KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
            P+++TY  ++++   EG + EA++LL EM  RG  P+  TYN +I G  + G +E+A  
Sbjct: 204 MPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAE 263

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
           LI  +   G K    SYN ++  +  +G   E   L  EM +RG  P   TY+ILI  LC
Sbjct: 264 LITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLC 323

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
           ++GR+ +A      M+ K + PD  SY+ L+   C+ G +  A  + D + S   +P +V
Sbjct: 324 RFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIV 383

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
            YNT++  LC+ G+   A ++   +   G  P+V +Y  M++     G+ S A      M
Sbjct: 384 NYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAM 443

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
           + KG+ PD   Y + I+   + G   EA  L ++M   GF P +I+YN+++ GLCK+  +
Sbjct: 444 ISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRI 503

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHA 567
           ++A  +  +M+  G  P+  TY  +I  
Sbjct: 504 DDAIGMFAEMIEKGCRPNETTYILLIEG 531



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 191/362 (52%), Gaps = 15/362 (4%)

Query: 171 VSIKILDLLLL-----------IYTKKSMVE----QCLLVFNKMLRNGLLPDVKNCNRII 215
           +++K+LD LLL           I  + ++VE    + + +  +ML  GLLPD+   N II
Sbjct: 190 LALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAII 249

Query: 216 KVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCS 275
           + +   G   +A E+   +   G KP +++YN +L +F  +G+  E  +L+ EM  RGC 
Sbjct: 250 RGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCE 309

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           PN VTY++LI+   R G +++A  +++ M++  L    +SY+P+I    ++G L  A+ +
Sbjct: 310 PNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGI 369

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
            + M++ G  P +  YN ++  LCK G  + A   F ++      P++ SYNT++     
Sbjct: 370 MDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWS 429

Query: 396 SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
            G+   A  +   + S+ + P  +TYN+LI  LCR G +E A  L ++M   G  P VI+
Sbjct: 430 CGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVIS 489

Query: 456 YTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML 515
           Y I++ G CK+  +  A   F EM+ KG +P+   Y   I G    G  +EA  L   + 
Sbjct: 490 YNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLF 549

Query: 516 AK 517
           ++
Sbjct: 550 SR 551



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 119/227 (52%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +++ + V   M+   L PD  + + +I  L   G    A  +   M   G  P IV YNT
Sbjct: 328 IDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNT 387

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +L + CK G   +ALE+  +++G GC PN  +YN +I+     G+  +A G++  M+  G
Sbjct: 388 ILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKG 447

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           +     +YN +I      GL+ EA+ L ++M   G  PT+ +YNI++ GLCK  R+ DA 
Sbjct: 448 VDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAI 507

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
             F EM+ K   P+  +Y  L+ G   +G   EA  L + L SR+++
Sbjct: 508 GMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVI 554



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 122/253 (48%)

Query: 198 KMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG 257
           +M   G  P+    + +I  L   G   +A  V ++M E  + P   +Y+ ++ + CKEG
Sbjct: 302 EMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEG 361

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
            +  A+ ++  M   GC P+ V YN ++    +NG   QA  +   +  +G   +  SYN
Sbjct: 362 RLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYN 421

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            +I      G    AL +   M+++GV P   TYN LI  LC+ G V +A     +M + 
Sbjct: 422 TMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQS 481

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
              P +ISYN +L G C+   I +A  +F E+  +   P   TY  LI+G+   G    A
Sbjct: 482 GFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEA 541

Query: 438 QQLKENMINQGIL 450
            +L  ++ ++ ++
Sbjct: 542 MELANSLFSRDVI 554



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 121/252 (48%), Gaps = 30/252 (11%)

Query: 129 TILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSM 188
           ++L+++IE  L    Y     +  +   G LD+ IG                        
Sbjct: 333 SVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIG------------------------ 368

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
                 + + M+ NG LPD+ N N I+  L  NG + +A E++  +   G  P++ +YNT
Sbjct: 369 ------IMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNT 422

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           M+ +    G+   AL ++  M  +G  P+ +TYN LI+   R+G +E+A GL+ DM + G
Sbjct: 423 MISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSG 482

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            + +  SYN ++ G  +   + +A+ +  EM+ +G  P   TY +LI G+   G  ++A 
Sbjct: 483 FRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAM 542

Query: 369 HRFFEMLRKNVI 380
                +  ++VI
Sbjct: 543 ELANSLFSRDVI 554



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 8/217 (3%)

Query: 516 AKGFPPDLITYNV-------LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
           A+  P  L +Y+        L++  CK G   E+   L  +V  G+ PD I  T +I   
Sbjct: 54  AEARPAHLQSYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGF 113

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
               ++ +   +   +L     P +  Y  +I       R+E A    + M+ +G  P++
Sbjct: 114 FNFKNIEKASRVME-ILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDI 172

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
           +TYN +I  LC  R++  A  +   +  +  +P   TYTILI      G   EA++L +E
Sbjct: 173 VTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEE 232

Query: 689 MLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
           ML R + PD  T++A++     +     A E + SLT
Sbjct: 233 MLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLT 269


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 155/524 (29%), Positives = 247/524 (47%), Gaps = 38/524 (7%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           PD      +I+ L D G    A  +   M     +PS+VTY  +L++ CK     +A+++
Sbjct: 135 PDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKV 194

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG--- 322
           L EM+ +GC+PN VTYNV+I G  R   ++ AR ++  +   G +    SY  ++ G   
Sbjct: 195 LDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCA 254

Query: 323 --------------------------------YSEKGLLVEALNLEEEMVTRGVAPTLAT 350
                                           +   G++  A+ + + M   G       
Sbjct: 255 AKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTL 314

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
            NI+I  +CK GRV DA      M      PD ISY T+L G CR+G   +A  L +E+ 
Sbjct: 315 CNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMV 374

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
            +N  P  VT+NT I  LC+ G ++ A  L E M   G    ++TY  +VNG C  G + 
Sbjct: 375 RKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVD 434

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            A E FN +     +P+   YTT + G         A  L  EM+    P +++T+NVLV
Sbjct: 435 SALELFNSL---PCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLV 491

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
              C+ G +EEA EL+++M+  G  P+ IT+ +++    E  +     +L + ++ KG+S
Sbjct: 492 SFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGIS 551

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
              +TY+ ++   +   R+E A   F  +Q  G+RP  + YN +++ LC+    D+A   
Sbjct: 552 LDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDF 611

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           F  M     +PN+ TY ILI      G  +EA  +  E+  R +
Sbjct: 612 FAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSELCSRGV 655



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 151/506 (29%), Positives = 246/506 (48%), Gaps = 12/506 (2%)

Query: 203 GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           G  PDV  C ++I+ L   G +  A  V R     G    +  YNT++  +C+ G +  A
Sbjct: 65  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAA 124

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
             L+  M      P+  TY  LI G    G +  A  L+ DML+   + S  +Y  ++  
Sbjct: 125 RRLIASMP---VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEA 181

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
             +     +A+ + +EM  +G  P + TYN++I G+C+  RV DAR     +      PD
Sbjct: 182 VCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPD 241

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
            +SY T+L G C +    +  +LF E+   N VP  VT++ L+   CR G +E A ++ +
Sbjct: 242 TVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLD 301

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            M   G   +     I++N  CK G +  A EF N M   G  PD  +YTT + G  + G
Sbjct: 302 RMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAG 361

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
              +A  L  EM+ K  PP+ +T+N  +  LC+ G +++A  L+ +M   G     +TY 
Sbjct: 362 RWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYN 421

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
           ++++     G +    +LFN++      P  +TYT L+       RL+ A    +EM   
Sbjct: 422 ALVNGFCVQGRVDSALELFNSL---PCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQN 478

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL---INENCNAGNW 679
               NV+T+N L++  C+   +++A  L   M E G  PN  T+  L   I E+CN+   
Sbjct: 479 DCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNS--- 535

Query: 680 QEALRLYKEMLDREIEPDYCTHSALL 705
           +EAL L   ++ + I  D  T+S+++
Sbjct: 536 EEALELLHGLVSKGISLDTITYSSIV 561



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 146/516 (28%), Positives = 250/516 (48%), Gaps = 13/516 (2%)

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
           +R+ +++  +  +  AR V R     G  P +     ++ + C+ G   +A  +L   +G
Sbjct: 40  SRLRRLIARDDLAEAARLVERSTSR-GEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEG 98

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
            G   +   YN L+ G+ R G L+ AR LI  M    +   A++Y P+I G  ++G + +
Sbjct: 99  SGAPVDVFAYNTLVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPLIRGLCDRGRVGD 155

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
           AL+L ++M+ R   P++ TY +L+  +CK      A     EM  K   P+I++YN ++ 
Sbjct: 156 ALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIIN 215

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC---RYGDLEVAQQLKENMINQG 448
           G CR   + +A  + + L S    P  V+Y T++ GLC   R+ D+EV   L   M+   
Sbjct: 216 GMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEV---LFCEMVENN 272

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
            +P+ +T+ ++V   C+ G +  A E  + M   G   +       I    K G   +A+
Sbjct: 273 CVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAF 332

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
                M + G  PD I+Y  ++ GLC+ G  E+A ELL +MV     P+ +T+ + I   
Sbjct: 333 EFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICIL 392

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
            + G + +   L   M   G S  +VTY  L++    +GR++ A   F+ +  +   PN 
Sbjct: 393 CQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCE---PNT 449

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
           ITY  L+ GLC   R+D A  L  +M +     N  T+ +L++  C  G  +EA+ L ++
Sbjct: 450 ITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQ 509

Query: 689 MLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           M++    P+  T + LL    +      A+E L  L
Sbjct: 510 MMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGL 545



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 138/489 (28%), Positives = 235/489 (48%), Gaps = 3/489 (0%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           S+    +LL    K S   Q + V ++M   G  P++   N II  +        AR++ 
Sbjct: 171 SVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQIL 230

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             +  +G +P  V+Y T+L   C     ++   L  EM    C PN VT+++L+  F R 
Sbjct: 231 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRG 290

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G +E+A  ++  M + G   +    N +I    ++G + +A      M + G +P   +Y
Sbjct: 291 GMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISY 350

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
             ++ GLC+ GR  DA+    EM+RKN  P+ +++NT +   C+ G I +A LL +++  
Sbjct: 351 TTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPE 410

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
                 +VTYN L++G C  G ++ A +L  ++  +   P+ ITYT ++ G C    L  
Sbjct: 411 YGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCE---PNTITYTTLLTGLCHAERLDA 467

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A E   EM++     +   +   ++   + G   EA  L ++M+  G  P+LIT+N L+ 
Sbjct: 468 AAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLD 527

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           G+ +  + EEA ELL  +V  G   D ITY+SI+        +     +F+ +   G+ P
Sbjct: 528 GITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRP 587

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
             V Y  ++ A   R   + A  +F+ M      PN  TY  LI GL R   + +A  + 
Sbjct: 588 KAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVL 647

Query: 652 IDMEEEGIL 660
            ++   G+L
Sbjct: 648 SELCSRGVL 656



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 213/439 (48%), Gaps = 21/439 (4%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWV-VETVVCVNMHGILDVLIGGGLSSCVSIKI-L 176
           G + D   + T+L+     GL  +  W  VE + C  +            ++CV  ++  
Sbjct: 237 GFQPDTVSYTTVLK-----GLCAAKRWEDVEVLFCEMVE-----------NNCVPNEVTF 280

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           D+L+  + +  MVE+ + V ++M  +G   +   CN +I  +   G    A E    MG 
Sbjct: 281 DMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGS 340

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
           +G  P  ++Y T+L   C+ G  ++A ELL EM  + C PN VT+N  I    + G ++Q
Sbjct: 341 YGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQ 400

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  LI  M + G  V   +YN ++ G+  +G +  AL L   +      P   TY  L+ 
Sbjct: 401 AILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSL---PCEPNTITYTTLLT 457

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           GLC   R+  A     EM++ +   +++++N L+  +C+ G + EA  L  ++      P
Sbjct: 458 GLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTP 517

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
            ++T+NTL+DG+    + E A +L   ++++GI  D ITY+ +V+   +   +  A + F
Sbjct: 518 NLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMF 577

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           + +   G++P    Y   ++   K  +T  A      M++    P+  TY +L+ GL + 
Sbjct: 578 HAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLARE 637

Query: 537 GSLEEANELLRKMVGDGFI 555
           G L+EA  +L ++   G +
Sbjct: 638 GLLKEARYVLSELCSRGVL 656



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 88/223 (39%), Gaps = 38/223 (17%)

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
           D +EA RL E   ++G  PD+     L+  LC+ G   +A  +LR   G G   D     
Sbjct: 50  DLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVD----- 104

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
                                         +  Y  L+  +   GRL+ A    + M V 
Sbjct: 105 ------------------------------VFAYNTLVAGYCRYGRLDAARRLIASMPVP 134

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
              P+  TY  LI GLC   R+  A  L  DM      P+  TYT+L+   C +  + +A
Sbjct: 135 ---PDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQA 191

Query: 683 LRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
           +++  EM  +   P+  T++ ++     +D    A + L  L+
Sbjct: 192 MKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLS 234


>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
 gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
          Length = 603

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 144/449 (32%), Positives = 239/449 (53%), Gaps = 1/449 (0%)

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           M++SF + G ++EA+E++ EM  +G  PN  T N +I   S  G +E A  L  +M   G
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           ++  + SY  ++  Y + G ++EA      M+ RG     AT+ ++I      G  + A 
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRAL 260

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F  ++   + P++I++  ++ G C+ G+I +AF + +E+  +   P V T+ +LIDGL
Sbjct: 261 WYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGL 320

Query: 429 CRYGDLEVAQQLKENMI-NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           C+ G  E A +L   ++ ++   P+V+TYT M++G C+   L+ A    + M  +GL P+
Sbjct: 321 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPN 380

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              YTT I G  K G+   AY L   M ++GF P+L TYN +V+GLCK G ++EA ++L 
Sbjct: 381 TNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLE 440

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
               +G  PD  TY  ++    +  ++R+   LFN ML+ G+ P + +YT LI       
Sbjct: 441 DGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCREN 500

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
           R++ + M+F E    GI P   TY ++I G CR   +  A   F  + + G  P+  TY 
Sbjct: 501 RMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYG 560

Query: 668 ILINENCNAGNWQEALRLYKEMLDREIEP 696
            +I+  C      EA  LY  M+++ + P
Sbjct: 561 AIISGLCKQSKRDEARSLYDSMIEKGLVP 589



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 147/450 (32%), Positives = 229/450 (50%), Gaps = 1/450 (0%)

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           +A E+   M   G+ P+  T N ++    + G ++ A  L  EM  RG  P+ ++Y V++
Sbjct: 153 EAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRVMV 212

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
             + + G + +A   +  ML+ G  V   ++  II  +S KG    AL     +V  G+ 
Sbjct: 213 VMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLE 272

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P L  +  +I GLCK G +  A     EM+ K   P++ ++ +L+ G C+ G   +AF L
Sbjct: 273 PNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRL 332

Query: 406 FDEL-RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
           F +L RS N  P V+TY  +I G CR   L  A+ L   M  QG++P+  TYT +++G C
Sbjct: 333 FLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHC 392

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
           K GN   A +  N M  +G  P+   Y   + G  K G   EAY++ E+    G  PD  
Sbjct: 393 KAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKF 452

Query: 525 TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM 584
           TYN+L+   CK  ++ +A  L  KM+  G  PD  +YT++I        ++     F   
Sbjct: 453 TYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEA 512

Query: 585 LRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRI 644
           +R G+ PT  TYT +I  +   G L LA  +F  +   G  P+ ITY A+I+GLC+  + 
Sbjct: 513 VRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKR 572

Query: 645 DQAYGLFIDMEEEGILPNKYTYTILINENC 674
           D+A  L+  M E+G++P + T   L  E C
Sbjct: 573 DEARSLYDSMIEKGLVPCEVTRITLAYEYC 602



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 126/433 (29%), Positives = 215/433 (49%), Gaps = 4/433 (0%)

Query: 284 LITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG 343
           ++  FS  G L++A  ++ +M   GL  +  + N II   SE GL+  A  L EEM  RG
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200

Query: 344 VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF 403
           V P   +Y +++   CK G + +A      ML +  + D  ++  ++  +   G    A 
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRAL 260

Query: 404 LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
             F  L    L P ++ +  +I+GLC+ G ++ A ++ E M+ +G  P+V T+T +++G 
Sbjct: 261 WYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGL 320

Query: 464 CKMGNLSMAREFFNEMLR-KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
           CK G    A   F +++R +  +P+   YT  I+G  +    + A  L   M  +G  P+
Sbjct: 321 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPN 380

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
             TY  L+ G CK G+ E A +L+  M  +GF P+  TY +I++   + G ++    +  
Sbjct: 381 TNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLE 440

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
           +  + GL P   TY +L+  H  +  +  A   F++M   GI+P++ +Y  LI   CR  
Sbjct: 441 DGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCREN 500

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
           R+ ++   F +    GI+P   TYT +I   C  GN   A++ +  + D    PD  T+ 
Sbjct: 501 RMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYG 560

Query: 703 AL---LLKQLDKD 712
           A+   L KQ  +D
Sbjct: 561 AIISGLCKQSKRD 573



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 110/361 (30%), Positives = 188/361 (52%), Gaps = 1/361 (0%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
             L++  ++ K    + L  F +++  GL P++ N   +I+ L   G   +A E+   M 
Sbjct: 243 FTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMV 302

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM-QGRGCSPNGVTYNVLITGFSRNGEL 294
             G KP++ T+ +++D  CK+G  ++A  L  ++ +     PN +TY  +I+G+ R  +L
Sbjct: 303 GKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKL 362

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
            +A  L+  M + GL  + ++Y  +I G+ + G    A +L   M + G +P L TYN +
Sbjct: 363 NRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAI 422

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           + GLCK GRV +A     +  +  + PD  +YN L+  +C+  NI +A  LF+++    +
Sbjct: 423 VNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGI 482

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P + +Y TLI   CR   ++ ++   E  +  GI+P   TYT M+ G C+ GNL++A +
Sbjct: 483 QPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMK 542

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
           FF+ +   G  PD   Y   I+G  K     EA  L + M+ KG  P  +T   L +  C
Sbjct: 543 FFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCEVTRITLAYEYC 602

Query: 535 K 535
           K
Sbjct: 603 K 603



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 78/161 (48%)

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           ++ +  E+G L+   ++   M  +GL P   T   +I   +  G +E A + F EM V+G
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
           ++P+ I+Y  ++   C++  I +A      M E G + +  T+T++I+     G    AL
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRAL 260

Query: 684 RLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
             ++ ++D  +EP+    + ++     +     A E LE +
Sbjct: 261 WYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEM 301


>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 146/480 (30%), Positives = 248/480 (51%)

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           +A E+   M E G++PS      +     + G+     +L  ++  RG  P   T++ +I
Sbjct: 4   QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGII 63

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            GF R G +     L+  M K   + +A +YN +I     +G   +AL     M+ RG  
Sbjct: 64  LGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCN 123

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           PT+ T+N +I   CK G V +AR  F  +      P+ I YNTL+ GY +   I +A +L
Sbjct: 124 PTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANML 183

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
           ++E+R + + P  +T+N L+ G  +YG  E   +L +++   G+LPD   + I V+G C 
Sbjct: 184 YEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCW 243

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
            G L  A EF  +ML KGL P   A+ + IA   + G   +A+   + M+  G  P   T
Sbjct: 244 AGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPST 303

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
            + L+ GL   G L+EA EL+ +M+  G   +++ +T ++    + GD+   + L+  M 
Sbjct: 304 CSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEME 363

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
           R+G+ P +V ++  I   + +G +E A+  F EM  KG+ PN   YN+LI G C+  +++
Sbjct: 364 RRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLN 423

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +A  L   M   G+LP+ +T  ++I   C  G  + A+ ++ +M    + PD  T++ L+
Sbjct: 424 EALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLI 483



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 148/480 (30%), Positives = 256/480 (53%), Gaps = 1/480 (0%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P+    N +I      G +  A   + +M E G  P++VT+NT++++FCKEG + EA +L
Sbjct: 89  PNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKL 148

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
              ++  G SPN + YN L+ G+ +  E++QA  L  +M K G+     ++N ++ G+ +
Sbjct: 149 FDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYK 208

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
            G   +   L +++   G+ P  + ++I + GLC  GR+ +A     +ML K + P II+
Sbjct: 209 YGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIA 268

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           +N+++  Y ++G   +AF  +  +    L P+  T ++L+ GL   G L+ A +L   MI
Sbjct: 269 FNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMI 328

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
            +G+  + + +T++++   K G++  A+  + EM R+G+ PD  A++  I G  K G   
Sbjct: 329 EKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVE 388

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           EAY +  EML KG  P+   YN L+ G CK G L EA +L + M   G +PD  T   II
Sbjct: 389 EAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMII 448

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
               + G +R   ++F +M + GLSP ++TY  LI+ +     +  A    + M   G  
Sbjct: 449 GGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSN 508

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           P++ TYN  I+G C  RR+++A  +  ++   GIL   +     +N +     +Q AL+L
Sbjct: 509 PDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGILSFSFACPPTLNAHTKH-FYQWALKL 567



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 133/439 (30%), Positives = 224/439 (51%)

Query: 186 KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVT 245
           +      L  FN M+  G  P V   N +I      G  V+AR+++  + E G  P+ + 
Sbjct: 104 RGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIM 163

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           YNT+++ + K  E+ +A  L  EM+ +G +P+G+T+N+L++G  + G  E    L++D+ 
Sbjct: 164 YNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDIS 223

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
            LGL      ++  + G    G L EA+    +M+ +G++P++  +N +I    + G   
Sbjct: 224 VLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLED 283

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
            A   +  M+   + P   + ++LL G   +G + EA  L  ++  + L    + +  L+
Sbjct: 284 KAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLL 343

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           D   + GD+  AQ L   M  +GI PDV+ ++  ++G  K G +  A   F EMLRKGL 
Sbjct: 344 DKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLI 403

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           P+ FAY + I G  K G  +EA +L++ M  +G  PD+ T N+++ GLCK G +  A  +
Sbjct: 404 PNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINV 463

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
              M   G  PD ITY ++I+   +  D+    +L N M   G +P L TY + IH   +
Sbjct: 464 FMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCS 523

Query: 606 RGRLELAFMYFSEMQVKGI 624
             R+  A +   E+   GI
Sbjct: 524 SRRMNRAVLMLDELVSAGI 542



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 143/500 (28%), Positives = 244/500 (48%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F  ++R G  P     + II      G       +  +M +F  +P+   YN ++++ C
Sbjct: 43  LFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACC 102

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
             G   +AL     M  RGC+P  VT+N +I  F + G + +AR L   + ++G   +A 
Sbjct: 103 IRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAI 162

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
            YN ++ GY +   + +A  L EEM  +G+AP   T+NIL+ G  K+GR  D      ++
Sbjct: 163 MYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDI 222

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
               ++PD   ++  + G C +G + EA     ++  + L P+++ +N++I    + G  
Sbjct: 223 SVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLE 282

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A +  + M++ G+ P   T + ++ G    G L  A E   +M+ KGL  +  A+T  
Sbjct: 283 DKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVL 342

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           +    K GD   A  L  EM  +G  PD++ ++  + GL K G +EEA  +  +M+  G 
Sbjct: 343 LDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGL 402

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
           IP++  Y S+I    + G L     L   M  +GL P + T  ++I     +GR+  A  
Sbjct: 403 IPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAIN 462

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F +M   G+ P++ITYN LING C+   +  A  L   M   G  P+  TY I I+  C
Sbjct: 463 VFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFC 522

Query: 675 NAGNWQEALRLYKEMLDREI 694
           ++     A+ +  E++   I
Sbjct: 523 SSRRMNRAVLMLDELVSAGI 542



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 94/285 (32%), Positives = 157/285 (55%), Gaps = 2/285 (0%)

Query: 166 GLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSV 225
           GLS   SI   + ++  Y++  + ++    +  M+  GL P    C+ ++  L  NG   
Sbjct: 261 GLSP--SIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQ 318

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           +A E+   M E G+  + + +  +LD F K G++  A  L  EM+ RG  P+ V ++  I
Sbjct: 319 EATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFI 378

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            G S+ G +E+A  +  +ML+ GL  +  +YN +ICG+ + G L EAL LE+ M  RG+ 
Sbjct: 379 DGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLL 438

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P + T N++I GLCK GR+  A + F +M +  + PDII+YNTL+ GYC++ ++  A  L
Sbjct: 439 PDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNL 498

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
            + + +    P + TYN  I G C    +  A  + + +++ GIL
Sbjct: 499 VNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIL 543



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 155/330 (46%), Gaps = 4/330 (1%)

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
           R G+ G  + LF ++  R   P   T++ +I G CR G + + + L   M      P+  
Sbjct: 33  RVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAF 92

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
            Y I++N  C  G  S A  +FN M+ +G  P    + T I    K G+  EA +L + +
Sbjct: 93  AYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGL 152

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
              GF P+ I YN L++G  K+  +++AN L  +M   G  PD IT+  ++    + G  
Sbjct: 153 KEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGRE 212

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
             G  L  ++   GL P    + + +      GRL+ A  +  +M  KG+ P++I +N++
Sbjct: 213 EDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSV 272

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           I    +    D+A+  +  M   G+ P+  T + L+      G  QEA  L  +M+++ +
Sbjct: 273 IAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGL 332

Query: 695 EPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
             +    + L    LDK +K   V   +SL
Sbjct: 333 SVNNMAFTVL----LDKFFKRGDVVGAQSL 358



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 153/306 (50%)

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           +A  +   +R   + P+      L   L R GD     +L +++I +G  P   T++ ++
Sbjct: 4   QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGII 63

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
            G C+ G + +     + M +   +P+ FAY   I      G TS+A      M+ +G  
Sbjct: 64  LGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCN 123

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           P ++T+N +++  CK G++ EA +L   +   GF P+ I Y ++++  ++M ++ +   L
Sbjct: 124 PTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANML 183

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
           +  M +KG++P  +T+ +L+  H   GR E       ++ V G+ P+   ++  ++GLC 
Sbjct: 184 YEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCW 243

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
             R+D+A    +DM E+G+ P+   +  +I     AG   +A   YK M+   + P   T
Sbjct: 244 AGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPST 303

Query: 701 HSALLL 706
            S+LL+
Sbjct: 304 CSSLLM 309


>gi|357115831|ref|XP_003559689.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Brachypodium distachyon]
          Length = 968

 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 161/575 (28%), Positives = 268/575 (46%), Gaps = 76/575 (13%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +FN+MLR GL P +     +I     NG   +A  V   M   G+KPS VTY+ ML+   
Sbjct: 351 IFNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTYSAMLN--- 407

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
             G + EA  +   M+  GCSP+  TY  L+ G  + G L QA+  +  ++ +   +   
Sbjct: 408 --GSVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQK 465

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           + N ++ G    G L EAL+L E+MVT    P + TY IL+ G C+ G++  A      M
Sbjct: 466 TLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQMM 525

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR-NLVPTVVTYNTLIDGLCRYGD 433
           L K ++PDI++Y  LL G  + G +  A  LF E+  +  +    + YN++++G  + G 
Sbjct: 526 LEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGK 585

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           L   +    +M    + P+  +Y I+++G  K G+LS +   + +M+RKG++P    Y  
Sbjct: 586 LHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRL 645

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLI----------------------------- 524
            I G  K G    A +  ++M+ +G  PD +                             
Sbjct: 646 LILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWLY 705

Query: 525 ------TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL---- 574
                 TY+ +++GL +   L+ + ++LR MV  G  P H  Y ++I+A    GD+    
Sbjct: 706 MSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDINGAF 765

Query: 575 -------------------------------RRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
                                            G  +F +++R G+ PT+ T+T L+H  
Sbjct: 766 RLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLMHGL 825

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
               ++  A    S M+  G++ +V+TYN LI GLC+++ +  A  L+ +M+ +G+ PN 
Sbjct: 826 CKEAKISDALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVSDALELYEEMKSKGLRPNV 885

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
            TYT L       G   E  +L  ++ DR + P Y
Sbjct: 886 TTYTTLTEAIYGTGRTLEGEKLLNDIEDRGLVPSY 920



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 157/510 (30%), Positives = 257/510 (50%), Gaps = 12/510 (2%)

Query: 200 LRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEM 259
           +++  LP+V   N I+      G    A  V   M + G++  + TYN M+D  CK    
Sbjct: 251 MKSCSLPNVITYNTILHWYVKKGRFKAAMCVLEDMEKNGVEADVYTYNIMIDKLCKMKRS 310

Query: 260 QEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI 319
             A  LL  M+G   +P+  TYN LI GF    ++  A  +  +ML+ GLK S  +Y  +
Sbjct: 311 THAYLLLKRMRGDNLAPDECTYNTLIKGFFDESKMMLAIHIFNEMLRQGLKPSLATYTTL 370

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           I GY   G + EAL +  EM   GV P+  TY+ ++      G V +A   +  M +   
Sbjct: 371 IDGYCRNGTIDEALRVLYEMQVAGVKPSEVTYSAMLN-----GSVHEAFSVYDNMEKYGC 425

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV---TYNTLIDGLCRYGDLEV 436
            PD+ +Y  LL G C+ G++ +A      +     +P+ +   T N L+ G+C +G L+ 
Sbjct: 426 SPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVH---IPSAIDQKTLNALLLGICNHGSLDE 482

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
           A  L E M+    +PD+ TYTI+++G C+ G +  A      ML KGL PD   YT  + 
Sbjct: 483 ALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQMMLEKGLVPDIVTYTCLLK 542

Query: 497 GELKLGDTSEA-YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
           G +K G    A Y  QE +  +G   D I YN +++G  K G L +    +  M  +   
Sbjct: 543 GLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGKLHKVEMTIYDMNQNKVY 602

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           P+  +Y  ++H  ++ G L R   L+ +M+RKG+ PT VTY +LI   +  G +E+A  +
Sbjct: 603 PNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLILGLSKHGMIEIAVKF 662

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
             +M ++GI P+ ++++ LIN      R+  A  LF  M+   + P+  TY+ +IN    
Sbjct: 663 LDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWLYMSPSSKTYSAMINGLIR 722

Query: 676 AGNWQEALRLYKEMLDREIEPDYCTHSALL 705
               Q +  + ++M++  +EP +  + AL+
Sbjct: 723 KNWLQHSCDVLRDMVESGLEPKHTHYIALI 752



 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 176/663 (26%), Positives = 312/663 (47%), Gaps = 54/663 (8%)

Query: 105 RIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMH--GILDVL 162
           ++AL+    +  + G++R   ++C   +IL ++ +   A  +++ +         +   L
Sbjct: 85  KLALKILSSIVQRSGLERITHIYCMAAQILTQAKMHSQAMSLLKHLAMTGFSCSAVFSSL 144

Query: 163 IGGGLSSCVSIK-ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDN 221
           +   +S C S   + DLL+  Y K+  V    +    M   G       CN ++  L + 
Sbjct: 145 LCT-ISRCDSNPLVFDLLVNAYVKEKRVVDASMAILFMDNCGFKASAHACNAVLNALVEI 203

Query: 222 GFSVKAREVYRMMGEFGIKP---SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCS-PN 277
           G   +++ V+  + E  ++     + T N +L+S C EG ++ A  ++ +M  + CS PN
Sbjct: 204 G---ESKHVWFFLKEGLVRKFPLDVTTCNIVLNSMCIEGNLKGAKHMIHKM--KSCSLPN 258

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
            +TYN ++  + + G  + A  ++ DM K G++   ++YN +I    +      A  L +
Sbjct: 259 VITYNTILHWYVKKGRFKAAMCVLEDMEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLK 318

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
            M    +AP   TYN LI G     ++  A H F EMLR+ + P + +Y TL+ GYCR+G
Sbjct: 319 RMRGDNLAPDECTYNTLIKGFFDESKMMLAIHIFNEMLRQGLKPSLATYTTLIDGYCRNG 378

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
            I EA  +  E++   + P+ VTY+ +++G      +  A  + +NM   G  PDV TY 
Sbjct: 379 TIDEALRVLYEMQVAGVKPSEVTYSAMLNG-----SVHEAFSVYDNMEKYGCSPDVYTYR 433

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
            ++ G CK G+L  A+EF + ++      D+      + G    G   EA  L E+M+  
Sbjct: 434 NLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQKTLNALLLGICNHGSLDEALDLCEKMVTI 493

Query: 518 GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
            F PD+ TY +L+ G C+ G +  A  LL+ M+  G +PD +TYT ++   ++ G ++  
Sbjct: 494 NFIPDIHTYTILLSGFCRKGKIVPAVILLQMMLEKGLVPDIVTYTCLLKGLIKEGQVKAA 553

Query: 578 RDLF--------------------NNMLRKG----------------LSPTLVTYTVLIH 601
             LF                    N  L+ G                + P   +Y +L+H
Sbjct: 554 SYLFQEIICKEGMYADCIAYNSMMNGYLKAGKLHKVEMTIYDMNQNKVYPNPASYNILMH 613

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
            H  +G L  +   + +M  KGI+P  +TY  LI GL +   I+ A      M  EGI P
Sbjct: 614 GHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLILGLSKHGMIEIAVKFLDKMVLEGIYP 673

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYL 721
           ++ ++ +LIN         +AL+L+  M    + P   T+SA++   + K++  H+ + L
Sbjct: 674 DRLSFDVLINAFSEKSRMSDALQLFNCMKWLYMSPSSKTYSAMINGLIRKNWLQHSCDVL 733

Query: 722 ESL 724
             +
Sbjct: 734 RDM 736



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/406 (25%), Positives = 199/406 (49%), Gaps = 13/406 (3%)

Query: 117 QPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKIL 176
           + G+  D   +  +L+ LI+ G +++A ++ + ++C            G  + C++    
Sbjct: 527 EKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKE----------GMYADCIA---Y 573

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           + ++  Y K   + +  +    M +N + P+  + N ++      G   ++  +Y+ M  
Sbjct: 574 NSMMNGYLKAGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVR 633

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            GIKP+ VTY  ++    K G ++ A++ L +M   G  P+ ++++VLI  FS    +  
Sbjct: 634 KGIKPTNVTYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSD 693

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  L   M  L +  S+ +Y+ +I G   K  L  + ++  +MV  G+ P    Y  LI 
Sbjct: 694 ALQLFNCMKWLYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALIN 753

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
             C++G ++ A     EM    ++P  ++ ++++ G  + G + E  ++F  +    +VP
Sbjct: 754 AKCRFGDINGAFRLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVP 813

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
           T+ T+ TL+ GLC+   +  A  LK  M + G+  DV+TY +++ G CK+  +S A E +
Sbjct: 814 TIATFTTLMHGLCKEAKISDALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVSDALELY 873

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            EM  KGL+P+   YTT        G T E  +L  ++  +G  P 
Sbjct: 874 EEMKSKGLRPNVTTYTTLTEAIYGTGRTLEGEKLLNDIEDRGLVPS 919


>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
 gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
          Length = 535

 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 142/428 (33%), Positives = 226/428 (52%), Gaps = 3/428 (0%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P  VTY  ++D   K G     LE   +M    C P  +TY VL+ G  +  ++E+A  +
Sbjct: 104 PDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDV 163

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
             +M++ G K    +Y+ +I G S+ G + EA  L + M+ RG  PT   Y  ++ GLCK
Sbjct: 164 FEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCK 223

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            GR+ +A     EM R+ + P + +Y+ ++ GY   G + EAF + +E+  R+  P  ++
Sbjct: 224 CGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTIS 283

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y   I+ L   G  E A+++ E M+ +G  PD+ TY I+++  CK G+++ A      M 
Sbjct: 284 YTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMD 343

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           +  ++P+R+ YT  + G +K     EA  L + +L  G  P  +TYN +++ LCKL  ++
Sbjct: 344 KAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMD 403

Query: 541 EANELLRKMV--GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           EA ELLR+M    +   P  +TY+ IIH   ++G   R  DL   M+  G+ P   TYT 
Sbjct: 404 EALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTS 463

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           LI   A  G++  A     EM   GI P+  TY  L+  LCR   +D A+ L  +M   G
Sbjct: 464 LIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCR-SDVDAAWDLLQEMMRNG 522

Query: 659 ILPNKYTY 666
             PN++T+
Sbjct: 523 HTPNEFTF 530



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 145/475 (30%), Positives = 246/475 (51%), Gaps = 9/475 (1%)

Query: 240 KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
           +P++ ++N +L  F    + +    LL EM+ RG + NG T+ V+++      +L++A  
Sbjct: 26  EPNVSSFNILLRGFAARDDFEVVNALLREMKARGITSNGATHGVILSALCARRDLDKAVS 85

Query: 300 LIRDMLKLGLKV-------SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
                 +   ++        + +Y  I+ G  + G     L   E+MV     PTL TY 
Sbjct: 86  YFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYT 145

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
           +L+ GLCK  +V  A   F EM+RK   PDII+Y++L+ G  ++G + EA  L D + +R
Sbjct: 146 VLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIAR 205

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
              PT V Y +++ GLC+ G ++ A +  + M  + + P V TY+ +V G   MG +  A
Sbjct: 206 GPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEA 265

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
                EM  +   PD  +YT  I     +G   EA ++ E M+ KG  PD+ TY +++  
Sbjct: 266 FAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDN 325

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
            CK GS+  A  +LR M      P+   YT I+   ++   L    +L+  +L+ G+ P+
Sbjct: 326 FCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPS 385

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKG--IRPNVITYNALINGLCRLRRIDQAYGL 650
            VTY  +I+A     +++ A     EMQ +   + P+++TY+ +I+GL ++   ++A+ L
Sbjct: 386 TVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDL 445

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             +M + G++P+ +TYT LI     AG    A+ L +EML   I PD  T+  L+
Sbjct: 446 LAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLV 500



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 136/487 (27%), Positives = 239/487 (49%), Gaps = 12/487 (2%)

Query: 247 NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
           N++L +  + G++ +AL      Q     PN  ++N+L+ GF+   + E    L+R+M  
Sbjct: 1   NSLLLALVRGGQLSDALGFF---QSSISEPNVSSFNILLRGFAARDDFEVVNALLREMKA 57

Query: 307 LGLKVSAHSYNPII---CGYSEKGLLVEALNLEEEMVTRGV----APTLATYNILIYGLC 359
            G+  +  ++  I+   C   +    V   N   E   R      AP   TY  ++ GL 
Sbjct: 58  RGITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLF 117

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
           K G        + +M+     P +++Y  L+ G C++  +  A  +F+E+  +   P ++
Sbjct: 118 KAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDII 177

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
            Y++LIDGL + G ++ A++L + MI +G  P  + YT +V G CK G +  A +   EM
Sbjct: 178 AYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEM 237

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
            R+ L+P    Y+  + G + +G   EA+ + EEM  +   PD I+Y + +  L  +G  
Sbjct: 238 RRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRR 297

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           EEA ++   MV  G  PD  TY  II    + G +     +   M +  + P    YT++
Sbjct: 298 EEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMI 357

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME--EE 657
           +       RLE A   +  +   GI P+ +TYN +IN LC+L+++D+A  L  +M+  +E
Sbjct: 358 MDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKE 417

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHA 717
            + P+  TY+++I+     G  + A  L  EM+D  + PD  T+++L+           A
Sbjct: 418 ELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRA 477

Query: 718 VEYLESL 724
           +E LE +
Sbjct: 478 MELLEEM 484


>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
          Length = 641

 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 158/547 (28%), Positives = 272/547 (49%), Gaps = 43/547 (7%)

Query: 75  NNRWVSDHFQAVVSDPELLVR-----VLNRIREKPRIALRFFRWVET-QPGVKRDEFVFC 128
           +N+W  ++ Q   S+ E+L       VL+RIR+   + L+FF WV   Q     + F + 
Sbjct: 41  HNQW-EENLQTRFSESEVLASDVAHLVLDRIRD-VELGLKFFDWVSRGQYSGPINGFAYS 98

Query: 129 TILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSM 188
           ++L++L  S +      V+E +    M    + +               +++  Y+   +
Sbjct: 99  SLLKLLARSRVFSEMEVVLENMRVEEMSPTREAM--------------SIVIQAYSDSGL 144

Query: 189 VEQCLLVFNKMLRN-GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM-------GEF--- 237
           VE+ L ++  +L+     PDV  CN ++ +L   G    AR+   +M       G+    
Sbjct: 145 VEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKFTCIMVKGLCKEGKLEEG 204

Query: 238 ----------GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITG 287
                     G  P+I+ YNT++D +CK+G+M+ A  L  E++ +G  P   TY  +I G
Sbjct: 205 RKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIING 264

Query: 288 FSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPT 347
           F + G+ +    L+ +M   GL V+   YN II    + G +V+A+   E M+  G  P 
Sbjct: 265 FCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPD 324

Query: 348 LATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFD 407
           + TYN LI G C+ G+VS+A     + L K ++P+  SY  L++ YC+ G    A     
Sbjct: 325 IVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLI 384

Query: 408 ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG 467
           E+  R   P +VTY  L+ GL   G+++VA  ++E M+ +G+ PD   Y I+++G CK  
Sbjct: 385 EMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKF 444

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
            L  A+    EML + + PD F Y T + G ++ G+  EA +L E  + KG  P ++ YN
Sbjct: 445 KLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYN 504

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
            ++ G CK G +++A   + +M      PD  TY+++I   ++  DL   + +F  M++ 
Sbjct: 505 AMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKM 564

Query: 588 GLSPTLV 594
              P ++
Sbjct: 565 KCKPNVM 571



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/460 (28%), Positives = 220/460 (47%), Gaps = 16/460 (3%)

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLW-EMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           + P+    + ++ ++   G +++ALEL +  ++     P+ +  N L+    + G +E A
Sbjct: 125 MSPTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIA 184

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
           R     M+K               G  ++G L E   L E+   +G  P +  YN LI G
Sbjct: 185 RKFTCIMVK---------------GLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDG 229

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
            CK G +  A   F E+  K  +P + +Y  ++ G+C+ G+      L  E+ SR L   
Sbjct: 230 YCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVN 289

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           V  YNT+ID   ++G +  A +  E MI  G  PD++TY  +++GSC+ G +S A +   
Sbjct: 290 VQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLE 349

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           + L KGL P++F+YT  I    K G    A     EM  +G  PDL+TY  LVHGL   G
Sbjct: 350 QALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAG 409

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            ++ A  +  KM+  G  PD   Y  ++    +   L   + L   ML + + P    Y 
Sbjct: 410 EVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYA 469

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
            L+      G L+ A   F     KG+ P ++ YNA+I G C+   +  A      M++ 
Sbjct: 470 TLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKR 529

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
            + P+++TY+ +I+      +   A ++++EM+  + +P+
Sbjct: 530 HLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPN 569



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 110/237 (46%), Gaps = 16/237 (6%)

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
           FAY++ +    +    SE   + E M  +   P     ++++      G +E+A EL   
Sbjct: 95  FAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYF 154

Query: 549 MVGD-GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
           ++    + PD I   S+++  +++G +   R  F  ++ KGL                 G
Sbjct: 155 VLKTYTYFPDVIACNSLLNMLVKLGRIEIARK-FTCIMVKGL--------------CKEG 199

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
           +LE       +   +G  PN+I YN LI+G C+   ++ A GLFI+++ +G LP   TY 
Sbjct: 200 KLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYG 259

Query: 668 ILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
            +IN  C  G+++   RL  EM  R +  +   ++ ++  +    + V AVE +E +
Sbjct: 260 AIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGM 316


>gi|14488297|gb|AAK63878.1|AC074105_7 Putative salt-inducible protein [Oryza sativa]
 gi|222612440|gb|EEE50572.1| hypothetical protein OsJ_30721 [Oryza sativa Japonica Group]
          Length = 854

 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 168/593 (28%), Positives = 260/593 (43%), Gaps = 71/593 (11%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           VF +M   G  P++   N +I  L   G    +  +  +MG F + P   +YN ++   C
Sbjct: 213 VFEEMAARGPRPNLAIFNAMIFGLCHRGLVRVSGGLLGVMGRFHVVPDACSYNILMKGHC 272

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
             G+ ++A  L  EM+  GC P  VTYN+L+    R G + +AR L  +ML+ G++V+  
Sbjct: 273 LYGQAEDAFNLFDEMRVTGCCPTIVTYNILMNELCREGRMVEARMLFDEMLQAGVEVNTI 332

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG----------------- 357
           ++N +I GY++ G +  A     EM   G+ P   T+NIL  G                 
Sbjct: 333 TFNVLIDGYAKAGQMENANMACAEMKAMGLMPDCCTFNILSAGAYKFGKAALFVLDQQQL 392

Query: 358 -------------------LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
                              LC  GR+ DA       + K V   +  +N L+  Y + G 
Sbjct: 393 HEMFGSQLSTDGIDMLICRLCWDGRLDDAWELLCSAIEKGVQVSVSGFNALIAAYSKEGF 452

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ----------- 447
             EAF L+  +    L P+  T N LI GLC  G L+ A+   E M+             
Sbjct: 453 DEEAFELYKTMNKLGLAPSSSTLNYLIMGLCNRGRLDQARLFLEYMVRMGYCVIASFTIY 512

Query: 448 -----------------------GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
                                  G+ PD + ++  VNG C++  L  A   F EM+R+GL
Sbjct: 513 LDSSFRAGDVLGALKCWDDMKIVGLQPDFVAFSAYVNGLCRLDFLDEAYNGFIEMIRRGL 572

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            P+ F Y + I+   + G+ SEA +L+++M   G  PD+ T N+L+ G C+ G L  AN 
Sbjct: 573 VPNNFTYNSLISAFCRAGNVSEALKLEQKMRQSGLVPDIFTRNILIDGFCREGGLNTANN 632

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           L   M   G  PD +TY ++++A     D+       N ML  G  P + TY + +H+  
Sbjct: 633 LFFGMYSIGLTPDVVTYNTMLNAYCRSKDINGAMIFMNKMLADGCEPDIFTYNIWMHSLC 692

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
           +   L  A M   E+      PN +TYN L++G+C    +D+A  L   + +    PN  
Sbjct: 693 SNHLLNRAMMLLDELAATDCAPNSVTYNTLMDGICS-DVLDRAMILTGRLIKLAFQPNTV 751

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHA 717
           T  IL +  C  G  + AL   +++ D     D  T + L     D +   HA
Sbjct: 752 TINILFSHFCKNGFGKRALVWAEKLRDDSFNFDDATRNILDWAYRDMEDDPHA 804



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 134/415 (32%), Positives = 209/415 (50%), Gaps = 37/415 (8%)

Query: 327 GLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISY 386
           G +  A  + EEM  RG  P LA +N +I+GLC  G V  +      M R +V+PD  SY
Sbjct: 205 GEVRAAWKVFEEMAARGPRPNLAIFNAMIFGLCHRGLVRVSGGLLGVMGRFHVVPDACSY 264

Query: 387 NTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMIN 446
           N L+ G+C  G   +AF LFDE+R     PT+VTYN L++ LCR G +  A+ L + M+ 
Sbjct: 265 NILMKGHCLYGQAEDAFNLFDEMRVTGCCPTIVTYNILMNELCREGRMVEARMLFDEMLQ 324

Query: 447 QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSE 506
            G+  + IT+ ++++G  K G +  A     EM   GL PD   +    AG  K G  + 
Sbjct: 325 AGVEVNTITFNVLIDGYAKAGQMENANMACAEMKAMGLMPDCCTFNILSAGAYKFGKAA- 383

Query: 507 AYRLQEEMLAKGFPPDLIT--YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
            + L ++ L + F   L T   ++L+  LC  G L++A ELL   +  G       + ++
Sbjct: 384 LFVLDQQQLHEMFGSQLSTDGIDMLICRLCWDGRLDDAWELLCSAIEKGVQVSVSGFNAL 443

Query: 565 IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY--------- 615
           I A  + G      +L+  M + GL+P+  T   LI     RGRL+ A ++         
Sbjct: 444 IAAYSKEGFDEEAFELYKTMNKLGLAPSSSTLNYLIMGLCNRGRLDQARLFLEYMVRMGY 503

Query: 616 -------------------------FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
                                    + +M++ G++P+ + ++A +NGLCRL  +D+AY  
Sbjct: 504 CVIASFTIYLDSSFRAGDVLGALKCWDDMKIVGLQPDFVAFSAYVNGLCRLDFLDEAYNG 563

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           FI+M   G++PN +TY  LI+  C AGN  EAL+L ++M    + PD  T + L+
Sbjct: 564 FIEMIRRGLVPNNFTYNSLISAFCRAGNVSEALKLEQKMRQSGLVPDIFTRNILI 618



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 148/488 (30%), Positives = 237/488 (48%), Gaps = 8/488 (1%)

Query: 222 GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY 281
           G + +A +V   +   G  PS+     +L    + GE++ A ++  EM  RG  PN   +
Sbjct: 170 GMADEALDVLARVRRAGDTPSLSALAALLRLLFRGGEVRAAWKVFEEMAARGPRPNLAIF 229

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
           N +I G    G +  + GL+  M +  +   A SYN ++ G+   G   +A NL +EM  
Sbjct: 230 NAMIFGLCHRGLVRVSGGLLGVMGRFHVVPDACSYNILMKGHCLYGQAEDAFNLFDEMRV 289

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
            G  PT+ TYNIL+  LC+ GR+ +AR  F EML+  V  + I++N L+ GY ++G +  
Sbjct: 290 TGCCPTIVTYNILMNELCREGRMVEARMLFDEMLQAGVEVNTITFNVLIDGYAKAGQMEN 349

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV----AQQLKENMINQGILPDVITYT 457
           A +   E+++  L+P   T+N L  G  ++G   +     QQL E M    +  D I   
Sbjct: 350 ANMACAEMKAMGLMPDCCTFNILSAGAYKFGKAALFVLDQQQLHE-MFGSQLSTDGI--D 406

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
           +++   C  G L  A E     + KG+Q     +   IA   K G   EA+ L + M   
Sbjct: 407 MLICRLCWDGRLDDAWELLCSAIEKGVQVSVSGFNALIAAYSKEGFDEEAFELYKTMNKL 466

Query: 518 GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
           G  P   T N L+ GLC  G L++A   L  MV  G+     ++T  + +S   GD+   
Sbjct: 467 GLAPSSSTLNYLIMGLCNRGRLDQARLFLEYMVRMGYCV-IASFTIYLDSSFRAGDVLGA 525

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
              +++M   GL P  V ++  ++       L+ A+  F EM  +G+ PN  TYN+LI+ 
Sbjct: 526 LKCWDDMKIVGLQPDFVAFSAYVNGLCRLDFLDEAYNGFIEMIRRGLVPNNFTYNSLISA 585

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
            CR   + +A  L   M + G++P+ +T  ILI+  C  G    A  L+  M    + PD
Sbjct: 586 FCRAGNVSEALKLEQKMRQSGLVPDIFTRNILIDGFCREGGLNTANNLFFGMYSIGLTPD 645

Query: 698 YCTHSALL 705
             T++ +L
Sbjct: 646 VVTYNTML 653



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 147/564 (26%), Positives = 248/564 (43%), Gaps = 37/564 (6%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           L L  +    M ++ L V  ++ R G  P +     ++++L   G    A +V+  M   
Sbjct: 161 LALHAFLAAGMADEALDVLARVRRAGDTPSLSALAALLRLLFRGGEVRAAWKVFEEMAAR 220

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G +P++  +N M+   C  G ++ +  LL  M      P+  +YN+L+ G    G+ E A
Sbjct: 221 GPRPNLAIFNAMIFGLCHRGLVRVSGGLLGVMGRFHVVPDACSYNILMKGHCLYGQAEDA 280

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L  +M   G   +  +YN ++     +G +VEA  L +EM+  GV     T+N+LI G
Sbjct: 281 FNLFDEMRVTGCCPTIVTYNILMNELCREGRMVEARMLFDEMLQAGVEVNTITFNVLIDG 340

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG------------------------- 392
             K G++ +A     EM    ++PD  ++N L  G                         
Sbjct: 341 YAKAGQMENANMACAEMKAMGLMPDCCTFNILSAGAYKFGKAALFVLDQQQLHEMFGSQL 400

Query: 393 -----------YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
                       C  G + +A+ L      + +  +V  +N LI    + G  E A +L 
Sbjct: 401 STDGIDMLICRLCWDGRLDDAWELLCSAIEKGVQVSVSGFNALIAAYSKEGFDEEAFELY 460

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
           + M   G+ P   T   ++ G C  G L  AR F   M+R G      ++T  +    + 
Sbjct: 461 KTMNKLGLAPSSSTLNYLIMGLCNRGRLDQARLFLEYMVRMGYCVIA-SFTIYLDSSFRA 519

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
           GD   A +  ++M   G  PD + ++  V+GLC+L  L+EA     +M+  G +P++ TY
Sbjct: 520 GDVLGALKCWDDMKIVGLQPDFVAFSAYVNGLCRLDFLDEAYNGFIEMIRRGLVPNNFTY 579

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
            S+I A    G++     L   M + GL P + T  +LI      G L  A   F  M  
Sbjct: 580 NSLISAFCRAGNVSEALKLEQKMRQSGLVPDIFTRNILIDGFCREGGLNTANNLFFGMYS 639

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
            G+ P+V+TYN ++N  CR + I+ A      M  +G  P+ +TY I ++  C+      
Sbjct: 640 IGLTPDVVTYNTMLNAYCRSKDINGAMIFMNKMLADGCEPDIFTYNIWMHSLCSNHLLNR 699

Query: 682 ALRLYKEMLDREIEPDYCTHSALL 705
           A+ L  E+   +  P+  T++ L+
Sbjct: 700 AMMLLDELAATDCAPNSVTYNTLM 723



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 169/359 (47%), Gaps = 2/359 (0%)

Query: 171 VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV 230
           VS+   + L+  Y+K+   E+   ++  M + GL P     N +I  L + G   +AR  
Sbjct: 435 VSVSGFNALIAAYSKEGFDEEAFELYKTMNKLGLAPSSSTLNYLIMGLCNRGRLDQARLF 494

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
              M   G    I ++   LDS  + G++  AL+   +M+  G  P+ V ++  + G  R
Sbjct: 495 LEYMVRMGY-CVIASFTIYLDSSFRAGDVLGALKCWDDMKIVGLQPDFVAFSAYVNGLCR 553

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
              L++A     +M++ GL  +  +YN +I  +   G + EAL LE++M   G+ P + T
Sbjct: 554 LDFLDEAYNGFIEMIRRGLVPNNFTYNSLISAFCRAGNVSEALKLEQKMRQSGLVPDIFT 613

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
            NILI G C+ G ++ A + FF M    + PD+++YNT+L  YCRS +I  A +  +++ 
Sbjct: 614 RNILIDGFCREGGLNTANNLFFGMYSIGLTPDVVTYNTMLNAYCRSKDINGAMIFMNKML 673

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
           +    P + TYN  +  LC    L  A  L + +      P+ +TY  +++G C    L 
Sbjct: 674 ADGCEPDIFTYNIWMHSLCSNHLLNRAMMLLDELAATDCAPNSVTYNTLMDGICS-DVLD 732

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
            A      +++   QP+        +   K G    A    E++    F  D  T N+L
Sbjct: 733 RAMILTGRLIKLAFQPNTVTINILFSHFCKNGFGKRALVWAEKLRDDSFNFDDATRNIL 791


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 150/429 (34%), Positives = 215/429 (50%), Gaps = 41/429 (9%)

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
            T+N ML   C  G+   ALELL +M      PN VTYN                     
Sbjct: 42  TTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNT-------------------- 77

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG-VAPTLATYNILIYGLCKWG 362
                          +I G+  +G +  AL++  EM  RG +AP   TY  +I G CK G
Sbjct: 78  ---------------VIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVG 122

Query: 363 RVSDARHRFFEMLRKN-VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           RV +A   F EML K  V P+ + YN L+ GYC  G +  A L  D +  R +  TV TY
Sbjct: 123 RVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATY 182

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           N L+  L   G    A +L E M  +G+ PDV TY I++NG CK GN+  A E F  M R
Sbjct: 183 NLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 242

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
           +G++     YT+ I    K G   E  +L +E + +G  PDL+ YN L++     G+++ 
Sbjct: 243 RGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDR 302

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A E++ +M      PD +TY +++     +G +   R L + M ++G+ P LVTY  LI 
Sbjct: 303 AFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLIS 362

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
            ++ +G ++ A    +EM  KG  P ++TYNALI GLC+  + D A  +  +M E GI P
Sbjct: 363 GYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITP 422

Query: 662 NKYTYTILI 670
           +  TY  LI
Sbjct: 423 DDSTYISLI 431



 Score =  246 bits (627), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 142/413 (34%), Positives = 221/413 (53%), Gaps = 56/413 (13%)

Query: 192 CLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLD 251
           C   FN MLR+               L   G   +A E+ R M     +P+ VTYNT++ 
Sbjct: 40  CTTTFNIMLRH---------------LCSAGKPARALELLRQMP----RPNAVTYNTVIA 80

Query: 252 SFCKEGEMQEALELLWEMQGRG-CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG-L 309
            FC  G +Q AL+++ EM+ RG  +PN  TY  +I+G+ + G +++A  +  +ML  G +
Sbjct: 81  GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 140

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
           K  A  YN +I GY ++G L  AL   + MV RGVA T+ATYN+L++ L   GR ++A  
Sbjct: 141 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 200

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
              EM  K + PD+ +YN L+ G+C+ GN+ +A  +F+ +  R +  TVVTY +LI  L 
Sbjct: 201 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALS 260

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVN---------------------------- 461
           + G ++   +L +  + +GI PD++ Y  ++N                            
Sbjct: 261 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 320

Query: 462 -------GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
                  G C +G +  AR+  +EM ++G+QPD   Y T I+G    GD  +A R++ EM
Sbjct: 321 TYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 380

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
           + KGF P L+TYN L+ GLCK G  ++A  ++++MV +G  PD  TY S+I  
Sbjct: 381 MNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 433



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 131/404 (32%), Positives = 219/404 (54%), Gaps = 10/404 (2%)

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M  L L +S  S +P++           A  L  +M    +     T+NI++  LC  G+
Sbjct: 1   MKSLSLPISTASLHPLLSALPS----APAFALFADMFRLRLPLCTTTFNIMLRHLCSAGK 56

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN-LVPTVVTYN 422
            +    R  E+LR+   P+ ++YNT++ G+C  G +  A  +  E+R R  + P   TY 
Sbjct: 57  PA----RALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYG 112

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQG-ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           T+I G C+ G ++ A ++ + M+ +G + P+ + Y  ++ G C  G L  A  + + M+ 
Sbjct: 113 TVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE 172

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
           +G+      Y   +      G  +EAY L EEM  KG  PD+ TYN+L++G CK G++++
Sbjct: 173 RGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKK 232

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A E+   M   G     +TYTS+I+A  + G ++    LF+  +R+G+ P LV Y  LI+
Sbjct: 233 ALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALIN 292

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
           +H+  G ++ AF    EM+ K I P+ +TYN L+ GLC L R+D+A  L  +M + GI P
Sbjct: 293 SHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQP 352

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +  TY  LI+     G+ ++ALR+  EM+++   P   T++AL+
Sbjct: 353 DLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALI 396



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 131/411 (31%), Positives = 206/411 (50%), Gaps = 6/411 (1%)

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  L  DM +L L +   ++N ++      G    AL L  +M      P   TYN +I 
Sbjct: 25  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 80

Query: 357 GLCKWGRVSDARHRFFEML-RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
           G C  GRV  A     EM  R  + P+  +Y T++ G+C+ G + EA  +FDE+ ++  V
Sbjct: 81  GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 140

Query: 416 -PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P  V YN LI G C  G L+ A   ++ M+ +G+   V TY ++V+     G  + A E
Sbjct: 141 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 200

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
              EM  KGL PD F Y   I G  K G+  +A  + E M  +G    ++TY  L++ L 
Sbjct: 201 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALS 260

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           K G ++E ++L  + V  G  PD + Y ++I++    G++ R  ++   M +K ++P  V
Sbjct: 261 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 320

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           TY  L+      GR++ A     EM  +GI+P+++TYN LI+G      +  A  +  +M
Sbjct: 321 TYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 380

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             +G  P   TY  LI   C  G   +A  + KEM++  I PD  T+ +L+
Sbjct: 381 MNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 431



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/353 (32%), Positives = 184/353 (52%), Gaps = 2/353 (0%)

Query: 183 YTKKSMVEQCLLVFNKML-RNGLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMGEFGIK 240
           +  +  V+  L +  +M  R G+ P+      +I      G   +A +V+  M+ +  +K
Sbjct: 82  FCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVK 141

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P  V YN ++  +C +G++  AL     M  RG +    TYN+L+     +G   +A  L
Sbjct: 142 PEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYEL 201

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           + +M   GL     +YN +I G+ ++G + +AL + E M  RGV  T+ TY  LIY L K
Sbjct: 202 VEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSK 261

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G+V +    F E +R+ + PD++ YN L+  +  SGNI  AF +  E+  + + P  VT
Sbjct: 262 KGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 321

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YNTL+ GLC  G ++ A++L + M  +GI PD++TY  +++G    G++  A    NEM+
Sbjct: 322 YNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMM 381

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
            KG  P    Y   I G  K G   +A  + +EM+  G  PD  TY  L+ GL
Sbjct: 382 NKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 434



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 76/228 (33%), Positives = 124/228 (54%)

Query: 165 GGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS 224
           GG      +   ++L+  + K+  V++ L +F  M R G+   V     +I  L   G  
Sbjct: 206 GGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQV 265

Query: 225 VKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVL 284
            +  +++      GI+P +V YN +++S    G +  A E++ EM+ +  +P+ VTYN L
Sbjct: 266 QETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTL 325

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           + G    G +++AR LI +M K G++    +YN +I GYS KG + +AL +  EM+ +G 
Sbjct: 326 MRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGF 385

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
            PTL TYN LI GLCK G+  DA +   EM+   + PD  +Y +L+ G
Sbjct: 386 NPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 433



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/180 (35%), Positives = 101/180 (56%), Gaps = 2/180 (1%)

Query: 181 LIY--TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LIY  +KK  V++   +F++ +R G+ PD+   N +I     +G   +A E+   M +  
Sbjct: 255 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 314

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           I P  VTYNT++   C  G + EA +L+ EM  RG  P+ VTYN LI+G+S  G+++ A 
Sbjct: 315 IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDAL 374

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            +  +M+  G   +  +YN +I G  + G   +A N+ +EMV  G+ P  +TY  LI GL
Sbjct: 375 RIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 434



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 58/110 (52%), Gaps = 10/110 (9%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKA--REVYRMMGEF---GIKPSI 243
           V++   + ++M + G+ PD+   N +I     +G+S+K   ++  R+  E    G  P++
Sbjct: 335 VDEARKLIDEMTKRGIQPDLVTYNTLI-----SGYSMKGDVKDALRIRNEMMNKGFNPTL 389

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           +TYN ++   CK G+  +A  ++ EM   G +P+  TY  LI G +   E
Sbjct: 390 LTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 439



 Score = 38.9 bits (89), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 37/76 (48%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y+ K  V+  L + N+M+  G  P +   N +I+ L  NG    A  + + M E GI P 
Sbjct: 364 YSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPD 423

Query: 243 IVTYNTMLDSFCKEGE 258
             TY ++++    E E
Sbjct: 424 DSTYISLIEGLTTEDE 439


>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
 gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
          Length = 475

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 139/432 (32%), Positives = 238/432 (55%), Gaps = 15/432 (3%)

Query: 277 NGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKV------SAHSYNPIICGYSEKGLLV 330
           N V +   + G  ++G++EQA    R M +           + HS    +C   + G + 
Sbjct: 10  NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELC---KAGRVD 66

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV---IPDIISYN 387
            AL+L E M+ RG  P +AT+++LI  LCK  ++ +A+  F + + + +        SYN
Sbjct: 67  SALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQ-EFLQGMNRTISTRASSCFSYN 125

Query: 388 TLLYGYCRSGNIGEAFLLFDELRS-RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMIN 446
           +LL   C++  + +AF +F  + S R++VP VV+Y+ LIDG C+  +L  A++L + MI+
Sbjct: 126 SLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMID 185

Query: 447 QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSE 506
              +P+V TY   +NG  + G ++ A+  + EM+  G  PD   Y+T I G        +
Sbjct: 186 LNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQ 245

Query: 507 AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
           A+ L E M+++G  P+ +TYN L+HGLCK    +EA+EL RKMV  G  PD +TYT++++
Sbjct: 246 AHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLY 305

Query: 567 ASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRP 626
               +G + +  ++F+ M+ KG  P +V Y  L+      G+   A   F  M  +  +P
Sbjct: 306 GFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKP 365

Query: 627 NVITYNALINGLCRLRRIDQAYGLFIDMEEE-GILPNKYTYTILINENCNAGNWQEALRL 685
           + +++N +I+GL + +R+D A  +F  ME++ G  P+  TY  LI   C      EA+++
Sbjct: 366 DTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKV 425

Query: 686 YKEMLDREIEPD 697
           +KE+   ++ PD
Sbjct: 426 FKEIDRLKLSPD 437



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 124/404 (30%), Positives = 207/404 (51%), Gaps = 6/404 (1%)

Query: 210 NCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM 269
            C+ +I+ L   G    A  +   M + G  P + T++ +++  CK  ++QEA E L  M
Sbjct: 51  TCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM 110

Query: 270 QGRGCSPNG---VTYNVLITGFSRNGELEQARGLIRDML-KLGLKVSAHSYNPIICGYSE 325
             R  S       +YN L+    +  ++ QA  +   M+ +  +     SY+ +I G+ +
Sbjct: 111 N-RTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCK 169

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
              L  A  L ++M+     P + TYN  + GL + GR++DA+  + EM+     PD+I+
Sbjct: 170 IDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVIT 229

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           Y+TL++G+  +    +A  LF+ + SR   P  VTYN L+ GLC+    + A +L   M+
Sbjct: 230 YSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMV 289

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
            +G  PD +TYT ++ G C +G +  A E F+EM+ KG  PD  AY   + G  + G   
Sbjct: 290 ERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPG 349

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD-GFIPDHITYTSI 564
           EA +L + M+++   PD +++N+++ GL K   L++A E+  +M  D G  PD +TY S+
Sbjct: 350 EARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSL 409

Query: 565 IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           I        L     +F  + R  LSP    + VL+ A  A G 
Sbjct: 410 IFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAGH 453



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/392 (30%), Positives = 187/392 (47%), Gaps = 39/392 (9%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDV-----------------------KNCNRIIKVLRDN 221
           K   V+  L +   M++ G  PD+                       +  NR I     +
Sbjct: 61  KAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASS 120

Query: 222 GFS--------VKAREVYR-------MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELL 266
            FS         KA++V++       M+ E  + P +V+Y+ ++D FCK  E+  A +L 
Sbjct: 121 CFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLY 180

Query: 267 WEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEK 326
            +M    C PN  TYN  + G  R G +  A+G+  +M+  G      +Y+ +I G+S  
Sbjct: 181 KQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLA 240

Query: 327 GLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISY 386
               +A  L E M++RG  P   TYN L++GLCK  +  +A   F +M+ +   PD ++Y
Sbjct: 241 RKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTY 300

Query: 387 NTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMIN 446
            TLLYG+C  G I +A  +FDE+ S+   P VV YN L+ G  R G    A+QL + M++
Sbjct: 301 TTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVS 360

Query: 447 QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK-GLQPDRFAYTTQIAGELKLGDTS 505
           +   PD +++ IM++G  K   L  A E F  M +  G  PD   Y + I G       S
Sbjct: 361 RECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLS 420

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           EA ++ +E+      PD   +NVL+  +   G
Sbjct: 421 EAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 125/247 (50%), Gaps = 3/247 (1%)

Query: 153 VNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCN 212
            +  G+ + +I  G S    +     L+  ++     +Q   +F  M+  G  P+    N
Sbjct: 209 ADAQGVYEEMISAGCSP--DVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYN 266

Query: 213 RIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR 272
            ++  L       +A E++R M E G  P  VTY T+L  FC  G++++A+E+  EM  +
Sbjct: 267 CLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSK 326

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA 332
           G  P+ V YN L+ GF R G+  +AR L + M+    K    S+N +I G S+   L +A
Sbjct: 327 GHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDA 386

Query: 333 LNLEEEM-VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
           + + E M    G +P L TYN LI+GLC   R+S+A   F E+ R  + PD  ++N LL 
Sbjct: 387 VEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLE 446

Query: 392 GYCRSGN 398
               +G+
Sbjct: 447 AMYAAGH 453



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 95/192 (49%), Gaps = 6/192 (3%)

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI---TYTSIIHASLEMGDLRR 576
           P + + +   + GLCK G +E+A E  R M             T  S+I    + G +  
Sbjct: 8   PLNNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDS 67

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ--VKGIRPNVITYNAL 634
              L   M+++G  P + T+++LI+      +++ A  +   M   +     +  +YN+L
Sbjct: 68  ALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSL 127

Query: 635 INGLCRLRRIDQAYGLFIDM-EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
           +N LC+ +++ QA+ +F  M  E  ++P+  +Y+ILI+  C       A +LYK+M+D  
Sbjct: 128 LNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLN 187

Query: 694 IEPDYCTHSALL 705
             P+  T++A L
Sbjct: 188 CVPNVTTYNAFL 199



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 51/110 (46%), Gaps = 4/110 (3%)

Query: 619 MQVKGIRP-NVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY---TYTILINENC 674
           M V+   P N + + A + GLC+  +I+QA+     M+E           T   +I E C
Sbjct: 1   MAVESKAPLNNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELC 60

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
            AG    AL L + M+ R   PD  THS L+ +    D    A E+L+ +
Sbjct: 61  KAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM 110


>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Cucumis sativus]
          Length = 606

 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 165/548 (30%), Positives = 281/548 (51%), Gaps = 6/548 (1%)

Query: 161 VLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRD 220
           VL    L +   ++  D L    ++K  +   L++F+++ R     ++KN  + I V   
Sbjct: 40  VLSDPNLPTRSCLRFFDFLRQNPSRKPDLPAHLILFSRLYRARKFAEMKNVLKFI-VNDG 98

Query: 221 NGFSVKAREVYRMMGEFGIKPSIV-TYNTMLDSFCKEGEM-QEALELLWEMQGRGCSPNG 278
           N +S   R V  + GEF  +PSIV  +  ML     +  M   +LE+    + +G   + 
Sbjct: 99  NLWSNVERIVSSIGGEFN-EPSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDE 157

Query: 279 VTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
            +    +    R+G +E     +R M+  G+++   S+  ++ G  +KG +V A  L +E
Sbjct: 158 RSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDE 217

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP-DIISYNTLLYGYCRSG 397
           +V +G  P++ TYN L+ G  +   V    +    ++ KNV+  ++ +Y  L+  Y RS 
Sbjct: 218 LVCKGFKPSVITYNTLLNGYIEIKDVGGV-NEILSLMEKNVVDYNVTTYTMLIEWYSRSS 276

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
            I EA  LFDE+  + + P V  Y ++I+  C++G+++ A  L + M  + ++P+  TY 
Sbjct: 277 KIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYG 336

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
            ++NG+CK G +  A    N+M  KG+  +R  + T + G  K G   EA RLQ  M  K
Sbjct: 337 ALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQK 396

Query: 518 GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
           GF  D  T N++  G C+    EEA  LL  M   G  P+ ++++ +I    +  +    
Sbjct: 397 GFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEA 456

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
           R LF  M +KG +P++VTY   I  +  +G++E A+   +EMQ +G+ P+  TY +LI+G
Sbjct: 457 RRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDG 516

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
                 +D+A  LF +M + G+  N  TYT++I+     G   EA +LY EM    I PD
Sbjct: 517 ERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPD 576

Query: 698 YCTHSALL 705
              +S+L+
Sbjct: 577 DGIYSSLI 584



 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 160/563 (28%), Positives = 278/563 (49%), Gaps = 15/563 (2%)

Query: 84  QAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSA 143
           Q V+SDP L            R  LRFF ++   P  K D      +   L  +      
Sbjct: 38  QLVLSDPNL----------PTRSCLRFFDFLRQNPSRKPDLPAHLILFSRLYRARKFAEM 87

Query: 144 YWVVETVV-----CVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNK 198
             V++ +V       N+  I+  + G      +  K  D+L  +Y    M +  L VF+ 
Sbjct: 88  KNVLKFIVNDGNLWSNVERIVSSIGGEFNEPSIVEKFCDMLFRVYMDNRMFDSSLEVFDY 147

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
             + G   D ++C   +  L+ +G      E  R M + GI+  + ++  ++D  CK+GE
Sbjct: 148 ARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGE 207

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           +  A  L+ E+  +G  P+ +TYN L+ G+    ++     ++  M K  +  +  +Y  
Sbjct: 208 VVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTM 267

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           +I  YS    + EA  L +EM+ +G+ P +  Y  +I   CK+G +  A   F EM  + 
Sbjct: 268 LIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERR 327

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
           ++P+  +Y  L+ G C++G +  A ++ ++++S+ +    V +NTL+DG C+ G ++ A 
Sbjct: 328 LVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEAL 387

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
           +L+  M  +G   D  T  I+ +G C+      A+     M  +G+ P+  +++  I   
Sbjct: 388 RLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIY 447

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
            K  + +EA RL + M  KG  P ++TYN  +   CK G +EEA +L+ +M   G +PD 
Sbjct: 448 CKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDT 507

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
            TYTS+I      G++ R  +LFN M + GL+  +VTYTV+I   +  GR + AF  + E
Sbjct: 508 YTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDE 567

Query: 619 MQVKGIRPNVITYNALINGLCRL 641
           M  +GI P+   Y++LI  L ++
Sbjct: 568 MNKEGIVPDDGIYSSLIASLHKV 590



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 109/314 (34%), Positives = 172/314 (54%)

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           +A +++  M + GI+P +  Y ++++  CK G M+ A  L  EM  R   PN  TY  LI
Sbjct: 280 EAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALI 339

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            G  + GE++ A  ++ DM   G+ V+   +N ++ GY +KG++ EAL L+  M  +G  
Sbjct: 340 NGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFE 399

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
               T NI+  G C+  R  +A+     M  + V P+++S++ L+  YC+  N  EA  L
Sbjct: 400 IDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRL 459

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
           F  +  +   P+VVTYN  I+  C+ G +E A +L   M  +G++PD  TYT +++G   
Sbjct: 460 FKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERA 519

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
            GN+  A E FNEM + GL  +   YT  I+G  K G   EA++L +EM  +G  PD   
Sbjct: 520 SGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGI 579

Query: 526 YNVLVHGLCKLGSL 539
           Y+ L+  L K+G L
Sbjct: 580 YSSLIASLHKVGPL 593



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 98/229 (42%), Gaps = 70/229 (30%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCN----------------RIIKVL 218
           I + L+  Y KK M+++ L + N M + G   D   CN                R++  +
Sbjct: 369 IFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTM 428

Query: 219 RDNG-------FSV------------KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEM 259
            + G       FS+            +AR ++++M + G  PS+VTYN  ++ +CK+G+M
Sbjct: 429 EERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKM 488

Query: 260 QEALELLWEMQGRGCSP-----------------------------------NGVTYNVL 284
           +EA +L+ EMQ RG  P                                   N VTY V+
Sbjct: 489 EEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVI 548

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
           I+G S++G  ++A  L  +M K G+      Y+ +I    + G LV  L
Sbjct: 549 ISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSGL 597


>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
 gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
          Length = 439

 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 144/424 (33%), Positives = 226/424 (53%), Gaps = 9/424 (2%)

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           +A E Y  M E    P++   N +L S C+ G+M +A+ +   +Q   CSP+ +T N+LI
Sbjct: 21  EAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAIFRGIQ---CSPSVITLNILI 77

Query: 286 TGFSRNGELEQARGLIRDMLK-LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
            GF     L++A  L  +M K   L   A +Y  II  Y +   L +A  L EE  +   
Sbjct: 78  NGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQLLEE--SSCC 135

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEML-RKNVIPDIISYNTLLYGYCRSGNIGEAF 403
           +  +     +  G CK  RV +A     +M+ +K+  PDI+++N +++G+C++G + EA+
Sbjct: 136 SSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAY 195

Query: 404 LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG--ILPDVITYTIMVN 461
            + + L S   VP  VTY TLIDG C+ G+L  A QL + + ++     P+V+T+  +++
Sbjct: 196 EMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALIS 255

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
           G CK   L  A E   +M  + L+ D F YTT + G  K G TSE  R+ EEML +G  P
Sbjct: 256 GLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNP 315

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
            ++TY  LVH  CK GSL++A +++R MV  G  PD  TYT ++    E G +R   + F
Sbjct: 316 SVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFF 375

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
             +LR+   P  V Y+ L+        ++ A  Y+ EM  + + P+  T   L+  LC+ 
Sbjct: 376 EKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKR 435

Query: 642 RRID 645
            R D
Sbjct: 436 GRTD 439



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 128/443 (28%), Positives = 230/443 (51%), Gaps = 13/443 (2%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P+  T++ ++   CK G + EA+E   +M  R C PN    N+L+    + G+++QA  +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60

Query: 301 IRDMLKLGLKVSAH--SYNPIICGYSEKGLLVEALNLEEEMVTR-GVAPTLATYNILIYG 357
            R     G++ S    + N +I G+ E  LL +AL L  EM     + P   TY  +I  
Sbjct: 61  FR-----GIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKC 115

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF-LLFDELRSRNLVP 416
            CK  R+  AR    E        D+I+  ++  G+C++  + EA+ LL D +  ++  P
Sbjct: 116 YCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKP 173

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
            +V +N +I G C+ G +  A ++ E +++ G +P+ +TYT +++G CK GNLS A + F
Sbjct: 174 DIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLF 233

Query: 477 NEMLRKG--LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
             +  +    +P+   +   I+G  K      A+ L ++M A+    D  TY  L+ GLC
Sbjct: 234 KVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLC 293

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           K G   E + +  +M+ +G  P  +TYT+++HA  + G L+  + +  +M+ KG+ P + 
Sbjct: 294 KQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVT 353

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           TYTVL+      G++  A  +F ++  +   P  + Y+AL+ G C+   +D+A   +++M
Sbjct: 354 TYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEM 413

Query: 655 EEEGILPNKYTYTILINENCNAG 677
            +  + P+  T  +L+   C  G
Sbjct: 414 LDRRLAPDPATCKLLVEMLCKRG 436



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 132/421 (31%), Positives = 218/421 (51%), Gaps = 13/421 (3%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIK--PSIVTYNTMLDSF 253
           +N+ML    +P++++ N ++  L   G   +A  ++R     GI+  PS++T N +++ F
Sbjct: 26  YNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAIFR-----GIQCSPSVITLNILINGF 80

Query: 254 CKEGEMQEALELLWEMQGR-GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
           C+   + +ALEL  EM+      P   TY  +I  + +   L+QAR L+ +       V 
Sbjct: 81  CELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQLLEESSCCSSDVI 140

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA-PTLATYNILIYGLCKWGRVSDARHRF 371
           A     +  G+ +   + EA  L  +MV +  A P +  +N++I+G CK GRV +A    
Sbjct: 141 A--ITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEML 198

Query: 372 FEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN--LVPTVVTYNTLIDGLC 429
             ++    +P+ ++Y TL+ G+C+SGN+ EA  LF  L SR+    P VVT+N LI GLC
Sbjct: 199 ETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLC 258

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
           +   LE A +L + M  + +  D  TYT +++G CK G  S     F EMLR+G  P   
Sbjct: 259 KADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVV 318

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
            YTT +    K G   +A ++   M+AKG PPD+ TY VL+ GL + G +  A E   K+
Sbjct: 319 TYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKI 378

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRL 609
           + +   P  + Y++++    +   +      +  ML + L+P   T  +L+     RGR 
Sbjct: 379 LRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGRT 438

Query: 610 E 610
           +
Sbjct: 439 D 439



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 124/383 (32%), Positives = 202/383 (52%), Gaps = 9/383 (2%)

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P   T+++LI GLCK GR+ +A   + +ML ++ +P++   N LL   C++G + +A  +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM-INQGILPDVITYTIMVNGSC 464
           F   R     P+V+T N LI+G C    L+ A +L   M  N  ++P+  TYT ++   C
Sbjct: 61  F---RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML-AKGFPPDL 523
           KM  L  AR+   E        D  A T+   G  K     EAY+L  +M+  K   PD+
Sbjct: 118 KMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDI 175

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
           + +NV++HG CK G + EA E+L  +V  G +P+ +TYT++I    + G+L     LF  
Sbjct: 176 VAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKV 235

Query: 584 MLRKG--LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
           +  +     P +VT+  LI       RLE AF    +M+ + +R +  TY  L++GLC+ 
Sbjct: 236 LSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQ 295

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
            R  +   +F +M  EG  P+  TYT L++ +C AG+ Q+A ++ + M+ + I PD  T+
Sbjct: 296 GRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTY 355

Query: 702 SALLLKQLDKDYKVHAVEYLESL 724
           + LL    +      A E+ E +
Sbjct: 356 TVLLEGLFENGKVRTATEFFEKI 378



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 149/305 (48%), Gaps = 5/305 (1%)

Query: 168 SSCVSIKILDLLLLI--YTKKSMVEQCL-LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS 224
           SSC S  ++ +  +   + K   V++   L+ + + +    PD+   N II      G  
Sbjct: 132 SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRV 191

Query: 225 VKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG--CSPNGVTYN 282
            +A E+   +   G  P+ VTY T++D FCK G + EAL+L   +  R     PN VT+N
Sbjct: 192 REAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFN 251

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
            LI+G  +   LE A  L++ M    L+    +Y  ++ G  ++G   E   + EEM+  
Sbjct: 252 ALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLRE 311

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           G  P++ TY  L++  CK G + DA+     M+ K + PD+ +Y  LL G   +G +  A
Sbjct: 312 GCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTA 371

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
              F+++      P  V Y+ L+ G C+   ++ A +    M+++ + PD  T  ++V  
Sbjct: 372 TEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEM 431

Query: 463 SCKMG 467
            CK G
Sbjct: 432 LCKRG 436



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 139/319 (43%), Gaps = 53/319 (16%)

Query: 117 QPGVKRDEFVFCTILEILIESGLLRSAYWVVETVV---CVNMHGILDVLIGGGLSSCVSI 173
           +   K D   +  I+    ++G +R AY ++ET+V   CV        LI G   S    
Sbjct: 168 KKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLS 227

Query: 174 KILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRM 233
           + L L  ++ ++    E  ++ FN ++ +GL       +R+     ++ F     E+ + 
Sbjct: 228 EALQLFKVLSSRDHHAEPNVVTFNALI-SGLC----KADRL-----EHAF-----ELVKQ 272

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M    ++    TY T++D  CK+G   E   +  EM   GC+P+ VTY  L+    + G 
Sbjct: 273 MKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGS 332

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           L+ A+ +IR M                                   V +G+ P + TY +
Sbjct: 333 LQDAQQVIRSM-----------------------------------VAKGIPPDVTTYTV 357

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           L+ GL + G+V  A   F ++LR+   P  + Y+ L+ G C++  + EA   + E+  R 
Sbjct: 358 LLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRR 417

Query: 414 LVPTVVTYNTLIDGLCRYG 432
           L P   T   L++ LC+ G
Sbjct: 418 LAPDPATCKLLVEMLCKRG 436



 Score = 42.4 bits (98), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 28/124 (22%), Positives = 53/124 (42%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           S+     L+  + K   ++    V   M+  G+ PDV     +++ L +NG    A E +
Sbjct: 316 SVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFF 375

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             +      P  V Y+ ++   CK   + EA++   EM  R  +P+  T  +L+    + 
Sbjct: 376 EKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKR 435

Query: 292 GELE 295
           G  +
Sbjct: 436 GRTD 439


>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like, partial [Cucumis sativus]
          Length = 602

 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 165/548 (30%), Positives = 281/548 (51%), Gaps = 6/548 (1%)

Query: 161 VLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRD 220
           VL    L +   ++  D L    ++K  +   L++F+++ R     ++KN  + I V   
Sbjct: 36  VLSDPNLPTRSCLRFFDFLRQNPSRKPDLPAHLILFSRLYRARKFAEMKNVLKFI-VNDG 94

Query: 221 NGFSVKAREVYRMMGEFGIKPSIV-TYNTMLDSFCKEGEM-QEALELLWEMQGRGCSPNG 278
           N +S   R V  + GEF  +PSIV  +  ML     +  M   +LE+    + +G   + 
Sbjct: 95  NLWSNVERIVSSIGGEFN-EPSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDE 153

Query: 279 VTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
            +    +    R+G +E     +R M+  G+++   S+  ++ G  +KG +V A  L +E
Sbjct: 154 RSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDE 213

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP-DIISYNTLLYGYCRSG 397
           +V +G  P++ TYN L+ G  +   V    +    ++ KNV+  ++ +Y  L+  Y RS 
Sbjct: 214 LVCKGFKPSVITYNTLLNGYIEIKDVGGV-NEILSLMEKNVVDYNVTTYTMLIEWYSRSS 272

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
            I EA  LFDE+  + + P V  Y ++I+  C++G+++ A  L + M  + ++P+  TY 
Sbjct: 273 KIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYG 332

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
            ++NG+CK G +  A    N+M  KG+  +R  + T + G  K G   EA RLQ  M  K
Sbjct: 333 ALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQK 392

Query: 518 GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
           GF  D  T N++  G C+    EEA  LL  M   G  P+ ++++ +I    +  +    
Sbjct: 393 GFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEA 452

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
           R LF  M +KG +P++VTY   I  +  +G++E A+   +EMQ +G+ P+  TY +LI+G
Sbjct: 453 RRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDG 512

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
                 +D+A  LF +M + G+  N  TYT++I+     G   EA +LY EM    I PD
Sbjct: 513 ERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPD 572

Query: 698 YCTHSALL 705
              +S+L+
Sbjct: 573 DGIYSSLI 580



 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 160/563 (28%), Positives = 278/563 (49%), Gaps = 15/563 (2%)

Query: 84  QAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSA 143
           Q V+SDP L            R  LRFF ++   P  K D      +   L  +      
Sbjct: 34  QLVLSDPNL----------PTRSCLRFFDFLRQNPSRKPDLPAHLILFSRLYRARKFAEM 83

Query: 144 YWVVETVV-----CVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNK 198
             V++ +V       N+  I+  + G      +  K  D+L  +Y    M +  L VF+ 
Sbjct: 84  KNVLKFIVNDGNLWSNVERIVSSIGGEFNEPSIVEKFCDMLFRVYMDNRMFDSSLEVFDY 143

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
             + G   D ++C   +  L+ +G      E  R M + GI+  + ++  ++D  CK+GE
Sbjct: 144 ARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGE 203

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           +  A  L+ E+  +G  P+ +TYN L+ G+    ++     ++  M K  +  +  +Y  
Sbjct: 204 VVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTM 263

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           +I  YS    + EA  L +EM+ +G+ P +  Y  +I   CK+G +  A   F EM  + 
Sbjct: 264 LIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERR 323

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
           ++P+  +Y  L+ G C++G +  A ++ ++++S+ +    V +NTL+DG C+ G ++ A 
Sbjct: 324 LVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEAL 383

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
           +L+  M  +G   D  T  I+ +G C+      A+     M  +G+ P+  +++  I   
Sbjct: 384 RLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIY 443

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
            K  + +EA RL + M  KG  P ++TYN  +   CK G +EEA +L+ +M   G +PD 
Sbjct: 444 CKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDT 503

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
            TYTS+I      G++ R  +LFN M + GL+  +VTYTV+I   +  GR + AF  + E
Sbjct: 504 YTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDE 563

Query: 619 MQVKGIRPNVITYNALINGLCRL 641
           M  +GI P+   Y++LI  L ++
Sbjct: 564 MNKEGIVPDDGIYSSLIASLHKV 586



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 109/314 (34%), Positives = 172/314 (54%)

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           +A +++  M + GI+P +  Y ++++  CK G M+ A  L  EM  R   PN  TY  LI
Sbjct: 276 EAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALI 335

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            G  + GE++ A  ++ DM   G+ V+   +N ++ GY +KG++ EAL L+  M  +G  
Sbjct: 336 NGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFE 395

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
               T NI+  G C+  R  +A+     M  + V P+++S++ L+  YC+  N  EA  L
Sbjct: 396 IDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRL 455

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
           F  +  +   P+VVTYN  I+  C+ G +E A +L   M  +G++PD  TYT +++G   
Sbjct: 456 FKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERA 515

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
            GN+  A E FNEM + GL  +   YT  I+G  K G   EA++L +EM  +G  PD   
Sbjct: 516 SGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGI 575

Query: 526 YNVLVHGLCKLGSL 539
           Y+ L+  L K+G L
Sbjct: 576 YSSLIASLHKVGPL 589



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 98/229 (42%), Gaps = 70/229 (30%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCN----------------RIIKVL 218
           I + L+  Y KK M+++ L + N M + G   D   CN                R++  +
Sbjct: 365 IFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTM 424

Query: 219 RDNG-------FSV------------KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEM 259
            + G       FS+            +AR ++++M + G  PS+VTYN  ++ +CK+G+M
Sbjct: 425 EERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKM 484

Query: 260 QEALELLWEMQGRGCSP-----------------------------------NGVTYNVL 284
           +EA +L+ EMQ RG  P                                   N VTY V+
Sbjct: 485 EEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVI 544

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
           I+G S++G  ++A  L  +M K G+      Y+ +I    + G LV  L
Sbjct: 545 ISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSGL 593


>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 732

 Score =  248 bits (634), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 158/545 (28%), Positives = 260/545 (47%), Gaps = 25/545 (4%)

Query: 93  LVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVC 152
           L+  L R  E   I+ R F  +E     K    VF  ++   +E GL   A WV   + C
Sbjct: 135 LIERLRRYSEPTNISHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEDALWVSREMRC 194

Query: 153 VNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCN 212
                           S   + IL+ L+    ++   +   + +  M+  GL+PDV   +
Sbjct: 195 -------------SPDSKACLAILNGLV----RRRRFDSVWVDYQLMISRGLVPDVHIYS 237

Query: 213 RIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR 272
            + +     GF  K  ++   M   G+KP++  Y   +   C+E +M+EA ++   M+  
Sbjct: 238 VLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIH 297

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA 332
           G  PN  TY+ +I G+ + G L QA GL +++L   L  +   +  ++ G+ +   LV A
Sbjct: 298 GVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAA 357

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
            +L   MV  GV P L  YN LI+G CK G + +A     EM   N+ PD+ +Y  L+ G
Sbjct: 358 RSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILING 417

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
            C    + EA  LF  +++  + P+ VTYN+LI G C+  ++E A  L   M + G+ P+
Sbjct: 418 LCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPN 477

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
           +IT++ +++G CK+ N+  A   + EM  KG+ PD   YTT I    K  +  EA RL  
Sbjct: 478 IITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYS 537

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL----RKMVGDGFIP----DHITYTSI 564
           +ML  G  P+  T+  LV G  K G L +A +      +   G   +      ++ +T +
Sbjct: 538 DMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCL 597

Query: 565 IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
           I    + G + R    F++M   G++P + +Y  ++ AH    R+    M   +M   GI
Sbjct: 598 IEGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHLREKRITDTMMLHCDMIKTGI 657

Query: 625 RPNVI 629
            PN++
Sbjct: 658 LPNLM 662



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 151/500 (30%), Positives = 247/500 (49%), Gaps = 13/500 (2%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK-VLRDNGFSVKAREV 230
           SI +  LL++ + +  + E  L V  +M  +   PD K C  I+  ++R   F     + 
Sbjct: 165 SIGVFSLLIMEFLEMGLFEDALWVSREMRCS---PDSKACLAILNGLVRRRRFDSVWVD- 220

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
           Y++M   G+ P +  Y+ +     K+G   +  +LL EM   G  PN   Y + I    R
Sbjct: 221 YQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCR 280

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
             ++E+A  +   M   G+  + ++Y+ +I GY + G L +A  L +E++   + P +  
Sbjct: 281 ENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVV 340

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           +  L+ G CK   +  AR  F  M++  V P++  YN L++G C+SGN+ EA  L  E+ 
Sbjct: 341 FGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEME 400

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
           S NL P V TY  LI+GLC    L  A +L + M N+ I P  +TY  +++G CK  N+ 
Sbjct: 401 SLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIE 460

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            A +  +EM   G++P+   ++T I G  K+ +   A  L  EM  KG  PD++TY  L+
Sbjct: 461 KALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLI 520

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF--NNMLRKG 588
               K  +++EA  L   M+  G  P+  T+  ++    + G L    D +  NN    G
Sbjct: 521 DAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAATG 580

Query: 589 LSPT------LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
            S         V +T LI      G +  A  +FS+M+  G+ P++ +Y +++    R +
Sbjct: 581 KSIVQRSCWKYVGFTCLIEGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHLREK 640

Query: 643 RIDQAYGLFIDMEEEGILPN 662
           RI     L  DM + GILPN
Sbjct: 641 RITDTMMLHCDMIKTGILPN 660



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 139/478 (29%), Positives = 241/478 (50%), Gaps = 11/478 (2%)

Query: 240 KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
           K SI  ++ ++  F + G  ++AL +  EM+   CSP+      ++ G  R    +    
Sbjct: 163 KFSIGVFSLLIMEFLEMGLFEDALWVSREMR---CSPDSKACLAILNGLVRRRRFDSVWV 219

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
             + M+  GL    H Y+ +     ++G   +   L +EM + GV P +  Y I I  LC
Sbjct: 220 DYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLC 279

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
           +  ++ +A   F  M    V+P++ +Y+ ++ GYC++GN+ +A+ L+ E+    L+P VV
Sbjct: 280 RENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVV 339

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
            + TL+DG C+  +L  A+ L  +M+  G+ P++  Y  +++G CK GN+  A    +EM
Sbjct: 340 VFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEM 399

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
               L PD F YT  I G       +EA RL + M  +   P  +TYN L+HG CK  ++
Sbjct: 400 ESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNI 459

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           E+A +L  +M   G  P+ IT++++I    ++ +++    L+  M  KG+ P +VTYT L
Sbjct: 460 EKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTL 519

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           I AH     ++ A   +S+M   GI PN  T+  L++G  +  R+  A   +++  +   
Sbjct: 520 IDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAAT 579

Query: 660 LPN-------KYT-YTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQL 709
             +       KY  +T LI   C  G    A R + +M    + PD  ++ ++L   L
Sbjct: 580 GKSIVQRSCWKYVGFTCLIEGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHL 637



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 180/368 (48%), Gaps = 8/368 (2%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K   + Q   ++ ++L   LLP+V     ++         V AR ++  M +FG+ P+
Sbjct: 313 YCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPN 372

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +  YN ++   CK G M EA+ LL EM+    SP+  TY +LI G      L +A  L +
Sbjct: 373 LYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQ 432

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M    +  S+ +YN +I G+ ++  + +AL+L  EM + GV P + T++ LI G CK  
Sbjct: 433 RMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVR 492

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            +  A   +FEM  K ++PD+++Y TL+  + +  N+ EA  L+ ++    + P   T+ 
Sbjct: 493 NIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFA 552

Query: 423 TLIDGLCRYGDLEVA--------QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            L+DG  + G L  A        Q      I Q      + +T ++ G C+ G +  A  
Sbjct: 553 CLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIEGLCQNGYILRASR 612

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
           FF++M   G+ PD ++Y + +   L+    ++   L  +M+  G  P+L+   +L     
Sbjct: 613 FFSDMKSGGVTPDIWSYVSMLKAHLREKRITDTMMLHCDMIKTGILPNLMVNQLLAMFYQ 672

Query: 535 KLGSLEEA 542
           + G L  A
Sbjct: 673 ENGYLRSA 680



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 43/274 (15%)

Query: 470 SMAREFFNEMLRKGLQPDRFA---YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           +++   FN +  + +Q  +F+   ++  I   L++G   +A  +  EM      PD    
Sbjct: 147 NISHRLFNAL--EDIQSPKFSIGVFSLLIMEFLEMGLFEDALWVSREMRCS---PDSKAC 201

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
             +++GL +    +      + M+  G +PD   Y+ +     + G   +   L + M  
Sbjct: 202 LAILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTS 261

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
            G+ P +  YT+ I       ++E A   F  M++ G+ PN+ TY+A+I+G C+   + Q
Sbjct: 262 LGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQ 321

Query: 647 AYG-----------------------------------LFIDMEEEGILPNKYTYTILIN 671
           AYG                                   LF+ M + G+ PN Y Y  LI+
Sbjct: 322 AYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIH 381

Query: 672 ENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             C +GN  EA+ L  EM    + PD  T++ L+
Sbjct: 382 GQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILI 415


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 160/505 (31%), Positives = 252/505 (49%), Gaps = 18/505 (3%)

Query: 201 RNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGI---KPSIVTYNTMLDSFCKEG 257
           R G   +   CN +++V  ++G     RE YR+  +  +   +P   TY T++  FCK  
Sbjct: 10  RPGFQHNTYTCNSLLEVFVNDGCH---REAYRVFKDELVTLFRPDDFTYGTLIRGFCKAE 66

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
           ++ +A+ LL EM+  G +P  VT+  LI         ++A  +   M+ + +K  A  Y 
Sbjct: 67  QIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYT 126

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL---CKWGRVSDARHRFFE- 373
            +I    +   L  A +  E MV  G  P   TY +L++ L   CKW    +  H+ FE 
Sbjct: 127 VVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKW----EQGHQIFEE 182

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           ML K   P++++Y T++ GYC++G I +A  L   L+     P+   Y+TLIDGLC++  
Sbjct: 183 MLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDR 242

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
            + A++L E  +  G + DVI YT  ++G CK G L  A+    +M+  G  PD  +Y  
Sbjct: 243 HDEARELFE--MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNV 300

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            I    K    SEA  L ++ + +   P +    VLV GLCK   +EEA  +L +M+  G
Sbjct: 301 IIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETG 360

Query: 554 -FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
              P  +TY+++I    +   L     +   M R G  P +VTYT +I A    GRL+ A
Sbjct: 361 DRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEA 420

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
              F  M  +G   +V+ YN LI G CR  ++D+A  +  +M   GI PN  + + +++ 
Sbjct: 421 RELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDG 480

Query: 673 NCNAGNWQEALRLYKEMLDREIEPD 697
            C     +EA RL  E ++ E  PD
Sbjct: 481 LCKESRVEEA-RLLMEKMNFESLPD 504



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 234/469 (49%), Gaps = 3/469 (0%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G + +  T N++L+ F  +G  +EA  +  +       P+  TY  LI GF +  ++ QA
Sbjct: 12  GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L+ +M   G+  +  ++  +I    E     +AL +  +M+   V P    Y ++I  
Sbjct: 72  VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGH 131

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           LCK  ++  A   F  M++   +PD ++Y  L++   ++    +   +F+E+ S+   P 
Sbjct: 132 LCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPE 191

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           +VTY T+++G C+ G ++ A  L   +   G  P    Y+ +++G CK      ARE F 
Sbjct: 192 LVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELF- 250

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           EM    +Q D   YT+ I+G  K G   EA  +  +M+  G  PD ++YNV+++ LCK  
Sbjct: 251 EMAAGDVQ-DVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDN 309

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG-LSPTLVTY 596
            + EA EL+ + +    +P     T ++    +   +     +   ML  G  +P++VTY
Sbjct: 310 RVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTY 369

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
           + +I       RL+ A++   +M+  G  P+V+TY A+I+  C++ R+D+A  LF  M E
Sbjct: 370 SAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHE 429

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            G   +   Y ILI   C A    EA+ + +EM  R I+P+  + S ++
Sbjct: 430 RGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIV 478



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 132/516 (25%), Positives = 239/516 (46%), Gaps = 17/516 (3%)

Query: 110 FFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSS 169
           FF+W + +PG + + +   ++LE+ +  G  R AY V +  + V +    D   G     
Sbjct: 3   FFQWAKARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDEL-VTLFRPDDFTYG----- 56

Query: 170 CVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE 229
                    L+  + K   + Q + +  +M   G+ P +     +I+ L +  F+ KA +
Sbjct: 57  --------TLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQ 108

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           ++  M +  +KP    Y  ++   CK  ++  A      M   GC P+ VTY VL+    
Sbjct: 109 IFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLF 168

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           +  + EQ   +  +ML  G      +Y  ++ GY + G + +AL+L   +   G +P+ +
Sbjct: 169 KACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGS 228

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
            Y+ LI GLCK  R  +AR   FEM   +V  D+I Y + + G C++G + EA  +  ++
Sbjct: 229 LYSTLIDGLCKHDRHDEARE-LFEMAAGDV-QDVIVYTSFISGLCKAGKLDEAKAVHVKM 286

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
                 P  V+YN +I  LC+   +  A++L +  + +  +P V   T++V+G CK   +
Sbjct: 287 IEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRV 346

Query: 470 SMAREFFNEMLRKGLQ-PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
             A      ML  G + P    Y+  I G  K     +AY + ++M   G  PD++TY  
Sbjct: 347 EEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTA 406

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           ++   CK+G L+EA EL ++M   G   D + Y  +I        +     +   M  +G
Sbjct: 407 IIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRG 466

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
           + P +V+ + ++       R+E A +   +M  + +
Sbjct: 467 IQPNVVSLSTIVDGLCKESRVEEARLLMEKMNFESL 502



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/440 (29%), Positives = 208/440 (47%), Gaps = 3/440 (0%)

Query: 267 WEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEK 326
           W     G   N  T N L+  F  +G   +A  + +D L    +    +Y  +I G+ + 
Sbjct: 6   WAKARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKA 65

Query: 327 GLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISY 386
             + +A+NL  EM   G+ PT+ T+  LI  LC+      A   F +M+   V PD   Y
Sbjct: 66  EQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLY 125

Query: 387 NTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMIN 446
             ++   C+   +  A   F+ +     +P  VTY  L+  L +    E   Q+ E M++
Sbjct: 126 TVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLS 185

Query: 447 QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSE 506
           +G  P+++TY  +VNG CK G +  A      +   G  P    Y+T I G  K     E
Sbjct: 186 KGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDE 245

Query: 507 AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
           A  L E  +A G   D+I Y   + GLCK G L+EA  +  KM+  G  PD ++Y  II+
Sbjct: 246 ARELFE--MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIY 303

Query: 567 ASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR- 625
           +  +   +   ++L +  + +   P +   TVL+       R+E A +    M   G R 
Sbjct: 304 SLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRA 363

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           P+V+TY+A+I+GLC+  R+D AY +   M   G +P+  TYT +I+  C  G   EA  L
Sbjct: 364 PSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEAREL 423

Query: 686 YKEMLDREIEPDYCTHSALL 705
           ++ M +R    D   ++ L+
Sbjct: 424 FQRMHERGCALDVVAYNILI 443



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 136/271 (50%), Gaps = 3/271 (1%)

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
           PD  TY  ++ G CK   +  A     EM   G+ P    + + I    +L  T +A ++
Sbjct: 50  PDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQI 109

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
             +M+     PD   Y V++  LCK+  L+ A     +MV  G +PD +TYT ++H+  +
Sbjct: 110 FHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFK 169

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
                +G  +F  ML KG SP LVTY  +++ +   GR++ A      ++  G  P+   
Sbjct: 170 ACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSL 229

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           Y+ LI+GLC+  R D+A  LF +M   G + +   YT  I+  C AG   EA  ++ +M+
Sbjct: 230 YSTLIDGLCKHDRHDEARELF-EM-AAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMI 287

Query: 691 DREIEPDYCTHSALLLKQLDKDYKVHAVEYL 721
           +    PD  +++ +++  L KD +V   + L
Sbjct: 288 EAGCAPDPVSYN-VIIYSLCKDNRVSEAKEL 317


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 182/688 (26%), Positives = 313/688 (45%), Gaps = 95/688 (13%)

Query: 113  WVETQP-GVKRDEFVFCTILEILIESGLLRSAYWVVETV----VCVNMHGILDVLIGGGL 167
            W E +  G   D   F  ++  L ++G +  A+ +++T+    V  N+H   + LI G L
Sbjct: 357  WTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLH-TYNTLISGLL 415

Query: 168  SSCVSIKILDL-----------------LLLIYTKKS-MVEQCLLVFNKMLRNGLLPDVK 209
             +      LDL                 LL+ Y  KS    + L  F KM   G+ P++ 
Sbjct: 416  RANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIV 475

Query: 210  NCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM 269
             CN  +  L + G   +A+ ++  +   G+ P  VTYN M+  + K G++ EA++LL EM
Sbjct: 476  ACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEM 535

Query: 270  QGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLL 329
                C P+ +  N LI    + G +E+A  +   M ++ L  +  +YN ++ G  ++G +
Sbjct: 536  SKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQI 595

Query: 330  VEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTL 389
             +A+ L E M   G +P   T+N L+  LCK   V  A   F++M   N  PD++++NT+
Sbjct: 596  QKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTI 655

Query: 390  LY----------------------------------GYCRSGNIGEAF------------ 403
            ++                                  G  +SG I +AF            
Sbjct: 656  IHGFIKQNQIKNAIWLFHQMKKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGS 715

Query: 404  -----------------------LLFDE-LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
                                   +LF E L  R +         +I  LC++    VA+ 
Sbjct: 716  NIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARN 775

Query: 440  LKENMINQ-GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
            +      + G+ P +  Y ++++G  ++ N+ +A   F EM   G  PD F Y + I   
Sbjct: 776  VFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAH 835

Query: 499  LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
             K G  +E + L +EML +G  P+ ITYN+++  L K   L++A +L   +V   F P  
Sbjct: 836  GKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTP 895

Query: 559  ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
             T+  +I   L+ G L    ++F+ M+  G  P    Y +L++ +   G ++ A  +F  
Sbjct: 896  CTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKR 955

Query: 619  MQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGN 678
            M  +GIRP++ +Y  L++ LC   R+D A   F  +++ G+ P+   Y ++IN    +  
Sbjct: 956  MVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQR 1015

Query: 679  WQEALRLYKEMLDREIEPDYCTHSALLL 706
             +EAL L+ EM +R I PD  T+++L+L
Sbjct: 1016 TEEALSLFHEMQNRGIVPDLYTYNSLIL 1043



 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 154/566 (27%), Positives = 286/566 (50%), Gaps = 38/566 (6%)

Query: 177  DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
            ++++  Y+K   V++ + + ++M +    PDV   N +I  L   G   +A +++  M E
Sbjct: 513  NMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEE 572

Query: 237  FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
              + P++VTYN +L    KEG++Q+A++L   M G GCSPN +T+N L+    +N E++ 
Sbjct: 573  MNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDL 632

Query: 297  ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
            A  +   M  +  +    ++N II G+ ++  +  A+ L  +M  + + P   T   L+ 
Sbjct: 633  ALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQM-KKLLRPDHVTLCTLLP 691

Query: 357  GLCKWGRVSDA---------------RHRFFEMLRKNVIPDIISYNTLLYG--------- 392
            G+ K G++ DA                  F+E +   ++ +  +   +L+G         
Sbjct: 692  GVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAIC 751

Query: 393  ------------YCRSGNIGEAFLLFDEL-RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
                         C+      A  +F +  +   + PT+  YN LIDG     ++EVA  
Sbjct: 752  KDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWN 811

Query: 440  LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
            L E M + G  PD  TY  +++   K G ++   + ++EML +G +P+   Y   I+  +
Sbjct: 812  LFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLV 871

Query: 500  KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
            K     +A  L   +++  F P   T+  L+ GL K G L++A+E+   MV  G  P+  
Sbjct: 872  KSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSA 931

Query: 560  TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
             Y  +++   ++G +    + F  M+++G+ P L +YT+L+      GR++ A  YF ++
Sbjct: 932  IYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKL 991

Query: 620  QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
            +  G+ P+++ YN +INGL R +R ++A  LF +M+  GI+P+ YTY  LI      G  
Sbjct: 992  KQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMI 1051

Query: 680  QEALRLYKEMLDREIEPDYCTHSALL 705
            +EA ++Y+E+    ++P+  T++AL+
Sbjct: 1052 EEAGKIYEELQFIGLKPNVFTYNALI 1077



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 152/533 (28%), Positives = 259/533 (48%), Gaps = 4/533 (0%)

Query: 176 LDLLLLIYTK---KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR 232
           +D  L+I+     +  + Q      KM   G + +  + N +I  L  +GF  +A EVYR
Sbjct: 159 VDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYR 218

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
            M   G+KPS+ T++ ++ +  K   ++  + LL EM+  G  PN  TY + I    R+G
Sbjct: 219 RMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDG 278

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
           ++++A  +++ M   G      +Y  +I        L +A+ L  +M +    P   TY 
Sbjct: 279 KIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYV 338

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
            L+      G +      + EM      PD++++  L+   C++G I EAF L D +R +
Sbjct: 339 TLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQ 398

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
            ++P + TYNTLI GL R   L+ A  L  NM + G+ P   TY ++++   K G+   A
Sbjct: 399 GVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKA 458

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
            E F +M  +G+ P+  A    +    ++G   EA  +  E+ + G  PD +TYN+++  
Sbjct: 459 LETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKC 518

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
             K+G ++EA +LL +M      PD I   S+I    + G +     +F  M    L+PT
Sbjct: 519 YSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPT 578

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
           +VTY +L+      G+++ A   F  M   G  PN IT+N L++ LC+   +D A  +F 
Sbjct: 579 VVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFY 638

Query: 653 DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            M      P+  T+  +I+        + A+ L+ +M  + + PD+ T   LL
Sbjct: 639 KMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQM-KKLLRPDHVTLCTLL 690



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 157/567 (27%), Positives = 271/567 (47%), Gaps = 38/567 (6%)

Query: 175  ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
            +++ L+    K   VE+   +F +M    L P V   N ++  L   G   KA +++  M
Sbjct: 546  VINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESM 605

Query: 235  GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
               G  P+ +T+NT+LD  CK  E+  AL++ ++M    C P+ +T+N +I GF +  ++
Sbjct: 606  NGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQI 665

Query: 295  EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE---------------EM 339
            + A  L   M KL L+    +   ++ G  + G + +A  + E               E 
Sbjct: 666  KNAIWLFHQMKKL-LRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWED 724

Query: 340  VTRGVAPTLATYNILIYG---------------------LCKWGRVSDARHRFFEMLRK- 377
            V  G+     T   +++G                     LCK  + S AR+ F +  ++ 
Sbjct: 725  VMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKEL 784

Query: 378  NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
             V P +  YN L+ G+    N+  A+ LF+E++S    P   TYN+LID   + G +   
Sbjct: 785  GVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINEL 844

Query: 438  QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
              L + M+ +G  P+ ITY ++++   K   L  A + +  ++     P    +   I G
Sbjct: 845  FDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDG 904

Query: 498  ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
             LK G   +A+ + + M+  G  P+   YN+LV+G  KLG ++ A E  ++MV +G  PD
Sbjct: 905  LLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPD 964

Query: 558  HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
              +YT ++      G +      F  + + GL P LV Y ++I+      R E A   F 
Sbjct: 965  LKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFH 1024

Query: 618  EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
            EMQ +GI P++ TYN+LI  L  +  I++A  ++ +++  G+ PN +TY  LI     +G
Sbjct: 1025 EMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSG 1084

Query: 678  NWQEALRLYKEMLDREIEPDYCTHSAL 704
            N + A  +YK+M+    +P+  T + L
Sbjct: 1085 NSELAYGIYKKMMVGGCDPNTGTFAQL 1111



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 146/556 (26%), Positives = 259/556 (46%), Gaps = 42/556 (7%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           ++  + +F KM  +   PD      ++    D G   K  +++  M   G  P +VT+  
Sbjct: 315 LDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTI 374

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++++ CK G + EA +LL  M+ +G  PN  TYN LI+G  R   L+ A  L  +M  LG
Sbjct: 375 LVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLG 434

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           ++ +A++Y  +I  + + G   +AL   E+M  RG+AP +   N  +Y L + GR+ +A+
Sbjct: 435 VEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAK 494

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F E+    + PD ++YN ++  Y + G + EA  L  E+      P V+  N+LID L
Sbjct: 495 AMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTL 554

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
            + G +E A Q+   M    + P V+TY I++ G  K G +  A + F  M   G  P+ 
Sbjct: 555 YKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNT 614

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             + T +    K  +   A ++  +M      PD++T+N ++HG  K   ++ A  L  +
Sbjct: 615 ITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQ 674

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRG--------------------RDLFNNMLRKG 588
           M      PDH+T  +++   ++ G +                        D+   +L + 
Sbjct: 675 M-KKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEA 733

Query: 589 LSPTLVTY-------------TVLIH------AHAARGRLELAFMYFSEMQVKGIRPNVI 629
            +   + +             +VLI        H         F+ F++    G++P + 
Sbjct: 734 GTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKEL--GVKPTLK 791

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
            YN LI+G   +  ++ A+ LF +M+  G  P+ +TY  LI+ +  +G   E   LY EM
Sbjct: 792 VYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEM 851

Query: 690 LDREIEPDYCTHSALL 705
           L R  +P+  T++ ++
Sbjct: 852 LTRGCKPNTITYNMVI 867



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 140/517 (27%), Positives = 244/517 (47%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           VE    VF+ M R  +  +V     I K L   G   +A      M E G   +  +YN 
Sbjct: 140 VEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNG 199

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++    + G  +EALE+   M   G  P+  T++ L+    +   ++   GL+ +M  +G
Sbjct: 200 LIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMG 259

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           L+ + ++Y   I      G + EA  + + M   G  P + TY +LI  LC   ++ DA 
Sbjct: 260 LRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAM 319

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F +M   +  PD ++Y TLL  +   G++ +   ++ E+ +    P VVT+  L++ L
Sbjct: 320 CLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNAL 379

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G +  A  L + M  QG+LP++ TY  +++G  +   L  A + F+ M   G++P  
Sbjct: 380 CKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTA 439

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
           + Y   I    K G   +A    E+M A+G  P+++  N  ++ L ++G L EA  +  +
Sbjct: 440 YTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNE 499

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           +   G  PD +TY  ++    ++G +     L + M +    P ++    LI      GR
Sbjct: 500 LKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGR 559

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           +E A+  F  M+   + P V+TYN L+ GL +  +I +A  LF  M   G  PN  T+  
Sbjct: 560 VEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNT 619

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           L++  C       AL+++ +M      PD  T + ++
Sbjct: 620 LLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTII 656



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 153/622 (24%), Positives = 293/622 (47%), Gaps = 21/622 (3%)

Query: 41  SESNNKDSVLNPESESYYKELIISTVEEKPWAF-----CNNRWVSDHFQAVVSDPELLVR 95
           S S+    VL+  S+  +      +V E P        CN+          V D   +  
Sbjct: 89  SSSDEVLGVLHSISDPIHALFYFKSVGELPNVVHTTETCNHMLEILRVHRRVEDMAFVFD 148

Query: 96  VLNR--IREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAY-------WV 146
           ++ R  IR      L  F+ +  + G+++      + LE + E+G + +AY       ++
Sbjct: 149 LMQRQIIRRNVDTYLIIFKSLFIRGGLRQAP----SALEKMREAGFVLNAYSYNGLIHFL 204

Query: 147 VETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLP 206
           +++  C     +   ++  GL    S+K    L++   K+  ++  + +  +M   GL P
Sbjct: 205 LQSGFCKEALEVYRRMVSEGLKP--SLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRP 262

Query: 207 DVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELL 266
           ++      I+VL  +G   +A  + + M + G  P +VTY  ++D+ C   ++ +A+ L 
Sbjct: 263 NIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLF 322

Query: 267 WEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEK 326
            +M+     P+ VTY  L+  FS  G L++   +  +M   G      ++  ++    + 
Sbjct: 323 TKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKA 382

Query: 327 GLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISY 386
           G + EA +L + M  +GV P L TYN LI GL +  R+ DA   F  M    V P   +Y
Sbjct: 383 GRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTY 442

Query: 387 NTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMIN 446
             L+  + +SG+ G+A   F+++++R + P +V  N  +  L   G L  A+ +   + +
Sbjct: 443 ILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKS 502

Query: 447 QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSE 506
            G+ PD +TY +M+    K+G +  A +  +EM +   +PD     + I    K G   E
Sbjct: 503 SGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEE 562

Query: 507 AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
           A+++   M      P ++TYN+L+ GL K G +++A +L   M G G  P+ IT+ +++ 
Sbjct: 563 AWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLD 622

Query: 567 ASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRP 626
              +  ++     +F  M      P ++T+  +IH    + +++ A   F +M+ K +RP
Sbjct: 623 CLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMK-KLLRP 681

Query: 627 NVITYNALINGLCRLRRIDQAY 648
           + +T   L+ G+ +  +I+ A+
Sbjct: 682 DHVTLCTLLPGVIKSGQIEDAF 703



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 148/551 (26%), Positives = 246/551 (44%), Gaps = 47/551 (8%)

Query: 194 LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV----TYNTM 249
           LV N   R G      + + ++ VL      + A   ++ +GE    P++V    T N M
Sbjct: 79  LVVNGKPRKG-----SSSDEVLGVLHSISDPIHALFYFKSVGEL---PNVVHTTETCNHM 130

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           L+       +++   +   MQ +    N  TY ++       G L QA   +  M + G 
Sbjct: 131 LEILRVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGF 190

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
            ++A+SYN +I    + G   EAL +   MV+ G+ P+L T++ L+    K   +     
Sbjct: 191 VLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMG 250

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
              EM    + P+I +Y   +    R G I EA+ +   +      P VVTY  LID LC
Sbjct: 251 LLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALC 310

Query: 430 RY-----------------------------------GDLEVAQQLKENMINQGILPDVI 454
                                                G L+  +++   M   G  PDV+
Sbjct: 311 TARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVV 370

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
           T+TI+VN  CK G ++ A +  + M ++G+ P+   Y T I+G L+     +A  L   M
Sbjct: 371 TFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNM 430

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
            + G  P   TY +L+    K G   +A E   KM   G  P+ +   + +++  EMG L
Sbjct: 431 ESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRL 490

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
              + +FN +   GL+P  VTY +++  ++  G+++ A    SEM      P+VI  N+L
Sbjct: 491 GEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSL 550

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           I+ L +  R+++A+ +F  MEE  + P   TY IL+      G  Q+A++L++ M     
Sbjct: 551 IDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGC 610

Query: 695 EPDYCTHSALL 705
            P+  T + LL
Sbjct: 611 SPNTITFNTLL 621



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 142/498 (28%), Positives = 226/498 (45%), Gaps = 38/498 (7%)

Query: 176  LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
             + LL    K   V+  L +F KM      PDV   N II           A  ++  M 
Sbjct: 617  FNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMK 676

Query: 236  EFGIKPSIVTYNTMLDSFCKEGEMQEALEL---------------LWEMQGRGCSPNGVT 280
            +  ++P  VT  T+L    K G++++A  +                WE    G      T
Sbjct: 677  KL-LRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGT 735

Query: 281  YNVLITG---------------------FSRNGELEQARGLIRDMLK-LGLKVSAHSYNP 318
               ++ G                       ++ +   AR +     K LG+K +   YN 
Sbjct: 736  EKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNL 795

Query: 319  IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
            +I G+ E   +  A NL EEM + G AP   TYN LI    K G++++    + EML + 
Sbjct: 796  LIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRG 855

Query: 379  VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
              P+ I+YN ++    +S  + +A  L+  L S +  PT  T+  LIDGL + G L+ A 
Sbjct: 856  CKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAH 915

Query: 439  QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
            ++ + M++ G  P+   Y I+VNG  K+G++  A EFF  M+++G++PD  +YT  +   
Sbjct: 916  EMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDIL 975

Query: 499  LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
               G   +A    E++   G  PDL+ YN++++GL +    EEA  L  +M   G +PD 
Sbjct: 976  CIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDL 1035

Query: 559  ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
             TY S+I     +G +     ++  +   GL P + TY  LI  +   G  ELA+  + +
Sbjct: 1036 YTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKK 1095

Query: 619  MQVKGIRPNVITYNALIN 636
            M V G  PN  T+  L N
Sbjct: 1096 MMVGGCDPNTGTFAQLPN 1113



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 124/450 (27%), Positives = 218/450 (48%), Gaps = 14/450 (3%)

Query: 120  VKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLL 179
            ++ D    CT+L  +I+SG +  A+ + E              +G  +       ++  +
Sbjct: 679  LRPDHVTLCTLLPGVIKSGQIEDAFRITEDFF---------YQVGSNIDRSFWEDVMGGI 729

Query: 180  LLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMGEFG 238
            L     ++  E+ +L   +++   +  D      IIKVL  +  +  AR V+ +   E G
Sbjct: 730  L----TEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELG 785

Query: 239  IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
            +KP++  YN ++D F +   ++ A  L  EM+  GC+P+  TYN LI    ++G++ +  
Sbjct: 786  VKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELF 845

Query: 299  GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
             L  +ML  G K +  +YN +I    +   L +A++L   +V+   +PT  T+  LI GL
Sbjct: 846  DLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGL 905

Query: 359  CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
             K GR+ DA   F  M+     P+   YN L+ GY + G++  A   F  +    + P +
Sbjct: 906  LKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDL 965

Query: 419  VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
             +Y  L+D LC  G ++ A    E +   G+ PD++ Y +M+NG  +      A   F+E
Sbjct: 966  KSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHE 1025

Query: 479  MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
            M  +G+ PD + Y + I     +G   EA ++ EE+   G  P++ TYN L+ G    G+
Sbjct: 1026 MQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGN 1085

Query: 539  LEEANELLRKMVGDGFIPDHITYTSIIHAS 568
             E A  + +KM+  G  P+  T+  + + S
Sbjct: 1086 SELAYGIYKKMMVGGCDPNTGTFAQLPNQS 1115


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 150/508 (29%), Positives = 251/508 (49%), Gaps = 2/508 (0%)

Query: 186 KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV-LRDNGFSVKAREVYRMMGEFGIKPSIV 244
           +  +   L V ++M R G  P     + I++   R  GF    R V   +   G    + 
Sbjct: 172 RGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVR-VLEDLHARGCALDVG 230

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
             N +L++ C +G + EAL LL ++   GC P+ V+YN ++ G          + L+ +M
Sbjct: 231 NCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEM 290

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           +++    +  ++N +I      GL      +  +MV  G  P +  Y  +I G+CK G +
Sbjct: 291 VRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHL 350

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
             A      M    + P+++ YNTLL G C +    E   L  E+  ++     VT+N L
Sbjct: 351 EVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNIL 410

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           +D  C+ G ++   +L E M+  G +PDVITYT ++NG CK G +  A      M   G 
Sbjct: 411 VDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGC 470

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
           +P+  +YT  + G        +A  L  +M+ +G P + IT+N L++ LCK G +E+A E
Sbjct: 471 KPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIE 530

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           LL++M+ +G  PD I+Y+++I    + G      +L N M+ KG+SP  + Y+ +  A +
Sbjct: 531 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALS 590

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
             GR+      F  +Q   IR + + YNA+I+ LC+    ++A      M   G +PN+ 
Sbjct: 591 REGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNES 650

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDR 692
           TYTILI    + G  +EA  +  E+  +
Sbjct: 651 TYTILIRGLASEGFVKEAQEMLTELCSK 678



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 141/466 (30%), Positives = 227/466 (48%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V   +   G   DV NCN ++  + D G   +A  + R +  FG +P +V+YN +L   C
Sbjct: 216 VLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLC 275

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
                    EL+ EM    C PN VT+N LI+   RNG  E+   ++  M++ G      
Sbjct: 276 MAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIR 335

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
            Y  II G  ++G L  A  +   M + G+ P +  YN L+ GLC   R  +      EM
Sbjct: 336 MYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEM 395

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
             K+   D +++N L+  +C++G +     L +++     +P V+TY T+I+G C+ G +
Sbjct: 396 FDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLI 455

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A  L ++M   G  P+ I+YTI++ G C       A +  ++M+++G   +   + T 
Sbjct: 456 DEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTL 515

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I    K G   +A  L ++ML  G  PDLI+Y+ ++ GL K G  +EA ELL  MV  G 
Sbjct: 516 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGM 575

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            P+ I Y+SI  A    G + +   +F+N+    +    V Y  +I +   RG  E A  
Sbjct: 576 SPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIE 635

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
           + + M   G  PN  TY  LI GL     + +A  +  ++  +G L
Sbjct: 636 FLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 681



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 137/473 (28%), Positives = 230/473 (48%), Gaps = 4/473 (0%)

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           YN M+  +C+ G+++ A  L   +      PN  TY  ++      G +  A  ++ +M 
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 186

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
           + G       Y+ I+      G    A+ + E++  RG A  +   N+++  +C  G V 
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
           +A H   ++      PD++SYN +L G C +   G    L +E+      P +VT+NTLI
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
             LCR G  E   ++   M+  G  PD+  Y  +++G CK G+L +A E  N M   GL+
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 366

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           P+   Y T + G        E   L  EM  K  P D +T+N+LV   C+ G ++   EL
Sbjct: 367 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 426

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
           L +M+  G +PD ITYT++I+   + G +     L  +M   G  P  ++YT+++    +
Sbjct: 427 LEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 486

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
             R   A    S+M  +G   N IT+N LIN LC+   ++QA  L   M   G  P+  +
Sbjct: 487 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLIS 546

Query: 666 YTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAV 718
           Y+ +I+    AG   EAL L   M+++ + P+   +S+ +   L ++ +++ V
Sbjct: 547 YSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSS-IASALSREGRINKV 598



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 200/388 (51%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           +I   + L+    +  + E+   V  +M+ +G  PD++    II  +   G    A E+ 
Sbjct: 298 NIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEIL 357

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M  +G+KP++V YNT+L   C     +E  ELL EM  + C  + VT+N+L+  F +N
Sbjct: 358 NRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQN 417

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G +++   L+  ML+ G      +Y  +I G+ ++GL+ EA+ L + M   G  P   +Y
Sbjct: 418 GLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISY 477

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
            I++ GLC   R  DA     +M+++    + I++NTL+   C+ G + +A  L  ++  
Sbjct: 478 TIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLV 537

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
               P +++Y+T+IDGL + G  + A +L   M+N+G+ P+ I Y+ + +   + G ++ 
Sbjct: 538 NGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINK 597

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
             + F+ +    ++ D   Y   I+   K G+T  A      M++ G  P+  TY +L+ 
Sbjct: 598 VIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIR 657

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHI 559
           GL   G ++EA E+L ++   G +  H+
Sbjct: 658 GLASEGFVKEAQEMLTELCSKGALRKHL 685



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 110/409 (26%), Positives = 184/409 (44%), Gaps = 3/409 (0%)

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           YN ++ GY   G L  A  L   +    V P   TY  ++  LC  GR++DA     EM 
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 186

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
           R+   P    Y+ +L   CR G    A  + ++L +R     V   N +++ +C  G ++
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            A  L  ++ + G  PDV++Y  ++ G C        +E   EM+R    P+   + T I
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
           +   + G     + +  +M+  G  PD+  Y  ++ G+CK G LE A+E+L +M   G  
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 366

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           P+ + Y +++             +L   M  K      VT+ +L+      G ++     
Sbjct: 367 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 426

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
             +M   G  P+VITY  +ING C+   ID+A  L   M   G  PN  +YTI++   C+
Sbjct: 427 LEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 486

Query: 676 AGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           A  W +A  L  +M+ +    +  T + L+     K     A+E L+ +
Sbjct: 487 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQM 535


>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
 gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
          Length = 439

 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 144/424 (33%), Positives = 225/424 (53%), Gaps = 9/424 (2%)

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           +A E Y  M E    P++   N +L S C+ G M +A+ +   +Q   CSP+ +T N+LI
Sbjct: 21  EAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAIFRGIQ---CSPSVITLNILI 77

Query: 286 TGFSRNGELEQARGLIRDMLK-LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
            GF     L++A  L  +M K   L   A +Y  II  Y +   L +A  L EE  +   
Sbjct: 78  NGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQLLEE--SSCC 135

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEML-RKNVIPDIISYNTLLYGYCRSGNIGEAF 403
           +  +     +  G CK  RV +A     +M+ +K+  PDI+++N +++G+C++G + EA+
Sbjct: 136 SSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAY 195

Query: 404 LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG--ILPDVITYTIMVN 461
            + + L S   VP  VTY TLIDG C+ G+L  A QL + + ++     P+V+T+  +++
Sbjct: 196 EMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALIS 255

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
           G CK   L  A E   +M  + L+ D F YTT + G  K G TSE  R+ EEML +G  P
Sbjct: 256 GLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNP 315

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
            ++TY  LVH  CK GSL++A +++R MV  G  PD  TYT ++    E G +R   + F
Sbjct: 316 SVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFF 375

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
             +LR+   P  V Y+ L+        ++ A  Y+ EM  + + P+  T   L+  LC+ 
Sbjct: 376 EKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKR 435

Query: 642 RRID 645
            R D
Sbjct: 436 GRTD 439



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 128/443 (28%), Positives = 229/443 (51%), Gaps = 13/443 (2%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P+  T++ ++   CK G + EA+E   +M  R C PN    N+L+    + G ++QA  +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60

Query: 301 IRDMLKLGLKVSAH--SYNPIICGYSEKGLLVEALNLEEEMVTR-GVAPTLATYNILIYG 357
            R     G++ S    + N +I G+ E  LL +AL L  EM     + P   TY  +I  
Sbjct: 61  FR-----GIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKC 115

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF-LLFDELRSRNLVP 416
            CK  R+  AR    E        D+I+  ++  G+C++  + EA+ LL D +  ++  P
Sbjct: 116 YCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKP 173

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
            +V +N +I G C+ G +  A ++ E +++ G +P+ +TYT +++G CK GNLS A + F
Sbjct: 174 DIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLF 233

Query: 477 NEMLRKG--LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
             +  +    +P+   +   I+G  K      A+ L ++M A+    D  TY  L+ GLC
Sbjct: 234 KVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLC 293

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           K G   E + +  +M+ +G  P  +TYT+++HA  + G L+  + +  +M+ KG+ P + 
Sbjct: 294 KQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVT 353

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           TYTVL+      G++  A  +F ++  +   P  + Y+AL+ G C+   +D+A   +++M
Sbjct: 354 TYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEM 413

Query: 655 EEEGILPNKYTYTILINENCNAG 677
            +  + P+  T  +L+   C  G
Sbjct: 414 LDRRLAPDPATCKLLVEMLCKRG 436



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 132/421 (31%), Positives = 218/421 (51%), Gaps = 13/421 (3%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIK--PSIVTYNTMLDSF 253
           +N+ML    +P++++ N ++  L   G   +A  ++R     GI+  PS++T N +++ F
Sbjct: 26  YNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAIFR-----GIQCSPSVITLNILINGF 80

Query: 254 CKEGEMQEALELLWEMQGR-GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
           C+   + +ALEL  EM+      P   TY  +I  + +   L+QAR L+ +       V 
Sbjct: 81  CELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQLLEESSCCSSDVI 140

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA-PTLATYNILIYGLCKWGRVSDARHRF 371
           A     +  G+ +   + EA  L  +MV +  A P +  +N++I+G CK GRV +A    
Sbjct: 141 A--ITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEML 198

Query: 372 FEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN--LVPTVVTYNTLIDGLC 429
             ++    +P+ ++Y TL+ G+C+SGN+ EA  LF  L SR+    P VVT+N LI GLC
Sbjct: 199 ETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLC 258

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
           +   LE A +L + M  + +  D  TYT +++G CK G  S     F EMLR+G  P   
Sbjct: 259 KADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVV 318

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
            YTT +    K G   +A ++   M+AKG PPD+ TY VL+ GL + G +  A E   K+
Sbjct: 319 TYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKI 378

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRL 609
           + +   P  + Y++++    +   +      +  ML + L+P   T  +L+     RGR 
Sbjct: 379 LRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGRT 438

Query: 610 E 610
           +
Sbjct: 439 D 439



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 124/383 (32%), Positives = 202/383 (52%), Gaps = 9/383 (2%)

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P   T+++LI GLCK GR+ +A   + +ML ++ +P++   N LL   C++G + +A  +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM-INQGILPDVITYTIMVNGSC 464
           F   R     P+V+T N LI+G C    L+ A +L   M  N  ++P+  TYT ++   C
Sbjct: 61  F---RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML-AKGFPPDL 523
           KM  L  AR+   E        D  A T+   G  K     EAY+L  +M+  K   PD+
Sbjct: 118 KMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDI 175

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
           + +NV++HG CK G + EA E+L  +V  G +P+ +TYT++I    + G+L     LF  
Sbjct: 176 VAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKV 235

Query: 584 MLRKG--LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
           +  +     P +VT+  LI       RLE AF    +M+ + +R +  TY  L++GLC+ 
Sbjct: 236 LSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQ 295

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
            R  +   +F +M  EG  P+  TYT L++ +C AG+ Q+A ++ + M+ + I PD  T+
Sbjct: 296 GRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTY 355

Query: 702 SALLLKQLDKDYKVHAVEYLESL 724
           + LL    +      A E+ E +
Sbjct: 356 TVLLEGLFENGKVRTATEFFEKI 378



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 149/305 (48%), Gaps = 5/305 (1%)

Query: 168 SSCVSIKILDLLLLI--YTKKSMVEQCL-LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS 224
           SSC S  ++ +  +   + K   V++   L+ + + +    PD+   N II      G  
Sbjct: 132 SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRV 191

Query: 225 VKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG--CSPNGVTYN 282
            +A E+   +   G  P+ VTY T++D FCK G + EAL+L   +  R     PN VT+N
Sbjct: 192 REAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFN 251

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
            LI+G  +   LE A  L++ M    L+    +Y  ++ G  ++G   E   + EEM+  
Sbjct: 252 ALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLRE 311

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           G  P++ TY  L++  CK G + DA+     M+ K + PD+ +Y  LL G   +G +  A
Sbjct: 312 GCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTA 371

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
              F+++      P  V Y+ L+ G C+   ++ A +    M+++ + PD  T  ++V  
Sbjct: 372 TEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEM 431

Query: 463 SCKMG 467
            CK G
Sbjct: 432 LCKRG 436



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 139/319 (43%), Gaps = 53/319 (16%)

Query: 117 QPGVKRDEFVFCTILEILIESGLLRSAYWVVETVV---CVNMHGILDVLIGGGLSSCVSI 173
           +   K D   +  I+    ++G +R AY ++ET+V   CV        LI G   S    
Sbjct: 168 KKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLS 227

Query: 174 KILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRM 233
           + L L  ++ ++    E  ++ FN ++ +GL       +R+     ++ F     E+ + 
Sbjct: 228 EALQLFKVLSSRDHHAEPNVVTFNALI-SGLC----KADRL-----EHAF-----ELVKQ 272

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M    ++    TY T++D  CK+G   E   +  EM   GC+P+ VTY  L+    + G 
Sbjct: 273 MKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGS 332

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           L+ A+ +IR M                                   V +G+ P + TY +
Sbjct: 333 LQDAQQVIRSM-----------------------------------VAKGIPPDVTTYTV 357

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           L+ GL + G+V  A   F ++LR+   P  + Y+ L+ G C++  + EA   + E+  R 
Sbjct: 358 LLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRR 417

Query: 414 LVPTVVTYNTLIDGLCRYG 432
           L P   T   L++ LC+ G
Sbjct: 418 LAPDPATCKLLVEMLCKRG 436



 Score = 42.7 bits (99), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 28/124 (22%), Positives = 53/124 (42%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           S+     L+  + K   ++    V   M+  G+ PDV     +++ L +NG    A E +
Sbjct: 316 SVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFF 375

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             +      P  V Y+ ++   CK   + EA++   EM  R  +P+  T  +L+    + 
Sbjct: 376 EKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKR 435

Query: 292 GELE 295
           G  +
Sbjct: 436 GRTD 439


>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 966

 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 159/531 (29%), Positives = 253/531 (47%), Gaps = 30/531 (5%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK-VLRDNGFSVKAREVYRMMGEFGIKPSI 243
           + S+  + +   ++M  N  +P+V     ++   L+        R +  MM E G  PS 
Sbjct: 283 EASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTE-GCNPSP 341

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL------EQA 297
             +N+++ ++C   +   A +L   M   GC P  V YN+ I       EL      + A
Sbjct: 342 SLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLA 401

Query: 298 RGLIRDMLKLGL---KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
             +  +ML       K++  ++   +CG    G   +A  + +EM+ +G  P  +TY  +
Sbjct: 402 EKVYEEMLVASCVLNKINTANFARCLCGV---GKFEKAFQIVKEMMRKGFVPDASTYTKV 458

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           I  LC+  RV  A   F EM +  V PD+ +Y  L+  +C++G I +A   FDE+RS   
Sbjct: 459 ITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGC 518

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P VVTY  L+    +   L  A  +   M+     P+ ITY+ +++G CK G +  A E
Sbjct: 519 SPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACE 578

Query: 475 FFNEMLRKG----------------LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
            + +++                   + P+   Y   + G  K    S+A+ L + MLA G
Sbjct: 579 VYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAG 638

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
             P+ I Y+ LV G CK+G ++ A E+  +M   G++P   TYTS+I    + G L    
Sbjct: 639 CEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAM 698

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
            + + ML+   +P +VTYT ++      G  E A    S M+ KG  PNV+TY ALI+GL
Sbjct: 699 KVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGL 758

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
            +  ++D    LF+ M+ +G  PN  TY ILIN  C AG   +A  L  EM
Sbjct: 759 GKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEM 809



 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 182/703 (25%), Positives = 297/703 (42%), Gaps = 104/703 (14%)

Query: 92  LLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVV 151
           ++V VL  +R  P + +RFF W E Q G K     +  + E+L      R+A  ++  + 
Sbjct: 103 VVVAVLGAVRS-PELCVRFFLWAERQVGYKHTGACYDALAEVLGFEDPARTAERLLREI- 160

Query: 152 CVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNC 211
                G  D  + G        ++L++L+     + +  + L    ++   G  P     
Sbjct: 161 -----GEDDRDVLG--------RLLNVLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTY 207

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELL----- 266
           N +++VL   G    A  V + M   G      T  +   + CKEG   +AL+LL     
Sbjct: 208 NALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWGDALDLLEREDF 267

Query: 267 ---------------------------WEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
                                        M+     PN VTY  L+TGF +  +L   + 
Sbjct: 268 KLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKR 327

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG-- 357
           +I  M+  G   S   +N ++  Y        A  L   M T G  P    YNI I    
Sbjct: 328 IINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSIC 387

Query: 358 ---------------------------------------LCKWGRVSDARHRFFEMLRKN 378
                                                  LC  G+   A     EM+RK 
Sbjct: 388 GREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKG 447

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
            +PD  +Y  ++   C++  + +AFLLF E++   + P V TY  LID  C+ G +E AQ
Sbjct: 448 FVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQ 507

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
              + M + G  P+V+TYT +++   K   L  A + F+ M+     P+   Y+  I G 
Sbjct: 508 SWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGL 567

Query: 499 LKLGDTSEAYRLQEEMLAKG----------------FPPDLITYNVLVHGLCKLGSLEEA 542
            K G+  +A  +  +++                     P+++TY  LV+GLCK   + +A
Sbjct: 568 CKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDA 627

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
           ++LL  M+  G  P+ I Y +++    ++G++   +++F  M + G  P++ TYT LI  
Sbjct: 628 HDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDR 687

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
               GRL+LA    S+M      PNV+TY A+++GLC+    ++A  L   ME++G  PN
Sbjct: 688 MFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPN 747

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             TYT LI+    AG     L L+ +M  +   P+Y T+  L+
Sbjct: 748 VVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILI 790



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 150/515 (29%), Positives = 246/515 (47%), Gaps = 21/515 (4%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           E+   +  +M+R G +PD     ++I  L       KA  +++ M + G+ P + TY  +
Sbjct: 434 EKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTIL 493

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           +DSFCK G +++A     EM+  GCSPN VTY  L+  + ++ +L QA  +   M+    
Sbjct: 494 IDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDAC 553

Query: 310 KVSAHSYNPIICGYSEKGLLVEAL-----------NLEEEMVTRG-----VAPTLATYNI 353
             +A +Y+ +I G  + G + +A            N+E +    G     ++P + TY  
Sbjct: 554 YPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGA 613

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           L+ GLCK  +VSDA      ML     P+ I Y+ L+ G+C+ G I  A  +F  +    
Sbjct: 614 LVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCG 673

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
            +P+V TY +LID + + G L++A ++   M+     P+V+TYT MV+G CK G    A 
Sbjct: 674 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKAL 733

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
              + M +KG  P+   YT  I G  K G       L  +M  KG  P+ +TY +L++  
Sbjct: 734 NLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHC 793

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
           C  G L++A+ LL +M    +      Y + +    +      G  L   M     +P  
Sbjct: 794 CAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLG--LLEEMESHDTAPIA 851

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT---YNALINGLCRLRRIDQAYGL 650
             Y +LI + +  GRLE A     EM       N+ +   + +LI  LC   ++++A  L
Sbjct: 852 PVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVAL 911

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           + +M   GI+P+   +  L+        W EAL+L
Sbjct: 912 YSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQL 946



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 166/642 (25%), Positives = 285/642 (44%), Gaps = 78/642 (12%)

Query: 112 RWVETQPGVKRDEF----VFCT-ILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           RW +    ++R++F    V CT ++  L+E+ L   A   +  + C +            
Sbjct: 254 RWGDALDLLEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSY----------- 302

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
           + + V+ + L   L  + KK  +  C  + N M+  G  P     N ++    +      
Sbjct: 303 IPNVVTYRTL---LTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAY 359

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKE------------------------------ 256
           A +++  M   G  P  V YN  + S C                                
Sbjct: 360 AYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKIN 419

Query: 257 -----------GEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
                      G+ ++A +++ EM  +G  P+  TY  +IT   +   +++A  L ++M 
Sbjct: 420 TANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMK 479

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
           K+G+    ++Y  +I  + + GL+ +A +  +EM + G +P + TY  L++   K  ++ 
Sbjct: 480 KVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLY 539

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL---------------- 409
            A   F  M+     P+ I+Y+ L+ G C++G I +A  ++ +L                
Sbjct: 540 QANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGK 599

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
            +  + P VVTY  L++GLC+   +  A  L + M+  G  P+ I Y  +V+G CK+G +
Sbjct: 600 DTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEI 659

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A+E F  M + G  P    YT+ I    K G    A ++  +ML     P+++TY  +
Sbjct: 660 DSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAM 719

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           V GLCK G  E+A  LL  M   G  P+ +TYT++I    + G +  G +LF  M  KG 
Sbjct: 720 VDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGC 779

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
           +P  VTY +LI+   A G L+ A +   EM+       +  Y   + G    +R   + G
Sbjct: 780 APNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFS--KRFLASLG 837

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           L  +ME     P    Y +LI+    AG  + AL L+KEM++
Sbjct: 838 LLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMME 879



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 130/499 (26%), Positives = 227/499 (45%), Gaps = 52/499 (10%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMGE 236
           +L+  + K  ++EQ    F++M   G  P+V     ++     +    +A +++ RM+G+
Sbjct: 492 ILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGD 551

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG----------------CSPNGVT 280
               P+ +TY+ ++D  CK GE+Q+A E+  ++ G                   SPN VT
Sbjct: 552 -ACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVT 610

Query: 281 YNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV 340
           Y  L+ G  +  ++  A  L+  ML  G + +   Y+ ++ G+ + G +  A  +   M 
Sbjct: 611 YGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMT 670

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
             G  P++ TY  LI  + K GR+  A     +ML+ +  P++++Y  ++ G C++G   
Sbjct: 671 KCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETE 730

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           +A  L   +  +   P VVTY  LIDGL + G ++   +L   M  +G  P+ +TY I++
Sbjct: 731 KALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILI 790

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
           N  C  G L  A    +EM +         Y T + G  K    S    L EEM +    
Sbjct: 791 NHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLG--LLEEMESHDTA 848

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           P    Y +L+    K G LE A EL ++M+              + +SL M      +D+
Sbjct: 849 PIAPVYGMLIDSFSKAGRLETALELHKEMME-------------VSSSLNMAS----KDM 891

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
                          +T LI A     ++E A   +SEM+ +GI P++  +  L+ GL  
Sbjct: 892 ---------------HTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIE 936

Query: 641 LRRIDQAYGLFIDMEEEGI 659
             + ++A  L   + +EG+
Sbjct: 937 RNKWNEALQLCYGICQEGV 955



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 138/586 (23%), Positives = 246/586 (41%), Gaps = 57/586 (9%)

Query: 45  NKDSVLNPE----SESYYKELIIST-----VEEKPWA--FCNNRWVSDHFQAV------- 86
            ++ + NPE    +E  Y+E+++++     +    +A   C        FQ V       
Sbjct: 388 GREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKG 447

Query: 87  -VSDPELLVRVLNRIREKPRIALRFFRWVETQP-GVKRDEFVFCTILEILIESGLLRSAY 144
            V D     +V+  + +  R+   F  + E +  GV  D + +  +++   ++GL+  A 
Sbjct: 448 FVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQA- 506

Query: 145 WVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGL 204
                          D +   G S   ++     LL  Y K   + Q   +F++M+ +  
Sbjct: 507 -----------QSWFDEMRSAGCSP--NVVTYTALLHAYLKSKQLYQANDIFHRMVGDAC 553

Query: 205 LPDVKNCNRIIKVLRDNGFSVKAREVY-RMMGEFG---------------IKPSIVTYNT 248
            P+    + +I  L   G   KA EVY +++G                  I P++VTY  
Sbjct: 554 YPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGA 613

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++  CK  ++ +A +LL  M   GC PN + Y+ L+ GF + GE++ A+ +   M K G
Sbjct: 614 LVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCG 673

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
              S H+Y  +I    + G L  A+ +  +M+     P + TY  ++ GLCK G    A 
Sbjct: 674 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKAL 733

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
           +    M +K   P++++Y  L+ G  ++G +     LF +++++   P  VTY  LI+  
Sbjct: 734 NLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHC 793

Query: 429 CRYGDLEVAQQLKENMINQGILPDVIT-YTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           C  G L+ A  L + M  Q   P  +  Y   V G  K    S+      EM      P 
Sbjct: 794 CAAGLLDDAHLLLDEM-KQTHWPKYLQGYRTTVQGFSKRFLASLG--LLEEMESHDTAPI 850

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT---YNVLVHGLCKLGSLEEANE 544
              Y   I    K G    A  L +EM+      ++ +   +  L+  LC    +EEA  
Sbjct: 851 APVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVA 910

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
           L  +M   G +PD   +  ++   +E         L   + ++G++
Sbjct: 911 LYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYGICQEGVN 956



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 69/303 (22%), Positives = 124/303 (40%), Gaps = 14/303 (4%)

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           N L+   C  G    A +    + + G  P  +TY  +V      G + MA     EM  
Sbjct: 173 NVLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSA 232

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
            G   DR    +      K G   +A  L E    + F  D +    ++ GL +     E
Sbjct: 233 SGFCMDRSTVGSFAQALCKEGRWGDALDLLER---EDFKLDTVLCTQMISGLMEASLFNE 289

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A   L +M  + +IP+ +TY +++   L+   L   + + N M+ +G +P+   +  L+H
Sbjct: 290 AMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVH 349

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR------IDQAYGLFIDME 655
            +        A+  F+ M   G  P  + YN  I  +C          +D A  ++ +M 
Sbjct: 350 TYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEML 409

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL-----KQLD 710
               + NK          C  G +++A ++ KEM+ +   PD  T++ ++      K++D
Sbjct: 410 VASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVD 469

Query: 711 KDY 713
           K +
Sbjct: 470 KAF 472


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 152/483 (31%), Positives = 244/483 (50%), Gaps = 32/483 (6%)

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
           MM   G  PS + +N+++ ++C+ G+   A +LL +M   G  P  V YN+LI G     
Sbjct: 1   MMITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTE 60

Query: 293 ELEQ------ARGLIRDMLKLGL---KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG 343
           +L        A     +ML++G+   KV+  ++   +C     G   +A N+  EM+++G
Sbjct: 61  DLPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCI---GKFEKAYNVIREMMSKG 117

Query: 344 VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF 403
             P  +TY+ +I  LC   +V  A   F EM R  + PD+ +Y TLL  +C+ G I +A 
Sbjct: 118 FIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQAR 177

Query: 404 LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
             FDE++     P VVTY  LI    +   L  A ++ E M++ G +P+++TYT +++G 
Sbjct: 178 NWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGH 237

Query: 464 CKMGNLSMAREFFNEMLRKGLQ-PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
           CK G    A + +  M    +  PD   Y   +  ELK                    P+
Sbjct: 238 CKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELK-------------------EPN 278

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
           ++TY  LV GLCK   ++EA +LL  M  +G  P+ I Y ++I    ++G L   +++F 
Sbjct: 279 VVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFT 338

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
            ML  G SP + TY+ LI       RL+LA    ++M      PNV+ Y  +++GLC++ 
Sbjct: 339 KMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVG 398

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
           + D+AY L + MEE+G  PN  TYT +I+    AG     L L + M  +   P++ T+ 
Sbjct: 399 KTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYR 458

Query: 703 ALL 705
            L+
Sbjct: 459 VLI 461



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 158/519 (30%), Positives = 242/519 (46%), Gaps = 24/519 (4%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V  +M+  G +PD    +++I  L +     KA ++++ M   GI P + TY T+LD FC
Sbjct: 109 VIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFC 168

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K G +++A     EMQ  GC+PN VTY  LI  + +  +L +A  +   ML  G   +  
Sbjct: 169 KVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIV 228

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGV-----------------APTLATYNILIYG 357
           +Y  +I G+ + G   +A  +   M    V                  P + TY  L+ G
Sbjct: 229 TYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDG 288

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           LCK  +V +AR     M  +   P+ I Y+ L+ G+C+ G + EA  +F ++      P 
Sbjct: 289 LCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPN 348

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           V TY++LID L +   L++A ++   M+     P+V+ YT MV+G CK+G    A     
Sbjct: 349 VYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLML 408

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            M  KG  P+   YT  I G  K G       L + M +KG  P+ ITY VL++  C  G
Sbjct: 409 MMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAG 468

Query: 538 SLEEANELLRKMVGDGFIPDHI-TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
            L++A++LL +M    + P HI  Y  +I       +      L   +   G  P L  Y
Sbjct: 469 LLDDAHKLLEEM-KQTYWPKHIGMYRKVIEGFSH--EFVASLGLLAELSEDGSVPILPVY 525

Query: 597 TVLIHAHAARGRLELAFMYFSEM-QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
            +LI      GRLE+A     E+        N  TY +LI  L    ++D+A+ L+ DM 
Sbjct: 526 KLLIDNFIKAGRLEMALELHEELSSFSAAYQN--TYVSLIESLTLACKVDKAFKLYSDMT 583

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
             G +P       LI      G W+EAL+L   +   +I
Sbjct: 584 RRGFVPELSMLVCLIKGLLRVGKWEEALQLSDSICQMDI 622



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 146/520 (28%), Positives = 247/520 (47%), Gaps = 36/520 (6%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A   Y  M E G+  + V         C  G+ ++A  ++ EM  +G  P+  TY+ +I 
Sbjct: 71  AERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKVIG 130

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
                 ++E+A  L ++M + G+    ++Y  ++  + + GL+ +A N  +EM   G AP
Sbjct: 131 YLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAP 190

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
            + TY  LI+   K  ++S A   F  ML    +P+I++Y  L+ G+C++G   +A  ++
Sbjct: 191 NVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIY 250

Query: 407 DELRSRNL-----------------VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
             +++  +                  P VVTY  L+DGLC+   ++ A+ L E M  +G 
Sbjct: 251 ARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGC 310

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
            P+ I Y  +++G CK+G L  A+E F +ML  G  P+ + Y++ I    K      A +
Sbjct: 311 EPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALK 370

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           +  +ML     P+++ Y  +V GLCK+G  +EA  L+  M   G  P+ +TYT++I    
Sbjct: 371 VLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFG 430

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
           + G + R  +L   M  KG +P  +TY VLI+   A G L+ A     EM+      ++ 
Sbjct: 431 KAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIG 490

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
            Y  +I G         + GL  ++ E+G +P    Y +LI+    AG  + AL L++E 
Sbjct: 491 MYRKVIEGFS--HEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEE- 547

Query: 690 LDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLGAE 729
                           L      Y+   V  +ESLTL  +
Sbjct: 548 ----------------LSSFSAAYQNTYVSLIESLTLACK 571



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/357 (30%), Positives = 171/357 (47%), Gaps = 23/357 (6%)

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M+ +   P  + +N+L++ YCRSG+   A+ L  ++      P  V YN LI G+C   D
Sbjct: 2   MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61

Query: 434 LE------VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           L       +A++    M+  G++ + +         C +G    A     EM+ KG  PD
Sbjct: 62  LPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPD 121

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              Y+  I          +A++L +EM   G  PD+ TY  L+   CK+G +E+A     
Sbjct: 122 SSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFD 181

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
           +M  DG  P+ +TYT++IHA L+   L R  ++F  ML  G  P +VTYT LI  H   G
Sbjct: 182 EMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAG 241

Query: 608 RLELAFMYFSEMQVKGI-----------------RPNVITYNALINGLCRLRRIDQAYGL 650
             E A   ++ M+   +                  PNV+TY AL++GLC+  ++ +A  L
Sbjct: 242 ETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDL 301

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLK 707
              M  EG  PN+  Y  LI+  C  G   EA  ++ +ML     P+  T+S+L+ K
Sbjct: 302 LETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDK 358



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 90/327 (27%), Positives = 141/327 (43%), Gaps = 41/327 (12%)

Query: 160 DVLIGGGLSSCVSIKIL-DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRII-KV 217
           D+L    L  C   +I+ D L+  + K   +++   VF KML +G  P+V   + +I K+
Sbjct: 300 DLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKL 359

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
            +D    +  + + +M+ E    P++V Y  M+D  CK G+  EA  L+  M+ +GC PN
Sbjct: 360 FKDKRLDLALKVLTKML-ENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPN 418

Query: 278 GVTYNVLITGFSRNGELEQA-------------------RGLIRDMLKLGLKVSAHS--- 315
            VTY  +I GF + G +++                    R LI      GL   AH    
Sbjct: 419 VVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLE 478

Query: 316 -------------YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
                        Y  +I G+S +   V +L L  E+   G  P L  Y +LI    K G
Sbjct: 479 EMKQTYWPKHIGMYRKVIEGFSHE--FVASLGLLAELSEDGSVPILPVYKLLIDNFIKAG 536

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R+  A     E L         +Y +L+     +  + +AF L+ ++  R  VP +    
Sbjct: 537 RLEMAL-ELHEELSSFSAAYQNTYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLV 595

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGI 449
            LI GL R G  E A QL +++    I
Sbjct: 596 CLIKGLLRVGKWEEALQLSDSICQMDI 622


>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
 gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
          Length = 643

 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 167/611 (27%), Positives = 294/611 (48%), Gaps = 19/611 (3%)

Query: 117 QPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKIL 176
           + G + D + + +++   + +G  R A  V + +      G    LI             
Sbjct: 26  KDGFEPDVYAYTSLITACVSNGRYREAVMVFKKM---EEEGCKPTLI-----------TY 71

Query: 177 DLLLLIYTKKSMV-EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
           +++L +Y K  M   +   +F  M   G+LPD    N +I   R      +A  V+  M 
Sbjct: 72  NVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEEAAAVFEDMK 131

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
             G  P  VTYNT+LD + K   ++EA+E+L EM+  GCSP+ VTYN LI+ ++R+G LE
Sbjct: 132 SMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLE 191

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
           +A  L   M++ G+K+   +Y  ++ G+   G    A+ + EEM T G  P + T+N LI
Sbjct: 192 EAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALI 251

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
                 G+ ++    F E+     +PDI+++NTLL  + ++G   E   +F E++    V
Sbjct: 252 KMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFV 311

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P   TYNTLI    R G  + A  + + M++ GI PD+ TY  ++    + G    + + 
Sbjct: 312 PERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSEKI 371

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD--LITYNVLVHGL 533
             EM     +P+   + + +       +      L EE+ +    P   L+   VLV+  
Sbjct: 372 LAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSK 431

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
           C L  L EA     ++   GF PD  T  ++I        + +  ++ N M   G +P+L
Sbjct: 432 CDL--LLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSL 489

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
            TY  L++ H+     E +     E+  KGI+P++I+YN +I   CR  R+ +A  +F +
Sbjct: 490 ATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSE 549

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDY 713
           M E G++P+  TY   +        ++EA+ +   M+    +P+  T+++++      + 
Sbjct: 550 MRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDGYCKLNR 609

Query: 714 KVHAVEYLESL 724
           +  A++++ SL
Sbjct: 610 RDDAIKFISSL 620



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 131/529 (24%), Positives = 241/529 (45%), Gaps = 36/529 (6%)

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
           II +L   G    A  +   + + G +P +  Y +++ +    G  +EA+ +  +M+  G
Sbjct: 4   IINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEEG 63

Query: 274 CSPNGVTYNVL-------------ITGF----------------------SRNGEL-EQA 297
           C P  +TYNV+             ITG                        R G L E+A
Sbjct: 64  CKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEEA 123

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             +  DM  +G      +YN ++  Y +   + EA+ +  EM   G +P++ TYN LI  
Sbjct: 124 AAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISA 183

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
             + G + +A     +M+ + +  D+ +Y  +L G+ R+G    A  +F+E+R+    P 
Sbjct: 184 YARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPN 243

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           + T+N LI      G      ++ E +     +PD++T+  ++    + G  S     F 
Sbjct: 244 ICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFK 303

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           EM R G  P+R  Y T I+   + G   +A  + + ML  G  PDL TYN ++  L + G
Sbjct: 304 EMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGG 363

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
             E++ ++L +M      P+ +T+ S++HA     ++ R   L   +    + P  V   
Sbjct: 364 LWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLK 423

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
            L+  ++    L  A   F E++ KG  P++ T NA+I    R + + +   +   M+E 
Sbjct: 424 TLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKES 483

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
           G  P+  TY  L+  +  + N++ +  + KE+L + I+PD  +++ ++ 
Sbjct: 484 GFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIF 532



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 122/429 (28%), Positives = 211/429 (49%), Gaps = 8/429 (1%)

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
           V+I    + G++  A  L+ ++ K G +   ++Y  +I      G   EA+ + ++M   
Sbjct: 3   VIINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEE 62

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFE-MLRKNVIPDIISYNTLLYGYCRSGNI-G 400
           G  PTL TYN+++    K G   +     FE M    ++PD  +YNTL+   CR G++  
Sbjct: 63  GCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLI-TCCRRGSLYE 121

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           EA  +F++++S   VP  VTYNTL+D   +   ++ A ++   M   G  P ++TY  ++
Sbjct: 122 EAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLI 181

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
           +   + G L  A E  N+M+ +G++ D F YT  ++G ++ G    A R+ EEM   G  
Sbjct: 182 SAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCK 241

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           P++ T+N L+      G   E  ++  ++     +PD +T+ +++    + G       +
Sbjct: 242 PNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGV 301

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
           F  M R G  P   TY  LI A++  G  + A   +  M   GI P++ TYNA++  L R
Sbjct: 302 FKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALAR 361

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
               +Q+  +  +M++    PN+ T+  L++   N       L L +E+    IEP    
Sbjct: 362 GGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEP---- 417

Query: 701 HSALLLKQL 709
             A+LLK L
Sbjct: 418 -HAVLLKTL 425



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 79/155 (50%), Gaps = 2/155 (1%)

Query: 158 ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
           IL+ +   G +   S+   + L+ ++++    E+   V  ++L  G+ PD+ + N +I  
Sbjct: 476 ILNFMKESGFTP--SLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFA 533

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
              NG   +A  ++  M E G+ P ++TYNT + S+  +   +EA++++  M   GC PN
Sbjct: 534 YCRNGRMKEASHIFSEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPN 593

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
             TYN +I G+ +    + A   I  + +L   +S
Sbjct: 594 QNTYNSVIDGYCKLNRRDDAIKFISSLHELDPHIS 628


>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
          Length = 704

 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 167/567 (29%), Positives = 277/567 (48%), Gaps = 38/567 (6%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           VF + + +G        N + K++R     + A   YR M E     + V+ + +L+ + 
Sbjct: 60  VFQQAVDSGSSLAFAGSNLMAKLVRSRNHEL-AFSFYRKMLETDTFINFVSLSGLLECYV 118

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           +  +   A  +L  M  RG + N   +N+L+ G  RN E  +A  L+R+M +  L     
Sbjct: 119 QMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVF 178

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           SYN +I G+ E   L +AL L  EM   G + +L T+ ILI   CK G++ +A     EM
Sbjct: 179 SYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEM 238

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
               +  D++ Y +L+ G+C  G +     LFDE+  R   P  +TYNTLI G C+ G L
Sbjct: 239 KFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQL 298

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A ++ E MI +G+ P+V TYT +++G C +G    A +  N M+ K  +P+   Y   
Sbjct: 299 KEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNII 358

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I    K G  ++A  + E M  +   PD ITYN+L+ GLC  G L+EA++LL  M+ D  
Sbjct: 359 INKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSS 418

Query: 555 I--PDHITYTSIIH-----------------------------------ASLEMGDLRRG 577
              PD I+Y ++IH                                   ++L+ GD+ + 
Sbjct: 419 YTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKA 478

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
            +L+  +    +     TYT +I      G L +A     +M+V  ++P+V  YN L++ 
Sbjct: 479 MELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSS 538

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           LC+   +DQA+ LF +M+ +   P+  ++ I+I+ +  AG+ + A  L   M    + PD
Sbjct: 539 LCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPD 598

Query: 698 YCTHSALLLKQLDKDYKVHAVEYLESL 724
             T+S L+ + L   Y   A+ + + +
Sbjct: 599 LFTYSKLINRFLKLGYLDEAISFFDKM 625



 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 153/505 (30%), Positives = 253/505 (50%), Gaps = 2/505 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +  +M RN L+PDV + N +I+   +     KA E+   M   G   S+VT+  ++D+FC
Sbjct: 164 LLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFC 223

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K G+M EA+  L EM+  G   + V Y  LI GF   GEL++ + L  ++L+ G    A 
Sbjct: 224 KAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAI 283

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +YN +I G+ + G L EA  + E M+ RGV P + TY  LI GLC  G+  +A      M
Sbjct: 284 TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLM 343

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           + K+  P+ ++YN ++   C+ G + +A  + + ++ R   P  +TYN L+ GLC  GDL
Sbjct: 344 IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDL 403

Query: 435 EVAQQLKENMINQGIL--PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
           + A +L   M+       PDVI+Y  +++G CK   L  A + ++ ++ K    DR    
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTN 463

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
             +   LK GD ++A  L +++       +  TY  ++ G CK G L  A  LL KM   
Sbjct: 464 ILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVS 523

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
              P    Y  ++ +  + G L +   LF  M R    P +V++ ++I      G ++ A
Sbjct: 524 ELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSA 583

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
                 M   G+ P++ TY+ LIN   +L  +D+A   F  M + G  P+ +    ++  
Sbjct: 584 ESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKY 643

Query: 673 NCNAGNWQEALRLYKEMLDREIEPD 697
             + G   +   L K+++D++I  D
Sbjct: 644 CISQGETDKLTELVKKLVDKDIVLD 668



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 128/416 (30%), Positives = 216/416 (51%), Gaps = 2/416 (0%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +L+  + K   +++ +    +M   GL  D+     +I+   D G   + + ++  + E 
Sbjct: 217 ILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLER 276

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G  P  +TYNT++  FCK G+++EA E+   M  RG  PN  TY  LI G    G+ ++A
Sbjct: 277 GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEA 336

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
              +  M++   + +A +YN II    + GL+ +A+ + E M  R   P   TYNIL+ G
Sbjct: 337 LQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGG 396

Query: 358 LCKWGRVSDARHRFFEMLRKN--VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
           LC  G + +A    + ML+ +    PD+ISYN L++G C+   + +A  ++D L  +   
Sbjct: 397 LCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGA 456

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
              VT N L++   + GD+  A +L + + +  I+ +  TYT M++G CK G L++A+  
Sbjct: 457 GDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGL 516

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
             +M    LQP  F Y   ++   K G   +A+RL EEM      PD++++N+++ G  K
Sbjct: 517 LCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLK 576

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
            G ++ A  LL  M   G  PD  TY+ +I+  L++G L      F+ M+  G  P
Sbjct: 577 AGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEP 632



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/421 (30%), Positives = 206/421 (48%), Gaps = 3/421 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F+++L  G  P     N +I+     G   +A E++  M E G++P++ TY  ++D  C
Sbjct: 269 LFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLC 328

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
             G+ +EAL+ L  M  +   PN VTYN++I    ++G +  A  ++  M K   +    
Sbjct: 329 GVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNI 388

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRG--VAPTLATYNILIYGLCKWGRVSDARHRFF 372
           +YN ++ G   KG L EA  L   M+       P + +YN LI+GLCK  R+  A   + 
Sbjct: 389 TYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYD 448

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
            ++ K    D ++ N LL    ++G++ +A  L+ ++    +V    TY  +IDG C+ G
Sbjct: 449 LLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTG 508

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
            L VA+ L   M    + P V  Y  +++  CK G+L  A   F EM R    PD  ++ 
Sbjct: 509 MLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFN 568

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
             I G LK GD   A  L   M   G  PDL TY+ L++   KLG L+EA     KMV  
Sbjct: 569 IMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDS 628

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS-PTLVTYTVLIHAHAARGRLEL 611
           GF PD     S++   +  G+  +  +L   ++ K +     +T TV+ +   +   ++L
Sbjct: 629 GFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDL 688

Query: 612 A 612
           A
Sbjct: 689 A 689



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/293 (21%), Positives = 121/293 (41%), Gaps = 36/293 (12%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K++ + Q L +++ ++      D    N ++      G   KA E+++ + +  I  +  
Sbjct: 436 KENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSD 495

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY  M+D FCK G +  A  LL +M+     P+   YN L++   + G L+QA  L    
Sbjct: 496 TYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLF--- 552

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
                                           EEM      P + ++NI+I G  K G +
Sbjct: 553 --------------------------------EEMQRDNNFPDVVSFNIMIDGSLKAGDI 580

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
             A      M R  + PD+ +Y+ L+  + + G + EA   FD++      P     +++
Sbjct: 581 KSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSV 640

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDV-ITYTIMVNGSCKMGNLSMAREFF 476
           +      G+ +   +L + ++++ I+ D  +T T+M        N+ +A+   
Sbjct: 641 LKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLL 693



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 65/138 (47%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K  M+     +  KM  + L P V + N ++  L   G   +A  ++  M      P 
Sbjct: 504 FCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPD 563

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +V++N M+D   K G+++ A  LL  M   G SP+  TY+ LI  F + G L++A     
Sbjct: 564 VVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFD 623

Query: 303 DMLKLGLKVSAHSYNPII 320
            M+  G +  AH  + ++
Sbjct: 624 KMVDSGFEPDAHICDSVL 641



 Score = 43.9 bits (102), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 58/127 (45%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL    K+  ++Q   +F +M R+   PDV + N +I      G    A  +   M   G
Sbjct: 535 LLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAG 594

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           + P + TY+ +++ F K G + EA+    +M   G  P+    + ++      GE ++  
Sbjct: 595 LSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLT 654

Query: 299 GLIRDML 305
            L++ ++
Sbjct: 655 ELVKKLV 661


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 156/522 (29%), Positives = 272/522 (52%), Gaps = 11/522 (2%)

Query: 196 FNKMLR-NGLLPDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
           FN +L  N   P +   N+I+  L + N F + A    + M   GI+P + T+N +++ F
Sbjct: 40  FNHILHMNNHTPPIFEFNKILSSLVKMNHFKI-AISFSQQMELKGIQPEMFTFNILINCF 98

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
               ++  A  ++ ++   G  P+ VT N L+ G   NG++++A      +++    +  
Sbjct: 99  SHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQ 158

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRG---VAPTLATYNILIYGLCKWGRVSDARHR 370
            SY  +I G  + G    AL L  ++   G   V P +  Y  +I   CK   V DA   
Sbjct: 159 VSYGTLINGLCKSGETRAALQLLRKI--EGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDL 216

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
           + EM+ K + P+++++N+L+YG+C  G + EA  L +E+   N+ P V T+N LIDGLC+
Sbjct: 217 YSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCK 276

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
            G+++ A  +   MI QG+ P+V+TYT +++G   +  ++ A+  FN +  +G+ P+  +
Sbjct: 277 EGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHS 336

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           Y+  I G  K     EA +L +EM  K   P+ +TY+ L+ GLCK G + +  +L+ ++ 
Sbjct: 337 YSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEIN 396

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
             G   + ITY S+++   +   + +   L   M  +G+ P + TYT L+      GRL+
Sbjct: 397 NRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLK 456

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
            A   + ++  KG   N+  Y  +INGLC+    D+A  L   ME+ G +P+  TY  LI
Sbjct: 457 DAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLI 516

Query: 671 NENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
           +         +A++L +EM+ RE +   C+      ++ DKD
Sbjct: 517 SALFKNNKNGKAVKLLREMIARESD---CSGKEQSREKKDKD 555



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 139/489 (28%), Positives = 254/489 (51%), Gaps = 9/489 (1%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P I  +N +L S  K    + A+    +M+ +G  P   T+N+LI  FS   +L  A  +
Sbjct: 51  PPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSM 110

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  +LKLG +    + N ++ G    G + EALN  + ++ +       +Y  LI GLCK
Sbjct: 111 VAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCK 170

Query: 361 WGRVSDARHRFFEMLRKN-----VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
            G    A     ++LRK      V PD+I Y  ++  +C+   + +A+ L+ E+  + + 
Sbjct: 171 SGETRAA----LQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIY 226

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P VVT+N+LI G C  G L+ A  L   M    + P+V T+ I+++G CK G +  A   
Sbjct: 227 PNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSV 286

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
            + M+++G++P+   YT+ + G   + + ++A  +   +  +G  P++ +Y+V+++GLCK
Sbjct: 287 LSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCK 346

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
              ++EA +L ++M      P+ +TY+S+I    + G +    DL + +  +G    ++T
Sbjct: 347 NKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIIT 406

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           Y  L++      +++ A    ++M+ +GI+P++ TY  L++GLC+  R+  A  ++ D+ 
Sbjct: 407 YNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLL 466

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKV 715
            +G   N   YT++IN  C  G + EAL L  +M D    PD  T+  L+      +   
Sbjct: 467 CKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNG 526

Query: 716 HAVEYLESL 724
            AV+ L  +
Sbjct: 527 KAVKLLREM 535



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 138/464 (29%), Positives = 250/464 (53%), Gaps = 16/464 (3%)

Query: 105 RIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIG 164
           +IA+ F + +E + G++ + F F  ++        L  A+ +V  ++ +           
Sbjct: 70  KIAISFSQQMELK-GIQPEMFTFNILINCFSHLCQLNFAFSMVAKILKL----------- 117

Query: 165 GGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS 224
           G     V++  L   L +  K   V++ L   + ++R     D  +   +I  L  +G +
Sbjct: 118 GYQPDTVTVNTLLRGLCLNGK---VKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGET 174

Query: 225 VKAREVYRMM-GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNV 283
             A ++ R + G   ++P ++ Y  ++DSFCK+  + +A +L  EM  +   PN VT+N 
Sbjct: 175 RAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNS 234

Query: 284 LITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG 343
           LI GF   G+L++A GL+ +M    +  + +++N +I G  ++G + +A ++   M+ +G
Sbjct: 235 LIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQG 294

Query: 344 VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF 403
           V P + TY  L+ G      V+ A+H F  +  + V P++ SY+ ++ G C++  + EA 
Sbjct: 295 VEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAV 354

Query: 404 LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
            LF E+  +N+ P  VTY++LIDGLC+ G +     L + + N+G   ++ITY  ++NG 
Sbjct: 355 KLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGL 414

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
           CK   +  A     +M  +G+QPD   YTT + G  K G   +A R+ +++L KG+P ++
Sbjct: 415 CKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNI 474

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
             Y V+++GLCK G  +EA  LL +M  +G +PD +TY ++I A
Sbjct: 475 RMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISA 518



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 100/196 (51%), Gaps = 6/196 (3%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF---GIKP 241
           K  MV++ + +F +M    + P+    + +I  L  +G   +  +V+ ++ E    G   
Sbjct: 346 KNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSG---RISDVWDLIDEINNRGQPA 402

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
           +I+TYN++L+  CK  ++ +A+ LL +M+  G  P+  TY  L+ G  +NG L+ A+ + 
Sbjct: 403 NIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIY 462

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
           +D+L  G  ++   Y  +I G  ++G   EAL+L  +M   G  P   TY  LI  L K 
Sbjct: 463 QDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKN 522

Query: 362 GRVSDARHRFFEMLRK 377
            +   A     EM+ +
Sbjct: 523 NKNGKAVKLLREMIAR 538


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 150/498 (30%), Positives = 236/498 (47%), Gaps = 35/498 (7%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V   +   G   DV NCN ++  + D G   KA  + R +  FG +P +V+YN +L   C
Sbjct: 179 VLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLC 238

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
                    EL+ EM    C PN VT+N LI+   RNG  E+   ++             
Sbjct: 239 MAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVL------------- 285

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
                                  +M   G  P +  Y  +I G+CK G +  A      M
Sbjct: 286 ----------------------AQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRM 323

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
               + P+++ YNTLL G C +    E   L  E+  ++     VT+N L+D  C+ G +
Sbjct: 324 PSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLV 383

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           +   +L E M+  G +PDVITYT ++NG CK G +  A      M   G +P+  +YT  
Sbjct: 384 DRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIV 443

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           + G        +A  L  +M+ +G P + IT+N L++ LCK G +E+A ELL++M+ +G 
Sbjct: 444 LKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGC 503

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            PD I+Y+++I    + G      +L N M+ KG+SP  + Y+ +  A +  GR+     
Sbjct: 504 SPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQ 563

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F  +Q   IR + + YNA+I+ LC+    ++A      M   G +PN+ TYTILI    
Sbjct: 564 MFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLA 623

Query: 675 NAGNWQEALRLYKEMLDR 692
           + G  +EA  +  E+  +
Sbjct: 624 SEGFVKEAQEMLTELCSK 641



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 137/473 (28%), Positives = 228/473 (48%), Gaps = 4/473 (0%)

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           YN M+  +C+ G+++ A  L   +      PN  TY  ++      G +  A  ++ +M 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
           + G       Y+ I+      G    A+ + E++  RG A  +   N+++  +C  G V 
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
            A H   ++      PD++SYN +L G C +   G    L +E+      P +VT+NTLI
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
             LCR G  E   ++   M   G  PD+  Y  +++G CK G+L +A E  N M   GL+
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLK 329

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           P+   Y T + G        E   L  EM  K  P D +T+N+LV   C+ G ++   EL
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
           L +M+  G +PD ITYT++I+   + G +     L  +M   G  P  ++YT+++    +
Sbjct: 390 LEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 449

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
             R   A    S+M  +G   N IT+N LIN LC+   ++QA  L   M   G  P+  +
Sbjct: 450 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLIS 509

Query: 666 YTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAV 718
           Y+ +I+    AG   EAL L   M+++ + P+   +S+ +   L ++ +++ V
Sbjct: 510 YSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSS-IASALSREGRINKV 561



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 198/388 (51%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           +I   + L+    +  + E+   V  +M  +G  PD++    II  +   G    A E+ 
Sbjct: 261 NIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEIL 320

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M  +G+KP++V YNT+L   C     +E  ELL EM  + C  + VT+N+L+  F +N
Sbjct: 321 NRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQN 380

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G +++   L+  ML  G      +Y  +I G+ ++GL+ EA+ L + M   G  P   +Y
Sbjct: 381 GLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISY 440

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
            I++ GLC   R  DA     +M+++    + I++NTL+   C+ G + +A  L  ++  
Sbjct: 441 TIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLV 500

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
               P +++Y+T+IDGL + G  + A +L   M+N+G+ P+ I Y+ + +   + G ++ 
Sbjct: 501 NGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINK 560

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
             + F+ +    ++ D   Y   I+   K G+T  A      M++ G  P+  TY +L+ 
Sbjct: 561 VIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIR 620

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHI 559
           GL   G ++EA E+L ++   G +  H+
Sbjct: 621 GLASEGFVKEAQEMLTELCSKGALRKHL 648



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 110/409 (26%), Positives = 184/409 (44%), Gaps = 3/409 (0%)

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           YN ++ GY   G L  A  L   +    V P   TY  ++  LC  GR++DA     EM 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
           R+   P    Y+ +L   CR G    A  + ++L +R     V   N +++ +C  G ++
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            A  L  ++ + G  PDV++Y  ++ G C        +E   EM+R    P+   + T I
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
           +   + G     + +  +M   G  PD+  Y  ++ G+CK G L+ A+E+L +M   G  
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLK 329

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           P+ + Y +++             +L   M  K      VT+ +L+      G ++     
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
             +M V G  P+VITY  +ING C+   ID+A  L   M   G  PN  +YTI++   C+
Sbjct: 390 LEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 449

Query: 676 AGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           A  W +A  L  +M+ +    +  T + L+     K     A+E L+ +
Sbjct: 450 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQM 498


>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 605

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 159/534 (29%), Positives = 269/534 (50%), Gaps = 17/534 (3%)

Query: 199 MLRNGLLPDVKNCNRIIKVL-----RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
           M R  L P++   N +IK L     + + +  KA  ++  + + G++ +  T+N ++   
Sbjct: 1   MKRLHLKPNLLTLNTLIKALVRYPSKPSVYLSKA--IFSDVIKLGVEVNTNTFNILICGC 58

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           C E ++ EA+ L+ +M+   C P+ V+YN ++    + G+L +AR L+ DM   GL  + 
Sbjct: 59  CIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNR 118

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
           +++N ++ GY + G L EA  + + M    V P + TY  LI GLCK G++ +A     E
Sbjct: 119 NTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDE 178

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M    ++P +++YN L+ G     +  + F L DE+  + + P  VTYN ++    + G 
Sbjct: 179 MENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGK 238

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           ++ A      M   G  PD +T+  + NG CK G LS A    +EM RKGL+ +     T
Sbjct: 239 MDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNT 298

Query: 494 ---QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
               + GE KL D   AY+L      +G+  D ++Y  L+ G  K+G     +E+  K +
Sbjct: 299 ILHTLCGERKLDD---AYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDEMKEKEI 355

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
               IP  ITY ++I      G   +  D  N +L  GL P   TY  +I  +   G+++
Sbjct: 356 ----IPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVD 411

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
            AF + ++M  K  +P++ T N L+ GLC    +D+A  LF     +G   +  T+  +I
Sbjct: 412 KAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTII 471

Query: 671 NENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           +  C  G ++EA  L  EM ++++ PD  TH+A+L    D      A E++  +
Sbjct: 472 SGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGI 525



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 153/558 (27%), Positives = 264/558 (47%), Gaps = 27/558 (4%)

Query: 171 VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV 230
           V+    ++L+     ++ + + + +  KM      PD  + N I+ VL   G   +AR++
Sbjct: 46  VNTNTFNILICGCCIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDL 105

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
              M   G+ P+  T+N ++  +CK G ++EA E++  M      P+  TY  LI G  +
Sbjct: 106 LLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCK 165

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
           +G++++A  L  +M  L L     +YN +I G  E    ++   L +EM  +GV P   T
Sbjct: 166 DGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVT 225

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           YN+++    K G++ +A +   +M      PD +++NTL  GYC++G + EAF + DE+ 
Sbjct: 226 YNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMS 285

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
            + L    VT NT++  LC    L+ A +L  +   +G   D ++Y  ++ G  K+G   
Sbjct: 286 RKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGK-- 343

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
                ++EM  K + P    Y T I G  + G T ++     E+L  G  PD  TYN ++
Sbjct: 344 --SXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTII 401

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
            G C+ G +++A     KMV   F PD  T   ++      G L +   LF   + KG +
Sbjct: 402 LGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKA 461

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
              VT+  +I      GR E AF   +EM+ K + P+  T+NA+++ L    R+ +A   
Sbjct: 462 IDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEF 521

Query: 651 FIDMEEEGIL-----------------------PNKYTYTILINENCNAGNWQEALRLYK 687
              + E+G L                       PN   ++  INE C  G +++A+ + +
Sbjct: 522 MSGIVEQGKLQDQTISLNKRKTESSSETSQESDPNSVAFSEQINELCTQGKYKDAMHMIQ 581

Query: 688 EMLDREIEPDYCTHSALL 705
           E   + I     T+ +L+
Sbjct: 582 ESTQKGIILHKSTYISLM 599



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/437 (25%), Positives = 206/437 (47%), Gaps = 54/437 (12%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   +++   + ++M    LLP V   N +I    +   S+K  E+   M   G+KP+ V
Sbjct: 165 KDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAV 224

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TYN ++  + KEG+M  A   L +M+  G SP+ VT+N L  G+ + G L +A  ++ +M
Sbjct: 225 TYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEM 284

Query: 305 LKLGLKVSAHSYNPII---CG-------------YSEKGLLVEALNLE------------ 336
            + GLK+++ + N I+   CG              S++G  V+ ++              
Sbjct: 285 SRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKS 344

Query: 337 ---EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
              +EM  + + P++ TY  +I GLC+ G+   +  +  E+L   ++PD  +YNT++ GY
Sbjct: 345 XXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGY 404

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
           CR G + +AF   +++  ++  P + T N L+ GLC  G L+ A +L +  I++G   D 
Sbjct: 405 CREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDA 464

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
           +T+  +++G C+ G    A +   EM  K L PD + +   ++     G   EA      
Sbjct: 465 VTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSG 524

Query: 514 MLAKG-----------------------FPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           ++ +G                         P+ + ++  ++ LC  G  ++A  ++++  
Sbjct: 525 IVEQGKLQDQTISLNKRKTESSSETSQESDPNSVAFSEQINELCTQGKYKDAMHMIQEST 584

Query: 551 GDGFIPDHITYTSIIHA 567
             G I    TY S++  
Sbjct: 585 QKGIILHKSTYISLMEG 601


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 142/394 (36%), Positives = 212/394 (53%), Gaps = 6/394 (1%)

Query: 279 VTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
            T+N+++      G+  +A  L+R M +     +A +YN +I G+  +G +  AL++  E
Sbjct: 489 TTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMRE 544

Query: 339 MVTRG-VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN-VIPDIISYNTLLYGYCRS 396
           M  RG +AP   TY  +I G CK GRV +A   F EML K  V P+ + YN L+ GYC  
Sbjct: 545 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 604

Query: 397 GNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
           G +  A L  D +  R +  TV TYN L+  L   G    A +L E M  +G+ PDV TY
Sbjct: 605 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 664

Query: 457 TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA 516
            I++NG CK GN+  A E F  M R+G++     YT  I    K G   E  +L +E + 
Sbjct: 665 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 724

Query: 517 KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
           +G  PDL+ YN L++     G+++ A E++ +M      PD +TY +++     +G +  
Sbjct: 725 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 784

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
            R L + M  +G+ P LVTY  LI  ++ +G ++ A    +EM  KG  P ++TYNALI 
Sbjct: 785 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 844

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
           GLC+  + D A  +  +M E GI P+  TY  LI
Sbjct: 845 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 878



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 142/413 (34%), Positives = 219/413 (53%), Gaps = 56/413 (13%)

Query: 192 CLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLD 251
           C   FN MLR+               L   G   +A E+ R M     +P+ VTYNT++ 
Sbjct: 487 CTTTFNIMLRH---------------LCSAGKPARALELLRQMP----RPNAVTYNTVIA 527

Query: 252 SFCKEGEMQEALELLWEMQGRG-CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG-L 309
            FC  G +Q AL+++ EM+ RG  +PN  TY  +I+G+ + G +++A  +  +ML  G +
Sbjct: 528 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 587

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
           K  A  YN +I GY ++G L  AL   + MV RGVA T+ATYN+L++ L   GR ++A  
Sbjct: 588 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 647

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
              EM  K + PD+ +YN L+ G+C+ GN+ +A  +F+ +  R +  TVVTY  LI  L 
Sbjct: 648 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 707

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVN---------------------------- 461
           + G ++   +L +  + +GI PD++ Y  ++N                            
Sbjct: 708 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 767

Query: 462 -------GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
                  G C +G +  AR+  +EM  +G+QPD   Y T I+G    GD  +A R++ EM
Sbjct: 768 TYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 827

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
           + KGF P L+TYN L+ GLCK G  ++A  ++++MV +G  PD  TY S+I  
Sbjct: 828 MNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 880



 Score =  241 bits (616), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 138/397 (34%), Positives = 215/397 (54%), Gaps = 6/397 (1%)

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
            T+N ML   C  G+   ALELL +M      PN VTYN +I GF   G ++ A  ++R+
Sbjct: 489 TTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMRE 544

Query: 304 ML-KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG-VAPTLATYNILIYGLCKW 361
           M  + G+  + ++Y  +I G+ + G + EA+ + +EM+T+G V P    YN LI G C  
Sbjct: 545 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 604

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           G++  A      M+ + V   + +YN L++     G   EA+ L +E+  + L P V TY
Sbjct: 605 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 664

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           N LI+G C+ G+++ A ++ ENM  +G+   V+TYT ++    K G +    + F+E +R
Sbjct: 665 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 724

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
           +G++PD   Y   I      G+   A+ +  EM  K   PD +TYN L+ GLC LG ++E
Sbjct: 725 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 784

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A +L+ +M   G  PD +TY ++I      GD++    + N M+ KG +PTL+TY  LI 
Sbjct: 785 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 844

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
                G+ + A     EM   GI P+  TY +LI GL
Sbjct: 845 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 881



 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 131/404 (32%), Positives = 219/404 (54%), Gaps = 10/404 (2%)

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M  L L +S  S +P++           A  L  +M    +     T+NI++  LC  G+
Sbjct: 448 MKSLSLPISTASLHPLLSALPS----APAFALFADMFRLRLPLCTTTFNIMLRHLCSAGK 503

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN-LVPTVVTYN 422
            +    R  E+LR+   P+ ++YNT++ G+C  G +  A  +  E+R R  + P   TY 
Sbjct: 504 PA----RALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYG 559

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQG-ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           T+I G C+ G ++ A ++ + M+ +G + P+ + Y  ++ G C  G L  A  + + M+ 
Sbjct: 560 TVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE 619

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
           +G+      Y   +      G  +EAY L EEM  KG  PD+ TYN+L++G CK G++++
Sbjct: 620 RGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKK 679

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A E+   M   G     +TYT++I+A  + G ++    LF+  +R+G+ P LV Y  LI+
Sbjct: 680 ALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALIN 739

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
           +H+  G ++ AF    EM+ K I P+ +TYN L+ GLC L R+D+A  L  +M E GI P
Sbjct: 740 SHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQP 799

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +  TY  LI+     G+ ++ALR+  EM+++   P   T++AL+
Sbjct: 800 DLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALI 843



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 131/411 (31%), Positives = 206/411 (50%), Gaps = 6/411 (1%)

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  L  DM +L L +   ++N ++      G    AL L  +M      P   TYN +I 
Sbjct: 472 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 527

Query: 357 GLCKWGRVSDARHRFFEML-RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
           G C  GRV  A     EM  R  + P+  +Y T++ G+C+ G + EA  +FDE+ ++  V
Sbjct: 528 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 587

Query: 416 -PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P  V YN LI G C  G L+ A   ++ M+ +G+   V TY ++V+     G  + A E
Sbjct: 588 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 647

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
              EM  KGL PD F Y   I G  K G+  +A  + E M  +G    ++TY  L++ L 
Sbjct: 648 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 707

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           K G ++E ++L  + V  G  PD + Y ++I++    G++ R  ++   M +K ++P  V
Sbjct: 708 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 767

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           TY  L+      GR++ A     EM  +GI+P+++TYN LI+G      +  A  +  +M
Sbjct: 768 TYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 827

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             +G  P   TY  LI   C  G   +A  + KEM++  I PD  T+ +L+
Sbjct: 828 MNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 878



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/353 (32%), Positives = 184/353 (52%), Gaps = 2/353 (0%)

Query: 183 YTKKSMVEQCLLVFNKML-RNGLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMGEFGIK 240
           +  +  V+  L +  +M  R G+ P+      +I      G   +A +V+  M+ +  +K
Sbjct: 529 FCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVK 588

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P  V YN ++  +C +G++  AL     M  RG +    TYN+L+     +G   +A  L
Sbjct: 589 PEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYEL 648

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           + +M   GL     +YN +I G+ ++G + +AL + E M  RGV  T+ TY  LIY L K
Sbjct: 649 VEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSK 708

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G+V +    F E +R+ + PD++ YN L+  +  SGNI  AF +  E+  + + P  VT
Sbjct: 709 KGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 768

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YNTL+ GLC  G ++ A++L + M  +GI PD++TY  +++G    G++  A    NEM+
Sbjct: 769 YNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMM 828

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
            KG  P    Y   I G  K G   +A  + +EM+  G  PD  TY  L+ GL
Sbjct: 829 NKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 881



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 75/228 (32%), Positives = 124/228 (54%)

Query: 165 GGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS 224
           GG      +   ++L+  + K+  V++ L +F  M R G+   V     +I  L   G  
Sbjct: 653 GGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQV 712

Query: 225 VKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVL 284
            +  +++      GI+P +V YN +++S    G +  A E++ EM+ +  +P+ VTYN L
Sbjct: 713 QETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTL 772

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           + G    G +++AR LI +M + G++    +YN +I GYS KG + +AL +  EM+ +G 
Sbjct: 773 MRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGF 832

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
            PTL TYN LI GLCK G+  DA +   EM+   + PD  +Y +L+ G
Sbjct: 833 NPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 880



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 104/190 (54%), Gaps = 2/190 (1%)

Query: 171 VSIKILDLLLLIY--TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR 228
           V   ++    LIY  +KK  V++   +F++ +R G+ PD+   N +I     +G   +A 
Sbjct: 692 VRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAF 751

Query: 229 EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
           E+   M +  I P  VTYNT++   C  G + EA +L+ EM  RG  P+ VTYN LI+G+
Sbjct: 752 EIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGY 811

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
           S  G+++ A  +  +M+  G   +  +YN +I G  + G   +A N+ +EMV  G+ P  
Sbjct: 812 SMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDD 871

Query: 349 ATYNILIYGL 358
           +TY  LI GL
Sbjct: 872 STYISLIEGL 881



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 10/110 (9%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKA--REVYRMMGEF---GIKPSI 243
           V++   + ++M   G+ PD+   N +I     +G+S+K   ++  R+  E    G  P++
Sbjct: 782 VDEARKLIDEMTERGIQPDLVTYNTLI-----SGYSMKGDVKDALRIRNEMMNKGFNPTL 836

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           +TYN ++   CK G+  +A  ++ EM   G +P+  TY  LI G +   E
Sbjct: 837 LTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 886



 Score = 39.7 bits (91), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 37/76 (48%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y+ K  V+  L + N+M+  G  P +   N +I+ L  NG    A  + + M E GI P 
Sbjct: 811 YSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPD 870

Query: 243 IVTYNTMLDSFCKEGE 258
             TY ++++    E E
Sbjct: 871 DSTYISLIEGLTTEDE 886


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 150/429 (34%), Positives = 213/429 (49%), Gaps = 41/429 (9%)

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
            T+N ML   C  G+   ALELL +M      PN VTYN                     
Sbjct: 115 TTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNT-------------------- 150

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG-VAPTLATYNILIYGLCKWG 362
                          +I G+  +G +  AL++  EM  RG +AP   TY  +I G CK G
Sbjct: 151 ---------------VIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVG 195

Query: 363 RVSDARHRFFEMLRKN-VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           RV +A   F EML K  V P+ + YN L+ GYC  G +  A L  D +  R +  TV TY
Sbjct: 196 RVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATY 255

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           N L+  L   G    A +L E M  +G+ PDV TY I++NG CK GN+  A E F  M R
Sbjct: 256 NLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 315

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
           +G++     YT  I    K G   E  +L +E + +G  PDL+ YN L++     G+++ 
Sbjct: 316 RGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDR 375

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A E++ +M      PD +TY +++     +G +   R L + M  +G+ P LVTY  LI 
Sbjct: 376 AFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLIS 435

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
            ++ +G ++ A    +EM  KG  P ++TYNALI GLC+  + D A  +  +M E GI P
Sbjct: 436 GYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITP 495

Query: 662 NKYTYTILI 670
           +  TY  LI
Sbjct: 496 DDSTYISLI 504



 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 142/413 (34%), Positives = 219/413 (53%), Gaps = 56/413 (13%)

Query: 192 CLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLD 251
           C   FN MLR+               L   G   +A E+ R M     +P+ VTYNT++ 
Sbjct: 113 CTTTFNIMLRH---------------LCSAGKPARALELLRQMP----RPNAVTYNTVIA 153

Query: 252 SFCKEGEMQEALELLWEMQGRG-CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG-L 309
            FC  G +Q AL+++ EM+ RG  +PN  TY  +I+G+ + G +++A  +  +ML  G +
Sbjct: 154 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 213

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
           K  A  YN +I GY ++G L  AL   + MV RGVA T+ATYN+L++ L   GR ++A  
Sbjct: 214 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 273

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
              EM  K + PD+ +YN L+ G+C+ GN+ +A  +F+ +  R +  TVVTY  LI  L 
Sbjct: 274 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 333

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVN---------------------------- 461
           + G ++   +L +  + +GI PD++ Y  ++N                            
Sbjct: 334 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 393

Query: 462 -------GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
                  G C +G +  AR+  +EM  +G+QPD   Y T I+G    GD  +A R++ EM
Sbjct: 394 TYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 453

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
           + KGF P L+TYN L+ GLCK G  ++A  ++++MV +G  PD  TY S+I  
Sbjct: 454 MNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 506



 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 131/404 (32%), Positives = 219/404 (54%), Gaps = 10/404 (2%)

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M  L L +S  S +P++           A  L  +M    +     T+NI++  LC  G+
Sbjct: 74  MKSLSLPISTASLHPLLSALPS----APAFALFADMFRLRLPLCTTTFNIMLRHLCSAGK 129

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN-LVPTVVTYN 422
            +    R  E+LR+   P+ ++YNT++ G+C  G +  A  +  E+R R  + P   TY 
Sbjct: 130 PA----RALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYG 185

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQG-ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           T+I G C+ G ++ A ++ + M+ +G + P+ + Y  ++ G C  G L  A  + + M+ 
Sbjct: 186 TVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE 245

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
           +G+      Y   +      G  +EAY L EEM  KG  PD+ TYN+L++G CK G++++
Sbjct: 246 RGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKK 305

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A E+   M   G     +TYT++I+A  + G ++    LF+  +R+G+ P LV Y  LI+
Sbjct: 306 ALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALIN 365

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
           +H+  G ++ AF    EM+ K I P+ +TYN L+ GLC L R+D+A  L  +M E GI P
Sbjct: 366 SHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQP 425

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +  TY  LI+     G+ ++ALR+  EM+++   P   T++AL+
Sbjct: 426 DLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALI 469



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 131/411 (31%), Positives = 206/411 (50%), Gaps = 6/411 (1%)

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  L  DM +L L +   ++N ++      G    AL L  +M      P   TYN +I 
Sbjct: 98  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 153

Query: 357 GLCKWGRVSDARHRFFEML-RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
           G C  GRV  A     EM  R  + P+  +Y T++ G+C+ G + EA  +FDE+ ++  V
Sbjct: 154 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 213

Query: 416 -PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P  V YN LI G C  G L+ A   ++ M+ +G+   V TY ++V+     G  + A E
Sbjct: 214 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 273

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
              EM  KGL PD F Y   I G  K G+  +A  + E M  +G    ++TY  L++ L 
Sbjct: 274 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 333

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           K G ++E ++L  + V  G  PD + Y ++I++    G++ R  ++   M +K ++P  V
Sbjct: 334 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 393

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           TY  L+      GR++ A     EM  +GI+P+++TYN LI+G      +  A  +  +M
Sbjct: 394 TYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 453

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             +G  P   TY  LI   C  G   +A  + KEM++  I PD  T+ +L+
Sbjct: 454 MNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 504



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/353 (32%), Positives = 184/353 (52%), Gaps = 2/353 (0%)

Query: 183 YTKKSMVEQCLLVFNKML-RNGLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMGEFGIK 240
           +  +  V+  L +  +M  R G+ P+      +I      G   +A +V+  M+ +  +K
Sbjct: 155 FCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVK 214

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P  V YN ++  +C +G++  AL     M  RG +    TYN+L+     +G   +A  L
Sbjct: 215 PEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYEL 274

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           + +M   GL     +YN +I G+ ++G + +AL + E M  RGV  T+ TY  LIY L K
Sbjct: 275 VEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSK 334

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G+V +    F E +R+ + PD++ YN L+  +  SGNI  AF +  E+  + + P  VT
Sbjct: 335 KGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 394

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YNTL+ GLC  G ++ A++L + M  +GI PD++TY  +++G    G++  A    NEM+
Sbjct: 395 YNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMM 454

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
            KG  P    Y   I G  K G   +A  + +EM+  G  PD  TY  L+ GL
Sbjct: 455 NKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 507



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 75/228 (32%), Positives = 124/228 (54%)

Query: 165 GGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS 224
           GG      +   ++L+  + K+  V++ L +F  M R G+   V     +I  L   G  
Sbjct: 279 GGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQV 338

Query: 225 VKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVL 284
            +  +++      GI+P +V YN +++S    G +  A E++ EM+ +  +P+ VTYN L
Sbjct: 339 QETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTL 398

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           + G    G +++AR LI +M + G++    +YN +I GYS KG + +AL +  EM+ +G 
Sbjct: 399 MRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGF 458

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
            PTL TYN LI GLCK G+  DA +   EM+   + PD  +Y +L+ G
Sbjct: 459 NPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 506



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/180 (35%), Positives = 101/180 (56%), Gaps = 2/180 (1%)

Query: 181 LIY--TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LIY  +KK  V++   +F++ +R G+ PD+   N +I     +G   +A E+   M +  
Sbjct: 328 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 387

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           I P  VTYNT++   C  G + EA +L+ EM  RG  P+ VTYN LI+G+S  G+++ A 
Sbjct: 388 IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDAL 447

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            +  +M+  G   +  +YN +I G  + G   +A N+ +EMV  G+ P  +TY  LI GL
Sbjct: 448 RIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 507



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 10/110 (9%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKA--REVYRMMGEF---GIKPSI 243
           V++   + ++M   G+ PD+   N +I     +G+S+K   ++  R+  E    G  P++
Sbjct: 408 VDEARKLIDEMTERGIQPDLVTYNTLI-----SGYSMKGDVKDALRIRNEMMNKGFNPTL 462

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           +TYN ++   CK G+  +A  ++ EM   G +P+  TY  LI G +   E
Sbjct: 463 LTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 512



 Score = 39.3 bits (90), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 37/76 (48%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y+ K  V+  L + N+M+  G  P +   N +I+ L  NG    A  + + M E GI P 
Sbjct: 437 YSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPD 496

Query: 243 IVTYNTMLDSFCKEGE 258
             TY ++++    E E
Sbjct: 497 DSTYISLIEGLTTEDE 512


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 150/508 (29%), Positives = 252/508 (49%), Gaps = 2/508 (0%)

Query: 186 KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV-LRDNGFSVKAREVYRMMGEFGIKPSIV 244
           +  +   L V ++M R G  P     + I++   R  GF    R V   +   G    + 
Sbjct: 135 RGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVR-VLEDLHARGCALDVG 193

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
             N +L++ C +G + EAL LL ++   GC P+ V+YN ++ G          + L+ +M
Sbjct: 194 NCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEM 253

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           +++    +  ++N +I      GL      +  +MV  G  P +  Y  +I G+CK G +
Sbjct: 254 VRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHL 313

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
             A      M    + P+++ YNTLL G C +    E   L  E+  ++     VT+N L
Sbjct: 314 EVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNIL 373

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           +D  C+ G ++   +L E M+ +G +PDVITYT ++NG CK G +  A      M   G 
Sbjct: 374 VDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGC 433

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
           +P+  +YT  + G        +A  L  +M+ +G P + IT+N L++ LCK G +E+A E
Sbjct: 434 KPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIE 493

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           LL++M+ +G  PD I+Y+++I    + G      +L N M+ KG+SP  + Y+ +  A +
Sbjct: 494 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALS 553

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
             GR+      F  +Q   IR + + YNA+I+ LC+    ++A      M   G +PN+ 
Sbjct: 554 REGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNES 613

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDR 692
           TYTILI    + G  +EA  +  E+  +
Sbjct: 614 TYTILIRGLASEGFVKEAQEMLTELCSK 641



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 142/466 (30%), Positives = 228/466 (48%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V   +   G   DV NCN ++  + D G   +A  + R +  FG +P +V+YN +L   C
Sbjct: 179 VLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLC 238

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
                    EL+ EM    C PN VT+N LI+   RNG  E+   ++  M++ G      
Sbjct: 239 MAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIR 298

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
            Y  II G  ++G L  A  +   M + G+ P +  YN L+ GLC   R  +      EM
Sbjct: 299 MYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEM 358

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
             K+   D +++N L+  +C++G +     L +++  R  +P V+TY T+I+G C+ G +
Sbjct: 359 FDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLI 418

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A  L ++M   G  P+ I+YTI++ G C       A +  ++M+++G   +   + T 
Sbjct: 419 DEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTL 478

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I    K G   +A  L ++ML  G  PDLI+Y+ ++ GL K G  +EA ELL  MV  G 
Sbjct: 479 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGM 538

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            P+ I Y+SI  A    G + +   +F+N+    +    V Y  +I +   RG  E A  
Sbjct: 539 SPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIE 598

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
           + + M   G  PN  TY  LI GL     + +A  +  ++  +G L
Sbjct: 599 FLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 644



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 137/473 (28%), Positives = 230/473 (48%), Gaps = 4/473 (0%)

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           YN M+  +C+ G+++ A  L   +      PN  TY  ++      G +  A  ++ +M 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
           + G       Y+ I+      G    A+ + E++  RG A  +   N+++  +C  G V 
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
           +A H   ++      PD++SYN +L G C +   G    L +E+      P +VT+NTLI
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
             LCR G  E   ++   M+  G  PD+  Y  +++G CK G+L +A E  N M   GL+
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           P+   Y T + G        E   L  EM  K  P D +T+N+LV   C+ G ++   EL
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
           L +M+  G +PD ITYT++I+   + G +     L  +M   G  P  ++YT+++    +
Sbjct: 390 LEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 449

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
             R   A    S+M  +G   N IT+N LIN LC+   ++QA  L   M   G  P+  +
Sbjct: 450 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLIS 509

Query: 666 YTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAV 718
           Y+ +I+    AG   EAL L   M+++ + P+   +S+ +   L ++ +++ V
Sbjct: 510 YSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSS-IASALSREGRINKV 561



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 200/388 (51%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           +I   + L+    +  + E+   V  +M+ +G  PD++    II  +   G    A E+ 
Sbjct: 261 NIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEIL 320

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M  +G+KP++V YNT+L   C     +E  ELL EM  + C  + VT+N+L+  F +N
Sbjct: 321 NRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQN 380

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G +++   L+  ML+ G      +Y  +I G+ ++GL+ EA+ L + M   G  P   +Y
Sbjct: 381 GLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISY 440

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
            I++ GLC   R  DA     +M+++    + I++NTL+   C+ G + +A  L  ++  
Sbjct: 441 TIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLV 500

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
               P +++Y+T+IDGL + G  + A +L   M+N+G+ P+ I Y+ + +   + G ++ 
Sbjct: 501 NGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINK 560

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
             + F+ +    ++ D   Y   I+   K G+T  A      M++ G  P+  TY +L+ 
Sbjct: 561 VIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIR 620

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHI 559
           GL   G ++EA E+L ++   G +  H+
Sbjct: 621 GLASEGFVKEAQEMLTELCSKGALRKHL 648



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 110/409 (26%), Positives = 185/409 (45%), Gaps = 3/409 (0%)

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           YN ++ GY   G L  A  L   +    V P   TY  ++  LC  GR++DA     EM 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
           R+   P    Y+ +L   CR G    A  + ++L +R     V   N +++ +C  G ++
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            A  L  ++ + G  PDV++Y  ++ G C        +E   EM+R    P+   + T I
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
           +   + G     + +  +M+  G  PD+  Y  ++ G+CK G LE A+E+L +M   G  
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           P+ + Y +++             +L   M  K      VT+ +L+      G ++     
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
             +M  +G  P+VITY  +ING C+   ID+A  L   M   G  PN  +YTI++   C+
Sbjct: 390 LEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 449

Query: 676 AGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           A  W +A  L  +M+ +    +  T + L+     K     A+E L+ +
Sbjct: 450 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQM 498


>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Brachypodium distachyon]
          Length = 642

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 143/499 (28%), Positives = 246/499 (49%), Gaps = 5/499 (1%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           ++++ + LL    ++++V   + V++ M + G+ P+V   N +IK L  N     AR + 
Sbjct: 126 TVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRML 185

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M   G +P  V++ T++ + CK   + EA  +L EM     +P G +YN ++      
Sbjct: 186 DEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEM-----TPVGASYNAVVHALCGQ 240

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
             + +   ++ +M+  GL+    +Y  I+  + +   L  A  +   MVT G  P + T+
Sbjct: 241 FRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTF 300

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
            +L+ G    G+V DA   +  M+ +   P  ISYN L+ G C  G++  A  +F  +  
Sbjct: 301 TVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGK 360

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
            + +P V TY+TLIDG  + GDL+VA  +  +M N G  P+V+ YT MV+  CK      
Sbjct: 361 SDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQ 420

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A    ++M  +   P+   + T I     LG    A  +   M   G PP+  TYN L+H
Sbjct: 421 AENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLH 480

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           GL + G+ E+A  +L +M+  GF    ++Y + I    +M  ++    L   M+ +G+ P
Sbjct: 481 GLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQP 540

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
              T+  +IHA+   G +  A      M       N++ Y +L++GLC   ++D A    
Sbjct: 541 DAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYL 600

Query: 652 IDMEEEGILPNKYTYTILI 670
           + M  EGI PN+ T+ +L+
Sbjct: 601 LKMLYEGICPNEATWNVLV 619



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 133/491 (27%), Positives = 231/491 (47%), Gaps = 6/491 (1%)

Query: 200 LRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIK-PSIVTYNTMLDSFCKEGE 258
           LR    P+      I    R        +  YR   + G   P++  YN +LD+  +E  
Sbjct: 83  LRGVACPEGALVAAICAFARAGAADRALKTFYRARHDLGCAAPTVRVYNHLLDALLRENL 142

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           +   + +   M+  G  PN  TYN+LI    +N  +  AR ++ +M + G +    S+  
Sbjct: 143 VAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTT 202

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           II    +   L EA  +  EM      P  A+YN +++ LC   R+ +      EM+ + 
Sbjct: 203 IISALCKLDRLDEARGILAEMT-----PVGASYNAVVHALCGQFRMREVFLVVDEMVHRG 257

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
           + PD ++Y +++  +C++  +  A  +   + +   VP V T+  L+ G    G +  A 
Sbjct: 258 LRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDAL 317

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
            +   M+ +G  P  I+Y +++ G C +G+L  A   F+ M +    PD   Y+T I G 
Sbjct: 318 GMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGF 377

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
            K GD   A  +  +M   G  P+++ Y  +V  LCK    ++A  L+ KM  +   P+ 
Sbjct: 378 SKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNT 437

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
           +T+ ++I +  ++G   R  ++F+ M R G  P   TY  L+H     G  E A    +E
Sbjct: 438 LTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTE 497

Query: 619 MQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGN 678
           M   G   ++++YN  I+GLC++R I +A  L   M  +GI P+ +T+  +I+  C  GN
Sbjct: 498 MLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGN 557

Query: 679 WQEALRLYKEM 689
            + A  +   M
Sbjct: 558 VRAAAWMLGRM 568



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 173/379 (45%), Gaps = 13/379 (3%)

Query: 337 EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN-----VIPDIISYNTLLY 391
           +EM  RGVA        L+  +C + R   A        R         P +  YN LL 
Sbjct: 79  QEMRLRGVA---CPEGALVAAICAFARAGAADRALKTFYRARHDLGCAAPTVRVYNHLLD 135

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
              R   +     ++D +R   + P V TYN LI  LC+   +  A+++ + M  +G  P
Sbjct: 136 ALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRP 195

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           D +++T +++  CK+  L  AR    EM   G   +  A    + G+ ++    E + + 
Sbjct: 196 DEVSHTTIISALCKLDRLDEARGILAEMTPVGASYN--AVVHALCGQFRM---REVFLVV 250

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
           +EM+ +G  PD + Y  +V   CK   L  A  +L +MV +G +P+  T+T ++    + 
Sbjct: 251 DEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDD 310

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
           G +     ++N M+ +G +P+ ++Y VLI      G L+ A   FS M      P+V TY
Sbjct: 311 GKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTY 370

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           + LI+G  +   +D A  ++ DM   G  PN   YT +++  C    + +A  L  +M  
Sbjct: 371 STLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSL 430

Query: 692 REIEPDYCTHSALLLKQLD 710
               P+  T + L+    D
Sbjct: 431 ENCPPNTLTFNTLIRSLCD 449



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 182/416 (43%), Gaps = 51/416 (12%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCV-SIKILD 177
           G++ D   + +I+    ++  LR A  ++  +V                  CV +++   
Sbjct: 257 GLRPDTVAYTSIVGAFCKARELRMACAILARMV---------------TEGCVPNVQTFT 301

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +L+  +     V   L ++N M+  G  P   + N +I+ L   G   +A  V+  MG+ 
Sbjct: 302 VLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKS 361

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
              P + TY+T++D F K G++  A+ +  +M   GC PN V Y  ++            
Sbjct: 362 DCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVD----------- 410

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
                                ++C   +K +  +A NL ++M      P   T+N LI  
Sbjct: 411 ---------------------VLC---KKVMFDQAENLIDKMSLENCPPNTLTFNTLIRS 446

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           LC  GR   A + F  M R    P+  +YN LL+G  R GN  +A  +  E+ +     +
Sbjct: 447 LCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELS 506

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           +V+YNT I GLC+   ++ A  L   MI QGI PD  T+  +++  CK GN+  A     
Sbjct: 507 LVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLG 566

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
            M       +  AYT+ ++G        +A     +ML +G  P+  T+NVLV G+
Sbjct: 567 RMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLVRGI 622


>gi|297846140|ref|XP_002890951.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297336793|gb|EFH67210.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 689

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 157/562 (27%), Positives = 266/562 (47%), Gaps = 42/562 (7%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           +LD L     +K  V + L     ++  G   D+ +CN+I+K L  +   V +R +  ++
Sbjct: 115 VLDALF----RKGEVTKALDFHRLVMERGFRVDIVSCNKILKGLSVDQIEVASRMLSLVL 170

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
            + G  P++VT+ T+++ FCK GEM  A EL   M+ RG +P+ + Y+ LI G+ + G L
Sbjct: 171 -DCGPAPNVVTFCTLINGFCKRGEMDRAFELFKVMEQRGIAPDLIAYSTLIDGYFKAGML 229

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
                L    L  G+K+    ++  I  Y + G L  A ++ + M+ +G++P + TY IL
Sbjct: 230 GMGHKLFSQALHKGVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRMLCQGISPNVVTYTIL 289

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           I GLC+ GR+ +A   + ++L++ + P +++Y++L+ G+C+ GN+   F L++++     
Sbjct: 290 IKGLCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLRSGFALYEDMIKMGY 349

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P VV Y  L+DGLC+ G +  A +     + Q I P+V+ +  +++G C++     A +
Sbjct: 350 PPDVVIYGVLVDGLCKQGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWCRLNRCDEALK 409

Query: 475 FFNEMLRKGLQPDRFAYTT-----QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
            F  M   G++PD    TT      + G LK     E   L   M   G  PD + +  L
Sbjct: 410 VFRLMGIYGIKPDVATITTLMRVTVMEGRLK-----EGLFLFFRMFKMGLEPDAVAFCTL 464

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           +   CK        +L   M  +    D      +I+   +   +      FNN+L   +
Sbjct: 465 MDAFCKNMKPTIGLQLFDLMQRNKIPADIAVCNVVINLLFKGQSVEEASKFFNNLLEGKM 524

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALI-------------- 635
            P +VTY  +I  + +  RL+ A   F  ++     PN +T   LI              
Sbjct: 525 EPDIVTYNTMICGYCSLRRLDEAARIFEMLKFTPFGPNAVTLTILIHTLCKNSDMDGALR 584

Query: 636 -------------NGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
                        +GLC+  R+D+A  +F    +  ILP+   Y ILI   C  G   EA
Sbjct: 585 IISPSIISYSIIIDGLCKRGRVDEATNIFHQAIDAKILPDVVAYAILIRGCCKVGRLVEA 644

Query: 683 LRLYKEMLDREIEPDYCTHSAL 704
             LY+ ML   ++PD     AL
Sbjct: 645 ALLYEHMLRNGVKPDDLLQRAL 666



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 146/490 (29%), Positives = 252/490 (51%), Gaps = 2/490 (0%)

Query: 196 FNKMLRNGLLP-DVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           F+K+ R G +P  V     ++  L   G   KA + +R++ E G +  IV+ N +L    
Sbjct: 96  FDKLCRGGTVPFGVSAHGFVLDALFRKGEVTKALDFHRLVMERGFRVDIVSCNKILKGLS 155

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
            + +++ A  +L  +   G +PN VT+  LI GF + GE+++A  L + M + G+     
Sbjct: 156 VD-QIEVASRMLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFELFKVMEQRGIAPDLI 214

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +Y+ +I GY + G+L     L  + + +GV   +  ++  I    K+G ++ A   +  M
Sbjct: 215 AYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRM 274

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           L + + P++++Y  L+ G C+ G I EAF ++ ++  R L P+VVTY++LIDG C+YG+L
Sbjct: 275 LCQGISPNVVTYTILIKGLCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNL 334

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
                L E+MI  G  PDV+ Y ++V+G CK G +  A  F  + L + ++P+   + + 
Sbjct: 335 RSGFALYEDMIKMGYPPDVVIYGVLVDGLCKQGLMLHALRFSVKTLGQSIRPNVVVFNSL 394

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I G  +L    EA ++   M   G  PD+ T   L+      G L+E   L  +M   G 
Sbjct: 395 IDGWCRLNRCDEALKVFRLMGIYGIKPDVATITTLMRVTVMEGRLKEGLFLFFRMFKMGL 454

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            PD + + +++ A  +      G  LF+ M R  +   +    V+I+       +E A  
Sbjct: 455 EPDAVAFCTLMDAFCKNMKPTIGLQLFDLMQRNKIPADIAVCNVVINLLFKGQSVEEASK 514

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
           +F+ +    + P+++TYN +I G C LRR+D+A  +F  ++     PN  T TILI+  C
Sbjct: 515 FFNNLLEGKMEPDIVTYNTMICGYCSLRRLDEAARIFEMLKFTPFGPNAVTLTILIHTLC 574

Query: 675 NAGNWQEALR 684
              +   ALR
Sbjct: 575 KNSDMDGALR 584



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 134/479 (27%), Positives = 243/479 (50%), Gaps = 20/479 (4%)

Query: 247 NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVT-YNVLITGFSRNGELEQARGLIRDML 305
           N+ LD+F  +G+  ++ + L      G  P GV+ +  ++    R GE+ +A    R ++
Sbjct: 82  NSALDTF--DGQRSDSFDKLCR---GGTVPFGVSAHGFVLDALFRKGEVTKALDFHRLVM 136

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR----GVAPTLATYNILIYGLCKW 361
           + G +V   S N I+     KGL V+ + +   M++     G AP + T+  LI G CK 
Sbjct: 137 ERGFRVDIVSCNKIL-----KGLSVDQIEVASRMLSLVLDCGPAPNVVTFCTLINGFCKR 191

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           G +  A   F  M ++ + PD+I+Y+TL+ GY ++G +G    LF +   + +   VV +
Sbjct: 192 GEMDRAFELFKVMEQRGIAPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVF 251

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           ++ ID   ++G L  A  + + M+ QGI P+V+TYTI++ G C+ G +  A   + ++L+
Sbjct: 252 SSTIDVYVKFGYLTTAFDVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGIYCQILK 311

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
           +GL+P    Y++ I G  K G+    + L E+M+  G+PPD++ Y VLV GLCK G +  
Sbjct: 312 RGLEPSVVTYSSLIDGFCKYGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLCKQGLMLH 371

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A     K +G    P+ + + S+I     +        +F  M   G+ P + T T L+ 
Sbjct: 372 ALRFSVKTLGQSIRPNVVVFNSLIDGWCRLNRCDEALKVFRLMGIYGIKPDVATITTLMR 431

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
                GRL+     F  M   G+ P+ + +  L++  C+  +      LF  M+   I  
Sbjct: 432 VTVMEGRLKEGLFLFFRMFKMGLEPDAVAFCTLMDAFCKNMKPTIGLQLFDLMQRNKIPA 491

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL-----LKQLDKDYKV 715
           +     ++IN      + +EA + +  +L+ ++EPD  T++ ++     L++LD+  ++
Sbjct: 492 DIAVCNVVINLLFKGQSVEEASKFFNNLLEGKMEPDIVTYNTMICGYCSLRRLDEAARI 550



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 142/280 (50%), Gaps = 2/280 (0%)

Query: 442 ENMINQGILP-DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
           + +   G +P  V  +  +++   + G ++ A +F   ++ +G + D  +    + G L 
Sbjct: 97  DKLCRGGTVPFGVSAHGFVLDALFRKGEVTKALDFHRLVMERGFRVDIVSCNKILKG-LS 155

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
           +     A R+   +L  G  P+++T+  L++G CK G ++ A EL + M   G  PD I 
Sbjct: 156 VDQIEVASRMLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFELFKVMEQRGIAPDLIA 215

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           Y+++I    + G L  G  LF+  L KG+   +V ++  I  +   G L  AF  +  M 
Sbjct: 216 YSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRML 275

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
            +GI PNV+TY  LI GLC+  RI +A+G++  + + G+ P+  TY+ LI+  C  GN +
Sbjct: 276 CQGISPNVVTYTILIKGLCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLR 335

Query: 681 EALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
               LY++M+     PD   +  L+     +   +HA+ +
Sbjct: 336 SGFALYEDMIKMGYPPDVVIYGVLVDGLCKQGLMLHALRF 375



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 107/431 (24%), Positives = 181/431 (41%), Gaps = 76/431 (17%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           GVK D  VF + +++ ++ G L +A+ V + ++C             G+S   ++    +
Sbjct: 243 GVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRMLC------------QGISP--NVVTYTI 288

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+    +   + +   ++ ++L+ GL P V   + +I      G       +Y  M + G
Sbjct: 289 LIKGLCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLRSGFALYEDMIKMG 348

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR-------- 290
             P +V Y  ++D  CK+G M  AL    +  G+   PN V +N LI G+ R        
Sbjct: 349 YPPDVVIYGVLVDGLCKQGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWCRLNRCDEAL 408

Query: 291 ---------------------------NGELEQARGLIRDMLKLGLKVSAHSYNPIICGY 323
                                       G L++   L   M K+GL+  A ++  ++  +
Sbjct: 409 KVFRLMGIYGIKPDVATITTLMRVTVMEGRLKEGLFLFFRMFKMGLEPDAVAFCTLMDAF 468

Query: 324 SEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
            +       L L + M    +   +A  N++I  L K   V +A   F  +L   + PDI
Sbjct: 469 CKNMKPTIGLQLFDLMQRNKIPADIAVCNVVINLLFKGQSVEEASKFFNNLLEGKMEPDI 528

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI------------------ 425
           ++YNT++ GYC    + EA  +F+ L+     P  VT   LI                  
Sbjct: 529 VTYNTMICGYCSLRRLDEAARIFEMLKFTPFGPNAVTLTILIHTLCKNSDMDGALRIISP 588

Query: 426 ---------DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
                    DGLC+ G ++ A  +    I+  ILPDV+ Y I++ G CK+G L  A   +
Sbjct: 589 SIISYSIIIDGLCKRGRVDEATNIFHQAIDAKILPDVVAYAILIRGCCKVGRLVEAALLY 648

Query: 477 NEMLRKGLQPD 487
             MLR G++PD
Sbjct: 649 EHMLRNGVKPD 659


>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 140/445 (31%), Positives = 233/445 (52%), Gaps = 15/445 (3%)

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           + +  G  CS     ++ L+  +  +G +  A    R +     ++  H      CGY  
Sbjct: 143 ILDTAGTRCS--NFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHG-----CGYLL 195

Query: 326 KGLL-----VEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
             ++     V       E++  G  P +  YNILI   CK G + DA+  F E+ ++ + 
Sbjct: 196 DKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLR 255

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           P  +S+NTL+ G C+S N+ E F L   +    + P V TY+ LI GLC+ G L+VA+QL
Sbjct: 256 PTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQL 315

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
            + M  +G+ P+ IT+T +++G  +   +  A   +++ML  G++PD   Y T + G  K
Sbjct: 316 FDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCK 375

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
           +GD ++A +L +EM   G  PD ITY  L+ G CK G LE A E+ + M  +G + D++ 
Sbjct: 376 VGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVA 435

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           +T++I      G +R        M+  G+ P   TYT++I  +  +G +++ F    EMQ
Sbjct: 436 FTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQ 495

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
           + G +P VITYN L+NGLC+  ++  A  L   M   G+ P+  TY IL+  +C  G  +
Sbjct: 496 INGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAE 555

Query: 681 EALRLYKEMLDREIEPDYCTHSALL 705
           + L+L  E   + +  DY  +++L+
Sbjct: 556 DLLKLRNE---KGLIVDYAYYTSLV 577



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 160/585 (27%), Positives = 276/585 (47%), Gaps = 45/585 (7%)

Query: 52  PESESYYKELIISTVEEKPWAFCNNRWVSDHFQAVVSDPEL--LVRVLNRIREKP----- 104
           P + S+   + +S    KP +F  + W S    AV++DP L  +   +N  + KP     
Sbjct: 2   PNNSSFKHSISLS----KP-SFLYSTWHSPPPPAVLADPVLAAVSTAINNAQTKPLASSL 56

Query: 105 RIALRFFR-------------------------WVETQPGVKRDEFVFCTILEILIESGL 139
           R  L  F+                         W+ + P  +     +C +   L    +
Sbjct: 57  RRLLPSFKPHHFIDLINQNPFSLSPSSLFSFFNWLSSIPTFRHTSQSYCAMANFLSAHQM 116

Query: 140 LRSAYWVVETVVCV----NMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLV 195
            +    ++  +V      +   +   ++    + C +  + D L++ Y     V   +  
Sbjct: 117 FQECQSIIRFLVSRKGKDSAASVFAAILDTAGTRCSNF-VFDALMIAYWDSGFVSDAIQC 175

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
           F  +  +        C  ++  + ++   V     Y  + E+G  P +  YN +++ FCK
Sbjct: 176 FRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCK 235

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
           EG +++A  +  E++ RG  P  V++N LI G  ++  L++   L + M +  +     +
Sbjct: 236 EGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFT 295

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           Y+ +I G  ++G L  A  L +EM  RG+ P   T+  LI G  +  R+  A + + +ML
Sbjct: 296 YSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQML 355

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
              V PD++ YNTLL G C+ G++ +A  L DE++   + P  +TY TLIDG C+ GDLE
Sbjct: 356 TMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLE 415

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            A ++++ M  +G++ D + +T +++G C+ G +  A     EM+  G++PD   YT  I
Sbjct: 416 SAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVI 475

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
            G  K G+    ++L +EM   G  P +ITYNVL++GLCK G ++ AN LL  M+  G  
Sbjct: 476 DGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVT 535

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           PD ITY  ++    + G   +  DL      KGL      YT L+
Sbjct: 536 PDDITYNILLEGHCKNG---KAEDLLKLRNEKGLIVDYAYYTSLV 577


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 145/518 (27%), Positives = 259/518 (50%), Gaps = 2/518 (0%)

Query: 205 LPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALE 264
           LP + +CN +++ L   G     R  + ++   G +P    +N  + +    G++ EA+ 
Sbjct: 126 LPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVG 185

Query: 265 LLWEMQGRGC-SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGY 323
           +L  M   G   PN  +YNV+I G  R G    A  +  +M +  +  +  +YN +I G+
Sbjct: 186 MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGH 245

Query: 324 SEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
            + G L     L ++MV  G+ P   TYN+L+ GLC+ GR+ +      EM  + ++PD 
Sbjct: 246 IKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDG 305

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
            +Y+ L  G  R+G+      LF +     +     T + L++GLC+ G + +A+++ ++
Sbjct: 306 FTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQS 365

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           ++N G++P  + Y  ++NG C+ G L  A   F +M  + ++PD   Y   I G  K   
Sbjct: 366 LVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAER 425

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
            + A  L  EM   G  P + T+N L+    + G LE+   +L +M  +G  P+ ++Y S
Sbjct: 426 ITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGS 485

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           I++A  + G +     + ++M  K + P    Y  +I A+   G  + AF+   +M+  G
Sbjct: 486 IVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNG 545

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
           I P+++TYN LI GLC   +I +A  +   +    ++P+  +Y  LI+  C  GN  +AL
Sbjct: 546 ISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKAL 605

Query: 684 RLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYL 721
            L + M    I+    T+   L+  L    +++ +EYL
Sbjct: 606 DLQQRMHKYGIKSTVRTYHQ-LISGLGGAGRLNEMEYL 642



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 148/504 (29%), Positives = 249/504 (49%), Gaps = 1/504 (0%)

Query: 195 VFNKMLRNGLLP-DVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
           +  +M R+G  P +  + N +I  +   G    A EV+  M E  + P+ +TYNTM+D  
Sbjct: 186 MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGH 245

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
            K G+++    L  +M   G  PN +TYNVL++G  R G + +   L+ +M    +    
Sbjct: 246 IKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDG 305

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
            +Y+ +  G S  G     L+L  + +  GV     T +IL+ GLCK G+VS A      
Sbjct: 306 FTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQS 365

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           ++   ++P  + YNTL+ GYC++G +  AF  F +++SR++ P  +TYN LI+GLC+   
Sbjct: 366 LVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAER 425

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           +  AQ L   M + G+ P V T+  +++   + G L       +EM   GL+P+  +Y +
Sbjct: 426 ITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGS 485

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            +    K G   EA  + ++M  K   P+   YN ++    + G  ++A  L+ KM  +G
Sbjct: 486 IVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNG 545

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
             P  +TY  +I        +    ++ N++    L P  V+Y  LI A   RG ++ A 
Sbjct: 546 ISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKAL 605

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
                M   GI+  V TY+ LI+GL    R+++   L+  M +  ++P+   + I++   
Sbjct: 606 DLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAY 665

Query: 674 CNAGNWQEALRLYKEMLDREIEPD 697
              GN  +A  L KEML +    D
Sbjct: 666 SKYGNEIKAEDLRKEMLQKRNNHD 689



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 129/437 (29%), Positives = 223/437 (51%), Gaps = 4/437 (0%)

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           R+ ++ +A G+   +   G +    ++N  +      G L EA+ +   M   G  P  A
Sbjct: 144 RHADVRRAFGI---LASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNA 200

Query: 350 -TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDE 408
            +YN++I G+ + GR  DA   F EM  + V+P+ I+YNT++ G+ + G++   F L D+
Sbjct: 201 FSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQ 260

Query: 409 LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
           +    L P  +TYN L+ GLCR G +     L + M +Q ++PD  TY+I+ +G  + G+
Sbjct: 261 MVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGD 320

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
                  F + L+ G+    +  +  + G  K G  S A  + + ++  G  P  + YN 
Sbjct: 321 SKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNT 380

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           L++G C+ G LE A     +M      PDHITY ++I+   +   +   +DL   M   G
Sbjct: 381 LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNG 440

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
           ++PT+ T+  LI A+   G+LE  F+  SEMQ  G++PNV++Y +++N  C+  +I +A 
Sbjct: 441 VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAV 500

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQ 708
            +  DM  + +LPN   Y  +I+     G   +A  L ++M    I P   T++ L+   
Sbjct: 501 AILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGL 560

Query: 709 LDKDYKVHAVEYLESLT 725
            ++     A E + SL+
Sbjct: 561 CNQSQISEAEEIINSLS 577



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/459 (25%), Positives = 227/459 (49%), Gaps = 27/459 (5%)

Query: 116 TQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGI------LDVLIGG---- 165
           T+  V  +   + T+++  I+ G L + + + + +VC   HG+       +VL+ G    
Sbjct: 227 TERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVC---HGLKPNAITYNVLLSGLCRA 283

Query: 166 ---GLSSCV-----SIKIL------DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNC 211
              G +S +     S K++       +L    ++    +  L +F K L+NG+      C
Sbjct: 284 GRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTC 343

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
           + ++  L  +G    A EV + +   G+ P+ V YNT+++ +C+ GE++ A     +M+ 
Sbjct: 344 SILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKS 403

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
           R   P+ +TYN LI G  +   +  A+ L+ +M   G+  +  ++N +I  Y   G L +
Sbjct: 404 RHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEK 463

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
              +  EM   G+ P + +Y  ++   CK G++ +A     +M  K+V+P+   YN ++ 
Sbjct: 464 CFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIID 523

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
            Y   G   +AF+L ++++S  + P++VTYN LI GLC    +  A+++  ++ N  ++P
Sbjct: 524 AYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIP 583

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           D ++Y  +++  C  GN+  A +    M + G++     Y   I+G    G  +E   L 
Sbjct: 584 DAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLY 643

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           ++M+     P    +N++V    K G+  +A +L ++M+
Sbjct: 644 QKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEML 682


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 141/502 (28%), Positives = 252/502 (50%), Gaps = 1/502 (0%)

Query: 205 LPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALE 264
           LP + +CN +++ L   G     R  + ++   G +P    +N  + +    G++ EA+ 
Sbjct: 122 LPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVG 181

Query: 265 LLWEMQGRGC-SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGY 323
           +L  M   G   PN  +YNV+I G  R G    A  +  +M +  +  +  +YN +I G+
Sbjct: 182 MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGH 241

Query: 324 SEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
            + G L    +L ++MV  G+ P   TYN+L+ GLC+ GR+ +      EM  + ++PD 
Sbjct: 242 IKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDG 301

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
            +Y+ L  G  R+G+      LF +     +     T + L++GLC+ G + +A+++ ++
Sbjct: 302 FTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQS 361

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           ++N G++P  + Y  ++NG C+ G L  A   F +M  + ++PD   Y   I G  K   
Sbjct: 362 LVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAER 421

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
            + A  L  EM   G  P + T+N L+    + G LE+   +L +M  +G  P+ ++Y S
Sbjct: 422 ITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGS 481

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           I++A  + G +     + ++M  K + P    Y  +I A+   G  + AF+   +M+  G
Sbjct: 482 IVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNG 541

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
           I P+++TYN LI GLC   +I +A  +   +    ++P+  +Y  LI+  C  GN  +AL
Sbjct: 542 ISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKAL 601

Query: 684 RLYKEMLDREIEPDYCTHSALL 705
            L + M    I+    T+  L+
Sbjct: 602 DLQQRMHKYGIKSTVRTYHQLI 623



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 148/504 (29%), Positives = 248/504 (49%), Gaps = 1/504 (0%)

Query: 195 VFNKMLRNGLLP-DVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
           +  +M R+G  P +  + N +I  +   G    A EV+  M E  + P+ +TYNTM+D  
Sbjct: 182 MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGH 241

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
            K G+++    L  +M   G  PN +TYNVL++G  R G + +   L+ +M    +    
Sbjct: 242 IKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDG 301

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
            +Y+ +  G S  G     L+L  + +  GV     T +IL+ GLCK G+VS A      
Sbjct: 302 FTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQS 361

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           ++   ++P  + YNTL+ GYC++G +  AF  F +++SR++ P  +TYN LI+GLC+   
Sbjct: 362 LVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAER 421

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           +  AQ L   M + G+ P V T+  +++   + G L       +EM   GL+P+  +Y +
Sbjct: 422 ITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGS 481

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            +    K G   EA  + ++M  K   P+   YN ++    + G  ++A  L+ KM  +G
Sbjct: 482 IVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNG 541

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
             P  +TY  +I        +    ++ N++    L P  V+Y  LI A   RG ++ A 
Sbjct: 542 ISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKAL 601

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
                M   GI+  V TY+ LI+GL    R+ +   L+  M +  ++P+   + I++   
Sbjct: 602 DLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAY 661

Query: 674 CNAGNWQEALRLYKEMLDREIEPD 697
              GN  +A  L KEML +    D
Sbjct: 662 SKYGNEIKAEDLRKEMLQKRNNHD 685



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 129/437 (29%), Positives = 223/437 (51%), Gaps = 4/437 (0%)

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           R+ ++ +A G+   +   G +    ++N  +      G L EA+ +   M   G  P  A
Sbjct: 140 RHADVRRAFGI---LASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNA 196

Query: 350 -TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDE 408
            +YN++I G+ + GR  DA   F EM  + V+P+ I+YNT++ G+ + G++   F L D+
Sbjct: 197 FSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQ 256

Query: 409 LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
           +    L P  +TYN L+ GLCR G +     L + M +Q ++PD  TY+I+ +G  + G+
Sbjct: 257 MVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGD 316

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
                  F + L+ G+    +  +  + G  K G  S A  + + ++  G  P  + YN 
Sbjct: 317 SKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNT 376

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           L++G C+ G LE A     +M      PDHITY ++I+   +   +   +DL   M   G
Sbjct: 377 LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNG 436

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
           ++PT+ T+  LI A+   G+LE  F+  SEMQ  G++PNV++Y +++N  C+  +I +A 
Sbjct: 437 VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAV 496

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQ 708
            +  DM  + +LPN   Y  +I+     G   +A  L ++M    I P   T++ L+   
Sbjct: 497 AILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGL 556

Query: 709 LDKDYKVHAVEYLESLT 725
            ++     A E + SL+
Sbjct: 557 CNQSQISEAEEIINSLS 573



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 115/459 (25%), Positives = 226/459 (49%), Gaps = 27/459 (5%)

Query: 116 TQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGI------LDVLIGG---- 165
           T+  V  +   + T+++  I+ G L + + + + +VC   HG+       +VL+ G    
Sbjct: 223 TERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVC---HGLKPNAITYNVLLSGLCRA 279

Query: 166 ---GLSSCV-----SIKIL------DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNC 211
              G +S +     S K++       +L    ++    +  L +F K L+NG+      C
Sbjct: 280 GRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTC 339

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
           + ++  L  +G    A EV + +   G+ P+ V YNT+++ +C+ GE++ A     +M+ 
Sbjct: 340 SILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKS 399

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
           R   P+ +TYN LI G  +   +  A+ L+ +M   G+  +  ++N +I  Y   G L +
Sbjct: 400 RHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEK 459

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
              +  EM   G+ P + +Y  ++   CK G++ +A     +M  K+V+P+   YN ++ 
Sbjct: 460 CFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIID 519

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
            Y   G   +AF+L ++++S  + P++VTYN LI GLC    +  A+++  ++ N  ++P
Sbjct: 520 AYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIP 579

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           D ++Y  +++  C  GN+  A +    M + G++     Y   I+G    G   E   L 
Sbjct: 580 DAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLY 639

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           ++M+     P    +N++V    K G+  +A +L ++M+
Sbjct: 640 QKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEML 678


>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 582

 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 150/498 (30%), Positives = 252/498 (50%), Gaps = 1/498 (0%)

Query: 196 FNKMLRN-GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           FN +L +    P +   N+I+  L        A  +++ M   GI     T+N +++ F 
Sbjct: 57  FNSLLHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFS 116

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           + G    +  +  ++  +G  PN +T+N LI G    G + QA      ++  G  +   
Sbjct: 117 QLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQV 176

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           SY  +I G  + G +  AL L + +  + V P    YN++I  +CK   V+DA   + +M
Sbjct: 177 SYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQM 236

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           + K + PD  + N+L+YG+C  G + EA  L  ++   N+ P + T++ L+D  C+ G +
Sbjct: 237 VAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKV 296

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A+ +    + + I+ DV+TY  +++G C +  ++ A++ F+ M  +G+  +  +YTT 
Sbjct: 297 KEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTM 356

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I G  K+    EA  L EEM  +   P+++TYN L+ GL KLG +    +L+ +M   G 
Sbjct: 357 INGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQ 416

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            P+ ITY SI+ A  +   + +   L  N+  +G+ P + TYTVLI      G+LE A  
Sbjct: 417 PPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQK 476

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F ++ VKG   +V TY  +I G C     D A  L   ME+ G +PN  TY I+I    
Sbjct: 477 VFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILSLF 536

Query: 675 NAGNWQEALRLYKEMLDR 692
                  A +L +EM+ R
Sbjct: 537 EKDENDMAEKLLREMIAR 554



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 141/475 (29%), Positives = 249/475 (52%), Gaps = 1/475 (0%)

Query: 193 LLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDS 252
           L +  +M  NG++ D    N +I      G +  +  V+  + + G  P+ +T+NT++  
Sbjct: 90  LSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKG 149

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
            C +G + +AL    ++  +G   + V+Y  LI G  + G +  A  L++ +    ++ +
Sbjct: 150 LCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPN 209

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
           A  YN II    +  L+ +A +L  +MV + ++P   T N LIYG C  G++ +A     
Sbjct: 210 AVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLH 269

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
           +M+ +N+ P + +++ L+  +C+ G + EA ++      ++++  VVTYN+L+DG C   
Sbjct: 270 KMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVK 329

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
           ++  A+ + ++M ++G++ +V +YT M+NG CK+  +  A   F EM  + + P+   Y 
Sbjct: 330 EINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYN 389

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
           + I G  KLG  S   +L +EM  +G PP++ITYN ++  LCK   +++A  LL  +   
Sbjct: 390 SLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQ 449

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
           G  PD  TYT +I    + G L   + +F ++L KG +  + TYTV+I     +G  + A
Sbjct: 450 GIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAA 509

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK-YTY 666
               S+M+  G  PN  TY  +I  L      D A  L  +M   G+L  K Y Y
Sbjct: 510 LALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIARGLLDEKSYIY 564



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 112/425 (26%), Positives = 216/425 (50%), Gaps = 35/425 (8%)

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           +N I+    +      AL+L ++M   G+     T+NILI    + G  S +   F ++L
Sbjct: 73  FNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKIL 132

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
           +K   P+ I++NTL+ G C  G+I +A    D++ ++      V+Y TLI+GLC+ G + 
Sbjct: 133 KKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRIT 192

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            A QL + +  + + P+ + Y ++++  CK   ++ A + +++M+ K + PD F   + I
Sbjct: 193 AALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLI 252

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
            G   +G   EA  L  +M+ +   P + T+++LV   CK G ++EA  +L   +    I
Sbjct: 253 YGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDII 312

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG--------------------------- 588
            D +TY S++     + ++ + +D+F++M  +G                           
Sbjct: 313 LDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNL 372

Query: 589 --------LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
                   + P +VTY  LI      G++        EM  +G  PN+ITYN++++ LC+
Sbjct: 373 FEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCK 432

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
              +D+A  L  +++++GI P+ YTYT+LI   C +G  ++A ++++++L +    D  T
Sbjct: 433 NHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYT 492

Query: 701 HSALL 705
           ++ ++
Sbjct: 493 YTVMI 497



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 175/330 (53%)

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
            KN  P II +N +L    ++ +   A  L  ++    +V    T+N LI+   + G   
Sbjct: 63  HKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNS 122

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
           ++  +   ++ +G  P+ IT+  ++ G C  G++  A  F ++++ +G   D+ +Y T I
Sbjct: 123 LSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLI 182

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
            G  K+G  + A +L + +  K   P+ + YN+++  +CK   + +A +L  +MV     
Sbjct: 183 NGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRIS 242

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           PD  T  S+I+    MG L+    L + M+ + ++P + T+++L+ A    G+++ A M 
Sbjct: 243 PDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMM 302

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
                 K I  +V+TYN+L++G C ++ I++A  +F  M   G++ N  +YT +IN  C 
Sbjct: 303 LGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCK 362

Query: 676 AGNWQEALRLYKEMLDREIEPDYCTHSALL 705
                EA+ L++EM  R+I P+  T+++L+
Sbjct: 363 IKMVDEAVNLFEEMRCRKIIPNVVTYNSLI 392



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 103/198 (52%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K  MV++ + +F +M    ++P+V   N +I  L   G      ++   M + G  P+I+
Sbjct: 362 KIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNII 421

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TYN++LD+ CK   + +A+ LL  ++ +G  P+  TY VLI G  ++G+LE A+ +  D+
Sbjct: 422 TYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDL 481

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           L  G  +  ++Y  +I G+  KGL   AL L  +M   G  P   TY I+I  L +    
Sbjct: 482 LVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILSLFEKDEN 541

Query: 365 SDARHRFFEMLRKNVIPD 382
             A     EM+ + ++ +
Sbjct: 542 DMAEKLLREMIARGLLDE 559



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 121/255 (47%), Gaps = 2/255 (0%)

Query: 476 FNEMLR-KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
           FN +L  K   P    +   ++  +K    S A  L ++M   G   D  T+N+L++   
Sbjct: 57  FNSLLHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFS 116

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           +LG    +  +  K++  GF P+ IT+ ++I      G + +  +  + ++ +G     V
Sbjct: 117 QLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQV 176

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           +Y  LI+     GR+  A      +  K ++PN + YN +I+ +C+ + ++ A+ L+  M
Sbjct: 177 SYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQM 236

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYK 714
             + I P+ +T   LI   C  G  +EA+ L  +M+   I P   T S +L+    K+ K
Sbjct: 237 VAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFS-ILVDAFCKEGK 295

Query: 715 VHAVEYLESLTLGAE 729
           V   + +  +T+  +
Sbjct: 296 VKEAKMMLGVTMKKD 310


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 143/466 (30%), Positives = 233/466 (50%), Gaps = 9/466 (1%)

Query: 229 EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
           E  R++G    +P   T   ++      G   EA  +L       C P+ + YN ++ G+
Sbjct: 83  EALRLVGS-ARRPDAGTCAALIKKLSASGRTAEARRVLA-----ACGPDVMAYNAMVAGY 136

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
              G+L+ AR L+ +M    ++  A++YN +I G   +G    AL + +EM+ R   P +
Sbjct: 137 CGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDV 193

Query: 349 ATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDE 408
            TY IL+   CK      A     EM  K   PDI++YN ++ G C+ G + +A      
Sbjct: 194 VTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKN 253

Query: 409 LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
           L S    P  V+YN ++ GLC     E A++L   M  +G  P+V+T+ ++++  C+ G 
Sbjct: 254 LPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGL 313

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
           +  A E   ++ + G  P+  +Y   +    K     +A    + M+++G  PD+++YN 
Sbjct: 314 VEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNT 373

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           L+  LC+ G ++ A ELL ++   G  P  I+Y ++I    + G  +   +L N M+ KG
Sbjct: 374 LLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKG 433

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
           L P ++TY+ +        R+E A   F ++Q  GIRPN + YNA+I GLC+ R    A 
Sbjct: 434 LQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAI 493

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
            LF  M   G +PN+ TYTILI      G  +EA  L  E+  R +
Sbjct: 494 DLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGV 539



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 123/384 (32%), Positives = 205/384 (53%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           PD    N +I+ L   G +  A  V   M      P +VTY  +L++ CK    ++A++L
Sbjct: 156 PDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKL 215

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           L EM+ +GC+P+ VTYNV++ G  + G ++ A   ++++   G + +  SYN ++ G   
Sbjct: 216 LDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCT 275

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
                +A  L  EM  +G  P + T+N+LI  LC+ G V  A     ++ +    P+ +S
Sbjct: 276 AERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLS 335

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           YN LL+ +C+   + +A    D + SR   P +V+YNTL+  LCR G+++VA +L   + 
Sbjct: 336 YNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK 395

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
           ++G  P +I+Y  +++G  K G    A E  NEM+ KGLQPD   Y+T  AG  +     
Sbjct: 396 DKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIE 455

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           +A R   ++   G  P+ + YN ++ GLCK      A +L   M+G+G +P+  TYT +I
Sbjct: 456 DAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 515

Query: 566 HASLEMGDLRRGRDLFNNMLRKGL 589
                 G ++  RDL + +  +G+
Sbjct: 516 EGLAYEGLIKEARDLLDELCSRGV 539



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 137/455 (30%), Positives = 214/455 (47%), Gaps = 8/455 (1%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           PD   C  +IK L  +G + +AR V    G     P ++ YN M+  +C  G++  A  L
Sbjct: 94  PDAGTCAALIKKLSASGRTAEARRVLAACG-----PDVMAYNAMVAGYCGAGQLDAARRL 148

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           + EM      P+  TYN LI G    G    A  ++ +ML+        +Y  ++    +
Sbjct: 149 VAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCK 205

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
           +    +A+ L +EM  +G  P + TYN+++ G+C+ GRV DA      +      P+ +S
Sbjct: 206 RSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVS 265

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           YN +L G C +    +A  L  E+  +   P VVT+N LI  LCR G +E A ++ E + 
Sbjct: 266 YNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIP 325

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
             G  P+ ++Y  +++  CK   +  A  F + M+ +G  PD  +Y T +    + G+  
Sbjct: 326 KYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVD 385

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
            A  L  ++  KG  P LI+YN ++ GL K G  +EA ELL +MV  G  PD ITY++I 
Sbjct: 386 VAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIA 445

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
                   +      F  +   G+ P  V Y  +I     R     A   F+ M   G  
Sbjct: 446 AGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCM 505

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
           PN  TY  LI GL     I +A  L  ++   G++
Sbjct: 506 PNESTYTILIEGLAYEGLIKEARDLLDELCSRGVV 540



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 122/417 (29%), Positives = 209/417 (50%), Gaps = 12/417 (2%)

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           R GEL++A         L L  SA   +   C    K L       E   V     P + 
Sbjct: 77  RRGELDEA---------LRLVGSARRPDAGTCAALIKKLSASGRTAEARRVLAACGPDVM 127

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
            YN ++ G C  G++  AR    EM    V PD  +YNTL+ G C  G    A  + DE+
Sbjct: 128 AYNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDEM 184

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
             R  VP VVTY  L++  C+    + A +L + M ++G  PD++TY ++VNG C+ G +
Sbjct: 185 LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 244

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A EF   +   G +P+  +Y   + G        +A  L  EM  KG PP+++T+N+L
Sbjct: 245 DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNML 304

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           +  LC+ G +E A E+L ++   G  P+ ++Y  ++HA  +   + +     + M+ +G 
Sbjct: 305 ISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGC 364

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
            P +V+Y  L+ A    G +++A     +++ KG  P +I+YN +I+GL +  +  +A  
Sbjct: 365 YPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALE 424

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
           L  +M  +G+ P+  TY+ +    C     ++A+R + ++ D  I P+   ++A++L
Sbjct: 425 LLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIIL 481



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 114/363 (31%), Positives = 191/363 (52%)

Query: 193 LLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDS 252
           L V ++MLR   +PDV     +++         +A ++   M + G  P IVTYN +++ 
Sbjct: 178 LAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNG 237

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
            C+EG + +A+E L  +   GC PN V+YN+++ G       E A  L+ +M + G   +
Sbjct: 238 ICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPN 297

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
             ++N +I     KGL+  AL + E++   G  P   +YN L++  CK  ++  A     
Sbjct: 298 VVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLD 357

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
            M+ +   PDI+SYNTLL   CRSG +  A  L  +L+ +   P +++YNT+IDGL + G
Sbjct: 358 LMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAG 417

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
             + A +L   M+++G+ PD+ITY+ +  G C+   +  A   F ++   G++P+   Y 
Sbjct: 418 KTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYN 477

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
             I G  K  +T  A  L   M+  G  P+  TY +L+ GL   G ++EA +LL ++   
Sbjct: 478 AIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSR 537

Query: 553 GFI 555
           G +
Sbjct: 538 GVV 540



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 179/341 (52%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +LL    K+S  +Q + + ++M   G  PD+   N ++  +   G    A E  + +  +
Sbjct: 198 ILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSY 257

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G +P+ V+YN +L   C     ++A EL+ EM  +GC PN VT+N+LI+   R G +E A
Sbjct: 258 GCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPA 317

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             ++  + K G   ++ SYNP++  + ++  + +A+   + MV+RG  P + +YN L+  
Sbjct: 318 LEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTA 377

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           LC+ G V  A     ++  K   P +ISYNT++ G  ++G   EA  L +E+ S+ L P 
Sbjct: 378 LCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPD 437

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           ++TY+T+  GLCR   +E A +    + + GI P+ + Y  ++ G CK      A + F 
Sbjct: 438 IITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFA 497

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
            M+  G  P+   YT  I G    G   EA  L +E+ ++G
Sbjct: 498 YMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 538



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 121/255 (47%), Gaps = 11/255 (4%)

Query: 473 REFFNEMLR---KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
           R   +E LR      +PD       I      G T+EA R+   + A G  PD++ YN +
Sbjct: 78  RGELDEALRLVGSARRPDAGTCAALIKKLSASGRTAEARRV---LAACG--PDVMAYNAM 132

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           V G C  G L+ A  L+ +M  +   PD  TY ++I      G       + + MLR+  
Sbjct: 133 VAGYCGAGQLDAARRLVAEMPVE---PDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRC 189

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
            P +VTYT+L+ A   R   + A     EM+ KG  P+++TYN ++NG+C+  R+D A  
Sbjct: 190 VPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIE 249

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQL 709
              ++   G  PN  +Y I++   C A  W++A  L  EM  +   P+  T + L+    
Sbjct: 250 FLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLC 309

Query: 710 DKDYKVHAVEYLESL 724
            K     A+E LE +
Sbjct: 310 RKGLVEPALEVLEQI 324



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 125/244 (51%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           ++   ++L+    +K +VE  L V  ++ + G  P+  + N ++          KA    
Sbjct: 297 NVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFL 356

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
            +M   G  P IV+YNT+L + C+ GE+  A+ELL +++ +GC+P  ++YN +I G ++ 
Sbjct: 357 DLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKA 416

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G+ ++A  L+ +M+  GL+    +Y+ I  G   +  + +A+    ++   G+ P    Y
Sbjct: 417 GKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLY 476

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           N +I GLCK      A   F  M+    +P+  +Y  L+ G    G I EA  L DEL S
Sbjct: 477 NAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCS 536

Query: 412 RNLV 415
           R +V
Sbjct: 537 RGVV 540


>gi|297847648|ref|XP_002891705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297337547|gb|EFH67964.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 823

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 152/505 (30%), Positives = 252/505 (49%), Gaps = 40/505 (7%)

Query: 205 LPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT--MLDSFCKEGEMQEA 262
           +PDV  CN ++ ++  +     AR+VY  M E G    +  Y+T  M+   C EG+++E 
Sbjct: 167 VPDVIACNALLSLVVKSRRLEDARKVYDEMCERG--GCVDNYSTCIMVKGMCSEGKVEEG 224

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
            +L+ +  G+GC PN V YN +I G+ + G++E A+ + +++   G   +  ++  +I G
Sbjct: 225 RKLIEDRWGKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKGFMPTLETFGTMING 284

Query: 323 YSEKGLLVEALNLEEEMVTRGV-----------------------------------APT 347
           + +KG  V +  L EE+  RG+                                    P 
Sbjct: 285 FCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVDPAESIRWIVANDCKPD 344

Query: 348 LATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFD 407
           +ATYNILI  LCK G+   A     E  +K +I   +SY  L+  YC+S     A  L  
Sbjct: 345 IATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKEYDIASKLLL 404

Query: 408 ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG 467
           +L  R   P +VTY  LI GL   G ++ A  +K  +I++G+ PD   Y ++++G CK G
Sbjct: 405 QLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTG 464

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
               A+  F+EML + + PD + Y T I G ++ GD  EA ++    + KG   D++ +N
Sbjct: 465 RFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHN 524

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
            ++ G C+ G L+EA   + +M  +  +PD  TY++II   ++  D+     +F +M + 
Sbjct: 525 AMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKN 584

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR-LRRIDQ 646
              P +VTYT LI+    +G   LA   F EMQ + + PNV+TY  LI    +    +++
Sbjct: 585 KCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFAKESSTLEK 644

Query: 647 AYGLFIDMEEEGILPNKYTYTILIN 671
           A   +  M     +PN+ T+  L+ 
Sbjct: 645 AVYYWELMMTNKCVPNEVTFNCLLQ 669



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 147/570 (25%), Positives = 257/570 (45%), Gaps = 54/570 (9%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K   +E   LVF ++   G +P ++    +I      G  V +  +   + E G++  
Sbjct: 250 YCKLGDIENAKLVFKELKLKGFMPTLETFGTMINGFCKKGDFVASDRLLEEVKERGLRVC 309

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +   N ++D+  + G   +  E +  +    C P+  TYN+LI    + G+ E A GL+ 
Sbjct: 310 VWFLNNIIDAKYRHGFKVDPAESIRWIVANDCKPDIATYNILINRLCKEGKKEVAAGLLD 369

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +  K GL ++  SY P+I  Y +      A  L  ++  RG  P + TY ILI+GL   G
Sbjct: 370 EASKKGLILTNLSYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSG 429

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            + DA +   +++ + V PD   YN L+ G C++G    A LLF E+  R+++P    Y 
Sbjct: 430 HMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYA 489

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           TLIDG  R GD + A+++    + +G+  DV+ +  M+ G C+ G L  A    N M  +
Sbjct: 490 TLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEE 549

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
            L PD+F Y+T I G +K  D + A ++  +M      P+++TY  L++G C  G    A
Sbjct: 550 HLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLA 609

Query: 543 NELLRKMVGDGFIPDHITYTSIIHA-SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
            E  ++M     +P+ +TYT++I + + E   L +    +  M+     P  VT+  L+ 
Sbjct: 610 EETFKEMQSRDLVPNVVTYTTLIRSFAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQ 669

Query: 602 A--------------------------------------HAA-----------RGRLELA 612
                                                  H A            G ++ A
Sbjct: 670 GFVKKTSGRFLGEPDGFNHGQSFLFFEFFHRMKSDGWSDHGAAYNSVLVCLCVHGMVKTA 729

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL-FIDMEEEGILPNKYTYTILIN 671
            M    M  KG  P+ +++ A+++G C +    Q   + F +++E+G L     Y+ ++ 
Sbjct: 730 CMLQDRMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFRNLDEKG-LEVAVRYSRVLE 788

Query: 672 ENCNAGNWQEALRLYKEMLDRE--IEPDYC 699
           ++       EA  +   M+++    EP+ C
Sbjct: 789 QHLPKAVICEASTILHAMVEKADTKEPEIC 818


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 150/429 (34%), Positives = 213/429 (49%), Gaps = 41/429 (9%)

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
            T+N ML   C  G+   ALELL +M      PN VTYN                     
Sbjct: 484 TTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNT-------------------- 519

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG-VAPTLATYNILIYGLCKWG 362
                          +I G+  +G +  AL++  EM  RG +AP   TY  +I G CK G
Sbjct: 520 ---------------VIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVG 564

Query: 363 RVSDARHRFFEMLRKN-VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           RV +A   F EML K  V P+ + YN L+ GYC  G +  A L  D +  R +  TV TY
Sbjct: 565 RVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATY 624

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           N L+  L   G    A +L E M  +G+ PDV TY I++NG CK GN+  A E F  M R
Sbjct: 625 NLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 684

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
           +G++     YT  I    K G   E  +L +E + +G  PDL+ YN L++     G+++ 
Sbjct: 685 RGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDR 744

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A E++ +M      PD +TY +++     +G +   R L + M  +G+ P LVTY  LI 
Sbjct: 745 AFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLIS 804

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
            ++ +G ++ A    +EM  KG  P ++TYNALI GLC+  + D A  +  +M E GI P
Sbjct: 805 GYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITP 864

Query: 662 NKYTYTILI 670
           +  TY  LI
Sbjct: 865 DDSTYISLI 873



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 142/413 (34%), Positives = 219/413 (53%), Gaps = 56/413 (13%)

Query: 192 CLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLD 251
           C   FN MLR+               L   G   +A E+ R M     +P+ VTYNT++ 
Sbjct: 482 CTTTFNIMLRH---------------LCSAGKPARALELLRQMP----RPNAVTYNTVIA 522

Query: 252 SFCKEGEMQEALELLWEMQGRG-CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG-L 309
            FC  G +Q AL+++ EM+ RG  +PN  TY  +I+G+ + G +++A  +  +ML  G +
Sbjct: 523 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 582

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
           K  A  YN +I GY ++G L  AL   + MV RGVA T+ATYN+L++ L   GR ++A  
Sbjct: 583 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 642

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
              EM  K + PD+ +YN L+ G+C+ GN+ +A  +F+ +  R +  TVVTY  LI  L 
Sbjct: 643 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 702

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVN---------------------------- 461
           + G ++   +L +  + +GI PD++ Y  ++N                            
Sbjct: 703 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 762

Query: 462 -------GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
                  G C +G +  AR+  +EM  +G+QPD   Y T I+G    GD  +A R++ EM
Sbjct: 763 TYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 822

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
           + KGF P L+TYN L+ GLCK G  ++A  ++++MV +G  PD  TY S+I  
Sbjct: 823 MNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 875



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 131/404 (32%), Positives = 219/404 (54%), Gaps = 10/404 (2%)

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M  L L +S  S +P++           A  L  +M    +     T+NI++  LC  G+
Sbjct: 443 MKSLSLPISTASLHPLLSALPS----APAFALFADMFRLRLPLCTTTFNIMLRHLCSAGK 498

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN-LVPTVVTYN 422
            +    R  E+LR+   P+ ++YNT++ G+C  G +  A  +  E+R R  + P   TY 
Sbjct: 499 PA----RALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYG 554

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQG-ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           T+I G C+ G ++ A ++ + M+ +G + P+ + Y  ++ G C  G L  A  + + M+ 
Sbjct: 555 TVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE 614

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
           +G+      Y   +      G  +EAY L EEM  KG  PD+ TYN+L++G CK G++++
Sbjct: 615 RGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKK 674

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A E+   M   G     +TYT++I+A  + G ++    LF+  +R+G+ P LV Y  LI+
Sbjct: 675 ALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALIN 734

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
           +H+  G ++ AF    EM+ K I P+ +TYN L+ GLC L R+D+A  L  +M E GI P
Sbjct: 735 SHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQP 794

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +  TY  LI+     G+ ++ALR+  EM+++   P   T++AL+
Sbjct: 795 DLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALI 838



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 131/411 (31%), Positives = 206/411 (50%), Gaps = 6/411 (1%)

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  L  DM +L L +   ++N ++      G    AL L  +M      P   TYN +I 
Sbjct: 467 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 522

Query: 357 GLCKWGRVSDARHRFFEML-RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
           G C  GRV  A     EM  R  + P+  +Y T++ G+C+ G + EA  +FDE+ ++  V
Sbjct: 523 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 582

Query: 416 -PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P  V YN LI G C  G L+ A   ++ M+ +G+   V TY ++V+     G  + A E
Sbjct: 583 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 642

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
              EM  KGL PD F Y   I G  K G+  +A  + E M  +G    ++TY  L++ L 
Sbjct: 643 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 702

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           K G ++E ++L  + V  G  PD + Y ++I++    G++ R  ++   M +K ++P  V
Sbjct: 703 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 762

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           TY  L+      GR++ A     EM  +GI+P+++TYN LI+G      +  A  +  +M
Sbjct: 763 TYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 822

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             +G  P   TY  LI   C  G   +A  + KEM++  I PD  T+ +L+
Sbjct: 823 MNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 873



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/353 (32%), Positives = 184/353 (52%), Gaps = 2/353 (0%)

Query: 183 YTKKSMVEQCLLVFNKML-RNGLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMGEFGIK 240
           +  +  V+  L +  +M  R G+ P+      +I      G   +A +V+  M+ +  +K
Sbjct: 524 FCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVK 583

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P  V YN ++  +C +G++  AL     M  RG +    TYN+L+     +G   +A  L
Sbjct: 584 PEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYEL 643

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           + +M   GL     +YN +I G+ ++G + +AL + E M  RGV  T+ TY  LIY L K
Sbjct: 644 VEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSK 703

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G+V +    F E +R+ + PD++ YN L+  +  SGNI  AF +  E+  + + P  VT
Sbjct: 704 KGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 763

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YNTL+ GLC  G ++ A++L + M  +GI PD++TY  +++G    G++  A    NEM+
Sbjct: 764 YNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMM 823

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
            KG  P    Y   I G  K G   +A  + +EM+  G  PD  TY  L+ GL
Sbjct: 824 NKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 876



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 75/228 (32%), Positives = 124/228 (54%)

Query: 165 GGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS 224
           GG      +   ++L+  + K+  V++ L +F  M R G+   V     +I  L   G  
Sbjct: 648 GGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQV 707

Query: 225 VKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVL 284
            +  +++      GI+P +V YN +++S    G +  A E++ EM+ +  +P+ VTYN L
Sbjct: 708 QETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTL 767

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           + G    G +++AR LI +M + G++    +YN +I GYS KG + +AL +  EM+ +G 
Sbjct: 768 MRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGF 827

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
            PTL TYN LI GLCK G+  DA +   EM+   + PD  +Y +L+ G
Sbjct: 828 NPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 875



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 104/190 (54%), Gaps = 2/190 (1%)

Query: 171 VSIKILDLLLLIY--TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR 228
           V   ++    LIY  +KK  V++   +F++ +R G+ PD+   N +I     +G   +A 
Sbjct: 687 VRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAF 746

Query: 229 EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
           E+   M +  I P  VTYNT++   C  G + EA +L+ EM  RG  P+ VTYN LI+G+
Sbjct: 747 EIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGY 806

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
           S  G+++ A  +  +M+  G   +  +YN +I G  + G   +A N+ +EMV  G+ P  
Sbjct: 807 SMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDD 866

Query: 349 ATYNILIYGL 358
           +TY  LI GL
Sbjct: 867 STYISLIEGL 876



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 10/110 (9%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKA--REVYRMMGEF---GIKPSI 243
           V++   + ++M   G+ PD+   N +I     +G+S+K   ++  R+  E    G  P++
Sbjct: 777 VDEARKLIDEMTERGIQPDLVTYNTLI-----SGYSMKGDVKDALRIRNEMMNKGFNPTL 831

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           +TYN ++   CK G+  +A  ++ EM   G +P+  TY  LI G +   E
Sbjct: 832 LTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 881



 Score = 39.7 bits (91), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 37/76 (48%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y+ K  V+  L + N+M+  G  P +   N +I+ L  NG    A  + + M E GI P 
Sbjct: 806 YSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPD 865

Query: 243 IVTYNTMLDSFCKEGE 258
             TY ++++    E E
Sbjct: 866 DSTYISLIEGLTTEDE 881


>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g09680-like [Glycine max]
          Length = 509

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 127/368 (34%), Positives = 203/368 (55%), Gaps = 3/368 (0%)

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
           E++  G  P    +N+L++G CK G V  AR  F E+ ++ + P ++S+NTL+ G C++G
Sbjct: 132 EVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAG 191

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
            + E F L   + S  + P V T++ LI+GLC+ G L+    L + M  +G++P+ +T+T
Sbjct: 192 AVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFT 251

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
           ++++G CK G + +A + F  ML +G++PD   Y   I G  K+GD  EA RL  EM A 
Sbjct: 252 VLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSAS 311

Query: 518 GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
           G  PD IT+  L+ G CK G +E A E+ R+MV +G   D + +T +I      G +   
Sbjct: 312 GLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDA 371

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
             +  +ML  G  P   TYT+++     +G + + F    EMQ  G  P V+TYNAL+NG
Sbjct: 372 ERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNG 431

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           LC+  ++  A  L   M   G+ PN  TY IL+  +   G+  +      E   + +  D
Sbjct: 432 LCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGSSVDVDIFNSE---KGLVKD 488

Query: 698 YCTHSALL 705
           Y +++AL+
Sbjct: 489 YASYTALV 496



 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 132/388 (34%), Positives = 215/388 (55%), Gaps = 11/388 (2%)

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           R  ELE++     ++L  G   +   +N ++ G+ + G +  A  + +E+  RG+ PT+ 
Sbjct: 119 RPVELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVV 178

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           ++N LI G CK G V +       M  + V PD+ +++ L+ G C+ G + E  LLFDE+
Sbjct: 179 SFNTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEM 238

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
             + LVP  VT+  LIDG C+ G +++A +  + M+ QG+ PD++TY  ++NG CK+G+L
Sbjct: 239 CGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDL 298

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             AR   NEM   GL+PDR  +TT I G  K GD   A  ++  M+ +G   D + + VL
Sbjct: 299 KEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVL 358

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           + GLC+ G + +A  +LR M+  GF PD  TYT ++    + G++  G  L   M   G 
Sbjct: 359 ISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGH 418

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
            P +VTY  L++    +G+++ A M    M   G+ PN ITYN L+ G          +G
Sbjct: 419 VPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEG-------HSKHG 471

Query: 650 LFIDME----EEGILPNKYTYTILINEN 673
             +D++    E+G++ +  +YT L+NE+
Sbjct: 472 SSVDVDIFNSEKGLVKDYASYTALVNES 499



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 123/379 (32%), Positives = 214/379 (56%), Gaps = 3/379 (0%)

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
           E++ +     E+   G  PN   +NVL+ GF + G +  AR +  ++ K GL+ +  S+N
Sbjct: 122 ELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFN 181

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            +I G  + G + E   L+  M +  V P + T++ LI GLCK GR+ +    F EM  K
Sbjct: 182 TLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGK 241

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
            ++P+ +++  L+ G C+ G +  A   F  + ++ + P +VTYN LI+GLC+ GDL+ A
Sbjct: 242 GLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEA 301

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
           ++L   M   G+ PD IT+T +++G CK G++  A E    M+ +G++ D  A+T  I+G
Sbjct: 302 RRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISG 361

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
             + G   +A R+  +ML+ GF PD  TY ++V   CK G++    +LL++M  DG +P 
Sbjct: 362 LCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPG 421

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
            +TY ++++   + G ++  + L + ML  G++P  +TY +L+  H+  G      ++ S
Sbjct: 422 VVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGSSVDVDIFNS 481

Query: 618 EMQVKGIRPNVITYNALIN 636
           E   KG+  +  +Y AL+N
Sbjct: 482 E---KGLVKDYASYTALVN 497



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 118/335 (35%), Positives = 187/335 (55%)

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
           + E+L     P+   +N L++G+C+ G +G A L+FDE+  R L PTVV++NTLI G C+
Sbjct: 130 YLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCK 189

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
            G +E   +LK  M ++ + PDV T++ ++NG CK G L      F+EM  KGL P+   
Sbjct: 190 AGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVT 249

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           +T  I G+ K G    A +  + MLA+G  PDL+TYN L++GLCK+G L+EA  L+ +M 
Sbjct: 250 FTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMS 309

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
             G  PD IT+T++I    + GD+    ++   M+ +G+    V +TVLI      GR+ 
Sbjct: 310 ASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVH 369

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
            A     +M   G +P+  TY  +++  C+   +   + L  +M+ +G +P   TY  L+
Sbjct: 370 DAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALM 429

Query: 671 NENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           N  C  G  + A  L   ML+  + P+  T++ LL
Sbjct: 430 NGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILL 464



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 108/342 (31%), Positives = 178/342 (52%), Gaps = 3/342 (0%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           AR V+  + + G++P++V++NT++   CK G ++E   L   M+     P+  T++ LI 
Sbjct: 161 ARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALIN 220

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G  + G L++   L  +M   GL  +  ++  +I G  + G +  AL   + M+ +GV P
Sbjct: 221 GLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRP 280

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
            L TYN LI GLCK G + +AR    EM    + PD I++ TL+ G C+ G++  A  + 
Sbjct: 281 DLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIK 340

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
             +    +    V +  LI GLCR G +  A+++  +M++ G  PD  TYT++V+  CK 
Sbjct: 341 RRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKK 400

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           GN+ M  +   EM   G  P    Y   + G  K G    A  L + ML  G  P+ ITY
Sbjct: 401 GNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITY 460

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
           N+L+ G  K GS  + +    +    G + D+ +YT++++ S
Sbjct: 461 NILLEGHSKHGSSVDVDIFNSE---KGLVKDYASYTALVNES 499



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 103/311 (33%), Positives = 165/311 (53%), Gaps = 3/311 (0%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   VE+   +   M    + PDV   + +I  L   G   +   ++  M   G+ P+ V
Sbjct: 189 KAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGV 248

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           T+  ++D  CK G++  AL+    M  +G  P+ VTYN LI G  + G+L++AR L+ +M
Sbjct: 249 TFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEM 308

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
              GL+    ++  +I G  + G +  AL ++  MV  G+      + +LI GLC+ GRV
Sbjct: 309 SASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRV 368

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            DA     +ML     PD  +Y  ++  +C+ GN+   F L  E++S   VP VVTYN L
Sbjct: 369 HDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNAL 428

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           ++GLC+ G ++ A+ L + M+N G+ P+ ITY I++ G  K G+ S+  + FN    KGL
Sbjct: 429 MNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGS-SVDVDIFNS--EKGL 485

Query: 485 QPDRFAYTTQI 495
             D  +YT  +
Sbjct: 486 VKDYASYTALV 496



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 87/273 (31%), Positives = 153/273 (56%)

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
           +LE +      +++ G  P+   + ++++G CK+G +  AR  F+E+ ++GL+P   ++ 
Sbjct: 122 ELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFN 181

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
           T I+G  K G   E +RL+  M ++   PD+ T++ L++GLCK G L+E + L  +M G 
Sbjct: 182 TLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGK 241

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
           G +P+ +T+T +I    + G +      F  ML +G+ P LVTY  LI+     G L+ A
Sbjct: 242 GLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEA 301

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
               +EM   G+RP+ IT+  LI+G C+   ++ A  +   M EEGI  +   +T+LI+ 
Sbjct: 302 RRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISG 361

Query: 673 NCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            C  G   +A R+ ++ML    +PD  T++ ++
Sbjct: 362 LCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVV 394


>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
 gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 167/621 (26%), Positives = 304/621 (48%), Gaps = 18/621 (2%)

Query: 87  VSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWV 146
           V  P L++++L +  + P  AL  F      PG     FVF  IL  L++  L+     +
Sbjct: 7   VISPTLVLKLL-KAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVVHVGRI 65

Query: 147 VETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLR-NGLL 205
           V+ +         DV +                +  Y K SM +Q L +F  M+   G  
Sbjct: 66  VDLMRAQRCTCSEDVALSA--------------IKAYAKCSMPDQALNLFQNMVDIFGCN 111

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P +++ N ++    ++    +A   +      G+ P++ TYN ++   CK+ + ++   L
Sbjct: 112 PGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGL 171

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           L  M   G +P+ ++Y  LI   +++G L  A  L  +M   G+      YN +I G+  
Sbjct: 172 LTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLR 231

Query: 326 KGLLVEALNLEEEMVTR-GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDII 384
           KG  V+A  + + ++T   V P++ TYNI+I GLCK G++ ++   +  M +    PD+ 
Sbjct: 232 KGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLF 291

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
           +++++++G  ++GN   A  +F E+    L P V TYN ++ GL R G L    +L  N+
Sbjct: 292 TFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFEL-WNV 350

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
           +++    ++++Y +++ G      +  A  ++  +  +GL+ D   Y   I G  K G  
Sbjct: 351 MSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYL 410

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
           ++A R+ EE   +G   D   Y+ +VHGLCK G LE+A EL+ +M  +    +   + S+
Sbjct: 411 NKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSL 470

Query: 565 IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
           I+  +    L     +   M  K  +PT+V+Y  +I+      R   A++   EM  +G+
Sbjct: 471 INGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGL 530

Query: 625 RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
           +P++ITY+ LI+GLCR  ++D A  L+     + + P+   + I+I+  C A     AL 
Sbjct: 531 KPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALE 590

Query: 685 LYKEMLDREIEPDYCTHSALL 705
           ++ +M      PD  TH+ ++
Sbjct: 591 IFTQMRQVNCVPDLVTHNTIM 611



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 122/467 (26%), Positives = 232/467 (49%), Gaps = 36/467 (7%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           S++  ++++    K   +++ + ++N+M +N   PD+   + +I  L   G    A +V+
Sbjct: 254 SVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVF 313

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
           + M E G+ P + TYN ML    + G++ +  EL W +  +    N V+YN+LI G   N
Sbjct: 314 QEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFEL-WNVMSKNNCCNIVSYNMLIQGLLDN 372

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
            ++EQA    + + + GLK  + +Y  +I G  + G L +AL + EE    G       Y
Sbjct: 373 KKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAY 432

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           + +++GLCK G +  A     +M +     +   +N+L+ GY R+  + EA  +  E++S
Sbjct: 433 SSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKS 492

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           ++  PTVV+YNT+I+GLC+      A    + M+ +G+ PD+ITY+++++G C+   + M
Sbjct: 493 KDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDM 552

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A   +++ + K L+                                   PDL  +N+++H
Sbjct: 553 ALNLWHQCINKRLK-----------------------------------PDLQMHNIIIH 577

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           GLC    ++ A E+  +M     +PD +T+ +I+    + GD      +++ +L  GL P
Sbjct: 578 GLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQP 637

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
            +++Y +      +  R+  A  +  +   +GI PN  T+N L+  +
Sbjct: 638 DIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAV 684



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/411 (28%), Positives = 209/411 (50%), Gaps = 15/411 (3%)

Query: 123 DEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLI 182
           D F F +++  L ++G   +A  V +             +I  GLS    ++  + +L  
Sbjct: 289 DLFTFSSMIHGLSKAGNFNAAEKVFQE------------MIESGLSP--DVRTYNAMLSG 334

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
             +   + +C  ++N M +N    ++ + N +I+ L DN    +A   ++++ E G+K  
Sbjct: 335 LFRTGKLNKCFELWNVMSKNNCC-NIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKAD 393

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             TY  +++  CK G + +AL +L E +  G   +   Y+ ++ G  + G LEQA  LI 
Sbjct: 394 STTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIH 453

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M K   K+++H +N +I GY     L EA+++  EM ++  APT+ +YN +I GLCK  
Sbjct: 454 QMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAE 513

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R SDA     EML + + PD+I+Y+ L+ G CR   +  A  L+ +  ++ L P +  +N
Sbjct: 514 RFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHN 573

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            +I GLC    ++VA ++   M     +PD++T+  ++ G  K G+   A + ++ +L  
Sbjct: 574 IIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEA 633

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
           GLQPD  +Y     G       S+A     + L +G  P+  T+NVLV  +
Sbjct: 634 GLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAV 684



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 107/345 (31%), Positives = 178/345 (51%), Gaps = 2/345 (0%)

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           P I S+N++L  +  S    EA L F   ++  + P + TYN LI   C+    E  + L
Sbjct: 112 PGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGL 171

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
              M   G+ PD+++Y  ++N   K GNL  A E F+EM  +G+ PD   Y   I G L+
Sbjct: 172 LTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLR 231

Query: 501 LGDTSEAYRLQEEMLAKG-FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
            GD  +A  + + +L +    P + TYN++++GLCKLG L+E+ E+  +M  +   PD  
Sbjct: 232 KGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLF 291

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
           T++S+IH   + G+      +F  M+  GLSP + TY  ++      G+L   F  ++ M
Sbjct: 292 TFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVM 351

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
             K    N+++YN LI GL   ++++QA   +  + E G+  +  TY +LIN  C  G  
Sbjct: 352 S-KNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYL 410

Query: 680 QEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
            +ALR+ +E  +   + D   +S+++     K     AVE +  +
Sbjct: 411 NKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQM 455



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 82/160 (51%), Gaps = 3/160 (1%)

Query: 566 HASLEMGDLRRGRDLFNNMLRK-GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
           +A   M D  +  +LF NM+   G +P + ++  +++A     +   A ++F+  Q  G+
Sbjct: 88  YAKCSMPD--QALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGM 145

Query: 625 RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
            PN+ TYN LI   C+ R+ ++  GL   M E G+ P+  +Y  LIN    +GN  +A+ 
Sbjct: 146 SPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVE 205

Query: 685 LYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           L+ EM  R + PD   ++ L+   L K   V A E  + L
Sbjct: 206 LFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRL 245



 Score = 45.1 bits (105), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 35/168 (20%), Positives = 69/168 (41%), Gaps = 21/168 (12%)

Query: 580 LFNNMLRKGLSPTLVTYT--------------------VLIHAHAARGRLELAFMYFSEM 619
           +F+++LR+ + P LV +                       I A+A     + A   F  M
Sbjct: 45  VFHHILRRLMDPKLVVHVGRIVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNM 104

Query: 620 -QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGN 678
             + G  P + ++N+++N      +  +A   F   +  G+ PN  TY ILI  +C    
Sbjct: 105 VDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQ 164

Query: 679 WQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
           +++   L   M +  + PD  ++  L+         + AVE  + +++
Sbjct: 165 FEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSV 212


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 144/458 (31%), Positives = 244/458 (53%), Gaps = 9/458 (1%)

Query: 174 KILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNC--NRIIKVLRDNGFSVKAREVY 231
           ++ ++++  Y +   ++  +  FN+M+  G +P   NC  N +  V+  + F+    + +
Sbjct: 95  RLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPG-SNCFNNLLTFVVGSSSFN----QWW 149

Query: 232 RMMGEFGIKP--SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
               E  IK    + ++  ++   C+ GE++++ +LL E++  G SPN V Y  LI G  
Sbjct: 150 CFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCC 209

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           + GE+E+A+ L  +M K GL  +  +Y  +I G  + G+  +   + E+M   GV P L 
Sbjct: 210 KKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLY 269

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           TYN ++  LCK GR  DA   F EM  + V  +I++YNTL+ G CR     EA  + D++
Sbjct: 270 TYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQM 329

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
           +S  + P ++TYNTLIDG C  G L  A  L  ++ ++G+ P ++TY ++V+G C+ G+ 
Sbjct: 330 KSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDT 389

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
           S A +   EM  +G++P +  YT  I    +  +   A +L+  M   G  PD+ TY+VL
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVL 449

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           +HG C  G + EA+ L + MV     P+ + Y ++I    + G   R   LF +M  K L
Sbjct: 450 IHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKEL 509

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
           +P + +Y+ LI       +L+ A     +M   GI P+
Sbjct: 510 APNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPS 547



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 123/451 (27%), Positives = 230/451 (50%), Gaps = 1/451 (0%)

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           Y  +++++ +   +  ++    EM  +G  P    +N L+T    +    Q      +  
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNES- 155

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
           K+ + +  +S+  +I G  E G + ++ +L  E+   G +P +  Y  LI G CK G + 
Sbjct: 156 KIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
            A+  FFEM +  ++ +  +Y  L++G  ++G   + F ++++++   + P + TYN ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVM 275

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           + LC+ G  + A ++ + M  +G+  +++TY  ++ G C+    + A +  ++M    + 
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVIN 335

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           P+   Y T I G   +G   +A  L  ++ ++G  P L+TYNVLV G C+ G    A ++
Sbjct: 336 PNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKM 395

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
           +++M   G  P  +TYT +I       ++     L ++M   GL P + TY+VLIH    
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCI 455

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
           +G++  A   F  M  K + PN + YN +I G C+     +A  LF DMEE+ + PN  +
Sbjct: 456 KGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVAS 515

Query: 666 YTILINENCNAGNWQEALRLYKEMLDREIEP 696
           Y+ LI   C     +EA  L ++M+D  I+P
Sbjct: 516 YSYLIRVLCKERKLKEAEDLVEKMIDSGIDP 546



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 212/398 (53%), Gaps = 3/398 (0%)

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS-DAR 368
           K  +  Y  II  Y +   L  ++    EMV +G  P    +N L+  +   G  S +  
Sbjct: 91  KTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVV--GSSSFNQW 148

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             FF   +  V+ D+ S+  ++ G C +G I ++F L  ELR     P VV Y TLIDG 
Sbjct: 149 WCFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGC 208

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G++E A+ L   M   G++ +  TYT++++G  K G      E + +M   G+ P+ 
Sbjct: 209 CKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNL 268

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
           + Y   +    K G T +A+++ +EM  +G   +++TYN L+ GLC+     EAN+++ +
Sbjct: 269 YTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQ 328

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M      P+ ITY ++I     +G L +   L  ++  +GLSP+LVTY VL+     +G 
Sbjct: 329 MKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGD 388

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
              A     EM+ +GI+P+ +TY  LI+   R   ++ A  L   MEE G++P+ +TY++
Sbjct: 389 TSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSV 448

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
           LI+  C  G   EA RL+K M+++ +EP+   ++ ++L
Sbjct: 449 LIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMIL 486



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 120/383 (31%), Positives = 199/383 (51%)

Query: 280 TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
           ++ ++I G    GE+E++  L+ ++ + G   +   Y  +I G  +KG + +A +L  EM
Sbjct: 165 SFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
              G+     TY +LI+GL K G        + +M    V P++ +YN ++   C+ G  
Sbjct: 225 GKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRT 284

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
            +AF +FDE+R R +   +VTYNTLI GLCR      A ++ + M +  I P++ITY  +
Sbjct: 285 KDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTL 344

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           ++G C +G L  A     ++  +GL P    Y   ++G  + GDTS A ++ +EM  +G 
Sbjct: 345 IDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGI 404

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
            P  +TY +L+    +  ++E A +L   M   G +PD  TY+ +IH     G +     
Sbjct: 405 KPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASR 464

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
           LF +M+ K L P  V Y  +I  +   G    A   F +M+ K + PNV +Y+ LI  LC
Sbjct: 465 LFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLC 524

Query: 640 RLRRIDQAYGLFIDMEEEGILPN 662
           + R++ +A  L   M + GI P+
Sbjct: 525 KERKLKEAEDLVEKMIDSGIDPS 547



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 110/345 (31%), Positives = 180/345 (52%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           KK  +E+   +F +M + GL+ +      +I  L  NG   +  E+Y  M E G+ P++ 
Sbjct: 210 KKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLY 269

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TYN +++  CK+G  ++A ++  EM+ RG S N VTYN LI G  R  +  +A  ++  M
Sbjct: 270 TYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQM 329

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
               +  +  +YN +I G+   G L +AL+L  ++ +RG++P+L TYN+L+ G C+ G  
Sbjct: 330 KSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDT 389

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
           S A     EM  + + P  ++Y  L+  + RS N+  A  L   +    LVP V TY+ L
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVL 449

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           I G C  G +  A +L ++M+ + + P+ + Y  M+ G CK G+   A   F +M  K L
Sbjct: 450 IHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKEL 509

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
            P+  +Y+  I    K     EA  L E+M+  G  P     N++
Sbjct: 510 APNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDTICNLI 554



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 1/164 (0%)

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           Y  II+A ++   L      FN M+ KG  P    +  L+            + +F+E +
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
           +K +  +V ++  +I G C    I++++ L +++ E G  PN   YT LI+  C  G  +
Sbjct: 157 IK-VVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 681 EALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           +A  L+ EM    +  +  T++ L+        K    E  E +
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKM 259


>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
 gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
          Length = 480

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 149/507 (29%), Positives = 253/507 (49%), Gaps = 42/507 (8%)

Query: 188 MVEQCLLVFNKMLRNGLLPDVKN-CNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTY 246
           +V Q   +  +M   G  PDV++ C  I    +   F     ++ RM+ E G+ P+ + Y
Sbjct: 9   LVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRML-EAGLFPNAILY 67

Query: 247 NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
           N ++   CK G + EA   L  M  + C+PN V+YN++I G+ +   +E+A   +R+M +
Sbjct: 68  NNLISCLCKAGMLAEAESYLKRMP-QHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEE 126

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
           LG   + H+Y+ I+  + + G + +A+++  EM  +G  P +  +N+L+ GL +  ++ +
Sbjct: 127 LGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHE 186

Query: 367 ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
           AR  F  M  +   PD+++YNT++ G C+   + EA  L + ++  ++ PT VTY TLID
Sbjct: 187 ARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLID 246

Query: 427 GLCRYGDLEVAQQLKENMINQGILP---DVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
            LC++  L+ A ++ E M  +G  P      +  I++NG CK      A+E F EM  +G
Sbjct: 247 HLCKFARLQQAYEVFEKMA-EGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRG 305

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           + P    Y T + G L      +A  L   ML +   P++ TY +L+  LCK   +EEA 
Sbjct: 306 ISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAF 365

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
           +LL  M   GF+                                   P+L  + VL+   
Sbjct: 366 KLLSAMRDKGFV-----------------------------------PSLKIWEVLLSRL 390

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
           A  GRL+ AF  + EM     +  V + N L++G+ R   +D+A      M + GI+P+K
Sbjct: 391 ARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDK 450

Query: 664 YTYTILINENCNAGNWQEALRLYKEML 690
           +TY  L+   C  G   +A +L +E++
Sbjct: 451 FTYDKLVVGLCWQGKADQARKLVEELV 477



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 133/448 (29%), Positives = 226/448 (50%), Gaps = 3/448 (0%)

Query: 261 EALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII 320
           +A  ++ EM+  G SP+  ++ +LI GF ++G  ++    +  ML+ GL  +A  YN +I
Sbjct: 12  QAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLI 71

Query: 321 CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
               + G+L EA +  + M  +  AP + +YNI+I G CK   +  A     EM      
Sbjct: 72  SCLCKAGMLAEAESYLKRM-PQHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHP 130

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           P   +Y++++  +C++GN+ +A  +F E+ ++   P +V +N L+ GL R   +  A++L
Sbjct: 131 PTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEAREL 190

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
             +M ++G  PDV+TY  M+ G CK   L  A      M ++ + P    YTT I    K
Sbjct: 191 FRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCK 250

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLV--HGLCKLGSLEEANELLRKMVGDGFIPDH 558
                +AY + E+M     P     Y+VL+  +GLCK     EA E+ ++M G G  P  
Sbjct: 251 FARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTV 310

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
           +TY +++   L    L+   +L   ML +  +P + TY +LI +     ++E AF   S 
Sbjct: 311 VTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSA 370

Query: 619 MQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGN 678
           M+ KG  P++  +  L++ L R  R+D A+ L+ +M          +  IL++     G+
Sbjct: 371 MRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGS 430

Query: 679 WQEALRLYKEMLDREIEPDYCTHSALLL 706
             EA    K+M D  I PD  T+  L++
Sbjct: 431 VDEAKDFLKQMTDTGIVPDKFTYDKLVV 458



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 138/480 (28%), Positives = 224/480 (46%), Gaps = 40/480 (8%)

Query: 146 VVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLL 205
           +VE  +      I++ +   G S  V    L  L+  + K    ++     ++ML  GL 
Sbjct: 4   LVEADLVAQAEAIVEEMKYAGFSPDVQSHCL--LIRGFFKSGSFQRGCSQLDRMLEAGLF 61

Query: 206 PDVKNCNRIIKVLRDNGFSV----------------------------KAREV------Y 231
           P+    N +I  L   G                               KAR +       
Sbjct: 62  PNAILYNNLISCLCKAGMLAEAESYLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAFL 121

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
           R M E G  P+   Y++++ SFCK G + +A+++  EM  +GC P+ V +NVL++G  R 
Sbjct: 122 REMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRA 181

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
            ++ +AR L R M   G K    +YN +I G  +   L EA+ L E M    V+PT  TY
Sbjct: 182 RKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTY 241

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIP---DIISYNTLLYGYCRSGNIGEAFLLFDE 408
             LI  LCK+ R+  A +  FE + +   P      S   L+ G C++   GEA  +F E
Sbjct: 242 TTLIDHLCKFARLQQA-YEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQE 300

Query: 409 LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
           +R R + PTVVTYNTL++GL     L+ A +L   M++Q   P++ TY I+++  CK   
Sbjct: 301 MRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQ 360

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
           +  A +  + M  KG  P    +   ++   + G   +A+ L +EM        + + N+
Sbjct: 361 VEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNI 420

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           L+ G+ + GS++EA + L++M   G +PD  TY  ++      G   + R L   ++R G
Sbjct: 421 LLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDG 480



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 121/375 (32%), Positives = 185/375 (49%), Gaps = 5/375 (1%)

Query: 325 EKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDII 384
           E  L+ +A  + EEM   G +P + ++ +LI G  K G       +   ML   + P+ I
Sbjct: 6   EADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAI 65

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
            YN L+   C++G + EA      +  ++  P VV+YN +IDG C+  ++E A      M
Sbjct: 66  LYNNLISCLCKAGMLAEAESYLKRM-PQHCAPNVVSYNIIIDGYCKARNIEKALAFLREM 124

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
              G  P    Y+ +V   CK GN+S A + F EM  KG +PD   +   ++G  +    
Sbjct: 125 EELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKI 184

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
            EA  L   M ++G  PD++TYN ++ GLCK   L+EA  LL +M  +   P  +TYT++
Sbjct: 185 HEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTL 244

Query: 565 IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA---ARGRLELAFMYFSEMQV 621
           I    +   L++  ++F  M       T   Y+VLI  +    AR   E   M F EM+ 
Sbjct: 245 IDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEM-FQEMRG 303

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
           +GI P V+TYN L+ GL    ++  A  L   M ++   PN +TY ILI+  C     +E
Sbjct: 304 RGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEE 363

Query: 682 ALRLYKEMLDREIEP 696
           A +L   M D+   P
Sbjct: 364 AFKLLSAMRDKGFVP 378



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/363 (31%), Positives = 173/363 (47%), Gaps = 3/363 (0%)

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           V+ A     EM      PD+ S+  L+ G+ +SG+        D +    L P  + YN 
Sbjct: 10  VAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNN 69

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           LI  LC+ G L  A+   + M  Q   P+V++Y I+++G CK  N+  A  F  EM   G
Sbjct: 70  LISCLCKAGMLAEAESYLKRM-PQHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELG 128

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
             P   AY++ +    K G+ S+A  +  EM AKG  PD++ +NVL+ GL +   + EA 
Sbjct: 129 HPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEAR 188

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
           EL R M   G  PD +TY ++I    +   L     L   M ++ +SPT VTYT LI   
Sbjct: 189 ELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHL 248

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALI--NGLCRLRRIDQAYGLFIDMEEEGILP 661
               RL+ A+  F +M           Y+ LI  NGLC+ RR  +A  +F +M   GI P
Sbjct: 249 CKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISP 308

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYL 721
              TY  L+    +    Q+A+ L   MLD+   P+  T+  L+      D    A + L
Sbjct: 309 TVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLL 368

Query: 722 ESL 724
            ++
Sbjct: 369 SAM 371



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 120/432 (27%), Positives = 207/432 (47%), Gaps = 6/432 (1%)

Query: 128 CTILEILIESGLLRSAYWVVETVVCVNMHGIL---DVLIGGGLSSCV-SIKILDLLLLIY 183
           C+ L+ ++E+GL  +A      + C+   G+L   +  +      C  ++   ++++  Y
Sbjct: 49  CSQLDRMLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQHCAPNVVSYNIIIDGY 108

Query: 184 TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
            K   +E+ L    +M   G  P     + I++     G   KA +V+  M   G +P I
Sbjct: 109 CKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDI 168

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           V +N +L    +  ++ EA EL   M  RGC P+ VTYN +I G  +  +L++A  L+  
Sbjct: 169 VNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLER 228

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN--ILIYGLCKW 361
           M +  +  +  +Y  +I    +   L +A  + E+M       T   Y+  ILI GLCK 
Sbjct: 229 MKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKA 288

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
            R  +A+  F EM  + + P +++YNTLL G   +  + +A  L   +  +   P + TY
Sbjct: 289 RRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTY 348

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
             LI  LC+   +E A +L   M ++G +P +  + ++++   + G L  A E + EM R
Sbjct: 349 EILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSR 408

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
              Q    +    + G L+ G   EA    ++M   G  PD  TY+ LV GLC  G  ++
Sbjct: 409 INCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQ 468

Query: 542 ANELLRKMVGDG 553
           A +L+ ++V DG
Sbjct: 469 ARKLVEELVRDG 480


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 156/525 (29%), Positives = 260/525 (49%), Gaps = 8/525 (1%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRII-KVLRDNGFSVKAREVYRMMGEFGIKP 241
           Y +  + EQ L +F ++   G  P VK  N ++  +L +N F +    +Y  M   G +P
Sbjct: 124 YRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQM-IEPIYSNMKRDGKEP 182

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
           ++ TYN +L + CK   +  A +LL EM  +GC P+ V+Y  +I+  S+ G++E+AR   
Sbjct: 183 NVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAR--- 239

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
              L +  + +   YN +I G+  +  + E   L  +MV +G+ P + TY+ +I  L   
Sbjct: 240 --ELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGI 297

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           G V  A   + +M  +   P++ ++ +L+ GY   G + EA  +++ +      P VV Y
Sbjct: 298 GNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAY 357

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           NTLI GLC +G +  A  +   M   G  P+V TY  +++G  K G+L  A E +N+M+ 
Sbjct: 358 NTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMT 417

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
            G  P+   YT+ +    +    S+A+ L E+M     PP+ +T+N  + GLC  G +E 
Sbjct: 418 NGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVEC 477

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A  L  +M   G  P+  TY  ++   L+   ++   +L   M  KG+   LVTY  +  
Sbjct: 478 AINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFG 537

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG-IL 660
                G+ E A     +M V G++P+ ITYN L    C   ++  A  L   +   G  +
Sbjct: 538 GFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWV 597

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           P    YT L+   CN    +EA+    +ML+  I  +  T +AL+
Sbjct: 598 PEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALV 642



 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 147/516 (28%), Positives = 243/516 (47%), Gaps = 40/516 (7%)

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
           +I   R  G + +A +++  + EFG +P++  YN +LD+   E   Q    +   M+  G
Sbjct: 120 VINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDG 179

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
             PN  TYN+L+    +N  ++ A  L+                                
Sbjct: 180 KEPNVYTYNILLKALCKNNRVDGACKLLV------------------------------- 208

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
               EM  +G  P + +Y  +I  + K G+V +AR      L     P++  YN L+ G+
Sbjct: 209 ----EMSNKGCEPDVVSYTTVISSMSKLGKVEEARE-----LSIRFQPNVSVYNALINGF 259

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
           CR   + E FLL  ++  + + P V+TY+T+I  L   G++E+A  +   M  +G  P+V
Sbjct: 260 CREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNV 319

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
            T+T ++ G    G +  A   +N M  +G +P+  AY T I G    G   EA  +  +
Sbjct: 320 YTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSK 379

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           M   G  P++ TY  L+ G  K G L  A+E+  KM+ +G IP+ + YTS+++       
Sbjct: 380 MERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSM 439

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
             +   L   M      P  VT+   I      GR+E A   F +M+  G  PN+ TYN 
Sbjct: 440 FSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNE 499

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
           +++GL +  RI +A  L  +MEE+G+  N  TY  +    CN G ++EAL+L  +ML   
Sbjct: 500 VLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGG 559

Query: 694 IEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLGAE 729
           ++PD  T++ L      +     A++ L+ L+ G +
Sbjct: 560 VKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGK 595



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 136/463 (29%), Positives = 232/463 (50%), Gaps = 6/463 (1%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           ++LL    K + V+    +  +M   G  PDV +   +I  +   G   +ARE+      
Sbjct: 188 NILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAREL-----S 242

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
              +P++  YN +++ FC+E +++E   LL +M  +G  PN +TY+ +I+  S  G +E 
Sbjct: 243 IRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVEL 302

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  +   M   G   + +++  ++ GY  +G ++EALN+   M   G  P +  YN LI+
Sbjct: 303 ALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIH 362

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           GLC  G++ +A     +M R    P++ +Y  L+ G+ ++G++  A  +++++ +   +P
Sbjct: 363 GLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIP 422

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
            VV Y ++++ LCR      A  L E M      P+ +T+   + G C  G +  A   F
Sbjct: 423 NVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLF 482

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
            +M + G  P+   Y   + G LK     EA  L  EM  KG   +L+TYN +  G C +
Sbjct: 483 CQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNV 542

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG-LSPTLVT 595
           G  EEA +LL KM+  G  PD ITY ++ +A    G ++    L + +   G   P +  
Sbjct: 543 GKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAA 602

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           YT L+     +  +E A +Y  +M  +GI  N  T+NAL+ GL
Sbjct: 603 YTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGL 645



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 146/500 (29%), Positives = 244/500 (48%), Gaps = 6/500 (1%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           ++KI + LL     ++  +    +++ M R+G  P+V   N ++K L  N     A ++ 
Sbjct: 148 TVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLL 207

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M   G +P +V+Y T++ S  K G+++EA EL    Q     PN   YN LI GF R 
Sbjct: 208 VEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQ-----PNVSVYNALINGFCRE 262

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
            ++++   L+  M++ G+  +  +Y+ +I   S  G +  AL +  +M  RG +P + T+
Sbjct: 263 YKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTF 322

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
             L+ G    GRV +A + +  M  +   P++++YNTL++G C  G +GEA  +  ++  
Sbjct: 323 TSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMER 382

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
               P V TY  LIDG  + GDL  A ++   M+  G +P+V+ YT MVN  C+    S 
Sbjct: 383 NGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQ 442

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A     +M      P+   + T I G    G    A  L  +M   G  P++ TYN ++ 
Sbjct: 443 AWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLD 502

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           GL K   ++EA EL+ +M   G   + +TY +I      +G       L   ML  G+ P
Sbjct: 503 GLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKP 562

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKG-IRPNVITYNALINGLCRLRRIDQAYGL 650
             +TY  L +A+  +G+++ A     ++   G   P V  Y +L+ G+C    +++A   
Sbjct: 563 DAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLY 622

Query: 651 FIDMEEEGILPNKYTYTILI 670
              M  EGI  N  T+  L+
Sbjct: 623 LDKMLNEGICLNAATWNALV 642



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 179/365 (49%), Gaps = 5/365 (1%)

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
           ++    T  TY I+I  L +   V   ++   +M  + +      +  ++  Y R G   
Sbjct: 72  SKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAE 131

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           +A  +F  +R     PTV  YN L+D +      ++ + +  NM   G  P+V TY I++
Sbjct: 132 QALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILL 191

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
              CK   +  A +   EM  KG +PD  +YTT I+   KLG   EA  L        F 
Sbjct: 192 KALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIR-----FQ 246

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           P++  YN L++G C+   ++E   LL +MV  G  P+ ITY+++I +   +G++     +
Sbjct: 247 PNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAV 306

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
           +  M  +G SP + T+T L+  +  RGR+  A   ++ M  +G  PNV+ YN LI+GLC 
Sbjct: 307 WAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCS 366

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
             ++ +A  +   ME  G  PN  TY  LI+    AG+   A  ++ +M+     P+   
Sbjct: 367 HGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVV 426

Query: 701 HSALL 705
           +++++
Sbjct: 427 YTSMV 431



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/232 (31%), Positives = 119/232 (51%), Gaps = 2/232 (0%)

Query: 182 IYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKP 241
           +  + SM  Q   +  KM  +   P+    N  IK L  +G    A  ++  M ++G  P
Sbjct: 433 VLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSP 492

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
           +I TYN +LD   KE  ++EALEL+ EM+ +G   N VTYN +  GF   G+ E+A  L+
Sbjct: 493 NIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLL 552

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV-APTLATYNILIYGLCK 360
             ML  G+K  A +YN +   Y  +G +  A+ L +++   G   P +A Y  L++G+C 
Sbjct: 553 GKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICN 612

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS-GNIGEAFLLFDELRS 411
              V +A     +ML + +  +  ++N L+ G   S G++G   +L D L S
Sbjct: 613 QIGVEEAVLYLDKMLNEGICLNAATWNALVRGLFNSLGHLGPIHILDDILTS 664



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 114/269 (42%), Gaps = 31/269 (11%)

Query: 468 NLSMAREFFNEMLR-KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           ++ +A  +F  +   K  Q  +  Y   I    +  D      L ++M  +G       +
Sbjct: 58  DIVLASNYFRSIANSKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLF 117

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
             +++   ++G  E+A ++  ++   G  P    Y  ++ A L     +    +++NM R
Sbjct: 118 INVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKR 177

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT---------------- 630
            G  P + TY +L+ A     R++ A     EM  KG  P+V++                
Sbjct: 178 DGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEE 237

Query: 631 --------------YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNA 676
                         YNALING CR  ++ + + L   M E+GI PN  TY+ +I+     
Sbjct: 238 ARELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGI 297

Query: 677 GNWQEALRLYKEMLDREIEPDYCTHSALL 705
           GN + AL ++ +M  R   P+  T ++L+
Sbjct: 298 GNVELALAVWAKMFVRGCSPNVYTFTSLM 326



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 113/253 (44%), Gaps = 20/253 (7%)

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML-----------AKGFPPDLIT 525
           N +L  G +P  +    +I   +K  D     R + +++           +K F    +T
Sbjct: 25  NPILNPGNKPPEYQ---EIKTPIKESDVVMRLRTETDIVLASNYFRSIANSKAFQHTQLT 81

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           Y +++  L +   ++    LL++M  +G       + ++I+    +G   +   +F  + 
Sbjct: 82  YQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRIR 141

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
             G  PT+  Y  L+ A  +  R ++    +S M+  G  PNV TYN L+  LC+  R+D
Sbjct: 142 EFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVD 201

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            A  L ++M  +G  P+  +YT +I+     G  +EA       L    +P+   ++A L
Sbjct: 202 GACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARE-----LSIRFQPNVSVYNA-L 255

Query: 706 LKQLDKDYKVHAV 718
           +    ++YKV  V
Sbjct: 256 INGFCREYKVKEV 268


>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
 gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
          Length = 660

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 165/552 (29%), Positives = 269/552 (48%), Gaps = 23/552 (4%)

Query: 171 VSIKILDLLLLIYTKKSMVEQCLLVFNKML--RNGLLPDVKNCNRIIK-VLRDNGFS--V 225
           V  +I++LLL    K   V+  + V ++ML   +   P+ K    +   +L+ +G    V
Sbjct: 41  VRNEIINLLL----KSGRVDNAMNVLDEMLLPESEFRPNDKTAGIVFNNLLKIDGLEGRV 96

Query: 226 KAREVYRMMGEFG---IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYN 282
           K  E+  ++ +FG   I P  +    ++   C+ G    A  +L  +       +    N
Sbjct: 97  KEDEIAGLVSKFGKHNIFPDTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCN 156

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII---CGYS--EKGLLV-EALNLE 336
            L+TG  +  E  +   L+R M  + ++ +  ++  +I   C +   +  L V E +  E
Sbjct: 157 ALLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGE 216

Query: 337 EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS 396
           +E     VAP    YN LI GLCK GR  +A     +M      P   ++N L+ GYCRS
Sbjct: 217 KEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRS 276

Query: 397 GNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
           G I  A  LF+E+ +  + P V+T NTL+DG+C++  +  A +    M  +G+  + +TY
Sbjct: 277 GEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTY 336

Query: 457 TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA 516
           T+ +N  C + N++ A EF +EM + G  PD   Y T I G  + G   +A  +  ++  
Sbjct: 337 TVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKE 396

Query: 517 KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
            GF  D + YNVL+   CK   L+ A E L +M   G  PD +TY ++I    ++G+ + 
Sbjct: 397 AGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKL 456

Query: 577 GRDLFNNML-RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ--VKGIRPNVITYNA 633
                  M   +GLSPT+ TY  LIHA+     ++ A   F EM      + PN + YN 
Sbjct: 457 AHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNI 516

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW-QEALRLYKEMLDR 692
           LI+ LC+  +++ A  L  DM+  G++PN  TY  +  +     NW  +A +L   M+++
Sbjct: 517 LIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIF-KALRDKNWLDKAFKLMDRMVEQ 575

Query: 693 EIEPDYCTHSAL 704
              PDY T   L
Sbjct: 576 ACNPDYITMEIL 587



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 166/554 (29%), Positives = 266/554 (48%), Gaps = 19/554 (3%)

Query: 188 MVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM----GEF--GIKP 241
           MV++ L  F+ +  +    +V+N   II +L  +G    A  V   M     EF    K 
Sbjct: 21  MVDEALAAFSTLDSHAKNTNVRN--EIINLLLKSGRVDNAMNVLDEMLLPESEFRPNDKT 78

Query: 242 SIVTYNTMLDSFCKEGEMQEA--LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
           + + +N +L     EG ++E     L+ +       P+ +    LI+   R+G    A  
Sbjct: 79  AGIVFNNLLKIDGLEGRVKEDEIAGLVSKFGKHNIFPDTIALTQLISKLCRSGNTNLAWN 138

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
           ++ +++ L     A   N ++ G  +     +   L  +M    + PT+ T+ ILI  LC
Sbjct: 139 ILDNLMMLNGLKDAAPCNALLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLC 198

Query: 360 KWGRVSDARHRFFEMLRKN------VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           K+ R+ DA   F +M  +       V PD I YNTL+ G C+ G   EA  L  ++RS  
Sbjct: 199 KFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQ 258

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
             PT  T+N LI+G CR G++EVA +L   M N  I P+VIT   +V+G CK   +S A 
Sbjct: 259 CAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAV 318

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
           EFF  M +KGL+ +   YT  I     + + ++A    +EM   G  PD + Y  L+ GL
Sbjct: 319 EFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGL 378

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
            + G L++A+ ++ K+   GF  D + Y  +I    +   L R ++  N M   G+ P  
Sbjct: 379 AQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDS 438

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEM-QVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
           VTY  LI   +  G  +LA  +  +M + +G+ P V TY ALI+  C    ID+A  +F 
Sbjct: 439 VTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFK 498

Query: 653 DMEE--EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLD 710
           +M      + PN   Y ILI+  C       AL L  +M  R + P+  T++++     D
Sbjct: 499 EMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRD 558

Query: 711 KDYKVHAVEYLESL 724
           K++   A + ++ +
Sbjct: 559 KNWLDKAFKLMDRM 572



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 107/374 (28%), Positives = 180/374 (48%), Gaps = 3/374 (0%)

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           + P  + YNT++D  CK G  +EAL L+ +M+   C+P   T+N LI G+ R+GE+E A 
Sbjct: 224 VAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAH 283

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L  +M    ++ +  + N ++ G  +   +  A+     M  +G+     TY + I   
Sbjct: 284 KLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAF 343

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C    ++ A     EM +    PD + Y TL+ G  ++G + +A  +  +L+        
Sbjct: 344 CNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDR 403

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           V YN LI   C+   L+ AQ+    M   G+ PD +TY  +++   K+GN  +A +F  +
Sbjct: 404 VCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKK 463

Query: 479 MLRK-GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM--LAKGFPPDLITYNVLVHGLCK 535
           M  + GL P  F Y   I       +  EA ++ +EM  +A   PP+ + YN+L+  LCK
Sbjct: 464 MTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCK 523

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
              +  A  LL  M   G +P+  TY SI  A  +   L +   L + M+ +  +P  +T
Sbjct: 524 QTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDYIT 583

Query: 596 YTVLIHAHAARGRL 609
             +L    +A G +
Sbjct: 584 MEILTEWLSAVGEI 597



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/443 (25%), Positives = 184/443 (41%), Gaps = 42/443 (9%)

Query: 299 GLIRDMLKLGLKVSAHSYNP-----IICGYSEKGLLVEALNLEEEMV--TRGVAPTLATY 351
           G++ + L     + +H+ N      II    + G +  A+N+ +EM+       P   T 
Sbjct: 20  GMVDEALAAFSTLDSHAKNTNVRNEIINLLLKSGRVDNAMNVLDEMLLPESEFRPNDKTA 79

Query: 352 NILIYGLCKW----GRVSDARHRFF--EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
            I+   L K     GRV +        +  + N+ PD I+   L+   CRSGN   A+ +
Sbjct: 80  GIVFNNLLKIDGLEGRVKEDEIAGLVSKFGKHNIFPDTIALTQLISKLCRSGNTNLAWNI 139

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
            D L   N +      N L+ GL +  +      L   M +  I P VIT+ I++N  CK
Sbjct: 140 LDNLMMLNGLKDAAPCNALLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCK 199

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
              +  A E F +M  KG + +   +                             PD I 
Sbjct: 200 FRRIDDALEVFEKM--KGEKEETKVFVA---------------------------PDTIM 230

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           YN L+ GLCK+G  EEA  L+ KM  D   P   T+  +I+     G++     LFN M 
Sbjct: 231 YNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEME 290

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
              + P ++T   L+       R+  A  +F  MQ KG++ N +TY   IN  C +  ++
Sbjct: 291 NAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMN 350

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +A     +M ++G  P+   Y  LI     AG   +A  +  ++ +     D   ++ L+
Sbjct: 351 KAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLI 410

Query: 706 LKQLDKDYKVHAVEYLESLTLGA 728
            +   K+    A E+L  + L  
Sbjct: 411 SEFCKKNKLDRAQEWLNEMELAG 433



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 147/332 (44%), Gaps = 40/332 (12%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y +   +E    +FN+M    + P+V   N ++  +  +     A E +R+M + G+K +
Sbjct: 273 YCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGN 332

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            VTY   +++FC    M +A+E L EM   GC P+ V Y  LI G ++ G L+ A  ++ 
Sbjct: 333 NVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVS 392

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            + + G  +    YN +I  + +K  L  A     EM   GV P   TYN LI    K G
Sbjct: 393 KLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIG 452

Query: 363 RVSDARHRFFEML--RKNVIPDIISYNTLLYGYCRSGNIGEAFLLF-------------- 406
               A H+F + +   + + P + +Y  L++ YC + NI EA  +F              
Sbjct: 453 NFKLA-HKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNT 511

Query: 407 -----------------------DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
                                  D+++ R ++P   TYN++   L     L+ A +L + 
Sbjct: 512 VIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDR 571

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           M+ Q   PD IT  I+      +G ++  ++F
Sbjct: 572 MVEQACNPDYITMEILTEWLSAVGEITKLKKF 603



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 120/255 (47%), Gaps = 3/255 (1%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
            ++M ++G  PD      +I  L   G    A  V   + E G     V YN ++  FCK
Sbjct: 356 LDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCK 415

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL-GLKVSAH 314
           + ++  A E L EM+  G  P+ VTYN LI+ FS+ G  + A   ++ M +  GL  +  
Sbjct: 416 KNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVF 475

Query: 315 SYNPIICGYSEKGLLVEALNLEEEM--VTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
           +Y  +I  Y     + EA+ + +EM  V   V P    YNILI  LCK  +V+ A     
Sbjct: 476 TYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLD 535

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
           +M  + V+P+  +YN++         + +AF L D +  +   P  +T   L + L   G
Sbjct: 536 DMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDYITMEILTEWLSAVG 595

Query: 433 DLEVAQQLKENMINQ 447
           ++   ++  +  +N+
Sbjct: 596 EITKLKKFTQGCMNR 610



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 111/253 (43%), Gaps = 17/253 (6%)

Query: 116 TQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKI 175
           ++ G   D  V+ T++  L ++G L  A  VV              L   G   C+    
Sbjct: 360 SKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSK------------LKEAGF--CLDRVC 405

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG-FSVKAREVYRMM 234
            ++L+  + KK+ +++     N+M   G+ PD    N +I      G F +  + + +M 
Sbjct: 406 YNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMT 465

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQ--GRGCSPNGVTYNVLITGFSRNG 292
            E G+ P++ TY  ++ ++C    + EA+++  EM        PN V YN+LI    +  
Sbjct: 466 EEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQT 525

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
           ++  A  L+ DM   G+  +  +YN I     +K  L +A  L + MV +   P   T  
Sbjct: 526 QVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDYITME 585

Query: 353 ILIYGLCKWGRVS 365
           IL   L   G ++
Sbjct: 586 ILTEWLSAVGEIT 598


>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
 gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
          Length = 603

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 164/562 (29%), Positives = 265/562 (47%), Gaps = 55/562 (9%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           AL F+ W  T+PG     F   ++L  L+  G L  A                       
Sbjct: 79  ALGFYHWAATRPGFSHTLFTRNSLLLALVRGGHLSDA----------------------- 115

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
                         L + + S+ E  +  FN +LR                 RD+   V 
Sbjct: 116 --------------LGFFQSSISEPNVSSFNILLRGF-------------AARDDFEVVN 148

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A  + R M   GI  +  T+  +L + C   ++ +A+     +    C P   TY VL+ 
Sbjct: 149 A--LLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVD 206

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G  +  ++E+A  +  +M++ G K    +Y+ +I G S+ G + EA  L + MV RG  P
Sbjct: 207 GLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPP 266

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
           T   Y  ++ GLCK GR+ +A     EM R+ + P + +Y+ ++ GY   G + +AF + 
Sbjct: 267 TAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVM 326

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
           +E+  R+  P  ++Y   I+ L   G  E A+++ E M+ +G  PD+ TY I+++  CK 
Sbjct: 327 EEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKE 386

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G+++ A      M +  ++P+R+ YT  + G +K     EA  L + +L  G  P  +TY
Sbjct: 387 GSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTY 446

Query: 527 NVLVHGLCKLGSLEEANELLRKMV--GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM 584
           N +++ LCKL  ++EA ELLR+M    +   P  +TY+ IIH   ++G   R  DL   M
Sbjct: 447 NTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEM 506

Query: 585 LRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRI 644
           +  G+ P   TYT LI   A  G++  A     EM   GI P+  TY  L+  LCR   +
Sbjct: 507 IDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCR-SDV 565

Query: 645 DQAYGLFIDMEEEGILPNKYTY 666
           D A+ L  +M   G  PN++T+
Sbjct: 566 DAAWDLLQEMMRNGHTPNEFTF 587



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 143/470 (30%), Positives = 245/470 (52%), Gaps = 5/470 (1%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G   ++ T N++L +  + G + +AL      Q     PN  ++N+L+ GF+   + E  
Sbjct: 91  GFSHTLFTRNSLLLALVRGGHLSDALGFF---QSSISEPNVSSFNILLRGFAARDDFEVV 147

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L+R+M   G+  +  ++  I+     +  L +A++    +      PTL TY +L+ G
Sbjct: 148 NALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDG 207

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           LCK  +V  A   F EM+RK   PDII+Y++L+ G  ++G + EA  L D + +R   PT
Sbjct: 208 LCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPT 267

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
            V Y +++ GLC+ G ++ A +  + M  + + P V TY+ +V G   MG +  A     
Sbjct: 268 AVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVME 327

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           EM  +   PD  +YT  I     +G   EA ++ E M+ KG  PD+ TY +++   CK G
Sbjct: 328 EMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEG 387

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
           S+  A  +LR M      P+   YT I+   ++   L    +L+  +L+ G+ P+ VTY 
Sbjct: 388 SMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYN 447

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKG--IRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
            +I+A     +++ A     EMQ +   + P+++TY+ +I+GL ++   ++A+ L  +M 
Sbjct: 448 TVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMI 507

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           + G++P+ +TYT LI     AG    A+ L +EML   I PD  T+  L+
Sbjct: 508 DNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLV 557



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 127/460 (27%), Positives = 224/460 (48%), Gaps = 5/460 (1%)

Query: 267 WEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEK 326
           W     G S    T N L+    R G L  A G  +  +    + +  S+N ++ G++ +
Sbjct: 85  WAATRPGFSHTLFTRNSLLLALVRGGHLSDALGFFQSSIS---EPNVSSFNILLRGFAAR 141

Query: 327 GLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISY 386
                   L  EM +RG+    AT+ +++  LC    +  A   F  +      P + +Y
Sbjct: 142 DDFEVVNALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTY 201

Query: 387 NTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMIN 446
             L+ G C++  +  A  +F+E+  +   P ++ Y++LIDGL + G ++ A++L + M+ 
Sbjct: 202 TVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVA 261

Query: 447 QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSE 506
           +G  P  + YT +V G CK G +  A +   EM R+ L+P    Y+  + G + +G   +
Sbjct: 262 RGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEK 321

Query: 507 AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
           A+ + EEM  +   PD I+Y + +  L  +G  EEA ++   MV  G  PD  TY  II 
Sbjct: 322 AFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIID 381

Query: 567 ASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRP 626
              + G +     +   M +  + P    YT+++       RLE A   +  +   GI P
Sbjct: 382 NFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILP 441

Query: 627 NVITYNALINGLCRLRRIDQAYGLFIDME--EEGILPNKYTYTILINENCNAGNWQEALR 684
           + +TYN +IN LC+L+++D+A  L  +M+  +E + P+  TY+++I+     G  + A  
Sbjct: 442 STVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFD 501

Query: 685 LYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           L  EM+D  + PD  T+++L+           A+E LE +
Sbjct: 502 LLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEM 541



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/282 (31%), Positives = 138/282 (48%), Gaps = 3/282 (1%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y     VE+   V  +M      PD  +    I+ L   G   +A +V+  M E G KP 
Sbjct: 313 YIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPD 372

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           + TY  ++D+FCKEG M  A  +L  M      PN   Y +++ GF ++  LE+A  L +
Sbjct: 373 MHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQ 432

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG--VAPTLATYNILIYGLCK 360
            +LK G+  S  +YN +I    +   + EAL L  EM  R   + P++ TY+++I+GL K
Sbjct: 433 RILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGK 492

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G    A     EM+   VIPD  +Y +L+     +G +  A  L +E+    + P   T
Sbjct: 493 VGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHT 552

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
           Y TL+  LCR  D++ A  L + M+  G  P+  T+  +  G
Sbjct: 553 YGTLVQILCR-SDVDAAWDLLQEMMRNGHTPNEFTFKAVEKG 593



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 1/104 (0%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K  M E+   +  +M+ NG++PD      +I+ L   G   +A E+   M + GI P   
Sbjct: 492 KVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDH 551

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
           TY T++   C+  ++  A +LL EM   G +PN  T+  +  GF
Sbjct: 552 TYGTLVQILCR-SDVDAAWDLLQEMMRNGHTPNEFTFKAVEKGF 594


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 149/520 (28%), Positives = 263/520 (50%), Gaps = 27/520 (5%)

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
           + I     +N   V A  ++  +      P  + +N +L S  K       L L  +M+ 
Sbjct: 45  SSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEF 104

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
            G +P       ++  F    +L            +G   +  ++  +I G   KG + +
Sbjct: 105 EGINP-------VLFHFQHPHQL------------MGYHPNTITFTTLIKGLCLKGQIHQ 145

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK---NVI-PDIISYN 387
           AL   + +V  G       Y  LI+GLCK G    A     ++LR+   N++ P+++ Y+
Sbjct: 146 ALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAA----LDLLRRVDGNLVQPNVVMYS 201

Query: 388 TLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
           T++ G C+  ++ +AF L+ E+ S+ + P VVTY+ LI G    G L+ A  L   MI +
Sbjct: 202 TIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILE 261

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
            I PDV T+ I+V+G CK G +   +  F  M+++G++P+   Y + + G   + + ++A
Sbjct: 262 NIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKA 321

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
             +   M  +G  PD+ +YN+L+ G CK+  ++EA  L ++M     IPD +TY S+I  
Sbjct: 322 KSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDG 381

Query: 568 SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
             ++G +     L + M  +G+ P ++TY+ ++ A     +++ A    ++++ +GIRPN
Sbjct: 382 LCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPN 441

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYK 687
           + TY  LI+GLC+  R++ A+ +F D+  +G      TYT++I+  CN G + EAL L  
Sbjct: 442 MYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLS 501

Query: 688 EMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLG 727
           +M D    PD  T+  ++    DKD    A +  E +T G
Sbjct: 502 KMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKLREMITRG 541



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 131/404 (32%), Positives = 225/404 (55%), Gaps = 1/404 (0%)

Query: 186 KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVT 245
           K  + Q LL  + ++  G   D      +I  L   G +  A ++ R +    ++P++V 
Sbjct: 140 KGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVM 199

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           Y+T++D  CK+  + +A +L  EM  +G SPN VTY+ LI+GF   G+L+ A  L   M+
Sbjct: 200 YSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMI 259

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
              +K   +++N ++ G+ + G + E   +   M+ +G+ P + TY  L+ G C    V+
Sbjct: 260 LENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVN 319

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
            A+   + M ++ V PDI SYN L+ G+C+   + EA  LF E+  ++++P VVTYN+LI
Sbjct: 320 KAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLI 379

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           DGLC+ G +  A +L + M ++G+ PD+ITY+ +++  CK   +  A     ++  +G++
Sbjct: 380 DGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIR 439

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           P+ + YT  I G  K G   +A+ + E++L KG+   + TY V++HG C  G  +EA  L
Sbjct: 440 PNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALAL 499

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           L KM  +  IPD +TY  II +  +  +  +   L   M+ +GL
Sbjct: 500 LSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKL-REMITRGL 542



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/334 (31%), Positives = 178/334 (53%), Gaps = 1/334 (0%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   V     ++++M+  G+ P+V   + +I      G    A +++  M    IKP + 
Sbjct: 209 KDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVY 268

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           T+N ++D FCK+G+M+E   +   M  +G  PN VTY  L+ G+    E+ +A+ ++  M
Sbjct: 269 TFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTM 328

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
            + G+     SYN +I G+ +   + EA+NL +EM  + + P + TYN LI GLCK G++
Sbjct: 329 SQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKI 388

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
           S A     EM  + V PDII+Y+++L   C++  + +A  L  +L+ + + P + TY  L
Sbjct: 389 SYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTIL 448

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           IDGLC+ G LE A  + E+++ +G    V TYT+M++G C  G    A    ++M     
Sbjct: 449 IDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSC 508

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
            PD   Y   I       +  +A +L+ EM+ +G
Sbjct: 509 IPDAVTYEIIIRSLFDKDENDKAEKLR-EMITRG 541



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 1/209 (0%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
            I+  ++L+  + K   V++ + +F +M    ++PDV   N +I  L   G    A ++ 
Sbjct: 336 DIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLV 395

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M + G+ P I+TY+++LD+ CK  ++ +A+ LL +++ +G  PN  TY +LI G  + 
Sbjct: 396 DEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKG 455

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G LE A  +  D+L  G  ++ ++Y  +I G+  KGL  EAL L  +M      P   TY
Sbjct: 456 GRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTY 515

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVI 380
            I+I  L      +D   +  EM+ + ++
Sbjct: 516 EIIIRSLFDKDE-NDKAEKLREMITRGLL 543



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 45/209 (21%), Positives = 78/209 (37%), Gaps = 57/209 (27%)

Query: 554 FIP------DHITYTSIIHASLEMGDLRRGRDLFNNMLRK-------------------- 587
           FIP      + I Y+SI        D+     LF+ +LR+                    
Sbjct: 31  FIPYSSSKINFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSK 90

Query: 588 -------------------------------GLSPTLVTYTVLIHAHAARGRLELAFMYF 616
                                          G  P  +T+T LI     +G++  A ++ 
Sbjct: 91  HYHTVLSLSQQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFH 150

Query: 617 SEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNA 676
             +   G + + + Y  LI+GLC++     A  L   ++   + PN   Y+ +I+  C  
Sbjct: 151 DNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKD 210

Query: 677 GNWQEALRLYKEMLDREIEPDYCTHSALL 705
            +  +A  LY EM+ + I P+  T+SAL+
Sbjct: 211 KHVNDAFDLYSEMVSKGISPNVVTYSALI 239


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 146/489 (29%), Positives = 245/489 (50%), Gaps = 35/489 (7%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           PD  + N +I  L  +G    A +V+  M + G+ P+ +TYNTM+D   K G+++    L
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
             +M   G  PN VTYNVL++G  R G +++ R L+ +M    +     +Y+ +  G + 
Sbjct: 74  RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
            G     L+L  E + +GV     T +IL+ GLCK G+V+ A      ++   ++P  + 
Sbjct: 134 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 193

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY-------------- 431
           YNTL+ GYC+  ++  AF +F++++SR++ P  +TYN LI+GLC+               
Sbjct: 194 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 253

Query: 432 ---------------------GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
                                G LE    +  +M  +GI  DVI++  +V   CK G + 
Sbjct: 254 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 313

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            A    ++M+ K + P+   Y + I   ++ GDT +A+ L E+M   G    ++TYN+L+
Sbjct: 314 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLL 373

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
            GLC+   ++EA EL+  +   G  PD ++Y +II A    GD  +  +L   M + G+ 
Sbjct: 374 KGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIR 433

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           PTL TY  L+ A A+ GR+      + +M  K + P+   Y  +++   R     +   L
Sbjct: 434 PTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASL 493

Query: 651 FIDMEEEGI 659
             +M E+GI
Sbjct: 494 KKEMSEKGI 502



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 148/467 (31%), Positives = 235/467 (50%), Gaps = 2/467 (0%)

Query: 232 RMMG--EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           R MG  E    P   +YN ++    + G+  +AL++  EM   G  PN +TYN +I G  
Sbjct: 3   RRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHV 62

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           + G+LE    L   ML  G K +  +YN ++ G    G + E   L +EM +  + P   
Sbjct: 63  KGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGF 122

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           TY+IL  GL + G        F E L+K V+    + + LL G C+ G + +A  + + L
Sbjct: 123 TYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEML 182

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
               LVPT V YNTLI+G C+  DL  A  + E M ++ I PD ITY  ++NG CK+  +
Sbjct: 183 VHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMV 242

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
           + A +   EM + G+ P    + T I      G   + + +  +M  KG   D+I++  +
Sbjct: 243 TKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSV 302

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           V   CK G + EA  +L  M+     P+   Y SII A +E GD  +   L   M   G+
Sbjct: 303 VKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGV 362

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
           S ++VTY +L+       +++ A      ++ +G+RP+V++YN +I+  C     D+A  
Sbjct: 363 SASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALE 422

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
           L  +M + GI P   TY  L++   +AG   +   LY++ML + +EP
Sbjct: 423 LLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEP 469



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 134/446 (30%), Positives = 233/446 (52%), Gaps = 1/446 (0%)

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           P+  +YNV+I G  R+G+   A  +  +M+ +G+  +  +YN +I G+ + G L     L
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
            ++M+  G  P + TYN+L+ GLC+ GR+ + R    EM   ++ PD  +Y+ L  G  R
Sbjct: 74  RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133

Query: 396 SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
           +G       LF E   + ++    T + L++GLC+ G +  A+Q+ E +++ G++P  + 
Sbjct: 134 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 193

Query: 456 YTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML 515
           Y  ++NG C++ +L  A   F +M  + ++PD   Y   I G  KL   ++A  L  EM 
Sbjct: 194 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 253

Query: 516 AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLR 575
             G  P + T+N L+      G LE+   +L  M   G   D I++ S++ A  + G + 
Sbjct: 254 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 313

Query: 576 RGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALI 635
               + ++M+ K ++P    Y  +I A+   G  E AF+   +M+  G+  +++TYN L+
Sbjct: 314 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLL 373

Query: 636 NGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIE 695
            GLCR  +ID+A  L   +  +G+ P+  +Y  +I+  CN G+  +AL L +EM    I 
Sbjct: 374 KGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIR 433

Query: 696 PDYCTHSALLLKQLDKDYKVHAVEYL 721
           P   T+   L+  L    +VH +E L
Sbjct: 434 PTLRTYHT-LVSALASAGRVHDMECL 458



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 191/365 (52%)

Query: 193 LLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDS 252
           L +F + L+ G++     C+ ++  L  +G   KA +V  M+   G+ P+ V YNT+++ 
Sbjct: 141 LSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLING 200

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
           +C+  +++ A  +  +M+ R   P+ +TYN LI G  +   + +A  L+ +M K G+  S
Sbjct: 201 YCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPS 260

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
             ++N +I  Y   G L +   +  +M  +G+   + ++  ++   CK G++ +A     
Sbjct: 261 VETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILD 320

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
           +M+ K+V P+   YN+++  Y  SG+  +AFLL +++++  +  ++VTYN L+ GLCR  
Sbjct: 321 DMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSS 380

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
            ++ A++L   + NQG+ PDV++Y  +++  C  G+   A E   EM + G++P    Y 
Sbjct: 381 QIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYH 440

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
           T ++     G   +   L ++ML K   P    Y ++V    +  +  +   L ++M   
Sbjct: 441 TLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEK 500

Query: 553 GFIPD 557
           G   D
Sbjct: 501 GIAFD 505



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 171/330 (51%), Gaps = 2/330 (0%)

Query: 158 ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
           +L++L+  GL    +  I + L+  Y +   +     +F +M    + PD    N +I  
Sbjct: 178 VLEMLVHTGLVP--TTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALING 235

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
           L       KA ++   M + G+ PS+ T+NT++D++   G++++   +L +MQ +G   +
Sbjct: 236 LCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSD 295

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
            +++  ++  F +NG++ +A  ++ DM+   +  +A  YN II  Y E G   +A  L E
Sbjct: 296 VISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVE 355

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
           +M   GV+ ++ TYN+L+ GLC+  ++ +A    + +  + + PD++SYNT++   C  G
Sbjct: 356 KMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKG 415

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
           +  +A  L  E+    + PT+ TY+TL+  L   G +   + L + M+++ + P    Y 
Sbjct: 416 DTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYG 475

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           IMV+   +  N S       EM  KG+  D
Sbjct: 476 IMVDAYVRCENDSKVASLKKEMSEKGIAFD 505



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 35/221 (15%)

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
           PPD  +YNV++ GL + G   +A ++  +MV  G +P+ ITY ++I   ++ GDL  G  
Sbjct: 13  PPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFR 72

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY-------- 631
           L + ML  G  P +VTY VL+      GR++   +   EM    + P+  TY        
Sbjct: 73  LRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLT 132

Query: 632 ---------------------------NALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
                                      + L+NGLC+  ++ +A  +   +   G++P   
Sbjct: 133 RTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTV 192

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            Y  LIN  C   + + A  ++++M  R I PD+ T++AL+
Sbjct: 193 IYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALI 233


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 152/487 (31%), Positives = 246/487 (50%), Gaps = 35/487 (7%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G +P++VT +T++   C EG++ +ALEL  +M   G   + + Y  LI    +     QA
Sbjct: 4   GYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKT---RQA 60

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
           R                                 A+ L   M++   +    TY ++I  
Sbjct: 61  R--------------------------------RAVELHRRMLSEICSGNFFTYGLVIDS 88

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           LCK G        F EM+   + P++I Y++L+ G CR G + EA  LFDE+ S+ +   
Sbjct: 89  LCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKAN 148

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           V+TYN+LI   CR+G  + A +    M+ +GILPDV+T+T +++   K G +  A + F 
Sbjct: 149 VITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFE 208

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            M+++G  P+   Y + + G         A RL E M+ +G   D+I+YN L++G C  G
Sbjct: 209 LMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSG 268

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
             EEA  L RKM  +   P   TYT ++ A  + G +R  ++LFNNM   G SP+L TYT
Sbjct: 269 KTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYT 328

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           VL+      G +E A   F  ++    +P++  Y+ LI G+ + RR + A  +F ++   
Sbjct: 329 VLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTV 388

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHA 717
           G++PN  TY I+IN  C  G   EA RL+ +M +   E D  + + ++   L ++    A
Sbjct: 389 GLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKA 448

Query: 718 VEYLESL 724
           +E+L+ +
Sbjct: 449 MEFLKRM 455



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 134/472 (28%), Positives = 243/472 (51%)

Query: 200 LRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEM 259
           +++G  P++   + ++K +   G  + A E++  M   G +  I+ Y  ++++  K  + 
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60

Query: 260 QEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI 319
           + A+EL   M    CS N  TY ++I    ++G   +   + R+M+ +G+  +   Y+ +
Sbjct: 61  RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSL 120

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           I G    G L EA+NL +EMV++G+   + TYN LI+  C++G   +A   F +M+ + +
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGI 180

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
           +PD++++ TL+    + G + EA+ +F+ +  +   P +VTYN+L++GLC +  ++ A +
Sbjct: 181 LPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVR 240

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           L E M+ +GI  DVI+Y  ++NG C  G    A   F +M  + L P    YT  +    
Sbjct: 241 LFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALY 300

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           + G    A  L   M   G  P L TY VL+ GLCK G +EEA ++ R +    + P   
Sbjct: 301 QNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIR 360

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
            Y+ +I    +        ++F+ +   GL P +VTY ++I+     G+L  A   F +M
Sbjct: 361 IYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQM 420

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
           +  G   + I++N +I G  +  ++ +A      M E+   PN     +L+N
Sbjct: 421 EESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLVN 472



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 122/395 (30%), Positives = 209/395 (52%)

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
           +I  L  +G ++K  +++R M   GI P+++ Y+++++  C+ G+++EA+ L  EM  +G
Sbjct: 85  VIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQG 144

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
              N +TYN LI    R G  ++A      M+  G+     ++  +I   S+KG + EA 
Sbjct: 145 IKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAY 204

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
            + E M+ +G AP + TYN L+ GLC   ++  A   F  M+ + +  D+ISYNTL+ GY
Sbjct: 205 KIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGY 264

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
           C SG   EA  LF +++   L P++ TY  L+  L + G +  A++L  NM   G  P +
Sbjct: 265 CTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSL 324

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
            TYT++++G CK G +  A + F  +     +P    Y+  I G  +      A  + +E
Sbjct: 325 DTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDE 384

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           +   G  P+++TYN++++GLCK G L EA  L  +M   G   D I++  II   L+   
Sbjct: 385 IPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQ 444

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           +++  +    M  K  SP      +L++ +AA  +
Sbjct: 445 VQKAMEFLKRMREKNFSPNDSVTLMLVNLYAADAQ 479



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 103/328 (31%), Positives = 171/328 (52%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F++M+  G+  +V   N +I      G   +A   +  M   GI P +VT+ T++D   
Sbjct: 136 LFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLS 195

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K+G++QEA ++   M  +G +PN VTYN L+ G   + +++ A  L   M++ G+K+   
Sbjct: 196 KKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVI 255

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           SYN +I GY   G   EA+ L  +M    + P++ TY IL+  L + GR+  A+  F  M
Sbjct: 256 SYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNM 315

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
                 P + +Y  LL G C++G I EA  +F  L+S    P++  Y+ LI G+ +    
Sbjct: 316 QICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRW 375

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           E A ++ + +   G++P+++TY IM+NG CK G L  A   F +M   G + D  ++   
Sbjct: 376 ESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFI 435

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPD 522
           I G L+     +A    + M  K F P+
Sbjct: 436 IRGFLQENQVQKAMEFLKRMREKNFSPN 463


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 129/418 (30%), Positives = 225/418 (53%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PS V +  +L S  K       L L  +M   G  P+  T N+LI  F     L  A  +
Sbjct: 110 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 169

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  +LKLG +    ++N +I G   +G + EAL+L ++ +  G  P + TY  L+ GLCK
Sbjct: 170 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 229

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G  S A      M++KN  P++I+YNT++   C+   + EAF LF E+ ++ + P + T
Sbjct: 230 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFT 289

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YN+LI  LC   + +    L   M+N  I+P+V+ ++ +V+  CK G +++A +  + M+
Sbjct: 290 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI 349

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           ++G++PD   YT  + G     +  EA ++ + M+ KG  P++ +YN+L++G C++  ++
Sbjct: 350 KRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMD 409

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           +A  LL +M   G I D +TY ++IH    +G L+    LF+ M+  G  P LVTY +L+
Sbjct: 410 KAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILL 469

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
                   L  A +    ++   +  +++ YN  I+G+CR   ++ A  LF ++  +G
Sbjct: 470 DYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSCQG 527



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 126/377 (33%), Positives = 197/377 (52%)

Query: 329 LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNT 388
           L +AL+    M+     P+   +  L+  + K    S       +M    + PD+ + N 
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152

Query: 389 LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
           L+  +C    +G AF +  +L      P   T+NTLI GLC  G +  A  L +  I +G
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
             PDV+TY  ++NG CK+GN S A      M++K  +P+  AY T I    K    +EA+
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
            L  EM+ KG  PD+ TYN L+H LC L   +    LL +MV    +P+ + +++++ A 
Sbjct: 273 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 332

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
            + G +    D+ + M+++G+ P +VTYT L+  H  R  ++ A   F  M  KG  PNV
Sbjct: 333 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 392

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
            +YN LING C+++R+D+A GL   M  +G++ +  TY  LI+  C+ G  Q A+ L+ E
Sbjct: 393 RSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 452

Query: 689 MLDREIEPDYCTHSALL 705
           M+     PD  T+  LL
Sbjct: 453 MVASGQIPDLVTYRILL 469



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 126/435 (28%), Positives = 214/435 (49%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           ++  L  FN+ML     P   +  +++  +           +   M  FGI P + T N 
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++SFC    +  A  +L ++   GC P+  T+N LI G    G++ +A  L    +  G
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            +    +Y  ++ G  + G    A+ L   MV +   P +  YN +I  LCK  +V++A 
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
           + F EM+ K + PDI +YN+L++  C          L +E+ +  ++P VV ++T++D L
Sbjct: 273 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 332

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G + +A  + + MI +G+ PDV+TYT +++G C    +  A + F+ M+ KG  P+ 
Sbjct: 333 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 392

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
            +Y   I G  ++    +A  L E+M  +G   D +TYN L+HGLC +G L+ A  L  +
Sbjct: 393 RSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 452

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           MV  G IPD +TY  ++    +   L     L   +    L   ++ Y + I      G 
Sbjct: 453 MVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGE 512

Query: 609 LELAFMYFSEMQVKG 623
           LE A   FS +  +G
Sbjct: 513 LEAARDLFSNLSCQG 527



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 120/404 (29%), Positives = 207/404 (51%)

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           L+ A      ML +    S   +  ++   ++       L+L  +M + G+ P + T NI
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           LI   C   R+  A     ++L+    PD  ++NTL+ G C  G IGEA  LFD+     
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
             P VVTY TL++GLC+ G+   A +L  +M+ +   P+VI Y  +++  CK   ++ A 
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
             F+EM+ KG+ PD F Y + I     L +      L  EM+     P+++ ++ +V  L
Sbjct: 273 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 332

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
           CK G +  A++++  M+  G  PD +TYT+++       ++     +F+ M+ KG  P +
Sbjct: 333 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 392

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
            +Y +LI+ +    R++ A     +M ++G+  + +TYN LI+GLC + R+  A  LF +
Sbjct: 393 RSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 452

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           M   G +P+  TY IL++  C   +  EA+ L K +    ++ D
Sbjct: 453 MVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDAD 496



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 127/391 (32%), Positives = 203/391 (51%), Gaps = 6/391 (1%)

Query: 203 GLLPDVKNCNRIIKV---LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEM 259
           G+ PDV   N +I     LR  G+   A  V   + + G +P   T+NT++   C EG++
Sbjct: 142 GIPPDVYTLNILINSFCHLRRLGY---AFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKI 198

Query: 260 QEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI 319
            EAL L  +  G G  P+ VTY  L+ G  + G    A  L+R M++   + +  +YN I
Sbjct: 199 GEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTI 258

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           I    +   + EA NL  EM+T+G++P + TYN LI+ LC             EM+   +
Sbjct: 259 IDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKI 318

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
           +P+++ ++T++   C+ G I  A  + D +  R + P VVTY  L+DG C   +++ A +
Sbjct: 319 MPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVK 378

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           + + M+++G +P+V +Y I++NG C++  +  A     +M  +GL  D   Y T I G  
Sbjct: 379 VFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLC 438

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
            +G    A  L  EM+A G  PDL+TY +L+  LCK   L EA  LL+ + G     D +
Sbjct: 439 HVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADIL 498

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
            Y   I      G+L   RDLF+N+  +G +
Sbjct: 499 VYNIAIDGMCRAGELEAARDLFSNLSCQGFA 529



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 185/364 (50%), Gaps = 8/364 (2%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMGEFGIKPSIVTYNTMLDSF 253
           V  K+L+ G  PD    N +I+ L   G   +A  ++ + +GE G +P +VTY T+++  
Sbjct: 169 VLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGE-GFQPDVVTYGTLMNGL 227

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           CK G    A+ LL  M  + C PN + YN +I    ++ ++ +A  L  +M+  G+    
Sbjct: 228 CKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDI 287

Query: 314 HSYNPII---CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
            +YN +I   C   E   +   LN   EMV   + P +  ++ ++  LCK G ++ A   
Sbjct: 288 FTYNSLIHALCNLCEWKHVTTLLN---EMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDV 344

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
              M+++ V PD+++Y  L+ G+C    + EA  +FD +  +  VP V +YN LI+G C+
Sbjct: 345 VDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQ 404

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
              ++ A  L E M  QG++ D +TY  +++G C +G L  A   F+EM+  G  PD   
Sbjct: 405 IQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVT 464

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           Y   +    K    +EA  L + +       D++ YN+ + G+C+ G LE A +L   + 
Sbjct: 465 YRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLS 524

Query: 551 GDGF 554
             GF
Sbjct: 525 CQGF 528



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 169/331 (51%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           + + L +F+K +  G  PDV     ++  L   G +  A  + R M +   +P+++ YNT
Sbjct: 198 IGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNT 257

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++DS CK+ ++ EA  L  EM  +G SP+  TYN LI       E +    L+ +M+   
Sbjct: 258 IIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSK 317

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           +  +   ++ ++    ++G++  A ++ + M+ RGV P + TY  L+ G C    + +A 
Sbjct: 318 IMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAV 377

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F  M+ K  +P++ SYN L+ GYC+   + +A  L +++  + L+   VTYNTLI GL
Sbjct: 378 KVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGL 437

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C  G L+ A  L   M+  G +PD++TY I+++  CK  +L+ A      +    L  D 
Sbjct: 438 CHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADI 497

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
             Y   I G  + G+   A  L   +  +GF
Sbjct: 498 LVYNIAIDGMCRAGELEAARDLFSNLSCQGF 528



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 168/333 (50%), Gaps = 10/333 (3%)

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           + +A   F+ +   +  P+ V +  L+  + +         L   M + GI PDV T  I
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           ++N  C +  L  A     ++L+ G QPD   + T I G    G   EA  L ++ + +G
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
           F PD++TY  L++GLCK+G+   A  LLR MV     P+ I Y +II +  +   +    
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           +LF+ M+ KG+SP + TY  LIHA       +      +EM    I PNV+ ++ +++ L
Sbjct: 273 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 332

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
           C+   I  A+ +   M + G+ P+  TYT L++ +C      EA++++  M+ +   P+ 
Sbjct: 333 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 392

Query: 699 CTHSALL-----LKQLDKDYKVHAVEYLESLTL 726
            +++ L+     ++++DK     A+  LE ++L
Sbjct: 393 RSYNILINGYCQIQRMDK-----AMGLLEQMSL 420



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 142/300 (47%), Gaps = 15/300 (5%)

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           +NTL D L  +            M++    P  + +T ++    KM + S       +M 
Sbjct: 90  FNTLDDALSSF----------NRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMD 139

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
             G+ PD +     I     L     A+ +  ++L  G  PD  T+N L+ GLC  G + 
Sbjct: 140 SFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIG 199

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA  L  K +G+GF PD +TY ++++   ++G+      L  +M++K   P ++ Y  +I
Sbjct: 200 EALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTII 259

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
            +     ++  AF  FSEM  KGI P++ TYN+LI+ LC L        L  +M    I+
Sbjct: 260 DSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIM 319

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL-----LLKQLDKDYKV 715
           PN   ++ +++  C  G    A  +   M+ R +EPD  T++AL     L  ++D+  KV
Sbjct: 320 PNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKV 379



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 27/203 (13%)

Query: 126 VFCTILEILIESGLLRSAYWVVETVV-----------CVNMHG------------ILDVL 162
           VF T+++ L + G++  A+ VV+ ++              M G            + D +
Sbjct: 324 VFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTM 383

Query: 163 IGGGLSSCV-SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDN 221
           +  G   CV +++  ++L+  Y +   +++ + +  +M   GL+ D    N +I  L   
Sbjct: 384 VHKG---CVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHV 440

Query: 222 GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY 281
           G    A  ++  M   G  P +VTY  +LD  CK   + EA+ LL  ++G     + + Y
Sbjct: 441 GRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVY 500

Query: 282 NVLITGFSRNGELEQARGLIRDM 304
           N+ I G  R GELE AR L  ++
Sbjct: 501 NIAIDGMCRAGELEAARDLFSNL 523


>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 347

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 128/344 (37%), Positives = 204/344 (59%)

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           ++  M   G  P I TYNT++   CK+G +  A EL+ EMQ +GC PN +TY +LI  F 
Sbjct: 1   MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           + G LE+AR ++ +M   GL ++A  YN +I    +   + +ALN+  +M ++G  P + 
Sbjct: 61  KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 120

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           T+N LI+GLCK  +  +A   + +ML + VI + I+YNTL++ + R G + EA  L +++
Sbjct: 121 TFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDM 180

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
             R      +TYN LI  LCR G++E    L E+M+++G+ P+ I+  I++NG C+ GN+
Sbjct: 181 LFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNI 240

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A EF  +M+ +GL PD   Y + I G  K G   EA  L +++  +G  PD ITYN L
Sbjct: 241 QHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTL 300

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           +   CK G  ++A+ LL + V  GFIP+ +T+  ++   ++ GD
Sbjct: 301 ISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 344



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 118/343 (34%), Positives = 189/343 (55%)

Query: 198 KMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG 257
            ML  G  PD+   N +I  L   G+ V ARE+   M   G +P+++TY  ++D FCKEG
Sbjct: 4   SMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEG 63

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
            ++EA  +L EM G+G + N V YN LI+   ++ +++ A  +  DM   G K    ++N
Sbjct: 64  RLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFN 123

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            +I G  +     EAL L ++M+  GV     TYN LI+   + G + +A     +ML +
Sbjct: 124 SLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFR 183

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
               D I+YN L+   CR+GNI +   LF+++ S+ L P  ++ N LI+GLCR G+++ A
Sbjct: 184 GCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHA 243

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
            +   +MI++G+ PD++TY  ++NG CK G    A   F+++  +G+ PD   Y T I+ 
Sbjct: 244 LEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISW 303

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
             K G   +A+ L    +  GF P+ +T+ +LV    K G  E
Sbjct: 304 HCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 346



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 114/346 (32%), Positives = 187/346 (54%)

Query: 335 LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
           + E M++ G  P + TYN LI GLCK G +  AR    EM  K   P++I+Y  L+  +C
Sbjct: 1   MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
           + G + EA  + DE+  + L    V YN LI  LC+   ++ A  +  +M ++G  PD+ 
Sbjct: 61  KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 120

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
           T+  ++ G CK+     A   + +ML +G+  +   Y T I   L+ G   EA +L  +M
Sbjct: 121 TFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDM 180

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
           L +G P D ITYN L+  LC+ G++E+   L   M+  G  P++I+   +I+     G++
Sbjct: 181 LFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNI 240

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
           +   +   +M+ +GL+P +VTY  LI+     GR + A   F ++QV+GI P+ ITYN L
Sbjct: 241 QHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTL 300

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
           I+  C+    D A+ L     + G +PN+ T+ IL++     G+ +
Sbjct: 301 ISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 346



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 114/343 (33%), Positives = 190/343 (55%), Gaps = 3/343 (0%)

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           ML     PDI +YNTL+ G C+ G +  A  L +E++ +   P V+TY  LID  C+ G 
Sbjct: 5   MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 64

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           LE A+ + + M  +G+  + + Y  +++  CK   +  A   F +M  KG +PD F + +
Sbjct: 65  LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 124

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            I G  K+    EA  L ++ML +G   + ITYN L+H   + G+++EA +L+  M+  G
Sbjct: 125 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 184

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
              D ITY  +I A    G++ +G  LF +M+ KGL+P  ++  +LI+     G ++ A 
Sbjct: 185 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 244

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
            +  +M  +G+ P+++TYN+LINGLC+  R  +A  LF  ++ EGI P+  TY  LI+ +
Sbjct: 245 EFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWH 304

Query: 674 CNAGNWQEALRLYKEMLDREIEPDYCTHSALL---LKQLDKDY 713
           C  G + +A  L    +D    P+  T   L+   +K+ D+++
Sbjct: 305 CKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQEF 347



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 184/345 (53%), Gaps = 2/345 (0%)

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           ML +G      +YN +I G  +KG LV A  L  EM  +G  P + TY ILI   CK GR
Sbjct: 5   MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 64

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           + +AR+   EM  K +  + + YN L+   C+   + +A  +F ++ S+   P + T+N+
Sbjct: 65  LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 124

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           LI GLC+    E A  L ++M+ +G++ + ITY  +++   + G +  A +  N+ML +G
Sbjct: 125 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 184

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
              D   Y   I    + G+  +   L E+M++KG  P+ I+ N+L++GLC+ G+++ A 
Sbjct: 185 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 244

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
           E LR M+  G  PD +TY S+I+   + G  +   +LF+ +  +G+ P  +TY  LI  H
Sbjct: 245 EFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWH 304

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
              G  + A +  S     G  PN +T+  L++    ++  DQ +
Sbjct: 305 CKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNF--IKEGDQEF 347



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 113/343 (32%), Positives = 177/343 (51%)

Query: 269 MQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
           M   GC P+  TYN LI G  + G L  AR L+ +M   G + +  +Y  +I  + ++G 
Sbjct: 5   MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 64

Query: 329 LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNT 388
           L EA N+ +EM  +G+A     YN LI  LCK  +V DA + F +M  K   PDI ++N+
Sbjct: 65  LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 124

Query: 389 LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
           L++G C+     EA  L+ ++    ++   +TYNTLI    R G ++ A +L  +M+ +G
Sbjct: 125 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 184

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
              D ITY  ++   C+ GN+      F +M+ KGL P+  +    I G  + G+   A 
Sbjct: 185 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 244

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
               +M+ +G  PD++TYN L++GLCK G  +EA  L  K+  +G  PD ITY ++I   
Sbjct: 245 EFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWH 304

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLEL 611
            + G       L +  +  G  P  VT+ +L+      G  E 
Sbjct: 305 CKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQEF 347



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 94/266 (35%), Positives = 140/266 (52%)

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           + E+M++ G  PD+ TY  ++ G CK G L  ARE  NEM  KG +P+   YT  I    
Sbjct: 1   MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           K G   EA  + +EM  KG   + + YN L+  LCK   +++A  +   M   G  PD  
Sbjct: 61  KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 120

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
           T+ S+I    ++        L+ +ML +G+    +TY  LIHA   RG ++ A    ++M
Sbjct: 121 TFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDM 180

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
             +G   + ITYN LI  LCR   I++   LF DM  +G+ PN  +  ILIN  C  GN 
Sbjct: 181 LFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNI 240

Query: 680 QEALRLYKEMLDREIEPDYCTHSALL 705
           Q AL   ++M+ R + PD  T+++L+
Sbjct: 241 QHALEFLRDMIHRGLTPDIVTYNSLI 266



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 154/286 (53%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K+  +E+   V ++M   GL  +    N +I  L  +     A  ++  M   G KP 
Sbjct: 59  FCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPD 118

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           I T+N+++   CK  + +EAL L  +M   G   N +TYN LI  F R G +++A  L+ 
Sbjct: 119 IFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVN 178

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           DML  G  +   +YN +I      G + + L L E+M+++G+ P   + NILI GLC+ G
Sbjct: 179 DMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTG 238

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            +  A     +M+ + + PDI++YN+L+ G C++G   EA  LFD+L+   + P  +TYN
Sbjct: 239 NIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYN 298

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
           TLI   C+ G  + A  L    ++ G +P+ +T+ I+V+   K G+
Sbjct: 299 TLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 344



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 54/107 (50%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           ++  L     M+  GL PD+   N +I  L   G + +A  ++  +   GI P  +TYNT
Sbjct: 240 IQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNT 299

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
           ++   CKEG   +A  LL      G  PN VT+ +L++ F + G+ E
Sbjct: 300 LISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 346


>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
 gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g31850,
            chloroplastic; AltName: Full=Protein PROTON GRADIENT
            REGULATION 3; Flags: Precursor
 gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
 gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
 gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
          Length = 1112

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 168/569 (29%), Positives = 285/569 (50%), Gaps = 41/569 (7%)

Query: 177  DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
            ++++  Y+K   +++ + + ++M+ NG  PDV   N +I  L       +A +++  M E
Sbjct: 507  NMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKE 566

Query: 237  FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
              +KP++VTYNT+L    K G++QEA+EL   M  +GC PN +T+N L     +N E+  
Sbjct: 567  MKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTL 626

Query: 297  ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
            A  ++  M+ +G      +YN II G  + G + EA+    +M  + V P   T   L+ 
Sbjct: 627  ALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLP 685

Query: 357  GLCKWGRVSDA---------------RHRFFE-----MLRKNVIPDIISYNTLLY--GYC 394
            G+ K   + DA                + F+E     +L +  I + +S++  L   G C
Sbjct: 686  GVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGIC 745

Query: 395  RSG---------------NIGEAFLLFDEL-RSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
            R G               N+  A  LF++  +   + P + TYN LI GL     +E+AQ
Sbjct: 746  RDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQ 805

Query: 439  QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
             +   + + G +PDV TY  +++   K G +    E + EM     + +   +   I+G 
Sbjct: 806  DVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGL 865

Query: 499  LKLGDTSEAYRLQEEMLA-KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
            +K G+  +A  L  ++++ + F P   TY  L+ GL K G L EA +L   M+  G  P+
Sbjct: 866  VKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPN 925

Query: 558  HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
               Y  +I+   + G+      LF  M+++G+ P L TY+VL+      GR++    YF 
Sbjct: 926  CAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFK 985

Query: 618  EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME-EEGILPNKYTYTILINENCNA 676
            E++  G+ P+V+ YN +INGL +  R+++A  LF +M+   GI P+ YTY  LI     A
Sbjct: 986  ELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIA 1045

Query: 677  GNWQEALRLYKEMLDREIEPDYCTHSALL 705
            G  +EA ++Y E+    +EP+  T +AL+
Sbjct: 1046 GMVEEAGKIYNEIQRAGLEPNVFTFNALI 1074



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 144/518 (27%), Positives = 248/518 (47%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +E+   VF+ M +  +  D      I K L   G   +A    R M EFG   +  +YN 
Sbjct: 134 LEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNG 193

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++    K     EA+E+   M   G  P+  TY+ L+ G  +  +++   GL+++M  LG
Sbjct: 194 LIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLG 253

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           LK + +++   I      G + EA  + + M   G  P + TY +LI  LC   ++  A+
Sbjct: 254 LKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAK 313

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F +M      PD ++Y TLL  +  + ++      + E+     VP VVT+  L+D L
Sbjct: 314 EVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDAL 373

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G+   A    + M +QGILP++ TY  ++ G  ++  L  A E F  M   G++P  
Sbjct: 374 CKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTA 433

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
           + Y   I    K GD+  A    E+M  KG  P+++  N  ++ L K G   EA ++   
Sbjct: 434 YTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYG 493

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           +   G +PD +TY  ++    ++G++     L + M+  G  P ++    LI+      R
Sbjct: 494 LKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADR 553

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           ++ A+  F  M+   ++P V+TYN L+ GL +  +I +A  LF  M ++G  PN  T+  
Sbjct: 554 VDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNT 613

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
           L +  C       AL++  +M+D    PD  T++ ++ 
Sbjct: 614 LFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIF 651



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 150/529 (28%), Positives = 249/529 (47%), Gaps = 45/529 (8%)

Query: 185  KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEFGIKPSI 243
            K   +++ + +F  M++ G  P+    N +   L +++  ++  + +++MM + G  P +
Sbjct: 585  KNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM-DMGCVPDV 643

Query: 244  VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
             TYNT++    K G+++EA+    +M+ +   P+ VT   L+ G  +   +E A  +I +
Sbjct: 644  FTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKASLIEDAYKIITN 702

Query: 304  MLKLGLKVSAHSYNPIICG--YSEKGLLVEALNLEEEMVTRG------------------ 343
             L       A+ +   + G   +E G+   A++  E +V  G                  
Sbjct: 703  FLYNCADQPANLFWEDLIGSILAEAGI-DNAVSFSERLVANGICRDGDSILVPIIRYSCK 761

Query: 344  -------------------VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDII 384
                               V P L TYN+LI GL +   +  A+  F ++     IPD+ 
Sbjct: 762  HNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVA 821

Query: 385  SYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN- 443
            +YN LL  Y +SG I E F L+ E+ +       +T+N +I GL + G+++ A  L  + 
Sbjct: 822  TYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDL 881

Query: 444  MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
            M ++   P   TY  +++G  K G L  A++ F  ML  G +P+   Y   I G  K G+
Sbjct: 882  MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGE 941

Query: 504  TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
               A  L + M+ +G  PDL TY+VLV  LC +G ++E     +++   G  PD + Y  
Sbjct: 942  ADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNL 1001

Query: 564  IIHASLEMGDLRRGRDLFNNM-LRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
            II+   +   L     LFN M   +G++P L TY  LI      G +E A   ++E+Q  
Sbjct: 1002 IINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRA 1061

Query: 623  GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
            G+ PNV T+NALI G     + + AY ++  M   G  PN  TY  L N
Sbjct: 1062 GLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 149/577 (25%), Positives = 258/577 (44%), Gaps = 27/577 (4%)

Query: 120 VKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLL 179
           +KRD   + TI + L   G L+ A + +  +       +L+     GL        + LL
Sbjct: 149 IKRDTNTYLTIFKSLSVKGGLKQAPYALRKMR--EFGFVLNAYSYNGL--------IHLL 198

Query: 180 LLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG---- 235
           L    K     + + V+ +M+  G  P ++  + ++  L       K R++  +MG    
Sbjct: 199 L----KSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLG------KRRDIDSVMGLLKE 248

Query: 236 --EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
               G+KP++ T+   +    + G++ EA E+L  M   GC P+ VTY VLI       +
Sbjct: 249 METLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARK 308

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           L+ A+ +   M     K    +Y  ++  +S+   L        EM   G  P + T+ I
Sbjct: 309 LDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTI 368

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           L+  LCK G   +A      M  + ++P++ +YNTL+ G  R   + +A  LF  + S  
Sbjct: 369 LVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLG 428

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           + PT  TY   ID   + GD   A +  E M  +GI P+++     +    K G    A+
Sbjct: 429 VKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAK 488

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
           + F  +   GL PD   Y   +    K+G+  EA +L  EM+  G  PD+I  N L++ L
Sbjct: 489 QIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTL 548

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
            K   ++EA ++  +M      P  +TY +++    + G ++   +LF  M++KG  P  
Sbjct: 549 YKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNT 608

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
           +T+  L         + LA     +M   G  P+V TYN +I GL +  ++ +A   F  
Sbjct: 609 ITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQ 668

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           M++  + P+  T   L+     A   ++A ++    L
Sbjct: 669 MKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNFL 704



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 122/270 (45%), Gaps = 36/270 (13%)

Query: 472 AREFFNEMLRKGLQPD-------------------RFAYTTQIAGELKLGDTS------- 505
           + +F   M+RK  +PD                    F+Y   +AG L L  T+       
Sbjct: 66  SSDFSGSMIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYML 125

Query: 506 EAYRLQEEMLAKGFPPDLI----------TYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
           EA R+  ++    +  DL+          TY  +   L   G L++A   LRKM   GF+
Sbjct: 126 EALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFV 185

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
            +  +Y  +IH  L+        +++  M+ +G  P+L TY+ L+     R  ++     
Sbjct: 186 LNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGL 245

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
             EM+  G++PNV T+   I  L R  +I++AY +   M++EG  P+  TYT+LI+  C 
Sbjct: 246 LKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCT 305

Query: 676 AGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           A     A  ++++M     +PD  T+  LL
Sbjct: 306 ARKLDCAKEVFEKMKTGRHKPDRVTYITLL 335



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 94/181 (51%), Gaps = 1/181 (0%)

Query: 175  ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
            I ++L+  + K    +    +F +M++ G+ PD+K  + ++  L   G   +    ++ +
Sbjct: 928  IYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKEL 987

Query: 235  GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQ-GRGCSPNGVTYNVLITGFSRNGE 293
             E G+ P +V YN +++   K   ++EAL L  EM+  RG +P+  TYN LI      G 
Sbjct: 988  KESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGM 1047

Query: 294  LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
            +E+A  +  ++ + GL+ +  ++N +I GYS  G    A  + + MVT G +P   TY  
Sbjct: 1048 VEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQ 1107

Query: 354  L 354
            L
Sbjct: 1108 L 1108



 Score = 41.2 bits (95), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 3/138 (2%)

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
           T  T   ++ A    G+LE     F  MQ + I+ +  TY  +   L     + QA    
Sbjct: 117 TTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYAL 176

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL---KQ 708
             M E G + N Y+Y  LI+    +    EA+ +Y+ M+     P   T+S+L++   K+
Sbjct: 177 RKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKR 236

Query: 709 LDKDYKVHAVEYLESLTL 726
            D D  +  ++ +E+L L
Sbjct: 237 RDIDSVMGLLKEMETLGL 254


>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
 gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
          Length = 595

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 143/469 (30%), Positives = 243/469 (51%), Gaps = 8/469 (1%)

Query: 244 VTYNTMLDSFCKEG--EMQEALELLWEMQGRG---CSPNGVTYNVLITGFSRNGELEQAR 298
           V+YNT+L + C+ G   +++A  LL +M         PN V+Y  ++ G   +    +A 
Sbjct: 84  VSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGEAV 143

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L+R M   G++    +Y  +I G  +   L  AL L +EM   GV P +  Y+ L+ G 
Sbjct: 144 ALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGY 203

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C+ GR  D    F +M R+ + PD+I +  L+   C+ G  G+A  + D +  R L P V
Sbjct: 204 CRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNV 263

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           VTYN LI+ LC+ G +  A  L++ M ++G+ PDV+TY  ++ G   +  +  A  F  E
Sbjct: 264 VTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEE 323

Query: 479 MLRKG--LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           M++    ++PD   + + I G  K+G  ++A +++E M  +G   +L+TYN L+ G  ++
Sbjct: 324 MIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRV 383

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
             ++ A  L+ ++   G  PD  TY+ +I+   +M ++ R       M ++G+   L  Y
Sbjct: 384 HKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHY 443

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
             L+ A   +G +E A   F+EM  K    + I Y+ +I+G C+   +     L  DM +
Sbjct: 444 IPLLAAMCQQGMMERAMGLFNEMD-KNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLD 502

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           EG+ P+  TY++LIN     G+ +EA R+ K+M      PD     +L+
Sbjct: 503 EGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLI 551



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 139/436 (31%), Positives = 234/436 (53%), Gaps = 3/436 (0%)

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           +A  + R M   G++  +VTY T++   C   E+  ALELL EM G G  PN V Y+ L+
Sbjct: 141 EAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLL 200

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            G+ R+G  +    +  DM + G+K     +  +I    ++G   +A  +++ MV RG+ 
Sbjct: 201 RGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLE 260

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P + TYN+LI  LCK G V +A     EM  K V PD+++YNTL+ G      + EA   
Sbjct: 261 PNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSF 320

Query: 406 FDELRSRNLV--PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
            +E+   + V  P VVT+N++I GLC+ G +  A +++E M  +G + +++TY  ++ G 
Sbjct: 321 LEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGF 380

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
            ++  + MA    +E+   GL+PD F Y+  I G  K+ +   A +    M  +G   +L
Sbjct: 381 LRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAEL 440

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
             Y  L+  +C+ G +E A  L  +M  +  + D I Y+++IH + + GD++  + L  +
Sbjct: 441 FHYIPLLAAMCQQGMMERAMGLFNEMDKNCGL-DAIAYSTMIHGACKSGDMKTVKQLIQD 499

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           ML +GL+P  VTY++LI+ +A  G LE A     +M   G  P+V  +++LI G     +
Sbjct: 500 MLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQ 559

Query: 644 IDQAYGLFIDMEEEGI 659
            D+   L  +M  + +
Sbjct: 560 TDKVLKLIHEMRAKNV 575



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 231/444 (52%), Gaps = 5/444 (1%)

Query: 191 QCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTML 250
           + + +   M  +G+  DV     +I+ L D      A E+   M   G++P++V Y+ +L
Sbjct: 141 EAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLL 200

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
             +C+ G  Q+  ++  +M  RG  P+ + +  LI    + G+  +A  +   M++ GL+
Sbjct: 201 RGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLE 260

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
            +  +YN +I    ++G + EAL L +EM  +GVAP + TYN LI GL     + +A   
Sbjct: 261 PNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSF 320

Query: 371 FFEMLRKNVI--PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             EM++ + +  PD++++N++++G C+ G + +A  + + +  R  +  +VTYN LI G 
Sbjct: 321 LEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGF 380

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
            R   +++A  L + +   G+ PD  TY+I++NG  KM  +  A +F   M ++G++ + 
Sbjct: 381 LRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAEL 440

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
           F Y   +A   + G    A  L  EM  K    D I Y+ ++HG CK G ++   +L++ 
Sbjct: 441 FHYIPLLAAMCQQGMMERAMGLFNEM-DKNCGLDAIAYSTMIHGACKSGDMKTVKQLIQD 499

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M+ +G  PD +TY+ +I+   ++GDL     +   M   G  P +  +  LI  ++A G+
Sbjct: 500 MLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQ 559

Query: 609 LELAFMYFSEMQVKGIR--PNVIT 630
            +       EM+ K +   P +I+
Sbjct: 560 TDKVLKLIHEMRAKNVAFDPKIIS 583



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 142/504 (28%), Positives = 241/504 (47%), Gaps = 13/504 (2%)

Query: 205 LPDVKNC---NRIIKVL--RDNGFSVKAREVYRMM---GEFGIKPSIVTYNTMLDSFCKE 256
           LPDV++    N ++  L  R      +AR +   M        +P+ V+Y T++   C  
Sbjct: 77  LPDVRDAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCAS 136

Query: 257 GEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSY 316
               EA+ LL  MQ  G   + VTY  LI G     EL+ A  L+ +M   G++ +   Y
Sbjct: 137 RRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVY 196

Query: 317 NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
           + ++ GY   G   +   + E+M  RG+ P +  +  LI  LCK G+   A      M++
Sbjct: 197 SCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQ 256

Query: 377 KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
           + + P++++YN L+   C+ G++ EA  L  E+  + + P VVTYNTLI GL    +++ 
Sbjct: 257 RGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDE 316

Query: 437 AQQLKENMINQG---ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           A    E MI QG   + PDV+T+  +++G CK+G ++ A +    M  +G   +   Y  
Sbjct: 317 AMSFLEEMI-QGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNY 375

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            I G L++     A  L +E+   G  PD  TY++L++G  K+  ++ A + L  M   G
Sbjct: 376 LIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRG 435

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
              +   Y  ++ A  + G + R   LFN M  K      + Y+ +IH     G ++   
Sbjct: 436 IKAELFHYIPLLAAMCQQGMMERAMGLFNEM-DKNCGLDAIAYSTMIHGACKSGDMKTVK 494

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
               +M  +G+ P+ +TY+ LIN   +L  +++A  +   M   G +P+   +  LI   
Sbjct: 495 QLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGY 554

Query: 674 CNAGNWQEALRLYKEMLDREIEPD 697
              G   + L+L  EM  + +  D
Sbjct: 555 SAEGQTDKVLKLIHEMRAKNVAFD 578



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 137/463 (29%), Positives = 231/463 (49%), Gaps = 20/463 (4%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           A+   R ++   GV+ D   + T++  L ++  L +A              +LD + G G
Sbjct: 142 AVALLRSMQAS-GVRADVVTYGTLIRGLCDASELDAALE------------LLDEMCGSG 188

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
           +    ++ +   LL  Y +    +    VF  M R G+ PDV     +I  L   G + K
Sbjct: 189 VQP--NVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGK 246

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A +V  MM + G++P++VTYN +++S CKEG ++EAL L  EM  +G +P+ VTYN LI 
Sbjct: 247 AAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIA 306

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAH--SYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           G S   E+++A   + +M++    V     ++N +I G  + G + +A+ + E M  RG 
Sbjct: 307 GLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGC 366

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
              L TYN LI G  +  +V  A +   E+    + PD  +Y+ L+ G+ +   +  A  
Sbjct: 367 MCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEK 426

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM-INQGILPDVITYTIMVNGS 463
               +R R +   +  Y  L+  +C+ G +E A  L   M  N G+  D I Y+ M++G+
Sbjct: 427 FLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKNCGL--DAIAYSTMIHGA 484

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
           CK G++   ++   +ML +GL PD   Y+  I    KLGD  EA R+ ++M A GF PD+
Sbjct: 485 CKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDV 544

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
             ++ L+ G    G  ++  +L+ +M       D    ++II 
Sbjct: 545 AVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIISTIIR 587



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 165/339 (48%), Gaps = 45/339 (13%)

Query: 378 NVIPDI---ISYNTLLYGYCRSGN------------------------------------ 398
           + +PD+   +SYNT+L   CR G                                     
Sbjct: 75  SALPDVRDAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLC 134

Query: 399 ----IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
                GEA  L   +++  +   VVTY TLI GLC   +L+ A +L + M   G+ P+V+
Sbjct: 135 ASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVV 194

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
            Y+ ++ G C+ G      + F +M R+G++PD   +T  I    K G T +A ++++ M
Sbjct: 195 VYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMM 254

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
           + +G  P+++TYNVL++ LCK GS+ EA  L ++M   G  PD +TY ++I     + ++
Sbjct: 255 VQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEM 314

Query: 575 RRGRDLFNNMLRKG--LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
                    M++    + P +VT+  +IH     GR+  A      M  +G   N++TYN
Sbjct: 315 DEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYN 374

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
            LI G  R+ ++  A  L  ++   G+ P+ +TY+ILIN
Sbjct: 375 YLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILIN 413



 Score = 42.7 bits (99), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 5/103 (4%)

Query: 627 NVITYNALINGLCRL--RRIDQAYGLFIDMEEEG---ILPNKYTYTILINENCNAGNWQE 681
           + ++YN ++  LCR     + QA  L +DM  E      PN  +YT ++   C +    E
Sbjct: 82  DAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGE 141

Query: 682 ALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           A+ L + M    +  D  T+  L+    D      A+E L+ +
Sbjct: 142 AVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEM 184


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 180/703 (25%), Positives = 292/703 (41%), Gaps = 104/703 (14%)

Query: 92  LLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVV 151
           ++V VL  +R  P + +RFF W E Q G       +  + E+L      R+   ++  + 
Sbjct: 106 VVVAVLRSVR-TPELCVRFFLWAERQVGYSHTGACYNALAEVLHFDDRARTTERLLREI- 163

Query: 152 CVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNC 211
                G  D  + G        ++L++++    +     + L    ++   G  P     
Sbjct: 164 -----GEDDREVLG--------RLLNVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATY 210

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE------------- 258
           N +++VL   G       V + M E G      T      + CKEG              
Sbjct: 211 NALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEGRWSDALVMIEREDF 270

Query: 259 -------------------MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
                                EA+  L  M+   C PN VTY  L+ GF +  +L   + 
Sbjct: 271 KLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKR 330

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG-- 357
           +I  M+  G   +   +N ++  Y        A  L   M   G  P    YNI I    
Sbjct: 331 IISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSIC 390

Query: 358 ---------------------------------------LCKWGRVSDARHRFFEMLRKN 378
                                                  LC  G+   A      M+RK 
Sbjct: 391 SGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKG 450

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
            +PD  +Y+ ++   C +  + +AFLLF E++S  ++P V TY  LID  C+ G +E A+
Sbjct: 451 FVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQAR 510

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
              + M + G  P V+TYT +++   K   +  A + F+ M+  G  P+   Y+  + G 
Sbjct: 511 SWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGL 570

Query: 499 LKLGDTSEAYRLQEEMLA----------------KGFPPDLITYNVLVHGLCKLGSLEEA 542
            K G++ +A  +  +M+                     P+++TY  L+ GLCK   + +A
Sbjct: 571 CKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDA 630

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            ELL  M  +G  P+HI Y ++I    ++G L   +++F  M + G  PT+ TYT LI A
Sbjct: 631 QELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDA 690

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
                RL+LA    S+M      PNV+TY A+I+GLCR+    +A  L   ME+ G  PN
Sbjct: 691 MFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPN 750

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             TYT LI+    +G    +L+L+ +M+ +   P+Y T+  L+
Sbjct: 751 VVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLI 793



 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 146/525 (27%), Positives = 256/525 (48%), Gaps = 23/525 (4%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           ++   +   M+R G +PD    +++I  L +     KA  +++ M   G+ P + TY  +
Sbjct: 437 DKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTIL 496

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           +DSFCK G +++A     EM+  GCSP+ VTY  L+  + +  ++ QA  +   M+  G 
Sbjct: 497 IDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGC 556

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMV----------------TRGVAPTLATYNI 353
             +  +Y+ ++ G  + G   +A  +  +M+                T  +AP + TY  
Sbjct: 557 APNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGA 616

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           LI GLCK  +V DA+     M      P+ I Y+ L+ G+C+ G +  A  +F  +    
Sbjct: 617 LIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCG 676

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
            +PTV TY +LID + +   L++A ++   M+     P+V+TYT M++G C++G    A 
Sbjct: 677 YLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKAL 736

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
           +  + M ++G  P+   YT+ I G  K G    + +L  +M+ +G  P+ +TY VL++  
Sbjct: 737 KLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHC 796

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHIT-YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           C  G L+EA+ LL +M    + P ++  Y S++    +      G  L   +   G+   
Sbjct: 797 CAAGLLDEAHSLLSEM-KQTYWPKYVQGYCSVVQGFSKKFIASLG--LLEELESHGMVSI 853

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI---TYNALINGLCRLRRIDQAYG 649
              Y +LI + +  GRLE A     EM       N+    TY +LI  LC   ++++A+ 
Sbjct: 854 APVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFE 913

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           L+ ++  +G++P    +  LI        W EAL+L   M D  +
Sbjct: 914 LYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSMCDEGV 958



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 167/604 (27%), Positives = 267/604 (44%), Gaps = 74/604 (12%)

Query: 112 RWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCV 171
           RW +    ++R++F   T+L   + SGL+ +                             
Sbjct: 257 RWSDALVMIEREDFKLDTVLCTQMISGLMEA----------------------------- 287

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK-VLRDNGFSVKAREV 230
                          S+ ++ +   ++M  N  +P+V     ++   L+        R +
Sbjct: 288 ---------------SLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRII 332

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
             MM E G  P+   +N+++ S+C   +   A +LL  M G GC P  V YN+ I     
Sbjct: 333 SMMMNE-GCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICS 391

Query: 291 NGELEQ------ARGLIRDMLKLGL---KVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
             EL        A  +  +ML       KV+  ++   +CG    G   +A  + + M+ 
Sbjct: 392 GEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGM---GKFDKAFQIIKLMMR 448

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
           +G  P  +TY+ +I  LC+  +V  A   F EM    VIPD+ +Y  L+  +C+ G I +
Sbjct: 449 KGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQ 508

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           A   FDE+ S    P+VVTY  L+    +   +  A  +   M++ G  P+ ITY+ +V+
Sbjct: 509 ARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVD 568

Query: 462 GSCKMGNLSMAREFFNEML----------------RKGLQPDRFAYTTQIAGELKLGDTS 505
           G CK G    A E + +M+                   + P+   Y   I G  K     
Sbjct: 569 GLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVV 628

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           +A  L + M + G  P+ I Y+ L+ G CK+G L+ A E+  +M   G++P   TYTS+I
Sbjct: 629 DAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLI 688

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
            A  +   L     + + ML    +P +VTYT +I      G  + A    S M+ +G  
Sbjct: 689 DAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCN 748

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           PNV+TY +LI+GL +  ++D +  LF  M  +G  PN  TY +LIN  C AG   EA  L
Sbjct: 749 PNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSL 808

Query: 686 YKEM 689
             EM
Sbjct: 809 LSEM 812



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 148/497 (29%), Positives = 245/497 (49%), Gaps = 21/497 (4%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V+ +ML +  + +  N     + L   G   KA ++ ++M   G  P   TY+ ++   C
Sbjct: 407 VYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLC 466

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           +  ++++A  L  EM+  G  P+  TY +LI  F + G +EQAR    +M  +G   S  
Sbjct: 467 EAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVV 526

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +Y  ++  Y +   + +A ++   MV  G AP   TY+ L+ GLCK G    A   + +M
Sbjct: 527 TYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKM 586

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           +                    S N+G  F  F+   + ++ P VVTY  LIDGLC+   +
Sbjct: 587 IGT------------------SDNVGSDF-YFEGEHTDSIAPNVVTYGALIDGLCKAHKV 627

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
             AQ+L + M + G  P+ I Y  +++G CK+G L  A+E F  M + G  P    YT+ 
Sbjct: 628 VDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSL 687

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I    K      A ++  +ML     P+++TY  ++ GLC++G  ++A +LL  M   G 
Sbjct: 688 IDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGC 747

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            P+ +TYTS+I    + G +     LF  M+ +G +P  VTY VLI+   A G L+ A  
Sbjct: 748 NPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHS 807

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
             SEM+       V  Y +++ G    ++   + GL  ++E  G++     Y +LI+   
Sbjct: 808 LLSEMKQTYWPKYVQGYCSVVQGFS--KKFIASLGLLEELESHGMVSIAPVYGLLIDSFS 865

Query: 675 NAGNWQEALRLYKEMLD 691
            AG  ++AL L+KEM++
Sbjct: 866 KAGRLEKALELHKEMME 882



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 135/531 (25%), Positives = 229/531 (43%), Gaps = 44/531 (8%)

Query: 84  QAVVSDPELLVRVLNRIREKPRIALRFFRWVETQP-GVKRDEFVFCTILEILIESGLL-- 140
           +  V D     +V+  + E  ++   F  + E +  GV  D + +  +++   + GL+  
Sbjct: 449 KGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQ 508

Query: 141 -RSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKM 199
            RS +  +E+V C                   S+     LL  Y K   V Q   +F++M
Sbjct: 509 ARSWFDEMESVGCSP-----------------SVVTYTALLHAYLKTKQVPQASDIFHRM 551

Query: 200 LRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM--------------GEF--GIKPSI 243
           +  G  P+    + ++  L   G S KA EVY  M              GE    I P++
Sbjct: 552 VDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNV 611

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           VTY  ++D  CK  ++ +A ELL  M   GC PN + Y+ LI GF + G+L+ A+ +   
Sbjct: 612 VTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFR 671

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M K G   + H+Y  +I    +   L  A+ +  +M+     P + TY  +I GLC+ G 
Sbjct: 672 MSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGE 731

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
              A      M ++   P++++Y +L+ G  +SG +  +  LF ++ ++   P  VTY  
Sbjct: 732 CQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRV 791

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVIT-YTIMVNGSCKMGNLSMAREFFNEMLRK 482
           LI+  C  G L+ A  L   M  Q   P  +  Y  +V G  K    S+      E+   
Sbjct: 792 LINHCCAAGLLDEAHSLLSEM-KQTYWPKYVQGYCSVVQGFSKKFIASLG--LLEELESH 848

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI---TYNVLVHGLCKLGSL 539
           G+      Y   I    K G   +A  L +EM+      ++    TY  L+  LC    L
Sbjct: 849 GMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQL 908

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
           E+A EL  ++   G +P+   +  +I   +++        L  +M  +G++
Sbjct: 909 EKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSMCDEGVN 959


>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
 gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 175/635 (27%), Positives = 295/635 (46%), Gaps = 33/635 (5%)

Query: 95  RVLNRIREKPRI--ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVC 152
            VLN+++ +P I  AL FF+ +      K     + T+++ L   G  R    +   +  
Sbjct: 42  EVLNKLKNEPNILLALHFFKSIANSNSFKHTPLTYTTMIKRL---GYERDIDGIQYLLQL 98

Query: 153 VNMHGILDVLIGGGLSSCVSIKILDLLLLI---YTKKSMVEQCLLVFNKMLRNGLLPDVK 209
           + + GI          SC      DL +++   Y +  + EQ L  F ++   G  P VK
Sbjct: 99  MKLEGI----------SCNE----DLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVK 144

Query: 210 NCNRII-KVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWE 268
             N ++  +L +N F +    +Y  M   GI+ ++ TYN +L + CK   +  A +LL E
Sbjct: 145 IYNHVLDALLSENKFQM-INGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAE 203

Query: 269 MQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
           M  +GC P+ V+Y  +++   R G++E+AR      L + +K     YN +I G+  +  
Sbjct: 204 MSYKGCIPDAVSYTTVVSSMCRLGKVEEARE-----LSMRIKSFVPVYNALINGFCREHK 258

Query: 329 LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNT 388
           + E   L  EM   G+ P + TY+ +I  L + G V  A     +M  +   P++ ++ +
Sbjct: 259 MEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTS 318

Query: 389 LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
           L+ GY   G + EA  L++ +      P  V YNTLI GLC YG +  A  + + M   G
Sbjct: 319 LMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNG 378

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
           + P+  TY+ +++G  K G+L  A E +N+M+  G  P+   YT  +    +    + A 
Sbjct: 379 VFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHAL 438

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
            L E M     PP+ IT+N  + GLC  G  E A ++L +M   G  P+  TY  ++   
Sbjct: 439 HLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGL 498

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
                 R    +   +    +   LVTY  ++      G  + A     ++ V G +P+ 
Sbjct: 499 FNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDS 558

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGI-LPNKYTYTILINENCNAGNWQEALRLYK 687
           ITYN +I   C+   +  A  L   + ++G   P+ +TYT L+   CN     EA+    
Sbjct: 559 ITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLD 618

Query: 688 EMLDREIEPDYCTHSAL---LLKQLDKDYKVHAVE 719
           +M++  I P+  T +AL   L  +L     +H V+
Sbjct: 619 KMINEGICPNRATWNALVRGLFSKLGHLGPIHIVD 653



 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 142/516 (27%), Positives = 245/516 (47%), Gaps = 40/516 (7%)

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
           +I   R  G + +A + +  +GEFG KPS+  YN +LD+   E + Q    +   M+  G
Sbjct: 114 VINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDG 173

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
              N  TYN+L+    +N  ++ AR L+                                
Sbjct: 174 IELNVYTYNMLLKALCKNDRVDAARKLL-------------------------------- 201

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
               EM  +G  P   +Y  ++  +C+ G+V +AR     M  K+ +P    YN L+ G+
Sbjct: 202 ---AEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARE--LSMRIKSFVP---VYNALINGF 253

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
           CR   + E F LF+E+    + P V+TY+T+I+ L   G++E+A  +   M  +G  P+V
Sbjct: 254 CREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNV 313

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
            T+T ++ G    G L  A + +N M+++G +P+  AY T I G    G   EA  + ++
Sbjct: 314 HTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQK 373

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           M   G  P+  TY+ L+ G  K G L  A+E+  KM+ +G +P+ + YT ++        
Sbjct: 374 MERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSM 433

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
                 L  NM      P  +T+   I      G+ E A    ++M+  G  PNV TYN 
Sbjct: 434 FNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNE 493

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
           +++GL   +R  +A  +  ++EE  I  N  TY  +++  C+AG ++ AL++  ++L   
Sbjct: 494 VLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGG 553

Query: 694 IEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLGAE 729
            +PD  T++ ++     +     A++ ++ LT   E
Sbjct: 554 TKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGE 589


>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
 gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
          Length = 481

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 152/402 (37%), Positives = 215/402 (53%), Gaps = 31/402 (7%)

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
           LSS  S     L   IY  +  +  C   FN MLR+               L   G  V+
Sbjct: 92  LSSLPSAPAFALFADIYRLR--LPLCTTTFNIMLRH---------------LCATGKPVR 134

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG-CSPNGVTYNVLI 285
           A E+ R M     +P+ VTYNT++  FC  G +Q ALE++ EM+ RG  +P+  TY  LI
Sbjct: 135 ALELLRQMP----RPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLI 190

Query: 286 TGFSRNGELEQARGLIRDMLKLG-LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           +G+ + G +E A  +  +ML  G +  SA  YN +I GY ++G L  AL   E+MV RGV
Sbjct: 191 SGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGV 250

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
           A T+ATYN+L++ L   GR SDA     EM R  + PD+ +YN L+ GYC+ GN  +A  
Sbjct: 251 AMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALE 310

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
           +F+E+  + +  T VTY +LI    R G ++   +L +  + +GI PDV+ Y  ++N  C
Sbjct: 311 VFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHC 370

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
             G++  A E   EM +K + PD   Y T I G   LG   EA  L +EM  +G  PDL 
Sbjct: 371 AGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPDL- 429

Query: 525 TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
                  GLCK G  ++A  L+++MVG G  PD  TY S+I 
Sbjct: 430 -------GLCKNGQGDDAENLMKEMVGKGITPDDSTYISLIE 464



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 125/372 (33%), Positives = 201/372 (54%), Gaps = 14/372 (3%)

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           T+NI++  LC  G+      R  E+LR+   P+ ++YNT++ G+C  G +  A  +  E+
Sbjct: 118 TFNIMLRHLCATGKPV----RALELLRQMPRPNAVTYNTVIAGFCARGRVQAALEVMREM 173

Query: 410 RSRN-LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG-ILPDVITYTIMVNGSCKMG 467
           R R  + P   TY TLI G C+ G +E A ++ + M+ QG + P  + Y  ++ G C  G
Sbjct: 174 RERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRG 233

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
            L +A ++  +M+++G+      Y   +      G  S+AY + EEM   G  PD+ TYN
Sbjct: 234 KLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYN 293

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
           +L++G CK G+ ++A E+  +M   G     +TYTS+I+A    G ++    LF   ++K
Sbjct: 294 ILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKK 353

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
           G+ P +V Y  LI++H A G +E AF   +EM+ K I P+ +TYN LI G C L R+D+A
Sbjct: 354 GIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEA 413

Query: 648 YGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLK 707
            GL  +M + GI P+           C  G   +A  L KEM+ + I PD  T+ +L+  
Sbjct: 414 RGLIDEMTKRGIQPDLGL--------CKNGQGDDAENLMKEMVGKGITPDDSTYISLIEG 465

Query: 708 QLDKDYKVHAVE 719
               D ++ A +
Sbjct: 466 LTTVDEQMSAAD 477



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 88/281 (31%), Positives = 144/281 (51%), Gaps = 9/281 (3%)

Query: 183 YTKKSMVEQCLLVFNKMLRNG-LLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKP 241
           + K   +E    VF++ML  G + P     N +I    D G    A +    M + G+  
Sbjct: 193 WCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAM 252

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
           ++ TYN ++ +   +G   +A  +L EMQ  G SP+  TYN+LI G+ + G  ++A  + 
Sbjct: 253 TVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVF 312

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
            +M + G++ +A +Y  +I  +S KG + E   L +  V +G+ P +  YN LI   C  
Sbjct: 313 EEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAG 372

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           G +  A     EM +K + PD ++YNTL+ G+C  G + EA  L DE+  R + P +   
Sbjct: 373 GDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPDL--- 429

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
                GLC+ G  + A+ L + M+ +GI PD  TY  ++ G
Sbjct: 430 -----GLCKNGQGDDAENLMKEMVGKGITPDDSTYISLIEG 465



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 27/138 (19%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  +++K  V++   +F   ++ G+ PDV   N +I      G   +A E+   M +  
Sbjct: 330 LIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKR 389

Query: 239 IKPSIVTYNTMLDSFC---------------------------KEGEMQEALELLWEMQG 271
           I P  VTYNT++  FC                           K G+  +A  L+ EM G
Sbjct: 390 IPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPDLGLCKNGQGDDAENLMKEMVG 449

Query: 272 RGCSPNGVTYNVLITGFS 289
           +G +P+  TY  LI G +
Sbjct: 450 KGITPDDSTYISLIEGLT 467


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 154/537 (28%), Positives = 275/537 (51%), Gaps = 33/537 (6%)

Query: 52  PESESYYKELIISTVEEKPWAFCNNRWVSDHFQAVV--SDPELLVRVLNRIREKPRIALR 109
           P S ++    I   + ++ W+           + +V  ++P  L++ L     +P + L 
Sbjct: 42  PNSHTFDTPTISQLIAKQHWS---------KLKTIVKETNPSSLLQHLFNSEAQPDLILC 92

Query: 110 FFRWVETQPGVKRDEFVFCTILEILIES-----------GLLRSAYWVVETVVCVNMHGI 158
           +F+W + + G   +   FC +L +L  +              ++A++   T+     H  
Sbjct: 93  YFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTI----FHS- 147

Query: 159 LDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL 218
           L VL   G   C +  I+D+L+  Y K   ++  L  F++    G      +CN ++  L
Sbjct: 148 LSVL---GSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSL 204

Query: 219 RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNG 278
              G       VY+ M    I  ++VT++ +++  CK G+ Q+A +++ +M+  G SP+ 
Sbjct: 205 VKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSV 264

Query: 279 VTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
           +TYN +I G+ + G++ +A  L+++M+   +  +  ++N +I G+     +  A  + EE
Sbjct: 265 ITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEE 324

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
           M  +G+ P + TYN LI GLC  G++ +A     +M    + P++++YN L+ G+C+   
Sbjct: 325 MQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKM 384

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           + EA  + D++  R L P V+T+NTLID   + G ++ A  L+  M++ G+ P+V TY  
Sbjct: 385 LKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNC 444

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML--- 515
           ++ G C+ GN+  AR+   EM   GL+ D   Y   +    K G+T +A RL +EM    
Sbjct: 445 LIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLME 504

Query: 516 AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
            KG   +++TYNVL+ G C  G LEEAN LL +M+  G IP+  TY  +    +E G
Sbjct: 505 KKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKG 561



 Score =  239 bits (609), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 141/441 (31%), Positives = 242/441 (54%), Gaps = 13/441 (2%)

Query: 204 LLPDVKNCNRIIKVLRDNGFSVKAR-------EVYRMMGEFGIKPSIVTYNTMLDSFCKE 256
           LL + KN N+I  +L  + F+  A            ++G +G   SI+  + ++ ++ K 
Sbjct: 116 LLANAKNYNKIRALL--DSFAKNAHYSNSTIFHSLSVLGSWGCANSIIV-DMLVWAYVKN 172

Query: 257 GEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSY 316
           GEM  ALE        G   + ++ N ++    + G +     + ++M++  + V+  ++
Sbjct: 173 GEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTF 232

Query: 317 NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
           + +I G  + G   +A ++ E+M   G +P++ TYN +I G CK G++  A     EM+ 
Sbjct: 233 DVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVA 292

Query: 377 KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
           K + P+ I++N L+ G+CR  N+  A  +F+E++ + L P VVTYN+LI+GLC  G L+ 
Sbjct: 293 KRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDE 352

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
           A  L++ M   G+ P+V+TY  ++NG CK   L  ARE  +++ ++GL P+   + T I 
Sbjct: 353 ALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLID 412

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
              K G   +A+ L+  ML  G  P++ TYN L+ G C+ G+++EA +L ++M G+G   
Sbjct: 413 AYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKA 472

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNML---RKGLSPTLVTYTVLIHAHAARGRLELAF 613
           D +TY  ++ A  + G+ R+   L + M    +KG    +VTY VLI     +G+LE A 
Sbjct: 473 DLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEAN 532

Query: 614 MYFSEMQVKGIRPNVITYNAL 634
              +EM  KG+ PN  TY+ L
Sbjct: 533 RLLNEMLEKGLIPNRTTYDIL 553



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 136/471 (28%), Positives = 239/471 (50%), Gaps = 41/471 (8%)

Query: 248 TMLDSFCKEGEMQEA--LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
            +LDSF K      +     L  +   GC+ N +  ++L+  + +NGE++ A        
Sbjct: 128 ALLDSFAKNAHYSNSTIFHSLSVLGSWGCA-NSIIVDMLVWAYVKNGEMDLALEGFDRAG 186

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
             G ++SA S NP                                   ++  L K GR+ 
Sbjct: 187 DYGFRLSALSCNP-----------------------------------MLVSLVKEGRIG 211

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
                + EM+R+ +  ++++++ ++ G C+ G   +A  + +++++    P+V+TYNT+I
Sbjct: 212 VVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTII 271

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           DG C+ G +  A  L + M+ + I P+ IT+ I+++G C+  N++ A++ F EM R+GLQ
Sbjct: 272 DGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQ 331

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           P+   Y + I G    G   EA  LQ++M   G  P+++TYN L++G CK   L+EA E+
Sbjct: 332 PNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREM 391

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
           L  +   G  P+ IT+ ++I A  + G +     L + ML  G+ P + TY  LI     
Sbjct: 392 LDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCR 451

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID---MEEEGILPN 662
            G ++ A     EM+  G++ +++TYN L++ LC+     +A  L  +   ME++G   N
Sbjct: 452 EGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRAN 511

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDY 713
             TY +LI   CN G  +EA RL  EML++ + P+  T+  L  + ++K +
Sbjct: 512 IVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGF 562



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 173/343 (50%)

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
           I  + L++ Y ++G +  A   FD         + ++ N ++  L + G + V + + + 
Sbjct: 160 IIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKE 219

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           MI + I  +V+T+ +++NG CK+G    A +   +M   G  P    Y T I G  K G 
Sbjct: 220 MIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGK 279

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
             +A  L +EM+AK   P+ IT+N+L+ G C+  ++  A ++  +M   G  P+ +TY S
Sbjct: 280 MFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNS 339

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           +I+     G L     L + M   GL P +VTY  LI+    +  L+ A     ++  +G
Sbjct: 340 LINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRG 399

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
           + PNVIT+N LI+   +  R+D A+ L   M + G+ PN  TY  LI   C  GN +EA 
Sbjct: 400 LAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEAR 459

Query: 684 RLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
           +L KEM    ++ D  T++ L+     K     AV  L+ +TL
Sbjct: 460 KLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTL 502


>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 524

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 155/507 (30%), Positives = 252/507 (49%), Gaps = 22/507 (4%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVL---RDNGFSVKAREVYRMMGEFGIKPSIVT 245
           V   +  F +MLR    P +   N+I+  L    +N + + A  +Y  +    I PSIVT
Sbjct: 27  VHDAISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPI-AISLYHRLQLNAITPSIVT 85

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           +NT+++ +C  GEM  A  +L ++   G  P+ +T   LI G   NG++ +A      ++
Sbjct: 86  FNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVI 145

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
             G +++  SY  +I G  + G    AL +  ++  + V   +  Y+ +I  LCK   V+
Sbjct: 146 ARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVT 205

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
           +A   + +M+ K V PD+++++ L+YG+C  G   EAF LF E+   N+ P V T+N L+
Sbjct: 206 EAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILV 265

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           D LC+ G  +  + +   M+ +                  +  ++ A+  FN + ++ + 
Sbjct: 266 DALCKEGSTKETKNVLAVMMKE------------------VNQVNKAKHVFNIIGKRRVT 307

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           PD  +YT  I    K+    EA  L  EM  KG  PD +TY+ L+ GLCK   +  A EL
Sbjct: 308 PDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWEL 367

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
           L +M   G   D ITYTS +HA  +   + +   L   +  +G+ P + TY +LI     
Sbjct: 368 LDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCK 427

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
            GR E A + F ++ +KG +  V TYN +INGLC     D+A  L   ME+ G  P+  T
Sbjct: 428 EGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVT 487

Query: 666 YTILINENCNAGNWQEALRLYKEMLDR 692
           Y  +I          +A +L +EM+ R
Sbjct: 488 YETIIRALFKNDENHKAEKLLREMIAR 514



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/412 (30%), Positives = 208/412 (50%), Gaps = 17/412 (4%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V  K+L+ G  PD      +IK L  NG   +A   +  +   G + + V+Y  +++  C
Sbjct: 105 VLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLC 164

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K GE + AL++L ++ G+  + N V Y+ +I    +   + +A  L   M+   +     
Sbjct: 165 KMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVV 224

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG------------ 362
           +++ +I G+   G   EA  L  EMV   + P + T+NIL+  LCK G            
Sbjct: 225 TFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVM 284

Query: 363 -----RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
                +V+ A+H F  + ++ V PD+ SY  ++   C+   + EA  LF+E+R + + P 
Sbjct: 285 MKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPD 344

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
            VTY++LIDGLC+   +  A +L + M  +G   DVITYT  ++  CK   +  A     
Sbjct: 345 KVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVK 404

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           ++  +G+QP+   Y   I G  K G    A  + +++L KG+   + TYN++++GLC  G
Sbjct: 405 KIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEG 464

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
             +EA  LL KM  +G  PD +TY +II A  +  +  +   L   M+ +GL
Sbjct: 465 LFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARGL 516



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 182/355 (51%), Gaps = 17/355 (4%)

Query: 222 GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY 281
           G +  A +V R +    +  ++V Y+T++DS CKE  + EA EL  +M  +  SP+ VT+
Sbjct: 167 GETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTF 226

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
           + LI GF   G+ ++A GL  +M+   +     ++N ++    ++G   E  N+   M+ 
Sbjct: 227 SALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMK 286

Query: 342 -----------------RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDII 384
                            R V P + +Y I+I  LCK   V +A   F EM  K + PD +
Sbjct: 287 EVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKV 346

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
           +Y++L+ G C+S  I  A+ L D++ +R     V+TY + +  LC+   ++ A  L + +
Sbjct: 347 TYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKI 406

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
            +QGI P++ TY I+++G CK G    A+  F ++L KG +   + Y   I G    G  
Sbjct: 407 KDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLF 466

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
            EA  L E+M   G  PD++TY  ++  L K     +A +LLR+M+  G + + +
Sbjct: 467 DEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARGLLEEKV 521



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/378 (26%), Positives = 179/378 (47%), Gaps = 50/378 (13%)

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           V DA   F+ MLR N  P II +N +L    +S N              N  P  ++   
Sbjct: 27  VHDAISSFYRMLRMNPSPSIIEFNKILGSLVKSNN--------------NNYPIAISL-- 70

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
                  Y  L++            I P ++T+  ++N  C +G +  A     ++L+ G
Sbjct: 71  -------YHRLQL----------NAITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMG 113

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
             PD    TT I G    G   EA    + ++A+GF  + ++Y +L++GLCK+G    A 
Sbjct: 114 YHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAAL 173

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
           ++LRK+ G     + + Y++II +  +   +    +L++ M+ K +SP +VT++ LI+  
Sbjct: 174 QVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGF 233

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR-----------------LRRIDQ 646
              G+ + AF  F EM +  I P+V T+N L++ LC+                 + ++++
Sbjct: 234 CMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNK 293

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
           A  +F  + +  + P+ ++YTI+I   C      EAL L+ EM  + I PD  T+S+L+ 
Sbjct: 294 AKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLID 353

Query: 707 KQLDKDYKVHAVEYLESL 724
                +   HA E L+ +
Sbjct: 354 GLCKSERISHAWELLDQM 371



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/299 (24%), Positives = 145/299 (48%), Gaps = 3/299 (1%)

Query: 120 VKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHG---ILDVLIGGGLSSCVSIKIL 176
           V  D   F  ++      G  + A+ +   +V  N++      ++L+        + +  
Sbjct: 219 VSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETK 278

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           ++L ++  + + V +   VFN + +  + PDV +   IIK L       +A  ++  M  
Sbjct: 279 NVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRC 338

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            GI P  VTY++++D  CK   +  A ELL +M  RG   + +TY   +    +N ++++
Sbjct: 339 KGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDK 398

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  L++ +   G++ + ++YN +I G  ++G    A  + ++++ +G   T+ TYNI+I 
Sbjct: 399 AVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMIN 458

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
           GLC  G   +A     +M      PD+++Y T++    ++    +A  L  E+ +R L+
Sbjct: 459 GLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARGLL 517


>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Brachypodium distachyon]
          Length = 556

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 134/418 (32%), Positives = 223/418 (53%), Gaps = 5/418 (1%)

Query: 257 GEMQEALELLWEMQGRGCSPNGVT---YNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           G++  A +LL   +     P  VT    +V++ GF ++G ++ A GL+ ++ + G+ ++A
Sbjct: 126 GQLPAAADLLG--KAIASCPASVTPLSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNA 183

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
             YN ++  Y+ +        L +EM  RGV PT+ TY IL+ GL + G +S     + E
Sbjct: 184 CCYNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDE 243

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M RKNV  D+  Y+ ++  YCR GN+  A  +FDE     + P   TY  LI+G C+ G 
Sbjct: 244 MKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQ 303

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           +E A+ L  +M  +G+  + I +  M++G C+ G +  A E    M + G++ D + Y T
Sbjct: 304 IEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNT 363

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
              G  ++    +A +L   M  KG  P+ ++Y  L+    K G + EA  L R M G G
Sbjct: 364 LACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKG 423

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
             P  +TY  +I   ++ G +R        M +KGL P + TY  L+H H   G++++A 
Sbjct: 424 SRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVAL 483

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
             F EM+ +G +PNV+ Y AL++GL +  R ++A+ L+ DM   G+ P+   Y++L+ 
Sbjct: 484 RLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVG 541



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 129/408 (31%), Positives = 209/408 (51%), Gaps = 3/408 (0%)

Query: 241 PSIVT---YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           P+ VT    + ++D FCK G + +A  LL E+   G   N   YN L+  ++R    +  
Sbjct: 143 PASVTPLSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAV 202

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
            GL+++M   G++ +  +Y  ++ G S  G + +   + +EM  + VA  +  Y+ +I  
Sbjct: 203 AGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINA 262

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
            C+ G V  A   F E +   V P+  +Y  L+ G+C+ G I  A +L  +++ R +   
Sbjct: 263 YCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHN 322

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
            + +NT+IDG CR+G +E A ++K  M   GI  D+ TY  +  G C++  +  A++  +
Sbjct: 323 QIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLH 382

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            M  KG+ P+  +YTT I+   K GD  EA RL  +M  KG  P ++TYNV++ G  K G
Sbjct: 383 IMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNG 442

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
           S+ EA    ++M   G +PD  TY  ++H     G +     LF  M  +G  P +V YT
Sbjct: 443 SIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYT 502

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
            L+   A  GR E AF  + +M   G+ P+   Y+ L+  L    R D
Sbjct: 503 ALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGSLHTDSRKD 550



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/382 (32%), Positives = 205/382 (53%), Gaps = 6/382 (1%)

Query: 154 NMHGILDVLI--GGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNC 211
           + HG+LD L   G GL++C    +LD     YT++   +    +  +M   G+ P V   
Sbjct: 166 DAHGLLDELPRHGVGLNACCYNSLLD----SYTRQRNDDAVAGLLKEMENRGVEPTVGTY 221

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
             ++  L   G   K   VY  M    +   +  Y+ +++++C+ G ++ A E+  E  G
Sbjct: 222 TILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVG 281

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
            G  PN  TY  LI GF + G++E A  L+ DM   G+  +   +N +I GY   G++ +
Sbjct: 282 HGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEK 341

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
           AL ++  M   G+   + TYN L  GLC+  R+ DA+     M  K V P+ +SY TL+ 
Sbjct: 342 ALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLIS 401

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
            + + G++ EA  LF ++  +   P+VVTYN +IDG  + G +  A++ K+ M  +G++P
Sbjct: 402 IHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVP 461

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           D+ TY  +V+G C  G + +A   F EM  +G +P+  AYT  ++G  K G + EA++L 
Sbjct: 462 DIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLY 521

Query: 512 EEMLAKGFPPDLITYNVLVHGL 533
           ++MLA G  PD   Y+VLV  L
Sbjct: 522 DDMLAAGLTPDDTLYSVLVGSL 543



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 117/359 (32%), Positives = 190/359 (52%)

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
           T  + ++++ G CK G V DA     E+ R  V  +   YN+LL  Y R  N      L 
Sbjct: 147 TPLSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLL 206

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
            E+ +R + PTV TY  L+DGL R GD+   + + + M  + +  DV  Y+ ++N  C+ 
Sbjct: 207 KEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRG 266

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           GN+  A E F+E +  G++P+   Y   I G  K+G    A  L  +M  +G   + I +
Sbjct: 267 GNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVF 326

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           N ++ G C+ G +E+A E+   M   G   D  TY ++      +  +   + L + M  
Sbjct: 327 NTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAE 386

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
           KG++P  V+YT LI  HA  G +  A   F +M+ KG RP+V+TYN +I+G  +   I +
Sbjct: 387 KGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIRE 446

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           A     +ME++G++P+ YTY  L++ +C  G    ALRL++EM  R  +P+   ++AL+
Sbjct: 447 AERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALV 505


>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 825

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 173/662 (26%), Positives = 295/662 (44%), Gaps = 91/662 (13%)

Query: 84  QAVVSDPELLVRVLNRIREKPRIALRFFRWVETQP------GVKRDEFV----------- 126
           + VVSD    V  ++R+ +   + L+FF W  T+P      GV     +           
Sbjct: 57  KVVVSDVAHFV--IDRVHD-AELGLKFFDWASTRPFSCSLDGVAHSSLLKLLASYRVFPE 113

Query: 127 -------------------FCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGL 167
                              F  ++    ESG L  A  +  TV    MH      +    
Sbjct: 114 IELVLENMKAQHLKPTREAFSALILAYAESGSLDRALQLFHTVR--EMHNCFPTFVAS-- 169

Query: 168 SSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRN----GLLPDVKNCNRIIKVLRDNGF 223
                    +LLL    K   V+  L +++KML+     G + D    + ++K L + G 
Sbjct: 170 ---------NLLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIMVKGLCNLGK 220

Query: 224 SVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNV 283
             + R + +        P +V YN ++D +CK+G++Q A   L E++ +G  P   TY  
Sbjct: 221 IEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTVETYGA 280

Query: 284 LITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG 343
           LI GF + GE E    L+ +M   GL ++   +N +I    + GL+ EA  +   M   G
Sbjct: 281 LINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMG 340

Query: 344 VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF 403
             P + TYNI+I   CK GR+ +A     +   + ++P+  SY  L++ YC+ G+  +A 
Sbjct: 341 CGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKAS 400

Query: 404 LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
            +   +        +V+Y   I G+   G+++VA  ++E M+ +G+ PD   Y I+++G 
Sbjct: 401 GMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGL 460

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
           CK G +   +   +EML + +QPD + + T I G ++ G+  EA ++ + ++ KG  P +
Sbjct: 461 CKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGI 520

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
           + YN ++ G CK G + +A   L +M             S+ HA                
Sbjct: 521 VGYNAMIKGFCKFGKMTDALSCLNEM------------NSVHHA---------------- 552

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
                  P   TY+ +I  +  +  +  A   F +M     +PNVITY +LING C+   
Sbjct: 553 -------PDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKAD 605

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSA 703
           + +A  +F  M+   ++PN  TYT L+     AG  + A  +++ ML     P+  T   
Sbjct: 606 MIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHY 665

Query: 704 LL 705
           L+
Sbjct: 666 LI 667



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 146/513 (28%), Positives = 243/513 (47%), Gaps = 14/513 (2%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y KK  ++      N++   G+LP V+    +I      G      ++   M   G+  +
Sbjct: 250 YCKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMN 309

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +  +N ++D+  K G + EA E+L  M   GC P+  TYN++I    + G +E+A  L+ 
Sbjct: 310 VKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLE 369

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
              + GL  +  SY P++  Y +KG  V+A  +   +   G    L +Y   I+G+   G
Sbjct: 370 KAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAG 429

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            +  A     +M+ K V PD   YN L+ G C+ G I    LL  E+  RN+ P V  + 
Sbjct: 430 EIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFA 489

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           TLIDG  R G+L+ A ++ + +I +G+ P ++ Y  M+ G CK G ++ A    NEM   
Sbjct: 490 TLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSV 549

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
              PD + Y+T I G +K  D S A ++  +M+   F P++ITY  L++G CK   +  A
Sbjct: 550 HHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRA 609

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            ++   M     +P+ +TYT+++    + G   R   +F  ML  G  P   T+  LI+ 
Sbjct: 610 EKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLING 669

Query: 603 --------------HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
                          +      L   +F+ M + G    +  YN++I  LC+   +D A 
Sbjct: 670 LTNTATSPVLIEEKDSKENERSLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQ 729

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
            L   M  +G L +   +T L++  C+ G  +E
Sbjct: 730 LLLTKMLTKGFLIDSVCFTALLHGLCHKGKSKE 762



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 144/514 (28%), Positives = 229/514 (44%), Gaps = 84/514 (16%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K    E    +  +M   GL  +VK  N +I      G   +A E+ R M E G  P 
Sbjct: 285 FCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPD 344

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           I TYN M++  CK G ++EA ELL + + RG  PN  +Y  L+  + + G+  +A G++ 
Sbjct: 345 ITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLF 404

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            + ++G K    SY   I G    G +  AL + E+M+ +GV P    YNIL+ GLCK G
Sbjct: 405 RIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKG 464

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R+   +    EML +NV PD+  + TL+ G+ R+G + EA  +F  +  + + P +V YN
Sbjct: 465 RIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYN 524

Query: 423 TLIDGLCRYG-----------------------------------DLEVAQQLKENMINQ 447
            +I G C++G                                   D+  A ++   M+  
Sbjct: 525 AMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKH 584

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
              P+VITYT ++NG CK  ++  A + F+ M    L P+   YTT + G  K G    A
Sbjct: 585 KFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERA 644

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGL---------------------------------- 533
             + E ML  G  P+  T++ L++GL                                  
Sbjct: 645 TSIFELMLMNGCLPNDATFHYLINGLTNTATSPVLIEEKDSKENERSLILDFFTMMLLDG 704

Query: 534 ---------------CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
                          CK G+++ A  LL KM+  GF+ D + +T+++H     G  +  R
Sbjct: 705 WDQVIAAYNSVIVCLCKHGTVDTAQLLLTKMLTKGFLIDSVCFTALLHGLCHKGKSKEWR 764

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
           ++ +  L K    T V Y++ +  +  +GRL  A
Sbjct: 765 NIISCDLNKIELQTAVKYSLTLDKYLYQGRLSEA 798



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 85/365 (23%), Positives = 154/365 (42%), Gaps = 42/365 (11%)

Query: 84  QAVVSDPELLVRVLNRIREKPRI-ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRS 142
           + V  D ++   +++ + +K RI A++          V+ D +VF T+++  I +G L  
Sbjct: 444 KGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDE 503

Query: 143 AYWVVETVVCVNMH-GIL--DVLIGGGLSSCVSIKILDLLLLI----------------- 182
           A  + + ++   +  GI+  + +I G    C   K+ D L  +                 
Sbjct: 504 AIKIFKVIIRKGVDPGIVGYNAMIKG---FCKFGKMTDALSCLNEMNSVHHAPDEYTYST 560

Query: 183 ----YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
               Y K+  +   L +F +M+++   P+V     +I         ++A +V+  M  F 
Sbjct: 561 VIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFD 620

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG------ 292
           + P++VTY T++  F K G+ + A  +   M   GC PN  T++ LI G +         
Sbjct: 621 LVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGLTNTATSPVLI 680

Query: 293 ----ELEQARGLIRD----MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
                 E  R LI D    ML  G      +YN +I    + G +  A  L  +M+T+G 
Sbjct: 681 EEKDSKENERSLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQLLLTKMLTKGF 740

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
                 +  L++GLC  G+  + R+     L K  +   + Y+  L  Y   G + EA +
Sbjct: 741 LIDSVCFTALLHGLCHKGKSKEWRNIISCDLNKIELQTAVKYSLTLDKYLYQGRLSEASV 800

Query: 405 LFDEL 409
           +   L
Sbjct: 801 ILQTL 805


>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 680

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 153/502 (30%), Positives = 239/502 (47%), Gaps = 38/502 (7%)

Query: 228 REVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITG 287
           R     M + G +PS+VTY  +L++ CK     EA+ +L EM+ +GC+PN VTYNV+I G
Sbjct: 172 RSPCSTMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIING 231

Query: 288 FSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG------------------------- 322
             R G ++ A+ ++  +   G +    SY  ++ G                         
Sbjct: 232 MCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPN 291

Query: 323 ----------YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
                     +   G++  A+ + ++M   G  P     NI+I  +CK GRV DA     
Sbjct: 292 EVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLN 351

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
            M      PD ISY T+L G CR+G    A  L  E+  +N  P  VT+NT I  LC+ G
Sbjct: 352 NMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKG 411

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
            +E A +L E M   G    ++TY  +V+G C  G +  A E FN +     +P+   YT
Sbjct: 412 LIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL---PCEPNTITYT 468

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
           T + G         A  L  EM+ K  P + +T+NVLV   C+ G +EEA EL+ +M+  
Sbjct: 469 TLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEH 528

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
           G  P+ IT+ +++    +  +     +L + ++ KG+S   +TY+ ++   +   R E A
Sbjct: 529 GCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEA 588

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
                 +Q  G+RP V  YN ++  LC+    DQA   F  M   G +PN+ TY ILI  
Sbjct: 589 IQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEG 648

Query: 673 NCNAGNWQEALRLYKEMLDREI 694
             + G  +EA  +  E+  + +
Sbjct: 649 LAHEGLLKEARYVLSELYAKGV 670



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 131/439 (29%), Positives = 216/439 (49%), Gaps = 3/439 (0%)

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
           +G S   E    R     ML+ G + S  +Y  ++    +     EA+N+ +EM  +G  
Sbjct: 160 SGASATAEGSATRSPCSTMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCT 219

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P + TYN++I G+C+ GRV DA+     +      PDI+SY T+L G C +    +  +L
Sbjct: 220 PNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVL 279

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
           F E+  +  VP  VT++ L+   CR G +E A Q+ + M   G  P+     I++N  CK
Sbjct: 280 FAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICK 339

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
            G +  A +F N M   G  PD  +YTT + G  + G    A  L  EM+ K  PP+ +T
Sbjct: 340 QGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVT 399

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           +N  +  LC+ G +E+A +L+  M   G     +TY +++H     G +    +LFNN+ 
Sbjct: 400 FNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL- 458

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
                P  +TYT L+       RL+ A    +EM  K    N +T+N L++  C+   ++
Sbjct: 459 --PCEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVE 516

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +A  L   M E G  PN  T+  L++      N +EAL L   ++ + +  D  T+S+++
Sbjct: 517 EAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVV 576

Query: 706 LKQLDKDYKVHAVEYLESL 724
                +D    A++ L ++
Sbjct: 577 DVLSREDRTEEAIQMLHAV 595



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/458 (26%), Positives = 220/458 (48%), Gaps = 6/458 (1%)

Query: 269 MQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
           M  RGC P+ VTY VL+    ++    +A  ++ +M   G   +  +YN II G   +G 
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237

Query: 329 LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNT 388
           + +A  +   + + G  P + +Y  ++ GLC   R  D +  F EM+ K  +P+ ++++ 
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297

Query: 389 LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
           L+  +CR G +  A  +  ++      P     N +I+ +C+ G ++ A     NM   G
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
             PD I+YT ++ G C+ G    A+E   EM+RK   P+   + T I    + G   +A 
Sbjct: 358 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAI 417

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
           +L E M   G    ++TYN LVHG C  G ++ A EL   +  +   P+ ITYT+++   
Sbjct: 418 KLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLLTGL 474

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
                L    +L   M++K      VT+ VL+     +G +E A    ++M   G  PN+
Sbjct: 475 CHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNL 534

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
           IT+N L++G+ +    ++A  L   +  +G+  +  TY+ +++        +EA+++   
Sbjct: 535 ITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHA 594

Query: 689 MLDREIEPDYCTHSALLL---KQLDKDYKVHAVEYLES 723
           + D  + P    ++ +L    K+ + D  +    Y+ S
Sbjct: 595 VQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVS 632


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 148/459 (32%), Positives = 236/459 (51%), Gaps = 8/459 (1%)

Query: 245 TYNTMLDSFCKEGEMQEALELLW-EMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           T N +L +  K     +A ++   E+ G+ C  N +TYN LI GF + G++E+A  L+ +
Sbjct: 71  TCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAE 130

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M + G      +++ I+      G L  A+    E V    AP    +NIL++GLCK  +
Sbjct: 131 MKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVE--CAPDSVLFNILVHGLCKANQ 188

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           +S+AR    EM  + ++PD+++YN+L+ G C+S  + EA  L + +  R + P +VTYNT
Sbjct: 189 LSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNT 248

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           LI G C+ G   +A QL E MI  G  PDV+T+  +++G C+   +  A E  + +++KG
Sbjct: 249 LIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLH-LMKKG 307

Query: 484 L-QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           L  P+   Y   I+G    G  +EA  L  EM  +G  PD+ITYN L+   C+   +E+A
Sbjct: 308 LCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQA 367

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            ++   MV  G IPD I+Y ++  A L+         L +NM   G  P L T+  L+  
Sbjct: 368 FQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEG 427

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
                RL+ A    + M+  G  P   TY  L+ GLC+  R+D A  + + M  EGI P 
Sbjct: 428 LCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPL 487

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDRE---IEPDY 698
             +   +++     G    AL  + +++  E    +P Y
Sbjct: 488 VSSSGTIVHTLAREGKQDLALHYFDQVVAAESKACDPSY 526



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 139/443 (31%), Positives = 230/443 (51%), Gaps = 5/443 (1%)

Query: 211 CNRIIKVLRDNGFSVKAREVYR--MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWE 268
           CN +++ L       +A +++R  ++G+     + +TYNT++  FCK G+M+ A +LL E
Sbjct: 72  CNCLLRTLVKARRHHQAYQIFRDELLGQH-CDTNHITYNTLIGGFCKAGDMERAFQLLAE 130

Query: 269 MQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
           M+ RG SP+ VT++ ++      G L +A    R+ ++      +  +N ++ G  +   
Sbjct: 131 MKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECA--PDSVLFNILVHGLCKANQ 188

Query: 329 LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNT 388
           L EA  + EEM  RG+ P + TYN LI GLCK  R+ +AR     M+++ V P++++YNT
Sbjct: 189 LSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNT 248

Query: 389 LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
           L+YGYC++G  G A  L + +      P VVT+N+LI G C+   ++ A ++   M    
Sbjct: 249 LIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGL 308

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
             P+++TY ++++G C  G  + A E  +EM  +G+ PD   Y + I    +     +A+
Sbjct: 309 CAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAF 368

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
           ++Q  M+ +G  PD I+Y  L   L K    +EA  LL  M   G IP+  T+ S++   
Sbjct: 369 QIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGL 428

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
                L   R L   M R G  P   TY VL+      GR++ A      M  +GI+P V
Sbjct: 429 CCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLV 488

Query: 629 ITYNALINGLCRLRRIDQAYGLF 651
            +   +++ L R  + D A   F
Sbjct: 489 SSSGTIVHTLAREGKQDLALHYF 511



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/336 (34%), Positives = 177/336 (52%), Gaps = 6/336 (1%)

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLF-DELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           R   I +  + N LL    ++    +A+ +F DEL  ++     +TYNTLI G C+ GD+
Sbjct: 62  RGESIHNNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDM 121

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           E A QL   M  +G  PDV+T++ +V   C  GNLS A ++F E +     PD   +   
Sbjct: 122 ERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVE--CAPDSVLFNIL 179

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           + G  K    SEA ++ EEM  +G  PD++TYN L+ GLCK   +EEA +LL  MV    
Sbjct: 180 VHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKV 239

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            P+ +TY ++I+   + G       L   M++ G  P +VT+  LI     + +++ A  
Sbjct: 240 RPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACE 299

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
               M+     PN++TYN LI+GLC   R ++A  L  +M+  GILP+  TY  LI   C
Sbjct: 300 VLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFC 359

Query: 675 NAGNWQEALRLYKEMLDREIEPD---YCTHSALLLK 707
                ++A ++   M++R + PD   YCT +  LLK
Sbjct: 360 RNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLK 395



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 181/369 (49%), Gaps = 18/369 (4%)

Query: 119 GVKRDEFVFCTILEILIESG-LLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILD 177
           G   D     +I++ L  +G L R+  +  E+V C     + ++L+ G            
Sbjct: 135 GHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECAPDSVLFNILVHG------------ 182

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
                  K + + +   +  +M   G++PDV   N +I  L  +    +AR++   M + 
Sbjct: 183 -----LCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKR 237

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
            ++P++VTYNT++  +CK G    A +L+  M   G  P+ VT+N LI+GF +  ++++A
Sbjct: 238 KVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKA 297

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             ++  M K     +  +YN +I G  + G   EA  L  EM  RG+ P + TYN LI  
Sbjct: 298 CEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGI 357

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
            C+  ++  A      M+ + VIPD ISY TL     +S    EAF L D +     +P 
Sbjct: 358 FCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPN 417

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           + T+N+L++GLC    L+ A+ L   M   G  P   TY ++V G CK G +  A+E   
Sbjct: 418 LFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLV 477

Query: 478 EMLRKGLQP 486
            M+ +G+QP
Sbjct: 478 MMVSEGIQP 486



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 184/376 (48%), Gaps = 21/376 (5%)

Query: 107 ALRFFR-WVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGIL-DVLIG 164
           A+++FR  VE  P    D  +F  ++  L ++  L  A  ++E +   +  GI+ DV+  
Sbjct: 159 AMQYFRESVECAP----DSVLFNILVHGLCKANQLSEARQMIEEM---SERGIVPDVVTY 211

Query: 165 GGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS 224
             L        +D L     K   +E+   +   M++  + P++   N +I      G +
Sbjct: 212 NSL--------IDGL----CKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCT 259

Query: 225 VKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVL 284
             A ++   M + G  P +VT+N+++  FC++ ++ +A E+L  M+   C+PN VTYNVL
Sbjct: 260 GLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVL 319

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           I+G    G   +A  L+ +M   G+     +YN +I  +     + +A  ++  MV RGV
Sbjct: 320 ISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGV 379

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
            P   +Y  L   L K  R  +A      M     IP++ ++N+L+ G C S  + EA  
Sbjct: 380 IPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARH 439

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
           L   +R     P   TY  L+ GLC+ G ++ A+++   M+++GI P V +   +V+   
Sbjct: 440 LLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLA 499

Query: 465 KMGNLSMAREFFNEML 480
           + G   +A  +F++++
Sbjct: 500 REGKQDLALHYFDQVV 515



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 114/223 (51%), Gaps = 3/223 (1%)

Query: 506 EAYRL-QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
           +AY++ ++E+L +    + ITYN L+ G CK G +E A +LL +M   G  PD +T++SI
Sbjct: 87  QAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSI 146

Query: 565 IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
           + A    G+L R    F   +    +P  V + +L+H      +L  A     EM  +GI
Sbjct: 147 VQALCNTGNLSRAMQYFRESVE--CAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGI 204

Query: 625 RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
            P+V+TYN+LI+GLC+  R+++A  L   M +  + PN  TY  LI   C  G    A +
Sbjct: 205 VPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQ 264

Query: 685 LYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLG 727
           L + M+     PD  T ++L+     K     A E L  +  G
Sbjct: 265 LIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKG 307



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 119/267 (44%), Gaps = 35/267 (13%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +  +M+++G  PDV   N +I          KA EV  +M +    P++VTYN ++   C
Sbjct: 265 LIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLC 324

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA---------RGLIRD-- 303
             G   EA ELL EM GRG  P+ +TYN LI  F RN ++EQA         RG+I D  
Sbjct: 325 DAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGI 384

Query: 304 ------------------------MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
                                   M   G   +  ++N ++ G      L EA +L   M
Sbjct: 385 SYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVM 444

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
              G  P  +TY +L+ GLCK GRV DA+     M+ + + P + S  T+++   R G  
Sbjct: 445 RRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQ 504

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLID 426
             A   FD++ +        +Y  L++
Sbjct: 505 DLALHYFDQVVAAESKACDPSYQKLLE 531


>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
 gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
           [Arabidopsis thaliana]
 gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 136/442 (30%), Positives = 244/442 (55%), Gaps = 5/442 (1%)

Query: 170 CVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE 229
           CV+  I D+L+L Y   S  E     F +    G      +C  ++  L     S     
Sbjct: 150 CVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEY 209

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           VY+ M    I+P++ T+N ++++ CK G+M +A +++ +M+  GCSPN V+YN LI G+ 
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269

Query: 290 R---NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           +   NG++ +A  ++++M++  +  +  ++N +I G+ +   L  ++ + +EM+ + V P
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP 329

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
            + +YN LI GLC  G++S+A     +M+   V P++I+YN L+ G+C++  + EA  +F
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMF 389

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
             ++ +  VPT   YN LID  C+ G ++    LKE M  +GI+PDV TY  ++ G C+ 
Sbjct: 390 GSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           GN+  A++ F+++  KGL PD   +   + G  + G++ +A  L +EM   G  P  +TY
Sbjct: 450 GNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTY 508

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI-TYTSIIHASLEMGDLRRGRDLFNNML 585
           N+++ G CK G+L+ A  +  +M  +  +  ++ +Y  ++    + G L     L N ML
Sbjct: 509 NIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEML 568

Query: 586 RKGLSPTLVTYTVLIHAHAARG 607
            KGL P  +TY ++      +G
Sbjct: 569 EKGLVPNRITYEIVKEEMVDQG 590



 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 141/408 (34%), Positives = 226/408 (55%), Gaps = 8/408 (1%)

Query: 169 SCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR 228
           S +S K L + LL   + + VE    V+ +M+R  + P+V   N +I  L   G   KAR
Sbjct: 187 SALSCKPLMIALLKENRSADVE---YVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKAR 243

Query: 229 EVYRMMGEFGIKPSIVTYNTMLDSFCK---EGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           +V   M  +G  P++V+YNT++D +CK    G+M +A  +L EM     SPN  T+N+LI
Sbjct: 244 DVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILI 303

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            GF ++  L  +  + ++ML   +K +  SYN +I G    G + EA+++ ++MV+ GV 
Sbjct: 304 DGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQ 363

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P L TYN LI G CK   + +A   F  +  +  +P    YN L+  YC+ G I + F L
Sbjct: 364 PNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFAL 423

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
            +E+    +VP V TYN LI GLCR G++E A++L + + ++G LPD++T+ I++ G C+
Sbjct: 424 KEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCR 482

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM-LAKGFPPDLI 524
            G    A     EM + GL+P    Y   + G  K G+   A  ++ +M   +    ++ 
Sbjct: 483 KGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVA 542

Query: 525 TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           +YNVL+ G  + G LE+AN LL +M+  G +P+ ITY  +    ++ G
Sbjct: 543 SYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQG 590



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 136/525 (25%), Positives = 254/525 (48%), Gaps = 46/525 (8%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIK-VLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
           +F +++ + L PD+  C R    +++++  SV     ++++             + LD F
Sbjct: 70  LFRQLISSELDPDL--CLRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGF 127

Query: 254 CKEGEMQEALELLW--EMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKV 311
            + G   +   +     M    C  N +  ++L+  ++ N   E      +     G K+
Sbjct: 128 VRNGSDHQVHSIFHAISMCDNVCV-NSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKL 186

Query: 312 SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRF 371
           SA S  P++    ++    +   + +EM+ R + P + T+N++I  LCK G+++ AR   
Sbjct: 187 SALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVM 246

Query: 372 FEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL--------------------------- 404
            +M      P+++SYNTL+ GYC+ G  G+ +                            
Sbjct: 247 EDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGF 306

Query: 405 -----------LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
                      +F E+  +++ P V++YN+LI+GLC  G +  A  +++ M++ G+ P++
Sbjct: 307 WKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNL 366

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
           ITY  ++NG CK   L  A + F  +  +G  P    Y   I    KLG   + + L+EE
Sbjct: 367 ITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEE 426

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           M  +G  PD+ TYN L+ GLC+ G++E A +L  ++   G +PD +T+  ++      G+
Sbjct: 427 MEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGE 485

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV-KGIRPNVITYN 632
            R+   L   M + GL P  +TY +++  +   G L+ A    ++M+  + +R NV +YN
Sbjct: 486 SRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYN 545

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
            L+ G  +  +++ A  L  +M E+G++PN+ TY I+  E  + G
Sbjct: 546 VLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQG 590



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 106/356 (29%), Positives = 195/356 (54%), Gaps = 5/356 (1%)

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           L+  L K  R +D  + + EM+R+ + P++ ++N ++   C++G + +A  + ++++   
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253

Query: 414 LVPTVVTYNTLIDGLCRYG---DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
             P VV+YNTLIDG C+ G    +  A  + + M+   + P++ T+ I+++G  K  NL 
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            + + F EML + ++P+  +Y + I G    G  SEA  ++++M++ G  P+LITYN L+
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
           +G CK   L+EA ++   + G G +P    Y  +I A  ++G +  G  L   M R+G+ 
Sbjct: 374 NGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           P + TY  LI      G +E A   F ++  KG+ P+++T++ L+ G CR     +A  L
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAML 492

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM-LDREIEPDYCTHSALL 705
             +M + G+ P   TY I++   C  GN + A  +  +M  +R +  +  +++ LL
Sbjct: 493 LKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLL 548



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/394 (25%), Positives = 175/394 (44%), Gaps = 71/394 (18%)

Query: 115 ETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIK 174
           + QP V    F F  ++  L ++G +  A  V+E           D+ + G   + VS  
Sbjct: 218 KIQPNV----FTFNVVINALCKTGKMNKARDVME-----------DMKVYGCSPNVVSYN 262

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
            L            + +   V  +M+ N + P++   N +I     +     + +V++ M
Sbjct: 263 TLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEM 322

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
            +  +KP++++YN++++  C  G++ EA+ +  +M   G  PN +TYN LI GF +N  L
Sbjct: 323 LDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDML 382

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           ++A  +   +   G   +   YN +I  Y + G + +   L+EEM   G+ P + TYN L
Sbjct: 383 KEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCL 442

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           I GLC+ G +  A+ + F+ L    +PD+++++ L+ GYCR G   +A +L  E+    L
Sbjct: 443 IAGLCRNGNIEAAK-KLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGL 501

Query: 415 VPTVVTYNTLIDGLCRYGD------------------------------------LEVAQ 438
            P  +TYN ++ G C+ G+                                    LE A 
Sbjct: 502 KPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDAN 561

Query: 439 QL-------------------KENMINQGILPDV 453
            L                   KE M++QG +PD+
Sbjct: 562 MLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDI 595



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 116/214 (54%), Gaps = 2/214 (0%)

Query: 166 GLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSV 225
           G  +  + ++ ++L+  Y K   ++    +  +M R G++PDV   N +I  L  NG   
Sbjct: 394 GQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIE 453

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
            A++++  +   G+ P +VT++ +++ +C++GE ++A  LL EM   G  P  +TYN+++
Sbjct: 454 AAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVM 512

Query: 286 TGFSRNGELEQARGLIRDMLK-LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
            G+ + G L+ A  +   M K   L+++  SYN ++ GYS+KG L +A  L  EM+ +G+
Sbjct: 513 KGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGL 572

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
            P   TY I+   +   G V D     F +  K+
Sbjct: 573 VPNRITYEIVKEEMVDQGFVPDIEGHLFNVSTKS 606


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 158/545 (28%), Positives = 276/545 (50%), Gaps = 15/545 (2%)

Query: 171 VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRN--GLLPDVKNCNRIIKVLRDNGFS---- 224
           V++  L+L+L  + +    ++ + +F++M RN   ++PD    N ++     NGF     
Sbjct: 110 VNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLV-----NGFCKAKR 164

Query: 225 -VKAREVYRMMGEFG-IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYN 282
             +AR ++  M + G  +P++VTY+ ++D +CK GE+ E L LL EM+  G   +   Y+
Sbjct: 165 LAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYS 224

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
            LI+ F   G++E  R L  +ML+  +  +  +Y+ ++ G    G   EA  + ++M  R
Sbjct: 225 SLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTAR 284

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           GV P +  Y +L  GLCK GR  DA      M++K   P  ++YN ++ G C+   + +A
Sbjct: 285 GVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDA 344

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG--ILPDVITYTIMV 460
           F + + +  +   P  VTYNTL+ GLC  G +  A  L + ++++   + PDV T   ++
Sbjct: 345 FGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLI 404

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
            G CK G +  A    + M+  GLQ +   Y   I G L      EA +L +  +  GF 
Sbjct: 405 QGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFS 464

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           P+ +TY+V+++GLCK+  L  A  L  KM   G  P  I Y +++ +      L + R L
Sbjct: 465 PNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSL 524

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
           F  M     +  +V++ ++I      G ++ A    SEM +  + P+ +T++ LIN   +
Sbjct: 525 FQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSK 584

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
           L  +D+A GL+  M   G +P    +  L+      G  ++ + L  +M D+++  D   
Sbjct: 585 LGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKL 644

Query: 701 HSALL 705
            S +L
Sbjct: 645 TSTIL 649



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 153/516 (29%), Positives = 253/516 (49%), Gaps = 7/516 (1%)

Query: 181 LIYTKKSMVEQCLLVFNKMLRNGLL--PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           + +T+   +   + +F++ + N     P    C+ +I  LR          VY  M    
Sbjct: 13  IAHTQPHSLSDAVSLFHRTIDNDPTSPPSEPACSTLIDNLRKARQYDAVVSVYHKMVSAL 72

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           + P   + + + +SF        A  +L  M  RG   N    N+++ GF R+G+ ++A 
Sbjct: 73  VLPRFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAM 132

Query: 299 GLIRDMLKLGLKVSAH--SYNPIICGYSEKGLLVEALNLEEEMVTRG-VAPTLATYNILI 355
            L   M +    V     +YN ++ G+ +   L EA  L E M   G   P L TY++LI
Sbjct: 133 SLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLI 192

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
              CK G V +      EM R+ +  D+  Y++L+  +C  G+I     LFDE+  R + 
Sbjct: 193 DCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVS 252

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P VVTY+ L+ GL R G    A ++ ++M  +G+ PDV+ YT++ +G CK G    A + 
Sbjct: 253 PNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKV 312

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
            + M++KG +P    Y   + G  K     +A+ + E M+ KG  PD +TYN L+ GLC 
Sbjct: 313 LDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCG 372

Query: 536 LGSLEEANELLRKMVGDGF--IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
            G + EA +L + ++ + F   PD  T  ++I    + G +     + ++M+  GL   +
Sbjct: 373 AGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNI 432

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
           VTY  LI  + A  +L  A   +      G  PN +TY+ +INGLC+++ +  A GLF  
Sbjct: 433 VTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCK 492

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           M++ GI P    Y  L+   C   + ++A  L++EM
Sbjct: 493 MKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEM 528



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 138/471 (29%), Positives = 236/471 (50%), Gaps = 7/471 (1%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PS    +T++D+  K  +    + +  +M      P   + + L   F        A  +
Sbjct: 40  PSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSV 99

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR--GVAPTLATYNILIYGL 358
           +  M K G  V+ ++ N ++ G+   G   +A++L  +M      V P   TYN L+ G 
Sbjct: 100 LSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGF 159

Query: 359 CKWGRVSDARHRFFEMLRK--NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           CK  R+++AR   FE ++K  +  P++++Y+ L+  YC+SG +GE   L +E+    L  
Sbjct: 160 CKAKRLAEAR-VLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKA 218

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
            V  Y++LI   C  GD+E  ++L + M+ + + P+V+TY+ ++ G  + G    A E  
Sbjct: 219 DVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEML 278

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
            +M  +G++PD  AYT    G  K G   +A ++ + M+ KG  P  +TYNV+V+GLCK 
Sbjct: 279 KDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKE 338

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG--LSPTLV 594
             +++A  ++  MV  G  PD +TY +++      G +    DL+  +L +   + P + 
Sbjct: 339 DRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVF 398

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           T   LI      GR+  A    S M   G++ N++TYN LI G    R++ +A  L+   
Sbjct: 399 TCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYA 458

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            E G  PN  TY+++IN  C       A  L+ +M D  I P    ++AL+
Sbjct: 459 VESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALM 509



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 129/416 (31%), Positives = 210/416 (50%), Gaps = 4/416 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F++MLR  + P+V   + +++ L   G   +A E+ + M   G++P +V Y  + D  C
Sbjct: 242 LFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLC 301

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K G   +A+++L  M  +G  P  +TYNV++ G  +   ++ A G++  M+K G K  A 
Sbjct: 302 KNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAV 361

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRG--VAPTLATYNILIYGLCKWGRVSDARHRFF 372
           +YN ++ G    G + EA++L + +++    V P + T N LI GLCK GRV DA     
Sbjct: 362 TYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHS 421

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
            M+   +  +I++YN L+ GY  +  + EA  L+         P  +TY+ +I+GLC+  
Sbjct: 422 SMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQ 481

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
            L VA+ L   M + GI P VI Y  ++   C+  +L  AR  F EM       D  ++ 
Sbjct: 482 MLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFN 541

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
             I G LK GD   A  L  EM      PD +T+++L++   KLG L+EA  L  KMV  
Sbjct: 542 IIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSC 601

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG--LSPTLVTYTVLIHAHAAR 606
           G +P  + + S++      G+  +   L + M  K   L   L +  +    H +R
Sbjct: 602 GHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACLCHMSR 657



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 181/357 (50%), Gaps = 4/357 (1%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V + M++ G  P     N ++  L        A  V  MM + G KP  VTYNT+L   C
Sbjct: 312 VLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLC 371

Query: 255 KEGEMQEALELLWEM---QGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKV 311
             G++ EA++L W++   +     P+  T N LI G  + G +  A  +   M+++GL+ 
Sbjct: 372 GAGKIHEAMDL-WKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQG 430

Query: 312 SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRF 371
           +  +YN +I GY     L+EAL L +  V  G +P   TY+++I GLCK   +S AR  F
Sbjct: 431 NIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLF 490

Query: 372 FEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY 431
            +M    + P +I YN L+   CR  ++ +A  LF E+R+ N    VV++N +IDG  + 
Sbjct: 491 CKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKA 550

Query: 432 GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAY 491
           GD++ A++L   M    ++PD +T++I++N   K+G L  A   + +M+  G  P    +
Sbjct: 551 GDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVF 610

Query: 492 TTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
            + + G    G+T +   L  +M  K    D    + ++  LC +    +  ++L K
Sbjct: 611 DSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACLCHMSRNLDVEKILPK 667



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 153/320 (47%), Gaps = 41/320 (12%)

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK--GLQPDRFAYTTQIAGELKL 501
           M  +G   +V    +++ G C+ G    A   F++M R    + PD   Y T + G  K 
Sbjct: 103 MTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKA 162

Query: 502 GDTSEAYRLQEEMLAKG-FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
              +EA  L E M   G   P+L+TY+VL+   CK G + E   LL +M  +G   D   
Sbjct: 163 KRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFV 222

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           Y+S+I A    GD+  GR+LF+ MLR+ +SP +VTY+ L+      GR   A     +M 
Sbjct: 223 YSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMT 282

Query: 621 VKGIRPNVI-----------------------------------TYNALINGLCRLRRID 645
            +G+RP+V+                                   TYN ++NGLC+  R+D
Sbjct: 283 ARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMD 342

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE--IEPDYCTHSA 703
            A+G+   M ++G  P+  TY  L+   C AG   EA+ L+K +L  +  ++PD  T + 
Sbjct: 343 DAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNN 402

Query: 704 LLLKQLDKDYKVHAVEYLES 723
            L++ L K+ +VH    + S
Sbjct: 403 -LIQGLCKEGRVHDAARIHS 421



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 133/275 (48%), Gaps = 14/275 (5%)

Query: 120 VKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLL 179
           VK D F    +++ L + G +  A  +  ++V + + G              +I   + L
Sbjct: 393 VKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQG--------------NIVTYNFL 438

Query: 180 LLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGI 239
           +  Y     + + L ++   + +G  P+    + +I  L        AR ++  M + GI
Sbjct: 439 IEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGI 498

Query: 240 KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
           +P+++ YN ++ S C+E  +++A  L  EM+    + + V++N++I G  + G+++ A+ 
Sbjct: 499 RPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKE 558

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
           L+ +M  + L   A +++ +I  +S+ G+L EA+ L E+MV+ G  P +  ++ L+ G  
Sbjct: 559 LLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYG 618

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
             G          +M  K+V+ D    +T+L   C
Sbjct: 619 LKGETEKIISLLHQMADKDVVLDSKLTSTILACLC 653


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 139/458 (30%), Positives = 245/458 (53%), Gaps = 6/458 (1%)

Query: 229 EVYRMMGEFGIK------PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYN 282
           E+   +G FG+       PSI+ ++ +L +  K  +    +    +M+  G S N  TYN
Sbjct: 58  ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
           +LI  F R   L  A  L+  M+KLG +    + N ++ G+     + +A+ L ++MV  
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           G  P   T+  LI+GL    + S+A      M+++   PD+++Y  ++ G C+ G+   A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
             L +++ +  +   VV Y+T+ID LC+Y   + A  L   M N+G+ P+VITY+ +++ 
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            C  G  S A    ++M+ + + P+   ++  I   +K G   +A +L EEM+ +   P+
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
           + TY+ L++G C L  L EA ++L  M+    +P+ +TY ++I+   +   + +G +LF 
Sbjct: 358 IFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFR 417

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
            M ++GL    VTYT LIH        + A M F +M   G+ PN++TYN L++GLC+  
Sbjct: 418 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 477

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
           ++ +A  +F  ++   + P+ YTY I+I   C AG W+
Sbjct: 478 KLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 142/448 (31%), Positives = 232/448 (51%), Gaps = 6/448 (1%)

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
           VL TG S + EL+ A GL   M +     S   ++ ++   ++       ++  E+M   
Sbjct: 49  VLRTGLS-DIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEIL 107

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           G++  L TYNILI   C+  R+S A     +M++    PDI++ N+LL G+C    I +A
Sbjct: 108 GISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 167

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
             L D++      P  VT+ TLI GL  +     A  L + M+ +G  PD++TY  +VNG
Sbjct: 168 VALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNG 227

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            CK G+  +A    N+M    ++ +   Y+T I    K     +A  L  EM  KG  P+
Sbjct: 228 LCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 287

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
           +ITY+ L+  LC  G   +A+ LL  M+     P+ +T++++I A ++ G L +   L+ 
Sbjct: 288 VITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYE 347

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
            M+++ + P + TY+ LI+      RL  A      M  K   PNV+TYN LING C+ +
Sbjct: 348 EMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAK 407

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
           R+D+   LF +M + G++ N  TYT LI+    A +   A  ++K+M+   + P+  T++
Sbjct: 408 RVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYN 467

Query: 703 ALLLKQLDKDYKVHAV----EYLESLTL 726
            +LL  L K+ K+       EYL+  T+
Sbjct: 468 -ILLDGLCKNGKLAKAMVVFEYLQRSTM 494



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 119/383 (31%), Positives = 201/383 (52%), Gaps = 6/383 (1%)

Query: 198 KMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG 257
           KM++ G  PD+   N ++           A  +   M E G KP  VT+ T++       
Sbjct: 138 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHN 197

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
           +  EA+ L+  M  RGC P+ VTY  ++ G  + G+ + A  L+  M    ++ +   Y+
Sbjct: 198 KASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYS 257

Query: 318 PII---CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
            +I   C Y  +    +ALNL  EM  +GV P + TY+ LI  LC +GR SDA     +M
Sbjct: 258 TVIDSLCKYRHED---DALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDM 314

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           + + + P++++++ L+  + + G + +A  L++E+  R++ P + TY++LI+G C    L
Sbjct: 315 IERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRL 374

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
             A+Q+ E MI +  LP+V+TY  ++NG CK   +    E F EM ++GL  +   YTT 
Sbjct: 375 GEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTL 434

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I G  +  D   A  + ++M++ G  P+++TYN+L+ GLCK G L +A  +   +     
Sbjct: 435 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 494

Query: 555 IPDHITYTSIIHASLEMGDLRRG 577
            PD  TY  +I    + G  + G
Sbjct: 495 EPDIYTYNIMIEGMCKAGKWKMG 517



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 197/389 (50%)

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M + G +P IVT N++L+ FC    + +A+ L+ +M   G  P+ VT+  LI G   + +
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNK 198

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
             +A  LI  M++ G +    +Y  ++ G  ++G    ALNL  +M    +   +  Y+ 
Sbjct: 199 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYST 258

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           +I  LCK+    DA + F EM  K V P++I+Y++L+   C  G   +A  L  ++  R 
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK 318

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           + P +VT++ LID   + G L  A++L E MI + I P++ TY+ ++NG C +  L  A+
Sbjct: 319 INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAK 378

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
           +    M+RK   P+   Y T I G  K     +   L  EM  +G   + +TY  L+HG 
Sbjct: 379 QMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGF 438

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
            +    + A  + ++MV  G  P+ +TY  ++    + G L +   +F  + R  + P +
Sbjct: 439 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDI 498

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVK 622
            TY ++I      G+ ++  +YF    +K
Sbjct: 499 YTYNIMIEGMCKAGKWKMGGIYFVASALK 527



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 180/323 (55%), Gaps = 3/323 (0%)

Query: 180 LLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGI 239
           L ++ K S   + + + ++M++ G  PD+     ++  L   G +  A  +   M    I
Sbjct: 193 LFLHNKAS---EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKI 249

Query: 240 KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
           + ++V Y+T++DS CK     +AL L  EM+ +G  PN +TY+ LI+     G    A  
Sbjct: 250 EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASR 309

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
           L+ DM++  +  +  +++ +I  + +KG LV+A  L EEM+ R + P + TY+ LI G C
Sbjct: 310 LLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFC 369

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
              R+ +A+     M+RK+ +P++++YNTL+ G+C++  + +   LF E+  R LV   V
Sbjct: 370 MLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTV 429

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
           TY TLI G  +  D + AQ + + M++ G+ P+++TY I+++G CK G L+ A   F  +
Sbjct: 430 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 489

Query: 480 LRKGLQPDRFAYTTQIAGELKLG 502
            R  ++PD + Y   I G  K G
Sbjct: 490 QRSTMEPDIYTYNIMIEGMCKAG 512


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 217/419 (51%)

Query: 279 VTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
           ++YN L+   +++G  +   G   DML  G   + ++Y  ++    +     EA ++   
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
           M  +G +P + +Y+ILI GLC+  +V +A     EM+     P++++Y +LL G C+ G 
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           + EA  LF  +  R   P  V YN LIDG  + GD+  A +L E M+ +G +P V TY  
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           +++G  + G     +  F +MLR+G  P+ F +   + G  K+GD  EA+RL  EM + G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
            PPD+++YN L+ G+C  G   EA  LLR+M+  G  PD ++Y  +I    + G L    
Sbjct: 258 CPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
            LF  + + GL P   +Y+ +I      G++  AF+ F +M   G  P+      L+ GL
Sbjct: 318 KLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGL 377

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           CR  R+ ++  LF  M +   +P    Y +L+ + C A    +   ++ E+ +R   PD
Sbjct: 378 CRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPD 436



 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 143/426 (33%), Positives = 229/426 (53%), Gaps = 6/426 (1%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL +  K    +     +N ML  G +P+      +++ L       +AR V+R M   G
Sbjct: 23  LLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQG 82

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
             P++ +Y+ ++   C+  ++ EA ELL EM   G  PN VTY  L++G  + G+L++A 
Sbjct: 83  CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAV 142

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L   M+  G       YN +I G+S+KG + EA  L EEM+ +G  PT+ TYN L+ G 
Sbjct: 143 DLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGF 202

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
            + G     +  F +MLR+  +P+I ++N LL G+C+ G++ EA  LF E+RS    P V
Sbjct: 203 SRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDV 262

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           V+YNTLI G+C  G    AQ+L   MI  G+ PD+++Y I+++G  K G L  A + F E
Sbjct: 263 VSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYE 322

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           + + GL+PD F+Y+T I    + G    A+ + ++M+A G  PD      LV GLC+   
Sbjct: 323 IPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGER 382

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD---LFNNMLRKGLSPTLVT 595
           L E+ EL + MV    +P    Y  +++   ++   +R  D   +F+ +  +G SP +  
Sbjct: 383 LTESCELFQAMVKFECVPLIPEYNLLMY---KLCKAKRSDDVCEIFHELTERGFSPDVEI 439

Query: 596 YTVLIH 601
             V++ 
Sbjct: 440 SKVILE 445



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 134/419 (31%), Positives = 211/419 (50%)

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           ++YN +L+   K G          +M   GC PN  TY  L+    +    E+AR + R 
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M   G   +  SY+ +I G      + EA  L  EM+  G  P + TY  L+ GLCK G+
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           + +A   F  M+ +   PD + YN L+ G+ + G++GEA+ LF+E+  +  +PTV TYN+
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           L+ G  R G+    Q L ++M+ QG +P++ T+  +++G CKMG++  A   F EM   G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
             PD  +Y T I G    G   EA RL  EM+  G  PD+++YN+L+ G  K G+L+ A 
Sbjct: 258 CPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
           +L  ++   G  PD  +Y++II      G +     +F +M+  G +P       L+   
Sbjct: 318 KLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGL 377

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
               RL  +   F  M      P +  YN L+  LC+ +R D    +F ++ E G  P+
Sbjct: 378 CRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPD 436



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 132/436 (30%), Positives = 212/436 (48%)

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
           N +++VL  +G        Y  M   G  P+  TY  +L S C+    +EA  +   M  
Sbjct: 21  NYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAA 80

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
           +GCSPN  +Y++LI G  R  ++++A  L+ +M+  G + +  +Y  ++ G  + G L E
Sbjct: 81  QGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKE 140

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
           A++L   MV RG  P    YN+LI G  K G + +A   F EML K  IP + +YN+LL 
Sbjct: 141 AVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLS 200

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
           G+ R G  G    LF ++  +  VP + T+N L+DG C+ GD+  A +L   M + G  P
Sbjct: 201 GFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPP 260

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           DV++Y  ++ G C  G    A+    EM+R G+ PD  +Y   I G  K G    A +L 
Sbjct: 261 DVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLF 320

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
            E+   G  PD  +Y+ ++  LC+ G +  A  + + M+ +G  PD      ++      
Sbjct: 321 YEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRG 380

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
             L    +LF  M++    P +  Y +L++      R +     F E+  +G  P+V   
Sbjct: 381 ERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEIS 440

Query: 632 NALINGLCRLRRIDQA 647
             ++  L R    D A
Sbjct: 441 KVILETLRRSDDKDAA 456



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 139/467 (29%), Positives = 234/467 (50%), Gaps = 17/467 (3%)

Query: 108 LRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGL 167
           + FF+W  +Q         +  +LE+L +SG             C +++G  + ++  G 
Sbjct: 1   MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGR------------CDHVYGTYNDMLAAG- 47

Query: 168 SSCV-SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
             CV +      LL    +    E+   VF  M   G  P+V + + +I  L       +
Sbjct: 48  --CVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDE 105

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A E+   M + G +P++VTY ++L   CK G+++EA++L   M  RGC P+GV YNVLI 
Sbjct: 106 AAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLID 165

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           GFS+ G++ +A  L  +ML+ G   +  +YN ++ G+S KG      +L ++M+ +G  P
Sbjct: 166 GFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVP 225

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
            + T+N L+ G CK G + +A   F EM      PD++SYNTL+ G C  G   EA  L 
Sbjct: 226 NIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLL 285

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
            E+    + P +V+YN LIDG  + G L+ A +L   +   G+ PD  +Y+ +++  C+ 
Sbjct: 286 REMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRA 345

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G +  A   F +M+  G  PD       + G  +    +E+  L + M+     P +  Y
Sbjct: 346 GKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEY 405

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           N+L++ LCK    ++  E+  ++   GF PD +  + +I  +L   D
Sbjct: 406 NLLMYKLCKAKRSDDVCEIFHELTERGFSPD-VEISKVILETLRRSD 451



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 122/411 (29%), Positives = 201/411 (48%)

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           SYN ++   ++ G          +M+  G  P   TY  L+  LC+  R  +AR  F  M
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
             +   P++ SY+ L+ G CR   + EA  L +E+      P VVTY +L+ GLC+ G L
Sbjct: 79  AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A  L   M+ +G  PD + Y ++++G  K G++  A   F EML KG  P  F Y + 
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           ++G  + G+      L ++ML +G  P++ T+N L+ G CK+G + EA+ L  +M   G 
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGC 258

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            PD ++Y ++I      G     + L   M+R G+ P +V+Y +LI  ++  G L+ A  
Sbjct: 259 PPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIK 318

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F E+   G+ P+  +Y+ +I+ LCR  ++  A+ +F DM   G  P+      L+   C
Sbjct: 319 LFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLC 378

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
                 E+  L++ M+  E  P    ++ L+ K           E    LT
Sbjct: 379 RGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELT 429



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 104/322 (32%), Positives = 168/322 (52%)

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
           +SYN LL    +SG     +  ++++ +   VP   TY  L+  LC+    E A+ +   
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           M  QG  P+V +Y+I++ G C+   +  A E  NEM+  G QP+   Y + ++G  K+G 
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
             EA  L   M+ +G PPD + YNVL+ G  K G + EA  L  +M+  G IP   TY S
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           ++      G+  R + LF +MLR+G  P + T+  L+      G +  A   F EM+  G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
             P+V++YN LI G+C   +  +A  L  +M   G+ P+  +Y ILI+    +G    A+
Sbjct: 258 CPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317

Query: 684 RLYKEMLDREIEPDYCTHSALL 705
           +L+ E+    +EPD  ++S ++
Sbjct: 318 KLFYEIPKSGLEPDAFSYSTII 339



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 134/260 (51%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL  +++K    +   +F  MLR G +P++   N ++      G  V+A  ++  M   G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
             P +V+YNT++   C +G+  EA  LL EM   G  P+ V+YN+LI G+S++G L+ A 
Sbjct: 258 CPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L  ++ K GL+  A SY+ II      G +  A  + ++M+  G AP  A    L+ GL
Sbjct: 318 KLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGL 377

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C+  R++++   F  M++   +P I  YN L+Y  C++    +   +F EL  R   P V
Sbjct: 378 CRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDV 437

Query: 419 VTYNTLIDGLCRYGDLEVAQ 438
                +++ L R  D + A+
Sbjct: 438 EISKVILETLRRSDDKDAAE 457


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 145/465 (31%), Positives = 233/465 (50%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
           FN ML     P   + N I+  L +N        +++     GI P + T + +++ FC 
Sbjct: 45  FNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCH 104

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
           +  +  A  +   +  RG  PN +T N LI G    GE+++A      ++  G ++   S
Sbjct: 105 QAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVS 164

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           Y  +I G  + G       L  ++    V P +  YN +I  LCK   + DA   + EM+
Sbjct: 165 YGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMI 224

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
            K + PD+++Y TL++G+C  G++ EAF L +E++ +N+ P V T+N LID L + G ++
Sbjct: 225 VKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMK 284

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            A+ L   M+   I PDV TY  +++G   +  +  A+  F  M ++G+ PD   YT  I
Sbjct: 285 EAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMI 344

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
            G  K     EA  L EEM  K   PD++TYN L+ GLCK   LE A  L ++M   G  
Sbjct: 345 NGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQ 404

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           PD  +YT ++    + G L   +++F  +L KG    +  YTVLI+     G  + A   
Sbjct: 405 PDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDL 464

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
            S+M+ KG  P+ +T++ +I  L      D+A  +  +M   G+L
Sbjct: 465 KSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGLL 509



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 132/452 (29%), Positives = 220/452 (48%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P    +N +L S          + L  + +  G +P+  T ++LI  F     +  A  +
Sbjct: 55  PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 114

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
             ++LK G   +A + N +I G   +G + +AL   +++V +G      +Y  LI GLCK
Sbjct: 115 FANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCK 174

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G          ++   +V PD++ YNT++   C++  +G+A  ++ E+  + + P VVT
Sbjct: 175 TGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 234

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y TLI G C  G L+ A  L   M  + I P+V T+ I+++   K G +  A+     M+
Sbjct: 235 YTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMM 294

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           +  ++PD F Y + I G   + +   A  +   M  +G  PD+  Y  +++GLCK   ++
Sbjct: 295 KACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVD 354

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA  L  +M     IPD +TY S+I    +   L R   L   M  +G+ P + +YT+L+
Sbjct: 355 EAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILL 414

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                 GRLE A   F  +  KG   NV  Y  LIN LC+    D+A  L   ME++G +
Sbjct: 415 DGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCM 474

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
           P+  T+ I+I          +A ++ +EM+ R
Sbjct: 475 PDAVTFDIIIRALFEKDENDKAEKILREMIAR 506



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 122/367 (33%), Positives = 204/367 (55%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +++ L   ++++  G   D  +   +I  L   G +     + R +    +KP +V YNT
Sbjct: 143 IKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNT 202

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++S CK   + +A ++  EM  +G SP+ VTY  LI GF   G L++A  L+ +M    
Sbjct: 203 IINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKN 262

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           +  +  ++N +I   S++G + EA  L   M+   + P + TYN LI G      V  A+
Sbjct: 263 INPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAK 322

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
           + F+ M ++ V PD+  Y  ++ G C++  + EA  LF+E++ +N++P +VTYN+LIDGL
Sbjct: 323 YVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGL 382

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+   LE A  L + M  QGI PDV +YTI+++G CK G L  A+E F  +L KG   + 
Sbjct: 383 CKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNV 442

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
            AYT  I    K G   EA  L+ +M  KG  PD +T+++++  L +    ++A ++LR+
Sbjct: 443 HAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILRE 502

Query: 549 MVGDGFI 555
           M+  G +
Sbjct: 503 MIARGLL 509



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 124/414 (29%), Positives = 214/414 (51%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
           L +L+  +  ++ +     VF  +L+ G  P+    N +IK L   G   KA   +  + 
Sbjct: 95  LSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLV 154

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
             G +   V+Y T+++  CK GE +    LL +++G    P+ V YN +I    +N  L 
Sbjct: 155 AQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLG 214

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
            A  +  +M+  G+     +Y  +I G+   G L EA +L  EM  + + P + T+NILI
Sbjct: 215 DACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILI 274

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
             L K G++ +A+     M++  + PD+ +YN+L+ GY     +  A  +F  +  R + 
Sbjct: 275 DALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVT 334

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P V  Y  +I+GLC+   ++ A  L E M ++ ++PD++TY  +++G CK  +L  A   
Sbjct: 335 PDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIAL 394

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
              M  +G+QPD ++YT  + G  K G   +A  + + +LAKG+  ++  Y VL++ LCK
Sbjct: 395 CKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCK 454

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
            G  +EA +L  KM   G +PD +T+  II A  E  +  +   +   M+ +GL
Sbjct: 455 AGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGL 508



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 128/430 (29%), Positives = 215/430 (50%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F +   NG+ PD+   + +I           A  V+  + + G  P+ +T NT++   C
Sbjct: 79  LFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLC 138

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
             GE+++AL    ++  +G   + V+Y  LI G  + GE +    L+R +    +K    
Sbjct: 139 FRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVV 198

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
            YN II    +  LL +A ++  EM+ +G++P + TY  LI+G C  G + +A     EM
Sbjct: 199 MYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEM 258

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
             KN+ P++ ++N L+    + G + EA +L   +    + P V TYN+LIDG     ++
Sbjct: 259 KLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEV 318

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A+ +  +M  +G+ PDV  YT M+NG CK   +  A   F EM  K + PD   Y + 
Sbjct: 319 KHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSL 378

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I G  K      A  L + M  +G  PD+ +Y +L+ GLCK G LE+A E+ ++++  G+
Sbjct: 379 IDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGY 438

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
             +   YT +I+   + G      DL + M  KG  P  VT+ ++I A   +   + A  
Sbjct: 439 HLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEK 498

Query: 615 YFSEMQVKGI 624
              EM  +G+
Sbjct: 499 ILREMIARGL 508



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 168/325 (51%)

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           P    +N +L     + +      LF +     + P + T + LI+  C    + +A  +
Sbjct: 55  PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 114

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
             N++ +G  P+ IT   ++ G C  G +  A  F ++++ +G Q D+ +Y T I G  K
Sbjct: 115 FANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCK 174

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
            G+T    RL  ++      PD++ YN +++ LCK   L +A ++  +M+  G  PD +T
Sbjct: 175 TGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 234

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           YT++IH    MG L+    L N M  K ++P + T+ +LI A +  G+++ A +  + M 
Sbjct: 235 YTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMM 294

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
              I+P+V TYN+LI+G   +  +  A  +F  M + G+ P+   YT +IN  C      
Sbjct: 295 KACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVD 354

Query: 681 EALRLYKEMLDREIEPDYCTHSALL 705
           EA+ L++EM  + + PD  T+++L+
Sbjct: 355 EAMSLFEEMKHKNMIPDIVTYNSLI 379



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 121/253 (47%), Gaps = 1/253 (0%)

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
           FN ML     P  F +   ++  +          L ++    G  PDL T ++L++  C 
Sbjct: 45  FNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCH 104

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
              +  A  +   ++  GF P+ IT  ++I      G++++     + ++ +G     V+
Sbjct: 105 QAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVS 164

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           Y  LI+     G  +       +++   ++P+V+ YN +IN LC+ + +  A  ++ +M 
Sbjct: 165 YGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMI 224

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKV 715
            +GI P+  TYT LI+  C  G+ +EA  L  EM  + I P+ CT + +L+  L K+ K+
Sbjct: 225 VKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFN-ILIDALSKEGKM 283

Query: 716 HAVEYLESLTLGA 728
              + L ++ + A
Sbjct: 284 KEAKILLAVMMKA 296


>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
 gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
          Length = 543

 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 132/418 (31%), Positives = 221/418 (52%), Gaps = 5/418 (1%)

Query: 257 GEMQEALELLWEMQGRGCSPNGVT---YNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           G++ +A  +L   +  G  P  V+    +V++ GF ++G ++ AR L+ +M + G++++A
Sbjct: 110 GQLADAAAILT--RALGSCPGSVSPLAASVVVDGFCKSGRVDDARALLDEMPRHGVRLNA 167

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
             YN ++  Y  +        L E M   G+  T+ TY IL+  L   G +S       E
Sbjct: 168 LCYNSLLDCYVRRKDDARVQELLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDE 227

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M  KNV  D+  Y  ++  YCR+GN+  A  +FDE     + P   TY  LI+G C+ G 
Sbjct: 228 MKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQ 287

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           +E A+ L  +M  +G+  + I +  M++G C+ G +  A +    M + G++ D + Y T
Sbjct: 288 MEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNT 347

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
              G  ++   +EA  L   M+ KG PP+ +TY  L+   CK G + EA  L R+M G G
Sbjct: 348 LACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKG 407

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
            +P  +TY  ++   ++ G +R        M +KGL P + TY  L+H H   G++++A 
Sbjct: 408 AMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVAL 467

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
             F EM+ +G  PNV+ Y ALI+GL +  R ++A+ L+ DM + G+ P+   Y+ L+ 
Sbjct: 468 KLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVG 525



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/414 (31%), Positives = 208/414 (50%)

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
           R +G      S +  + ++D FCK G + +A  LL EM   G   N + YN L+  + R 
Sbjct: 121 RALGSCPGSVSPLAASVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRR 180

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
            +  + + L+  M   G++ +  +Y  ++   S  G + +   + +EM  + VA  +  Y
Sbjct: 181 KDDARVQELLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLY 240

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
             +I   C+ G V  A   F E +   + P+  +Y  L+ G+C+ G +  A +L  +++ 
Sbjct: 241 TAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQG 300

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           R +    + +NT+IDG CR G ++ A ++K  M   GI  DV TY  +  G C++  ++ 
Sbjct: 301 RGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAE 360

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A+   + M+ KG+ P+   YTT I+   K GD  EA RL  EM  KG  P ++TYNV++ 
Sbjct: 361 AKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMD 420

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           G  K GS+ EA    ++M   G +PD  TY S++H     G +     LF  M  +G  P
Sbjct: 421 GYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEP 480

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
            +V YT LI   A  GR E AF  + +M   G+ P+   Y+AL+  L    R D
Sbjct: 481 NVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSLHTDNRKD 534



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 123/397 (30%), Positives = 201/397 (50%), Gaps = 37/397 (9%)

Query: 344 VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR-------- 395
           V+P  A+  +++ G CK GRV DAR    EM R  V  + + YN+LL  Y R        
Sbjct: 130 VSPLAAS--VVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQ 187

Query: 396 ---------------------------SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
                                      +G+I +   + DE++++N+   V  Y  +I+  
Sbjct: 188 ELLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAY 247

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           CR G++  A ++ +  +  GI P+  TY +++NG CK+G +  A     +M  +G+  ++
Sbjct: 248 CRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQ 307

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             + T I G  + G    A +++  M   G   D+ TYN L  GLC++  + EA  LL  
Sbjct: 308 IIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHI 367

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M+  G  P+++TYT++I    + GD+   R LF  M  KG  P++VTY V++  +  +G 
Sbjct: 368 MIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGS 427

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           +  A  +  EM+ KG+ P+V TY +L++G C   ++D A  LF +M+  G  PN   YT 
Sbjct: 428 IREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTA 487

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           LI+     G  +EA +LY +ML   + PD   +SAL+
Sbjct: 488 LISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALV 524



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 113/355 (31%), Positives = 190/355 (53%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL  Y ++    +   +   M   G+   V     ++  L   G   K   V   M    
Sbjct: 173 LLDCYVRRKDDARVQELLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKN 232

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           +   +  Y  +++++C+ G ++ A E+  E  G G  PN  TY VLI GF + G++E A 
Sbjct: 233 VAGDVYLYTAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAE 292

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L+ DM   G+  +   +N +I GY  +G++  AL ++  M   G+   + TYN L  GL
Sbjct: 293 MLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGL 352

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C+  R+++A+     M+ K V P+ ++Y TL+  +C+ G++ EA  LF E+  +  +P+V
Sbjct: 353 CRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSV 412

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           VTYN ++DG  + G +  A++ ++ M  +G++PDV TY  +V+G C  G + +A + F E
Sbjct: 413 VTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEE 472

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
           M  +G +P+  AYT  I+G  K G + EA++L ++ML  G  PD   Y+ LV  L
Sbjct: 473 MKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSL 527



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 200/403 (49%), Gaps = 3/403 (0%)

Query: 166 GLSSC---VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG 222
            L SC   VS     +++  + K   V+    + ++M R+G+  +    N ++       
Sbjct: 122 ALGSCPGSVSPLAASVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRK 181

Query: 223 FSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYN 282
              + +E+  +M   GI+ ++ TY  ++DS    G++ +   ++ EM+ +  + +   Y 
Sbjct: 182 DDARVQELLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYT 241

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
            +I  + R G + +A  +  + +  G++ +  +Y  +I G+ + G +  A  L  +M  R
Sbjct: 242 AVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGR 301

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           GV      +N +I G C+ G V +A      M +  +  D+ +YNTL  G CR   + EA
Sbjct: 302 GVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEA 361

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
             L   +  + + P  VTY TLI   C+ GD+  A++L   M  +G +P V+TY +M++G
Sbjct: 362 KTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDG 421

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
             K G++  A  F  EM +KGL PD + Y + + G    G    A +L EEM  +G  P+
Sbjct: 422 YIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPN 481

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           ++ Y  L+ GL K G  EEA +L   M+  G  PD   Y++++
Sbjct: 482 VVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALV 524



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 77/164 (46%), Gaps = 9/164 (5%)

Query: 129 TILEILIESGLLRS--AYWVVETVVC-----VNMHGILDVLIGGGLSSCVSIKILDLLLL 181
           T+L I+IE G+  +   Y  + ++ C     V    +   + G G  +  S+   ++++ 
Sbjct: 363 TLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKG--AMPSVVTYNVMMD 420

Query: 182 IYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKP 241
            Y KK  + +      +M + GL+PDV     ++     NG    A +++  M   G +P
Sbjct: 421 GYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEP 480

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           ++V Y  ++    KEG  +EA +L  +M   G +P+   Y+ L+
Sbjct: 481 NVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALV 524


>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
 gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
          Length = 651

 Score =  245 bits (625), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 159/563 (28%), Positives = 267/563 (47%), Gaps = 41/563 (7%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +L+  ++    ++  + +  +M  NG   +      ++K L D G  V+A E +R M + 
Sbjct: 14  ILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAK- 72

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
              P ++TY  ++ + CK G+  EA  +L EM  RGC+P+ VT++ LI G  + G  EQA
Sbjct: 73  DCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQA 132

Query: 298 RGLIRDMLKLGLK-----------------------------VSAHSYNP-------IIC 321
             ++ D+++ G+                              V A  + P       +I 
Sbjct: 133 FRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVIN 192

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           G+ +   L  A  L E M+ +G  P + T+ ILI GLCK  RV +A+    +M+     P
Sbjct: 193 GFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSP 252

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           ++++Y+T++ G C+ G + +A+ LF  +  RN  P VVT+N LIDGLC+   +E A+QL 
Sbjct: 253 NVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLY 312

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ-PDRFAYTTQIAGELK 500
             M   G  PD+ITY  +++G CK   +  A + F  +   G+   +   Y+T   G   
Sbjct: 313 HRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAA 372

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
           LG  ++A R+   ++ KGF PDL TY  L+   CK     E  EL+ +M   GF P   T
Sbjct: 373 LGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNT 432

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
            ++++    E     R   LF++M  +G +   + Y +++   A   +   A     ++ 
Sbjct: 433 LSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVI 492

Query: 621 VKGIR---PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
            K  R   P+    +AL+  LC++ R D A  L   M E G      +Y  L++      
Sbjct: 493 DKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQ 552

Query: 678 NWQEALRLYKEMLDREIEPDYCT 700
            W EA ++++ M+     P+  T
Sbjct: 553 RWDEATQVFEAMVSAGPAPEIST 575



 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 129/395 (32%), Positives = 217/395 (54%), Gaps = 3/395 (0%)

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +Y  +I G+S  G L  A+ L EEM + G       +  L+ GLC  GRV +A   F  M
Sbjct: 11  TYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM 70

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
             K+  PD+++Y  L++  C++G   EA  +  E+ +R   P  VT++TLIDGLC++G  
Sbjct: 71  -AKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSE 129

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSC-KMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           E A ++ E++I +G+      +  ++   C K  ++ +A +    ++ KG  P    +  
Sbjct: 130 EQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNL 189

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            I G  K  D   AY+L E M+ KG  P++ T+ +L+ GLCK   + EA +LL KMV  G
Sbjct: 190 VINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGG 249

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
             P+ +TY+++I+   + G +    +LF  M R+   P +VT+ +LI       R+E A 
Sbjct: 250 CSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEAR 309

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI-LPNKYTYTILINE 672
             +  M+  G  P++ITYN+LI+GLC+  ++D+A+ LF  + E G+   N  TY+ L + 
Sbjct: 310 QLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHG 369

Query: 673 NCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLK 707
               G   +A R++  ++D+   PD  T+++L+L+
Sbjct: 370 YAALGRMADACRIFSMLVDKGFSPDLATYTSLILE 404



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 141/467 (30%), Positives = 233/467 (49%), Gaps = 8/467 (1%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P+  TY  ++  F   G++  A++LL EM+  G   N V +  L+ G    G + +A   
Sbjct: 7   PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
            R M K        +Y  ++    + G   EA  +  EM+ RG AP   T++ LI GLCK
Sbjct: 67  FRAMAK-DCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK 125

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE-AFLLFDELRSRNLVPTVV 419
           +G    A     +++++ +     ++ T++   C   N  E A  +   + ++   PTV+
Sbjct: 126 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVL 185

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
            +N +I+G C+  DL+ A +L E MI +G +P+V T+TI++ G CK   +  A++   +M
Sbjct: 186 MFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKM 245

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
           +  G  P+   Y+T I G  K G   +AY L + M  +  PP+++T+N+L+ GLCK   +
Sbjct: 246 VTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRI 305

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT-LVTYTV 598
           EEA +L  +M   G  PD ITY S+I    +   +     LF  +   G+S    VTY+ 
Sbjct: 306 EEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYST 365

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           L H +AA GR+  A   FS +  KG  P++ TY +LI   C+  R  +   L  +M  +G
Sbjct: 366 LFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKG 425

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             P   T + ++       + + A++L+  M  R      CT  AL+
Sbjct: 426 FPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARG-----CTDDALI 467



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 136/457 (29%), Positives = 240/457 (52%), Gaps = 3/457 (0%)

Query: 271 GRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLV 330
            R C PN  TY +LI GFS  G+L+ A  L+ +M   G + +A  +  ++ G  + G +V
Sbjct: 2   ARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVV 61

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
           EAL     M  +  AP + TY  L++ LCK G+  +A+    EM+ +   PD ++++TL+
Sbjct: 62  EALEHFRAMA-KDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLI 120

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC-RYGDLEVAQQLKENMINQGI 449
            G C+ G+  +AF + +++  R +  +   + T+I  LC +Y  +E+A ++   +I +G 
Sbjct: 121 DGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGF 180

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
            P V+ + +++NG CK  +L  A +    M+ KG  P+ F +T  I G  K     EA +
Sbjct: 181 TPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQ 240

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           L E+M+  G  P+++TY+ +++GLCK G +++A EL + M      P+ +T+  +I    
Sbjct: 241 LLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLC 300

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRP-NV 628
           +   +   R L++ M   G +P ++TY  LI       +++ AF  F  +   G+   N 
Sbjct: 301 KAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANA 360

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
           +TY+ L +G   L R+  A  +F  + ++G  P+  TYT LI E C      E + L +E
Sbjct: 361 VTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEE 420

Query: 689 MLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
           M  +   P   T SA+L    + ++   A++  +S+ 
Sbjct: 421 MASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMA 457



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 144/520 (27%), Positives = 240/520 (46%), Gaps = 40/520 (7%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK-AREVYRMMGEFGIKPSIVTYNT 248
           EQ   V   +++ G+         II+ L +   SV+ A +V  ++   G  P+++ +N 
Sbjct: 130 EQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNL 189

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++ FCK  ++  A +LL  M  +GC PN  T+ +LITG  +   + +A+ L+  M+  G
Sbjct: 190 VINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGG 249

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
              +  +Y+ +I G  ++G + +A  L + M  R   P + T+NILI GLCK  R+ +AR
Sbjct: 250 CSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEAR 309

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL-VPTVVTYNTLIDG 427
             +  M      PDII+YN+L+ G C+S  + EAF LF  +    +     VTY+TL  G
Sbjct: 310 QLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHG 369

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
               G +  A ++   ++++G  PD+ TYT ++   CK        E   EM  KG  P 
Sbjct: 370 YAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPR 429

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG--------------- 532
               +  + G  +   T  A +L + M A+G   D + YN++V G               
Sbjct: 430 VNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLE 489

Query: 533 -----------------------LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
                                  LC++G  ++A +LL KM   GF     +Y  ++    
Sbjct: 490 QVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLS 549

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
            +        +F  M+  G +P + T  V+I    +  +++ A+     M   G  P++ 
Sbjct: 550 RLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIE 609

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL 669
           T N LI G C+  R D A  L  +M E G+ PN  T+ +L
Sbjct: 610 TCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 649



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 114/244 (46%), Gaps = 2/244 (0%)

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           P++F Y   I G    GD   A +L EEM + GF  + + +  L+ GLC  G + EA E 
Sbjct: 7   PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
            R M  D   PD +TYT+++HA  + G     + +   M+ +G +P  VT++ LI     
Sbjct: 67  FRAMAKD-CAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK 125

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLC-RLRRIDQAYGLFIDMEEEGILPNKY 664
            G  E AF    ++  +G+  +   +  +I  LC +   ++ A  +   +  +G  P   
Sbjct: 126 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVL 185

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
            + ++IN  C A +   A +L + M+++   P+  T + L+      +    A + LE +
Sbjct: 186 MFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKM 245

Query: 725 TLGA 728
             G 
Sbjct: 246 VTGG 249



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 125/270 (46%), Gaps = 5/270 (1%)

Query: 158 ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
           I  +L+  G S    +     L+L Y K S   + + +  +M   G  P V   + ++  
Sbjct: 382 IFSMLVDKGFSP--DLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGG 439

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM---QGRGC 274
           L +   + +A +++  M   G     + YN +++   +  +  +AL +L ++   + R  
Sbjct: 440 LFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKF 499

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
           +P+    + L+    + G  + A+ L+  M + G   +  SYN ++ G S      EA  
Sbjct: 500 NPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQ 559

Query: 335 LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
           + E MV+ G AP ++T N++I  LC   +V DA      M +    PDI + NTL+ GYC
Sbjct: 560 VFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYC 619

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
           +SG    A  L +E+    L P   T++ L
Sbjct: 620 KSGRADLARKLLEEMTEAGLEPNDTTHDLL 649



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 63/127 (49%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           + +KM   G    V + N ++  L       +A +V+  M   G  P I T N ++   C
Sbjct: 525 LLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLC 584

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
              ++ +A EL+  M   GC P+  T N LI G+ ++G  + AR L+ +M + GL+ +  
Sbjct: 585 SAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDT 644

Query: 315 SYNPIIC 321
           +++ + C
Sbjct: 645 THDLLEC 651


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  245 bits (625), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 143/439 (32%), Positives = 233/439 (53%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           ++  L +F  M++   LP + + +R++  +           ++  M   GI  ++ T N 
Sbjct: 62  LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +L+ FC+  ++  AL  L +M   G  P+ VT+  L+ GF R   +  A  +   M+++G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMG 181

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            + +   YN II G  +   +  AL+L   M   G+ P   TYN LI GLC  GR  DA 
Sbjct: 182 YEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDAT 241

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
                M ++ + PD+ ++N L+    + G I EA  L++E+  R+L P +VTY+ LI GL
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGL 301

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C Y  L+ A+Q+   M+++G  PDV+TY+I++NG CK   +    + F EM ++G+  + 
Sbjct: 302 CMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             YT  I G  + G  + A  + + M+  G PP++ITYNVL+HGLC  G +E+A  +L  
Sbjct: 362 VTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILAD 421

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M   G   D +TY  II    + G++    DL+ ++  KGL+P + TYT ++     +G 
Sbjct: 422 MQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGL 481

Query: 609 LELAFMYFSEMQVKGIRPN 627
              A   F +M+  GI PN
Sbjct: 482 RGEADALFRKMKEDGILPN 500



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/383 (34%), Positives = 208/383 (54%)

Query: 335 LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
           L E+M   G+   L T NIL+   C+  ++S A     +M++    PDI+++ +LL G+C
Sbjct: 103 LWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFC 162

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
           R   I +A  +FD +      P VV YNT+IDGLC+   ++ A  L   M   GI PD +
Sbjct: 163 RGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAV 222

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
           TY  +++G C  G    A    + M ++ + PD F +   I   +K G  SEA  L EEM
Sbjct: 223 TYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEM 282

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
           + +   PD++TY++L++GLC    L+EA ++   MV  G  PD +TY+ +I+   +   +
Sbjct: 283 IRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKV 342

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
             G  LF  M ++G+    VTYTVLI  +   G+L +A   F  M   G+ PN+ITYN L
Sbjct: 343 EHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVL 402

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           ++GLC   +I++A  +  DM++ G+  +  TY I+I   C AG   +A  LY  +  + +
Sbjct: 403 LHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGL 462

Query: 695 EPDYCTHSALLLKQLDKDYKVHA 717
            PD  T++A++L    K  +  A
Sbjct: 463 TPDIWTYTAMMLGLYKKGLRGEA 485



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 129/423 (30%), Positives = 216/423 (51%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PSI  ++ +L +  K  +    + L  +MQ  G   N  T N+L+  F R  +L  A   
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  M+KLG +    ++  ++ G+     + +AL + + MV  G  P +  YN +I GLCK
Sbjct: 139 LGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCK 198

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
             +V +A      M    + PD ++YN+L+ G C SG   +A  +   +  R + P V T
Sbjct: 199 SKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFT 258

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           +N LID   + G +  A++L E MI + + PD++TY++++ G C    L  A + F  M+
Sbjct: 259 FNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMV 318

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            KG  PD   Y+  I G  K        +L  EM  +G   + +TY VL+ G C+ G L 
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLN 378

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
            A E+ + MV  G  P+ ITY  ++H   + G + +   +  +M + G+   +VTY ++I
Sbjct: 379 VAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIII 438

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                 G +  A+  +  + +KG+ P++ TY A++ GL +     +A  LF  M+E+GIL
Sbjct: 439 RGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGIL 498

Query: 661 PNK 663
           PN+
Sbjct: 499 PNE 501



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/386 (30%), Positives = 189/386 (48%), Gaps = 45/386 (11%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS-----VKAREVY 231
           ++LL  + + S +   L    KM++ G  PD+     ++     NGF        A  ++
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLL-----NGFCRGDRIYDALYMF 174

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M E G +P++V YNT++D  CK  ++  AL+LL  M+  G  P+ VTYN LI+G   +
Sbjct: 175 DRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNS 234

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G  + A  ++  M K  +     ++N +I    ++G + EA  L EEM+ R + P + TY
Sbjct: 235 GRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTY 294

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           ++LIYGLC + R+ +A   F  M+ K   PD+++Y+ L+ GYC+S  +     LF E+  
Sbjct: 295 SLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQ 354

Query: 412 RNLV-----------------------------------PTVVTYNTLIDGLCRYGDLEV 436
           R +V                                   P ++TYN L+ GLC  G +E 
Sbjct: 355 RGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEK 414

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
           A  +  +M   G+  D++TY I++ G CK G ++ A + +  +  KGL PD + YT  + 
Sbjct: 415 ALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMML 474

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPD 522
           G  K G   EA  L  +M   G  P+
Sbjct: 475 GLYKKGLRGEADALFRKMKEDGILPN 500



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 110/391 (28%), Positives = 185/391 (47%), Gaps = 20/391 (5%)

Query: 335 LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV--------------- 379
           L   ++ +G + T  + +  I GLC   R       + EMLR  +               
Sbjct: 13  LHRNLLEKGNSGTSPSSSFSICGLCFSRRAYSGGSDYREMLRNGIRYMKLDDSLDLFFHM 72

Query: 380 -----IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
                +P I  ++ LL    +         L+++++   +   + T N L++  CR   L
Sbjct: 73  VQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQL 132

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
            +A      M+  G  PD++T+  ++NG C+   +  A   F+ M+  G +P+   Y T 
Sbjct: 133 SLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTI 192

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I G  K      A  L   M   G  PD +TYN L+ GLC  G  ++A  ++  M     
Sbjct: 193 IDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREI 252

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            PD  T+ ++I A ++ G +    +L+  M+R+ L P +VTY++LI+      RL+ A  
Sbjct: 253 YPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQ 312

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F  M  KG  P+V+TY+ LING C+ ++++    LF +M + G++ N  TYT+LI   C
Sbjct: 313 MFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYC 372

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            AG    A  ++K M+   + P+  T++ LL
Sbjct: 373 RAGKLNVAEEIFKWMVFCGVPPNIITYNVLL 403


>gi|222616383|gb|EEE52515.1| hypothetical protein OsJ_34721 [Oryza sativa Japonica Group]
          Length = 820

 Score =  245 bits (625), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 159/567 (28%), Positives = 272/567 (47%), Gaps = 51/567 (8%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V++ L V+ +M   G+ PD +  +  +  L D G    A  + + +    +    + YN 
Sbjct: 240 VDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAMAYNM 299

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++D  CKE  + EA +LL     +G +P+   Y+ LI  + + G L  A      M+  G
Sbjct: 300 VMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHG 359

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           ++ + H  + ++  + + G+  EA+    +    G+      YNI +   CK G +++A 
Sbjct: 360 IETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAV 419

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               EM    + PD I Y  L+ GYC  G +  A  +F+E+   N+ P +VTYN L  G 
Sbjct: 420 KLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGF 479

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G +     L + M +QG+ P+ +TY I + G C+ GNLS A   FN +  KG+    
Sbjct: 480 CKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIE 539

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             Y++ + G L  G T  AY L   +  +G   D  + + L++ LC++G+++ A+ + + 
Sbjct: 540 VMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKI 599

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M+    +PD I+Y+ +I    + GD+ +    F++M+++GLS  ++ YT+L++ +   GR
Sbjct: 600 MLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGR 659

Query: 609 LELAFMYFSEMQVKGIRPNVIT-------------------------------------- 630
           L+ A   F +M   GI+P+VI                                       
Sbjct: 660 LQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLS 719

Query: 631 -------------YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
                        Y  LI+G C+   + +A  LF +M ++G+ P+ Y YT LIN  C+ G
Sbjct: 720 SMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQG 779

Query: 678 NWQEALRLYKEMLDREIEPDYCTHSAL 704
              +A  L +EM+D+ IEPD  T S L
Sbjct: 780 EISKAEDLLQEMIDKGIEPDELTFSVL 806



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 153/574 (26%), Positives = 271/574 (47%), Gaps = 26/574 (4%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           S+   +LLL    +    E  L  +N+M    L PDV     + + L       +A +V+
Sbjct: 188 SVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQVW 247

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M E G+KP    Y++ L   C  G+   A  +L E+         + YN+++ G  + 
Sbjct: 248 AEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAMAYNMVMDGLCKE 307

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
             L++A  L+ +  + G     + Y+ +I  Y + G L+ A++  E MV+ G+       
Sbjct: 308 MRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIV 367

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           + L+    K G  S+A   F +     +  D + YN  +  YC++GN+ EA  L +E++ 
Sbjct: 368 SYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKY 427

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
             L P  + Y  LI G C  G+++ AQQ+ E M+   I PD++TY I+ +G CK G +  
Sbjct: 428 GGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVME 487

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
             +  + M  +GL+P+   Y   I G  + G+ SEA  L   +  KG     + Y+ +V 
Sbjct: 488 VFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVC 547

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           G    G  + A  L  ++   G + DH + + +I+    +G+++   ++   ML   + P
Sbjct: 548 GYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVP 607

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
            +++Y+ LI  +   G ++ A ++F +M  +G+  +VI Y  L+NG C+  R+ +A  LF
Sbjct: 608 DVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLF 667

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEAL---------------------RLYKEML 690
           + M   GI P+   YT+L++     G+ +E L                     +L   M 
Sbjct: 668 VQMTNLGIKPDVIAYTVLLD-----GHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMK 722

Query: 691 DREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           D +IEPD   ++ L+  +   +Y V A E  + +
Sbjct: 723 DMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEM 756



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 141/467 (30%), Positives = 246/467 (52%), Gaps = 20/467 (4%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
           +  M+ +G+  +    + +++  R  G + +A   +    + G+    V YN  +D++CK
Sbjct: 352 YEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCK 411

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
            G M EA++LL EM+  G +P+ + Y  LI+G+   GE++ A+ +  +MLK  ++    +
Sbjct: 412 NGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVT 471

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           YN +  G+ + GL++E  +L + M  +G+ P   TY I I G C+ G +S+A   F  + 
Sbjct: 472 YNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVE 531

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL-RSRNLVPTVVTYNTLIDGLCRYGDL 434
            K +    + Y++++ GY  SG    A++LF  + R  NLV    + + LI+ LCR G++
Sbjct: 532 EKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDH-FSCSKLINDLCRVGNV 590

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A  + + M+   ++PDVI+Y+ +++  C+ G++  A  +F++M+++GL  D   YT  
Sbjct: 591 QGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTIL 650

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA------------ 542
           + G  K G   EA +L  +M   G  PD+I Y VL+ G  K  +L++             
Sbjct: 651 MNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLK-ETLQQGWEGIAKERRSFL 709

Query: 543 -----NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
                N+LL  M      PD   YT +I    +   L   R+LF+ ML+KGL+P    YT
Sbjct: 710 LRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYT 769

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRI 644
            LI+ + ++G +  A     EM  KGI P+ +T++ L     R R+I
Sbjct: 770 ALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVLNQSSLRSRKI 816



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/441 (27%), Positives = 202/441 (45%), Gaps = 35/441 (7%)

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
           L   + +LG+  S  ++N ++   +E G     L    EM    + P + T+ I+   L 
Sbjct: 176 LFSGICRLGVVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLF 235

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
           +  +V +A   + EM    V PD   Y++ L G C  G    A+++  E+    +    +
Sbjct: 236 QAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAM 295

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
            YN ++DGLC+   L+ A++L EN   QG  PDV  Y+ ++   CKMGNL  A + +  M
Sbjct: 296 AYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAM 355

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
           +  G++ +    +  +    KLG TSEA     +    G   D + YN+ +   CK G++
Sbjct: 356 VSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNM 415

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
            EA +LL +M   G  PD I YT +I      G+++  + +F  ML+  + P +VTY +L
Sbjct: 416 NEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNIL 475

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRI--------------- 644
                  G +   F     M  +G+ PN +TY   I G CR   +               
Sbjct: 476 ASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGI 535

Query: 645 --------------------DQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
                               D AY LF+ +  +G L + ++ + LIN+ C  GN Q A  
Sbjct: 536 DHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASN 595

Query: 685 LYKEMLDREIEPDYCTHSALL 705
           + K ML+ ++ PD  ++S L+
Sbjct: 596 VCKIMLEHDVVPDVISYSKLI 616



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 161/382 (42%), Gaps = 35/382 (9%)

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
           F  + R  V+P + ++N LL     +G        ++E++   L P V T+  +   L +
Sbjct: 177 FSGICRLGVVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQ 236

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
              ++ A Q+   M   G+ PD   Y+  + G C  G   +A     E+ R+ +  +  A
Sbjct: 237 AKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAMA 296

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           Y   + G  K     EA +L E    +G  PD+  Y+ L+   CK+G+L  A +    MV
Sbjct: 297 YNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMV 356

Query: 551 GDG---------------------------FIP--------DHITYTSIIHASLEMGDLR 575
             G                           F+         D + Y   +    + G++ 
Sbjct: 357 SHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMN 416

Query: 576 RGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALI 635
               L N M   GL+P  + YT LI  +  +G ++ A   F EM    I P+++TYN L 
Sbjct: 417 EAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILA 476

Query: 636 NGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIE 695
           +G C+   + + + L   M ++G+ PN  TY I I   C  GN  EA  L+  + ++ I+
Sbjct: 477 SGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGID 536

Query: 696 PDYCTHSALLLKQLDKDYKVHA 717
                +S+++   L   +  HA
Sbjct: 537 HIEVMYSSMVCGYLLSGWTDHA 558



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/173 (20%), Positives = 78/173 (45%)

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
           G +P   T+  ++    E G+       +N M    L+P + T+ ++  +     +++ A
Sbjct: 184 GVVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEA 243

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
              ++EM   G++P+   Y++ + GLC   + D AY +  ++  E +      Y ++++ 
Sbjct: 244 LQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAMAYNMVMDG 303

Query: 673 NCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
            C      EA +L +    +   PD   +S L+         ++AV++ E++ 
Sbjct: 304 LCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMV 356


>gi|115444031|ref|NP_001045795.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|41052573|dbj|BAD07755.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113535326|dbj|BAF07709.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|125537962|gb|EAY84357.1| hypothetical protein OsI_05732 [Oryza sativa Indica Group]
 gi|125580699|gb|EAZ21630.1| hypothetical protein OsJ_05259 [Oryza sativa Japonica Group]
          Length = 871

 Score =  245 bits (625), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 150/486 (30%), Positives = 242/486 (49%), Gaps = 20/486 (4%)

Query: 211 CNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQ 270
           CN ++      G   +A  +   M + G+ P++VT+N  + + CK G + +A  +  +MQ
Sbjct: 215 CNTVVAGFCREGQVDEAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQ 274

Query: 271 G---RGCS-PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEK 326
               RG   P+ VT++V+++GF   G +++AR L+  M   G      SYN  + G    
Sbjct: 275 EKWERGLPRPDQVTFDVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRN 334

Query: 327 GLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI-PDIIS 385
           G++ EA  L  EM   GV P   TYNI++ GLCK G+  D R +  + ++  V+ PD+++
Sbjct: 335 GMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFDVR-KVEDFVKSGVMTPDVVT 393

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           Y +LL+ YC  GN   A  + DE+  +   P   TYN L+  L + G +  A++L E M 
Sbjct: 394 YTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMS 453

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG-LQPDRFAYTTQIAGELKLGDT 504
            +G   D  +  I+++G C+   L MA +  + M  +G L   R  Y+            
Sbjct: 454 EKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSL-------- 505

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
                L +   +K   PD ITY+ LV  LCK G  +EA + L +M+G    PD + Y + 
Sbjct: 506 -----LTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTF 560

Query: 565 IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
           IH   + G       +  +M +KG  P+  TY +LI     +   +      SEM+ KGI
Sbjct: 561 IHGYCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGI 620

Query: 625 RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
            PNV+TYN+LI   C    +++A  L  +M +  I+PN  ++ +LI   C   ++  A R
Sbjct: 621 CPNVMTYNSLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQR 680

Query: 685 LYKEML 690
           ++   L
Sbjct: 681 VFDASL 686



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 165/573 (28%), Positives = 272/573 (47%), Gaps = 38/573 (6%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           + + LLL   +++  +    ++  +L +G  PDV   N +++ L   G    AR V+  M
Sbjct: 117 VYNRLLLAALQEARFDLVESLYKDLLLSGAAPDVFTRNILLQALCAAGRMELARRVFDAM 176

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
            E     +  ++  +   +C+ G   +AL +L  M     + N V  N ++ GF R G++
Sbjct: 177 PE----RNEFSFGILARGYCRAGRSMDALGVLDSMP----TMNLVVCNTVVAGFCREGQV 228

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA---LNLEEEMVTRGVA-PTLAT 350
           ++A  L+  M   GL  +  ++N  I    + G +++A    N  +E   RG+  P   T
Sbjct: 229 DEAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVT 288

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           +++++ G C+ G V +AR     M     +  + SYN  L G  R+G +GEA  L  E+ 
Sbjct: 289 FDVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMA 348

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL-PDVITYTIMVNGSCKMGNL 469
              + P   TYN ++DGLC+ G     +++ E+ +  G++ PDV+TYT +++  C  GN 
Sbjct: 349 HEGVQPNSYTYNIIVDGLCKEGKAFDVRKV-EDFVKSGVMTPDVVTYTSLLHAYCSEGNA 407

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
           + A    +EM +KG  P+ F Y   +    K G  +EA RL E M  KG+  D  + N++
Sbjct: 408 AAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNII 467

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFI-----------------------PDHITYTSIIH 566
           + GLC+   L+ A +++  M  +G +                       PD ITY++++ 
Sbjct: 468 IDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLVS 527

Query: 567 ASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRP 626
           A  + G     +     M+ K +SP  V Y   IH +   G+  LA     +M+ KG +P
Sbjct: 528 ALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKP 587

Query: 627 NVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLY 686
           +  TYN LI G       D+   L  +M+ +GI PN  TY  LI   C  G   +A+ L 
Sbjct: 588 STRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAMPLL 647

Query: 687 KEMLDREIEPDYCTHSALLLKQLDKDYKVHAVE 719
            EML  EI P+  T   LL+K   K     A +
Sbjct: 648 DEMLQNEIVPNI-TSFELLIKAFCKTSDFSAAQ 679



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 137/556 (24%), Positives = 241/556 (43%), Gaps = 49/556 (8%)

Query: 95  RVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVN 154
           R+ N ++EK         W    P  + D+  F  +L    E+G++  A  +V+ + C  
Sbjct: 268 RIFNDMQEK---------WERGLP--RPDQVTFDVMLSGFCEAGMVDEARVLVDIMRC-- 314

Query: 155 MHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRI 214
                    GG L     ++  +  L    +  MV +   +  +M   G+ P+    N I
Sbjct: 315 ---------GGFLRR---VESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSYTYNII 362

Query: 215 IKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGC 274
           +  L   G +   R+V   +    + P +VTY ++L ++C EG    A  +L EM  +GC
Sbjct: 363 VDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGC 422

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
           +PN  TYNVL+    + G + +A  L+  M + G  +   S N II G      L  A++
Sbjct: 423 APNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMD 482

Query: 335 LEEEMVTRG-----------------------VAPTLATYNILIYGLCKWGRVSDARHRF 371
           + + M   G                         P   TY+ L+  LCK GR  +A+ + 
Sbjct: 483 IVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKL 542

Query: 372 FEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY 431
            EM+ K++ PD + Y+T ++GYC+ G    A  +  ++  +   P+  TYN LI G    
Sbjct: 543 LEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREK 602

Query: 432 GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAY 491
            + +   +L   M  +GI P+V+TY  ++   C+ G ++ A    +EML+  + P+  ++
Sbjct: 603 HNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSF 662

Query: 492 TTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
              I    K  D S A R+ +  L+     +++ Y+++   L   G   EA  +L  ++ 
Sbjct: 663 ELLIKAFCKTSDFSAAQRVFDASLSTCGQKEVL-YSLMCTQLSTYGRWLEAMNILETVLE 721

Query: 552 DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLEL 611
                    Y  II    ++ ++  G  L   ++ KG S     +  +I A + RG+ + 
Sbjct: 722 LRISIHRFPYKQIIEGLCKVDEVDHGHRLLKLLMVKGYSFDPAAFMPVIDALSERGKKQH 781

Query: 612 AFMYFSEMQVKGIRPN 627
             M   +M     R N
Sbjct: 782 VDMLSQKMMEMAERDN 797


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  245 bits (625), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 149/429 (34%), Positives = 214/429 (49%), Gaps = 41/429 (9%)

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
            T+N ML   C  G+   ALELL +M      PN VTYN                     
Sbjct: 155 TTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNT-------------------- 190

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG-VAPTLATYNILIYGLCKWG 362
                          +I G+  +G +  AL++  EM  RG +AP   TY  +I G CK G
Sbjct: 191 ---------------VIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVG 235

Query: 363 RVSDARHRFFEMLRKN-VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           RV +A   F EML K  V P+ + YN L+ GYC  G +  A L  D +  R +  TV TY
Sbjct: 236 RVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATY 295

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           N L+  L   G    A +L E M  +G+  DV TY I++NG CK GN+  A E F  M R
Sbjct: 296 NLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSR 355

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
           +G++     YT+ I    K G   E  +L +E + +G  PDL+ YN L++     G+++ 
Sbjct: 356 RGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDR 415

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A E++ +M      PD +TY +++     +G +   R L + M ++G+ P LVTY  LI 
Sbjct: 416 AFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLIS 475

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
            ++ +G ++ A    +EM  KG  P ++TYNALI GLC+  + D A  +  +M E GI P
Sbjct: 476 GYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITP 535

Query: 662 NKYTYTILI 670
           +  TY  LI
Sbjct: 536 DDSTYISLI 544



 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 141/413 (34%), Positives = 220/413 (53%), Gaps = 56/413 (13%)

Query: 192 CLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLD 251
           C   FN MLR+               L   G   +A E+ R M     +P+ VTYNT++ 
Sbjct: 153 CTTTFNIMLRH---------------LCSAGKPARALELLRQMP----RPNAVTYNTVIA 193

Query: 252 SFCKEGEMQEALELLWEMQGRG-CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG-L 309
            FC  G +Q AL+++ EM+ RG  +PN  TY  +I+G+ + G +++A  +  +ML  G +
Sbjct: 194 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 253

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
           K  A  YN +I GY ++G L  AL   + MV RGVA T+ATYN+L++ L   GR ++A  
Sbjct: 254 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 313

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
              EM  K +  D+ +YN L+ G+C+ GN+ +A  +F+ +  R +  TVVTY +LI  L 
Sbjct: 314 LVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALS 373

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVN---------------------------- 461
           + G ++   +L +  + +GI PD++ Y  ++N                            
Sbjct: 374 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 433

Query: 462 -------GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
                  G C +G +  AR+  +EM ++G+QPD   Y T I+G    GD  +A R++ EM
Sbjct: 434 TYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 493

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
           + KGF P L+TYN L+ GLCK G  ++A  ++++MV +G  PD  TY S+I  
Sbjct: 494 MNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 546



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/404 (32%), Positives = 218/404 (53%), Gaps = 10/404 (2%)

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M  L L +S  S +P++           A  L  +M    +     T+NI++  LC  G+
Sbjct: 114 MKSLSLPISTASLHPLLSALPS----APAFALFADMFRLRLPLCTTTFNIMLRHLCSAGK 169

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN-LVPTVVTYN 422
            +    R  E+LR+   P+ ++YNT++ G+C  G +  A  +  E+R R  + P   TY 
Sbjct: 170 PA----RALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYG 225

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQG-ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           T+I G C+ G ++ A ++ + M+ +G + P+ + Y  ++ G C  G L  A  + + M+ 
Sbjct: 226 TVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE 285

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
           +G+      Y   +      G  +EAY L EEM  KG   D+ TYN+L++G CK G++++
Sbjct: 286 RGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKK 345

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A E+   M   G     +TYTS+I+A  + G ++    LF+  +R+G+ P LV Y  LI+
Sbjct: 346 ALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALIN 405

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
           +H+  G ++ AF    EM+ K I P+ +TYN L+ GLC L R+D+A  L  +M + GI P
Sbjct: 406 SHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQP 465

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +  TY  LI+     G+ ++ALR+  EM+++   P   T++AL+
Sbjct: 466 DLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALI 509



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 130/411 (31%), Positives = 205/411 (49%), Gaps = 6/411 (1%)

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  L  DM +L L +   ++N ++      G    AL L  +M      P   TYN +I 
Sbjct: 138 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 193

Query: 357 GLCKWGRVSDARHRFFEML-RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
           G C  GRV  A     EM  R  + P+  +Y T++ G+C+ G + EA  +FDE+ ++  V
Sbjct: 194 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 253

Query: 416 -PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P  V YN LI G C  G L+ A   ++ M+ +G+   V TY ++V+     G  + A E
Sbjct: 254 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 313

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
              EM  KGL  D F Y   I G  K G+  +A  + E M  +G    ++TY  L++ L 
Sbjct: 314 LVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALS 373

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           K G ++E ++L  + V  G  PD + Y ++I++    G++ R  ++   M +K ++P  V
Sbjct: 374 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 433

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           TY  L+      GR++ A     EM  +GI+P+++TYN LI+G      +  A  +  +M
Sbjct: 434 TYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 493

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             +G  P   TY  LI   C  G   +A  + KEM++  I PD  T+ +L+
Sbjct: 494 MNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 544



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 115/353 (32%), Positives = 185/353 (52%), Gaps = 2/353 (0%)

Query: 183 YTKKSMVEQCLLVFNKML-RNGLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMGEFGIK 240
           +  +  V+  L +  +M  R G+ P+      +I      G   +A +V+  M+ +  +K
Sbjct: 195 FCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVK 254

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P  V YN ++  +C +G++  AL     M  RG +    TYN+L+     +G   +A  L
Sbjct: 255 PEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYEL 314

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           + +M   GL +   +YN +I G+ ++G + +AL + E M  RGV  T+ TY  LIY L K
Sbjct: 315 VEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSK 374

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G+V +    F E +R+ + PD++ YN L+  +  SGNI  AF +  E+  + + P  VT
Sbjct: 375 KGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 434

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YNTL+ GLC  G ++ A++L + M  +GI PD++TY  +++G    G++  A    NEM+
Sbjct: 435 YNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMM 494

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
            KG  P    Y   I G  K G   +A  + +EM+  G  PD  TY  L+ GL
Sbjct: 495 NKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 547



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/228 (33%), Positives = 125/228 (54%)

Query: 165 GGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS 224
           GG    + +   ++L+  + K+  V++ L +F  M R G+   V     +I  L   G  
Sbjct: 319 GGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQV 378

Query: 225 VKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVL 284
            +  +++      GI+P +V YN +++S    G +  A E++ EM+ +  +P+ VTYN L
Sbjct: 379 QETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTL 438

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           + G    G +++AR LI +M K G++    +YN +I GYS KG + +AL +  EM+ +G 
Sbjct: 439 MRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGF 498

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
            PTL TYN LI GLCK G+  DA +   EM+   + PD  +Y +L+ G
Sbjct: 499 NPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 546



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/180 (35%), Positives = 101/180 (56%), Gaps = 2/180 (1%)

Query: 181 LIY--TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LIY  +KK  V++   +F++ +R G+ PD+   N +I     +G   +A E+   M +  
Sbjct: 368 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 427

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           I P  VTYNT++   C  G + EA +L+ EM  RG  P+ VTYN LI+G+S  G+++ A 
Sbjct: 428 IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDAL 487

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            +  +M+  G   +  +YN +I G  + G   +A N+ +EMV  G+ P  +TY  LI GL
Sbjct: 488 RIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 547



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 58/110 (52%), Gaps = 10/110 (9%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKA--REVYRMMGEF---GIKPSI 243
           V++   + ++M + G+ PD+   N +I     +G+S+K   ++  R+  E    G  P++
Sbjct: 448 VDEARKLIDEMTKRGIQPDLVTYNTLI-----SGYSMKGDVKDALRIRNEMMNKGFNPTL 502

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           +TYN ++   CK G+  +A  ++ EM   G +P+  TY  LI G +   E
Sbjct: 503 LTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 552



 Score = 39.3 bits (90), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 37/76 (48%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y+ K  V+  L + N+M+  G  P +   N +I+ L  NG    A  + + M E GI P 
Sbjct: 477 YSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPD 536

Query: 243 IVTYNTMLDSFCKEGE 258
             TY ++++    E E
Sbjct: 537 DSTYISLIEGLTTEDE 552


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 147/508 (28%), Positives = 251/508 (49%), Gaps = 2/508 (0%)

Query: 186 KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV-LRDNGFSVKAREVYRMMGEFGIKPSIV 244
           + ++   L V ++M   G       C+ I++   R  GF    R + +++   G      
Sbjct: 121 RGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRAL-QVLHAKGCTLDSG 179

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
             N ++ + C++G + E +ELL ++   GC P+ V+YN ++ G       +    L+ +M
Sbjct: 180 NCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEM 239

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           +++G   +  ++N +I      GL  +      +M   G  P L  Y  +I G+CK G  
Sbjct: 240 VRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHH 299

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
             A      M    + P+++ YNT+L G C +    EA  L  E+   +     VT+N L
Sbjct: 300 EVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNIL 359

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           +D  C+ G ++   +L E M+  G +PDVITYT ++NG CK G +  A      M   G 
Sbjct: 360 VDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGC 419

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
           +P+  +YT  + G  +     +A  L   M+ +G  P+ +T+N L++ +CK G +E+A E
Sbjct: 420 KPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIE 479

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           LL++M+ +G  PD I+Y+++I    + G      +L N M+ KG++P  + Y+ +  A +
Sbjct: 480 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALS 539

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
             GR +     F  +Q   +R +   YNA+I+ LC+    D+A   F  M   G +PN+ 
Sbjct: 540 REGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNES 599

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDR 692
           TYTILI    + G  +EA  L  E+  R
Sbjct: 600 TYTILIRGLASEGLVREAQDLLSELCSR 627



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 130/459 (28%), Positives = 212/459 (46%), Gaps = 6/459 (1%)

Query: 247 NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
           + ++ S C  G   +A   L      G +   V YN +I G+ R G   Q     R    
Sbjct: 48  SALIRSLCAAGRTADAARAL---DTAGDAAGVVAYNAMIAGYCRAG---QVAAARRLAAA 101

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
           + +  +A++Y PI+     +GL+ +AL + +EM  RG A T    ++++   C+ G    
Sbjct: 102 VPVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRS 161

Query: 367 ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
           A      +  K    D  + N ++   C  G + E   L  +L S    P +V+YN ++ 
Sbjct: 162 AVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLK 221

Query: 427 GLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
           GLC     +  ++L   M+  G  P+V T+  ++   C+ G      E  ++M   G  P
Sbjct: 222 GLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTP 281

Query: 487 DRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
           D   Y T I G  K G    A  +   M + G  P+++ YN ++ GLC     EEA +LL
Sbjct: 282 DLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLL 341

Query: 547 RKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAAR 606
            +M  +    D +T+  ++    + G + R  +L   ML  G  P ++TYT +I+     
Sbjct: 342 AEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKE 401

Query: 607 GRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
           G ++ A M    M   G +PN I+Y  ++ GLCR  R   A  L   M ++G LPN  T+
Sbjct: 402 GLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTF 461

Query: 667 TILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             LIN  C  G  ++A+ L K+ML     PD  ++S ++
Sbjct: 462 NTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 500



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 198/388 (51%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           ++   + L+    +  + EQ     ++M  +G  PD++    II  +  +G    A ++ 
Sbjct: 247 NVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDIL 306

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M  +G+KP++V YNT+L   C     +EA +LL EM    C  + VT+N+L+  F +N
Sbjct: 307 SRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQN 366

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G +++   L+  ML+ G      +Y  +I G+ ++GL+ EA+ L + M   G  P   +Y
Sbjct: 367 GLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISY 426

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
            I++ GLC+  R  DA+     M+++  +P+ +++NTL+   C+ G + +A  L  ++  
Sbjct: 427 TIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLV 486

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
               P +++Y+T+IDGL + G  E A +L   MIN+GI P+ I Y+ M +   + G    
Sbjct: 487 NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDK 546

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
             + F+ +    ++ D   Y   I+   K  +T  A      M++ G  P+  TY +L+ 
Sbjct: 547 IIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIR 606

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHI 559
           GL   G + EA +LL ++     +  H+
Sbjct: 607 GLASEGLVREAQDLLSELCSRRAVRKHL 634



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/410 (24%), Positives = 171/410 (41%), Gaps = 3/410 (0%)

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +YN +I GY   G   +            V P   TY  ++  LC  G ++DA     EM
Sbjct: 78  AYNAMIAGYCRAG---QVAAARRLAAAVPVPPNAYTYFPIVRSLCARGLIADALTVLDEM 134

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
             +         + +L   CR G    A      L ++         N ++  +C  G +
Sbjct: 135 PLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCV 194

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           +   +L   + + G  PD+++Y  ++ G C         E   EM+R G  P+   + T 
Sbjct: 195 DEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTL 254

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           IA   + G   + +    +M   G  PDL  Y  ++ G+CK G  E AN++L +M   G 
Sbjct: 255 IAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGL 314

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            P+ + Y +++             DL   M ++      VT+ +L+      G ++    
Sbjct: 315 KPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIE 374

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
              +M   G  P+VITY  +ING C+   +D+A  L  +M   G  PN  +YTI++   C
Sbjct: 375 LLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLC 434

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
            A  W +A  L   M+ +   P+  T + L+     K     A+E L+ +
Sbjct: 435 RAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQM 484


>gi|300681581|emb|CBI75525.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 149/530 (28%), Positives = 271/530 (51%), Gaps = 4/530 (0%)

Query: 171 VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV 230
           V +++ + LL    + + +     +F+ M  +G  P++ + + ++  +  +G  +   E 
Sbjct: 174 VELQVCNFLLKGLVEGNQIMYVRSLFDDMKISGPSPNIYSYS-VLMSMYTHGAKLCLEEA 232

Query: 231 YRMMGEF---GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITG 287
             ++ E    G++P+  TY T L   C+  +++ A   L  +  RG   N   +N +I G
Sbjct: 233 QELLSEMEVEGVRPNAATYGTYLYGLCRAKQVKSAWNFLQMLCQRGYPCNSYCFNAVIHG 292

Query: 288 FSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPT 347
           F  +G++ +A  +   M K G     HSY+ ++ G  ++G ++    +  EM   G+ P 
Sbjct: 293 FCHDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPN 352

Query: 348 LATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFD 407
           L +Y+ L++GLC+ GRV  A   F  +  +    D I Y+ +L+G C+  ++   + L++
Sbjct: 353 LVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWN 412

Query: 408 ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG 467
           ++   N VP    Y++LI   CR+  L+ A ++ E MI  GI P+V+T TI+V+G    G
Sbjct: 413 DMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEG 472

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
            +  A  F +++ + G+ P+   Y   I G  K+   ++ + +  +M+ +G+ PD + Y+
Sbjct: 473 LIGEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYS 532

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
           +++ G  K   L+EA  L  KMV +G  P+  TYTS+I+       L     LF +M+ +
Sbjct: 533 IIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGE 592

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
           GL+P  + YT LI  +  R  ++ A   F EM+ +G+  +   Y  LI G  ++  +D A
Sbjct: 593 GLTPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGA 652

Query: 648 YGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
                +M  +G+ P   TYT LI      G+ ++A+ +Y  ML   I PD
Sbjct: 653 QLFMEEMMNKGLTPTVVTYTDLIIGYFKIGDEKKAMVMYNSMLQAGIAPD 702



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 131/461 (28%), Positives = 240/461 (52%), Gaps = 2/461 (0%)

Query: 247 NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL--EQARGLIRDM 304
           N +L    +  ++     L  +M+  G SPN  +Y+VL++ ++   +L  E+A+ L+ +M
Sbjct: 180 NFLLKGLVEGNQIMYVRSLFDDMKISGPSPNIYSYSVLMSMYTHGAKLCLEEAQELLSEM 239

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
              G++ +A +Y   + G      +  A N  + +  RG       +N +I+G C  G+V
Sbjct: 240 EVEGVRPNAATYGTYLYGLCRAKQVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQV 299

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
             A   F  M +   +PD+ SY+ L+ G C+ G++   + +  E+    + P +V+Y++L
Sbjct: 300 HKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSL 359

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           + GLCR G +E+A +L + + +QG   D I Y+I+++G C+  +L +  + +N+M+    
Sbjct: 360 LHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNF 419

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            PD + Y++ I    +     EA  + E M+  G  P+++T  +LVHG    G + EA  
Sbjct: 420 VPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFL 479

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
            L K+   G +P+  TY  II+   ++        +F +M+++G  P  V Y+++I    
Sbjct: 480 FLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFV 539

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
               L+ AF  + +M  +G +PN+ TY +LINGLC   ++ +   LF  M  EG+ P++ 
Sbjct: 540 KALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRI 599

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            YT LI   C   N + AL +++EM    +  D   ++ L+
Sbjct: 600 LYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLI 640



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 206/419 (49%), Gaps = 41/419 (9%)

Query: 328 LLVEALNLEEEMVT----RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
           + VE    E+ +VT    + V   L   N L+ GL +  ++   R  F +M      P+I
Sbjct: 152 VFVELSMFEDALVTYVEAKKVGVELQVCNFLLKGLVEGNQIMYVRSLFDDMKISGPSPNI 211

Query: 384 ISYNTL-------------------------------------LYGYCRSGNIGEAFLLF 406
            SY+ L                                     LYG CR+  +  A+   
Sbjct: 212 YSYSVLMSMYTHGAKLCLEEAQELLSEMEVEGVRPNAATYGTYLYGLCRAKQVKSAWNFL 271

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
             L  R        +N +I G C  G +  A ++ + M   G +PDV +Y+I+V+G CK 
Sbjct: 272 QMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQ 331

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G++        EM R G+ P+  +Y++ + G  + G    A+ L + +  +GF  D I Y
Sbjct: 332 GDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVY 391

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           ++++HG C+   LE   +L   MV   F+PD   Y+S+I+A      L+   ++F  M+ 
Sbjct: 392 SIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMIC 451

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
            G+ P +VT T+L+H  +  G +  AF++  +++  G+ PN+ TY  +INGLC++ + + 
Sbjct: 452 DGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPND 511

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            +G+F DM + G +P+   Y+I+I+    A + QEA RLY +M+D   +P+  T+++L+
Sbjct: 512 VWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLI 570


>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 806

 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 149/535 (27%), Positives = 268/535 (50%), Gaps = 6/535 (1%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           S ++   ++  Y + ++ EQ L +F ++   G  P VK  N ++  L           +Y
Sbjct: 108 SQELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINALY 167

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M   G++P++ TYN +L + C+ G++  A +LL EM  +GC P+ V+Y  +I+   + 
Sbjct: 168 NNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKL 227

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G++++AR L      +  +     YN +I G  ++    EA +L  EMV RGV P + +Y
Sbjct: 228 GDVDKAREL-----AMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISY 282

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           + +I  L   G V  +   F  M  +   P++ ++ +L+ G+   G +G+A  L++ +  
Sbjct: 283 STVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIR 342

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
             + P VV YNTLI GLC  G+++ A  +   M    I P+V TY+ ++ G  K G+L  
Sbjct: 343 EGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVS 402

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A E +N+M+  G +P+   YT  +    ++    +A+ L + M++ G PP +IT+N  + 
Sbjct: 403 ACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIK 462

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           GLC+ G +E A  +L +M     +P+  TY  ++         R    L   +  + +  
Sbjct: 463 GLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEF 522

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
             VTY  +++  +  G  +       +M V GI+ + IT N  +N  C+L ++  A  + 
Sbjct: 523 DCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVL 582

Query: 652 IDME-EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            ++  E+    +  T+TI++   CN    +EA+    EML R I P+  T + L+
Sbjct: 583 DNISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLV 637



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 144/495 (29%), Positives = 247/495 (49%), Gaps = 6/495 (1%)

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGEFG-IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQ 270
           + ++KVLR     V + E ++ +   G  K + +TY TM+D   +  EM     LL +M+
Sbjct: 42  SHVVKVLRQEHDIVSSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQQMK 101

Query: 271 GRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLV 330
                 +   +  +I  + R+   EQ   +   + + G + S   YN ++     + L  
Sbjct: 102 LENVPCSQELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFK 161

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
               L   M + G+ P + TYN+L+  LC+ G+V  A     EM  K   PD +SY T++
Sbjct: 162 MINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVI 221

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
              C+ G++ +A  L     +    P V  YN LI G+C+    + A  L   M+++G+ 
Sbjct: 222 SSMCKLGDVDKAREL-----AMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVD 276

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
           P+VI+Y+ +++    MGN+ ++   F  M  +G +P+   +T+ I G    G   +A  L
Sbjct: 277 PNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGL 336

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
              M+ +G  P+++ YN L+HGLC  G+++EA  +  +M  D   P+  TY++II+   +
Sbjct: 337 WNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAK 396

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
            GDL    + +N M+  G  P +V YT ++         + AF     M   G  P VIT
Sbjct: 397 SGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVIT 456

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           +N  I GLCR  R++ A  +   ME+   LPN  TY  L++    A  ++EA  L +E+ 
Sbjct: 457 FNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELE 516

Query: 691 DREIEPDYCTHSALL 705
           +R++E D  T++ ++
Sbjct: 517 ERKVEFDCVTYNTIM 531



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 132/498 (26%), Positives = 246/498 (49%), Gaps = 31/498 (6%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           S+KI +L+L     +++ +    ++N M   GL P+V   N ++K L  NG    A ++ 
Sbjct: 143 SVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLL 202

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEM------------------------------QE 261
             M   G  P  V+Y T++ S CK G++                              +E
Sbjct: 203 VEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMKFEPVVPVYNALIHGVCKECRFKE 262

Query: 262 ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC 321
           A +L+ EM  RG  PN ++Y+ +I+  S  G +E +  +   M   G + +  ++  +I 
Sbjct: 263 AFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIK 322

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           G+  +G + +A+ L   M+  GV+P +  YN LI+GLC  G + +A   + +M + ++ P
Sbjct: 323 GFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRP 382

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           ++ +Y+T++YG+ +SG++  A   ++++ +    P VV Y  ++D LC+    + A  L 
Sbjct: 383 NVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLI 442

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
           +NMI+ G  P VIT+   + G C+ G +  A    ++M +    P+   Y   + G  + 
Sbjct: 443 DNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRA 502

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
               EA  L  E+  +    D +TYN +++G    G  ++  +LL KM+ +G   D IT 
Sbjct: 503 NAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITV 562

Query: 562 TSIIHASLEMGDLRRGRDLFNNM-LRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
            + ++A  ++G ++    + +N+   K     ++T+T+++         E A +Y  EM 
Sbjct: 563 NTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEML 622

Query: 621 VKGIRPNVITYNALINGL 638
            +GI PN+ T+N L+ G 
Sbjct: 623 KRGIFPNIATWNVLVRGF 640



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 114/228 (50%), Gaps = 2/228 (0%)

Query: 182 IYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKP 241
           +  + SM +Q   + + M+ +G  P V   N  IK L   G    A  V   M ++   P
Sbjct: 428 VLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLP 487

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
           +I TYN +LD   +    +EA  L+ E++ R    + VTYN ++ GFS NG  +Q   L+
Sbjct: 488 NIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLL 547

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN-LEEEMVTRGVAPTLATYNILIYGLCK 360
             ML  G+K+   + N  +  Y + G +  A+  L+     +     + T+ I+++G+C 
Sbjct: 548 GKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGICN 607

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYG-YCRSGNIGEAFLLFD 407
           W    +A     EML++ + P+I ++N L+ G + + G++G   +L D
Sbjct: 608 WLGTEEAVVYLHEMLKRGIFPNIATWNVLVRGFFSKLGHMGPIRILDD 655


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 146/473 (30%), Positives = 250/473 (52%), Gaps = 13/473 (2%)

Query: 174 KILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNC--NRIIKVLRDNGFSVKAREVY 231
           ++ ++++  Y +   ++  +  FN+M+  G +P   NC  N +  V+  + F+    + +
Sbjct: 95  RLYEVMINAYVQSQSLDSSISYFNEMVDKGFVPG-SNCFNNLLTFVVGSSSFN----QWW 149

Query: 232 RMMGEFGIKPSIVTYN--TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           R   E  IK  +  Y+   ++   C+ GE++++ +LL E++  G SPN V Y  LI G  
Sbjct: 150 RFFNESKIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCC 209

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           + GE+E+A+ L  +M K GL  +  +Y  +I G  + G+  +   + E+M   GV P L 
Sbjct: 210 KRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLY 269

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           TYN ++   CK GR  DA   F EM  + V  +I++YNTL+ G CR     EA  + D++
Sbjct: 270 TYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQM 329

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
           +S  + P ++TYNTLIDG C  G L  A  L  ++ ++G+ P ++TY I+V+G CK G+ 
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDT 389

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
           S A +   EM  +G++P +  YT  I    ++ +  +A +L+  M   G  PD+ TY+VL
Sbjct: 390 SGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVL 449

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           +HG C  G + EA+ L + MV     P+ + Y +++    + G   R   LF  M  K L
Sbjct: 450 IHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKEL 509

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
            P + +Y  +I       + + A     +M   GI P+    ++++N + R +
Sbjct: 510 PPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPS----DSILNLISRAK 558



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 128/392 (32%), Positives = 214/392 (54%), Gaps = 3/392 (0%)

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS-DARHRFFEM 374
           Y  +I  Y +   L  +++   EMV +G  P    +N L+  +   G  S +   RFF  
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVV--GSSSFNQWWRFFNE 154

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
            +  V  D+ S+  ++ G C +G I ++F L  ELR     P VV Y TLIDG C+ G++
Sbjct: 155 SKIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEI 214

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           E A+ L   M   G++ +  TYT++++G  K G      E + +M   G+ P+ + Y   
Sbjct: 215 EKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCV 274

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           +    K G T +A++L +EM  +G   +++TYN L+ GLC+     EAN+++ +M  DG 
Sbjct: 275 MNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGI 334

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            P+ ITY ++I     +G L +   L  ++  +GLSP+LVTY +L+     +G    A  
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGK 394

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
              EM+ +GI+P+ ITY  LI+   R+  +++A  L   MEE G+ P+ +TY++LI+  C
Sbjct: 395 VVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFC 454

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
             G   EA RL+K M+ +++EP+   ++ ++L
Sbjct: 455 IKGQMNEASRLFKLMVAKKLEPNKVIYNTMVL 486



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 124/451 (27%), Positives = 231/451 (51%), Gaps = 1/451 (0%)

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           Y  M++++ +   +  ++    EM  +G  P    +N L+T    +    Q      +  
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNES- 155

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
           K+ + +  +S+  +I G  E G + ++ +L  E+   G +P +  Y  LI G CK G + 
Sbjct: 156 KIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIE 215

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
            A+  FFEM +  ++ +  +Y  L++G  ++G   + F ++++++   + P + TYN ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVM 275

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           +  C+ G  + A +L + M  +G+  +++TY  ++ G C+    + A +  ++M   G+ 
Sbjct: 276 NQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGIN 335

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           P+   Y T I G   +G   +A  L  ++ ++G  P L+TYN+LV G CK G    A ++
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
           +++M   G  P  ITYT +I     M ++ +   L + M   GL+P + TY+VLIH    
Sbjct: 396 VKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCI 455

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
           +G++  A   F  M  K + PN + YN ++ G C+     +A  LF +MEE+ + PN  +
Sbjct: 456 KGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVAS 515

Query: 666 YTILINENCNAGNWQEALRLYKEMLDREIEP 696
           Y  +I   C     +EA  L ++M+D  I+P
Sbjct: 516 YRYMIEVLCKERKSKEAEGLVEKMIDTGIDP 546



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 211/428 (49%), Gaps = 7/428 (1%)

Query: 281 YNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI---ICGYSEKGLLVEALNLEE 337
           Y V+I  + ++  L+ +     +M+  G    ++ +N +   + G S         N  +
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESK 156

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
             V   V     ++ I+I G C+ G +  +     E+      P+++ Y TL+ G C+ G
Sbjct: 157 IKVDLDVY----SFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRG 212

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
            I +A  LF E+    LV    TY  LI GL + G  +   ++ E M   G+ P++ TY 
Sbjct: 213 EIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYN 272

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
            ++N  CK G    A + F+EM  +G+  +   Y T I G  +    +EA ++ ++M + 
Sbjct: 273 CVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSD 332

Query: 518 GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
           G  P+LITYN L+ G C +G L +A  L R +   G  P  +TY  ++    + GD    
Sbjct: 333 GINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGA 392

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
             +   M  +G+ P+ +TYT+LI   A    +E A    S M+  G+ P+V TY+ LI+G
Sbjct: 393 GKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHG 452

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
            C   ++++A  LF  M  + + PNK  Y  ++   C  G+   ALRL++EM ++E+ P+
Sbjct: 453 FCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPN 512

Query: 698 YCTHSALL 705
             ++  ++
Sbjct: 513 VASYRYMI 520



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 73/164 (44%), Gaps = 1/164 (0%)

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           Y  +I+A ++   L      FN M+ KG  P    +  L+            + +F+E +
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESK 156

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
           +K +  +V ++  +I G C    I++++ L +++ E G  PN   YT LI+  C  G  +
Sbjct: 157 IK-VDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIE 215

Query: 681 EALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           +A  L+ EM    +  +  T++ L+        K    E  E +
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKM 259


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 134/419 (31%), Positives = 212/419 (50%)

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           ++YN +L+   K G          +M G GC PN  TY  L+    +    E+AR + R 
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M   G   +  SY+ +I G      + EA  L  EM+  G  P + TY  L+ GLCK G+
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           + +A   F  M+ +   PD + YN L+ G+ + G++GEA+ LF+E+  +  +PTV TYN+
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           L+ G  R G+    Q L ++M+ QG +P++ T+  +++G CKMG++  A   F EM   G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
             PD  +Y T + G    G   EA RL  EM+  G  PD+++YN+L+ G  K G+L+ A 
Sbjct: 258 CPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
           +L  ++   G  PD  +Y++II      G +     +F +M+  G +P       L+   
Sbjct: 318 KLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGL 377

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
               RL  +   F  M      P +  YN L+  LC+ +R D    +F ++ E G  P+
Sbjct: 378 CRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPD 436



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 136/441 (30%), Positives = 226/441 (51%), Gaps = 1/441 (0%)

Query: 279 VTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
           ++YN L+   +++G  +   G   DML  G   + ++Y  ++    +     EA ++   
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
           M  +G +P + +Y+ILI GLC+  +V +A     EM+     P++++Y +LL G C+ G 
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           + EA  LF  +  R   P  V YN LIDG  + GD+  A +L E M+ +G +P V TY  
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           +++G  + G     +  F +MLR+G  P+ F +   + G  K+GD  EA+RL  EM + G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
            PPD+++YN L+ G+C  G   EA  LLR+M+  G  PD ++Y  +I    + G L    
Sbjct: 258 CPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
            LF  + + GL P   +Y+ +I      G++  AF+ F +M   G  P+      L+ GL
Sbjct: 318 KLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGL 377

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
           CR  R+ ++  LF  M +   +P    Y +L+ + C A    +   ++ E+ +R   PD 
Sbjct: 378 CRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDV 437

Query: 699 CTHSALLLKQLDKDYKVHAVE 719
              S ++L+ L +     A E
Sbjct: 438 -EISKVILETLRRSDDKEAAE 457



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 142/426 (33%), Positives = 229/426 (53%), Gaps = 6/426 (1%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL +  K    +     +N ML  G +P+      +++ L       +AR V+R M   G
Sbjct: 23  LLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQG 82

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
             P++ +Y+ ++   C+  ++ EA ELL EM   G  PN VTY  L++G  + G+L++A 
Sbjct: 83  CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAV 142

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L   M+  G       YN +I G+S+KG + EA  L EEM+ +G  PT+ TYN L+ G 
Sbjct: 143 DLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGF 202

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
            + G     +  F +MLR+  +P+I ++N LL G+C+ G++ EA  LF E+RS    P V
Sbjct: 203 SRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDV 262

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           V+YNTL+ G+C  G    AQ+L   MI  G+ PD+++Y I+++G  K G L  A + F E
Sbjct: 263 VSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYE 322

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           + + GL+PD F+Y+T I    + G    A+ + ++M+A G  PD      LV GLC+   
Sbjct: 323 IPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGER 382

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD---LFNNMLRKGLSPTLVT 595
           L E+ EL + MV    +P    Y  +++   ++   +R  D   +F+ +  +G SP +  
Sbjct: 383 LTESCELFQAMVKFECVPLIPEYNLLMY---KLCKAKRSDDVCEIFHELTERGFSPDVEI 439

Query: 596 YTVLIH 601
             V++ 
Sbjct: 440 SKVILE 445



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 132/435 (30%), Positives = 212/435 (48%), Gaps = 3/435 (0%)

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
           N +++VL  +G        Y  M   G  P+  TY  +L S C+    +EA  +   M  
Sbjct: 21  NYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAA 80

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
           +GCSPN  +Y++LI G  R  ++++A  L+ +M+  G + +  +Y  ++ G  + G L E
Sbjct: 81  QGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKE 140

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
           A++L   MV RG  P    YN+LI G  K G + +A   F EML K  IP + +YN+LL 
Sbjct: 141 AVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLS 200

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
           G+ R G  G    LF ++  +  VP + T+N L+DG C+ GD+  A +L   M + G  P
Sbjct: 201 GFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPP 260

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           DV++Y  ++ G C  G    A+    EM+R G+ PD  +Y   I G  K G    A +L 
Sbjct: 261 DVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLF 320

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
            E+   G  PD  +Y+ ++  LC+ G +  A  + + M+ +G  PD      ++      
Sbjct: 321 YEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRG 380

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
             L    +LF  M++    P +  Y +L++      R +     F E+  +G  P+V   
Sbjct: 381 ERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEIS 440

Query: 632 NALINGLCRLRRIDQ 646
             ++     LRR D 
Sbjct: 441 KVILE---TLRRSDD 452



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 140/467 (29%), Positives = 235/467 (50%), Gaps = 17/467 (3%)

Query: 108 LRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGL 167
           + FF+W  +Q         +  +LE+L +SG             C +++G  + ++G G 
Sbjct: 1   MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGR------------CDHVYGTYNDMLGAG- 47

Query: 168 SSCV-SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
             CV +      LL    +    E+   VF  M   G  P+V + + +I  L       +
Sbjct: 48  --CVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDE 105

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A E+   M + G +P++VTY ++L   CK G+++EA++L   M  RGC P+GV YNVLI 
Sbjct: 106 AAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLID 165

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           GFS+ G++ +A  L  +ML+ G   +  +YN ++ G+S KG      +L ++M+ +G  P
Sbjct: 166 GFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVP 225

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
            + T+N L+ G CK G + +A   F EM      PD++SYNTL+ G C  G   EA  L 
Sbjct: 226 NIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLL 285

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
            E+    + P +V+YN LIDG  + G L+ A +L   +   G+ PD  +Y+ +++  C+ 
Sbjct: 286 REMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRA 345

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G +  A   F +M+  G  PD       + G  +    +E+  L + M+     P +  Y
Sbjct: 346 GKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEY 405

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           N+L++ LCK    ++  E+  ++   GF PD +  + +I  +L   D
Sbjct: 406 NLLMYKLCKAKRSDDVCEIFHELTERGFSPD-VEISKVILETLRRSD 451



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 134/260 (51%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL  +++K    +   +F  MLR G +P++   N ++      G  V+A  ++  M   G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
             P +V+YNT++   C +G+  EA  LL EM   G  P+ V+YN+LI G+S++G L+ A 
Sbjct: 258 CPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L  ++ K GL+  A SY+ II      G +  A  + ++M+  G AP  A    L+ GL
Sbjct: 318 KLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGL 377

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C+  R++++   F  M++   +P I  YN L+Y  C++    +   +F EL  R   P V
Sbjct: 378 CRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDV 437

Query: 419 VTYNTLIDGLCRYGDLEVAQ 438
                +++ L R  D E A+
Sbjct: 438 EISKVILETLRRSDDKEAAE 457


>gi|77552391|gb|ABA95188.1| salt-inducible protein, putative [Oryza sativa Japonica Group]
          Length = 938

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 159/567 (28%), Positives = 272/567 (47%), Gaps = 51/567 (8%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V++ L V+ +M   G+ PD +  +  +  L D G    A  + + +    +    + YN 
Sbjct: 358 VDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAMAYNM 417

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++D  CKE  + EA +LL     +G +P+   Y+ LI  + + G L  A      M+  G
Sbjct: 418 VMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHG 477

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           ++ + H  + ++  + + G+  EA+    +    G+      YNI +   CK G +++A 
Sbjct: 478 IETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAV 537

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               EM    + PD I Y  L+ GYC  G +  A  +F+E+   N+ P +VTYN L  G 
Sbjct: 538 KLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGF 597

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G +     L + M +QG+ P+ +TY I + G C+ GNLS A   FN +  KG+    
Sbjct: 598 CKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIE 657

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             Y++ + G L  G T  AY L   +  +G   D  + + L++ LC++G+++ A+ + + 
Sbjct: 658 VMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKI 717

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M+    +PD I+Y+ +I    + GD+ +    F++M+++GLS  ++ YT+L++ +   GR
Sbjct: 718 MLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGR 777

Query: 609 LELAFMYFSEMQVKGIRPNVIT-------------------------------------- 630
           L+ A   F +M   GI+P+VI                                       
Sbjct: 778 LQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLS 837

Query: 631 -------------YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
                        Y  LI+G C+   + +A  LF +M ++G+ P+ Y YT LIN  C+ G
Sbjct: 838 SMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQG 897

Query: 678 NWQEALRLYKEMLDREIEPDYCTHSAL 704
              +A  L +EM+D+ IEPD  T S L
Sbjct: 898 EISKAEDLLQEMIDKGIEPDELTFSVL 924



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 153/574 (26%), Positives = 271/574 (47%), Gaps = 26/574 (4%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           S+   +LLL    +    E  L  +N+M    L PDV     + + L       +A +V+
Sbjct: 306 SVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQVW 365

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M E G+KP    Y++ L   C  G+   A  +L E+         + YN+++ G  + 
Sbjct: 366 AEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAMAYNMVMDGLCKE 425

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
             L++A  L+ +  + G     + Y+ +I  Y + G L+ A++  E MV+ G+       
Sbjct: 426 MRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIV 485

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           + L+    K G  S+A   F +     +  D + YN  +  YC++GN+ EA  L +E++ 
Sbjct: 486 SYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKY 545

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
             L P  + Y  LI G C  G+++ AQQ+ E M+   I PD++TY I+ +G CK G +  
Sbjct: 546 GGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVME 605

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
             +  + M  +GL+P+   Y   I G  + G+ SEA  L   +  KG     + Y+ +V 
Sbjct: 606 VFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVC 665

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           G    G  + A  L  ++   G + DH + + +I+    +G+++   ++   ML   + P
Sbjct: 666 GYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVP 725

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
            +++Y+ LI  +   G ++ A ++F +M  +G+  +VI Y  L+NG C+  R+ +A  LF
Sbjct: 726 DVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLF 785

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEAL---------------------RLYKEML 690
           + M   GI P+   YT+L++     G+ +E L                     +L   M 
Sbjct: 786 VQMTNLGIKPDVIAYTVLLD-----GHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMK 840

Query: 691 DREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           D +IEPD   ++ L+  +   +Y V A E  + +
Sbjct: 841 DMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEM 874



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 141/467 (30%), Positives = 246/467 (52%), Gaps = 20/467 (4%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
           +  M+ +G+  +    + +++  R  G + +A   +    + G+    V YN  +D++CK
Sbjct: 470 YEAMVSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCK 529

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
            G M EA++LL EM+  G +P+ + Y  LI+G+   GE++ A+ +  +MLK  ++    +
Sbjct: 530 NGNMNEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVT 589

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           YN +  G+ + GL++E  +L + M  +G+ P   TY I I G C+ G +S+A   F  + 
Sbjct: 590 YNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVE 649

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL-RSRNLVPTVVTYNTLIDGLCRYGDL 434
            K +    + Y++++ GY  SG    A++LF  + R  NLV    + + LI+ LCR G++
Sbjct: 650 EKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDH-FSCSKLINDLCRVGNV 708

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A  + + M+   ++PDVI+Y+ +++  C+ G++  A  +F++M+++GL  D   YT  
Sbjct: 709 QGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTIL 768

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA------------ 542
           + G  K G   EA +L  +M   G  PD+I Y VL+ G  K  +L++             
Sbjct: 769 MNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLK-ETLQQGWEGIAKERRSFL 827

Query: 543 -----NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
                N+LL  M      PD   YT +I    +   L   R+LF+ ML+KGL+P    YT
Sbjct: 828 LRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYT 887

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRI 644
            LI+ + ++G +  A     EM  KGI P+ +T++ L     R R+I
Sbjct: 888 ALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVLNQSSLRSRKI 934



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 123/441 (27%), Positives = 202/441 (45%), Gaps = 35/441 (7%)

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
           L   + +LG+  S  ++N ++   +E G     L    EM    + P + T+ I+   L 
Sbjct: 294 LFSGICRLGVVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLF 353

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
           +  +V +A   + EM    V PD   Y++ L G C  G    A+++  E+    +    +
Sbjct: 354 QAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAM 413

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
            YN ++DGLC+   L+ A++L EN   QG  PDV  Y+ ++   CKMGNL  A + +  M
Sbjct: 414 AYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAM 473

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
           +  G++ +    +  +    KLG TSEA     +    G   D + YN+ +   CK G++
Sbjct: 474 VSHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNM 533

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
            EA +LL +M   G  PD I YT +I      G+++  + +F  ML+  + P +VTY +L
Sbjct: 534 NEAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNIL 593

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRI--------------- 644
                  G +   F     M  +G+ PN +TY   I G CR   +               
Sbjct: 594 ASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGI 653

Query: 645 --------------------DQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
                               D AY LF+ +  +G L + ++ + LIN+ C  GN Q A  
Sbjct: 654 DHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASN 713

Query: 685 LYKEMLDREIEPDYCTHSALL 705
           + K ML+ ++ PD  ++S L+
Sbjct: 714 VCKIMLEHDVVPDVISYSKLI 734



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 161/382 (42%), Gaps = 35/382 (9%)

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
           F  + R  V+P + ++N LL     +G        ++E++   L P V T+  +   L +
Sbjct: 295 FSGICRLGVVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQ 354

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
              ++ A Q+   M   G+ PD   Y+  + G C  G   +A     E+ R+ +  +  A
Sbjct: 355 AKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAMA 414

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           Y   + G  K     EA +L E    +G  PD+  Y+ L+   CK+G+L  A +    MV
Sbjct: 415 YNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMV 474

Query: 551 GDG---------------------------FIP--------DHITYTSIIHASLEMGDLR 575
             G                           F+         D + Y   +    + G++ 
Sbjct: 475 SHGIETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMN 534

Query: 576 RGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALI 635
               L N M   GL+P  + YT LI  +  +G ++ A   F EM    I P+++TYN L 
Sbjct: 535 EAVKLLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILA 594

Query: 636 NGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIE 695
           +G C+   + + + L   M ++G+ PN  TY I I   C  GN  EA  L+  + ++ I+
Sbjct: 595 SGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGID 654

Query: 696 PDYCTHSALLLKQLDKDYKVHA 717
                +S+++   L   +  HA
Sbjct: 655 HIEVMYSSMVCGYLLSGWTDHA 676



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/172 (20%), Positives = 78/172 (45%)

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
           G +P   T+  ++    E G+       +N M    L+P + T+ ++  +     +++ A
Sbjct: 302 GVVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEA 361

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
              ++EM   G++P+   Y++ + GLC   + D AY +  ++  E +      Y ++++ 
Sbjct: 362 LQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAMAYNMVMDG 421

Query: 673 NCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
            C      EA +L +    +   PD   +S L+         ++AV++ E++
Sbjct: 422 LCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAM 473


>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
 gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
          Length = 807

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 160/535 (29%), Positives = 258/535 (48%), Gaps = 44/535 (8%)

Query: 226 KAREVYRMMGEFGIK---PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYN 282
           +  E YR+  E   +   P  +TY  ++   C  G+++ A  L  EM  RG  P  +T  
Sbjct: 105 QCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYEEMVDRGLRPVVLTCK 164

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
            L+    ++G LE A   +R   K+     A ++  +I G      + EA    EEM   
Sbjct: 165 FLLNALCKSGNLELA---LRYFEKMSSIPCAATWTILIDGLFRAIRVDEACYYFEEMKHT 221

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
            + P   TY ++I GL K G+V++A     EM     +P + +Y +++ G+C++G++G+A
Sbjct: 222 AI-PNNWTYTVVINGLVKAGKVAEAERVLQEM----PVPTLANYTSVIGGHCKAGDMGKA 276

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
           + L ++++ +      +TYNTLI G CR  +++ A +L E M +   +PD+ TY I++ G
Sbjct: 277 YHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAG 336

Query: 463 SCKMGNLSMAREFFNEMLRKG-LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
            C+   LS AR+    +  +    P+  +Y T I G  K    ++AY+L  EM+  G  P
Sbjct: 337 LCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHP 396

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           D++TY+ L+ GLC  G   EA+  L +MVG   +P    Y+S+I      G+L     +F
Sbjct: 397 DVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVF 456

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
           ++M+  G  P L  Y  LI+     GRL  A +   EM  +G  P+ +TY  LI GLCR 
Sbjct: 457 DSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRW 516

Query: 642 RRIDQAYGLFIDMEEEGI--------------------------------LPNKYTYTIL 669
            R D+A  L++   E+GI                                 P  + Y  +
Sbjct: 517 SRTDEACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYATV 576

Query: 670 INENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           I   C   N  EA +L ++M+   I+PD  T  AL+     +D  V A+ +LE +
Sbjct: 577 IESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEM 631



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 147/452 (32%), Positives = 219/452 (48%), Gaps = 10/452 (2%)

Query: 280 TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
           TYN       R G+ E+A  L ++     L   + +Y  +I G    G L  A +L EEM
Sbjct: 92  TYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYEEM 151

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
           V RG+ P + T   L+  LCK G +  A  R+FE +  + IP   ++  L+ G  R+  +
Sbjct: 152 VDRGLRPVVLTCKFLLNALCKSGNLELA-LRYFEKM--SSIPCAATWTILIDGLFRAIRV 208

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
            EA   F+E++    +P   TY  +I+GL + G +  A+++ + M     +P +  YT +
Sbjct: 209 DEACYYFEEMK-HTAIPNNWTYTVVINGLVKAGKVAEAERVLQEMP----VPTLANYTSV 263

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           + G CK G++  A     +M RKG Q D   Y T I G  +L +   AY L EEM +  F
Sbjct: 264 IGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDF 323

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVG-DGFIPDHITYTSIIHASLEMGDLRRGR 578
            PD+ TY++L+ GLC+   L EA +LL  +   D   P+ ++Y ++I    +   +    
Sbjct: 324 VPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAY 383

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
            LF  M+  G  P +VTY+ LI      GR   A  Y  EM  K I P V  Y+++I+GL
Sbjct: 384 QLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGL 443

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
           CR   +D A  +F  M   G  PN   Y  LI   C  G   +A    KEM +R   PD 
Sbjct: 444 CRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDG 503

Query: 699 CTHSALLLKQLDKDYKVHAVE-YLESLTLGAE 729
            T+  L++          A + Y+ SL  G E
Sbjct: 504 VTYGTLIVGLCRWSRTDEACDLYVRSLEQGIE 535



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 146/533 (27%), Positives = 235/533 (44%), Gaps = 70/533 (13%)

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           K  E  R++ E  + P++  Y +++   CK G+M +A  LL +M+ +G   + +TYN LI
Sbjct: 241 KVAEAERVLQEMPV-PTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLI 299

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG-V 344
            G  R  E+++A  L+ +M          +Y+ +I G      L EA +L   +      
Sbjct: 300 HGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDC 359

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
            P + +YN LI G  K  RV+DA   F EM+     PD+++Y+TL+ G C +G   EA  
Sbjct: 360 TPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHS 419

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
             +E+  + ++P V  Y+++I GLCR G+L+ A  + ++M+  G  P++  Y  ++ G C
Sbjct: 420 YLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLC 479

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSE------------------ 506
           K G L  A+    EM  +G  PD   Y T I G  +   T E                  
Sbjct: 480 KTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISET 539

Query: 507 --------------AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
                         A R+   +LA G  P    Y  ++  LCK  +L EA +LL  M+G 
Sbjct: 540 SCNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGA 599

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV-------------- 598
           G  PD  T  +++ A                M+R G  P++ TY+               
Sbjct: 600 GIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEA 659

Query: 599 ----------------------LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
                                 LI A++ + ++E A     E++ K    +++ YN L+ 
Sbjct: 660 HVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLK 719

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           GL R R +   Y L  +M+    + N+ T+ ILI   C  G    A+R+  EM
Sbjct: 720 GLFRTRNLQMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEM 772



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 137/457 (29%), Positives = 221/457 (48%), Gaps = 9/457 (1%)

Query: 240 KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
           + ++ TYN   ++  + G+ +EA  L  E   +   P+ +TY +LI G    G+L+ A  
Sbjct: 87  RHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACS 146

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
           L  +M+  GL+    +   ++    + G L  AL   E+M +    P  AT+ ILI GL 
Sbjct: 147 LYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSS---IPCAATWTILIDGLF 203

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
           +  RV +A + +FE ++   IP+  +Y  ++ G  ++G + EA  +  E+     VPT+ 
Sbjct: 204 RAIRVDEACY-YFEEMKHTAIPNNWTYTVVINGLVKAGKVAEAERVLQEMP----VPTLA 258

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
            Y ++I G C+ GD+  A  L E+M  +G   D +TY  +++G C++  +  A E   EM
Sbjct: 259 NYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEM 318

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG-FPPDLITYNVLVHGLCKLGS 538
                 PD F Y   IAG  +    SEA  L   +  +    P++++YN L+ G  K   
Sbjct: 319 KSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAAR 378

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           + +A +L  +MV  G  PD +TY+++I      G           M+ K + P +  Y+ 
Sbjct: 379 VNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSS 438

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           +I      G L+ A   F  M   G +PN+  YN+LI GLC+  R+  A     +M E G
Sbjct: 439 VISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERG 498

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIE 695
             P+  TY  LI   C      EA  LY   L++ IE
Sbjct: 499 CSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIE 535



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 141/502 (28%), Positives = 234/502 (46%), Gaps = 8/502 (1%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMGEFGIKPSIVTYN 247
           +++   +  +M  N  +PD+   + +I  L       +AR++   +  E    P++V+YN
Sbjct: 308 IDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYN 367

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
           T++D F K   + +A +L  EM   G  P+ VTY+ LI G    G   +A   + +M+  
Sbjct: 368 TLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGK 427

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
            +      Y+ +I G    G L  A  + + MV  G  P LA YN LIYGLCK GR+ DA
Sbjct: 428 KILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDA 487

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
           + R  EM  +   PD ++Y TL+ G CR     EA  L+     + +  +  + N +I  
Sbjct: 488 KLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIAS 547

Query: 428 L-CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
           L C    LE AQ++   ++  G  P    Y  ++   CK  NL+ AR+   +M+  G++P
Sbjct: 548 LRC----LEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKP 603

Query: 487 DRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
           D       +    +      A    EEM+  G  P + TY+ L++ L K G   EA+ +L
Sbjct: 604 DGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVL 663

Query: 547 RKMVG-DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
           R+++      PD + Y  +I A      +   R++   +  K    ++V Y  L+     
Sbjct: 664 RRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFR 723

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
              L++ +    EM+      N  T+N LI G CRL + D+A  +  +M++  + P+   
Sbjct: 724 TRNLQMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEMKKV-LTPSAAI 782

Query: 666 YTILINENCNAGNWQEALRLYK 687
              L++E   A   QE+  L K
Sbjct: 783 IKFLVDELARAEREQESKDLVK 804



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 53/104 (50%)

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
           R+    T+ TY     A    G+ E A+  F E   + + P+ ITY  LI GLC   ++ 
Sbjct: 83  RQDFRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLK 142

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
            A  L+ +M + G+ P   T   L+N  C +GN + ALR +++M
Sbjct: 143 LACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKM 186



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 58/118 (49%), Gaps = 3/118 (2%)

Query: 610 ELAFMYFSEMQVK-GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           E A ++F     +   R  V TYN     L R  + ++AY LF +   + ++P+  TY I
Sbjct: 71  ESAMVFFGWAGTRQDFRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGI 130

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVH-AVEYLESLT 725
           LI   CN G  + A  LY+EM+DR + P   T    LL  L K   +  A+ Y E ++
Sbjct: 131 LIRGLCNFGKLKLACSLYEEMVDRGLRPVVLT-CKFLLNALCKSGNLELALRYFEKMS 187


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 142/466 (30%), Positives = 239/466 (51%), Gaps = 5/466 (1%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRN-GLLPDVKNCNRIIKVLRDNGFSVKAREVYR--MM 234
           L+   Y K  + E+ + +F +M+        V++ N ++ V+   G   +A E Y   + 
Sbjct: 120 LVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVG 179

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
           G+  I P+++++N ++ + CK G +  A+E+  EM  + C P+  TY  L+ G  +   +
Sbjct: 180 GKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRI 239

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           ++A  L+ +M   G   S+ ++N +I G  +KG +V    L + M  +G  P   TYN +
Sbjct: 240 DEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTI 299

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           I GLC  G++  A      M+    +P+ ++Y TL+ G  + G   +   L   L  R  
Sbjct: 300 INGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGH 359

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
                 Y+TLI GL +    E A  L + M+ +G  P+++ Y+ +++G C+ G L  A+E
Sbjct: 360 HANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKE 419

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
              EM+ KG  P+ F Y++ I G  K G++ +A R+ +EM      P+ I Y+VL+HGLC
Sbjct: 420 ILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLC 479

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML--RKGLSPT 592
           + G L EA  +   M+G G  PD + Y+S+IH     G +  G  LFN ML       P 
Sbjct: 480 EDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPD 539

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           +VTY +L+ A   +  +  A    + M  +G  P++IT N  +N L
Sbjct: 540 VVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNAL 585



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 153/517 (29%), Positives = 257/517 (49%), Gaps = 42/517 (8%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMGEFGIKPSIVTYNTMLDSF 253
           VF++M R   +   KN   + +         KA E++ RM+ EF  + ++ ++N++L+  
Sbjct: 102 VFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVI 161

Query: 254 CKEGEMQEALELLWEMQGRG---CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
            +EG    ALE  +E    G    SPN +++N++I                + M KLGL 
Sbjct: 162 IQEGLFHRALEF-YECGVGGKTNISPNVLSFNLVI----------------KAMCKLGL- 203

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
                             +  A+ +  EM  +   P + TY  L+ GLCK  R+ +A   
Sbjct: 204 ------------------VDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLL 245

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
             EM  +   P  +++N L+ G C+ G++     L D +  +  VP  VTYNT+I+GLC 
Sbjct: 246 LDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCL 305

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
            G L+ A  L + M+    +P+ +TY  ++NG  K G         + +  +G   + +A
Sbjct: 306 KGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYA 365

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           Y+T I+G  K   + EA  L ++M+ KG  P+++ Y+ L+ GLC+ G L+EA E+L +MV
Sbjct: 366 YSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMV 425

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
             G  P+  TY+S+I    + G+ ++   ++  M +    P  + Y+VLIH     G+L 
Sbjct: 426 NKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLR 485

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM--EEEGILPNKYTYTI 668
            A M ++ M  +G+RP+V+ Y+++I+GLC    ++    LF +M  +E    P+  TY I
Sbjct: 486 EAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNI 545

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           L+   C   +   A+ L   MLDR   PD  T +  L
Sbjct: 546 LLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFL 582



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 145/467 (31%), Positives = 232/467 (49%), Gaps = 23/467 (4%)

Query: 201 RNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQ 260
           +  + P+V + N +IK +   G   +A EV+R M     +P + TY T++D  CKE  + 
Sbjct: 181 KTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRID 240

Query: 261 EALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII 320
           EA+ LL EMQ  GC P+ VT+NVLI G  + G++ +   L+ +M   G   +  +YN II
Sbjct: 241 EAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTII 300

Query: 321 CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
            G   KG L +A++L + MV     P   TY  LI GL K GR  D  H    +  +   
Sbjct: 301 NGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHH 360

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
            +  +Y+TL+ G  +     EA  L+ ++  +   P +V Y+ LIDGLCR G L+ A+++
Sbjct: 361 ANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEI 420

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
              M+N+G  P+  TY+ ++ G  K GN   A   + EM +    P+   Y+  I G  +
Sbjct: 421 LCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCE 480

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG--DGFIPDH 558
            G   EA  +   ML +G  PD++ Y+ ++HGLC  GS+E   +L  +M+       PD 
Sbjct: 481 DGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDV 540

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA-------------- 604
           +TY  ++ A  +   +    DL N+ML +G +P L+T  + ++A                
Sbjct: 541 VTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLD 600

Query: 605 -------ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRI 644
                   R R+  A      M  K + PN  T+  +I  LC+ +++
Sbjct: 601 ELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKV 647



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 131/417 (31%), Positives = 215/417 (51%), Gaps = 4/417 (0%)

Query: 312 SAHSYNPIICGYSEKGLLVEALNLEEEMV--TRGVAPTLATYNILIYGLCKWGRVSDARH 369
           +  S+N ++    ++GL   AL   E  V     ++P + ++N++I  +CK G V  A  
Sbjct: 150 TVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIE 209

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
            F EM  +   PD+ +Y TL+ G C+   I EA LL DE++     P+ VT+N LI+GLC
Sbjct: 210 VFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLC 269

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
           + GD+    +L +NM  +G +P+ +TY  ++NG C  G L  A    + M+     P+  
Sbjct: 270 KKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDV 329

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
            Y T I G +K G + +   L   +  +G   +   Y+ L+ GL K    EEA  L +KM
Sbjct: 330 TYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKM 389

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRL 609
           V  G  P+ + Y+++I      G L   +++   M+ KG +P   TY+ LI      G  
Sbjct: 390 VEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNS 449

Query: 610 ELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL 669
           + A   + EM      PN I Y+ LI+GLC   ++ +A  ++  M   G+ P+   Y+ +
Sbjct: 450 QKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSM 509

Query: 670 INENCNAGNWQEALRLYKEMLDREI--EPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           I+  CNAG+ +  L+L+ EML +E   +PD  T++ LL     ++   HA++ L S+
Sbjct: 510 IHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSM 566



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 105/394 (26%), Positives = 178/394 (45%), Gaps = 73/394 (18%)

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELR-------SRNLV---------------------- 415
           ++ +L+  Y  SG+ G  F +FD ++        +N +                      
Sbjct: 82  TFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRM 141

Query: 416 -------PTVVTYNTLIDGLCRYGDLEVAQQLKENMI--NQGILPDVITYTIMVNGSCKM 466
                   TV ++N++++ + + G    A +  E  +     I P+V+++ +++   CK+
Sbjct: 142 VDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKL 201

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G +  A E F EM  +  +PD F Y T + G  K     EA  L +EM  +G  P  +T+
Sbjct: 202 GLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTF 261

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           NVL++GLCK G +    +L+  M   G +P+ +TY +II+     G L +   L + M+ 
Sbjct: 262 NVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVA 321

Query: 587 KGLSPTLVTYTVLIHAHAARGR-----------------------------------LEL 611
               P  VTY  LI+    +GR                                    E 
Sbjct: 322 SKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEE 381

Query: 612 AFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
           A   + +M  KG +PN++ Y+ALI+GLCR  ++D+A  +  +M  +G  PN +TY+ LI 
Sbjct: 382 AMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIK 441

Query: 672 ENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
                GN Q+A+R++KEM      P+   +S L+
Sbjct: 442 GFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLI 475



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 3/114 (2%)

Query: 616 FSEMQVKG---IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
           F E  V G   I PNV+++N +I  +C+L  +D+A  +F +M  +   P+ +TY  L++ 
Sbjct: 173 FYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDG 232

Query: 673 NCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
            C      EA+ L  EM      P   T + L+     K   V   + ++++ L
Sbjct: 233 LCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFL 286


>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 790

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 172/678 (25%), Positives = 311/678 (45%), Gaps = 49/678 (7%)

Query: 52  PESESYYKEL---IISTVEEKPWAFCNNRWVSDHFQAVVSDPELLVRVLNRIREKPRIAL 108
           PE+ES    L   ++S + +  W   NN  +     A+       V  L  +   P  AL
Sbjct: 31  PEAESDPSHLPHHLLSILSKPNWQ--NNPSLKSLLPAITPSH---VSSLFSLNLDPHTAL 85

Query: 109 RFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVV--CVNMHGILDVL-IGG 165
           +F  W+   P  K +   + ++L ++    ++     ++ +++  C +    L V  I  
Sbjct: 86  QFSYWISQTPNFKHNVDSYASLLTLIDHHKIVSDVPKIIVSMIKCCYSAPDALFVSDICR 145

Query: 166 GLS----SCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDN 221
            +S    + +S+K  + LL +  +  +V++   ++ +ML   +  D+   N +I V    
Sbjct: 146 KMSKDDITKLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKM 205

Query: 222 GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY 281
           GF  +A++    M + G+ P   T  + +  +C+  ++  A  +  EM  R    N V+Y
Sbjct: 206 GFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNR----NEVSY 261

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
           N LI G    G +++A  L   M       + ++Y  +I G   K +  +A+ L +EM+ 
Sbjct: 262 NQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKNVH-KAMGLLDEMLE 320

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
           R + P L TYN LI G C+ G +  A      M  + ++PD  +Y   +   C+S  + E
Sbjct: 321 RNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEE 380

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           A  LFD L    +   V+ Y+ LIDG C+ G ++ A  L E M+++   P+  T+  +++
Sbjct: 381 ARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIH 440

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
           G C  GNL  A   F++M++ GL+P  + +   I   LK GD  +A++  ++M++ G  P
Sbjct: 441 GLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKP 500

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
              TYN  +   C  G ++EA +++ +M  +G  PD  TYTS+I A  ++G      D+ 
Sbjct: 501 VARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVL 560

Query: 582 NNMLRKGLSPTLVTYTVLI----------HAHAARG-------------------RLELA 612
            +M      P+  T+  LI                G                     ++ 
Sbjct: 561 KSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIV 620

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
              F EM+  G  P+   Y  LI+G+C++  +  A  L   M++EGI P++  +  +I+ 
Sbjct: 621 IELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISC 680

Query: 673 NCNAGNWQEALRLYKEML 690
            C    + EA  + ++M+
Sbjct: 681 CCKLQKYGEAANIVEDMI 698



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 140/435 (32%), Positives = 224/435 (51%), Gaps = 5/435 (1%)

Query: 281 YNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV 340
           YN L+T  +R G +++   L  +ML+  + +  +++N +I  Y + G + EA     +M+
Sbjct: 160 YNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMI 219

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
             G++P   T    I G C+   V  A   F EM  +N +    SYN L++G C +G I 
Sbjct: 220 QAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRNEV----SYNQLIHGLCEAGRID 275

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           EA  LF  ++     P V TY  LI GLCR  ++  A  L + M+ + ++PD+ITY  ++
Sbjct: 276 EAVSLFVRMKDDCCYPNVYTYTALIKGLCR-KNVHKAMGLLDEMLERNLVPDLITYNSLI 334

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
            G C+ G+L  A    + M  +GL PD+  Y   I    K     EA RL + +  +G  
Sbjct: 335 AGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVS 394

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
            ++I Y+VL+ G CK+G ++EA  L  KM+     P+  T+ ++IH     G+L+    L
Sbjct: 395 ANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSL 454

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
           F+ M++ GL PT+ T+ +LI     +G  + A     +M   G +P   TYNA I   C 
Sbjct: 455 FDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCS 514

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
             ++ +A  + + M+EEG+ P+ +TYT LI      G    A  + K M D + EP + T
Sbjct: 515 AGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHT 574

Query: 701 HSALLLKQLDKDYKV 715
             +L+ +  DK Y V
Sbjct: 575 FLSLIKQLFDKRYVV 589



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 126/479 (26%), Positives = 211/479 (44%), Gaps = 29/479 (6%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V + + + ++ML   L+PD+   N +I      G    A  +  +M E G+ P   TY  
Sbjct: 308 VHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGC 367

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
            +D  CK   ++EA  L   +   G S N + Y+VLI G+ + G++++A  L   ML   
Sbjct: 368 FIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKN 427

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
              +A+++N +I G    G L EAL+L ++MV  G+ PT+ T+NILI  + K G   DA 
Sbjct: 428 CSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAH 487

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               +M+     P   +YN  +  YC +G + EA  +  +++   + P   TY +LI   
Sbjct: 488 KCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAY 547

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVN--------------------------- 461
            + G    A  + ++M +    P   T+  ++                            
Sbjct: 548 GKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVP 607

Query: 462 GS--CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           GS   KM    +  E F EM + G  PD   Y   I+G  K+ +   A +L ++M  +G 
Sbjct: 608 GSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGI 667

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
            P  + +N ++   CKL    EA  ++  M+  G  P      ++I    E G+  RG  
Sbjct: 668 SPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNS 727

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           +F  +   G +   + + +LI     +G +E     F EM+  G   +  TY+ L   L
Sbjct: 728 VFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQKL 786


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 145/486 (29%), Positives = 253/486 (52%), Gaps = 3/486 (0%)

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
           ++ + N  LD  C+    QEAL L      R C PN  TY +LI GFS  G+L+ A  L+
Sbjct: 21  NVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLL 80

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
            +M   G + +A  +  ++ G  + G +VEAL     M  +  AP + TY  L++ LCK 
Sbjct: 81  EEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMA-KDCAPDVMTYTALVHALCKA 139

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           G+  +A+    EM+ +   PD ++++TL+ G C+ G+  +AF + +++  R +  +   +
Sbjct: 140 GKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAF 199

Query: 422 NTLIDGLC-RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
            T+I  LC +Y  +E+A ++   +I +G  P V+ + +++NG CK  +L  A +    M+
Sbjct: 200 ETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMI 259

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            KG  P+ F +T  I G  K     EA +L E+M+  G  P+++TY+ +++GLCK G ++
Sbjct: 260 EKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVD 319

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           +A EL + M      P+ +T+  +I    +   +   R L++ M   G +P ++TY  LI
Sbjct: 320 DAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLI 379

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRP-NVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
                  +++ AF  F  +   G+   N +TY+ L +G   L R+  A  +F  + ++G 
Sbjct: 380 DGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGF 439

Query: 660 LPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVE 719
            P+  TYT LI E C      E + L +EM  +   P   T SA+L    + ++   A++
Sbjct: 440 SPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQ 499

Query: 720 YLESLT 725
             +S+ 
Sbjct: 500 LFDSMA 505



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 176/642 (27%), Positives = 293/642 (45%), Gaps = 63/642 (9%)

Query: 102 EKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETV---VCVNMHGI 158
           +KP + L FF W  ++ G   + F     L++L      + A  +       +C+     
Sbjct: 2   DKPELVLLFFDWARSRVG--HNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFT 59

Query: 159 LDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL 218
             +LI G  SS   + I  + LL   K S  E   +V   +++                L
Sbjct: 60  YGILIRG-FSSAGDLDIA-IQLLEEMKSSGFEGNAVVHTTLMKG---------------L 102

Query: 219 RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNG 278
            D G  V+A E +R M +    P ++TY  ++ + CK G+  EA  +L EM  +GC+P+ 
Sbjct: 103 CDAGRVVEALEHFRAMAK-DCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDT 161

Query: 279 VTYNVLITGFSRNGELEQARGLIRDMLKLGLK---------------------------- 310
           VT++ LI G  + G  EQA  ++ D+++ G+                             
Sbjct: 162 VTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLG 221

Query: 311 -VSAHSYNP-------IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            V A  + P       +I G+ +   L  A  L E M+ +G  P + T+ ILI GLCK  
Sbjct: 222 VVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKAN 281

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           RV +A+    +M+     P++++Y+T++ G C+ G + +A+ LF  +  RN  P VVT+N
Sbjct: 282 RVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHN 341

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            LIDGLC+   +E A+QL   M   G  PD+ITY  +++G CK   +  A + F  +   
Sbjct: 342 ILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPES 401

Query: 483 GLQ-PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
           G+   +   Y+T   G   LG  ++A R+   ++ KGF PDL TY  L+   CK     E
Sbjct: 402 GVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVE 461

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
             EL+ +M   GF P   T ++++    E     R   LF++M  +G +   + Y +++ 
Sbjct: 462 VVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVE 521

Query: 602 AHAARGRLELAFMYFSEMQVKGIR---PNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
             A   + + A     ++  K  R   P+    +AL+  LC++ + D A  L   M E G
Sbjct: 522 GMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERG 581

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
                 +Y  L++       W EA ++++ M+     P+  T
Sbjct: 582 FAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEIST 623



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 147/520 (28%), Positives = 253/520 (48%), Gaps = 5/520 (0%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK-AREVYRMMGEFGIKPSIVTYNT 248
           EQ   V   +++ G+         II+ L +   SV+ A +V  ++   G  P+++ +N 
Sbjct: 178 EQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNL 237

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++ FCK  ++  A +LL  M  +GC PN  T+ +LITG  +   + +A+ L+  M+  G
Sbjct: 238 VINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGG 297

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
              +  +Y+ +I G  ++G + +A  L + M  R   P + T+NILI GLCK  R+ +AR
Sbjct: 298 CSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEAR 357

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL-VPTVVTYNTLIDG 427
             +  M      PDII+YN+L+ G C+S  + EAF LF  +    +     VTY+TL  G
Sbjct: 358 QLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHG 417

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
               G +  A ++   ++++G  PD+ TYT ++   CK        E   EM  KG  P 
Sbjct: 418 YAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPR 477

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
               +  + G  +   T  A +L + M A+G   D + YN++V G+ +    ++A  +L 
Sbjct: 478 VNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLE 537

Query: 548 KMVGD---GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           +++      F P      +++ +  ++G     + L + M  +G +  + +Y  L+   +
Sbjct: 538 QVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLS 597

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
              R + A   F  M   G  P + T N +I+ LC   ++D AY L   M + G  P+  
Sbjct: 598 RLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIE 657

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
           T   LI   C +G    A +L +EM +  +EP+  TH  L
Sbjct: 658 TCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 697



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/380 (30%), Positives = 178/380 (46%), Gaps = 36/380 (9%)

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
           FF+  R  V  ++ S N  L   CR     EA  LF    +R  +P   TY  LI G   
Sbjct: 10  FFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSS 69

Query: 431 YGDLEVAQQLKENMINQGI----------------------------------LPDVITY 456
            GDL++A QL E M + G                                    PDV+TY
Sbjct: 70  AGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKDCAPDVMTY 129

Query: 457 TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA 516
           T +V+  CK G    A+    EM+ +G  PD   ++T I G  K G   +A+R+ E+++ 
Sbjct: 130 TALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQ 189

Query: 517 KGFPPDLITYNVLVHGLC-KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLR 575
           +G       +  ++  LC K  S+E A+++L  ++  GF P  + +  +I+   +  DL 
Sbjct: 190 RGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLD 249

Query: 576 RGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALI 635
               L   M+ KG  P + T+T+LI       R+  A     +M + G  PNV+TY+ +I
Sbjct: 250 SAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVI 309

Query: 636 NGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIE 695
           NGLC+  ++D AY LF  ME     PN  T+ ILI+  C A   +EA +LY  M +    
Sbjct: 310 NGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCA 369

Query: 696 PDYCTHSALLLKQLDKDYKV 715
           PD  T+++ L+  L K ++V
Sbjct: 370 PDIITYNS-LIDGLCKSFQV 388



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/451 (26%), Positives = 220/451 (48%), Gaps = 8/451 (1%)

Query: 154 NMHGILDVLIGGGLSSCV-SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCN 212
           + + +L+V+I  G   CV ++    +L+    K + V +   +  KM+  G  P+V   +
Sbjct: 250 SAYKLLEVMIEKG---CVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYS 306

Query: 213 RIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR 272
            +I  L   G    A E++++M      P++VT+N ++D  CK   ++EA +L   M+  
Sbjct: 307 TVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRET 366

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS-AHSYNPIICGYSEKGLLVE 331
           GC+P+ +TYN LI G  ++ ++++A  L + + + G+  + A +Y+ +  GY+  G + +
Sbjct: 367 GCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMAD 426

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
           A  +   +V +G +P LATY  LI   CK  R  +      EM  K   P + + + +L 
Sbjct: 427 ACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLG 486

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ---G 448
           G     +   A  LFD + +R      + YN +++G+ R    + A  + E +I++    
Sbjct: 487 GLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRK 546

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
             P       +V   C++G    A++  ++M  +G      +Y   ++G  +L    EA 
Sbjct: 547 FNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEAT 606

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
           ++ E M++ G  P++ T NV++  LC    +++A EL+++M   G  PD  T  ++I   
Sbjct: 607 QVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGY 666

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
            + G     R L   M   GL P   T+ +L
Sbjct: 667 CKSGRADLARKLLEEMTEAGLEPNDTTHDLL 697



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 122/266 (45%), Gaps = 2/266 (0%)

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
           C++     A   F   + +   P++F Y   I G    GD   A +L EEM + GF  + 
Sbjct: 33  CRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNA 92

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
           + +  L+ GLC  G + EA E  R M  D   PD +TYT+++HA  + G     + +   
Sbjct: 93  VVHTTLMKGLCDAGRVVEALEHFRAMAKD-CAPDVMTYTALVHALCKAGKFDEAQGMLRE 151

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC-RLR 642
           M+ +G +P  VT++ LI      G  E AF    ++  +G+  +   +  +I  LC +  
Sbjct: 152 MVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYN 211

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
            ++ A  +   +  +G  P    + ++IN  C A +   A +L + M+++   P+  T +
Sbjct: 212 SVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFT 271

Query: 703 ALLLKQLDKDYKVHAVEYLESLTLGA 728
            L+      +    A + LE + +G 
Sbjct: 272 ILITGLCKANRVGEAQQLLEKMVMGG 297



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 64/127 (50%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           + +KM   G    V + NR++  L       +A +V+  M   G  P I T N ++   C
Sbjct: 573 LLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLC 632

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
              ++ +A EL+  M   GC P+  T N LI G+ ++G  + AR L+ +M + GL+ +  
Sbjct: 633 SAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDT 692

Query: 315 SYNPIIC 321
           +++ + C
Sbjct: 693 THDLLEC 699


>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
 gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
          Length = 694

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 167/608 (27%), Positives = 286/608 (47%), Gaps = 50/608 (8%)

Query: 99  RIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGI 158
           +  + P+ AL  F     QPG      +F  IL  L +  L+     +VE +        
Sbjct: 18  KAEKSPKSALALFDSASRQPGYTHSPHIFLLILRRLSDPKLVVHVTRIVELIKTQKCKCT 77

Query: 159 LDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL 218
            DV++               +L  Y K  M  + L  F KM                   
Sbjct: 78  EDVVL--------------TVLKAYAKSKMPNEALDCFQKM------------------- 104

Query: 219 RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNG 278
                     E+      FG KP I +YN +L++F +   +++A   L   +  G  PN 
Sbjct: 105 ---------EEI------FGCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNL 149

Query: 279 VTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
            TYN+LI    +  +  +A+GL+  M    LK   +SY  +I G  + G LV AL + +E
Sbjct: 150 QTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDE 209

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN-VIPDIISYNTLLYGYCRSG 397
           M  RG+ P +  YNI+I G  K G     +  +  +++ + V P++++YN ++ G C+ G
Sbjct: 210 MFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMG 269

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
              E+  +++ ++       + TY++LI GLC  G+++ A ++ + M+ + ++ DV+TY 
Sbjct: 270 RFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYN 329

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
            ++NG C+ G +  + E +  M ++    +  +Y   I G  +     EA  + E +  +
Sbjct: 330 ALLNGFCRAGKIKESFELWVMMGKENCH-NVVSYNIFIRGLFENRKVEEAISVWELLRRR 388

Query: 518 GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
           G   D  TY VL+HGLCK G L +A ++L++    G   D   Y+SI+    + G +   
Sbjct: 389 GSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEA 448

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
             + + M + G   +      LI+      +LE A  +F EM+ KG  P V++YN LING
Sbjct: 449 LGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLING 508

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           LC+  R   AY    +M E+   P+  TY++L++  C       AL L++++L + +EPD
Sbjct: 509 LCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPD 568

Query: 698 YCTHSALL 705
              H+ L+
Sbjct: 569 VTMHNILM 576



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 167/602 (27%), Positives = 292/602 (48%), Gaps = 24/602 (3%)

Query: 104 PRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVV---ETVVCVNMHGILD 160
           P  AL  F+ +E   G K     +  +L   IE+ LL  A   +   ETV      GIL 
Sbjct: 94  PNEALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAESFLAYFETV------GILP 147

Query: 161 VLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRD 220
                      +++  ++L+ I  KK    +   + + M    L PDV +   +I  +  
Sbjct: 148 -----------NLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVK 196

Query: 221 NGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWE--MQGRGCSPNG 278
           +G  V A EV+  M E G+ P ++ YN M+D F K G+  +  E+ WE  ++G    PN 
Sbjct: 197 SGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEI-WERLVKGSCVYPNV 255

Query: 279 VTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
           VTYNV+I G  + G  +++  +   M K   ++   +Y+ +ICG  + G +  A+ + +E
Sbjct: 256 VTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKE 315

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
           MV R V   + TYN L+ G C+ G++ ++    + M+ K    +++SYN  + G   +  
Sbjct: 316 MVKRSVVVDVVTYNALLNGFCRAGKIKES-FELWVMMGKENCHNVVSYNIFIRGLFENRK 374

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           + EA  +++ LR R       TY  LI GLC+ G L  A ++ +   + G   D   Y+ 
Sbjct: 375 VEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSS 434

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           +V+G  K G +  A    ++M + G +         I G ++     EA     EM  KG
Sbjct: 435 IVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKG 494

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
             P +++YN L++GLCK     +A   +++M+   + PD ITY+ ++    +   +    
Sbjct: 495 CSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMAL 554

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           +L+  +L KGL P +  + +L+H   + G++E A + +S M+     PN++T+N L++GL
Sbjct: 555 NLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGL 614

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
            + R  + A  ++  M + G  P+  +Y I +   C+ G   + + L+ + L   I P  
Sbjct: 615 YKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTS 674

Query: 699 CT 700
            T
Sbjct: 675 IT 676



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 158/558 (28%), Positives = 270/558 (48%), Gaps = 34/558 (6%)

Query: 82  HFQAVVSDPELLV-RVLNRIREKPRI---ALRFFRWVETQPGVKRDEFVFCTILEILIES 137
           +F+ V   P L    +L +I  K R    A     W+ ++  +K D + + T++  +++S
Sbjct: 139 YFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKD-LKPDVYSYGTVINGMVKS 197

Query: 138 GLLRSAYWV---------VETVVCVNM--------------HGILDVLIGGGLSSCVSIK 174
           G L SA  V         V  V+C N+                I + L+ G   SCV   
Sbjct: 198 GDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKG---SCVYPN 254

Query: 175 ILDLLLLI--YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR 232
           ++   ++I    K    ++ L ++ +M +N    D+   + +I  L D G    A EVY+
Sbjct: 255 VVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYK 314

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
            M +  +   +VTYN +L+ FC+ G+++E+ EL W M G+    N V+YN+ I G   N 
Sbjct: 315 EMVKRSVVVDVVTYNALLNGFCRAGKIKESFEL-WVMMGKENCHNVVSYNIFIRGLFENR 373

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
           ++E+A  +   + + G    + +Y  +I G  + G L +AL + +E    G       Y+
Sbjct: 374 KVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYS 433

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
            ++ GL K GRV +A     +M +          N L+ G+ R+  + EA   F E+ ++
Sbjct: 434 SIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETK 493

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
              PTVV+YNTLI+GLC+      A    + M+ +   PD+ITY+++++G C+   + MA
Sbjct: 494 GCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMA 553

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
              + ++L KGL+PD   +   + G    G   +A  L   M      P+L+T+N L+ G
Sbjct: 554 LNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDG 613

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           L K    E A+ +   M  +GF PD I+Y   +      G +  G  LF++ L+ G+ PT
Sbjct: 614 LYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPT 673

Query: 593 LVTYTVLIHAHAARGRLE 610
            +T+ +L+ A    G L+
Sbjct: 674 SITWYILVRAVLKLGPLD 691



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 103/217 (47%), Gaps = 7/217 (3%)

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           + ++  EE+   G  P + +YN L++   +   LE+A   L      G +P+  TY  +I
Sbjct: 99  DCFQKMEEIF--GCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILI 156

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
             S++       + L + M  K L P + +Y  +I+     G L  A   F EM  +G+ 
Sbjct: 157 KISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLV 216

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFID---MEEEGILPNKYTYTILINENCNAGNWQEA 682
           P+V+ YN +I+G    +R D   G  I    ++   + PN  TY ++IN  C  G + E+
Sbjct: 217 PDVMCYNIMIDGF--FKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDES 274

Query: 683 LRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVE 719
           L +++ M   E E D  T+S+L+    D      AVE
Sbjct: 275 LEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVE 311



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 68/141 (48%)

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
           G  P + +Y  L++A      LE A  + +  +  GI PN+ TYN LI    + R+  +A
Sbjct: 109 GCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEA 168

Query: 648 YGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLK 707
            GL   M  + + P+ Y+Y  +IN    +G+   AL ++ EM +R + PD   ++ ++  
Sbjct: 169 KGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDG 228

Query: 708 QLDKDYKVHAVEYLESLTLGA 728
              +   V   E  E L  G+
Sbjct: 229 FFKRGDYVQGKEIWERLVKGS 249



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 2/132 (1%)

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQ-VKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
           V  TVL  A+A       A   F +M+ + G +P + +YNAL+N       +++A     
Sbjct: 80  VVLTVL-KAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAESFLA 138

Query: 653 DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
             E  GILPN  TY ILI  +     + EA  L   M  ++++PD  ++  ++   +   
Sbjct: 139 YFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSG 198

Query: 713 YKVHAVEYLESL 724
             V A+E  + +
Sbjct: 199 DLVSALEVFDEM 210


>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g07290, mitochondrial; Flags: Precursor
 gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
 gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 880

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 178/637 (27%), Positives = 293/637 (45%), Gaps = 64/637 (10%)

Query: 89  DPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVE 148
           +P +  +V++  R    I +RFF WV        D      +L++++ SGL R A+ V+ 
Sbjct: 68  NPNVASQVISLQRSDNDICVRFFMWVCKHSSYCFDPTQKNQLLKLIVSSGLYRVAHAVIV 127

Query: 149 TVV-----C----VNMHGILDVL---IGGGL------SSCVSIKILDLLLLIYTKKSMVE 190
            ++     C    + +    D L    G  L      S  +S+  LDL  L Y       
Sbjct: 128 ALIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAY------- 180

Query: 191 QCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTML 250
              + + +M  +G +  + +   I+  L  NG++  A      + + G         ++L
Sbjct: 181 ---VTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLL 237

Query: 251 DSFCKEGEMQEALELLWEMQGR-GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
             FC+   +++AL++   M     C+PN V+Y++LI G    G LE+A GL   M + G 
Sbjct: 238 LGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGC 297

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
           + S  +Y  +I    ++GL+ +A NL +EM+ RG  P + TY +LI GLC+ G++ +A  
Sbjct: 298 QPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANG 357

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR----------------- 412
              +M++  + P +I+YN L+ GYC+ G +  AF L   +  R                 
Sbjct: 358 VCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLC 417

Query: 413 ------------------NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
                              L P +V+YN LIDGLCR G +  A +L  +M    I PD +
Sbjct: 418 RVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCL 477

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
           T+T ++N  CK G   +A  F   MLRKG+  D    TT I G  K+G T +A  + E +
Sbjct: 478 TFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETL 537

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
           +         + NV++  L K   ++E   +L K+   G +P  +TYT+++   +  GD+
Sbjct: 538 VKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDI 597

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
                +   M   G  P +  YT++I+     GR+E A    S MQ  G+ PN +TY  +
Sbjct: 598 TGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVM 657

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
           + G     ++D+A      M E G   N   Y+ L+ 
Sbjct: 658 VKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQ 694



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 155/506 (30%), Positives = 238/506 (47%), Gaps = 38/506 (7%)

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
           FG + +   Y+++L S  K      A      M+  G     + Y  ++    +NG  E 
Sbjct: 154 FGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEA 213

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR-GVAPTLATYNILI 355
           A   +  +LK+G  + +H    ++ G+     L +AL + + M      AP   +Y+ILI
Sbjct: 214 AEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILI 273

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
           +GLC+ GR+ +A     +M  K   P   +Y  L+   C  G I +AF LFDE+  R   
Sbjct: 274 HGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCK 333

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P V TY  LIDGLCR G +E A  +   M+   I P VITY  ++NG CK G +  A E 
Sbjct: 334 PNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFEL 393

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
              M ++  +P+   +   + G  ++G   +A  L + ML  G  PD+++YNVL+ GLC+
Sbjct: 394 LTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCR 453

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
            G +  A +LL  M      PD +T+T+II+A  + G           MLRKG+S   VT
Sbjct: 454 EGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVT 513

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVK--------------------------------- 622
            T LI      G+   A ++  E  VK                                 
Sbjct: 514 GTTLIDGVCKVGKTRDA-LFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKI 572

Query: 623 ---GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
              G+ P+V+TY  L++GL R   I  ++ +   M+  G LPN Y YTI+IN  C  G  
Sbjct: 573 NKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRV 632

Query: 680 QEALRLYKEMLDREIEPDYCTHSALL 705
           +EA +L   M D  + P++ T++ ++
Sbjct: 633 EEAEKLLSAMQDSGVSPNHVTYTVMV 658



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 132/518 (25%), Positives = 234/518 (45%), Gaps = 54/518 (10%)

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           MGE G +PS  TY  ++ + C  G + +A  L  EM  RGC PN  TY VLI G  R+G+
Sbjct: 292 MGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGK 351

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLV----------------------- 330
           +E+A G+ R M+K  +  S  +YN +I GY + G +V                       
Sbjct: 352 IEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNE 411

Query: 331 ------------EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
                       +A++L + M+  G++P + +YN+LI GLC+ G ++ A      M   +
Sbjct: 412 LMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFD 471

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
           + PD +++  ++  +C+ G    A      +  + +    VT  TLIDG+C+ G    A 
Sbjct: 472 IEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDAL 531

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
            + E ++   IL    +  ++++   K   +        ++ + GL P    YTT + G 
Sbjct: 532 FILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGL 591

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
           ++ GD + ++R+ E M   G  P++  Y ++++GLC+ G +EEA +LL  M   G  P+H
Sbjct: 592 IRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNH 651

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH--AARGRLELAFMYF 616
           +TYT ++   +  G L R  +    M+ +G       Y+ L+     + +G         
Sbjct: 652 VTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTV 711

Query: 617 SEMQVKGIRPNVIT--------YNALING--------LCRLRRIDQAYGLFIDMEEEGIL 660
           S++ ++   P  I             I+G        LC+  R D++  L  ++ E G+ 
Sbjct: 712 SDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVF 771

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
             K    I++   C+     + + L   +L     P +
Sbjct: 772 LEK-AMDIIMESYCSKKKHTKCMELITLVLKSGFVPSF 808



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 93/416 (22%), Positives = 184/416 (44%), Gaps = 41/416 (9%)

Query: 111 FRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSC 170
           F  +  + G+  DE    T+++ + + G  R A +++ET+V + +           L++ 
Sbjct: 498 FLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRI-----------LTTP 546

Query: 171 VSIK-ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE 229
            S+  ILD+L    +K   V++ L +  K+ + GL+P V     ++  L  +G    +  
Sbjct: 547 HSLNVILDML----SKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFR 602

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           +  +M   G  P++  Y  +++  C+ G ++EA +LL  MQ  G SPN VTY V++ G+ 
Sbjct: 603 ILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYV 662

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGY--SEKGLLVEALNLEEEMVTRGVAPT 347
            NG+L++A   +R M++ G +++   Y+ ++ G+  S+KG+     +   ++  R   P 
Sbjct: 663 NNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDP- 721

Query: 348 LATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFD 407
               N LI  + + G        F                 L+   C+ G   E+  L  
Sbjct: 722 -ECINELISVVEQLGGCISGLCIF-----------------LVTRLCKEGRTDESNDLVQ 763

Query: 408 ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG 467
            +  R  V      + +++  C         +L   ++  G +P   ++ +++ G  K G
Sbjct: 764 NVLERG-VFLEKAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEG 822

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL---KLGDTSEAYRLQEEMLAKGFP 520
           +   ARE   E+L      ++    T +   +   + GD SE   L +++  +  P
Sbjct: 823 DAERARELVMELLTSNGVVEKSGVLTYVECLMEGDETGDCSEVIDLVDQLHCRERP 878


>gi|449511130|ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 847

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 168/620 (27%), Positives = 291/620 (46%), Gaps = 37/620 (5%)

Query: 93  LVRVLNRIR--------EKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAY 144
           LVR LN ++        E  R ALRFF W +     + D  V+  +LEIL ++ L     
Sbjct: 207 LVRSLNPLQVCAVLLSQEDERNALRFFYWADRLWRYRHDSSVYLVMLEILSKTKL----- 261

Query: 145 WVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGL 204
                  C     IL ++    +  C   +    +++ Y++   +   + V   M + G+
Sbjct: 262 -------CQGAKRILRLMTRRRIQLCP--EAFGFVMVSYSRAGRLRDAMKVLTLMQKAGV 312

Query: 205 LPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALE 264
            P++  CN  I +L       KA      M   GI P++VTYN ++  +C   ++ +A+E
Sbjct: 313 EPNLSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVVTYNCLIKGYCNVHQVDQAME 372

Query: 265 LLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH-SYNPIICGY 323
           L+ +M  +GCSP+ V+Y  ++    R+  L + R LI+ M      +  H +YN +I   
Sbjct: 373 LIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPDHVTYNSLIQML 432

Query: 324 SEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
           S+ G   EAL + +E            Y+ +++  CK G++  A+    EM  K   PD+
Sbjct: 433 SKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSKGCDPDV 492

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
           ++Y ++L G+CR G + +A  +  ++   +  P  VTY T ++GLCR G    A+++   
Sbjct: 493 VTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGKSLEARKMMNM 552

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
              +   P+ ITY+++V+G  + G L+ A +   EM+ KG  P+       +    + G 
Sbjct: 553 SEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLVHSLCRDGK 612

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
             EA +L +E + KG   +++ +  ++HG C+   LE A  LL  M      PD +TYT+
Sbjct: 613 PREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKHPDTVTYTA 672

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE------LAFMYFS 617
           +I A  +   +    +L   MLR+GL P+ VTY  +IH +  +GR+E         +  S
Sbjct: 673 LIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVEDLLKLLKKMLLKS 732

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
             Q          YN +I  LC+   +++A  L  ++       +  T  +L+    N G
Sbjct: 733 RFQT--------AYNLVIEKLCKFGYLEEANSLLGEVLRTASRTDAKTCHVLMESYLNVG 784

Query: 678 NWQEALRLYKEMLDREIEPD 697
               A ++   M +R + PD
Sbjct: 785 IPMSAYKVACRMFNRNLIPD 804



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 126/412 (30%), Positives = 208/412 (50%), Gaps = 8/412 (1%)

Query: 204 LLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEAL 263
           LLPD    N +I++L  +G   +A E+ +   +   K   V Y+ ++ ++CKEG++Q+A 
Sbjct: 418 LLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAK 477

Query: 264 ELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGY 323
           EL+ EM  +GC P+ VTY  ++ GF R G+L+QA+ +++ M K   K +A +Y   + G 
Sbjct: 478 ELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGL 537

Query: 324 SEKGLLVEA---LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
              G  +EA   +N+ EE       P   TY+++++GL + G++++A     EM+ K   
Sbjct: 538 CRNGKSLEARKMMNMSEE---EWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFF 594

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           P+ +  N L++  CR G   EA  L  E  ++     VV + T+I G C+  DLE A  L
Sbjct: 595 PNPVEINLLVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSL 654

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
            ++M      PD +TYT +++   K   +  A E   +MLR+GL P    Y + I    +
Sbjct: 655 LDDMYLCNKHPDTVTYTALIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCR 714

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
            G   +  +L ++ML K        YN+++  LCK G LEEAN LL +++      D  T
Sbjct: 715 KGRVEDLLKLLKKMLLKSRFQ--TAYNLVIEKLCKFGYLEEANSLLGEVLRTASRTDAKT 772

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
              ++ + L +G       +   M  + L P L     +       G+LE A
Sbjct: 773 CHVLMESYLNVGIPMSAYKVACRMFNRNLIPDLKLCEKVSKRLVVEGKLEEA 824



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 172/371 (46%), Gaps = 37/371 (9%)

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           KA+E+   M   G  P +VTY ++LD FC+ G++ +A +++ +M    C PN VTY   +
Sbjct: 475 KAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFL 534

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            G  RNG+  +AR ++    +     +A +Y+ ++ G   +G L EA ++  EM+ +G  
Sbjct: 535 NGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFF 594

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P     N+L++ LC+ G+  +A     E + K    +++++ T+++G+C+  ++  A  L
Sbjct: 595 PNPVEINLLVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSL 654

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY--------- 456
            D++   N  P  VTY  LID L +   +E A +L   M+ QG++P  +TY         
Sbjct: 655 LDDMYLCNKHPDTVTYTALIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCR 714

Query: 457 ------------------------TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
                                    +++   CK G L  A     E+LR   + D     
Sbjct: 715 KGRVEDLLKLLKKMLLKSRFQTAYNLVIEKLCKFGYLEEANSLLGEVLRTASRTDAKTCH 774

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
             +   L +G    AY++   M  +   PDL     +   L   G LEEA+ L+ + V  
Sbjct: 775 VLMESYLNVGIPMSAYKVACRMFNRNLIPDLKLCEKVSKRLVVEGKLEEADRLVLRFVER 834

Query: 553 GFI----PDHI 559
           G +    P H+
Sbjct: 835 GHVSAQEPKHL 845


>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g12100, mitochondrial; Flags: Precursor
 gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
 gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
 gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
 gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 816

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 161/529 (30%), Positives = 273/529 (51%), Gaps = 5/529 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F++ML   LLP +   N +I      G   K+ +V   M    I+PS++T+NT+L    
Sbjct: 236 LFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLF 295

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K G +++A  +L EM+  G  P+  T+++L  G+S N + E A G+    +  G+K++A+
Sbjct: 296 KAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAY 355

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           + + ++    ++G + +A  +    + +G+ P    YN +I G C+ G +  AR +   M
Sbjct: 356 TCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAM 415

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
            ++ + PD ++YN L+  +C  G +  A    ++++ + + P+V TYN LI G  R  + 
Sbjct: 416 EKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEF 475

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           +    + + M + G +P+V++Y  ++N  CK   L  A+    +M  +G+ P    Y   
Sbjct: 476 DKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNML 535

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I G    G   +A+R  +EML KG   +L+TYN L+ GL   G L EA +LL ++   G 
Sbjct: 536 IDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGL 595

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            PD  TY S+I      G+++R   L+  M R G+ PTL TY +LI      G +EL   
Sbjct: 596 KPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTER 654

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F EM +K   P+++ YN +++       +++A+ L   M E+ I  +K TY  LI    
Sbjct: 655 LFGEMSLK---PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQL 711

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLD-KDYKVHAVEYLE 722
             G   E   L  EM  RE+EP+  T++ ++    + KDY    V Y E
Sbjct: 712 KVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYRE 760



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 146/529 (27%), Positives = 269/529 (50%), Gaps = 2/529 (0%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK-VLRDNGFSVKAREVYRMMGE 236
           LL ++  +  M+ +   +F  +   G+ P   +   ++  +++   F V    V+  + E
Sbjct: 114 LLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTIN-VFLNILE 172

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
              +PS   Y   + +  K  ++ + LEL   M+     P+   YNVLI G  +   +  
Sbjct: 173 SDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMND 232

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  L  +ML   L  S  +YN +I GY + G   ++  + E M    + P+L T+N L+ 
Sbjct: 233 AEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLK 292

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           GL K G V DA +   EM     +PD  +++ L  GY  +     A  +++      +  
Sbjct: 293 GLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKM 352

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
              T + L++ LC+ G +E A+++    + +G++P+ + Y  M++G C+ G+L  AR   
Sbjct: 353 NAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKI 412

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
             M ++G++PD  AY   I    +LG+   A +   +M  KG  P + TYN+L+ G  + 
Sbjct: 413 EAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRK 472

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
              ++  ++L++M  +G +P+ ++Y ++I+   +   L   + +  +M  +G+SP +  Y
Sbjct: 473 YEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIY 532

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
            +LI    ++G++E AF +  EM  KGI  N++TYN LI+GL    ++ +A  L +++  
Sbjct: 533 NMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISR 592

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +G+ P+ +TY  LI+    AGN Q  + LY+EM    I+P   T+  L+
Sbjct: 593 KGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI 641



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 146/485 (30%), Positives = 231/485 (47%), Gaps = 31/485 (6%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K  MVE    V  +M   G +PD    + +      N  +  A  VY    + G+K +  
Sbjct: 296 KAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAY 355

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           T + +L++ CKEG++++A E+L     +G  PN V YN +I G+ R G+L  AR  I  M
Sbjct: 356 TCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAM 415

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
            K G+K    +YN +I  + E G +  A     +M  +GV+P++ TYNILI G  +    
Sbjct: 416 EKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEF 475

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
                   EM     +P+++SY TL+   C+   + EA ++  ++  R + P V  YN L
Sbjct: 476 DKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNML 535

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           IDG C  G +E A +  + M+ +GI  +++TY  +++G    G LS A +   E+ RKGL
Sbjct: 536 IDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGL 595

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG-------------------------- 518
           +PD F Y + I+G    G+      L EEM   G                          
Sbjct: 596 KPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERL 655

Query: 519 -----FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
                  PDL+ YN ++H     G +E+A  L ++M+      D  TY S+I   L++G 
Sbjct: 656 FGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGK 715

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
           L   R L + M  + + P   TY +++  H        A++++ EMQ KG   +V   N 
Sbjct: 716 LCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNE 775

Query: 634 LINGL 638
           L++GL
Sbjct: 776 LVSGL 780



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 198/416 (47%), Gaps = 37/416 (8%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y +K  +    +    M + G+ PD    N +I+   + G    A +    M   G+ PS
Sbjct: 399 YCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPS 458

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           + TYN ++  + ++ E  +  ++L EM+  G  PN V+Y  LI    +  +L +A+ + R
Sbjct: 459 VETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKR 518

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           DM   G+      YN +I G   KG + +A    +EM+ +G+   L TYN LI GL   G
Sbjct: 519 DMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTG 578

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           ++S+A     E+ RK + PD+ +YN+L+ GY  +GN+     L++E++   + PT+ TY+
Sbjct: 579 KLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYH 638

Query: 423 TLIDGLCR--------------------------------YGDLEVAQQLKENMINQGIL 450
            LI  LC                                 +GD+E A  L++ MI + I 
Sbjct: 639 LLI-SLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIG 697

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
            D  TY  ++ G  K+G L   R   +EM  + ++P+   Y   + G  ++ D   AY  
Sbjct: 698 LDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVW 757

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA----NELLRKMVGDGFIPDHITYT 562
             EM  KGF  D+   N LV GL +    +EA    +E+  +M+GD  + + ++ T
Sbjct: 758 YREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGRMLGDVTVDEDLSAT 813


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 142/466 (30%), Positives = 239/466 (51%), Gaps = 5/466 (1%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRN-GLLPDVKNCNRIIKVLRDNGFSVKAREVYR--MM 234
           L+   Y K  + E+ + +F +M+        V++ N ++ V+   G   +A E Y   + 
Sbjct: 104 LVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVG 163

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
           G+  I P+++++N ++ + CK G +  A+E+  EM  + C P+  TY  L+ G  +   +
Sbjct: 164 GKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRI 223

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           ++A  L+ +M   G   S+ ++N +I G  +KG +V    L + M  +G  P   TYN +
Sbjct: 224 DEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTI 283

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           I GLC  G++  A      M+    +P+ ++Y TL+ G  + G   +   L   L  R  
Sbjct: 284 INGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGH 343

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
                 Y+TLI GL +    E A  L + M+ +G  P+++ Y+ +++G C+ G L  A+E
Sbjct: 344 HANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKE 403

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
              EM+ KG  P+ F Y++ I G  K G++ +A R+ +EM      P+ I Y+VL+HGLC
Sbjct: 404 ILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLC 463

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML--RKGLSPT 592
           + G L EA  +   M+G G  PD + Y+S+IH     G +  G  LFN ML       P 
Sbjct: 464 EDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPD 523

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           +VTY +L+ A   +  +  A    + M  +G  P++IT N  +N L
Sbjct: 524 VVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNAL 569



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 153/517 (29%), Positives = 257/517 (49%), Gaps = 42/517 (8%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMGEFGIKPSIVTYNTMLDSF 253
           VF++M R   +   KN   + +         KA E++ RM+ EF  + ++ ++N++L+  
Sbjct: 86  VFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVI 145

Query: 254 CKEGEMQEALELLWEMQGRG---CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
            +EG    ALE  +E    G    SPN +++N++I                + M KLGL 
Sbjct: 146 IQEGLFHRALEF-YECGVGGKTNISPNVLSFNLVI----------------KAMCKLGL- 187

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
                             +  A+ +  EM  +   P + TY  L+ GLCK  R+ +A   
Sbjct: 188 ------------------VDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLL 229

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
             EM  +   P  +++N L+ G C+ G++     L D +  +  VP  VTYNT+I+GLC 
Sbjct: 230 LDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCL 289

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
            G L+ A  L + M+    +P+ +TY  ++NG  K G         + +  +G   + +A
Sbjct: 290 KGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYA 349

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           Y+T I+G  K   + EA  L ++M+ KG  P+++ Y+ L+ GLC+ G L+EA E+L +MV
Sbjct: 350 YSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMV 409

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
             G  P+  TY+S+I    + G+ ++   ++  M +    P  + Y+VLIH     G+L 
Sbjct: 410 NKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLR 469

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM--EEEGILPNKYTYTI 668
            A M ++ M  +G+RP+V+ Y+++I+GLC    ++    LF +M  +E    P+  TY I
Sbjct: 470 EAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNI 529

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           L+   C   +   A+ L   MLDR   PD  T +  L
Sbjct: 530 LLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFL 566



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 145/467 (31%), Positives = 232/467 (49%), Gaps = 23/467 (4%)

Query: 201 RNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQ 260
           +  + P+V + N +IK +   G   +A EV+R M     +P + TY T++D  CKE  + 
Sbjct: 165 KTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRID 224

Query: 261 EALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII 320
           EA+ LL EMQ  GC P+ VT+NVLI G  + G++ +   L+ +M   G   +  +YN II
Sbjct: 225 EAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTII 284

Query: 321 CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
            G   KG L +A++L + MV     P   TY  LI GL K GR  D  H    +  +   
Sbjct: 285 NGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHH 344

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
            +  +Y+TL+ G  +     EA  L+ ++  +   P +V Y+ LIDGLCR G L+ A+++
Sbjct: 345 ANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEI 404

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
              M+N+G  P+  TY+ ++ G  K GN   A   + EM +    P+   Y+  I G  +
Sbjct: 405 LCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCE 464

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG--DGFIPDH 558
            G   EA  +   ML +G  PD++ Y+ ++HGLC  GS+E   +L  +M+       PD 
Sbjct: 465 DGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDV 524

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA---------------- 602
           +TY  ++ A  +   +    DL N+ML +G +P L+T  + ++A                
Sbjct: 525 VTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLD 584

Query: 603 -----HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRI 644
                   R R+  A      M  K + PN  T+  +I  LC+ +++
Sbjct: 585 ELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKV 631



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/417 (31%), Positives = 215/417 (51%), Gaps = 4/417 (0%)

Query: 312 SAHSYNPIICGYSEKGLLVEALNLEEEMV--TRGVAPTLATYNILIYGLCKWGRVSDARH 369
           +  S+N ++    ++GL   AL   E  V     ++P + ++N++I  +CK G V  A  
Sbjct: 134 TVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIE 193

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
            F EM  +   PD+ +Y TL+ G C+   I EA LL DE++     P+ VT+N LI+GLC
Sbjct: 194 VFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLC 253

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
           + GD+    +L +NM  +G +P+ +TY  ++NG C  G L  A    + M+     P+  
Sbjct: 254 KKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDV 313

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
            Y T I G +K G + +   L   +  +G   +   Y+ L+ GL K    EEA  L +KM
Sbjct: 314 TYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKM 373

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRL 609
           V  G  P+ + Y+++I      G L   +++   M+ KG +P   TY+ LI      G  
Sbjct: 374 VEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNS 433

Query: 610 ELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL 669
           + A   + EM      PN I Y+ LI+GLC   ++ +A  ++  M   G+ P+   Y+ +
Sbjct: 434 QKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSM 493

Query: 670 INENCNAGNWQEALRLYKEMLDREI--EPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           I+  CNAG+ +  L+L+ EML +E   +PD  T++ LL     ++   HA++ L S+
Sbjct: 494 IHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSM 550



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 105/394 (26%), Positives = 178/394 (45%), Gaps = 73/394 (18%)

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELR-------SRNLV---------------------- 415
           ++ +L+  Y  SG+ G  F +FD ++        +N +                      
Sbjct: 66  TFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRM 125

Query: 416 -------PTVVTYNTLIDGLCRYGDLEVAQQLKENMI--NQGILPDVITYTIMVNGSCKM 466
                   TV ++N++++ + + G    A +  E  +     I P+V+++ +++   CK+
Sbjct: 126 VDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKL 185

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G +  A E F EM  +  +PD F Y T + G  K     EA  L +EM  +G  P  +T+
Sbjct: 186 GLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTF 245

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           NVL++GLCK G +    +L+  M   G +P+ +TY +II+     G L +   L + M+ 
Sbjct: 246 NVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVA 305

Query: 587 KGLSPTLVTYTVLIHAHAARGR-----------------------------------LEL 611
               P  VTY  LI+    +GR                                    E 
Sbjct: 306 SKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEE 365

Query: 612 AFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
           A   + +M  KG +PN++ Y+ALI+GLCR  ++D+A  +  +M  +G  PN +TY+ LI 
Sbjct: 366 AMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIK 425

Query: 672 ENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
                GN Q+A+R++KEM      P+   +S L+
Sbjct: 426 GFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLI 459



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 3/114 (2%)

Query: 616 FSEMQVKG---IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
           F E  V G   I PNV+++N +I  +C+L  +D+A  +F +M  +   P+ +TY  L++ 
Sbjct: 157 FYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDG 216

Query: 673 NCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
            C      EA+ L  EM      P   T + L+     K   V   + ++++ L
Sbjct: 217 LCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFL 270


>gi|357155105|ref|XP_003577009.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13800-like [Brachypodium distachyon]
          Length = 821

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 185/742 (24%), Positives = 326/742 (43%), Gaps = 128/742 (17%)

Query: 90  PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVET 149
           P  +V+ L  ++ +P IA  +F+  E+  G + D   +  I+ IL  SG  R  + +   
Sbjct: 67  PANVVKTLQCLKRRPAIAFAYFKDAES-VGFRHDFSTYAEIVHILSHSGQGRMLFSLFCE 125

Query: 150 VVCVNMHG------ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNG 203
           +V     G      ++D L     +S   +   + L+   T        + +F ++ R G
Sbjct: 126 IVSPTSGGGPEIVPLMDQLKRTCTTSYPLLFATNCLITACTTCCDARDTIGLFGELCRLG 185

Query: 204 LLPDVKNCNRIIKVLRDNGFSV-----------------------------------KAR 228
           ++P V  CN ++K   ++  S                                    KA 
Sbjct: 186 VVPPVWTCNILLKFAAESCDSEIVLSAYDEMKFFRLTLDAHSLRIITRSLFQEKKADKAF 245

Query: 229 EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
           +V+  M E G+KP +  +++ +   C+ G++  A  +L E+         + +NV++ G 
Sbjct: 246 KVWVEMIEMGVKPDVHGHSSFIIGLCECGKIDLAYAILQEIIREKVQVEAIAFNVVMDGL 305

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
            +   LE+   L+ + ++ GL    + Y+ +I  Y + G L++ L+  + MV+ G+    
Sbjct: 306 CKEMRLEEVEKLLENKVRQGLTPDIYGYSYLIRSYCKVGNLLKVLDHYQAMVSHGLEANC 365

Query: 349 -----------------------------------ATYNILIYGLCKWGRVSDARHRFFE 373
                                                YNI +   CK G + +A     E
Sbjct: 366 HIMSYLLQCFTKLGMASQVTEYFQKFRDSGLHIDGVLYNIAMDAYCKLGNMDEAVKLLGE 425

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M+   + PD I Y  L+ GYC  G+I  A   F+E+   N+ P VVTYN L  GL + G 
Sbjct: 426 MMTVGLSPDRIHYTCLIKGYCLKGDIQNARQAFEEMLKANVKPDVVTYNILASGLSKRGL 485

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           +     L  +M ++G+ P+ +TY ++++G C+  NLS A   FN +  KG+      Y++
Sbjct: 486 VMEVFDLIGHMEDRGLQPNSLTYGVVIDGFCRGDNLSEAEVLFNIVEEKGIDNIEVLYSS 545

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            + G L  G T  AY L   +  +G   D  + + L+  LC+ G+ + A+ +   M+   
Sbjct: 546 MVCGYLHKGWTDNAYVLFLRVAKQGKLVDRFSCSKLISDLCRDGNSQGASTVCSTMLEKN 605

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
            +PD I+Y+ +I A  + GD+R  R  F++M+++GL   ++ YTVL++ +   G ++ A 
Sbjct: 606 DVPDLISYSKLISAYCQTGDMRNARLWFHDMVQRGLPVDVIVYTVLMNGYCKIGLMQEAC 665

Query: 614 MYFSEMQVKGIRPNVIT------------------------------------------- 630
             F++M   GI+P++I                                            
Sbjct: 666 ELFAQMTSLGIKPDIIAYTVLLDGHLKEDLQRRWQGISRDKRSLLLRAKQNRLLSSMKEM 725

Query: 631 --------YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
                   Y  LI+G C+   ++QA GLF +M ++G+ P+ Y YT LIN  C+ G   +A
Sbjct: 726 EIEPDVPCYTVLIDGQCKSDYLEQARGLFDEMLQKGLTPDHYAYTALINGYCSQGEVAKA 785

Query: 683 LRLYKEMLDREIEPDYCTHSAL 704
             L++EM+D+ I+PD  T S L
Sbjct: 786 EDLFQEMVDKGIKPDVLTFSVL 807



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 170/595 (28%), Positives = 299/595 (50%), Gaps = 42/595 (7%)

Query: 94  VRVLNRIREKPRIALRFFR-WVE-TQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVV 151
           +R++ R   + + A + F+ WVE  + GVK D     + +  L E G +  AY +++ ++
Sbjct: 228 LRIITRSLFQEKKADKAFKVWVEMIEMGVKPDVHGHSSFIIGLCECGKIDLAYAILQEII 287

Query: 152 --CVNMHGILDVLIGGGLSSCVSIKILDLLL-----------------LI--YTKKSMVE 190
              V +  I   ++  GL   + ++ ++ LL                 LI  Y K   + 
Sbjct: 288 REKVQVEAIAFNVVMDGLCKEMRLEEVEKLLENKVRQGLTPDIYGYSYLIRSYCKVGNLL 347

Query: 191 QCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTML 250
           + L  +  M+ +GL  +    + +++     G + +  E ++   + G+    V YN  +
Sbjct: 348 KVLDHYQAMVSHGLEANCHIMSYLLQCFTKLGMASQVTEYFQKFRDSGLHIDGVLYNIAM 407

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
           D++CK G M EA++LL EM   G SP+ + Y  LI G+   G+++ AR    +MLK  +K
Sbjct: 408 DAYCKLGNMDEAVKLLGEMMTVGLSPDRIHYTCLIKGYCLKGDIQNARQAFEEMLKANVK 467

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
               +YN +  G S++GL++E  +L   M  RG+ P   TY ++I G C+   +S+A   
Sbjct: 468 PDVVTYNILASGLSKRGLVMEVFDLIGHMEDRGLQPNSLTYGVVIDGFCRGDNLSEA-EV 526

Query: 371 FFEMLRKNVIPDI-ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
            F ++ +  I +I + Y++++ GY   G    A++LF  +  +  +    + + LI  LC
Sbjct: 527 LFNIVEEKGIDNIEVLYSSMVCGYLHKGWTDNAYVLFLRVAKQGKLVDRFSCSKLISDLC 586

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
           R G+ + A  +   M+ +  +PD+I+Y+ +++  C+ G++  AR +F++M+++GL  D  
Sbjct: 587 RDGNSQGASTVCSTMLEKNDVPDLISYSKLISAYCQTGDMRNARLWFHDMVQRGLPVDVI 646

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK-------------- 535
            YT  + G  K+G   EA  L  +M + G  PD+I Y VL+ G  K              
Sbjct: 647 VYTVLMNGYCKIGLMQEACELFAQMTSLGIKPDIIAYTVLLDGHLKEDLQRRWQGISRDK 706

Query: 536 --LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
             L    + N LL  M      PD   YT +I    +   L + R LF+ ML+KGL+P  
Sbjct: 707 RSLLLRAKQNRLLSSMKEMEIEPDVPCYTVLIDGQCKSDYLEQARGLFDEMLQKGLTPDH 766

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
             YT LI+ + ++G +  A   F EM  KGI+P+V+T++ L   + R R+ DQ+Y
Sbjct: 767 YAYTALINGYCSQGEVAKAEDLFQEMVDKGIKPDVLTFSVLNRRVLRNRQ-DQSY 820



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/387 (24%), Positives = 179/387 (46%)

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
           + + L  E+   GV P + T NIL+    +          + EM    +  D  S   + 
Sbjct: 173 DTIGLFGELCRLGVVPPVWTCNILLKFAAESCDSEIVLSAYDEMKFFRLTLDAHSLRIIT 232

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
               +     +AF ++ E+    + P V  +++ I GLC  G +++A  + + +I + + 
Sbjct: 233 RSLFQEKKADKAFKVWVEMIEMGVKPDVHGHSSFIIGLCECGKIDLAYAILQEIIREKVQ 292

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
            + I + ++++G CK   L    +     +R+GL PD + Y+  I    K+G+  +    
Sbjct: 293 VEAIAFNVVMDGLCKEMRLEEVEKLLENKVRQGLTPDIYGYSYLIRSYCKVGNLLKVLDH 352

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
            + M++ G   +    + L+    KLG   +  E  +K    G   D + Y   + A  +
Sbjct: 353 YQAMVSHGLEANCHIMSYLLQCFTKLGMASQVTEYFQKFRDSGLHIDGVLYNIAMDAYCK 412

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
           +G++     L   M+  GLSP  + YT LI  +  +G ++ A   F EM    ++P+V+T
Sbjct: 413 LGNMDEAVKLLGEMMTVGLSPDRIHYTCLIKGYCLKGDIQNARQAFEEMLKANVKPDVVT 472

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           YN L +GL +   + + + L   ME+ G+ PN  TY ++I+  C   N  EA  L+  + 
Sbjct: 473 YNILASGLSKRGLVMEVFDLIGHMEDRGLQPNSLTYGVVIDGFCRGDNLSEAEVLFNIVE 532

Query: 691 DREIEPDYCTHSALLLKQLDKDYKVHA 717
           ++ I+     +S+++   L K +  +A
Sbjct: 533 EKGIDNIEVLYSSMVCGYLHKGWTDNA 559


>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
 gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
 gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 167/570 (29%), Positives = 280/570 (49%), Gaps = 20/570 (3%)

Query: 109 RFFRWVETQPGVKRDEFVFCT------ILEILIESGLLRSAYWVVETVVCVNMHGILDVL 162
           R F  +E   G  R+E V  T      +L    ESG L  A  + + VV +    + DV+
Sbjct: 113 RIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVEL-YDSVPDVI 171

Query: 163 IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG 222
                 +C S      LL +  K   +     V+++M   G   D  +   ++K + + G
Sbjct: 172 ------ACNS------LLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEG 219

Query: 223 FSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYN 282
                R++       G  P+IV YNT++  +CK G+++ A  +  E++ +G  P   T+ 
Sbjct: 220 KVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFG 279

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
            +I GF + G+   +  L+ ++ + GL+VS    N II      G  V+       ++  
Sbjct: 280 TMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIAN 339

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
              P +ATYNILI  LCK G+   A     E  +K +IP+ +SY  L+  YC+S     A
Sbjct: 340 DCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIA 399

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
             L  ++  R   P +VTY  LI GL   G ++ A  +K  +I++G+ PD   Y ++++G
Sbjct: 400 SKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSG 459

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            CK G    A+  F+EML + + PD + Y T I G ++ GD  EA ++    + KG   D
Sbjct: 460 LCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVD 519

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
           ++ +N ++ G C+ G L+EA   + +M  +  +PD  TY++II   ++  D+     +F 
Sbjct: 520 VVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFR 579

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR-L 641
            M +    P +VTYT LI+    +G  ++A   F EMQ++ + PNV+TY  LI  L +  
Sbjct: 580 YMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKES 639

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
             +++A   +  M     +PN+ T+  L+ 
Sbjct: 640 STLEKAVYYWELMMTNKCVPNEVTFNCLLQ 669



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 142/528 (26%), Positives = 241/528 (45%), Gaps = 51/528 (9%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K   +E   LVF ++   G +P ++    +I      G  V +  +   + E G++ S
Sbjct: 250 YCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVS 309

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +   N ++D+  + G   +  E +  +    C P+  TYN+LI    + G+ E A G + 
Sbjct: 310 VWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLD 369

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +  K GL  +  SY P+I  Y +      A  L  +M  RG  P + TY ILI+GL   G
Sbjct: 370 EASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSG 429

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            + DA +   +++ + V PD   YN L+ G C++G    A LLF E+  RN++P    Y 
Sbjct: 430 HMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYA 489

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           TLIDG  R GD + A+++    + +G+  DV+ +  M+ G C+ G L  A    N M  +
Sbjct: 490 TLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEE 549

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
            L PD+F Y+T I G +K  D + A ++   M      P+++TY  L++G C  G  + A
Sbjct: 550 HLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMA 609

Query: 543 NELLRKMVGDGFIPDHITYTSIIHA-SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
            E  ++M     +P+ +TYT++I + + E   L +    +  M+     P  VT+  L+ 
Sbjct: 610 EETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQ 669

Query: 602 A--------------------------------------HAA-----------RGRLELA 612
                                                  HAA            G ++ A
Sbjct: 670 GFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTA 729

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL-FIDMEEEGI 659
            M+  +M  KG  P+ +++ A+++G C +    Q   + F ++ E+G+
Sbjct: 730 CMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGEKGL 777



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 184/406 (45%), Gaps = 15/406 (3%)

Query: 198 KMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG 257
           +M   G  PD+     +I  L  +G    A  +   + + G+ P    YN ++   CK G
Sbjct: 405 QMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTG 464

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
               A  L  EM  R   P+   Y  LI GF R+G+ ++AR +    ++ G+KV    +N
Sbjct: 465 RFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHN 524

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            +I G+   G+L EAL     M    + P   TY+ +I G  K   ++ A   F  M + 
Sbjct: 525 AMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKN 584

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD-LEV 436
              P++++Y +L+ G+C  G+   A   F E++ R+LVP VVTY TLI  L +    LE 
Sbjct: 585 KCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEK 644

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKM--------------GNLSMAREFFNEMLRK 482
           A    E M+    +P+ +T+  ++ G  K               G  S+  EFF+ M   
Sbjct: 645 AVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSD 704

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G      AY + +      G    A   Q++M+ KGF PD +++  ++HG C +G+ ++ 
Sbjct: 705 GWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQW 764

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
             +    +G+  +   + Y+ ++   L    +     + + M+ K 
Sbjct: 765 RNMDFCNLGEKGLEVAVRYSQVLEQHLPQPVICEASTILHAMVEKA 810


>gi|359495888|ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Vitis vinifera]
          Length = 580

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 137/441 (31%), Positives = 229/441 (51%), Gaps = 38/441 (8%)

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
            M+ + C EG+++ AL L  +M  +G  P+ +T+N L+ G  + G+LE+A  L+R+ML++
Sbjct: 136 AMIRNLCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEI 195

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           G   +  ++N  I GY     + +AL L   M   G+ P   TYNILI+ LCK G + DA
Sbjct: 196 GPSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDA 255

Query: 368 RH--------------------------------------RFFEMLRKNVIPDIISYNTL 389
           R                                        + EML++    D+++YN L
Sbjct: 256 RKLLEKILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVL 315

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
           ++G+C   ++  A+  F E+  R L+P + TYNTLI G C+ G+L+ A  +   M   G 
Sbjct: 316 IHGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSKMGA 375

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
            PD+I+Y +++ G C  G++  A +F   ML   + P+   +   I G  + GD S A  
Sbjct: 376 APDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDLSNALS 435

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           ++++M++ G PP++ TYN L+H   K G++ +A+ + ++M+ +G  PD +TY  +I A+ 
Sbjct: 436 IRDQMVSFGIPPNVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNLLIGAAC 495

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
             G +     L++ MLR+G  P ++TYT LI     RG +  A    +++Q  G+  +  
Sbjct: 496 NFGRIHFALRLYDEMLRRGYEPDIITYTELIRGFCIRGHVMEAEELLAKLQRSGLSIDHA 555

Query: 630 TYNALINGLCRLRRIDQAYGL 650
            +  LI   CR R   +AY L
Sbjct: 556 PFQILIQKYCRTRVPGRAYDL 576



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 147/402 (36%), Positives = 211/402 (52%), Gaps = 3/402 (0%)

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
           +G L  AL L  +M+ +GV P + T+N L+ GLCK G +  A +   EML     P+  +
Sbjct: 144 EGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIGPSPNCAT 203

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           +NT + GYC + N+ +A  LF  + +  + P  VTYN LI  LC+ G L+ A++L E ++
Sbjct: 204 FNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDARKLLEKIL 263

Query: 446 NQGI---LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
           +        D+IT TI ++G  K G++  A   ++EML++G Q D  AY   I G   + 
Sbjct: 264 DDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVLIHGFCLIQ 323

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
           D + AYR   EM  +G  PD+ TYN L+ G CK+G+L+EA  +   M   G  PD I+Y 
Sbjct: 324 DMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSKMGAAPDLISYK 383

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
            II      GD+ R       ML   + P  + + V+I  H   G L  A     +M   
Sbjct: 384 MIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDLSNALSIRDQMVSF 443

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
           GI PNV TYNALI+   +   I  A+ +  +M   GI P+  TY +LI   CN G    A
Sbjct: 444 GIPPNVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNLLIGAACNFGRIHFA 503

Query: 683 LRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           LRLY EML R  EPD  T++ L+     + + + A E L  L
Sbjct: 504 LRLYDEMLRRGYEPDIITYTELIRGFCIRGHVMEAEELLAKL 545


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 144/473 (30%), Positives = 241/473 (50%), Gaps = 9/473 (1%)

Query: 241 PSI---VTYNTMLDSFCKEGEMQEALELLWEMQ---GRGCSPNGVTYNVLITGFSRNGEL 294
           PS+   V+YNT+L + C+ G    A  LL  M       C PN V+Y VL+     +   
Sbjct: 72  PSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLA 131

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           +QA GL+R M   G++    +Y  +I G  +   + +A+ L  EM   G+ P +  Y+ L
Sbjct: 132 DQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSL 191

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           + G CK GR  D    F EM  K + PD++ Y  L+   C+ G   +A  + D +  R L
Sbjct: 192 LQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGL 251

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P VVTYN LI+ +C+ G ++ A  + + M  +G+ PDV+TY  ++ G   +  +  A  
Sbjct: 252 EPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMW 311

Query: 475 FFNEMLRKG--LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
              EM+R    ++P+   + + I G   +G   +A++++  M   G   +L+TYN+L+ G
Sbjct: 312 LLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGG 371

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           L ++  + +A EL+ +M   G  PD  TY+ +I    +M  + R  DL + M  +G+ P 
Sbjct: 372 LLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPE 431

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
           L  Y  L+ A   +G +E A   F+EM       +V+ Y+ +I+G C+   +  A  L  
Sbjct: 432 LFHYIPLLVAMCEQGMMERARNLFNEMD-NNFPLDVVAYSTMIHGACKAGDLKTAKELLK 490

Query: 653 DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            + +EG+ P+  TY+I+IN    +G+ + A  + K+M      PD     +L+
Sbjct: 491 SIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLI 543



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 133/439 (30%), Positives = 233/439 (53%), Gaps = 3/439 (0%)

Query: 188 MVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
           + +Q + +   M   G+  DV     +I+ L D     KA E+   M E GI+P++V Y+
Sbjct: 130 LADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYS 189

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
           ++L  +CK G  ++  ++  EM  +G  P+ V Y  LI    + G+ ++A G++  M++ 
Sbjct: 190 SLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRR 249

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           GL+ +  +YN +I    ++G + EA+ + ++M  +GVAP + TYN LI GL     + +A
Sbjct: 250 GLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEA 309

Query: 368 RHRFFEMLR-KNVI-PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
                EM+R KN++ P+++++N+++ G C  G + +AF +   +     +  +VTYN LI
Sbjct: 310 MWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLI 369

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
            GL R   +  A +L + M + G+ PD  TY+I++ G CKM  +  A +  + M  +G++
Sbjct: 370 GGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIE 429

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           P+ F Y   +    + G    A  L  EM    FP D++ Y+ ++HG CK G L+ A EL
Sbjct: 430 PELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKEL 488

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
           L+ +V +G  PD +TY+ +I+   + GD+     +   M   G  P +  +  LI  ++ 
Sbjct: 489 LKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYST 548

Query: 606 RGRLELAFMYFSEMQVKGI 624
           +G +        EM  K I
Sbjct: 549 KGEINKVLELIREMITKNI 567



 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 140/501 (27%), Positives = 244/501 (48%), Gaps = 9/501 (1%)

Query: 205 LPDVKNC---NRIIKVLRDNGFSVKAREVYRMMG---EFGIKPSIVTYNTMLDSFCKEGE 258
           LP V++    N ++  L   G   +A  + R M        +P+ V+Y  ++ + C +  
Sbjct: 71  LPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRL 130

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
             +A+ LL  M+  G   + VTY  LI G     E+++A  L+ +M + G++ +   Y+ 
Sbjct: 131 ADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSS 190

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           ++ GY + G   +   +  EM  +G+ P +  Y  LI  LCK G+   A      M+R+ 
Sbjct: 191 LLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRG 250

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
           + P++++YN L+   C+ G++ EA  +  ++  + + P VVTYNTLI GL    +++ A 
Sbjct: 251 LEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAM 310

Query: 439 QLKENMINQG--ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
            L E M+     + P+V+T+  ++ G C +G +  A +    M   G   +   Y   I 
Sbjct: 311 WLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIG 370

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
           G L++    +A  L +EM + G  PD  TY++L+ G CK+  ++ A +LL  M   G  P
Sbjct: 371 GLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEP 430

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
           +   Y  ++ A  E G + R R+LFN M        +V Y+ +IH     G L+ A    
Sbjct: 431 ELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELL 489

Query: 617 SEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNA 676
             +  +G+ P+ +TY+ +IN   +   ++ A G+   M   G LP+   +  LI      
Sbjct: 490 KSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTK 549

Query: 677 GNWQEALRLYKEMLDREIEPD 697
           G   + L L +EM+ + I  D
Sbjct: 550 GEINKVLELIREMITKNIALD 570



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 124/374 (33%), Positives = 198/374 (52%), Gaps = 3/374 (0%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL  Y K    E    VF +M   G+ PDV     +I  L   G + KA  V  MM   G
Sbjct: 191 LLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRG 250

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           ++P++VTYN +++  CKEG ++EA+ +L +M  +G +P+ VTYN LI G S   E+++A 
Sbjct: 251 LEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAM 310

Query: 299 GLIRDML--KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
            L+ +M+  K  +K +  ++N +I G  + G + +A  +   M   G    L TYN+LI 
Sbjct: 311 WLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIG 370

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           GL +  +V  A     EM    + PD  +Y+ L+ G+C+   +  A  L   +R R + P
Sbjct: 371 GLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEP 430

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
            +  Y  L+  +C  G +E A+ L   M N   L DV+ Y+ M++G+CK G+L  A+E  
Sbjct: 431 ELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPL-DVVAYSTMIHGACKAGDLKTAKELL 489

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
             ++ +GL PD   Y+  I    K GD   A  + ++M A GF PD+  ++ L+ G    
Sbjct: 490 KSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTK 549

Query: 537 GSLEEANELLRKMV 550
           G + +  EL+R+M+
Sbjct: 550 GEINKVLELIREMI 563



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 118/371 (31%), Positives = 190/371 (51%), Gaps = 13/371 (3%)

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVI-------PDIISYNTLLYGYCRSGNIGEA 402
           +YN ++  LC+ G       R   +LR   +       P+ +SY  L+   C      +A
Sbjct: 79  SYNTVLTALCRRGH----HDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQA 134

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
             L   +RS  +   VVTY TLI GLC   +++ A +L   M   GI P+V+ Y+ ++ G
Sbjct: 135 VGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQG 194

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            CK G      + F EM  KG++PD   YT  I    K+G   +A+ + + M+ +G  P+
Sbjct: 195 YCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPN 254

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
           ++TYNVL++ +CK GS++EA  +L+KM   G  PD +TY ++I    ++ ++     L  
Sbjct: 255 VVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLE 314

Query: 583 NMLRKG--LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
            M+R    + P +VT+  +I      GR+  AF   + M+  G   N++TYN LI GL R
Sbjct: 315 EMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLR 374

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
           + ++ +A  L  +M   G+ P+ +TY+ILI   C       A  L   M DR IEP+   
Sbjct: 375 VHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFH 434

Query: 701 HSALLLKQLDK 711
           +  LL+   ++
Sbjct: 435 YIPLLVAMCEQ 445



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/370 (22%), Positives = 155/370 (41%), Gaps = 85/370 (22%)

Query: 116 TQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKI 175
           ++ G++ D  ++  +++ L + G  + A            HG++D+++  GL    ++  
Sbjct: 212 SEKGIEPDVVMYTGLIDSLCKVGKAKKA------------HGVMDMMVRRGLEP--NVVT 257

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDN-------------- 221
            ++L+    K+  V++ + V  KM   G+ PDV   N +IK L D               
Sbjct: 258 YNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMV 317

Query: 222 -----------------------GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
                                  G   +A +V  MM E G   ++VTYN ++    +  +
Sbjct: 318 RGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHK 377

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           +++A+EL+ EM   G  P+  TY++LI GF +  ++++A  L+  M   G++     Y P
Sbjct: 378 VRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIP 437

Query: 319 IICGYSEKGLLVEALNLEEEM----------------------------------VTRGV 344
           ++    E+G++  A NL  EM                                  V  G+
Sbjct: 438 LLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGL 497

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
            P   TY+I+I    K G +  A     +M     +PD+  +++L+ GY   G I +   
Sbjct: 498 TPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLE 557

Query: 405 LFDELRSRNL 414
           L  E+ ++N+
Sbjct: 558 LIREMITKNI 567



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 135/288 (46%), Gaps = 22/288 (7%)

Query: 120 VKRDEFVFCTILEILIESGLLRSAYWV---VETVVCVNMHGILDVLIGGGLSSCVSIKIL 176
           VK +   F ++++ L + G +R A+ V   +E   C+      ++LIGG           
Sbjct: 323 VKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGG----------- 371

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
             LL ++  +  +E    + ++M   GL PD    + +IK         +A ++   M +
Sbjct: 372 --LLRVHKVRKAME----LMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRD 425

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            GI+P +  Y  +L + C++G M+ A  L  EM       + V Y+ +I G  + G+L+ 
Sbjct: 426 RGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNN-FPLDVVAYSTMIHGACKAGDLKT 484

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A+ L++ ++  GL   A +Y+ +I  +++ G +  A  + ++M   G  P +A ++ LI 
Sbjct: 485 AKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQ 544

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
           G    G ++       EM+ KN+  D    +TL      S N G+A L
Sbjct: 545 GYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVAS-NEGKALL 591


>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 538

 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 135/418 (32%), Positives = 223/418 (53%), Gaps = 5/418 (1%)

Query: 257 GEMQEALELLWEMQGR--GC-SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           G +  A ELL +      GC +P  ++ +V++ GF + G ++ AR L+ +M + G+K++A
Sbjct: 111 GHLLPAAELLRKALASCPGCITP--LSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNA 168

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
             YNP++  Y+ +        + +EM + GV PT+ TY IL+ GL   G +S     F E
Sbjct: 169 CCYNPLLDTYTRQKNDARVAEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDE 228

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           + RKNV  D+  Y+ ++  YCR+GN+  A  +FDE     + P   TY  LI+G C+ G 
Sbjct: 229 IKRKNVAGDVYFYSAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQ 288

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           +E A+ L  +M  +G+  + I +  M++G C+ G +  A E    M R G+Q D + Y T
Sbjct: 289 IEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNT 348

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
              G  ++    +A +L   M   G   + ++Y  L+    K G + EA  L R M G G
Sbjct: 349 LACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKG 408

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
             P  +TY  +I   ++ G +R        M +KGL P + TY  L+H H   G++++A 
Sbjct: 409 SRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVAL 468

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
             F EM+ +G +PNV+ Y ALI+GL +  R ++A+  + +M   G+ P+   Y++L+ 
Sbjct: 469 RLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLVG 526



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 119/391 (30%), Positives = 203/391 (51%)

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           S + ++ G+ + G + +A  L +EM   GV      YN L+    +    +       EM
Sbjct: 135 SASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEM 194

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
               V P + +Y  L+ G   +G+I +   +FDE++ +N+   V  Y+ +I+  CR G++
Sbjct: 195 ESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNV 254

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
             A ++ +  +  GI P+  TY  ++NG CK+G +  A     +M  +G+  ++  + T 
Sbjct: 255 RRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTM 314

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I G  + G   +A  ++  M   G   D+ TYN L  GLC++  +E+A +LL  M  +G 
Sbjct: 315 IDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGV 374

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
             ++++YT++I    + GD+   R LF +M  KG  P++VTY V+I  +   G +  A  
Sbjct: 375 ESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAER 434

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
           +  EM+ KG+ P+V TY AL++G C   ++D A  LF +M++ G  PN   YT LI+   
Sbjct: 435 FKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLA 494

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             G  +EA + Y  ML   + PD   +S L+
Sbjct: 495 KEGRSEEAFQFYDNMLAAGLTPDDTLYSMLV 525



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 114/355 (32%), Positives = 188/355 (52%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL  YT++    +   V  +M   G+ P V     ++  L   G   K   V+  +    
Sbjct: 174 LLDTYTRQKNDARVAEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKN 233

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           +   +  Y+ +++++C+ G ++ A E+  E  G G  PN  TY  LI GF + G++E A 
Sbjct: 234 VAGDVYFYSAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAE 293

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L+ DM   G+  +   +N +I GY   G++ +AL ++  M   G+   + TYN L  GL
Sbjct: 294 MLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGL 353

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C+  R+ DA+     M    V  + +SY TL+  + + G++ EA  LF ++  +   P+V
Sbjct: 354 CRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSV 413

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           VTYN +IDG  + G +  A++ K+ M  +G++PDV TY  +V+G C  G + +A   F E
Sbjct: 414 VTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEE 473

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
           M ++G +P+  AYT  I+G  K G + EA++  + MLA G  PD   Y++LV  L
Sbjct: 474 MKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLVGSL 528



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 104/396 (26%), Positives = 190/396 (47%)

Query: 170 CVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE 229
           C++     +++  + K   ++    + ++M R+G+  +    N ++          +  E
Sbjct: 130 CITPLSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAE 189

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           V + M   G++P++ TY  ++D     G++ +   +  E++ +  + +   Y+ +I  + 
Sbjct: 190 VLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYC 249

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           R G + +A  +  + +  G++ +  +Y  +I G+ + G +  A  L  +M  RGV     
Sbjct: 250 RAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQI 309

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
            +N +I G C+ G V  A      M R  +  D+ +YNTL  G CR   + +A  L   +
Sbjct: 310 IFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIM 369

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
               +    V+Y TLI    + GD+  A++L  +M  +G  P V+TY +M++G  K G++
Sbjct: 370 TENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSI 429

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A  F  EM +KGL PD + Y   + G    G    A RL EEM  +G  P+++ Y  L
Sbjct: 430 REAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTAL 489

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           + GL K G  EEA +    M+  G  PD   Y+ ++
Sbjct: 490 ISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLV 525


>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 126/368 (34%), Positives = 208/368 (56%), Gaps = 3/368 (0%)

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
           E++  G  P +  +NIL++G CK G V +AR  F E+ R+ + P ++S+NTL+ GYCRS 
Sbjct: 216 EVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSK 275

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
           N+ E F+L   + S  + P V TY+ LI+GLC+   +E A  L + M   G++P+ +T+T
Sbjct: 276 NVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFT 335

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
            +++G CK G + +A   F  M  +G++PD   Y   I G  + GD  EA +L  EM+  
Sbjct: 336 TLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGN 395

Query: 518 GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
           GF PD IT+  L+ G CK G ++ A E+  +MV +G   D + +T++I      G +R  
Sbjct: 396 GFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDA 455

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
             +  +ML  G  P   TYT++I     +G +++      EMQ  G  P V+TYNAL+NG
Sbjct: 456 ERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNG 515

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
            C+  ++  A  L   M    ++PN  T+ IL++ +C  G+  +  +++    ++ +  D
Sbjct: 516 FCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGSSVD-FKIFNG--EKGLVSD 572

Query: 698 YCTHSALL 705
           Y +++AL+
Sbjct: 573 YASYTALV 580



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 134/465 (28%), Positives = 237/465 (50%), Gaps = 37/465 (7%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           S+ + D L++ YT    +E  +     + +N     V  C+ ++            R V 
Sbjct: 154 SVLVFDALIIAYTDSEFIEDAIQCLRLVKKNNFSIPVCGCDYLL------------RRVM 201

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
           ++  + G                         E   E+   G  PN   +N+L+ GF + 
Sbjct: 202 KLNQQPG----------------------HCWEFYLEVLDYGYPPNVYLFNILMHGFCKI 239

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G++  AR +  ++ + GL+ S  S+N +I GY     + E   L+  M +  ++P + TY
Sbjct: 240 GDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTY 299

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           + LI GLCK  RV +A   F EM    ++P+ +++ TL+ G C+ G I  A   F+ ++ 
Sbjct: 300 SALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKD 359

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           R + P ++TYN LI+GLCR GDL+ A++L   MI  G  PD IT+T +++G CK G++  
Sbjct: 360 RGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDS 419

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A E  + M+ +G++ D  A+T  I+G  + G   +A R+ ++ML+ G  PD  TY +++ 
Sbjct: 420 ALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVID 479

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
             CK G ++   +LL++M  DG +P  +TY ++++   + G ++  + L + ML   + P
Sbjct: 480 CFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVP 539

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
             +T+ +L+  H   G   + F  F+    KG+  +  +Y AL+N
Sbjct: 540 NDITFNILLDGHCKHGS-SVDFKIFN--GEKGLVSDYASYTALVN 581



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 81/282 (28%), Positives = 156/282 (55%), Gaps = 3/282 (1%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K+S VE+   +F++M   GL+P+      +I     +G    A   + +M + GI+P ++
Sbjct: 308 KESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLI 367

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TYN +++  C++G+++EA +LL EM G G  P+ +T+  L+ G  ++G+++ A  +   M
Sbjct: 368 TYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRM 427

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           ++ G+++   ++  +I G    G + +A  + ++M++ G  P   TY ++I   CK G V
Sbjct: 428 VEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDV 487

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
                   EM R   +P +++YN L+ G+C+ G +  A +L   + +  +VP  +T+N L
Sbjct: 488 KMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNIL 547

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
           +DG C++G    +   K     +G++ D  +YT +VN S K+
Sbjct: 548 LDGHCKHGS---SVDFKIFNGEKGLVSDYASYTALVNESIKI 586


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 144/473 (30%), Positives = 241/473 (50%), Gaps = 9/473 (1%)

Query: 241 PSI---VTYNTMLDSFCKEGEMQEALELLWEMQ---GRGCSPNGVTYNVLITGFSRNGEL 294
           PS+   V+YNT+L + C+ G    A  LL  M       C PN V+Y VL+     +   
Sbjct: 72  PSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLA 131

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           +QA GL+R M   G++    +Y  +I G  +   + +A+ L  EM   G+ P +  Y+ L
Sbjct: 132 DQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSL 191

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           + G CK GR  D    F EM  K + PD++ Y  L+   C+ G   +A  + D +  R L
Sbjct: 192 LQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGL 251

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P VVTYN LI+ +C+ G ++ A  + + M  +G+ PDV+TY  ++ G   +  +  A  
Sbjct: 252 EPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMW 311

Query: 475 FFNEMLRKG--LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
              EM+R    ++P+   + + I G   +G   +A++++  M   G   +L+TYN+L+ G
Sbjct: 312 LLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGG 371

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           L ++  + +A EL+ +M   G  PD  TY+ +I    +M  + R  DL + M  +G+ P 
Sbjct: 372 LLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPE 431

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
           L  Y  L+ A   +G +E A   F+EM       +V+ Y+ +I+G C+   +  A  L  
Sbjct: 432 LFHYIPLLVAMCEQGMMERARNLFNEMD-NNFPLDVVAYSTMIHGACKAGDLKTAKELLK 490

Query: 653 DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            + +EG+ P+  TY+I+IN    +G+ + A  + K+M      PD     +L+
Sbjct: 491 SIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLI 543



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 133/439 (30%), Positives = 233/439 (53%), Gaps = 3/439 (0%)

Query: 188 MVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
           + +Q + +   M   G+  DV     +I+ L D     KA E+   M E GI+P++V Y+
Sbjct: 130 LADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYS 189

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
           ++L  +CK G  ++  ++  EM  +G  P+ V Y  LI    + G+ ++A G++  M++ 
Sbjct: 190 SLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRR 249

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           GL+ +  +YN +I    ++G + EA+ + ++M  +GVAP + TYN LI GL     + +A
Sbjct: 250 GLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEA 309

Query: 368 RHRFFEMLR-KNVI-PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
                EM+R KN++ P+++++N+++ G C  G + +AF +   +     +  +VTYN LI
Sbjct: 310 MWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLI 369

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
            GL R   +  A +L + M + G+ PD  TY+I++ G CKM  +  A +  + M  +G++
Sbjct: 370 GGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIE 429

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           P+ F Y   +    + G    A  L  EM    FP D++ Y+ ++HG CK G L+ A EL
Sbjct: 430 PELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKEL 488

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
           L+ +V +G  PD +TY+ +I+   + GD+     +   M   G  P +  +  LI  ++ 
Sbjct: 489 LKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYST 548

Query: 606 RGRLELAFMYFSEMQVKGI 624
           +G +        EM  K I
Sbjct: 549 KGEINKVLELIREMITKNI 567



 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 140/501 (27%), Positives = 244/501 (48%), Gaps = 9/501 (1%)

Query: 205 LPDVKNC---NRIIKVLRDNGFSVKAREVYRMMG---EFGIKPSIVTYNTMLDSFCKEGE 258
           LP V++    N ++  L   G   +A  + R M        +P+ V+Y  ++ + C +  
Sbjct: 71  LPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRL 130

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
             +A+ LL  M+  G   + VTY  LI G     E+++A  L+ +M + G++ +   Y+ 
Sbjct: 131 ADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSS 190

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           ++ GY + G   +   +  EM  +G+ P +  Y  LI  LCK G+   A      M+R+ 
Sbjct: 191 LLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRG 250

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
           + P++++YN L+   C+ G++ EA  +  ++  + + P VVTYNTLI GL    +++ A 
Sbjct: 251 LEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAM 310

Query: 439 QLKENMINQG--ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
            L E M+     + P+V+T+  ++ G C +G +  A +    M   G   +   Y   I 
Sbjct: 311 WLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIG 370

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
           G L++    +A  L +EM + G  PD  TY++L+ G CK+  ++ A +LL  M   G  P
Sbjct: 371 GLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEP 430

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
           +   Y  ++ A  E G + R R+LFN M        +V Y+ +IH     G L+ A    
Sbjct: 431 ELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELL 489

Query: 617 SEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNA 676
             +  +G+ P+ +TY+ +IN   +   ++ A G+   M   G LP+   +  LI      
Sbjct: 490 KSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTK 549

Query: 677 GNWQEALRLYKEMLDREIEPD 697
           G   + L L +EM+ + I  D
Sbjct: 550 GEINKVLELIREMITKNIALD 570



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 124/374 (33%), Positives = 198/374 (52%), Gaps = 3/374 (0%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL  Y K    E    VF +M   G+ PDV     +I  L   G + KA  V  MM   G
Sbjct: 191 LLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRG 250

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           ++P++VTYN +++  CKEG ++EA+ +L +M  +G +P+ VTYN LI G S   E+++A 
Sbjct: 251 LEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAM 310

Query: 299 GLIRDML--KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
            L+ +M+  K  +K +  ++N +I G  + G + +A  +   M   G    L TYN+LI 
Sbjct: 311 WLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIG 370

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           GL +  +V  A     EM    + PD  +Y+ L+ G+C+   +  A  L   +R R + P
Sbjct: 371 GLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEP 430

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
            +  Y  L+  +C  G +E A+ L   M N   L DV+ Y+ M++G+CK G+L  A+E  
Sbjct: 431 ELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPL-DVVAYSTMIHGACKAGDLKTAKELL 489

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
             ++ +GL PD   Y+  I    K GD   A  + ++M A GF PD+  ++ L+ G    
Sbjct: 490 KSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTK 549

Query: 537 GSLEEANELLRKMV 550
           G + +  EL+R+M+
Sbjct: 550 GEINKVLELIREMI 563



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 118/371 (31%), Positives = 190/371 (51%), Gaps = 13/371 (3%)

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVI-------PDIISYNTLLYGYCRSGNIGEA 402
           +YN ++  LC+ G       R   +LR   +       P+ +SY  L+   C      +A
Sbjct: 79  SYNTVLTALCRRGH----HDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQA 134

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
             L   +RS  +   VVTY TLI GLC   +++ A +L   M   GI P+V+ Y+ ++ G
Sbjct: 135 VGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQG 194

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            CK G      + F EM  KG++PD   YT  I    K+G   +A+ + + M+ +G  P+
Sbjct: 195 YCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPN 254

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
           ++TYNVL++ +CK GS++EA  +L+KM   G  PD +TY ++I    ++ ++     L  
Sbjct: 255 VVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLE 314

Query: 583 NMLRKG--LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
            M+R    + P +VT+  +I      GR+  AF   + M+  G   N++TYN LI GL R
Sbjct: 315 EMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLR 374

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
           + ++ +A  L  +M   G+ P+ +TY+ILI   C       A  L   M DR IEP+   
Sbjct: 375 VHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFH 434

Query: 701 HSALLLKQLDK 711
           +  LL+   ++
Sbjct: 435 YIPLLVAMCEQ 445



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 83/371 (22%), Positives = 155/371 (41%), Gaps = 85/371 (22%)

Query: 116 TQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKI 175
           ++ G++ D  ++  +++ L + G  + A            HG++D+++  GL    ++  
Sbjct: 212 SEKGIEPDVVMYTGLIDSLCKVGKAKKA------------HGVMDMMVRRGLEP--NVVT 257

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDN-------------- 221
            ++L+    K+  V++ + V  KM   G+ PDV   N +IK L D               
Sbjct: 258 YNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMV 317

Query: 222 -----------------------GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
                                  G   +A +V  MM E G   ++VTYN ++    +  +
Sbjct: 318 RGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHK 377

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           +++A+EL+ EM   G  P+  TY++LI GF +  ++++A  L+  M   G++     Y P
Sbjct: 378 VRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIP 437

Query: 319 IICGYSEKGLLVEALNLEEEM----------------------------------VTRGV 344
           ++    E+G++  A NL  EM                                  V  G+
Sbjct: 438 LLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGL 497

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
            P   TY+I+I    K G +  A     +M     +PD+  +++L+ GY   G I +   
Sbjct: 498 TPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLE 557

Query: 405 LFDELRSRNLV 415
           L  E+ ++N+ 
Sbjct: 558 LIREMITKNIA 568



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 135/288 (46%), Gaps = 22/288 (7%)

Query: 120 VKRDEFVFCTILEILIESGLLRSAYWV---VETVVCVNMHGILDVLIGGGLSSCVSIKIL 176
           VK +   F ++++ L + G +R A+ V   +E   C+      ++LIGG           
Sbjct: 323 VKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGG----------- 371

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
             LL ++     V + + + ++M   GL PD    + +IK         +A ++   M +
Sbjct: 372 --LLRVHK----VRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRD 425

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            GI+P +  Y  +L + C++G M+ A  L  EM       + V Y+ +I G  + G+L+ 
Sbjct: 426 RGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNN-FPLDVVAYSTMIHGACKAGDLKT 484

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A+ L++ ++  GL   A +Y+ +I  +++ G +  A  + ++M   G  P +A ++ LI 
Sbjct: 485 AKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQ 544

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
           G    G ++       EM+ KN+  D    +TL      S N G+A L
Sbjct: 545 GYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVAS-NEGKALL 591


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 144/495 (29%), Positives = 250/495 (50%), Gaps = 5/495 (1%)

Query: 202 NGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQE 261
            G  PDV +   +I      G S KA   Y  M +  I P +VTY++++ + CK   M +
Sbjct: 190 GGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDK 249

Query: 262 ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG-----LKVSAHSY 316
           A+E+L  M   G  PN  TY  ++ G+  +G+ ++A G ++ +   G     L+    +Y
Sbjct: 250 AMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATY 309

Query: 317 NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
             ++ GY+ KG LV    L + MV  G+ P    YNILI    K G+V +A   F +M +
Sbjct: 310 CTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQ 369

Query: 377 KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
           + + PD ++Y  ++   C+SG + +A L F+++    L P  + YN+LI GLC     E 
Sbjct: 370 QGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWER 429

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
           A++L   M+++GI  + I +  +++  CK G +  + + F+ M+R G++PD   Y+T I 
Sbjct: 430 AEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLID 489

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
           G    G   EA +L   M++ G  P+ +TY  L++G CK+  + +A  L ++M   G  P
Sbjct: 490 GYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSP 549

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
           D ITY  I+    +       ++L+  +   G    L TY +++H        + A   F
Sbjct: 550 DIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMF 609

Query: 617 SEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNA 676
             + +  ++    T+N +I+ L ++ R  +A  LF+     G++PN +TY ++       
Sbjct: 610 QNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQ 669

Query: 677 GNWQEALRLYKEMLD 691
           G  +E  +L+  M D
Sbjct: 670 GLLEELDQLFLSMED 684



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 140/469 (29%), Positives = 225/469 (47%), Gaps = 10/469 (2%)

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL---LWEMQGRGCSPNGVTYNVLIT 286
           V R M E    P + +   +L   C E   QEALEL   + + +G G +P+ V+Y  +I 
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVIN 204

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           GF + G+  +A     +ML   +     +Y+ II    +   + +A+ +   MV  GV P
Sbjct: 205 GFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMP 264

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI------PDIISYNTLLYGYCRSGNIG 400
              TY  +++G C  G+  +A   F + +R + +      PDI +Y TLL GY   G + 
Sbjct: 265 NCRTYTSIMHGYCSSGQPKEAIG-FLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALV 323

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
               L D +    + P    YN LI    + G ++ A  +   M  QG+ PD +TY  ++
Sbjct: 324 GMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVI 383

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
              CK G +  A  +F +M+ +GL P    Y + I G         A  L  EML +G  
Sbjct: 384 GILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGIC 443

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
            + I +N ++   CK G + E+ +L   MV  G  PD ITY+++I      G +     L
Sbjct: 444 LNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKL 503

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
            + M+  GL P  VTY  LI+ +    R+  A + F EM+  G+ P++ITYN ++ GL +
Sbjct: 504 LSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQ 563

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
            RR   A  L++ + E G      TY I+++  C      +ALR+++ +
Sbjct: 564 TRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNL 612



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 150/557 (26%), Positives = 252/557 (45%), Gaps = 46/557 (8%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM--GEFGIKPSIVTY------ 246
           VF+++LR G    +   NR +  +  +  +       RM   G   + P++ TY      
Sbjct: 37  VFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIGC 96

Query: 247 -----------------------------NTMLDSFCKEGEMQEALEL-LWEMQGRGCSP 276
                                          +L   C +    +A+++ L  M    C P
Sbjct: 97  CCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMP 156

Query: 277 NGVTYNVLITGF---SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
           +  +  +L+ G    +R+ E  +   ++ D    G      SY  +I G+ ++G   +A 
Sbjct: 157 DVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKAY 216

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
           +   EM+ R ++P + TY+ +I  LCK   +  A      M++  V+P+  +Y ++++GY
Sbjct: 217 STYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGY 276

Query: 394 CRSGNIGEAFLLFDELRS-----RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
           C SG   EA     ++RS       L P + TY TL+ G    G L     L + M+  G
Sbjct: 277 CSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNG 336

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
           I PD   Y I++    K G +  A   F++M ++GL PD   Y   I    K G   +A 
Sbjct: 337 IHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAM 396

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
              E+M+ +G  P  I YN L+HGLC     E A EL+ +M+  G   + I + SII + 
Sbjct: 397 LYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSH 456

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
            + G +     LF+ M+R G+ P ++TY+ LI  +   G+++ A    S M   G++PN 
Sbjct: 457 CKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNT 516

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
           +TY  LING C++ R+  A  LF +ME  G+ P+  TY I++           A  LY  
Sbjct: 517 VTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVR 576

Query: 689 MLDREIEPDYCTHSALL 705
           + +   + +  T++ +L
Sbjct: 577 ITESGTQIELSTYNIIL 593



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 147/507 (28%), Positives = 247/507 (48%), Gaps = 12/507 (2%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
            +++ML   + PDV   + II  L       KA EV   M + G+ P+  TY +++  +C
Sbjct: 218 TYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYC 277

Query: 255 KEGEMQEALELLWEMQGRGCSPNGV-----TYNVLITGFSRNGELEQARGLIRDMLKLGL 309
             G+ +EA+  L +++  G  P+G+     TY  L+ G++  G L     L+  M++ G+
Sbjct: 278 SSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGI 337

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
               + YN +IC Y+++G + EA+ +  +M  +G+ P   TY  +I  LCK GRV DA  
Sbjct: 338 HPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAML 397

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
            F +M+ + + P  I YN+L++G C       A  L  E+  R +    + +N++ID  C
Sbjct: 398 YFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHC 457

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
           + G +  +++L + M+  G+ PD+ITY+ +++G C  G +  A +  + M+  GL+P+  
Sbjct: 458 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTV 517

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
            Y T I G  K+    +A  L +EM + G  PD+ITYN+++ GL +      A EL  ++
Sbjct: 518 TYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRI 577

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRL 609
              G   +  TY  I+H   +         +F N+    L     T+ ++I A    GR 
Sbjct: 578 TESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRN 637

Query: 610 ELAFMYFSEMQVKGIRPNVITYNAL---INGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
             A   F      G+ PN  TY  +   I G   L  +DQ   LF+ ME+ G   +    
Sbjct: 638 GEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQ---LFLSMEDNGCTVDSGML 694

Query: 667 TILINENCNAGNWQEALRLYKEMLDRE 693
             ++ E    G    A   Y  M+D +
Sbjct: 695 NFIVRELLQRGEITRA-GTYLSMIDEK 720



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 139/523 (26%), Positives = 247/523 (47%), Gaps = 12/523 (2%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF------- 237
           K   +++ + V   M++NG++P   NC     ++     S + +E    + +        
Sbjct: 243 KGQAMDKAMEVLTSMVKNGVMP---NCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEP 299

Query: 238 -GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G++P I TY T+L  +  +G +     LL  M   G  P+   YN+LI  +++ G++++
Sbjct: 300 DGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDE 359

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  +   M + GL   A +Y  +I    + G + +A+   E+M+  G++P    YN LI+
Sbjct: 360 AMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIH 419

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           GLC   +   A     EML + +  + I +N+++  +C+ G + E+  LFD +    + P
Sbjct: 420 GLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 479

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
            ++TY+TLIDG C  G ++ A +L   M++ G+ P+ +TY  ++NG CK+  +  A   F
Sbjct: 480 DIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLF 539

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
            EM   G+ PD   Y   + G  +   T+ A  L   +   G   +L TYN+++HGLCK 
Sbjct: 540 KEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKN 599

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
              ++A  + + +       +  T+  +I A L++G     +DLF      GL P   TY
Sbjct: 600 KLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTY 659

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
            ++      +G LE     F  M+  G   +    N ++  L +   I +A G ++ M +
Sbjct: 660 RLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA-GTYLSMID 718

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
           E     + +   L  +  + G +QE  R   E     IE   C
Sbjct: 719 EKHFSLEASTASLFIDLLSGGKYQEYHRFLPEKYKSFIESLSC 761



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/412 (29%), Positives = 198/412 (48%), Gaps = 13/412 (3%)

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG---VAPTLATY 351
           E AR +  ++L+ G   S +  N  +   +       A++    M   G   V PT+ TY
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARHSP-AAAVSRYNRMARAGAGKVTPTVHTY 90

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF-LLFDELR 410
            ILI   C+  R+         +++K    + I++  LL G C      +A  ++   + 
Sbjct: 91  AILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMIN---QGILPDVITYTIMVNGSCKMG 467
             + +P V +   L+ GLC     + A +L   M +    G  PDV++YT ++NG  K G
Sbjct: 151 ELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEG 210

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
           +   A   ++EML + + PD   Y++ IA   K     +A  +   M+  G  P+  TY 
Sbjct: 211 DSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYT 270

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHI-----TYTSIIHASLEMGDLRRGRDLFN 582
            ++HG C  G  +EA   L+K+  DG  PD +     TY +++      G L     L +
Sbjct: 271 SIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLD 330

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
            M+R G+ P    Y +LI A+A +G+++ A + FS+M+ +G+ P+ +TY A+I  LC+  
Sbjct: 331 LMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSG 390

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           R++ A   F  M +EG+ P    Y  LI+  C    W+ A  L  EMLDR I
Sbjct: 391 RVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGI 442



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/422 (28%), Positives = 202/422 (47%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL  Y  K  +     + + M+RNG+ PD    N +I      G   +A  V+  M + G
Sbjct: 312 LLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQG 371

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           + P  VTY  ++   CK G +++A+    +M   G SP  + YN LI G     + E+A 
Sbjct: 372 LNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAE 431

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            LI +ML  G+ ++   +N II  + ++G ++E+  L + MV  GV P + TY+ LI G 
Sbjct: 432 ELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY 491

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C  G++ +A      M+   + P+ ++Y TL+ GYC+   +G+A +LF E+ S  + P +
Sbjct: 492 CLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDI 551

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           +TYN ++ GL +      A++L   +   G   ++ TY I+++G CK      A   F  
Sbjct: 552 ITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQN 611

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           +    L+ +   +   I   LK+G   EA  L     + G  P+  TY ++   +   G 
Sbjct: 612 LCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGL 671

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           LEE ++L   M  +G   D      I+   L+ G++ R     + +  K  S    T ++
Sbjct: 672 LEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASL 731

Query: 599 LI 600
            I
Sbjct: 732 FI 733



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 123/448 (27%), Positives = 211/448 (47%), Gaps = 18/448 (4%)

Query: 103 KPRIALRFFRWVET---QP-GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGI 158
           +P+ A+ F + V +   +P G++ D   +CT+L+     G L            V MH +
Sbjct: 281 QPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGAL------------VGMHAL 328

Query: 159 LDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL 218
           LD+++  G+       + ++L+  Y K+  V++ +LVF+KM + GL PD      +I +L
Sbjct: 329 LDLMVRNGIHP--DHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGIL 386

Query: 219 RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNG 278
             +G    A   +  M + G+ P  + YN+++   C   + + A EL+ EM  RG   N 
Sbjct: 387 CKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNT 446

Query: 279 VTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
           + +N +I    + G + ++  L   M+++G+K    +Y+ +I GY   G + EA+ L   
Sbjct: 447 IFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSG 506

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
           MV+ G+ P   TY  LI G CK  R+ DA   F EM    V PDII+YN +L G  ++  
Sbjct: 507 MVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRR 566

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
              A  L+  +        + TYN ++ GLC+    + A ++ +N+    +  +  T+ I
Sbjct: 567 TAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNI 626

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           M++   K+G    A++ F      GL P+ + Y       +  G   E  +L   M   G
Sbjct: 627 MIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 686

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELL 546
              D    N +V  L + G +  A   L
Sbjct: 687 CTVDSGMLNFIVRELLQRGEITRAGTYL 714



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/352 (23%), Positives = 145/352 (41%), Gaps = 48/352 (13%)

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG---ILPDVITYT 457
           +A  +FDEL  R    ++   N  +  + R+       +    M   G   + P V TY 
Sbjct: 33  DARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNR-MARAGAGKVTPTVHTYA 91

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ-EEMLA 516
           I++   C+   L +       +++KG + +   +T  + G      TS+A  +    M  
Sbjct: 92  ILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 517 KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV---GDGFIPDHITYTSIIHASLEMGD 573
               PD+ +  +L+ GLC     +EA EL   M    G G  PD ++YT++I+   + GD
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGD 211

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
             +    ++ ML + +SP +VTY+ +I A      ++ A    + M   G+ PN  TY +
Sbjct: 212 SGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTS 271

Query: 634 LINGLCRLRRIDQAYGL---------------------------------------FID- 653
           +++G C   +  +A G                                         +D 
Sbjct: 272 IMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDL 331

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           M   GI P+ Y Y ILI      G   EA+ ++ +M  + + PD  T+ A++
Sbjct: 332 MVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVI 383



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/249 (20%), Positives = 100/249 (40%), Gaps = 10/249 (4%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE-----VYRMMGEF 237
           Y     +++ + + + M+  GL P+      +I     NG+   +R      +++ M   
Sbjct: 491 YCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLI-----NGYCKISRMGDALVLFKEMESS 545

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G+ P I+TYN +L    +      A EL   +   G      TYN+++ G  +N   + A
Sbjct: 546 GVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDA 605

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             + +++  + LK+ A ++N +I    + G   EA +L     + G+ P   TY ++   
Sbjct: 606 LRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAEN 665

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           +   G + +    F  M       D    N ++    + G I  A      +  ++    
Sbjct: 666 IIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLE 725

Query: 418 VVTYNTLID 426
             T +  ID
Sbjct: 726 ASTASLFID 734


>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 167/601 (27%), Positives = 295/601 (49%), Gaps = 40/601 (6%)

Query: 142  SAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLR 201
            S Y + ET        I + L   GLS        ++L+  Y+K   +++   + ++M+ 
Sbjct: 486  SLYTLAETGRISEAEDIFNDLHKCGLSP--DSVTYNMLMKCYSKAGQIDKATQLLSEMIS 543

Query: 202  NGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQE 261
             G  PDV   N +I  L   G    A +++  +    + P++VTYN +L    KEG++ +
Sbjct: 544  KGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILK 603

Query: 262  ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC 321
            ALEL   M   GC PN +T+N L+   S+N  ++ A  +   M  +       +YN II 
Sbjct: 604  ALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIY 663

Query: 322  GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE-------- 373
            G   +G +  A     +M  + ++P   T   LI G+ + GRV DA     E        
Sbjct: 664  GLIREGRIDYAFWFFHQM-KKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQ 722

Query: 374  ------------MLRKNVIPDIISYNTLLYG----------------YCRSGNIGEAFLL 405
                        +L +  I + IS+  +L                   C+     +A  +
Sbjct: 723  TNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNV 782

Query: 406  FDEL-RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
            FD+  ++  + PT+ +YN L+DGL      E A +L E+M + G  P+  TY ++++   
Sbjct: 783  FDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHG 842

Query: 465  KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
            K   ++   + ++EM  +G +P+   +   I+  +K  + ++A  L  E+++  F P   
Sbjct: 843  KSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPC 902

Query: 525  TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM 584
            TY  L+ GL K G  E+A ++  +M+  G  P+ + Y  +I+   + G++    +LF  M
Sbjct: 903  TYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKM 962

Query: 585  LRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRI 644
            +++G+ P L +YT+L+      GR++ A  YF E+++ G+ P+ ++YN +INGL + RR+
Sbjct: 963  VKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRL 1022

Query: 645  DQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
            D+A  LF +M+  GI P+ YTY  LI     AG    A+++Y+E+    +EP   T++AL
Sbjct: 1023 DEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNAL 1082

Query: 705  L 705
            +
Sbjct: 1083 I 1083



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 149/495 (30%), Positives = 246/495 (49%), Gaps = 1/495 (0%)

Query: 211 CNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQ 270
           CN ++++LR+         V+ +M +  I  ++ TY T+  +   +G +  A   L +M 
Sbjct: 134 CNYMLEILREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMT 193

Query: 271 GRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLV 330
             G   N  +YN LI      G   +A  + + M+  G+K S  +Y+ ++     +G   
Sbjct: 194 EVGFILNAYSYNGLIH-LLLPGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTR 252

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
           + +NL EEM + G+ P + TY I I  L +  R+ DA   F EM  +   PD+I+Y  L+
Sbjct: 253 KIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLI 312

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
              C +G + +A  L+ ++R+ +  P  VTY TL+D   + GDLE  ++    M   G  
Sbjct: 313 DALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYA 372

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
           PDV+TYTI++   CK G++  A +  + M  KG+ P+   Y T I G LK     EA  L
Sbjct: 373 PDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALEL 432

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
            E M + G  P   +Y + +    K G   +A +    M   G +P      + ++   E
Sbjct: 433 LENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAE 492

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
            G +    D+FN++ + GLSP  VTY +L+  ++  G+++ A    SEM  KG  P+V+ 
Sbjct: 493 TGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMI 552

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
            N+LIN L +  R+D A+ +F  ++   + P   TY IL+      G   +AL L+  M 
Sbjct: 553 INSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMT 612

Query: 691 DREIEPDYCTHSALL 705
           +    P+  T ++LL
Sbjct: 613 ESGCPPNTITFNSLL 627



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 157/601 (26%), Positives = 269/601 (44%), Gaps = 73/601 (12%)

Query: 178  LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
            L +  Y K     + +  F  M + G++P +  CN  +  L + G   +A +++  + + 
Sbjct: 450  LFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKC 509

Query: 238  GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGC----------------------- 274
            G+ P  VTYN ++  + K G++ +A +LL EM  +GC                       
Sbjct: 510  GLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAA 569

Query: 275  ------------SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
                        +P  VTYN+L+TG  + G++ +A  L   M + G   +  ++N ++  
Sbjct: 570  WKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDC 629

Query: 323  YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
             S+   +  AL +   M      P + TYN +IYGL + GR+ D    FF  ++K + PD
Sbjct: 630  LSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRI-DYAFWFFHQMKKFLSPD 688

Query: 383  IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT------------------------- 417
             ++  TL+ G  R G + +A  +  E   +  + T                         
Sbjct: 689  YVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFA 748

Query: 418  -VVTYNT----------LIDGLCRYGDLEVAQQLKENMI-NQGILPDVITYTIMVNGSCK 465
             ++  N+          LI  LC+      AQ + +    N GI P + +Y  +++G   
Sbjct: 749  EILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLG 808

Query: 466  MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
                  A E F +M   G  P+ F Y   +    K    ++ Y L  EM ++G  P+ IT
Sbjct: 809  SNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAIT 868

Query: 526  YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
            +N+++  L K  +L +A +L  +++   F P   TY  +I   L+ G   +   +F  ML
Sbjct: 869  HNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEML 928

Query: 586  RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
              G  P  V Y +LI+     G ++ A   F +M  +GIRP++ +Y  L+  LC   RID
Sbjct: 929  DYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRID 988

Query: 646  QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            +A   F +++  G+ P+  +Y  +IN    +    EAL L+ EM +R I PD  T++AL+
Sbjct: 989  EAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALI 1048

Query: 706  L 706
            L
Sbjct: 1049 L 1049



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 144/520 (27%), Positives = 251/520 (48%), Gaps = 2/520 (0%)

Query: 186 KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVT 245
           K  + +      KM   G + +  + N +I +L   GF  +A +VY+ M   G+KPS+ T
Sbjct: 179 KGGIGRAPFALRKMTEVGFILNAYSYNGLIHLLLP-GFCNEALKVYKRMISEGMKPSMKT 237

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           Y+ ++ +  + G+ ++ + LL EM+  G  PN  TY + I    R   ++ A G+ ++M 
Sbjct: 238 YSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMD 297

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
             G      +Y  +I      G L +A  L  +M     +P   TY  L+    K G + 
Sbjct: 298 DEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLE 357

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
             +  + EM      PD+++Y  L+   C+SG++  AF + D + ++ + P + TYNT+I
Sbjct: 358 TVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMI 417

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
            GL +   L+ A +L ENM + G+ P   +Y + ++   K G+ + A + F  M ++G+ 
Sbjct: 418 CGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIM 477

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           P   A    +    + G  SEA  +  ++   G  PD +TYN+L+    K G +++A +L
Sbjct: 478 PSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQL 537

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
           L +M+  G  PD +   S+I+   + G +     +F  +    L+PT+VTY +L+     
Sbjct: 538 LSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGK 597

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
            G++  A   F  M   G  PN IT+N+L++ L +   +D A  +F  M      P+  T
Sbjct: 598 EGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLT 657

Query: 666 YTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           Y  +I      G    A   + +M  + + PDY T   L+
Sbjct: 658 YNTIIYGLIREGRIDYAFWFFHQM-KKFLSPDYVTLCTLI 696



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 140/507 (27%), Positives = 242/507 (47%), Gaps = 11/507 (2%)

Query: 191 QCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTML 250
           + L V+ +M+  G+ P +K  + ++  L   G + K   +   M   G++P+I TY   +
Sbjct: 218 EALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICI 277

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
            +  +   + +A  +  EM   GC P+ +TY VLI      G+L++A+ L   M     +
Sbjct: 278 RALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKM-----R 332

Query: 311 VSAHS-----YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
            S+HS     Y  ++  + + G L        EM   G AP + TY ILI  LCK G V 
Sbjct: 333 ASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVD 392

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
            A      M  K + P++ +YNT++ G  ++  + EA  L + + S  + PT  +Y   I
Sbjct: 393 RAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFI 452

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           D   + GD   A    E M  +GI+P +      +    + G +S A + FN++ + GL 
Sbjct: 453 DYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLS 512

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           PD   Y   +    K G   +A +L  EM++KG  PD++  N L++ L K G ++ A ++
Sbjct: 513 PDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKM 572

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
             ++      P  +TY  ++    + G + +  +LF +M   G  P  +T+  L+   + 
Sbjct: 573 FGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSK 632

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
              ++LA   F  M +    P+V+TYN +I GL R  RID A+  F  M ++ + P+  T
Sbjct: 633 NDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQM-KKFLSPDYVT 691

Query: 666 YTILINENCNAGNWQEALRLYKEMLDR 692
              LI      G  ++A+++  E + +
Sbjct: 692 LCTLIPGVVRHGRVEDAIKVVMEFVHQ 718



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 156/569 (27%), Positives = 269/569 (47%), Gaps = 38/569 (6%)

Query: 173  IKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR 232
            + I++ L+    K   V+    +F ++    L P V   N ++  L   G  +KA E++ 
Sbjct: 550  VMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFG 609

Query: 233  MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
             M E G  P+ +T+N++LD   K   +  AL++   M    C+P+ +TYN +I G  R G
Sbjct: 610  SMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREG 669

Query: 293  ELEQA---------------------------RGLIRDMLKL--------GLKVSAHSYN 317
             ++ A                            G + D +K+         L+ ++  + 
Sbjct: 670  RIDYAFWFFHQMKKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWG 729

Query: 318  PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
             ++     +  + EA++  E +V   V         LI  LCK  +  DA++  F+   K
Sbjct: 730  ELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQN-VFDKFTK 788

Query: 378  N--VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
            N  + P + SYN L+ G   S    +A  LF++++S    P   TYN L+D   +   + 
Sbjct: 789  NLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRIN 848

Query: 436  VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
                L   M ++G  P+ IT+ I+++   K  NL+ A + + E++     P    Y   I
Sbjct: 849  KLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLI 908

Query: 496  AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
             G LK G + +A ++ EEML  G  P+ + YN+L++G  K G ++ A EL +KMV +G  
Sbjct: 909  DGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIR 968

Query: 556  PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
            PD  +YT ++      G +      F  +   GL P  V+Y  +I+      RL+ A   
Sbjct: 969  PDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSL 1028

Query: 616  FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
            FSEM+ +GI P++ TYNALI  L    ++D A  ++ +++  G+ P+ +TY  LI  +  
Sbjct: 1029 FSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSL 1088

Query: 676  AGNWQEALRLYKEMLDREIEPDYCTHSAL 704
            +GN  +A  ++K+M+     P+  T + L
Sbjct: 1089 SGNKDQAFSVFKKMMVVGCSPNTETFAQL 1117



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 153/566 (27%), Positives = 267/566 (47%), Gaps = 38/566 (6%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
           +N+M  +G  PDV     +I+ L  +G   +A ++  +M   GI P++ TYNTM+    K
Sbjct: 363 WNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLK 422

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
              + EALELL  M+  G  P   +Y + I  + ++G+  +A      M K G+  S  +
Sbjct: 423 ARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAA 482

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
            N  +   +E G + EA ++  ++   G++P   TYN+L+    K G++  A     EM+
Sbjct: 483 CNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMI 542

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
            K   PD++  N+L+    ++G +  A+ +F  L++  L PTVVTYN L+ GL + G + 
Sbjct: 543 SKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKIL 602

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            A +L  +M   G  P+ IT+  +++   K   + +A + F  M      PD   Y T I
Sbjct: 603 KALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTII 662

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA------------- 542
            G ++ G    A+    +M  K   PD +T   L+ G+ + G +E+A             
Sbjct: 663 YGLIREGRIDYAFWFFHQM-KKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACL 721

Query: 543 -------NELLRKMVGDGFIPDHITYTSII---------HASLEMGDL---RR----GRD 579
                   EL+  ++ +  I + I++  I+         H  L +  +   R+     ++
Sbjct: 722 QTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQN 781

Query: 580 LFNNMLRK-GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           +F+   +  G+ PTL +Y  L+         E A   F +M+  G  PN  TYN L++  
Sbjct: 782 VFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAH 841

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
            + +RI++ Y L+ +M   G  PN  T+ I+I+    + N  +AL LY E++  +  P  
Sbjct: 842 GKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTP 901

Query: 699 CTHSALLLKQLDKDYKVHAVEYLESL 724
           CT+  L+   L       A++  E +
Sbjct: 902 CTYGPLIDGLLKAGRSEQAMKIFEEM 927



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 176/669 (26%), Positives = 297/669 (44%), Gaps = 88/669 (13%)

Query: 109  RFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLS 168
            RF+  +E   G   D   +  ++E L +SG +  A+             +LDV+   G+ 
Sbjct: 361  RFWNEMEVD-GYAPDVVTYTILIEALCKSGDVDRAF------------DMLDVMTTKGIF 407

Query: 169  SCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR 228
               ++   + ++    K   +++ L +   M   G+ P   +    I     +G   KA 
Sbjct: 408  P--NLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAI 465

Query: 229  EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
            + +  M + GI PSI   N  L +  + G + EA ++  ++   G SP+ VTYN+L+  +
Sbjct: 466  DTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCY 525

Query: 289  SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
            S+ G++++A  L+ +M+  G +      N +I    + G +  A  +   +    +APT+
Sbjct: 526  SKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTV 585

Query: 349  ATYNILIYGLCKWGRVSDARHRFFEMLRK------------------------------- 377
             TYNIL+ GL K G++  A   F  M                                  
Sbjct: 586  VTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCR 645

Query: 378  ----NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
                N  PD+++YNT++YG  R G I  AF  F +++ + L P  VT  TLI G+ R+G 
Sbjct: 646  MTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMK-KFLSPDYVTLCTLIPGVVRHGR 704

Query: 434  LEVA--------------------QQLKENMINQGILPDVITYT-IMVNGS--------- 463
            +E A                     +L E ++ +  + + I++  I+V  S         
Sbjct: 705  VEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVML 764

Query: 464  ------CKMGNLSMAREFFNEMLRK-GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA 516
                  CK      A+  F++  +  G+ P   +Y   + G L    T +A  L E+M +
Sbjct: 765  PLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKS 824

Query: 517  KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
             G  P+  TYN+L+    K   + +  +L  +M   G  P+ IT+  II A ++  +L +
Sbjct: 825  AGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNK 884

Query: 577  GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
              DL+  ++    SPT  TY  LI      GR E A   F EM   G  PN + YN LIN
Sbjct: 885  ALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILIN 944

Query: 637  GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
            G  +   ID A  LF  M +EGI P+  +YTIL+   C  G   EA++ ++E+    ++P
Sbjct: 945  GFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDP 1004

Query: 697  DYCTHSALL 705
            D  +++ ++
Sbjct: 1005 DTVSYNFII 1013



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 148/538 (27%), Positives = 245/538 (45%), Gaps = 38/538 (7%)

Query: 177  DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
            ++LL    K+  + + L +F  M  +G  P+    N ++  L  N     A +++  M  
Sbjct: 589  NILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTM 648

Query: 237  FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
                P ++TYNT++    +EG +  A     +M+ +  SP+ VT   LI G  R+G +E 
Sbjct: 649  MNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMK-KFLSPDYVTLCTLIPGVVRHGRVED 707

Query: 297  ARGLIRDMLKLG-LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR------------- 342
            A  ++ + +    L+ ++  +  ++     +  + EA++  E +V               
Sbjct: 708  AIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLI 767

Query: 343  -----------------------GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
                                   G+ PTL +YN L+ GL        A   F +M     
Sbjct: 768  KVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGT 827

Query: 380  IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
             P+  +YN LL  + +S  I + + L+ E+RSR   P  +T+N +I  L +  +L  A  
Sbjct: 828  HPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALD 887

Query: 440  LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
            L   +++    P   TY  +++G  K G    A + F EML  G  P+   Y   I G  
Sbjct: 888  LYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFG 947

Query: 500  KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
            K G+   A  L ++M+ +G  PDL +Y +LV  LC  G ++EA +   ++   G  PD +
Sbjct: 948  KSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTV 1007

Query: 560  TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
            +Y  II+   +   L     LF+ M  +G+SP L TY  LI      G++++A   + E+
Sbjct: 1008 SYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEEL 1067

Query: 620  QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
            Q+ G+ P+V TYNALI G       DQA+ +F  M   G  PN  T+  L N+   AG
Sbjct: 1068 QLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAG 1125



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 143/508 (28%), Positives = 231/508 (45%), Gaps = 38/508 (7%)

Query: 179  LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
            LL   +K   V+  L +F +M      PDV   N II  L   G    A   +  M +F 
Sbjct: 626  LLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKF- 684

Query: 239  IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGC-SPNGVTYNVLITGFSRNGELEQA 297
            + P  VT  T++    + G +++A++++ E   + C   N   +  L+       E+E+A
Sbjct: 685  LSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEA 744

Query: 298  RG-------------------LIRDMLK-----------------LGLKVSAHSYNPIIC 321
                                 LI+ + K                 LG+  +  SYN ++ 
Sbjct: 745  ISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMD 804

Query: 322  GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
            G        +AL L E+M + G  P   TYN+L+    K  R++     + EM  +   P
Sbjct: 805  GLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEP 864

Query: 382  DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
            + I++N ++    +S N+ +A  L+ EL S +  PT  TY  LIDGL + G  E A ++ 
Sbjct: 865  NAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIF 924

Query: 442  ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
            E M++ G  P+ + Y I++NG  K G +  A E F +M+++G++PD  +YT  +      
Sbjct: 925  EEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCIT 984

Query: 502  GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
            G   EA +  EE+   G  PD ++YN +++GL K   L+EA  L  +M   G  PD  TY
Sbjct: 985  GRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTY 1044

Query: 562  TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
             ++I      G +     ++  +   GL P++ TY  LI  H+  G  + AF  F +M V
Sbjct: 1045 NALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMV 1104

Query: 622  KGIRPNVITYNALINGLCRLRRIDQAYG 649
             G  PN  T+  L N   R   +   +G
Sbjct: 1105 VGCSPNTETFAQLPNKYPRAGLVHNPFG 1132



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 123/255 (48%), Gaps = 9/255 (3%)

Query: 154  NMHGILDV---LIGGGLSS--CVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDV 208
            N++  LD+   L+ G  S   C    ++D LL    K    EQ + +F +ML  G  P+ 
Sbjct: 881  NLNKALDLYYELMSGDFSPTPCTYGPLIDGLL----KAGRSEQAMKIFEEMLDYGCGPNS 936

Query: 209  KNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWE 268
               N +I     +G    A E+++ M + GI+P + +Y  +++  C  G + EA++   E
Sbjct: 937  VIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEE 996

Query: 269  MQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
            ++  G  P+ V+YN +I G  ++  L++A  L  +M   G+    ++YN +I      G 
Sbjct: 997  LKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGK 1056

Query: 329  LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNT 388
            +  A+ + EE+   G+ P++ TYN LI G    G    A   F +M+     P+  ++  
Sbjct: 1057 VDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQ 1116

Query: 389  LLYGYCRSGNIGEAF 403
            L   Y R+G +   F
Sbjct: 1117 LPNKYPRAGLVHNPF 1131



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 56/117 (47%)

Query: 185  KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
            K   +++ L +F++M   G+ PD+   N +I  L   G    A ++Y  +   G++PS+ 
Sbjct: 1018 KSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVF 1077

Query: 245  TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
            TYN ++      G   +A  +  +M   GCSPN  T+  L   + R G +    G +
Sbjct: 1078 TYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAGLVHNPFGAV 1134


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 148/487 (30%), Positives = 256/487 (52%), Gaps = 15/487 (3%)

Query: 174 KILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNC--NRIIKVLRDNGFSVKAREVY 231
           ++ ++++  Y +   ++  +  FN+M+  G +P   NC  N +  V+  + F+    + +
Sbjct: 95  RLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPG-SNCFNNLLTFVVGSSSFN----QWW 149

Query: 232 RMMGEFGIKP--SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
               E  IK    + ++  ++   C+ GE++++ +LL E++  G SPN V Y  LI G  
Sbjct: 150 CFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCC 209

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           + GE+E+A+ L  +M K GL  +  +Y  +I G  + G+  +   + E+M   GV P L 
Sbjct: 210 KKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLH 269

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           TYN ++  LCK GR  DA   F EM  + V  +I++YNTL+ G CR     EA  + D++
Sbjct: 270 TYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQM 329

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
           +S  + P ++TYNTLIDG C    L  A  L  ++ ++G+ P ++TY I+V+G CK G+ 
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDT 389

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
           S A +   EM  +G++P +  YT  I    +  +  +A +L+  M   G  PD+ TY+VL
Sbjct: 390 SGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVL 449

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           +HG C  G + EA+ L + MV   F P+ + Y +++    + G   R   LF  M  K L
Sbjct: 450 IHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKEL 509

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
            P + +Y  +I       + + A     +M   GI P+    ++++N + R +  + ++ 
Sbjct: 510 PPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPS----DSILNLISRAK--NDSHS 563

Query: 650 LFIDMEE 656
             +D EE
Sbjct: 564 RSMDEEE 570



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 125/397 (31%), Positives = 210/397 (52%), Gaps = 1/397 (0%)

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
           K  +  Y  II  Y +   L  ++    EMV +G  P    +N L+  +       +   
Sbjct: 91  KTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSF-NQWW 149

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
            FF   +  V+ D+ S+  ++ G C +G I ++F L  ELR     P VV Y TLIDG C
Sbjct: 150 CFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCC 209

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
           + G++E A+ L   M   G++ +  TYT++++G  K G      E + +M   G+ P+  
Sbjct: 210 KKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLH 269

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
            Y   +    K G T +A+++ +EM  +G   +++TYN L+ GLC+     EANE++ +M
Sbjct: 270 TYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQM 329

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRL 609
             DG  P+ ITY ++I     +  L +   L  ++  +GLSP+LVTY +L+     +G  
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDT 389

Query: 610 ELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL 669
             A     EM+ +GI+P+ +TY  LI+   R   +++A  L   MEE G+ P+ +TY++L
Sbjct: 390 SGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVL 449

Query: 670 INENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
           I+  C  G   EA RL+K M++++ EP+   ++ ++L
Sbjct: 450 IHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVL 486



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 229/451 (50%), Gaps = 1/451 (0%)

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           Y  +++++ +   +  ++    EM  +G  P    +N L+T    +    Q      +  
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNES- 155

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
           K+ + +  +S+  +I G  E G + ++ +L  E+   G +P +  Y  LI G CK G + 
Sbjct: 156 KIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
            A+  FFEM +  ++ +  +Y  L++G  ++G   + F ++++++   + P + TYN ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVM 275

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           + LC+ G  + A ++ + M  +G+  +++TY  ++ G C+    + A E  ++M   G+ 
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGIN 335

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           P+   Y T I G   +    +A  L  ++ ++G  P L+TYN+LV G CK G    A ++
Sbjct: 336 PNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
           +++M   G  P  +TYT +I       ++ +   L ++M   GL+P + TY+VLIH    
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCI 455

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
           +GR+  A   F  M  K   PN + YN ++ G C+     +A  LF +MEE+ + PN  +
Sbjct: 456 KGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVAS 515

Query: 666 YTILINENCNAGNWQEALRLYKEMLDREIEP 696
           Y  +I   C     +EA  L ++M+D  I P
Sbjct: 516 YRYMIEVLCKERKSKEAEGLVEKMIDSGIGP 546



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 120/383 (31%), Positives = 197/383 (51%)

Query: 280 TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
           ++ ++I G    GE+E++  L+ ++ + G   +   Y  +I G  +KG + +A +L  EM
Sbjct: 165 SFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
              G+     TY +LI+GL K G        + +M    V P++ +YN ++   C+ G  
Sbjct: 225 GKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRT 284

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
            +AF +FDE+R R +   +VTYNTLI GLCR      A ++ + M + GI P++ITY  +
Sbjct: 285 KDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTL 344

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           ++G C +  L  A     ++  +GL P    Y   ++G  K GDTS A ++ +EM  +G 
Sbjct: 345 IDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGI 404

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
            P  +TY +L+    +  ++E+A +L   M   G  PD  TY+ +IH     G +     
Sbjct: 405 KPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASR 464

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
           LF +M+ K   P  V Y  ++  +   G    A   F EM+ K + PNV +Y  +I  LC
Sbjct: 465 LFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLC 524

Query: 640 RLRRIDQAYGLFIDMEEEGILPN 662
           + R+  +A GL   M + GI P+
Sbjct: 525 KERKSKEAEGLVEKMIDSGIGPS 547



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 188/366 (51%), Gaps = 14/366 (3%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G+  +E+ +  ++  L ++G+ +  + + E +     HG+   L      +CV  ++   
Sbjct: 228 GLVANEWTYTVLIHGLFKNGIKKQGFEMYEKM---QEHGVFPNL---HTYNCVMNQL--- 278

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
                 K    +    VF++M   G+  ++   N +I  L     + +A EV   M   G
Sbjct: 279 -----CKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDG 333

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           I P+++TYNT++D FC   ++ +AL L  +++ RG SP+ VTYN+L++GF + G+   A 
Sbjct: 334 INPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAG 393

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            ++++M + G+K S  +Y  +I  ++    + +A+ L   M   G+ P + TY++LI+G 
Sbjct: 394 KVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGF 453

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C  GR+++A   F  M+ K   P+ + YNT++ GYC+ G+   A  LF E+  + L P V
Sbjct: 454 CIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNV 513

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
            +Y  +I+ LC+    + A+ L E MI+ GI P      ++        + SM  E    
Sbjct: 514 ASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSILNLISRAKNDSHSRSMDEEEPAS 573

Query: 479 MLRKGL 484
           M+  GL
Sbjct: 574 MVFDGL 579


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 130/435 (29%), Positives = 237/435 (54%)

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           ++ ++ +A+ L  EM      P+ V +N L++   +  + +    L + M  LG++   +
Sbjct: 62  RDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLY 121

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           ++N +I  +     +  AL++  +M+  G  P   T   L+ G C+  RVSDA     +M
Sbjct: 122 TFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           +     PDI++YN ++   C++  + +A   F E+  + + P VVTY  L++GLC  G  
Sbjct: 182 VEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRW 241

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
             A +L  +MI + I P+VITY+ +++   K G +  A+E F EM+R  + PD   Y++ 
Sbjct: 242 NDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSL 301

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I G        EA ++ + M++KG  PD+++YN L++G CK   +E+  +L RKM   G 
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGL 361

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
           + + +TY ++I    ++GD+ + ++ F+ M   G+SP + TY +L+      G LE A +
Sbjct: 362 VNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALV 421

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F +MQ   +  +++TY  +I G+C+  +++ A+GLF  +  +G+ P+  TYT +++  C
Sbjct: 422 IFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLC 481

Query: 675 NAGNWQEALRLYKEM 689
             G   E   LY +M
Sbjct: 482 TKGLQHEVEALYTKM 496



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 127/436 (29%), Positives = 232/436 (53%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A  ++R M +    PSIV +N +L +  K  +    + L  +M+  G   +  T+N++I 
Sbjct: 69  AINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
            F    ++  A  ++  MLKLG +    +   ++ G+  +  + +A++L ++MV  G  P
Sbjct: 129 CFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRP 188

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
            +  YN +I  LCK  RV+DA   F E+ RK + P++++Y  L+ G C SG   +A  L 
Sbjct: 189 DIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLL 248

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
            ++  R + P V+TY+ L+D   + G +  A+++ E M+   I PD++TY+ ++NG C  
Sbjct: 249 RDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLH 308

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
             +  A + F+ M+ KG  PD  +Y T I G  K     +  +L  +M  +G   + +TY
Sbjct: 309 DRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTY 368

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           N L+ G  ++G +++A E   +M   G  PD  TY  ++    + G L +   +F +M +
Sbjct: 369 NTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQK 428

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
             +   +VTYT +I      G++E A+  F  + +KG++P+++TY  +++GLC      +
Sbjct: 429 SEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHE 488

Query: 647 AYGLFIDMEEEGILPN 662
              L+  M++EG++ N
Sbjct: 489 VEALYTKMKQEGLMKN 504



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 127/432 (29%), Positives = 223/432 (51%), Gaps = 1/432 (0%)

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           R+ +L  A  L R+M+K     S   +N ++    +       ++L ++M   G+   L 
Sbjct: 62  RDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLY 121

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           T+NI+I   C   +VS A     +ML+    PD ++  +L+ G+CR   + +A  L D++
Sbjct: 122 TFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
                 P +V YN +ID LC+   +  A    + +  +GI P+V+TYT +VNG C  G  
Sbjct: 182 VEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRW 241

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
           + A     +M+++ + P+   Y+  +   +K G   EA  + EEM+     PD++TY+ L
Sbjct: 242 NDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSL 301

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           ++GLC    ++EAN++   MV  G  PD ++Y ++I+   +   +  G  LF  M ++GL
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGL 361

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
               VTY  LI      G ++ A  +FS+M   G+ P++ TYN L+ GLC    +++A  
Sbjct: 362 VNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALV 421

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQL 709
           +F DM++  +  +  TYT +I   C  G  ++A  L+  +  + ++PD  T++ ++    
Sbjct: 422 IFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLC 481

Query: 710 DKDYKVHAVEYL 721
            K  + H VE L
Sbjct: 482 TKGLQ-HEVEAL 492



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 200/374 (53%), Gaps = 6/374 (1%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + +++ V   + + +KM+  G  PD+   N II  L        A + ++ +G  GI+P+
Sbjct: 165 FCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPN 224

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +VTY  +++  C  G   +A  LL +M  R  +PN +TY+ L+  F +NG++ +A+ +  
Sbjct: 225 VVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFE 284

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M+++ +     +Y+ +I G      + EA  + + MV++G  P + +YN LI G CK  
Sbjct: 285 EMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAK 344

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           RV D    F +M ++ ++ + ++YNTL+ G+ + G++ +A   F ++ S  + P + TYN
Sbjct: 345 RVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYN 404

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            L+ GLC  G LE A  + E+M    +  D++TYT ++ G CK G +  A   F  +  K
Sbjct: 405 ILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLK 464

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           GL+PD   YTT ++G    G   E   L  +M  +G    +   ++L  G    G +  +
Sbjct: 465 GLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGL---MKNDSMLCLG---DGDITIS 518

Query: 543 NELLRKMVGDGFIP 556
            EL++KM+  G+ P
Sbjct: 519 AELIKKMLSCGYAP 532



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/277 (28%), Positives = 145/277 (52%), Gaps = 8/277 (2%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL  + K   V +   +F +M+R  + PD+   + +I  L  +    +A +++ +M   G
Sbjct: 266 LLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG 325

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
             P +V+YNT+++ FCK   +++ ++L  +M  RG   N VTYN LI GF + G++++A+
Sbjct: 326 CFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQ 385

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
                M   G+     +YN ++ G  + GLL +AL + E+M    +   + TY  +I G+
Sbjct: 386 EFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGM 445

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           CK G+V DA   F  +  K + PDI++Y T++ G C  G   E   L+ +++   L+   
Sbjct: 446 CKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKND 505

Query: 419 VTYNTLIDGLC-RYGDLEVAQQLKENMINQGILPDVI 454
                    LC   GD+ ++ +L + M++ G  P ++
Sbjct: 506 SM-------LCLGDGDITISAELIKKMLSCGYAPSLL 535



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 114/227 (50%), Gaps = 3/227 (1%)

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
           ++KL D    +R   EM+     P ++ +N L+  + K+   +    L +KM   G   D
Sbjct: 63  DIKLHDAINLFR---EMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRND 119

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
             T+  +I+       +     +   ML+ G  P  VT   L++    R R+  A     
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
           +M   G RP+++ YNA+I+ LC+ RR++ A   F ++  +GI PN  TYT L+N  CN+G
Sbjct: 180 KMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSG 239

Query: 678 NWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
            W +A RL ++M+ R+I P+  T+SALL   +     + A E  E +
Sbjct: 240 RWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEM 286


>gi|449488446|ref|XP_004158042.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g11710, mitochondrial-like [Cucumis sativus]
          Length = 653

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 185/663 (27%), Positives = 308/663 (46%), Gaps = 49/663 (7%)

Query: 49  VLNPESESYYKELIISTVEEKPWAFCNNRWVSDHFQAVVSDPELLVRVLNRIREKPRIAL 108
           +L+P +E    + I   ++++ W F     VS           L+ RV+   R  P++AL
Sbjct: 24  LLSPSTEDIICKAICVNLKQRRWKFLEQ--VSPSLT-----NSLVCRVVREFRNSPQLAL 76

Query: 109 RFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLS 168
            F+ WVE +          CT++ +L+ S     A  ++E+++  N    L+VL  GGL 
Sbjct: 77  EFYNWVEARDNFSHSLESRCTLVHVLVNSRNFNDALSIMESLILXNGKSPLEVL--GGLM 134

Query: 169 SCVSI-----KILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGF 223
           +   I      +    +   T+   VE    V  K+   G    +   N  + +L   G 
Sbjct: 135 NSYEICNSNPAVFXARVRTCTQLRSVEGAYDVIRKLRLEGFWVTIHAWNNFLNLLLKLGE 194

Query: 224 SVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNV 283
           + K   +Y+ M   G   ++ T+N ++ + C E ++ EA+ +++ M      PN VT+N+
Sbjct: 195 TDKFXNMYKEMIASGYSENVNTFNLIIYALCNECKLLEAIYVVYLMLKIEIWPNVVTFNM 254

Query: 284 LITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG 343
           +I   ++ GE++ A  L R+               +I G S                   
Sbjct: 255 IIDKANKMGEMDLALKLTRN-------------TEVISGGS------------------- 282

Query: 344 VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF 403
           V+P +  YN +I G CK  R+  A++   EM++  +  +  +Y TL+ GY R G++  AF
Sbjct: 283 VSPNIVAYNCIINGFCKIRRLESAKNVLGEMIKLGIYFNERTYATLIDGYARKGSLDVAF 342

Query: 404 LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
            L DE+    L+P    YN+LI  L   G+LE A  L  +MIN+ ILPD  TY+I+  G 
Sbjct: 343 RLCDEMVEMRLIPDTFVYNSLIYWLYMEGELEEASFLLSDMINRRILPDEFTYSILTKGL 402

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
           C  G+L+ A      ++ + L  D F Y   I    +  + + A +L   M+  G  PD+
Sbjct: 403 CVSGHLNKALRVHYYIVERSLVRDAFTYNILINYMFQSRNIAGAKQLLSSMIVGGIKPDM 462

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
           +TY   V G CK G +E A ++  K V      + + Y SI+    + G +   + L + 
Sbjct: 463 VTYGTPVDGHCKEGKIEAAVQIYDKTVKADGKSNLVVYNSILDGLCKQGSIYAAKLLVDK 522

Query: 584 MLRKG-LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
           + + G L P  VTY  L+H     G +E AF  F EM   G   N+++YN +I+ LC++ 
Sbjct: 523 LQQNGFLDP--VTYNTLLHGFCVNGEIEKAFALFLEMINVGSLVNIVSYNIMIHFLCKMG 580

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
            I QA  L   M  +GI+P+  TYT LI         ++ + L+  M+ +   PD  T+ 
Sbjct: 581 LIQQAMELMRAMSSQGIIPDLITYTTLITNFVEICGSKDVIELHDYMVLKGAVPDRKTYR 640

Query: 703 ALL 705
           + +
Sbjct: 641 SFV 643



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 83/320 (25%), Positives = 150/320 (46%), Gaps = 4/320 (1%)

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
           ++ E+ +      V T+N +I  LC    L  A  +   M+   I P+V+T+ ++++ + 
Sbjct: 201 MYKEMIASGYSENVNTFNLIIYALCNECKLLEAIYVVYLMLKIEIWPNVVTFNMIIDKAN 260

Query: 465 KMGNLSMAREFF--NEMLRKG-LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
           KMG + +A +     E++  G + P+  AY   I G  K+     A  +  EM+  G   
Sbjct: 261 KMGEMDLALKLTRNTEVISGGSVSPNIVAYNCIINGFCKIRRLESAKNVLGEMIKLGIYF 320

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           +  TY  L+ G  + GSL+ A  L  +MV    IPD   Y S+I+     G+L     L 
Sbjct: 321 NERTYATLIDGYARKGSLDVAFRLCDEMVEMRLIPDTFVYNSLIYWLYMEGELEEASFLL 380

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
           ++M+ + + P   TY++L       G L  A      +  + +  +  TYN LIN + + 
Sbjct: 381 SDMINRRILPDEFTYSILTKGLCVSGHLNKALRVHYYIVERSLVRDAFTYNILINYMFQS 440

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
           R I  A  L   M   GI P+  TY   ++ +C  G  + A+++Y + +  + + +   +
Sbjct: 441 RNIAGAKQLLSSMIVGGIKPDMVTYGTPVDGHCKEGKIEAAVQIYDKTVKADGKSNLVVY 500

Query: 702 SALLLKQLDKDYKVHAVEYL 721
           ++ +L  L K   ++A + L
Sbjct: 501 NS-ILDGLCKQGSIYAAKLL 519



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 122/256 (47%), Gaps = 3/256 (1%)

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
           + EM+  G   +   +   I          EA  +   ML     P+++T+N+++    K
Sbjct: 202 YKEMIASGYSENVNTFNLIIYALCNECKLLEAIYVVYLMLKIEIWPNVVTFNMIIDKANK 261

Query: 536 LGSLEEANELLRK---MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           +G ++ A +L R    + G    P+ + Y  II+   ++  L   +++   M++ G+   
Sbjct: 262 MGEMDLALKLTRNTEVISGGSVSPNIVAYNCIINGFCKIRRLESAKNVLGEMIKLGIYFN 321

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
             TY  LI  +A +G L++AF    EM    + P+   YN+LI  L     +++A  L  
Sbjct: 322 ERTYATLIDGYARKGSLDVAFRLCDEMVEMRLIPDTFVYNSLIYWLYMEGELEEASFLLS 381

Query: 653 DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
           DM    ILP+++TY+IL    C +G+  +ALR++  +++R +  D  T++ L+       
Sbjct: 382 DMINRRILPDEFTYSILTKGLCVSGHLNKALRVHYYIVERSLVRDAFTYNILINYMFQSR 441

Query: 713 YKVHAVEYLESLTLGA 728
               A + L S+ +G 
Sbjct: 442 NIAGAKQLLSSMIVGG 457


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 139/436 (31%), Positives = 239/436 (54%), Gaps = 3/436 (0%)

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           +A  + R M   G++  +VTY T++   C   E+  ALELL EM G G  PN + Y+ L+
Sbjct: 133 EAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLL 192

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            G+ R+G  +    +  +M +LG++     +   I    +KG + +A+ +++ MV RG+ 
Sbjct: 193 RGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLE 252

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P + TYN+LI  LCK G V +A     EM  K V PD+++YNTL+ G      +  A  L
Sbjct: 253 PNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGL 312

Query: 406 FDEL-RSRNLV-PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
            +E+ +   LV P VVT+N++I GLC+ G +  A  ++E M  +G + +++TY  ++ G 
Sbjct: 313 LEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGF 372

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
            ++  ++MA    +E++  GL+PD F Y+  I G  KL +   A      M  +G   +L
Sbjct: 373 LRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAEL 432

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
             Y  L+  LC+LG +E+A  L  +M  +  + D + Y+++++ + + GD++  + L  +
Sbjct: 433 FHYIPLLAALCQLGMMEQAMVLFNEMDMNCGL-DAVAYSTMMYGACKSGDIKAAKQLLQD 491

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           ML +GL+P  VTY++LI+  A  G LE A     +M   G  P+V  +++LI G     +
Sbjct: 492 MLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQ 551

Query: 644 IDQAYGLFIDMEEEGI 659
           I++   L  +M  + +
Sbjct: 552 INKILDLIHEMRAKNV 567



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 144/469 (30%), Positives = 242/469 (51%), Gaps = 9/469 (1%)

Query: 244 VTYNTMLDSFCKEG-EMQEALELLWEMQGRG---CSPNGVTYNVLITGFSRNGELEQARG 299
           V+YN +L + C+ G ++++AL LL +M         PN V+Y +++ G   +   ++A  
Sbjct: 77  VSYNIVLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVA 136

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
           L+R M   G++    +Y  +I G  +   L  AL L  EM   GV P +  Y+ L+ G C
Sbjct: 137 LLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYC 196

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
           + GR  D    F EM R  V PD+I +   +   C+ G IG+A  + D +  R L P VV
Sbjct: 197 RSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVV 256

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
           TYN LI+ LC+ G +  A  L+  M ++G+ PDV+TY  ++ G   +  +  A     EM
Sbjct: 257 TYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEM 316

Query: 480 LRKG--LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           ++    ++PD   + + I G  K+G   +A  ++E M  +G   +L+TYN L+ G  ++ 
Sbjct: 317 IQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVH 376

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            +  A  L+ +++  G  PD  TY+ +I+   ++ ++ R       M ++G+   L  Y 
Sbjct: 377 KVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYI 436

Query: 598 VLIHAHAARGRLELAFMYFSEMQVK-GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
            L+ A    G +E A + F+EM +  G+  + + Y+ ++ G C+   I  A  L  DM +
Sbjct: 437 PLLAALCQLGMMEQAMVLFNEMDMNCGL--DAVAYSTMMYGACKSGDIKAAKQLLQDMLD 494

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           EG+ P+  TY+ILIN     G+ +EA R+ K+M      PD     +L+
Sbjct: 495 EGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLI 543



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 145/511 (28%), Positives = 246/511 (48%), Gaps = 19/511 (3%)

Query: 205 LPDVKNC---NRIIKVLRDNGFSVKAREVYRMMGEF------GIKPSIVTYNTMLDSFCK 255
           LPDV++    N ++  L   G  +  R+   ++ +         +P+ V+Y  ++   C 
Sbjct: 70  LPDVRDAVSYNIVLAALCRRGGDL--RQALSLLADMSREAHPAARPNAVSYTMVMRGLCA 127

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
                EA+ LL  MQ  G   + VTY  LI G     EL+ A  L+ +M   G+  +   
Sbjct: 128 SRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIV 187

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           Y+ ++ GY   G   +   + EEM   GV P +  +   I  LCK GR+  A      M+
Sbjct: 188 YSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMV 247

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
           ++ + P++++YN L+   C+ G++ EA  L +E+  + + P VVTYNTLI GL    +++
Sbjct: 248 QRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMD 307

Query: 436 VAQQLKENMINQGIL--PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
            A  L E MI    L  PDV+T+  +++G CK+G +  A      M  +G   +   Y  
Sbjct: 308 GAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNY 367

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            I G L++   + A  L  E+++ G  PD  TY++L++G  KL  ++ A   LR M   G
Sbjct: 368 LIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRG 427

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNM-LRKGLSPTLVTYTVLIHAHAARGRLELA 612
              +   Y  ++ A  ++G + +   LFN M +  GL    V Y+ +++     G ++ A
Sbjct: 428 IRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMNCGLDA--VAYSTMMYGACKSGDIKAA 485

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
                +M  +G+ P+ +TY+ LIN   +L  +++A  +   M   G +P+   +  LI  
Sbjct: 486 KQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKG 545

Query: 673 NCNAGNWQEALRLYKEMLDRE--IEPDY-CT 700
               G   + L L  EM  +   I+P + CT
Sbjct: 546 YSAEGQINKILDLIHEMRAKNVAIDPKFICT 576



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 133/446 (29%), Positives = 227/446 (50%), Gaps = 20/446 (4%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           A+   R ++   GV+ D   + T++  L ++  L  A              +L  + G G
Sbjct: 134 AVALLRSMQAS-GVRADVVTYGTLIRGLCDAAELDGALE------------LLGEMCGSG 180

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
           +    ++ +   LL  Y +    +    VF +M R G+ PDV      I  L   G   K
Sbjct: 181 VHP--NVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGK 238

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A +V  +M + G++P++VTYN +++  CKEG ++EAL L  EM  +G +P+ VTYN LI 
Sbjct: 239 AVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIA 298

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAH--SYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           G S   E++ A GL+ +M++    V     ++N +I G  + G + +A+++ E M  RG 
Sbjct: 299 GLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGC 358

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
              L TYN LI G  +  +V+ A +   E++   + PD  +Y+ L+ G+ +   +  A +
Sbjct: 359 MCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEM 418

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM-INQGILPDVITYTIMVNGS 463
               +  R +   +  Y  L+  LC+ G +E A  L   M +N G+  D + Y+ M+ G+
Sbjct: 419 FLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMNCGL--DAVAYSTMMYGA 476

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
           CK G++  A++   +ML +GL PD   Y+  I    KLGD  EA R+ ++M A GF PD+
Sbjct: 477 CKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDV 536

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKM 549
             ++ L+ G    G + +  +L+ +M
Sbjct: 537 AVFDSLIKGYSAEGQINKILDLIHEM 562



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 161/338 (47%), Gaps = 44/338 (13%)

Query: 378 NVIPDI---ISYNTLLYGYCRSGN------------------------------------ 398
           + +PD+   +SYN +L   CR G                                     
Sbjct: 68  SALPDVRDAVSYNIVLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCA 127

Query: 399 ---IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
                EA  L   +++  +   VVTY TLI GLC   +L+ A +L   M   G+ P+VI 
Sbjct: 128 SRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIV 187

Query: 456 YTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML 515
           Y+ ++ G C+ G      + F EM R G++PD   +T  I    K G   +A ++++ M+
Sbjct: 188 YSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMV 247

Query: 516 AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLR 575
            +G  P+++TYNVL++ LCK GS+ EA  L  +M   G  PD +TY ++I     + ++ 
Sbjct: 248 QRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMD 307

Query: 576 RGRDLFNNMLRKG--LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
               L   M++    + P +VT+  +IH     GR+  A      M  +G   N++TYN 
Sbjct: 308 GAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNY 367

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
           LI G  R+ +++ A  L  ++   G+ P+ +TY+ILIN
Sbjct: 368 LIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILIN 405



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 186/373 (49%), Gaps = 21/373 (5%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           GV+ D  +F   ++ L + G +  A  V             D+++  GL    ++   ++
Sbjct: 215 GVEPDVIMFTGFIDDLCKKGRIGKAVKVK------------DIMVQRGLEP--NVVTYNV 260

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK----VLRDNGFSVKAREVYRMM 234
           L+    K+  V + L + N+M   G+ PDV   N +I     VL  +G      E+ +  
Sbjct: 261 LINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQ-- 318

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
           G+  ++P +VT+N+++   CK G M++A+ +   M  RGC  N VTYN LI GF R  ++
Sbjct: 319 GDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKV 378

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
             A  L+ +++  GL+  + +Y+ +I G+S+   +  A      M  RG+   L  Y  L
Sbjct: 379 NMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPL 438

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           +  LC+ G +  A   F EM   N   D ++Y+T++YG C+SG+I  A  L  ++    L
Sbjct: 439 LAALCQLGMMEQAMVLFNEM-DMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGL 497

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P  VTY+ LI+   + GDLE A+++ + M   G +PDV  +  ++ G    G ++   +
Sbjct: 498 APDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILD 557

Query: 475 FFNEMLRKGLQPD 487
             +EM  K +  D
Sbjct: 558 LIHEMRAKNVAID 570


>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 701

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 147/495 (29%), Positives = 252/495 (50%), Gaps = 5/495 (1%)

Query: 214 IIKVLRDNGFSVKAREVYRMMGE-FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR 272
           +IK    N  S KA + ++ M + FG KP + +YNT+L++F +  E   A       +  
Sbjct: 86  VIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESM 145

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA 332
             SPN  TYN+LI    +  ++E+A  L+  M    LK    SY  +I G  + G L+ A
Sbjct: 146 DVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGA 205

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN--VIPDIISYNTLL 390
           L + +EM  RGV   +  YN+LI G  K G   D     +E L K+  V P++++YN ++
Sbjct: 206 LKVFDEMSVRGVVADVTCYNMLIDGFFKHGDY-DKGKEIWERLVKDCSVYPNVVTYNIMI 264

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
            G C+ G   E+  +++ +        + TY++LI GLC  G+++ A ++ + ++   ++
Sbjct: 265 NGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLV 324

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
            D +T+  M+NG C+ G +  + E +  M ++  Q    +Y   I G  + G   EA  +
Sbjct: 325 VDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQT-VVSYNILIKGLFENGKVEEAISI 383

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
            E +  KG  P+  TY VL+HGLCK G L +A ++ ++        D   Y+S++    +
Sbjct: 384 WELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCK 443

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
            G +     + N M ++G          LI+      +LE A  +F EM+ KG  P +++
Sbjct: 444 EGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVS 503

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           YN LI GLC+  R  +AY    +M E+   P+  T ++L++  C     + AL L+++ L
Sbjct: 504 YNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQAL 563

Query: 691 DREIEPDYCTHSALL 705
           D+  +PD   ++ L+
Sbjct: 564 DKGFKPDITMYNILM 578



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 147/537 (27%), Positives = 267/537 (49%), Gaps = 6/537 (1%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           +++  ++L+ I  KK  +E+ + + + M    L PDV +   +I  +   G  + A +V+
Sbjct: 150 NLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVF 209

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCS--PNGVTYNVLITGFS 289
             M   G+   +  YN ++D F K G+  +  E+ WE   + CS  PN VTYN++I G  
Sbjct: 210 DEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEI-WERLVKDCSVYPNVVTYNIMINGLC 268

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           + G  +++  +   M K   +    +Y+ +I G  E G +  A+ + +E+V   +     
Sbjct: 269 KCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAV 328

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           T+N ++ G C+ G++ ++   +  M ++N    ++SYN L+ G   +G + EA  +++ L
Sbjct: 329 THNAMLNGFCRAGKIKESFELWMVMGKENC-QTVVSYNILIKGLFENGKVEEAISIWELL 387

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL-KENMINQGILPDVITYTIMVNGSCKMGN 468
             +   P   TY  LI GLC+ G L  A ++ KE     G L D   Y+ MV+G CK G 
Sbjct: 388 CKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKL-DAYAYSSMVDGLCKEGR 446

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
           +  A    N+M ++G + D       I G ++     +A     EM  KG  P +++YN 
Sbjct: 447 MDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNT 506

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           L+ GLCK     EA   +++M+   + PD IT + ++    +   +    +L+   L KG
Sbjct: 507 LIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKG 566

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
             P +  Y +L+H   +  +LE A   +S M+     PN++T N L+ GL ++R  ++A 
Sbjct: 567 FKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKAS 626

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            ++  + ++G+ P+  +Y I I   C+     +A+    + L+R I P   T + L+
Sbjct: 627 EIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNILV 683



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 146/484 (30%), Positives = 238/484 (49%), Gaps = 2/484 (0%)

Query: 193 LLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMGEFGIKPSIVTYNTMLD 251
           L VF++M   G++ DV   N +I     +G   K +E++ R++ +  + P++VTYN M++
Sbjct: 206 LKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMIN 265

Query: 252 SFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKV 311
             CK G   E+LE+   M       +  TY+ LI G    G ++ A  + +++++  L V
Sbjct: 266 GLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVV 325

Query: 312 SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRF 371
            A ++N ++ G+   G + E+  L   M       T+ +YNILI GL + G+V +A   +
Sbjct: 326 DAVTHNAMLNGFCRAGKIKESFELWMVMGKEN-CQTVVSYNILIKGLFENGKVEEAISIW 384

Query: 372 FEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY 431
             + +K   P+  +Y  L++G C++G + +A  +F E            Y++++DGLC+ 
Sbjct: 385 ELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKE 444

Query: 432 GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAY 491
           G ++ A  +   M  +G   D      ++NG  +   L  A  FF EM  KG  P   +Y
Sbjct: 445 GRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSY 504

Query: 492 TTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
            T I G  K    SEAY   +EML K + PD+IT ++L+ GLC+   +E A  L ++ + 
Sbjct: 505 NTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALD 564

Query: 552 DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLEL 611
            GF PD   Y  ++H    +  L     L+++M R    P LVT   L+         E 
Sbjct: 565 KGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEK 624

Query: 612 AFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
           A   +  +   G+ P++I+YN  I GLC   RI  A     D    GILP   T+ IL+ 
Sbjct: 625 ASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNILVR 684

Query: 672 ENCN 675
              N
Sbjct: 685 AAVN 688



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 145/525 (27%), Positives = 258/525 (49%), Gaps = 3/525 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLR-NGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKP 241
           Y K  M  + L  F  M    G  P V++ N ++    +     +A    R      + P
Sbjct: 90  YAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSP 149

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
           ++ TYN ++   CK+ ++++A+ LL  M  +   P+  +Y  LI G  + G+L  A  + 
Sbjct: 150 NLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVF 209

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR-GVAPTLATYNILIYGLCK 360
            +M   G+      YN +I G+ + G   +   + E +V    V P + TYNI+I GLCK
Sbjct: 210 DEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCK 269

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            GR  ++   +  M +     D+ +Y++L++G C +GNI  A  ++ E+   +LV   VT
Sbjct: 270 CGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVT 329

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           +N +++G CR G ++ + +L   M  +     V++Y I++ G  + G +  A   +  + 
Sbjct: 330 HNAMLNGFCRAGKIKESFELWMVMGKENC-QTVVSYNILIKGLFENGKVEEAISIWELLC 388

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           +KG +P+   Y   I G  K G  ++A ++ +E        D   Y+ +V GLCK G ++
Sbjct: 389 KKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMD 448

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA  ++ +M   G+  D      +I+  +    L    + F  M  KG SPT+V+Y  LI
Sbjct: 449 EAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLI 508

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                  R   A+ +  EM  K  +P++IT + L++GLC+ ++I+ A  L+    ++G  
Sbjct: 509 KGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFK 568

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           P+   Y IL++  C+    ++AL+LY  M      P+  T + L+
Sbjct: 569 PDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLM 613



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 145/572 (25%), Positives = 266/572 (46%), Gaps = 63/572 (11%)

Query: 58  YKELIISTVEEKPWAFCNNRWVSDHFQAVVSDPELLV-RVLNRI---REKPRIALRFFRW 113
           Y  L+ + VE   W    +   S +F+++   P L    +L +I   +++   A+    W
Sbjct: 119 YNTLLNAFVELNEWDRAES--FSRYFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDW 176

Query: 114 VETQPGVKRDEFVFCTILEILIESGLL---------RSAYWVVETVVCVNM-------HG 157
           + +Q  +K D F + T++  +++ G L          S   VV  V C NM       HG
Sbjct: 177 MWSQ-NLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHG 235

Query: 158 ILDV------LIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNC 211
             D        +    S   ++   ++++    K    ++ L ++ +M +N    D+   
Sbjct: 236 DYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTY 295

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL------ 265
           + +I  L + G    A  VY+ + E  +    VT+N ML+ FC+ G+++E+ EL      
Sbjct: 296 SSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGK 355

Query: 266 ---------------------------LWEMQ-GRGCSPNGVTYNVLITGFSRNGELEQA 297
                                      +WE+   +GC P   TY VLI G  +NG L +A
Sbjct: 356 ENCQTVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKA 415

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             + ++      K+ A++Y+ ++ G  ++G + EA+++  +M  RG        N LI G
Sbjct: 416 LKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLING 475

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
             +  ++ DA + F EM  K   P I+SYNTL+ G C++    EA+    E+  +   P 
Sbjct: 476 FVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPD 535

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           ++T + L+DGLC+   +E+A  L +  +++G  PD+  Y I+++G C +  L  A + ++
Sbjct: 536 MITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYS 595

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            M R    P+     T + G  K+ D  +A  + + +L  G  PD+I+YN+ + GLC   
Sbjct: 596 HMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCS 655

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
            + +A E L   +  G +P  +T+  ++ A++
Sbjct: 656 RISDAIEFLNDALNRGILPTAVTWNILVRAAV 687


>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
 gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 142/537 (26%), Positives = 264/537 (49%), Gaps = 38/537 (7%)

Query: 188 MVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
           MV + L   +++ ++  LPD   CN+ I  L ++   + + +    +   G  P   ++N
Sbjct: 1   MVREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFN 60

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
           +++   CK G+++ A +++  M   GC P+ ++YN LI G  RNG++  A          
Sbjct: 61  SVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSA---------- 110

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
                               L++E+L      + +   P + ++N L  G  K  ++ D 
Sbjct: 111 -------------------SLVLESLRASHGFICK---PDIVSFNSLFNGFSKM-KMLDE 147

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
              +  ++ K   P++++Y+T +  +C+SG +  A   F  ++   L P VVT+  LIDG
Sbjct: 148 VFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDG 207

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
            C+ GDLEVA  L + M    +  +V+TYT +++G CK G +  A E ++ M+   ++P+
Sbjct: 208 YCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPN 267

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              YTT I G  + GD+  A +   +ML +G   D+  Y V++ GLC  G L+EA E++ 
Sbjct: 268 SLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVE 327

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
            M     +PD + +T++++A  + G ++   ++++ ++ +G  P +V  + +I   A  G
Sbjct: 328 DMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNG 387

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
           +L  A +YF        + N + Y  LI+ LC+     +   LF  + E G++P+K+ YT
Sbjct: 388 QLHEAIVYFCIE-----KANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYT 442

Query: 668 ILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
             I   C  GN  +A +L   M+   +  D   ++ L+     K   V A +  + +
Sbjct: 443 SWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEM 499



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 129/423 (30%), Positives = 216/423 (51%), Gaps = 14/423 (3%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKA--REVYRMMGEF--GIKPSIVTYNTMLDSFCKEGEMQE 261
           PD+ + N +      NGFS      EV+  MG       P++VTY+T +D+FCK GE+Q 
Sbjct: 127 PDIVSFNSLF-----NGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQL 181

Query: 262 ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC 321
           AL+    M+    SPN VT+  LI G+ + G+LE A  L ++M ++ + ++  +Y  +I 
Sbjct: 182 ALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALID 241

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           G+ +KG +  A  +   MV   V P    Y  +I G  + G   +A     +ML + +  
Sbjct: 242 GFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRL 301

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           DI +Y  ++ G C +G + EA  + +++   +LVP +V + T+++   + G ++ A  + 
Sbjct: 302 DITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMY 361

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
             +I +G  PDV+  + M++G  K G L  A  +F   + K    +   YT  I    K 
Sbjct: 362 HKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF--CIEKA---NDVMYTVLIDALCKE 416

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
           GD  E  RL  ++   G  PD   Y   + GLCK G+L +A +L  +MV +G + D + Y
Sbjct: 417 GDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAY 476

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
           T++I+     G +   R +F+ ML  G+SP    + +LI A+   G +  A     +MQ 
Sbjct: 477 TTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQR 536

Query: 622 KGI 624
           +G+
Sbjct: 537 RGL 539



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 186/373 (49%), Gaps = 5/373 (1%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K   ++  L  F+ M R+ L P+V     +I      G    A  +Y+ M    +  +
Sbjct: 173 FCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLN 232

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +VTY  ++D FCK+GEMQ A E+   M      PN + Y  +I GF + G+ + A   + 
Sbjct: 233 VVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLA 292

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            ML  G+++   +Y  II G    G L EA  + E+M    + P +  +  ++    K G
Sbjct: 293 KMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSG 352

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R+  A + + +++ +   PD+++ +T++ G  ++G + EA + F   ++ +     V Y 
Sbjct: 353 RMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKAND-----VMYT 407

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            LID LC+ GD    ++L   +   G++PD   YT  + G CK GNL  A +    M+++
Sbjct: 408 VLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQE 467

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           GL  D  AYTT I G    G   EA ++ +EML  G  PD   +++L+    K G++  A
Sbjct: 468 GLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAA 527

Query: 543 NELLRKMVGDGFI 555
           ++LL  M   G +
Sbjct: 528 SDLLLDMQRRGLV 540



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 130/256 (50%), Gaps = 5/256 (1%)

Query: 198 KMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG 257
           KML  G+  D+     II  L  NG   +A E+   M +  + P +V + TM++++ K G
Sbjct: 293 KMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSG 352

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
            M+ A+ +  ++  RG  P+ V  + +I G ++NG+L +A  ++   ++   K +   Y 
Sbjct: 353 RMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA--IVYFCIE---KANDVMYT 407

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            +I    ++G  +E   L  ++   G+ P    Y   I GLCK G + DA      M+++
Sbjct: 408 VLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQE 467

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
            ++ D+++Y TL+YG    G + EA  +FDE+ +  + P    ++ LI    + G++  A
Sbjct: 468 GLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAA 527

Query: 438 QQLKENMINQGILPDV 453
             L  +M  +G++  V
Sbjct: 528 SDLLLDMQRRGLVTAV 543



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/273 (20%), Positives = 117/273 (42%), Gaps = 45/273 (16%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           A++F   +  Q G++ D   +  I+  L  +G L+ A  +VE +   ++  + D++I   
Sbjct: 287 AMKFLAKMLNQ-GMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDL--VPDMVI--- 340

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG---- 222
                       ++  Y K   ++  + +++K++  G  PDV   + +I  +  NG    
Sbjct: 341 ---------FTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHE 391

Query: 223 ----FSV-KAREV---------------------YRMMGEFGIKPSIVTYNTMLDSFCKE 256
               F + KA +V                     +  + E G+ P    Y + +   CK+
Sbjct: 392 AIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQ 451

Query: 257 GEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSY 316
           G + +A +L   M   G   + + Y  LI G +  G + +AR +  +ML  G+   +  +
Sbjct: 452 GNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVF 511

Query: 317 NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           + +I  Y ++G +  A +L  +M  RG+   ++
Sbjct: 512 DLLIRAYEKEGNMAAASDLLLDMQRRGLVTAVS 544


>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 144/497 (28%), Positives = 249/497 (50%), Gaps = 1/497 (0%)

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR-GCSPNGVTYNVL 284
           +A   +  M +    PS++ +  +L    K      A+ L+ EM    G  P+    NV+
Sbjct: 58  EALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDTFILNVV 117

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           I        +     ++  MLKLGL+ S  ++  +I G   KG +  A+ L + +   G 
Sbjct: 118 INSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGY 177

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
              + TY +LI GLCK G+ S+A     +M  +N  P+++ Y+T++ G C+ G + EA  
Sbjct: 178 RSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALG 237

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
           L  E+  + + P +VTY  LI GLC +G  + A  L + M+  G++PD+ +  I+V+  C
Sbjct: 238 LCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLC 297

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
           K G +  A+     M+  G  PD F Y + I          EA R+ E M+++G  PD++
Sbjct: 298 KEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIV 357

Query: 525 TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM 584
            Y  L+HG CK+ ++ +A  LL +M+  GF PD +T+T++I    ++G     ++LF NM
Sbjct: 358 AYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNM 417

Query: 585 LRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRI 644
            + G  P L T  +++        L  A   F  M+   +  N++ Y+ +++G+C   ++
Sbjct: 418 HKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKL 477

Query: 645 DQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
           + A  LF  +  +G+  N Y YTI+IN     G   +A  L   M +    PD CT++  
Sbjct: 478 NTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVF 537

Query: 705 LLKQLDKDYKVHAVEYL 721
           +   + +     +++YL
Sbjct: 538 VQGLVAEREIARSIKYL 554



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 147/469 (31%), Positives = 238/469 (50%)

Query: 203 GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           G+ PD    N +I  L           V   M + G++PS+VT+  +++  C +G++  A
Sbjct: 106 GIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRA 165

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
           +EL+  ++  G   +  TY VLI G  + G+  +A G +R M +     +   Y+ ++ G
Sbjct: 166 VELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDG 225

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
             + GL+ EAL L  EM  +G+ P L TY  LI GLC +GR  +A     EM++  V+PD
Sbjct: 226 LCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPD 285

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
           + S N L+   C+ G I +A  +   +     VP V TYN+LID  C    ++ A ++ E
Sbjct: 286 LQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFE 345

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            M+++G LPD++ YT +++G CK+ N++ A    +EM++ G  PD   +TT I G  ++G
Sbjct: 346 LMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVG 405

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
               A  L   M   G  P+L T  +++ GLCK   L EA  L   M       + + Y+
Sbjct: 406 RPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYS 465

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
            I+      G L    +LF+ +  KGL   +  YT++I+  A +G L+ A    S M+  
Sbjct: 466 IILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEEN 525

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
           G  P+  TYN  + GL   R I ++      M ++G   +  T  ++IN
Sbjct: 526 GCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVDATTTEMIIN 574



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 145/513 (28%), Positives = 247/513 (48%), Gaps = 1/513 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIK-VLRDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
           +++ L  F+ M +   LP V +   ++  +++   ++     V  M    GIKP     N
Sbjct: 56  IDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDTFILN 115

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
            +++S C    +     +L  M   G  P+ VT+ +LI G    G++ +A  L+  + K 
Sbjct: 116 VVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKT 175

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           G +    +Y  +I G  + G   EA+    +M  R   P +  Y+ ++ GLCK G VS+A
Sbjct: 176 GYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEA 235

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
                EM  K + P++++Y  L+ G C  G   EA  L DE+    ++P + + N L+D 
Sbjct: 236 LGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDV 295

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           LC+ G +  A+ +   MI  G +PDV TY  +++  C    +  A   F  M+ +G  PD
Sbjct: 296 LCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPD 355

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
             AYT+ I G  K+ + ++A  L +EM+  GF PD++T+  L+ G C++G    A EL  
Sbjct: 356 IVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFL 415

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
            M   G +P+  T   I+    +   L     LF+ M +  L   +V Y++++    + G
Sbjct: 416 NMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAG 475

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
           +L  A   FS +  KG++ NV  Y  +ING  +   +D+A  L  +MEE G +P+  TY 
Sbjct: 476 KLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYN 535

Query: 668 ILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
           + +           +++    M D+    D  T
Sbjct: 536 VFVQGLVAEREIARSIKYLTMMRDKGFSVDATT 568



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 133/442 (30%), Positives = 218/442 (49%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V   ML+ GL P V     +I  L   G   +A E+   + + G +  + TY  +++  C
Sbjct: 133 VLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLC 192

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K G+  EA+  L +M+ R  +PN V Y+ ++ G  ++G + +A GL  +M   G+K +  
Sbjct: 193 KMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLV 252

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +Y  +I G    G   EA +L +EM+  GV P L + NIL+  LCK G++  A+     M
Sbjct: 253 TYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFM 312

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           +    +PD+ +YN+L+  YC    + EA  +F+ + SR  +P +V Y +LI G C+  ++
Sbjct: 313 ILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNI 372

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
             A  L + MI  G  PDV+T+T ++ G C++G    A+E F  M + G  P+       
Sbjct: 373 NKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAII 432

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           + G  K    SEA  L   M       +++ Y++++ G+C  G L  A EL   +   G 
Sbjct: 433 LDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGL 492

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
             +   YT +I+   + G L +  DL +NM   G  P   TY V +    A   +  +  
Sbjct: 493 QINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIK 552

Query: 615 YFSEMQVKGIRPNVITYNALIN 636
           Y + M+ KG   +  T   +IN
Sbjct: 553 YLTMMRDKGFSVDATTTEMIIN 574



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 142/495 (28%), Positives = 244/495 (49%), Gaps = 14/495 (2%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           A+   + + +  G+K D F+   ++  L    L+   + V+ T++ + +           
Sbjct: 94  AISLVKEMHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLE---------- 143

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
             S V+  IL   L +   K  V + + + + + + G   DVK    +I  L   G + +
Sbjct: 144 -PSVVTFTILINGLCV---KGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSE 199

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A    R M E    P++V Y+T++D  CK+G + EAL L  EM G+G  PN VTY  LI 
Sbjct: 200 AVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQ 259

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G    G  ++A  L+ +M+K+G+     S N ++    ++G +++A ++   M+  G  P
Sbjct: 260 GLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVP 319

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
            + TYN LI   C   ++ +A   F  M+ +  +PDI++Y +L++G+C+  NI +A  L 
Sbjct: 320 DVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLL 379

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
           DE+      P VVT+ TLI G C+ G    A++L  NM   G +P++ T  I+++G CK 
Sbjct: 380 DEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKS 439

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
             LS A   F+ M +  L  +   Y+  + G    G  + A  L   + AKG   ++  Y
Sbjct: 440 QLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAY 499

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
            ++++G  K G L++A +LL  M  +G +PD  TY   +   +   ++ R       M  
Sbjct: 500 TIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRD 559

Query: 587 KGLSPTLVTYTVLIH 601
           KG S    T  ++I+
Sbjct: 560 KGFSVDATTTEMIIN 574



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 120/238 (50%), Gaps = 4/238 (1%)

Query: 464 CKMGNLSMARE---FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK-GF 519
           CK G L    E   FF+ M +    P    +T  +   +K+   + A  L +EM +  G 
Sbjct: 48  CKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGI 107

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
            PD    NV+++ LC L  +     +L  M+  G  P  +T+T +I+     GD+ R  +
Sbjct: 108 KPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVE 167

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
           L +++ + G    + TY VLI+     G+   A  +  +M+ +   PNV+ Y+ +++GLC
Sbjct: 168 LVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLC 227

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           +   + +A GL ++M  +GI PN  TYT LI   CN G W+EA  L  EM+   + PD
Sbjct: 228 KDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPD 285


>gi|414876286|tpg|DAA53417.1| TPA: hypothetical protein ZEAMMB73_373649 [Zea mays]
          Length = 561

 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 135/417 (32%), Positives = 225/417 (53%), Gaps = 4/417 (0%)

Query: 203 GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           G++ ++  CN  I  L  +G   +A +++R M + G+ P+ VTY  ++ S CK G M++A
Sbjct: 46  GIVANLLACNAWIDRLGKDGRYREAEKLFRGMADRGLDPNEVTYAILIHSLCKRGMMEDA 105

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
           L +   M+ +G       YN LI G+ ++    QARGL+ +M+  GL  S  SY+P+I G
Sbjct: 106 LCMFDRMREKGIRMTVYPYNSLINGYCKHNNFHQARGLLNEMVAKGLTPSPASYSPLIAG 165

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
              KG L  A+ L  EM    V+  + T+  LI G CK G + +A   F +M+  +++P+
Sbjct: 166 LCRKGDLASAMELHREMTRNAVSGNVYTFTALISGFCKDGNMDEATRLFHKMMESSLVPN 225

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
            +++N ++ GYCR GNI +AF L+D++  R L P   TY +LI  +C       A++   
Sbjct: 226 EVTFNVMIEGYCRVGNIRKAFQLYDQMLDRGLTPDNYTYRSLISVVCLTLGAMKAKEFVA 285

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
           ++ N   + +  + T +++G CK G+   A     EML     P+ + Y   +      G
Sbjct: 286 DLENNCAVLNSFSLTALMHGFCKEGS---AEILCKEMLAGHFLPNSYTYNCFLDYLANEG 342

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
           +  +A  L   ML +G   + +T+N L+ G C  G ++ A +L++K    GF PD I+Y+
Sbjct: 343 ELEKAKVLHAAML-EGCLANTVTFNTLIKGFCMAGQIQGAIDLMQKNTESGFFPDCISYS 401

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
           +II+   ++GD  +  +L+N ML KGL P +V YT+LI      G  +     +S+M
Sbjct: 402 TIINELCKVGDTNKAFELWNEMLYKGLKPDIVAYTILIRWCNIHGEFDKGLGIYSDM 458



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 135/440 (30%), Positives = 226/440 (51%), Gaps = 7/440 (1%)

Query: 218 LRDNGFSVKAREVYRMMGE---FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGC 274
           LR    S    + +R+ G+    GI  +++  N  +D   K+G  +EA +L   M  RG 
Sbjct: 23  LRGKRMSGHIHKSFRLTGQNCKLGIVANLLACNAWIDRLGKDGRYREAEKLFRGMADRGL 82

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
            PN VTY +LI    + G +E A  +   M + G++++ + YN +I GY +     +A  
Sbjct: 83  DPNEVTYAILIHSLCKRGMMEDALCMFDRMREKGIRMTVYPYNSLINGYCKHNNFHQARG 142

Query: 335 LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
           L  EMV +G+ P+ A+Y+ LI GLC+ G ++ A     EM R  V  ++ ++  L+ G+C
Sbjct: 143 LLNEMVAKGLTPSPASYSPLIAGLCRKGDLASAMELHREMTRNAVSGNVYTFTALISGFC 202

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
           + GN+ EA  LF ++   +LVP  VT+N +I+G CR G++  A QL + M+++G+ PD  
Sbjct: 203 KDGNMDEATRLFHKMMESSLVPNEVTFNVMIEGYCRVGNIRKAFQLYDQMLDRGLTPDNY 262

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
           TY  +++  C       A+EF  ++       + F+ T  + G  K G    A  L +EM
Sbjct: 263 TYRSLISVVCLTLGAMKAKEFVADLENNCAVLNSFSLTALMHGFCKEGS---AEILCKEM 319

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
           LA  F P+  TYN  +  L   G LE+A  L   M+ +G + + +T+ ++I      G +
Sbjct: 320 LAGHFLPNSYTYNCFLDYLANEGELEKAKVLHAAML-EGCLANTVTFNTLIKGFCMAGQI 378

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
           +   DL       G  P  ++Y+ +I+     G    AF  ++EM  KG++P+++ Y  L
Sbjct: 379 QGAIDLMQKNTESGFFPDCISYSTIINELCKVGDTNKAFELWNEMLYKGLKPDIVAYTIL 438

Query: 635 INGLCRLRRIDQAYGLFIDM 654
           I         D+  G++ DM
Sbjct: 439 IRWCNIHGEFDKGLGIYSDM 458



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 129/422 (30%), Positives = 212/422 (50%), Gaps = 6/422 (1%)

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           + G   +G + ++  L     KLG+  +  + N  I    + G   EA  L   M  RG+
Sbjct: 23  LRGKRMSGHIHKSFRLTGQNCKLGIVANLLACNAWIDRLGKDGRYREAEKLFRGMADRGL 82

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
            P   TY ILI+ LCK G + DA   F  M  K +   +  YN+L+ GYC+  N  +A  
Sbjct: 83  DPNEVTYAILIHSLCKRGMMEDALCMFDRMREKGIRMTVYPYNSLINGYCKHNNFHQARG 142

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
           L +E+ ++ L P+  +Y+ LI GLCR GDL  A +L   M    +  +V T+T +++G C
Sbjct: 143 LLNEMVAKGLTPSPASYSPLIAGLCRKGDLASAMELHREMTRNAVSGNVYTFTALISGFC 202

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
           K GN+  A   F++M+   L P+   +   I G  ++G+  +A++L ++ML +G  PD  
Sbjct: 203 KDGNMDEATRLFHKMMESSLVPNEVTFNVMIEGYCRVGNIRKAFQLYDQMLDRGLTPDNY 262

Query: 525 TYNVLVHGLC-KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
           TY  L+  +C  LG+++ A E +  +  +  + +  + T+++H   + G       L   
Sbjct: 263 TYRSLISVVCLTLGAMK-AKEFVADLENNCAVLNSFSLTALMHGFCKEGS---AEILCKE 318

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           ML     P   TY   +   A  G LE A +  + M ++G   N +T+N LI G C   +
Sbjct: 319 MLAGHFLPNSYTYNCFLDYLANEGELEKAKVLHAAM-LEGCLANTVTFNTLIKGFCMAGQ 377

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSA 703
           I  A  L     E G  P+  +Y+ +INE C  G+  +A  L+ EML + ++PD   ++ 
Sbjct: 378 IQGAIDLMQKNTESGFFPDCISYSTIINELCKVGDTNKAFELWNEMLYKGLKPDIVAYTI 437

Query: 704 LL 705
           L+
Sbjct: 438 LI 439



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 68/157 (43%)

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
           G + +   L     + G+   L+     I      GR   A   F  M  +G+ PN +TY
Sbjct: 30  GHIHKSFRLTGQNCKLGIVANLLACNAWIDRLGKDGRYREAEKLFRGMADRGLDPNEVTY 89

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
             LI+ LC+   ++ A  +F  M E+GI    Y Y  LIN  C   N+ +A  L  EM+ 
Sbjct: 90  AILIHSLCKRGMMEDALCMFDRMREKGIRMTVYPYNSLINGYCKHNNFHQARGLLNEMVA 149

Query: 692 REIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLGA 728
           + + P   ++S L+     K     A+E    +T  A
Sbjct: 150 KGLTPSPASYSPLIAGLCRKGDLASAMELHREMTRNA 186



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 1/144 (0%)

Query: 198 KMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG 257
           +ML    LP+    N  +  L + G   KA+ ++  M E G   + VT+NT++  FC  G
Sbjct: 318 EMLAGHFLPNSYTYNCFLDYLANEGELEKAKVLHAAMLE-GCLANTVTFNTLIKGFCMAG 376

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
           ++Q A++L+ +    G  P+ ++Y+ +I    + G+  +A  L  +ML  GLK    +Y 
Sbjct: 377 QIQGAIDLMQKNTESGFFPDCISYSTIINELCKVGDTNKAFELWNEMLYKGLKPDIVAYT 436

Query: 318 PIICGYSEKGLLVEALNLEEEMVT 341
            +I   +  G   + L +  +MVT
Sbjct: 437 ILIRWCNIHGEFDKGLGIYSDMVT 460


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 150/506 (29%), Positives = 246/506 (48%), Gaps = 16/506 (3%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
           F+ M+R+   P + + N ++  L       +   +Y  M   G+     T N +L+  C 
Sbjct: 57  FHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCN 116

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
              ++E       +  RG SPN VTYN LI G      + +A  L   M KLG      +
Sbjct: 117 VNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVT 176

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTR------GVAPTLATYNILIYGLCKWGRVSDARH 369
           Y  +I G    G +  AL L +EM+           P + TYNI++ GLCK GR  +A+ 
Sbjct: 177 YGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQ 236

Query: 370 RFFEMLRKNVIP----------DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
            F EM  + +IP          D++++N L+   C+ G + EA  L   +    +VP +V
Sbjct: 237 LFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLV 296

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
           TYN+LI+G C  GDL  A++L  +M ++G  PDVI+Y +++NG  K   +  A + +NEM
Sbjct: 297 TYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEM 356

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
           L  G +P+   Y + + G    G   +A +L   M A G   +  TY + + GLCK   L
Sbjct: 357 LLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCL 416

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
            EA +L  ++    F  +      +I    + G L    +LF  +  +G  P +VTYT++
Sbjct: 417 FEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIM 476

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           IH     G+++ A +   +M+  G  P++ITYN L+ G     ++++   L   M ++ +
Sbjct: 477 IHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDV 536

Query: 660 LPNKYTYTILINENCNAGNWQEALRL 685
            P+  T +I+++       +QE L L
Sbjct: 537 SPDAITCSIVVDMLSKDEKYQECLHL 562



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 152/517 (29%), Positives = 244/517 (47%), Gaps = 17/517 (3%)

Query: 221 NGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVT 280
           N  +  A   + +M      PS+ ++N +L    K     +   L  +M+  G S +  T
Sbjct: 47  NVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCT 106

Query: 281 YNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV 340
            N+L+        L +       +L+ G   +  +YN +I G   +  + EA  L   M 
Sbjct: 107 LNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQ 166

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK------NVIPDIISYNTLLYGYC 394
             G  P + TY  LI GLC  G ++ A     EML        N  P++I+YN ++ G C
Sbjct: 167 KLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLC 226

Query: 395 RSGNIGEAFLLFDELRSRNLVPT----------VVTYNTLIDGLCRYGDLEVAQQLKENM 444
           + G   EA  LF+E++++ ++P           +VT+N LID LC+ G +  A++L   M
Sbjct: 227 KVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVM 286

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
           I  GI+PD++TY  ++ G C +G+L+ ARE F  M  KG +PD  +Y   I G  K    
Sbjct: 287 IESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKV 346

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
            EA +L  EML  G  P++ITY+ L+ G+   G +++A +L   M   G   +  TY   
Sbjct: 347 EEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIF 406

Query: 565 IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
           +    +   L     LF  +        +     LI      G+LE A+  F ++  +G 
Sbjct: 407 LDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGH 466

Query: 625 RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
            PNV+TY  +I+G CR  ++D+A  L   ME  G  P+  TY  L+     +   +E ++
Sbjct: 467 EPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQ 526

Query: 685 LYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYL 721
           L   M  +++ PD  T S +++  L KD K     +L
Sbjct: 527 LLHRMAQKDVSPDAITCS-IVVDMLSKDEKYQECLHL 562



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 133/441 (30%), Positives = 224/441 (50%), Gaps = 16/441 (3%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
           L++LL      + + +    F  +LR G  P++   N +IK L       +A  ++  M 
Sbjct: 107 LNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQ 166

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR------GCSPNGVTYNVLITGFS 289
           + G  P +VTY T++   C  G +  AL+L  EM          C PN +TYN+++ G  
Sbjct: 167 KLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLC 226

Query: 290 RNGELEQARGLIR----------DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
           + G  ++A+ L            +ML  GL+    ++N +I    ++G ++EA  L   M
Sbjct: 227 KVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVM 286

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
           +  G+ P L TYN LI G C  G ++ AR  F  M  K   PD+ISYN L+ GY ++  +
Sbjct: 287 IESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKV 346

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
            EA  L++E+      P V+TY++L+ G+   G ++ A++L   M   GI  +  TY I 
Sbjct: 347 EEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIF 406

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           ++G CK   L  A + F E+     + +       I G  K G    A+ L E++  +G 
Sbjct: 407 LDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGH 466

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
            P+++TY +++HG C+ G +++AN L++KM  +G  PD ITY +++    E   L     
Sbjct: 467 EPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQ 526

Query: 580 LFNNMLRKGLSPTLVTYTVLI 600
           L + M +K +SP  +T ++++
Sbjct: 527 LLHRMAQKDVSPDAITCSIVV 547



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 125/367 (34%), Positives = 186/367 (50%), Gaps = 10/367 (2%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMG----------EFGIKPSIVTYNTMLDSFCK 255
           P+V   N I+  L   G   +A++++  M           + G++P +VT+N ++D+ CK
Sbjct: 213 PNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCK 272

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
           EG++ EA +LL  M   G  P+ VTYN LI GF   G+L  AR L   M   G +    S
Sbjct: 273 EGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVIS 332

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           YN +I GYS+   + EA+ L  EM+  G  P + TY+ L+ G+   G+V DA+  F  M 
Sbjct: 333 YNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMK 392

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
              +  +  +Y   L G C++  + EA  LF EL+S N    +   N LIDGLC+ G LE
Sbjct: 393 AHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLE 452

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            A +L E + N+G  P+V+TYTIM++G C+ G +  A     +M   G  PD   Y T +
Sbjct: 453 TAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLM 512

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
            G  +     E  +L   M  K   PD IT +++V  L K    +E   LL +      +
Sbjct: 513 RGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQKGV 572

Query: 556 PDHITYT 562
             H+  T
Sbjct: 573 DKHLLMT 579



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/303 (29%), Positives = 155/303 (51%), Gaps = 35/303 (11%)

Query: 194 LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
           ++ N+ML  GL PD+   N +I  L   G  ++A+++  +M E GI P +VTYN++++ F
Sbjct: 246 MIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGF 305

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           C  G++  A EL   M  +GC P+ ++YNVLI G+S+  ++E+A  L  +ML +G + + 
Sbjct: 306 CMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNV 365

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY---------------------- 351
            +Y+ ++ G    G + +A  L   M   G+A    TY                      
Sbjct: 366 ITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTE 425

Query: 352 -------------NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
                        N LI GLCK G++  A   F ++  +   P++++Y  +++G+CR G 
Sbjct: 426 LKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQ 485

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           + +A +L  ++ +    P ++TYNTL+ G      LE   QL   M  + + PD IT +I
Sbjct: 486 VDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSI 545

Query: 459 MVN 461
           +V+
Sbjct: 546 VVD 548



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 100/222 (45%), Gaps = 35/222 (15%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y+K   VE+ + ++N+ML  G  P+V   + ++K +   G    A++++ +M   GI  +
Sbjct: 340 YSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAEN 399

Query: 243 IVTY-----------------------------------NTMLDSFCKEGEMQEALELLW 267
             TY                                   N ++D  CK G+++ A EL  
Sbjct: 400 SYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFE 459

Query: 268 EMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKG 327
           ++   G  PN VTY ++I GF R G++++A  LI+ M   G      +YN ++ G+ E  
Sbjct: 460 KLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESN 519

Query: 328 LLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
            L E + L   M  + V+P   T +I++  L K  +  +  H
Sbjct: 520 KLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLH 561



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 65/131 (49%)

Query: 171 VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV 230
           + I+ L+ L+    K   +E    +F K+   G  P+V     +I      G   KA  +
Sbjct: 433 LEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVL 492

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
            + M   G  P I+TYNT++  F +  +++E ++LL  M  +  SP+ +T ++++   S+
Sbjct: 493 IQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSK 552

Query: 291 NGELEQARGLI 301
           + + ++   L+
Sbjct: 553 DEKYQECLHLL 563


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 151/481 (31%), Positives = 244/481 (50%), Gaps = 24/481 (4%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRD-----NGFSVKAREVYRMMGEFGIKPSIV 244
            Q   ++N+M  +G+ PD    N ++  L +      G +V A  + R     G  P IV
Sbjct: 113 SQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRR-----GYIPDIV 167

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY T++   C E  + +A  L   MQ  GC+PN +TY  L+ G  R G +  A  L ++M
Sbjct: 168 TYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEM 227

Query: 305 LK------LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
           L       +  K    SY+ II    +     EA +L EEM  +G+ PT+ +Y  L++  
Sbjct: 228 LNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMW-- 285

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
                  +A+  F EM+ + V P+++++N L+   C+ G + EA  L + +  R +VP +
Sbjct: 286 ------EEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNL 339

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           +TYN+LI+G C  GDL  A++L  +M ++G  PDVI YT+++NG CK   +  A + +N 
Sbjct: 340 LTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNG 399

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           ML+ G +PD   Y   + G  + G   +A +L   M   G P DL  Y + ++GLCK G 
Sbjct: 400 MLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGC 459

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           L EA EL  K+       D   +  +I    + G L    +LF  + ++ L P +VTY +
Sbjct: 460 LFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNI 519

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           +IH     G++  A + F +M+  G  P+ ITY  LI G    +++++   L   M +  
Sbjct: 520 MIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRD 579

Query: 659 I 659
           +
Sbjct: 580 V 580



 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 158/513 (30%), Positives = 252/513 (49%), Gaps = 14/513 (2%)

Query: 191 QCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTML 250
           Q    F+ M+ +   P + +   ++  L       +   +Y  M   GI P   T N +L
Sbjct: 79  QAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILL 138

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
           +  C    + E L ++  +  RG  P+ VTY  LI G      + +A  L   M KLG  
Sbjct: 139 NCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCT 198

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG------VAPTLATYNILIYGLCKWGRV 364
            +A +Y  ++ G    G +  AL L +EM+           P + +Y+I+I  LCK  R 
Sbjct: 199 PNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRRE 258

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            +AR  F EM  + + P +ISY +L++         EA  LF+E+ ++ + P VVT+N L
Sbjct: 259 DEARDLFEEMKVQGMTPTVISYTSLMWE--------EAKRLFNEMVNQGVQPNVVTFNVL 310

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           ID LC+ G +  A+ L E MI +GI+P+++TY  ++ G C +G+L+ ARE F  M  KG 
Sbjct: 311 IDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGC 370

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
           +PD   YT  I G  K     EA +L   ML  G  PD+ TY  L+ GL + G + +A +
Sbjct: 371 EPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKK 430

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           L   M   G   D   Y   ++   + G L    +LFN +    +   +  +  LI    
Sbjct: 431 LFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLC 490

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
             G+LE A+  F ++  + ++P+V+TYN +I+  CR  ++ +A  LF  ME+ G  P+K 
Sbjct: 491 KAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKI 550

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           TY  LI     +   ++ + L   M+ R++  D
Sbjct: 551 TYATLIRGFFESKKLEKVVELLHMMVQRDVSLD 583



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/488 (27%), Positives = 244/488 (50%), Gaps = 14/488 (2%)

Query: 224 SVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNV 283
           +++A + + +M      P + ++  +L    K     +   L  +M+  G SP+  T N+
Sbjct: 77  AIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNI 136

Query: 284 LITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG 343
           L+        + +   ++  +L+ G      +Y  +I G   +  + +A  L   M   G
Sbjct: 137 LLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLG 196

Query: 344 VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK------NVIPDIISYNTLLYGYCRSG 397
             P   TY  L+ GLC+ G +S A     EML        N  P +ISY+ ++   C+  
Sbjct: 197 CTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDR 256

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
              EA  LF+E++ + + PTV++Y +L+         E A++L   M+NQG+ P+V+T+ 
Sbjct: 257 REDEARDLFEEMKVQGMTPTVISYTSLM--------WEEAKRLFNEMVNQGVQPNVVTFN 308

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
           ++++  CK G +  A++    M+++G+ P+   Y + I G   +GD + A  L   M +K
Sbjct: 309 VLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSK 368

Query: 518 GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
           G  PD+I Y VL++G CK   +EEA +L   M+  G  PD  TY +++    + G +   
Sbjct: 369 GCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDA 428

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
           + LF  M   G+   L  Y + ++     G L  A   F++++   I+ ++  +N LI+G
Sbjct: 429 KKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDG 488

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           LC+  +++ A+ LF  + +E + P+  TY I+I+E C  G   +A  L+++M      PD
Sbjct: 489 LCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPD 548

Query: 698 YCTHSALL 705
             T++ L+
Sbjct: 549 KITYATLI 556



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 134/441 (30%), Positives = 220/441 (49%), Gaps = 14/441 (3%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
           L++LL      + V + L V   +LR G +PD+     +IK L       KA  ++  M 
Sbjct: 134 LNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQ 193

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM------QGRGCSPNGVTYNVLITGFS 289
           + G  P+ +TY T++   C+ G +  AL+L  EM       G    P  ++Y+++I    
Sbjct: 194 KLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALC 253

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           ++   ++AR L  +M   G+  +  SY  +        +  EA  L  EMV +GV P + 
Sbjct: 254 KDRREDEARDLFEEMKVQGMTPTVISYTSL--------MWEEAKRLFNEMVNQGVQPNVV 305

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           T+N+LI  LCK G+V +A+     M+++ ++P++++YN+L+ G+C  G++  A  LF  +
Sbjct: 306 TFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSM 365

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
            S+   P V+ Y  LI+G C+   +E A +L   M+  G  PDV TY  ++ G  + G +
Sbjct: 366 PSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKV 425

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A++ F  M   G+  D + Y   + G  K G   EA  L  ++ +     D+  +N L
Sbjct: 426 GDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCL 485

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           + GLCK G LE A EL  K+  +   PD +TY  +IH     G + +   LF  M + G 
Sbjct: 486 IDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGC 545

Query: 590 SPTLVTYTVLIHAHAARGRLE 610
           +P  +TY  LI       +LE
Sbjct: 546 TPDKITYATLIRGFFESKKLE 566



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 127/408 (31%), Positives = 217/408 (53%), Gaps = 14/408 (3%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVL-RDNGFSVKAREVYRMMGE---FGI--KPS 242
           + +  L+F +M + G  P+      ++K L R    S+  +    M+ +   +GI  KP 
Sbjct: 182 ISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPV 241

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +++Y+ ++D+ CK+    EA +L  EM+ +G +P  ++Y  L+         E+A+ L  
Sbjct: 242 VISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLM--------WEEAKRLFN 293

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M+  G++ +  ++N +I    ++G ++EA +L E M+ RG+ P L TYN LI G C  G
Sbjct: 294 EMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVG 353

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            ++ AR  F  M  K   PD+I Y  L+ GYC++  + EA  L++ +      P V TY 
Sbjct: 354 DLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYG 413

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            L+ GL + G +  A++L   M   GI  D+  Y I +NG CK G L  A E FN++   
Sbjct: 414 ALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSY 473

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
            ++ D   +   I G  K G    A+ L E++  +   PD++TYN+++H  C+ G + +A
Sbjct: 474 NIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKA 533

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
           N L +KM  +G  PD ITY ++I    E   L +  +L + M+++ +S
Sbjct: 534 NILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVS 581



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 107/306 (34%), Positives = 164/306 (53%), Gaps = 3/306 (0%)

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           +A+ ++  M   G++P++VT+N ++D  CKEG++ EA +LL  M  RG  PN +TYN LI
Sbjct: 287 EAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLI 346

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            GF   G+L  AR L   M   G +     Y  +I GY +   + EA+ L   M+  G  
Sbjct: 347 EGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKR 406

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P + TY  L+ GL + G+V DA+  F  M    +  D+  Y   L G C++G + EA  L
Sbjct: 407 PDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMEL 466

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
           F++L+S N+   +  +N LIDGLC+ G LE A +L E +  + + PDV+TY IM++  C+
Sbjct: 467 FNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCR 526

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
            G +  A   F +M + G  PD+  Y T I G  +     +   L   M+ +    D+  
Sbjct: 527 GGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDV-- 584

Query: 526 YNVLVH 531
            N+L H
Sbjct: 585 -NILRH 589



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 162/300 (54%)

Query: 188 MVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
           M E+   +FN+M+  G+ P+V   N +I VL   G  ++A+++  +M + GI P+++TYN
Sbjct: 284 MWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYN 343

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
           ++++ FC  G++  A EL   M  +GC P+ + Y VLI G+ +  ++E+A  L   ML++
Sbjct: 344 SLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQV 403

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           G +    +Y  ++ G  + G + +A  L   M   G+   L  Y I + GLCK G + +A
Sbjct: 404 GKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEA 463

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
              F ++   N+  DI  +N L+ G C++G +  A+ LF++L    L P VVTYN +I  
Sbjct: 464 MELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHE 523

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
            CR G +  A  L + M   G  PD ITY  ++ G  +   L    E  + M+++ +  D
Sbjct: 524 FCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLD 583



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 134/251 (53%), Gaps = 16/251 (6%)

Query: 463 SCKMGNLS--MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
           +CK GN++   A +FF+ M+     P   ++T  ++G  K+   S+ + L  +M   G  
Sbjct: 69  NCKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGIS 128

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           PD  T N+L++ LC +  + E   ++  ++  G+IPD +TYT++I        + +   L
Sbjct: 129 PDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALL 188

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM----QVKGI--RPNVITYNAL 634
           F  M + G +P  +TY  L+      G + +A     EM     + GI  +P VI+Y+ +
Sbjct: 189 FTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSII 248

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           I+ LC+ RR D+A  LF +M+ +G+ P   +YT L+        W+EA RL+ EM+++ +
Sbjct: 249 IDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLM--------WEEAKRLFNEMVNQGV 300

Query: 695 EPDYCTHSALL 705
           +P+  T + L+
Sbjct: 301 QPNVVTFNVLI 311



 Score = 41.6 bits (96), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 68/157 (43%), Gaps = 14/157 (8%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G+  D +++   L  L ++G L  A  +   +   N+               + I+  + 
Sbjct: 439 GIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIK--------------LDIECFNC 484

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+    K   +E    +F K+ +  L PDV   N +I      G  VKA  +++ M + G
Sbjct: 485 LIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNG 544

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCS 275
             P  +TY T++  F +  ++++ +ELL  M  R  S
Sbjct: 545 CTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVS 581


>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
 gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
          Length = 643

 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 153/551 (27%), Positives = 269/551 (48%), Gaps = 5/551 (0%)

Query: 177 DLLLLIYTKKSMV-EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
           +++L +Y K  M   +   +F  M   G+LPD    N +I   R      +A  V++ M 
Sbjct: 72  NVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHEEAAAVFKDMK 131

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
             G  P  VTYN +LD + K    +EA+E+L EM+  GCSP+ VTYN LI+ ++R+G L+
Sbjct: 132 SMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLK 191

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
           +A  L   M++ G+ +   +Y  ++ G+   G    A+ +  EM   G  P + T+N LI
Sbjct: 192 EAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALI 251

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
                 G+ ++    F E+     +PDI+++NTLL  + ++G   E   +F E++    V
Sbjct: 252 KMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV 311

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P   TYNTLI    R G  + A  + + M+  GI PD+ TY  ++    + G    + + 
Sbjct: 312 PERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKI 371

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD--LITYNVLVHGL 533
           F EM     +P+   Y + +       +      L EE+ +    P   L+   VLV+  
Sbjct: 372 FAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSK 431

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
           C L  L EA     ++   GF PD  T  +++          +  ++ N M   G +P+L
Sbjct: 432 CDL--LVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSL 489

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
            TY  L++ H+     E +     E+  KGI+P+ I+YN +I   CR  R+ +A  +F +
Sbjct: 490 ATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSE 549

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDY 713
           M E G++P+  TY   +        +++A+ + + M+    +P+  T+++++      ++
Sbjct: 550 MRESGLVPDVITYNTFVASYAADSMFEDAIDVVRYMIKHGCKPNQNTYNSVVDGYCKHNH 609

Query: 714 KVHAVEYLESL 724
           +  A+ ++ SL
Sbjct: 610 RDDAIMFISSL 620



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 129/443 (29%), Positives = 213/443 (48%), Gaps = 4/443 (0%)

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
           V+I+   + G++  A  L+ D+ K G  +  ++Y  +I      G   EA+ + ++M   
Sbjct: 3   VIISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEE 62

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFE-MLRKNVIPDIISYNTLLYGYCRSGNIG- 400
           G  PTL TYN+++    K G   +     FE M    V+PD  +YNTL+   CR G++  
Sbjct: 63  GCKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLI-TCCRRGSLHE 121

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           EA  +F +++S   VP  VTYN L+D   +    + A ++   M   G  P ++TY  ++
Sbjct: 122 EAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLI 181

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
           +   + G L  A E  N+M+  G+  D F YTT ++G ++ G    A R+  EM A G  
Sbjct: 182 SAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCK 241

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           P++ T+N L+      G   E  ++  ++     +PD +T+ +++    + G       +
Sbjct: 242 PNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGV 301

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
           F  M R G  P   TY  LI A++  G  + A   +  M   GI P++ TYNA++  L R
Sbjct: 302 FKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALAR 361

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
               +Q+  +F +M++    PN+ TY  L++   N       L L +E+    IEP    
Sbjct: 362 GGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVL 421

Query: 701 HSALLLKQLDKDYKVHA-VEYLE 722
              L+L     D  V A V +LE
Sbjct: 422 LKTLVLVNSKCDLLVEAEVAFLE 444



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/452 (24%), Positives = 209/452 (46%), Gaps = 6/452 (1%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           SI   + L+  Y +  ++++ + + N+M+  G+  DV     ++      G    A  V+
Sbjct: 173 SIVTYNSLISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVF 232

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M   G KP+I T+N ++      G+  E +++  E++   C P+ VT+N L+  F +N
Sbjct: 233 AEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQN 292

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G   +  G+ ++M + G      +YN +I  YS  G   +A+++ + M+  G+ P L+TY
Sbjct: 293 GMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTY 352

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           N ++  L + G    +   F EM      P+ ++Y +LL+ Y     IG    L +E+ S
Sbjct: 353 NAVLAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICS 412

Query: 412 RNLVPTVVTYNT--LIDGLCRYGDLEVAQQLK-ENMINQGILPDVITYTIMVNGSCKMGN 468
             + P  V   T  L++  C   DL V  ++    +  +G  PD+ T   M++   +   
Sbjct: 413 GVIEPHAVLLKTLVLVNSKC---DLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQM 469

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
            +   E  N M   G  P    Y + +    +  +   +  + +E+LAKG  PD I+YN 
Sbjct: 470 FTKTNEILNFMNESGFTPSLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNT 529

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           ++   C+ G ++EA+ +  +M   G +PD ITY + + +           D+   M++ G
Sbjct: 530 VIFAYCRNGRMKEASRIFSEMRESGLVPDVITYNTFVASYAADSMFEDAIDVVRYMIKHG 589

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
             P   TY  ++  +      + A M+ S + 
Sbjct: 590 CKPNQNTYNSVVDGYCKHNHRDDAIMFISSLH 621



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 99/426 (23%), Positives = 188/426 (44%), Gaps = 14/426 (3%)

Query: 117 QPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKIL 176
           + G+  D F + T+L   + +G   SA  V   +                     +I   
Sbjct: 202 EGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKP--------------NICTF 247

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           + L+ ++  +    + + VF ++  +  +PD+   N ++ V   NG   +   V++ M  
Sbjct: 248 NALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR 307

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G  P   TYNT++ ++ + G   +A+++   M   G +P+  TYN ++   +R G  EQ
Sbjct: 308 AGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQ 367

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           +  +  +M     K +  +Y  ++  Y+    +   L L EE+ +  + P       L+ 
Sbjct: 368 SEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVL 427

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
              K   + +A   F E+ RK   PD+ + N +L  Y R     +   + + +      P
Sbjct: 428 VNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTP 487

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
           ++ TYN+L+    R  + E ++++ + ++ +GI PD I+Y  ++   C+ G +  A   F
Sbjct: 488 SLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIF 547

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           +EM   GL PD   Y T +A         +A  +   M+  G  P+  TYN +V G CK 
Sbjct: 548 SEMRESGLVPDVITYNTFVASYAADSMFEDAIDVVRYMIKHGCKPNQNTYNSVVDGYCKH 607

Query: 537 GSLEEA 542
              ++A
Sbjct: 608 NHRDDA 613



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 73/141 (51%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           S+   + L+ ++++    E+   V  ++L  G+ PD  + N +I     NG   +A  ++
Sbjct: 488 SLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIF 547

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M E G+ P ++TYNT + S+  +   ++A++++  M   GC PN  TYN ++ G+ ++
Sbjct: 548 SEMRESGLVPDVITYNTFVASYAADSMFEDAIDVVRYMIKHGCKPNQNTYNSVVDGYCKH 607

Query: 292 GELEQARGLIRDMLKLGLKVS 312
              + A   I  + +L   +S
Sbjct: 608 NHRDDAIMFISSLHELDPHIS 628


>gi|449474629|ref|XP_004154237.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g11710, mitochondrial-like [Cucumis sativus]
          Length = 644

 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 184/663 (27%), Positives = 309/663 (46%), Gaps = 58/663 (8%)

Query: 49  VLNPESESYYKELIISTVEEKPWAFCNNRWVSDHFQAVVSDPELLVRVLNRIREKPRIAL 108
           +L+P +E    + I   ++++ W F       +     +++  L+ RV+   R  P++AL
Sbjct: 24  LLSPSTEDIICKAICVNLKQRRWKFL------EQLSPSLTN-SLVCRVIREFRNSPQLAL 76

Query: 109 RFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLS 168
            F+ WVE +          CT++ +L+ S     A  ++E+++  N    L+VL  GGL 
Sbjct: 77  EFYNWVEARDNFSHSLESRCTLVHVLVNSRNFNDALSIMESLILXNGKSPLEVL--GGLM 134

Query: 169 SCVSI-----KILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGF 223
           +   I      +   L+   T+   VE    V  K+   G    +   N  + +L   G 
Sbjct: 135 NSYEICNSNPAVFXALVRTCTQLRSVEGAYDVIRKLRLEGFWVTIHAWNNFLNLLLKLGE 194

Query: 224 SVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNV 283
           + K   +Y+ M   G   ++ T+N ++ + C E ++ EA+ +++ M      PN V +N+
Sbjct: 195 TDKFXNMYKEMIASGYSENVNTFNLIIYALCNECKLLEAIYVVYLMLKIEIWPNVVXFNM 254

Query: 284 LITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG 343
           +I   ++ GE++ A  L R++              +I G S                   
Sbjct: 255 IIDKANKMGEMDLALKLTRNI-------------EVISGGS------------------- 282

Query: 344 VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF 403
           V+P +  YN +I G CK  R+  A++   EM++  +  +  +Y TL+ GY R G++  AF
Sbjct: 283 VSPNIVAYNCIINGFCKIRRLESAKNVLGEMIKLGIDFNERTYATLIDGYARKGSLDVAF 342

Query: 404 LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
            L DE+    L+P    YN+LI  L   G+LE A  L  +MIN+ ILPD  TY+I+  G 
Sbjct: 343 RLCDEMVEMRLIPDTFVYNSLIYWLYMEGELEEASFLLSDMINRRILPDEFTYSILTKGL 402

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
           C  G+L+ A      ++ + L  D F Y   I    +  + + A +L   M+  G  PD+
Sbjct: 403 CVSGHLNKALRVHYYIVERSLVRDAFTYNILINYMFQSRNIAGAKQLLSSMIVGGIKPDM 462

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
           +TY   V G CK G +E A ++  K V          Y SI+    + G +   + L + 
Sbjct: 463 VTYGTPVDGHCKEGKIEAAVQIYDKAV---------VYNSILDGLCKQGSIYAAKLLVDK 513

Query: 584 MLRKG-LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
           + + G L P  VTY  L+H     G +E AF  F EM   G   N+++YN +IN LC++ 
Sbjct: 514 LQQNGFLDP--VTYNTLLHGFCVNGEIEKAFALFLEMINVGSLVNIVSYNIMINFLCKMG 571

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
            I QA  L   M  +GI+P+  TYT LI         ++ + L+  M+ +   PD  T+ 
Sbjct: 572 LIQQAMELMRAMSSQGIIPDLITYTTLITNFVETCGSEDVIELHGYMMLKGAVPDRKTYR 631

Query: 703 ALL 705
           + +
Sbjct: 632 SFV 634



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 159/314 (50%), Gaps = 10/314 (3%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y +K  ++    + ++M+   L+PD    N +I  L   G   +A  +   M    I P 
Sbjct: 332 YARKGSLDVAFRLCDEMVEMRLIPDTFVYNSLIYWLYMEGELEEASFLLSDMINRRILPD 391

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             TY+ +    C  G + +AL + + +  R    +  TYN+LI    ++  +  A+ L+ 
Sbjct: 392 EFTYSILTKGLCVSGHLNKALRVHYYIVERSLVRDAFTYNILINYMFQSRNIAGAKQLLS 451

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M+  G+K    +Y   + G+ ++G +  A+ + ++ V          YN ++ GLCK G
Sbjct: 452 SMIVGGIKPDMVTYGTPVDGHCKEGKIEAAVQIYDKAVV---------YNSILDGLCKQG 502

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            +  A+    + L++N   D ++YNTLL+G+C +G I +AF LF E+ +   +  +V+YN
Sbjct: 503 SIYAAK-LLVDKLQQNGFLDPVTYNTLLHGFCVNGEIEKAFALFLEMINVGSLVNIVSYN 561

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            +I+ LC+ G ++ A +L   M +QGI+PD+ITYT ++    +        E    M+ K
Sbjct: 562 IMINFLCKMGLIQQAMELMRAMSSQGIIPDLITYTTLITNFVETCGSEDVIELHGYMMLK 621

Query: 483 GLQPDRFAYTTQIA 496
           G  PDR  Y + ++
Sbjct: 622 GAVPDRKTYRSFVS 635



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 122/265 (46%), Gaps = 38/265 (14%)

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC--------------------------- 534
           G+T +   + +EM+A G+  ++ T+N++++ LC                           
Sbjct: 193 GETDKFXNMYKEMIASGYSENVNTFNLIIYALCNECKLLEAIYVVYLMLKIEIWPNVVXF 252

Query: 535 --------KLGSLEEANELLRKM---VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
                   K+G ++ A +L R +    G    P+ + Y  II+   ++  L   +++   
Sbjct: 253 NMIIDKANKMGEMDLALKLTRNIEVISGGSVSPNIVAYNCIINGFCKIRRLESAKNVLGE 312

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           M++ G+     TY  LI  +A +G L++AF    EM    + P+   YN+LI  L     
Sbjct: 313 MIKLGIDFNERTYATLIDGYARKGSLDVAFRLCDEMVEMRLIPDTFVYNSLIYWLYMEGE 372

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSA 703
           +++A  L  DM    ILP+++TY+IL    C +G+  +ALR++  +++R +  D  T++ 
Sbjct: 373 LEEASFLLSDMINRRILPDEFTYSILTKGLCVSGHLNKALRVHYYIVERSLVRDAFTYNI 432

Query: 704 LLLKQLDKDYKVHAVEYLESLTLGA 728
           L+           A + L S+ +G 
Sbjct: 433 LINYMFQSRNIAGAKQLLSSMIVGG 457


>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 525

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 156/487 (32%), Positives = 247/487 (50%), Gaps = 2/487 (0%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGC-SPNGVTYNVLI 285
           A   +  M      PSIV+ N +L S  K       + L   +  +G   P+ VT ++ I
Sbjct: 39  AVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSIFI 98

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
              +  G++  A  ++  ++K G  V   +   ++ G   KG   EALNL +  V++G +
Sbjct: 99  NSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFS 158

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
                Y  LI GLCK G+  DA     +M +  V P++I YN ++ G C+ G + EA  L
Sbjct: 159 FDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGL 218

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI-NQGILPDVITYTIMVNGSC 464
             E+  + +   V TYN+LI G C  G  + A +L   M+  + + PDV T+ I+V+  C
Sbjct: 219 CSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALC 278

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
           K+G ++ AR  F  M+++GL+PD  +    + G    G  SEA  + + M+ +G  P++I
Sbjct: 279 KLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVI 338

Query: 525 TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM 584
           +Y+ L++G CK+  ++EA  LL +M     +PD +TY  ++    + G +    DL   M
Sbjct: 339 SYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAM 398

Query: 585 LRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRI 644
              G +P L+TY VL+  +  R  L+ A   F  +   GI PN+ TYN LI+GLC+  R+
Sbjct: 399 RASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRM 458

Query: 645 DQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
             A  +F  +  +G  PN  TY I+IN     G   EA  L  EM+D    P+  T   L
Sbjct: 459 KAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPL 518

Query: 705 LLKQLDK 711
           +   L+K
Sbjct: 519 VRALLEK 525



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 152/488 (31%), Positives = 252/488 (51%), Gaps = 2/488 (0%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK-VLRDNGFSVKAREVYRMMGEFGIKPSI 243
           K    +  +  F++ML     P + + N+++  +++   +         +  +   KPS+
Sbjct: 32  KTPTFDDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSL 91

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           VT +  ++S    G+M  A  ++ ++  RG   +  T   L+ G    G   +A  L   
Sbjct: 92  VTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDH 151

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
            +  G       Y  +I G  + G   +A+ L  +M   GV P L  YN+++ GLCK G 
Sbjct: 152 AVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGL 211

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV-PTVVTYN 422
           V++A     EM+ K +  D+ +YN+L++G+C +G    A  L +E+  +  V P V T+N
Sbjct: 212 VTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFN 271

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            L+D LC+ G +  A+ +   MI +G+ PDV++   ++NG C  G +S A+E F+ M+ +
Sbjct: 272 ILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVER 331

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G  P+  +Y+T I G  K+    EA RL  EM  +   PD +TYN L+ GL K G +   
Sbjct: 332 GKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYE 391

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            +L+  M   G  PD ITY  ++   L+   L +   LF +++  G+SP + TY +LI  
Sbjct: 392 WDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDG 451

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
               GR++ A   F  + VKG RPN+ TYN +INGL R   +D+A  L ++M ++G  PN
Sbjct: 452 LCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPN 511

Query: 663 KYTYTILI 670
             T+  L+
Sbjct: 512 AVTFDPLV 519



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 126/409 (30%), Positives = 214/409 (52%), Gaps = 1/409 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V  K+++ G   D      ++K L   G + +A  +Y      G     V Y T+++  C
Sbjct: 113 VMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLC 172

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K G+ ++A+ELL +M+  G  PN + YN+++ G  + G + +A GL  +M+  G+ +   
Sbjct: 173 KMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVF 232

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTR-GVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
           +YN +I G+   G    A+ L  EMV +  V P + T+NIL+  LCK G V++AR+ F  
Sbjct: 233 TYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGL 292

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M+++ + PD++S N L+ G+C  G + EA  +FD +  R  +P V++Y+TLI+G C+   
Sbjct: 293 MIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKM 352

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           ++ A +L   M  + ++PD +TY  +++G  K G +    +    M   G  PD   Y  
Sbjct: 353 VDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNV 412

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            +   LK     +A  L + ++  G  P++ TYN+L+ GLCK G ++ A E+ + +   G
Sbjct: 413 LLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKG 472

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             P+  TY  +I+     G L     L   M+  G  P  VT+  L+ A
Sbjct: 473 CRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLVRA 521



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 123/350 (35%), Positives = 199/350 (56%), Gaps = 1/350 (0%)

Query: 222 GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY 281
           G +  A E+ R M + G++P+++ YN ++D  CKEG + EA  L  EM G+G   +  TY
Sbjct: 175 GKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTY 234

Query: 282 NVLITGFSRNGELEQARGLIRDM-LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV 340
           N LI GF   G+ + A  L+ +M +K  ++   +++N ++    + G++ EA N+   M+
Sbjct: 235 NSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMI 294

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
            RG+ P + + N L+ G C  G +S+A+  F  M+ +  +P++ISY+TL+ GYC+   + 
Sbjct: 295 KRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVD 354

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           EA  L  E+  RNLVP  VTYN L+DGL + G +     L E M   G  PD+ITY +++
Sbjct: 355 EALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLL 414

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
           +   K   L  A   F  ++  G+ P+   Y   I G  K G    A  + + +  KG  
Sbjct: 415 DDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCR 474

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
           P++ TYN++++GL + G L+EA  LL +MV DGF P+ +T+  ++ A LE
Sbjct: 475 PNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLVRALLE 524



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 168/333 (50%), Gaps = 1/333 (0%)

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           P +++ +  +      G +G AF +  ++  R       T  TL+ GLC  G    A  L
Sbjct: 89  PSLVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNL 148

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
            ++ +++G   D + Y  ++NG CKMG    A E   +M + G++P+   Y   + G  K
Sbjct: 149 YDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCK 208

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV-GDGFIPDHI 559
            G  +EA  L  EM+ KG   D+ TYN L+HG C  G  + A  LL +MV  +   PD  
Sbjct: 209 EGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVY 268

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
           T+  ++ A  ++G +   R++F  M+++GL P +V+   L++    RG +  A   F  M
Sbjct: 269 TFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRM 328

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
             +G  PNVI+Y+ LING C+++ +D+A  L  +M +  ++P+  TY  L++    +G  
Sbjct: 329 VERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRV 388

Query: 680 QEALRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
                L + M      PD  T++ LL   L ++
Sbjct: 389 LYEWDLVEAMRASGQAPDLITYNVLLDDYLKRE 421



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 181/349 (51%), Gaps = 25/349 (7%)

Query: 103 KPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVV----CVNM--- 155
           K R A+   R +E + GV+ +  ++  +++ L + GL+  A  +   +V    C+++   
Sbjct: 176 KTRDAIELLRKME-KGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTY 234

Query: 156 HGILDVLIGGGLSSCVSIKILDLLLL-------IYT---------KKSMVEQCLLVFNKM 199
           + ++    G G     ++++L+ +++       +YT         K  MV +   VF  M
Sbjct: 235 NSLIHGFCGAGQFQG-AVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLM 293

Query: 200 LRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEM 259
           ++ GL PDV +CN ++      G   +A+EV+  M E G  P++++Y+T+++ +CK   +
Sbjct: 294 IKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMV 353

Query: 260 QEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI 319
            EAL LL EM  R   P+ VTYN L+ G S++G +     L+  M   G      +YN +
Sbjct: 354 DEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVL 413

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           +  Y ++  L +AL L + +V  G++P + TYNILI GLCK GR+  A+  F  +  K  
Sbjct: 414 LDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGC 473

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
            P+I +YN ++ G  R G + EA  L  E+      P  VT++ L+  L
Sbjct: 474 RPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLVRAL 522



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 35/179 (19%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG-------------------- 222
           Y K  MV++ L +  +M +  L+PD    N ++  L  +G                    
Sbjct: 347 YCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPD 406

Query: 223 ---FSV------------KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLW 267
              ++V            KA  +++ + + GI P+I TYN ++D  CK G M+ A E+  
Sbjct: 407 LITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQ 466

Query: 268 EMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEK 326
            +  +GC PN  TYN++I G  R G L++A  L+ +M+  G   +A +++P++    EK
Sbjct: 467 LLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLVRALLEK 525


>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 712

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 151/486 (31%), Positives = 235/486 (48%), Gaps = 14/486 (2%)

Query: 247 NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
           N ++D     G +  A ++  EM  R   P+  +Y +++ G+ R G +      ++DM++
Sbjct: 197 NFVIDVALALGFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIE 256

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
            G  V   +   +I  +SEKG +  A    ++ V  G+ P L  ++ LI GLCK G +  
Sbjct: 257 RGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQ 316

Query: 367 ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL-RSRNLVPTVVTYNTLI 425
           A     EM+RK   P++ ++  L+ G C+ G   +AF LF +L RS N  P V TY  +I
Sbjct: 317 AFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMI 376

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           +G C+   L  A+ L   M  QG++P+  TYT +++G CK GN   A E  + M ++G  
Sbjct: 377 NGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFT 436

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           P+ F Y   I G  K G   EAY+L    L  G   D +TY +L+   C+    ++A  +
Sbjct: 437 PNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAI 496

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
             +M   G  PD  TY  +I        +     LF   +  GL PT  TYT +I  +  
Sbjct: 497 FSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCR 556

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
            G +  A  +F +M+  G +P+ ITY ALI+GLC   ++D+A  L+  M + G+ P + T
Sbjct: 557 DGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVT 616

Query: 666 YTILINENCNAGNWQEAL----RLYKEMLDREI---------EPDYCTHSALLLKQLDKD 712
              L  E C  G+   A+    RL K++  R +         E      +    K LDKD
Sbjct: 617 RVTLAYEYCKQGDSATAMIILERLEKKLWIRTVNTLIRKLCSEKKVGVAALFFHKLLDKD 676

Query: 713 YKVHAV 718
             V  +
Sbjct: 677 LNVDRI 682



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 151/489 (30%), Positives = 246/489 (50%), Gaps = 16/489 (3%)

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           M+ SF + G+++EA+ ++ EMQ  G        N +I      G ++ A  +  +ML   
Sbjct: 164 MVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRA 223

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           +   + SY  ++ GY   G + +     ++M+ RG A   AT  ++I    + G V+ A 
Sbjct: 224 VVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAF 283

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F + ++  + P++I++++L+ G C+ G+I +AF + +E+  +   P V T+  LIDGL
Sbjct: 284 WYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGL 343

Query: 429 CRYGDLEVAQQLKENMI-NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           C+ G  E A +L   ++ +    P+V TYT M+NG CK   L+ A      M  +GL P+
Sbjct: 344 CKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPN 403

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              YT  I G  K G+   AY L + M  +GF P++ TYN ++ GLCK G   EA +LLR
Sbjct: 404 TNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLR 463

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
           + +  G   D +TYT +I       D ++   +F+ M + GL P + TY VLI     + 
Sbjct: 464 RGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQK 523

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
           ++E +   F E    G+ P   TY ++I G CR   I  A   F  M + G  P+  TY 
Sbjct: 524 KVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYG 583

Query: 668 ILINENCNAGNWQEALRLYKEMLDREIEP----------DYCTH-----SALLLKQLDKD 712
            LI+  CN     EA +LY+ M+D  + P          +YC       + ++L++L+K 
Sbjct: 584 ALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILERLEKK 643

Query: 713 YKVHAVEYL 721
             +  V  L
Sbjct: 644 LWIRTVNTL 652



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 143/508 (28%), Positives = 243/508 (47%), Gaps = 4/508 (0%)

Query: 198 KMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG 257
           +M  +GL+   +  N +I V    GF   A +V+  M +  + P   +Y  M+  +C+ G
Sbjct: 183 EMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMG 242

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
            + +    L +M  RG + +  T  ++I+ FS  G + +A    +  +++GL  +  +++
Sbjct: 243 RISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFS 302

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            +I G  + G + +A  + EEMV +G  P + T+  LI GLCK G    A   F +++R 
Sbjct: 303 SLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRS 362

Query: 378 -NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
            N  P++ +Y  ++ GYC+   +  A +L   ++ + LVP   TY  LIDG C+ G+   
Sbjct: 363 DNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGR 422

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
           A +L + M  +G  P++ TY  +++G CK G    A +     L+ GL  D+  YT  I+
Sbjct: 423 AYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILIS 482

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
              +  D  +A  +   M   G  PD+ TYNVL+   C+   +EE+ +L  + VG G +P
Sbjct: 483 EFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLP 542

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
              TYTS+I      G +      F+ M   G  P  +TY  LI       +L+ A   +
Sbjct: 543 TKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLY 602

Query: 617 SEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNA 676
             M   G+ P  +T   L    C  ++ D A  + I    E  L  + T   LI + C+ 
Sbjct: 603 ETMIDNGLSPCEVTRVTLAYEYC--KQGDSATAMIILERLEKKLWIR-TVNTLIRKLCSE 659

Query: 677 GNWQEALRLYKEMLDREIEPDYCTHSAL 704
                A   + ++LD+++  D  T +A 
Sbjct: 660 KKVGVAALFFHKLLDKDLNVDRITLAAF 687



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 131/484 (27%), Positives = 209/484 (43%), Gaps = 27/484 (5%)

Query: 112 RWVE--TQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGIL---DVLIGGG 166
           RW++   + G   D      ++    E G +  A+W  +  V + ++  L     LI G 
Sbjct: 249 RWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLING- 307

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
                             K   ++Q   +  +M+R G  P+V     +I  L   G++ K
Sbjct: 308 ----------------LCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEK 351

Query: 227 AREVY-RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           A  ++ +++     KP++ TY  M++ +CKE ++  A  LL  M+ +G  PN  TY  LI
Sbjct: 352 AFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLI 411

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            G  + G   +A  L+  M K G   +  +YN II G  +KG   EA  L    +  G+ 
Sbjct: 412 DGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLH 471

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
               TY ILI   C+      A   F  M +  + PD+ +YN L+  +CR   + E+  L
Sbjct: 472 ADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKL 531

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
           F+E     L+PT  TY ++I G CR G +  A +    M + G  PD ITY  +++G C 
Sbjct: 532 FEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCN 591

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
              L  A + +  M+  GL P      T      K GD++ A  + E +  K +   + T
Sbjct: 592 ESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILERLEKKLW---IRT 648

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
            N L+  LC    +  A     K++      D IT  +   A  E        DL +  +
Sbjct: 649 VNTLIRKLCSEKKVGVAALFFHKLLDKDLNVDRITLAAFTTACYESNKFALVSDL-SERI 707

Query: 586 RKGL 589
            KG+
Sbjct: 708 SKGI 711



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 82/298 (27%), Positives = 153/298 (51%), Gaps = 1/298 (0%)

Query: 409 LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
           L + NL         ++      G L+ A  +   M N G++        +++ +  +G 
Sbjct: 149 LNNDNLDRATEVMQCMVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGF 208

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
           +  A + F+EML + + PD  +Y   + G  ++G  S+  R  ++M+ +G+  D  T  +
Sbjct: 209 VDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTL 268

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           ++    + G +  A    +K V  G  P+ I ++S+I+   ++G +++  ++   M+RKG
Sbjct: 269 MISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKG 328

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEM-QVKGIRPNVITYNALINGLCRLRRIDQA 647
             P + T+T LI     +G  E AF  F ++ +    +PNV TY  +ING C+  ++++A
Sbjct: 329 WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRA 388

Query: 648 YGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             L I M+E+G++PN  TYT LI+ +C AGN+  A  L   M      P+  T++A++
Sbjct: 389 EMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAII 446



 Score = 40.4 bits (93), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 27/124 (21%), Positives = 57/124 (45%)

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           ++ + +  G+L+ A     EMQ  G+       N +I+    L  +D A  +F +M +  
Sbjct: 164 MVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRA 223

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAV 718
           ++P+  +Y +++   C  G   +  R  K+M++R    D  T + ++    +K +   A 
Sbjct: 224 VVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAF 283

Query: 719 EYLE 722
            Y +
Sbjct: 284 WYFK 287


>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
          Length = 621

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 136/475 (28%), Positives = 235/475 (49%)

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY T+++++C  G++  A + L  +   G +P+   Y   + G+ R G L  A  +   M
Sbjct: 74  TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
              G   +A +Y  ++ G    G++ EA+ +   M     AP    Y  +++GLC+ GR 
Sbjct: 134 PLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRT 193

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            +A     E +     P+I+ YN L+ GYC +G +  A  +F+ +      P V TY  L
Sbjct: 194 EEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTEL 253

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           I GLC+ G +E A  L   M+  G+ P+V+TYT ++ G C  G+L  A    + M   GL
Sbjct: 254 IHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGL 313

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            P+ + ++  I    K     EA      ++ KG   + + Y  L+ GLCK G ++ A+E
Sbjct: 314 VPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADE 373

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           L++KM+ +GF+PD  +Y+S+I        L +   +  +M+ KG+  + VTYT++I    
Sbjct: 374 LMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELV 433

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
                E     F +M   GI P+++TY   +   C   R++ A  + + M + G+ PN  
Sbjct: 434 REVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLV 493

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVE 719
           TY  LI    N G   +A   ++ M+ +  +P+  +++ LL   + K    ++V+
Sbjct: 494 TYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVD 548



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 140/522 (26%), Positives = 244/522 (46%), Gaps = 12/522 (2%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
              +L  GL PD       +      G    A  V+ +M   G   +  TY  +L     
Sbjct: 95  LTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLG 154

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
            G ++EA+ +   M+   C+P+   Y  ++ G    G  E+A  L+ + +  G + +   
Sbjct: 155 AGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVV 214

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           YN +I GY   G +  AL + E M     +P + TY  LI+GLCK G+V  A   F  M+
Sbjct: 215 YNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMV 274

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
              + P++++Y  L+ G C  G++  AF L   + +  LVP   T++ LID LC+   +E
Sbjct: 275 EAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVE 334

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            AQ    +++ +G+  + + YT +++G CK G +  A E   +M+ +G  PD  +Y++ I
Sbjct: 335 EAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLI 394

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
            G  +    S+A  + E+M+ KG     +TY +++  L +    E   ++  KM+  G  
Sbjct: 395 DGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGIN 454

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           PD +TYT  + +  E G +     +   M+ +G+ P LVTY  LI  +A  G +  AF  
Sbjct: 455 PDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFST 514

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF--IDMEEEGILPNKYT-------- 665
           F  M  KG +PN  +Y  L+  + +    D +  ++   DM++  +L    T        
Sbjct: 515 FEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAA 574

Query: 666 --YTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             Y+  I   C     +EA   +  M +  + P    +++++
Sbjct: 575 DIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSII 616



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 241/484 (49%), Gaps = 23/484 (4%)

Query: 188 MVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
           MV + + VF  M  +   PD      ++  L + G + +A  +       G +P+IV YN
Sbjct: 157 MVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYN 216

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
            ++D +C  GEM+ AL++   M G  CSPN  TY  LI G  ++G++E+A  L   M++ 
Sbjct: 217 ALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEA 276

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           GL+ +  +Y  +I G   +G L  A  L   M T G+ P   T+++LI  LCK  +V +A
Sbjct: 277 GLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEA 336

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
           +     +++K V  + + Y +L+ G C++G I  A  L  ++ S   VP   +Y++LIDG
Sbjct: 337 QLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDG 396

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           LCR   L  A  + E+M+ +GI    +TYTI+++   +       ++ F++M+  G+ PD
Sbjct: 397 LCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPD 456

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              YT  +    + G   +A  +  +M+ +G  P+L+TYN L+ G   LG + +A     
Sbjct: 457 IVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFE 516

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
            MVG G+ P+  +YT ++   ++        D++     K L        VL+     R 
Sbjct: 517 VMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQ-------VLLEDITER- 568

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
           +L LA                  Y+  I  LCR+ R+++A   F+ M+   + P++  YT
Sbjct: 569 QLPLA---------------ADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYT 613

Query: 668 ILIN 671
            +I+
Sbjct: 614 SIID 617



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 124/482 (25%), Positives = 220/482 (45%), Gaps = 37/482 (7%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVV----------ETVVCVNM-HGILDV------ 161
           G  R  F +  +L  L+ +G++R A  V           +T V   M HG+ +       
Sbjct: 137 GCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEA 196

Query: 162 ------LIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRII 215
                  +  G     +I + + L+  Y     +E  L VF  M  N   P+V+    +I
Sbjct: 197 EVLLEEAMSNGFEP--NIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELI 254

Query: 216 KVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCS 275
             L  +G   +A  ++  M E G++P++VTY  ++   C EG +Q A  LL  M+  G  
Sbjct: 255 HGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLV 314

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           PN  T++VLI    +  ++E+A+  +  ++K G+KV+   Y  +I G  + G +  A  L
Sbjct: 315 PNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADEL 374

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
            ++M++ G  P   +Y+ LI GLC+  ++S A     +M+ K +    ++Y  ++    R
Sbjct: 375 MQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVR 434

Query: 396 SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
                    +FD++ +  + P +VTY   +   C  G +E A+ +   M+++G+ P+++T
Sbjct: 435 EVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVT 494

Query: 456 YTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI------------AGELKLGD 503
           Y  ++ G   +G +S A   F  M+ KG +P+  +YT  +                K+ D
Sbjct: 495 YNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIAD 554

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
             +   L E++  +  P     Y+  +  LC++  LEEA      M      P    YTS
Sbjct: 555 MKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTS 614

Query: 564 II 565
           II
Sbjct: 615 II 616



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 146/311 (46%), Gaps = 6/311 (1%)

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
           +P +   NTL+  L R+      + L   M  +    ++ TYT ++N  C  G++  A++
Sbjct: 38  LPPLRCLNTLLMALARHRMFPDMESLASRMPAR----NLRTYTTLINAYCLAGDIPAAKQ 93

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
               +L  GL PD +AYT+ + G  + G  + A R+   M  +G      TY  L+HGL 
Sbjct: 94  HLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLL 153

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
             G + EA  +   M  D   PD   Y +++H   E G       L    +  G  P +V
Sbjct: 154 GAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIV 213

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
            Y  LI  +   G +E A   F  M      PNV TY  LI+GLC+  ++++A  LF  M
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRM 273

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYK 714
            E G+ PN  TYT LI   CN G+ Q A RL   M    + P+  T S +L+  L K  K
Sbjct: 274 VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFS-VLIDALCKREK 332

Query: 715 VHAVE-YLESL 724
           V   + +L SL
Sbjct: 333 VEEAQLFLGSL 343


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 152/533 (28%), Positives = 259/533 (48%), Gaps = 25/533 (4%)

Query: 195 VFNKMLRNG---LLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLD 251
           +FN+M R G   + PD+     +I    D G           + + G++   VT+  +L 
Sbjct: 128 MFNRMARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLR 187

Query: 252 SFCKEGEMQEALEL-LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
           + C E    +A+ + L  M   GC+P+  +Y  L+ G     + E+A  LI  M + G  
Sbjct: 188 TLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDN 247

Query: 311 VSAH--SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
              +  SY  +I G+ ++G + +A  L  +M+  G+ P + T N +I GLCK   +  A 
Sbjct: 248 CPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAE 307

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               +M+ ++++P+  +YN+L++GY  SG   EA  +  E+      P VVTY+ LID L
Sbjct: 308 AVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCL 367

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G    A+++  +MI  G  P+  TY  +++G    GNL       + M++ G++P R
Sbjct: 368 CKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGR 427

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             +  +I    K G   EA     +M  +GF PD++ Y  ++ GLCK+G L++A     +
Sbjct: 428 HVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQ 487

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M+ DG  PD IT+ ++IH     G   +  +LF  M+ +G+ P + T+  +I      G+
Sbjct: 488 MIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGK 547

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALING------------------LCRLRRIDQAYGL 650
           +  A   F  M   G +PNV++YN +I+G                  L  L+     +  
Sbjct: 548 VTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNT 607

Query: 651 FID-MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
            +D M   G+ P+  T   LI+  C  G  ++ L L++EML +  + D  T +
Sbjct: 608 LLDGMVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITEN 660



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 161/564 (28%), Positives = 270/564 (47%), Gaps = 35/564 (6%)

Query: 96  VLNRIREKPRIALRFFRWVETQPGVKR---DEFVFCTILEILIESGLLRSAYWVVETVVC 152
           V + +R+ P +A+  F  +  + G K+   D   F  ++    ++G L   +        
Sbjct: 114 VSSSVRDGPALAVSMFNRM-ARAGAKKVAPDIATFGILISCCCDAGCLNLGF-------- 164

Query: 153 VNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCN 212
                 L  +I  GL +  ++    LL  +  +K   +   +V  +M   G  PDV +  
Sbjct: 165 ----AALGQIIKTGLRA-QAVTFTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYT 219

Query: 213 RIIKVLRDNGFSVKAREVYRMMGEFG--IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQ 270
            ++K L       +A E+  MM E G    P++V+Y T++  F KEG++ +A  L  +M 
Sbjct: 220 TLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKML 279

Query: 271 GRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLV 330
             G  PN VT N +I G  +   +++A  +++ M+   +  +  +YN +I GY   G   
Sbjct: 280 DHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWT 339

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
           EA+ + +EM   G  P + TY++LI  LCK G  ++AR  F  M++    P+  +Y +LL
Sbjct: 340 EAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLL 399

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
           +GY   GN+ +   + D +    + P    +N  I   C+ G L+ A      M  QG +
Sbjct: 400 HGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFM 459

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
           PD++ YT +++G CK+G L  A   F +M+  GL PD   + T I G    G   +A  L
Sbjct: 460 PDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEEL 519

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
             EM+ +G PP++ T+N ++  L K G + EA +L   M   G  P+ ++Y ++IH    
Sbjct: 520 FYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFI 579

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
            G++     L ++ML  GL PT VT+  L+                  M   G++P+V+T
Sbjct: 580 AGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG----------------MVSMGLKPDVVT 623

Query: 631 YNALINGLCRLRRIDQAYGLFIDM 654
              LI+  C   RI+    LF +M
Sbjct: 624 CKTLIDSCCEDGRIEDILTLFREM 647



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/416 (31%), Positives = 220/416 (52%), Gaps = 16/416 (3%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K+  V +   +F KML +G+ P+V  CN +I  L       KA  V + M +  I P+
Sbjct: 262 FFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPN 321

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             TYN+++  +   G+  EA+ +L EM   G  PN VTY++LI    ++G   +AR +  
Sbjct: 322 CTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFN 381

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M++ G K +A +Y  ++ GY+ +G LV+  N+++ MV  G+ P    +NI IY  CK G
Sbjct: 382 SMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCG 441

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R+ +A   F +M ++  +PDI++Y T++ G C+ G + +A   F ++    L P ++T+N
Sbjct: 442 RLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFN 501

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           TLI G   +G  E A++L   M+++GI P+V T+  M++   K G ++ AR+ F+ M R 
Sbjct: 502 TLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRA 561

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G +P+  +Y T I G    G+  E  +L ++ML  G  P  +T+N L+ G          
Sbjct: 562 GAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG---------- 611

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
                 MV  G  PD +T  ++I +  E G +     LF  ML K      +T  +
Sbjct: 612 ------MVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENI 661



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 144/529 (27%), Positives = 252/529 (47%), Gaps = 13/529 (2%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE-------VYRMMGEFGIK-- 240
           E  L +F+++L+      +   N+++  +     S   R+       ++  M   G K  
Sbjct: 81  EDALDLFDELLQRARPGSIYALNQLLTTVARAPVSSSVRDGPALAVSMFNRMARAGAKKV 140

Query: 241 -PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
            P I T+  ++   C  G +      L ++   G     VT+  L+           A  
Sbjct: 141 APDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMN 200

Query: 300 LI-RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG--VAPTLATYNILIY 356
           ++ R M +LG      SY  ++ G   +    EA  L   M   G    P + +Y  +I+
Sbjct: 201 IVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIH 260

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           G  K G V  A   F +ML   + P++++ N+++ G C+   + +A  +  ++   +++P
Sbjct: 261 GFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMP 320

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
              TYN+LI G    G    A ++ + M   G  P+V+TY+++++  CK G  + ARE F
Sbjct: 321 NCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIF 380

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           N M++ G +P+   Y + + G    G+  +   +++ M+  G  P    +N+ ++  CK 
Sbjct: 381 NSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKC 440

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G L+EA+    KM   GF+PD + YT++I    ++G L      F  M+  GLSP ++T+
Sbjct: 441 GRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITF 500

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
             LIH  A  G+ E A   F EM  +GI PNV T+N++I+ L +  ++ +A  LF  M  
Sbjct: 501 NTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPR 560

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            G  PN  +Y  +I+    AG   E ++L  +ML   ++P   T + LL
Sbjct: 561 AGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLL 609



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 140/478 (29%), Positives = 234/478 (48%), Gaps = 14/478 (2%)

Query: 260 QEALELLWEMQGRGCSPNGVTYNVLITGFSR---NGELEQARGLIRDMLKLGLKVSAHSY 316
           ++AL+L  E+  R    +    N L+T  +R   +  +     L   M     +  A   
Sbjct: 81  EDALDLFDELLQRARPGSIYALNQLLTTVARAPVSSSVRDGPALAVSMFNRMARAGAKKV 140

Query: 317 NPIICGYS-------EKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
            P I  +        + G L        +++  G+     T+  L+  LC   R SDA +
Sbjct: 141 APDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMN 200

Query: 370 RFFE-MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR--SRNLVPTVVTYNTLID 426
                M      PD+ SY TLL G C      EA  L   +     N  P VV+Y T+I 
Sbjct: 201 IVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIH 260

Query: 427 GLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
           G  + GD+  A  L   M++ GI P+V+T   +++G CK+  +  A     +M+ + + P
Sbjct: 261 GFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMP 320

Query: 487 DRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
           +   Y + I G L  G  +EA R+ +EM   G  P+++TY++L+  LCK G   EA E+ 
Sbjct: 321 NCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIF 380

Query: 547 RKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAAR 606
             M+  G  P+  TY S++H     G+L    ++ + M++ G+ P    + + I+A+   
Sbjct: 381 NSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKC 440

Query: 607 GRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
           GRL+ A + F++MQ +G  P+++ Y  +I+GLC++ R+D A   F  M ++G+ P+  T+
Sbjct: 441 GRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITF 500

Query: 667 TILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
             LI+     G W++A  L+ EM+DR I P+  T ++++ K L K+ KV     L  L
Sbjct: 501 NTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDK-LFKEGKVTEARKLFDL 557



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/303 (30%), Positives = 152/303 (50%), Gaps = 16/303 (5%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +FN M+++G  P+      ++      G  V    V  +M + G++P    +N  + ++C
Sbjct: 379 IFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYC 438

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K G + EA     +MQ +G  P+ V Y  +I G  + G L+ A      M+  GL     
Sbjct: 439 KCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDII 498

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           ++N +I G++  G   +A  L  EM+ RG+ P + T+N +I  L K G+V++AR  F  M
Sbjct: 499 TFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLM 558

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
            R    P+++SYNT+++GY  +G +GE   L D++    L PT VT+NTL+DG       
Sbjct: 559 PRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG------- 611

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
                    M++ G+ PDV+T   +++  C+ G +      F EML K  + D      +
Sbjct: 612 ---------MVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENIK 662

Query: 495 IAG 497
           + G
Sbjct: 663 LRG 665



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 9/216 (4%)

Query: 516 AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLR 575
           AK   PD+ T+ +L+   C  G L      L +++  G     +T+T ++     +   +
Sbjct: 137 AKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRT---LCAEK 193

Query: 576 RGRDLFNNMLRK----GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG--IRPNVI 629
           R  D  N +LR+    G +P + +YT L+    A  + E A      M   G    PNV+
Sbjct: 194 RTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVV 253

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           +Y  +I+G  +   + +AY LF  M + GI PN  T   +I+  C      +A  + ++M
Sbjct: 254 SYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQM 313

Query: 690 LDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
           +D  I P+  T+++L+   L       AV  L+ ++
Sbjct: 314 IDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMS 349



 Score = 45.8 bits (107), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 19/124 (15%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRII-------------KVLRD------NGFSV 225
           K+  V +   +F+ M R G  P+V + N +I             K+L D         +V
Sbjct: 544 KEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAV 603

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
               +   M   G+KP +VT  T++DS C++G +++ L L  EM G+    + +T N+ +
Sbjct: 604 TFNTLLDGMVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENIKL 663

Query: 286 TGFS 289
            G +
Sbjct: 664 RGVT 667


>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
 gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
          Length = 866

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 161/556 (28%), Positives = 262/556 (47%), Gaps = 75/556 (13%)

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
           I+  LR++   +    +Y+ +   G +P + T N +L + C  G M+ A  +   M  R 
Sbjct: 117 ILAALRESRLDL-VEALYKDLLLSGAQPDVFTRNLLLQALCDAGRMELAQRVFDAMPAR- 174

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
              N  ++ +L  G+ R G    A  ++  M  + L V     N ++ G+ ++GL+ EA 
Sbjct: 175 ---NEFSFGILARGYCRAGRSIDALKVLDGMPSMNLVVC----NTVVAGFCKEGLVEEAE 227

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN-----VIPDIISYNT 388
            L E M  +G+AP + T+N  I  LCK GRV DA +R F+ ++++       PD ++++ 
Sbjct: 228 RLVERMRVQGLAPNVVTFNARISALCKAGRVLDA-YRIFQDMQEDWQHGLPRPDQVTFDV 286

Query: 389 LLYGYC-----------------------------------RSGNIGEAFLLFDELRSRN 413
           +L G+C                                   R+G +GEA  L  E+    
Sbjct: 287 MLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEG 346

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL-PDVITYTIMVNGSCKMGNLSMA 472
           + P   TYN ++ GLC+ G    A+++ EN I  G++ PDV+TYT +++  C  GN++ A
Sbjct: 347 IQPNSYTYNIIVSGLCKEGKAFDARRV-ENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAA 405

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
               +EM +KG  P+ F Y   +    + G T+EA RL E M  KG+  D    N+++ G
Sbjct: 406 NRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDG 465

Query: 533 LCKLGSLEEANELLRKM----------VGDGFI-------------PDHITYTSIIHASL 569
           LC+   L+ A +++  M          +G+ F+             PD ITY+ +I A  
Sbjct: 466 LCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALC 525

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
           + G     +     M+ K +SP  V Y   IH +   G+  LA     +M+ KG  P+  
Sbjct: 526 KEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTR 585

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           TYN LI G     + ++   L  +M+E+GI PN  TY  LI   C  G   +A+ L  EM
Sbjct: 586 TYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEM 645

Query: 690 LDREIEPDYCTHSALL 705
           L  E+ P+  +   L+
Sbjct: 646 LQNELVPNITSFDLLI 661



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 165/600 (27%), Positives = 257/600 (42%), Gaps = 110/600 (18%)

Query: 211 CNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQ 270
           CN ++      G   +A  +   M   G+ P++VT+N  + + CK G + +A  +  +MQ
Sbjct: 210 CNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQ 269

Query: 271 ---GRGCS-PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEK 326
                G   P+ VT++V+++GF   G +++AR L+  M   G      SYN  + G    
Sbjct: 270 EDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRN 329

Query: 327 GLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI-PDIIS 385
           G + EA  L  EM   G+ P   TYNI++ GLCK G+  DAR R    +R  V+ PD+++
Sbjct: 330 GRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDAR-RVENFIRSGVMSPDVVT 388

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL--------------------- 424
           Y +LL+ YC  GNI  A  + DE+  +   P   TYN L                     
Sbjct: 389 YTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMN 448

Query: 425 --------------IDGLCRYGDLEVAQQLKENM-----------------------INQ 447
                         IDGLCR   L+VA  + + M                       I+Q
Sbjct: 449 EKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQ 508

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
             LPD ITY+I+++  CK G    A++   EM+ K + PD   Y T I G  K G TS A
Sbjct: 509 RCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLA 568

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
            ++  +M  KG  P   TYN+L+ G  +    EE  +L+ +M   G  P+ +TY S+I +
Sbjct: 569 IKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKS 628

Query: 568 SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF----------- 616
             + G + +   L + ML+  L P + ++ +LI A+        A M F           
Sbjct: 629 FCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDAALRTCGQKE 688

Query: 617 -------SEMQVKG----------------IRPNVITYNALINGLCRLRRIDQAYGLFID 653
                  +E+   G                +      Y  +I+GLC +  +D A+ L   
Sbjct: 689 VLYCLMCTELTTYGKWIEAKNILEMALEMRVSIQSFPYKQIISGLCEVGEVDHAHSLLKL 748

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYK---EMLDR---------EIEPDYCTH 701
           +  +  L +   +  +I+   + G  Q+   L     EM DR         +I P  C H
Sbjct: 749 LIAKRHLFDPAAFMPVIDALGDRGKKQDVDMLSAKMMEMADRNDGLGTDSGKITPGSCKH 808



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 133/463 (28%), Positives = 209/463 (45%), Gaps = 45/463 (9%)

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           P    YN LI    R   L+    L +D+L  G +    + N ++    + G +  A  +
Sbjct: 108 PTTPVYNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAGRMELAQRV 167

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
            + M  R       ++ IL  G C+ GR  DA      M   N    ++  NT++ G+C+
Sbjct: 168 FDAMPARNEF----SFGILARGYCRAGRSIDALKVLDGMPSMN----LVVCNTVVAGFCK 219

Query: 396 SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL----EVAQQLKENMINQGILP 451
            G + EA  L + +R + L P VVT+N  I  LC+ G +     + Q ++E+  +    P
Sbjct: 220 EGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPRP 279

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           D +T+ +M++G C  G +  AR   + M   G      +Y   ++G ++ G   EA  L 
Sbjct: 280 DQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELL 339

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
            EM  +G  P+  TYN++V GLCK G   +A  +   +      PD +TYTS++HA    
Sbjct: 340 REMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSK 399

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
           G++     + + M +KG +P   TY VL+ +    GR   A      M  KG   +    
Sbjct: 400 GNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGC 459

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEG-----------------------ILPNKYTYTI 668
           N +I+GLCR  R+D A  +   M EEG                        LP++ TY+I
Sbjct: 460 NIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSI 519

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPD----------YCTH 701
           LI+  C  G + EA +   EM+ ++I PD          YC H
Sbjct: 520 LISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKH 562



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 123/539 (22%), Positives = 218/539 (40%), Gaps = 109/539 (20%)

Query: 107 ALRFFRWVET--QPGVKR-DEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLI 163
           A R F+ ++   Q G+ R D+  F  +L    ++G +  A  +V+ + C           
Sbjct: 261 AYRIFQDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRC----------- 309

Query: 164 GGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGF 223
           GG L     ++  +  L    +   V +   +  +M   G+ P+    N I+  L   G 
Sbjct: 310 GGFLRR---VESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGK 366

Query: 224 SVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNV 283
           +  AR V   +    + P +VTY ++L ++C +G +  A  +L EM  +GC+PN  TYNV
Sbjct: 367 AFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNV 426

Query: 284 LITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG 343
           L+    R G   +A  L+  M + G  +     N II G      L  A+++ + M   G
Sbjct: 427 LLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEG 486

Query: 344 VA-----------------------PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
                                    P   TY+ILI  LCK GR  +A+ +  EM+ K++ 
Sbjct: 487 SGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDIS 546

Query: 381 PDIISYNTLLYGYCRSGNIG-----------------------------------EAFLL 405
           PD + Y+T ++GYC+ G                                      E   L
Sbjct: 547 PDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKL 606

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
             E++ + + P V+TYN+LI   C+ G +  A  L + M+   ++P++ ++ +++   CK
Sbjct: 607 MSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCK 666

Query: 466 MGNLSMAREFFNEMLRKGLQPD----------------------------------RFAY 491
           + +   A+  F+  LR   Q +                                   F Y
Sbjct: 667 ITDFPSAQMVFDAALRTCGQKEVLYCLMCTELTTYGKWIEAKNILEMALEMRVSIQSFPY 726

Query: 492 TTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
              I+G  ++G+   A+ L + ++AK    D   +  ++  L   G  ++ + L  KM+
Sbjct: 727 KQIISGLCEVGEVDHAHSLLKLLIAKRHLFDPAAFMPVIDALGDRGKKQDVDMLSAKMM 785


>gi|300681579|emb|CBI75523.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 138/460 (30%), Positives = 239/460 (51%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G++P+  TY T L   C   +++ A   L  +  RG   N   +N +I GF  +G++ +A
Sbjct: 243 GVRPNAATYATYLYGLCHAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKA 302

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             +   M K G     HSY+ ++ G  ++G ++    +  EM   G+ P L +Y+ L++G
Sbjct: 303 IEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHG 362

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           LC+ GRV  A   F  +  +    D I Y+ +L+G C+  ++   + L++++   N VP 
Sbjct: 363 LCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPD 422

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
              Y++LI   CR+  L+ A ++ E M++ GI P+V+T TI+V+G    G +  A  F +
Sbjct: 423 AYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLD 482

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           ++ + G+ P    Y   I G  K+   ++ + +  +M+ +G+ PD + Y++++ G  K  
Sbjct: 483 KVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKAL 542

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            L+EA  L  KMV +G  P+  TYTS+I+       L     LF +M+ +GL+P  + YT
Sbjct: 543 DLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYT 602

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
            LI  +  R  ++ A   F EM+ +G+  +   Y  LI G  ++  +D A     +M  +
Sbjct: 603 SLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNK 662

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           G+ P   TYT LI      G+ ++A+ +Y  ML   I PD
Sbjct: 663 GLTPTVVTYTDLIVGYFKIGDEKKAMAMYNSMLQAGIAPD 702



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 130/461 (28%), Positives = 234/461 (50%), Gaps = 2/461 (0%)

Query: 247 NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
           N +L    +  ++  A  L  +M+  G SPN  +Y+VL++ ++   +L     L      
Sbjct: 180 NFLLKRLVEGNQIMYARSLFDDMKSSGPSPNVYSYSVLMSMYTHGAKLCLEEALELLSEM 239

Query: 307 L--GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
              G++ +A +Y   + G      +  A N  + +  RG       +N +I+G C  G+V
Sbjct: 240 EVEGVRPNAATYATYLYGLCHAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQV 299

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
             A   F  M +   +PD+ SY+ L+ G C+ G++   + +  E+    + P +V+Y++L
Sbjct: 300 HKAIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSL 359

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           + GLCR G +E+A +L + + +QG   D I Y+I+++G C+  +L +  + +N+M+    
Sbjct: 360 LHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNF 419

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            PD + Y++ I    +     EA  + E M++ G  P+++T  +LVHG    G + EA  
Sbjct: 420 VPDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFL 479

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
            L K+   G +P   TY  IIH   ++        +F +M+++G  P  V Y+++I    
Sbjct: 480 FLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFV 539

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
               L+ AF  + +M  +G +PN+ TY +LINGLC   ++ +   LF  M  EG+ P++ 
Sbjct: 540 KALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRI 599

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            YT LI   C   N + AL +++EM    +  D   ++ L+
Sbjct: 600 LYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLI 640



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 205/419 (48%), Gaps = 41/419 (9%)

Query: 328 LLVEALNLEEEMVT----RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
           + VE    E+ +VT    + V   L   N L+  L +  ++  AR  F +M      P++
Sbjct: 152 VFVELSMFEDALVTYVEAKKVGVELQVCNFLLKRLVEGNQIMYARSLFDDMKSSGPSPNV 211

Query: 384 ISYNTL-------------------------------------LYGYCRSGNIGEAFLLF 406
            SY+ L                                     LYG C +  +  A+   
Sbjct: 212 YSYSVLMSMYTHGAKLCLEEALELLSEMEVEGVRPNAATYATYLYGLCHAKQVKSAWNFL 271

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
             L  R        +N +I G C  G +  A ++ + M   G +PDV +Y+I+V+G CK 
Sbjct: 272 QMLCQRGYPCNNYCFNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPDVHSYSILVDGLCKQ 331

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G++        EM R G+ P+  +Y++ + G  + G    A+ L + +  +GF  D I Y
Sbjct: 332 GDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVY 391

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           ++++HG C+   LE   +L   MV   F+PD   Y+S+I+A      L+   ++F  M+ 
Sbjct: 392 SIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMVS 451

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
            G+ P +VT T+L+H  +  G +  AF++  +++  G+ P++ TY  +I+GLC++ + + 
Sbjct: 452 DGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRVIIHGLCKVNKPND 511

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            +G+F DM + G +P+   Y+I+I+    A + QEA RLY +M+D   +P+  T+++L+
Sbjct: 512 MWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLI 570


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 138/441 (31%), Positives = 230/441 (52%)

Query: 277 NGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLE 336
           NG  Y  ++    R  +L+ +  L   M++     S   ++ ++   S+       + L 
Sbjct: 45  NGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLW 104

Query: 337 EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS 396
           E+M   G+   L T NIL+   C+  ++S A     +M++    P I+++ +LL G+CR 
Sbjct: 105 EQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRG 164

Query: 397 GNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
             + +A  +FD++      P VV YNT+IDGLC+   ++ A  L   M   GI PDV+TY
Sbjct: 165 DRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTY 224

Query: 457 TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA 516
             +++G C  G  S A    + M ++ + PD F +   I   +K G  SEA    EEM+ 
Sbjct: 225 NSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIR 284

Query: 517 KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
           +   PD++TY++L++GLC    L+EA E+   MV  G  PD +TY+ +I+   +   +  
Sbjct: 285 RSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEH 344

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
           G  LF  M ++G+    VTYT+LI  +   G+L +A   F  M   G+ PN+ITYN L++
Sbjct: 345 GMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLH 404

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
           GLC   +I++A  +  DM++ G+  +  TY I+I   C AG   +A  +Y  +  + + P
Sbjct: 405 GLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMP 464

Query: 697 DYCTHSALLLKQLDKDYKVHA 717
           D  T++ ++L    K  +  A
Sbjct: 465 DIWTYTTMMLGLYKKGLRREA 485



 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 139/439 (31%), Positives = 231/439 (52%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           ++  L +F  M++   LP + + +R++  +           ++  M   GI  ++ T N 
Sbjct: 62  LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +L+ FC+  ++  AL  L +M   G  P+ VT+  L+ GF R   +  A  +   M+ +G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            K +   YN II G  +   +  AL+L   M   G+ P + TYN LI GLC  GR SDA 
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
                M ++ + PD+ ++N L+    + G + EA   ++E+  R+L P +VTY+ LI GL
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C Y  L+ A+++   M+++G  PDV+TY+I++NG CK   +    + F EM ++G+  + 
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             YT  I G  + G  + A  +   M+  G  P++ITYNVL+HGLC  G +E+A  +L  
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILAD 421

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M  +G   D +TY  II    + G++    D++ ++  +GL P + TYT ++     +G 
Sbjct: 422 MQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGL 481

Query: 609 LELAFMYFSEMQVKGIRPN 627
              A   F +M+  GI PN
Sbjct: 482 RREADALFRKMKEDGILPN 500



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 131/454 (28%), Positives = 240/454 (52%)

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           Y  ML +  +  ++ ++L+L + M      P+   ++ L++  S+  + +    L   M 
Sbjct: 49  YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
            LG+  +  + N ++  +     L  AL+   +M+  G  P++ T+  L+ G C+  RV 
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
           DA + F +M+     P+++ YNT++ G C+S  +  A  L + +    + P VVTYN+LI
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
            GLC  G    A ++   M  + I PDV T+  +++   K G +S A EF+ EM+R+ L 
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           PD   Y+  I G        EA  +   M++KG  PD++TY++L++G CK   +E   +L
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
             +M   G + + +TYT +I      G L    ++F  M+  G+ P ++TY VL+H    
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCD 408

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
            G++E A +  ++MQ  G+  +++TYN +I G+C+   +  A+ ++  +  +G++P+ +T
Sbjct: 409 NGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWT 468

Query: 666 YTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
           YT ++      G  +EA  L+++M +  I P+ C
Sbjct: 469 YTTMMLGLYKKGLRREADALFRKMKEDGILPNEC 502



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 131/425 (30%), Positives = 221/425 (52%), Gaps = 4/425 (0%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PSI  ++ +L +  K  +    + L  +MQ  G   N  T N+L+  F R  +L  A   
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  M+KLG + S  ++  ++ G+     + +AL + ++MV  G  P +  YN +I GLCK
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
             +V +A      M +  + PD+++YN+L+ G C SG   +A  +   +  R + P V T
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           +N LID   + G +  A++  E MI + + PD++TY++++ G C    L  A E F  M+
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            KG  PD   Y+  I G  K        +L  EM  +G   + +TY +L+ G C+ G L 
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
            A E+ R+MV  G  P+ ITY  ++H   + G + +   +  +M + G+   +VTY ++I
Sbjct: 379 VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIII 438

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR--LRRIDQAYGLFIDMEEEG 658
                 G +  A+  +  +  +G+ P++ TY  ++ GL +  LRR  +A  LF  M+E+G
Sbjct: 439 RGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRR--EADALFRKMKEDG 496

Query: 659 ILPNK 663
           ILPN+
Sbjct: 497 ILPNE 501



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 183/381 (48%), Gaps = 35/381 (9%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           ++LL  + + S +   L    KM++ G  P +     ++           A  ++  M  
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG 179

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G KP++V YNT++D  CK  ++  AL+LL  M+  G  P+ VTYN LI+G   +G    
Sbjct: 180 MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSD 239

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  ++  M K  +     ++N +I    ++G + EA    EEM+ R + P + TY++LIY
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIY 299

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV- 415
           GLC + R+ +A   F  M+ K   PD+++Y+ L+ GYC+S  +     LF E+  R +V 
Sbjct: 300 GLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR 359

Query: 416 ----------------------------------PTVVTYNTLIDGLCRYGDLEVAQQLK 441
                                             P ++TYN L+ GLC  G +E A  + 
Sbjct: 360 NTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVIL 419

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
            +M   G+  D++TY I++ G CK G ++ A + +  +  +GL PD + YTT + G  K 
Sbjct: 420 ADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKK 479

Query: 502 GDTSEAYRLQEEMLAKGFPPD 522
           G   EA  L  +M   G  P+
Sbjct: 480 GLRREADALFRKMKEDGILPN 500



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 118/269 (43%), Gaps = 35/269 (13%)

Query: 456 YTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML 515
           Y  M+    +   L  + + F  M++    P    ++  ++   K+        L E+M 
Sbjct: 49  YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108

Query: 516 AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLR 575
             G P +L T N+L++  C+   L  A   L KM+                         
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMI------------------------- 143

Query: 576 RGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALI 635
                     + G  P++VT+  L++      R+  A   F +M   G +PNV+ YN +I
Sbjct: 144 ----------KLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTII 193

Query: 636 NGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIE 695
           +GLC+ +++D A  L   ME++GI P+  TY  LI+  C++G W +A R+   M  REI 
Sbjct: 194 DGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIY 253

Query: 696 PDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           PD  T +AL+   + +     A E+ E +
Sbjct: 254 PDVFTFNALIDACVKEGRVSEAEEFYEEM 282


>gi|449477018|ref|XP_004154904.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 567

 Score =  242 bits (617), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 142/464 (30%), Positives = 242/464 (52%), Gaps = 5/464 (1%)

Query: 91  ELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSA--YWVVE 148
           EL+  VL  +R  P  +L FF+    QP  + D   +C I+ IL  + + +    Y    
Sbjct: 99  ELMDLVLRNLRLNPDASLEFFKLASKQPKFRPDVSSYCKIVHILSRARMYKEVRVYLNEL 158

Query: 149 TVVCVNMH---GILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLL 205
            V+C N +    + D L+        S  + D++L +Y +K M +  L VF+ M + G +
Sbjct: 159 VVLCKNNYIASAVWDELVSVYREFSFSPTVFDMILKVYAEKGMTKFALCVFDNMGKCGRV 218

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P +++CN ++  L  NG + KA  VY  M   GI P I +Y  M++++CKEG + EA   
Sbjct: 219 PSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNF 278

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           + EM+   C PN VTYN LI G+   G++  A+ ++  M + G+  ++ +Y  +I GY +
Sbjct: 279 VKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCK 338

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
           +G + +A  L   M+ + +      Y +LI+  C  GRV DA      ML+  +  + + 
Sbjct: 339 RGQMEQAEKLFGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVI 398

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
            N+L+ GYC+ G++ +A  +   ++  NL P    YNTL+DG C+  D   A +L + M 
Sbjct: 399 CNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMH 458

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
           N+G+   V+TY  ++     +G++  A   +N M ++G+ P+   Y T +    K+G   
Sbjct: 459 NKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFD 518

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
            A  + ++ L+KGF   +  YN ++ G CK+  L +A E+  KM
Sbjct: 519 RAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKM 562



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 185/378 (48%)

Query: 312 SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRF 371
           S   ++ I+  Y+EKG+   AL + + M   G  P+L + N L+  L + G    A   +
Sbjct: 185 SPTVFDMILKVYAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVY 244

Query: 372 FEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY 431
            +M+   ++PDI SY  ++  YC+ G + EAF    E+      P VVTYN+LIDG    
Sbjct: 245 EQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSL 304

Query: 432 GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAY 491
           GD+  A+++   M  +GI  +  TYT+++ G CK G +  A + F  M+ K L  D   Y
Sbjct: 305 GDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLFGCMMEKNLFVDEHVY 364

Query: 492 TTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
              I      G   +A R+++ ML  G   + +  N L++G CKLG + +A E+L  M  
Sbjct: 365 GVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKD 424

Query: 552 DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLEL 611
               PD   Y +++    +  D  +   L + M  KG++ T+VTY  L+      G +E 
Sbjct: 425 WNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEH 484

Query: 612 AFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
           A   ++ M  +G+ PN +TY  L++   ++   D+A  ++ D   +G   +   Y  +I 
Sbjct: 485 ALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMIC 544

Query: 672 ENCNAGNWQEALRLYKEM 689
             C      +A  ++ +M
Sbjct: 545 GFCKMEKLVQAQEIFLKM 562



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 189/385 (49%)

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
           R  S +   +++++  ++  G  + A  +  +M K G   S  S N ++    + G   +
Sbjct: 180 REFSFSPTVFDMILKVYAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFK 239

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
           AL + E+M+  G+ P + +Y I++   CK GRV +A +   EM R    P++++YN+L+ 
Sbjct: 240 ALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLID 299

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
           GY   G++  A  +   +  + +     TY  LI G C+ G +E A++L   M+ + +  
Sbjct: 300 GYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLFGCMMEKNLFV 359

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           D   Y ++++  C  G +  A    + ML+ GL+ +     + I G  KLG  ++A  + 
Sbjct: 360 DEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVL 419

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
             M      PD   YN L+ G CK     +A +L  +M   G     +TY +++     +
Sbjct: 420 VSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHV 479

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
           G +     ++N M ++G++P  VTY  L+ A    G  + A M + +   KG   ++  Y
Sbjct: 480 GHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLY 539

Query: 632 NALINGLCRLRRIDQAYGLFIDMEE 656
           N +I G C++ ++ QA  +F+ M+E
Sbjct: 540 NTMICGFCKMEKLVQAQEIFLKMKE 564



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 154/320 (48%)

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           ++ +L  Y   G    A  +FD +     VP++ + N+L+  L + G+   A  + E MI
Sbjct: 189 FDMILKVYAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMI 248

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
             GILPD+ +YTIMVN  CK G +  A  F  EM R   +P+   Y + I G + LGD  
Sbjct: 249 ALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVC 308

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
            A ++   M  KG P +  TY +L+ G CK G +E+A +L   M+      D   Y  +I
Sbjct: 309 GAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLFGCMMEKNLFVDEHVYGVLI 368

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
           HA    G +     + + ML+ GL    V    LI+ +   G +  A      M+   ++
Sbjct: 369 HAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLK 428

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           P+   YN L++G C+     +A+ L  +M  +G+     TY  L+    + G+ + AL +
Sbjct: 429 PDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHI 488

Query: 686 YKEMLDREIEPDYCTHSALL 705
           +  M  R + P+  T+  LL
Sbjct: 489 WNLMHKRGVAPNEVTYCTLL 508



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 97/379 (25%), Positives = 173/379 (45%), Gaps = 29/379 (7%)

Query: 366 DARHRFFEMLRKN--VIPDIISYNTLLY-------------------GYCRSGNIGEAFL 404
           DA   FF++  K     PD+ SY  +++                     C++  I  A  
Sbjct: 113 DASLEFFKLASKQPKFRPDVSSYCKIVHILSRARMYKEVRVYLNELVVLCKNNYIASA-- 170

Query: 405 LFDEL----RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           ++DEL    R  +  PTV  ++ ++      G  + A  + +NM   G +P + +   ++
Sbjct: 171 VWDELVSVYREFSFSPTV--FDMILKVYAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLL 228

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
           +   + G    A   + +M+  G+ PD F+YT  +    K G   EA+   +EM      
Sbjct: 229 SNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCE 288

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           P+++TYN L+ G   LG +  A ++L  M   G   +  TYT +I    + G + +   L
Sbjct: 289 PNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKL 348

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
           F  M+ K L      Y VLIHA+   GR++ A      M   G++ N +  N+LING C+
Sbjct: 349 FGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCK 408

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
           L  +++A  + + M++  + P+ Y Y  L++  C   ++ +A +L  EM ++ +     T
Sbjct: 409 LGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVT 468

Query: 701 HSALLLKQLDKDYKVHAVE 719
           ++ LL       +  HA+ 
Sbjct: 469 YNTLLKNLFHVGHVEHALH 487



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 57/111 (51%)

Query: 197 NKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKE 256
           ++M   G+   V   N ++K L   G    A  ++ +M + G+ P+ VTY T+LD+F K 
Sbjct: 455 DEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKV 514

Query: 257 GEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
           G    A+ +  +   +G + +   YN +I GF +  +L QA+ +   M +L
Sbjct: 515 GTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKEL 565


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 132/435 (30%), Positives = 234/435 (53%)

Query: 260 QEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI 319
           ++A  L +EM      P+ V +  L+T  +     E      + M   G+    +S+  +
Sbjct: 53  EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           I  +     L  AL++  +M+  G  P++ T+  L++G C   R+ DA      M++   
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
            P+++ YNTL+ G C++G +  A  L +E+  + L   VVTYNTL+ GLC  G    A +
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           +  +M+ + I PDV+T+T +++   K GNL  A+E + EM++  + P+   Y + I G  
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
             G   +A +  + M +KG  P+++TYN L+ G CK   ++E  +L ++M  +GF  D  
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
           TY ++IH   ++G LR   D+F  M+ + ++P ++T+ +L+H     G +E A + F +M
Sbjct: 353 TYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDM 412

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
           +       ++ YN +I+GLC+  ++++A+ LF  +  EG+ P+  TYTI+I   C  G  
Sbjct: 413 RESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPR 472

Query: 680 QEALRLYKEMLDREI 694
           +EA  L + M +  I
Sbjct: 473 READELIRRMKEEGI 487



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 124/364 (34%), Positives = 198/364 (54%)

Query: 198  KMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG 257
            KM++ G  P +     ++          +A  +   M  FG  P++V YNT+++  CK  
Sbjct: 664  KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR 723

Query: 258  EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
            ++  ALE+ + M+ +G   + VTYN LI+G S +G    A  L+RDM+K  +  +   + 
Sbjct: 724  DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFT 783

Query: 318  PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
             +I  + ++G L+EA NL +EM+ R V P + TYN LI G C  G + DA++ F  M+ K
Sbjct: 784  ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 843

Query: 378  NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
               PD+++YNTL+ G+C+S  + +   LF E+  + LV    TYNTLI G C+ G L VA
Sbjct: 844  GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVA 903

Query: 438  QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
            Q++   M++ G+ PD++TY I+++  C  G +  A     ++ +  +  D   Y   I G
Sbjct: 904  QKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQG 963

Query: 498  ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
              +     EA+ L   +  KG  PD I Y  ++ GLC+ G   EA++L R+M  DGF+P 
Sbjct: 964  LCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 1023

Query: 558  HITY 561
               Y
Sbjct: 1024 ERIY 1027



 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 128/378 (33%), Positives = 199/378 (52%)

Query: 234  MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
            M + G +PSIVT  ++L+ FC+    QEA+ L+  M G G  PN V YN +I G  +N +
Sbjct: 665  MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 724

Query: 294  LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
            L  A  +   M K G++  A +YN +I G S  G   +A  L  +MV R + P +  +  
Sbjct: 725  LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 784

Query: 354  LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
            LI    K G + +AR+ + EM+R++V+P++ +YN+L+ G+C  G +G+A  +FD + S+ 
Sbjct: 785  LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 844

Query: 414  LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
              P VVTYNTLI G C+   +E   +L   M  QG++ D  TY  +++G C+ G L++A+
Sbjct: 845  CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 904

Query: 474  EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
            + FN M+  G+ PD   Y   +      G   +A  + E++       D+ITYN+++ GL
Sbjct: 905  KVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGL 964

Query: 534  CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
            C+   L+EA  L R +   G  PD I Y ++I      G  R    L   M   G  P+ 
Sbjct: 965  CRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSE 1024

Query: 594  VTYTVLIHAHAARGRLEL 611
              Y   +  H      EL
Sbjct: 1025 RIYDETLRDHYTSLSAEL 1042



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 188/661 (28%), Positives = 301/661 (45%), Gaps = 78/661 (11%)

Query: 97  LNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMH 156
           L+ IR +   AL FF  V +QP     +F       +L  +  LR    V+     + ++
Sbjct: 47  LHSIRFEDAFAL-FFEMVHSQPLPSIVDFT-----RLLTATANLRRYETVIYFSQKMELY 100

Query: 157 GILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK 216
           GI   L               +L+  + + S +   L V  KM++ G  P +     ++ 
Sbjct: 101 GISHDLYS-----------FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLL- 148

Query: 217 VLRDNGFSVKAR-----EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
               +GF +  R      +  +M + G +P++V YNT++D  CK GE+  ALELL EM+ 
Sbjct: 149 ----HGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEK 204

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
           +G   + VTYN L+TG   +G    A  ++RDM+K  +     ++  +I  + ++G L E
Sbjct: 205 KGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDE 264

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
           A  L +EM+   V P   TYN +I GLC  GR+ DA+  F  M  K   P++++YNTL+ 
Sbjct: 265 AQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLIS 324

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
           G+C+   + E   LF  +        + TYNTLI G C+ G L VA  +   M+++ + P
Sbjct: 325 GFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTP 384

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           D+IT+ I+++G C  G +  A   F++M          AY   I G  K     +A+ L 
Sbjct: 385 DIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELF 444

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI------PDHITYTS-- 563
             +  +G  PD  TY +++ GLCK G   EA+EL+R+M  +G I       DH+   S  
Sbjct: 445 CRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNAEDDHLEEHSSS 504

Query: 564 ---------------------------IIHASLEMGDLRRGRDLFNNMLRKGLSPTLV-- 594
                                      I  +S   G +RR   L    L +G +P     
Sbjct: 505 NKEISLSLREIWERSKSNPFWMQRLIPIAFSSSVKGFVRRHYLL----LERGNNPETSLS 560

Query: 595 -TYTVLIHAHAARGRL---------ELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRI 644
            +++   H H  R RL         + AF  F EM      P+++ +  ++  + ++ + 
Sbjct: 561 RSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKF 620

Query: 645 DQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
           D    L+  ME  GI  + Y++TILI+  C       AL L  +M+     P   T  +L
Sbjct: 621 DIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSL 680

Query: 705 L 705
           L
Sbjct: 681 L 681



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 129/439 (29%), Positives = 226/439 (51%)

Query: 258  EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
            +  +A  L  EM      P+ V +  ++T  ++  + +    L   M  LG+    +S+ 
Sbjct: 584  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 643

Query: 318  PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
             +I  +     L  AL L  +M+  G  P++ T   L+ G C+  R  +A      M   
Sbjct: 644  ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 703

Query: 378  NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
              +P+++ YNT++ G C++ ++  A  +F  +  + +    VTYNTLI GL   G    A
Sbjct: 704  GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 763

Query: 438  QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
             +L  +M+ + I P+VI +T +++   K GNL  AR  + EM+R+ + P+ F Y + I G
Sbjct: 764  ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 823

Query: 498  ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
                G   +A  + + M++KG  PD++TYN L+ G CK   +E+  +L  +M   G + D
Sbjct: 824  FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 883

Query: 558  HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
              TY ++IH   + G L   + +FN M+  G+SP +VTY +L+      G++E A +   
Sbjct: 884  AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 943

Query: 618  EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
            ++Q   +  ++ITYN +I GLCR  ++ +A+ LF  +  +G+ P+   Y  +I+  C  G
Sbjct: 944  DLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 1003

Query: 678  NWQEALRLYKEMLDREIEP 696
              +EA +L + M +    P
Sbjct: 1004 LQREADKLCRRMKEDGFMP 1022



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 129/426 (30%), Positives = 217/426 (50%)

Query: 241  PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
            PSIV +  +L    K  +    + L  +M+  G S +  ++ +LI  F R   L  A  L
Sbjct: 602  PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 661

Query: 301  IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
            +  M+KLG + S  +   ++ G+ +     EA++L + M   G  P +  YN +I GLCK
Sbjct: 662  LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 721

Query: 361  WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
               +++A   F+ M +K +  D ++YNTL+ G   SG   +A  L  ++  R + P V+ 
Sbjct: 722  NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 781

Query: 421  YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
            +  LID   + G+L  A+ L + MI + ++P+V TY  ++NG C  G L  A+  F+ M+
Sbjct: 782  FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 841

Query: 481  RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
             KG  PD   Y T I G  K     +  +L  EM  +G   D  TYN L+HG C+ G L 
Sbjct: 842  SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN 901

Query: 541  EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
             A ++  +MV  G  PD +TY  ++      G + +   +  ++ +  +   ++TY ++I
Sbjct: 902  VAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIII 961

Query: 601  HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                   +L+ A+  F  +  KG++P+ I Y  +I+GLCR     +A  L   M+E+G +
Sbjct: 962  QGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFM 1021

Query: 661  PNKYTY 666
            P++  Y
Sbjct: 1022 PSERIY 1027



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 153/551 (27%), Positives = 258/551 (46%), Gaps = 45/551 (8%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           M++  + PDV     +I V    G   +A+E+Y+ M +  + P+ VTYN++++  C  G 
Sbjct: 237 MMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGR 296

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           + +A +    M  +GC PN VTYN LI+GF +   +++   L + M   G      +YN 
Sbjct: 297 LYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNT 356

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           +I GY + G L  AL++   MV+R V P + T+ IL++GLC  G +  A  +F +M    
Sbjct: 357 LIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESE 416

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
               I++YN +++G C++  + +A+ LF  L    + P   TY  +I GLC+ G    A 
Sbjct: 417 KYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREAD 476

Query: 439 QLKENMINQGILPDVITYTIMV---NGSCKMGNLSMAREFFNE----------------- 478
           +L   M  +GI+  +      +   + S K  +LS+ RE +                   
Sbjct: 477 ELIRRMKEEGIICQMNAEDDHLEEHSSSNKEISLSL-REIWERSKSNPFWMQRLIPIAFS 535

Query: 479 ------------MLRKGLQPD------------RFAYTTQIAGELKLGDTSEAYRLQEEM 514
                       +L +G  P+               Y  ++  EL      +A+ L  EM
Sbjct: 536 SSVKGFVRRHYLLLERGNNPETSLSRSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEM 595

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
           L     P ++ +  ++  + K+   +    L  KM   G   D  ++T +IH       L
Sbjct: 596 LQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRL 655

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
                L   M++ G  P++VT   L++      R + A      M   G  PNV+ YN +
Sbjct: 656 SLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTV 715

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           INGLC+ R ++ A  +F  ME++GI  +  TY  LI+   N+G W +A RL ++M+ R+I
Sbjct: 716 INGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKI 775

Query: 695 EPDYCTHSALL 705
           +P+    +AL+
Sbjct: 776 DPNVIFFTALI 786



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 131/439 (29%), Positives = 220/439 (50%), Gaps = 2/439 (0%)

Query: 195  VFNKMLRNGLLPDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
            +F +ML++  +P + +  R++ V+ + N F +    +Y  M   GI   + ++  ++  F
Sbjct: 591  LFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDI-VIYLYHKMENLGISHDLYSFTILIHCF 649

Query: 254  CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
            C+   +  AL LL +M   G  P+ VT   L+ GF +    ++A  L+  M   G   + 
Sbjct: 650  CRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNV 709

Query: 314  HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
              YN +I G  +   L  AL +   M  +G+     TYN LI GL   GR +DA     +
Sbjct: 710  VIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRD 769

Query: 374  MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
            M+++ + P++I +  L+  + + GN+ EA  L+ E+  R++VP V TYN+LI+G C +G 
Sbjct: 770  MVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGC 829

Query: 434  LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
            L  A+ + + M+++G  PDV+TY  ++ G CK   +    + F EM  +GL  D F Y T
Sbjct: 830  LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT 889

Query: 494  QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
             I G  + G  + A ++   M+  G  PD++TYN+L+  LC  G +E+A  ++  +    
Sbjct: 890  LIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSE 949

Query: 554  FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
               D ITY  II        L+    LF ++ RKG+ P  + Y  +I     +G    A 
Sbjct: 950  MDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREAD 1009

Query: 614  MYFSEMQVKGIRPNVITYN 632
                 M+  G  P+   Y+
Sbjct: 1010 KLCRRMKEDGFMPSERIYD 1028



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 119/356 (33%), Positives = 187/356 (52%)

Query: 172  SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
            SI  L  LL  + + +  ++ + + + M   G +P+V   N +I  L  N     A EV+
Sbjct: 673  SIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVF 732

Query: 232  RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
              M + GI+   VTYNT++      G   +A  LL +M  R   PN + +  LI  F + 
Sbjct: 733  YCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKE 792

Query: 292  GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
            G L +AR L ++M++  +  +  +YN +I G+   G L +A  + + MV++G  P + TY
Sbjct: 793  GNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTY 852

Query: 352  NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
            N LI G CK  RV D    F EM  + ++ D  +YNTL++GYC++G +  A  +F+ +  
Sbjct: 853  NTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVD 912

Query: 412  RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
              + P +VTYN L+D LC  G +E A  + E++    +  D+ITY I++ G C+   L  
Sbjct: 913  CGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKE 972

Query: 472  AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
            A   F  + RKG++PD  AY T I+G  + G   EA +L   M   GF P    Y+
Sbjct: 973  AWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 1028


>gi|413934354|gb|AFW68905.1| hypothetical protein ZEAMMB73_510949 [Zea mays]
          Length = 845

 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 159/553 (28%), Positives = 261/553 (47%), Gaps = 44/553 (7%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           S+   + +LL +  + MV     +   M ++G+ PDV + N +IK     G+S  A +++
Sbjct: 217 SLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVCSYNILIKGHCVFGWSRDAFKMF 276

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M   G +P++VTYN ++D  C EG M EA  L  EM   G   N +T+NVLI G++++
Sbjct: 277 EGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQVNTITFNVLIDGYAKS 336

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G+++QA    R+M   GL   + ++N II   + K      L  + +M +  ++      
Sbjct: 337 GQMDQASAAYREMQARGLVPDSCTFN-IIAARAHKFGYAAQLVHDHDMFSSHMSAD--GL 393

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           ++L+  LC   R+ DA       + + V   +  +N L+  Y + G   EA  L+  +  
Sbjct: 394 DMLVCRLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALIAAYSKEGLHEEASELYRIMNK 453

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI-------------------------- 445
             L P+  T+N LI GLC  G L+ AQ L E+M+                          
Sbjct: 454 LGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTSFTICLDAYFRDGNAVGA 513

Query: 446 --------NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
                   N G+  D I ++  +NG C++  ++ A + F EM  +G+ P+   Y + I+ 
Sbjct: 514 LKCWDDMGNIGLQTDFIAFSAYINGLCRLDCVNEAYQAFAEMTSRGIVPNNITYNSIISA 573

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
             K G+ +EA +L + M   G  PD+ T N+L+ GLC+ G L+  + LL  M  +G  PD
Sbjct: 574 LCKAGNMTEALKLVQNMRQSGLVPDIYTSNILIDGLCREGKLKMVDNLLLDMCSNGLTPD 633

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
            +TY +II+A     D+    +  N ML  G  P + TY + +H+      L  A     
Sbjct: 634 TVTYNTIINAYCRAQDMNSAMNFMNKMLVAGCEPDIFTYNIWMHSLCRNHMLNQAGKLLD 693

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
           E+      PN +TYN L++G+C    +D+A  L   + +    PN  T  + ++  C  G
Sbjct: 694 ELVAVDCSPNSVTYNTLMDGICS-DVLDRAMILTGRLIKMAFKPNTITLNVFLSHFCKQG 752

Query: 678 ------NWQEALR 684
                  W E LR
Sbjct: 753 FGNRALMWAEKLR 765



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 167/616 (27%), Positives = 279/616 (45%), Gaps = 69/616 (11%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
           L L L  +    M  + L V  ++ R+G  P +   + ++++L  +G    A  V+  M 
Sbjct: 151 LRLALHAFLAAGMAAEALDVLARVRRSGNTPSLSALSALLRLLFRSGEVRAAWNVFEEMT 210

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELL--------------------------WE- 268
             G +PS+ T+N ML  FC  G ++ A  LL                          W  
Sbjct: 211 AEGPRPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVCSYNILIKGHCVFGWSR 270

Query: 269 --------MQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII 320
                   M   GC P  VTYN+L+      G + +AR L  +M ++G++V+  ++N +I
Sbjct: 271 DAFKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQVNTITFNVLI 330

Query: 321 CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI--------------------------- 353
            GY++ G + +A     EM  RG+ P   T+NI                           
Sbjct: 331 DGYAKSGQMDQASAAYREMQARGLVPDSCTFNIIAARAHKFGYAAQLVHDHDMFSSHMSA 390

Query: 354 -----LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDE 408
                L+  LC   R+ DA       + + V   +  +N L+  Y + G   EA  L+  
Sbjct: 391 DGLDMLVCRLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALIAAYSKEGLHEEASELYRI 450

Query: 409 LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
           +    L P+  T+N LI GLC  G L+ AQ L E+M+++G      ++TI ++   + GN
Sbjct: 451 MNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLST-SFTICLDAYFRDGN 509

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
              A + +++M   GLQ D  A++  I G  +L   +EAY+   EM ++G  P+ ITYN 
Sbjct: 510 AVGALKCWDDMGNIGLQTDFIAFSAYINGLCRLDCVNEAYQAFAEMTSRGIVPNNITYNS 569

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           ++  LCK G++ EA +L++ M   G +PD  T   +I      G L+   +L  +M   G
Sbjct: 570 IISALCKAGNMTEALKLVQNMRQSGLVPDIYTSNILIDGLCREGKLKMVDNLLLDMCSNG 629

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
           L+P  VTY  +I+A+     +  A  + ++M V G  P++ TYN  ++ LCR   ++QA 
Sbjct: 630 LTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVAGCEPDIFTYNIWMHSLCRNHMLNQAG 689

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQ 708
            L  ++      PN  TY  L++  C +     A+ L   ++    +P+  T +  L   
Sbjct: 690 KLLDELVAVDCSPNSVTYNTLMDGIC-SDVLDRAMILTGRLIKMAFKPNTITLNVFLSHF 748

Query: 709 LDKDYKVHAVEYLESL 724
             + +   A+ + E L
Sbjct: 749 CKQGFGNRALMWAEKL 764



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 127/471 (26%), Positives = 208/471 (44%), Gaps = 71/471 (15%)

Query: 171 VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV 230
           V+    ++L+  Y K   ++Q    + +M   GL+PD  +C   I   R + F   A+ V
Sbjct: 321 VNTITFNVLIDGYAKSGQMDQASAAYREMQARGLVPD--SCTFNIIAARAHKFGYAAQLV 378

Query: 231 YR--------------------------------MMG--EFGIKPSIVTYNTMLDSFCKE 256
           +                                 ++G  E G+   +  +N ++ ++ KE
Sbjct: 379 HDHDMFSSHMSADGLDMLVCRLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALIAAYSKE 438

Query: 257 GEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSY 316
           G  +EA EL   M   G +P+  T+N LI G    G L++A+ L+  M+  G  +S  S+
Sbjct: 439 GLHEEASELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLST-SF 497

Query: 317 NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
              +  Y   G  V AL   ++M   G+      ++  I GLC+   V++A   F EM  
Sbjct: 498 TICLDAYFRDGNAVGALKCWDDMGNIGLQTDFIAFSAYINGLCRLDCVNEAYQAFAEMTS 557

Query: 377 KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
           + ++P+ I+YN+++   C++GN+ EA  L   +R   LVP + T N LIDGLCR G L++
Sbjct: 558 RGIVPNNITYNSIISALCKAGNMTEALKLVQNMRQSGLVPDIYTSNILIDGLCREGKLKM 617

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
              L  +M + G+ PD +TY  ++N  C+  +++ A  F N+ML  G +PD F Y   + 
Sbjct: 618 VDNLLLDMCSNGLTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVAGCEPDIFTYNIWMH 677

Query: 497 GELKLGDTSEAYRLQEEMLA----------------------------------KGFPPD 522
              +    ++A +L +E++A                                    F P+
Sbjct: 678 SLCRNHMLNQAGKLLDELVAVDCSPNSVTYNTLMDGICSDVLDRAMILTGRLIKMAFKPN 737

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
            IT NV +   CK G    A     K+  D F+ D  T   I  A  EM D
Sbjct: 738 TITLNVFLSHFCKQGFGNRALMWAEKLREDSFVFDGATRNIIDWARREMED 788


>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
          Length = 621

 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 136/475 (28%), Positives = 235/475 (49%)

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY T+++++C  G++  A + L  +   G +P+   Y   + G+ R G L  A  +   M
Sbjct: 74  TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
              G   +A +Y  ++ G    G++ EA+ +   M     AP    Y  +++GLC+ GR 
Sbjct: 134 PLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRT 193

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            +A     E +     P+I+ YN L+ GYC +G +  A  +F+ +      P V TY  L
Sbjct: 194 EEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTEL 253

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           I GLC+ G +E A  L   M+  G+ P+V+TYT ++ G C  G+L  A    + M   GL
Sbjct: 254 IHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGL 313

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            P+ + ++  I    K     EA      ++ KG   + + Y  L+ GLCK G ++ A+E
Sbjct: 314 VPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADE 373

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           L++KM+ +GF+PD  +Y+S+I        L +   +  +M+ KG+  + VTYT++I    
Sbjct: 374 LMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELV 433

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
                E     F +M   GI P+++TY   +   C   R++ A  + + M + G+ PN  
Sbjct: 434 REVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLV 493

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVE 719
           TY  LI    N G   +A   ++ M+ +  +P+  +++ LL   + K    ++V+
Sbjct: 494 TYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVD 548



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 135/433 (31%), Positives = 218/433 (50%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G+ P    Y + +  +C+ G +  A  +   M  RGC     TY  L+ G    G + +A
Sbjct: 102 GLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREA 161

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             +   M         H Y  ++ G  E G   EA  L EE ++ G  P +  YN LI G
Sbjct: 162 MAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDG 221

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
            C  G +  A   F  M      P++ +Y  L++G C+SG +  A +LF  +    L P 
Sbjct: 222 YCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPN 281

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           VVTY  LI G C  G L+ A +L   M   G++P+  T++++++  CK   +  A+ F  
Sbjct: 282 VVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLG 341

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            +++KG++ +   YT+ I G  K G    A  L ++M+++GF PD  +Y+ L+ GLC+  
Sbjct: 342 SLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQK 401

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            L +A  +L  M+  G     +TYT II   +        + +F+ M+  G++P +VTYT
Sbjct: 402 KLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYT 461

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           V + ++   GR+E A     +M  +G+ PN++TYN LI G   L  + QA+  F  M  +
Sbjct: 462 VFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGK 521

Query: 658 GILPNKYTYTILI 670
           G  PN+ +YT+L+
Sbjct: 522 GWKPNEDSYTVLL 534



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 138/504 (27%), Positives = 237/504 (47%), Gaps = 3/504 (0%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
              +L  GL PD       +      G    A  V+ +M   G   +  TY  +L     
Sbjct: 95  LTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLG 154

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
            G ++EA+ +   M+   C+P+   Y  ++ G    G  E+A  L+ + +  G + +   
Sbjct: 155 AGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVV 214

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           YN +I GY   G +  AL + E M     +P + TY  LI+GLCK G+V  A   F  M+
Sbjct: 215 YNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMV 274

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
              + P++++Y  L+ G C  G++  AF L   + +  LVP   T++ LID LC+   +E
Sbjct: 275 EAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVE 334

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            AQ    +++ +G+  + + YT +++G CK G +  A E   +M+ +G  PD  +Y++ I
Sbjct: 335 EAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLI 394

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
            G  +    S+A  + E+M+ KG     +TY +++  L +    E   ++  KM+  G  
Sbjct: 395 DGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGIN 454

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           PD +TYT  + +  E G +     +   M+ +G+ P LVTY  LI  +A  G +  AF  
Sbjct: 455 PDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFST 514

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY---TYTILINE 672
           F  M  KG +PN  +Y  L+  + +    D +  ++   + + +  + Y    + ILI  
Sbjct: 515 FEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQESNYDEIVWKILIYG 574

Query: 673 NCNAGNWQEALRLYKEMLDREIEP 696
               G+  E   L   M +   +P
Sbjct: 575 LLQKGSVAEFSSLLSVMKEHGYQP 598



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 134/453 (29%), Positives = 231/453 (50%), Gaps = 4/453 (0%)

Query: 188 MVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
           MV + + VF  M  +   PD      ++  L + G + +A  +       G +P+IV YN
Sbjct: 157 MVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYN 216

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
            ++D +C  GEM+ AL++   M G  CSPN  TY  LI G  ++G++E+A  L   M++ 
Sbjct: 217 ALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEA 276

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           GL+ +  +Y  +I G   +G L  A  L   M T G+ P   T+++LI  LCK  +V +A
Sbjct: 277 GLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEA 336

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
           +     +++K V  + + Y +L+ G C++G I  A  L  ++ S   VP   +Y++LIDG
Sbjct: 337 QLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDG 396

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           LCR   L  A  + E+M+ +GI    +TYTI+++   +       ++ F++M+  G+ PD
Sbjct: 397 LCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPD 456

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              YT  +    + G   +A  +  +M+ +G  P+L+TYN L+ G   LG + +A     
Sbjct: 457 IVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFE 516

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT---LVTYTVLIHAHA 604
            MVG G+ P+  +YT ++   ++        D++     K L  +    + + +LI+   
Sbjct: 517 VMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQESNYDEIVWKILIYGLL 576

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
            +G +       S M+  G +P+  T NA+I G
Sbjct: 577 QKGSVAEFSSLLSVMKEHGYQPSN-TINAMITG 608



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 138/509 (27%), Positives = 231/509 (45%), Gaps = 3/509 (0%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
            +L Y +  M+     VF  M   G L        ++  L   G   +A  V+  M    
Sbjct: 113 FVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADS 172

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
             P    Y TM+   C+ G  +EA  LL E    G  PN V YN LI G+   GE+E A 
Sbjct: 173 CAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHAL 232

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            +   M       +  +Y  +I G  + G +  A+ L   MV  G+ P + TY  LI G 
Sbjct: 233 KVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQ 292

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C  G +  A      M    ++P+  +++ L+   C+   + EA L    L  + +    
Sbjct: 293 CNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNE 352

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           V Y +LIDGLC+ G ++ A +L + MI++G +PD  +Y+ +++G C+   LS A     +
Sbjct: 353 VVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLED 412

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M+ KG+Q     YT  I   ++   +    ++ ++M+A G  PD++TY V V   C+ G 
Sbjct: 413 MMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGR 472

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           +E+A  ++ +MV  G  P+ +TY ++I     +G + +    F  M+ KG  P   +YTV
Sbjct: 473 MEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTV 532

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRP---NVITYNALINGLCRLRRIDQAYGLFIDME 655
           L+     +   + +   +    +K ++    + I +  LI GL +   + +   L   M+
Sbjct: 533 LLRLVVKKSSSDNSVDIWKIADMKDLQESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMK 592

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALR 684
           E G  P+     ++  E       QE  R
Sbjct: 593 EHGYQPSNTINAMITGEITVTNEVQEIAR 621



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/466 (25%), Positives = 221/466 (47%), Gaps = 28/466 (6%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVV----------ETVVCVNM-HGILDV------ 161
           G  R  F +  +L  L+ +G++R A  V           +T V   M HG+ +       
Sbjct: 137 GCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEA 196

Query: 162 ------LIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRII 215
                  +  G     +I + + L+  Y     +E  L VF  M  N   P+V+    +I
Sbjct: 197 EVLLEEAMSNGFEP--NIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELI 254

Query: 216 KVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCS 275
             L  +G   +A  ++  M E G++P++VTY  ++   C EG +Q A  LL  M+  G  
Sbjct: 255 HGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLV 314

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           PN  T++VLI    +  ++E+A+  +  ++K G+KV+   Y  +I G  + G +  A  L
Sbjct: 315 PNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADEL 374

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
            ++M++ G  P   +Y+ LI GLC+  ++S A     +M+ K +    ++Y  ++    R
Sbjct: 375 MQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVR 434

Query: 396 SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
                    +FD++ +  + P +VTY   +   C  G +E A+ +   M+++G+ P+++T
Sbjct: 435 EVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVT 494

Query: 456 YTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML 515
           Y  ++ G   +G +S A   F  M+ KG +P+  +YT  +   +K   +  +  + +   
Sbjct: 495 YNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIAD 554

Query: 516 AKGFPP---DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
            K       D I + +L++GL + GS+ E + LL  M   G+ P +
Sbjct: 555 MKDLQESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPSN 600



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 146/311 (46%), Gaps = 6/311 (1%)

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
           +P +   NTL+  L R+      + L   M  +    ++ TYT ++N  C  G++  A++
Sbjct: 38  LPPLRCLNTLLMALARHRMFPDMESLASRMPAR----NLRTYTTLINAYCLAGDIPAAKQ 93

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
               +L  GL PD +AYT+ + G  + G  + A R+   M  +G      TY  L+HGL 
Sbjct: 94  HLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLL 153

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
             G + EA  +   M  D   PD   Y +++H   E G       L    +  G  P +V
Sbjct: 154 GAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIV 213

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
            Y  LI  +   G +E A   F  M      PNV TY  LI+GLC+  ++++A  LF  M
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRM 273

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYK 714
            E G+ PN  TYT LI   CN G+ Q A RL   M    + P+  T S +L+  L K  K
Sbjct: 274 VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFS-VLIDALCKREK 332

Query: 715 VHAVE-YLESL 724
           V   + +L SL
Sbjct: 333 VEEAQLFLGSL 343


>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 154/542 (28%), Positives = 275/542 (50%), Gaps = 18/542 (3%)

Query: 78  WVSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIES 137
           W    F     +P  L R L      P + LR++ W+       RD  V   +   L+ S
Sbjct: 55  WSKLGFHVKDINPNELFRQLISSELNPDLCLRYYTWLVKN----RDISVSLELTFKLLHS 110

Query: 138 GLLRSAYWVVETVVCV--------NMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMV 189
                 Y  + + +           +H I    I    + CV+  I D+L+L Y   S  
Sbjct: 111 LANAKRYSKIRSFLDGFVRNGSDHQVHSIFHA-ISMCDNVCVNSIIADMLVLAYANNSRF 169

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           E     F +    G      +C  ++  L     S     +Y+ M    I+P++ T+N +
Sbjct: 170 ELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVV 229

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR---NGELEQARGLIRDMLK 306
           +++ CK G+M +A +++ +M+  G SPN V+YN LI G+ +   NG++ +A  ++++M++
Sbjct: 230 INALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVE 289

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
             +  +  ++N +I G+ +   L  +L + +EM+ + V P + TYN LI GLC  G++++
Sbjct: 290 NEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINE 349

Query: 367 ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
           A     +M+   V P++I+Y++L+ G+C++G + EA  +FD ++ +   PT   YN LID
Sbjct: 350 AIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLID 409

Query: 427 GLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
             C+ G ++    LKE M  +GI+PDV TY  ++ G C+ GN+  A++ F+++  KGL P
Sbjct: 410 AYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-P 468

Query: 487 DRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
           D   +   + G    G++ +A  L +EM   G  P  +TYN+++ G CK G+L+ A  + 
Sbjct: 469 DLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMR 528

Query: 547 RKMVGDGFIPDHI-TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
            +M  +  +  ++ +Y  ++    + G L     L N ML KGL P  +TY ++      
Sbjct: 529 TQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVD 588

Query: 606 RG 607
           +G
Sbjct: 589 KG 590



 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 141/526 (26%), Positives = 262/526 (49%), Gaps = 11/526 (2%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIK-VLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
           +F +++ + L PD+  C R    ++++   SV     ++++             + LD F
Sbjct: 70  LFRQLISSELNPDL--CLRYYTWLVKNRDISVSLELTFKLLHSLANAKRYSKIRSFLDGF 127

Query: 254 CKEGEMQEALELLW--EMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKV 311
            + G   +   +     M    C  N +  ++L+  ++ N   E      +     G K+
Sbjct: 128 VRNGSDHQVHSIFHAISMCDNVCV-NSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKL 186

Query: 312 SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRF 371
           SA S  P++    ++    +   L +EM+ R + P + T+N++I  LCK G+++ AR   
Sbjct: 187 SAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVM 246

Query: 372 FEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF---LLFDELRSRNLVPTVVTYNTLIDGL 428
            +M      P+++SYNTL+ GYC+ G  G+ +    +  E+    + P + T+N LIDG 
Sbjct: 247 EDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGF 306

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
            +  +L  + ++ + M++Q ++P+VITY  ++NG C  G ++ A    ++M+  G+QP+ 
Sbjct: 307 WKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNL 366

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             Y + I G  K G   EA  + + +  +G  P    YN+L+   CKLG +++   L  +
Sbjct: 367 ITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEE 426

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M  +G +PD  TY  +I      G++   + LF+ +  KGL P LVT+ +L+  + +RG 
Sbjct: 427 MEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGE 485

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP-NKYTYT 667
              A M   EM   G++P  +TYN ++ G C+   +  A  +   ME+E  L  N  +Y 
Sbjct: 486 SRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYN 545

Query: 668 ILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDY 713
           +L+      G  ++A  L  EML++ + P+  T+  +  + +DK +
Sbjct: 546 VLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDKGF 591



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 128/413 (30%), Positives = 200/413 (48%), Gaps = 62/413 (15%)

Query: 169 SCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR 228
           S +S K L + LL   + + VE    ++ +M+R  + P+V   N +I  L   G   KAR
Sbjct: 187 SAMSCKPLMVALLKQNRSADVE---YLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKAR 243

Query: 229 EVYRMMGEFGIKPSIVTYNTMLDSFCK---EGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           +V   M  +G  P++V+YNT++D +CK    G+M +A  +L EM     SPN  T+N+LI
Sbjct: 244 DVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILI 303

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            GF ++  L  +  + ++ML   +  +  +YN +I G    G + EA+ + ++MV+ GV 
Sbjct: 304 DGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQ 363

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P L TY+ LI G CK G + +A   F  +  +   P    YN L+  YC+ G I + F L
Sbjct: 364 PNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFAL 423

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
            +E+    +VP V TYN LI GLCR G++E A++L + + N+G LPD++T+ I++ G C 
Sbjct: 424 KEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKG-LPDLVTFHILMEGYCS 482

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYT-------------------TQIAGELKLGDTSE 506
            G    A     EM + GL+P    Y                    TQ+  E +L     
Sbjct: 483 RGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVA 542

Query: 507 AYRL------------------------------------QEEMLAKGFPPDL 523
           +Y +                                    +EEM+ KGF PD+
Sbjct: 543 SYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDKGFVPDI 595



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 133/261 (50%), Gaps = 16/261 (6%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           GV+ +   + +++    ++G+++ A  + ++V               G  +  + ++ ++
Sbjct: 361 GVQPNLITYHSLINGFCKNGMMKEALDMFDSV--------------KGQGTRPTTRMYNM 406

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  Y K   ++    +  +M R G++PDV   N +I  L  NG    A++++  +   G
Sbjct: 407 LIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKG 466

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           + P +VT++ +++ +C  GE ++A  LL EM   G  P  +TYN+++ G+ + G L+ A 
Sbjct: 467 L-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAAT 525

Query: 299 GLIRDMLK-LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
            +   M K   L+++  SYN ++ GYS+KG L +A  L  EM+ +G+ P   TY I+   
Sbjct: 526 NMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEE 585

Query: 358 LCKWGRVSDARHRFFEMLRKN 378
           +   G V D     F +  K+
Sbjct: 586 MVDKGFVPDIEGHLFNVSTKS 606


>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
 gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g64583, mitochondrial; Flags: Precursor
 gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
          Length = 512

 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 132/435 (30%), Positives = 234/435 (53%)

Query: 260 QEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI 319
           ++A  L +EM      P+ V +  L+T  +     E      + M   G+    +S+  +
Sbjct: 53  EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           I  +     L  AL++  +M+  G  P++ T+  L++G C   R+ DA      M++   
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
            P+++ YNTL+ G C++G +  A  L +E+  + L   VVTYNTL+ GLC  G    A +
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           +  +M+ + I PDV+T+T +++   K GNL  A+E + EM++  + P+   Y + I G  
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
             G   +A +  + M +KG  P+++TYN L+ G CK   ++E  +L ++M  +GF  D  
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
           TY ++IH   ++G LR   D+F  M+ + ++P ++T+ +L+H     G +E A + F +M
Sbjct: 353 TYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDM 412

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
           +       ++ YN +I+GLC+  ++++A+ LF  +  EG+ P+  TYTI+I   C  G  
Sbjct: 413 RESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPR 472

Query: 680 QEALRLYKEMLDREI 694
           +EA  L + M +  I
Sbjct: 473 READELIRRMKEEGI 487



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 133/420 (31%), Positives = 218/420 (51%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PSIV +  +L +       +  +    +M+  G S +  ++ +LI  F R   L  A  +
Sbjct: 69  PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  M+KLG + S  ++  ++ G+     + +A +L   MV  G  P +  YN LI GLCK
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK 188

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G ++ A     EM +K +  D+++YNTLL G C SG   +A  +  ++  R++ P VVT
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           +  LID   + G+L+ AQ+L + MI   + P+ +TY  ++NG C  G L  A++ F+ M 
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMA 308

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            KG  P+   Y T I+G  K     E  +L + M  +GF  D+ TYN L+HG C++G L 
Sbjct: 309 SKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLR 368

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
            A ++   MV     PD IT+  ++H     G++      F++M        +V Y ++I
Sbjct: 369 VALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMI 428

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
           H      ++E A+  F  + V+G++P+  TY  +I GLC+     +A  L   M+EEGI+
Sbjct: 429 HGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 145/464 (31%), Positives = 231/464 (49%), Gaps = 27/464 (5%)

Query: 97  LNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMH 156
           L+ IR +   AL FF  V +QP     +F       +L  +  LR    V+     + ++
Sbjct: 47  LHSIRFEDAFAL-FFEMVHSQPLPSIVDFT-----RLLTATANLRRYETVIYFSQKMELY 100

Query: 157 GILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK 216
           GI   L               +L+  + + S +   L V  KM++ G  P +     ++ 
Sbjct: 101 GISHDLYS-----------FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLL- 148

Query: 217 VLRDNGFSVKAR-----EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
               +GF +  R      +  +M + G +P++V YNT++D  CK GE+  ALELL EM+ 
Sbjct: 149 ----HGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEK 204

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
           +G   + VTYN L+TG   +G    A  ++RDM+K  +     ++  +I  + ++G L E
Sbjct: 205 KGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDE 264

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
           A  L +EM+   V P   TYN +I GLC  GR+ DA+  F  M  K   P++++YNTL+ 
Sbjct: 265 AQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLIS 324

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
           G+C+   + E   LF  +        + TYNTLI G C+ G L VA  +   M+++ + P
Sbjct: 325 GFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTP 384

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           D+IT+ I+++G C  G +  A   F++M          AY   I G  K     +A+ L 
Sbjct: 385 DIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELF 444

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
             +  +G  PD  TY +++ GLCK G   EA+EL+R+M  +G I
Sbjct: 445 CRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 114/363 (31%), Positives = 190/363 (52%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A  V   M + G +PSIVT+ ++L  FC    + +A  L+  M   G  PN V YN LI 
Sbjct: 125 ALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLID 184

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G  +NGEL  A  L+ +M K GL     +YN ++ G    G   +A  +  +M+ R + P
Sbjct: 185 GLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINP 244

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
            + T+  LI    K G + +A+  + EM++ +V P+ ++YN+++ G C  G + +A   F
Sbjct: 245 DVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTF 304

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
           D + S+   P VVTYNTLI G C++  ++   +L + M  +G   D+ TY  +++G C++
Sbjct: 305 DLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQV 364

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G L +A + F  M+ + + PD   +   + G    G+   A    ++M        ++ Y
Sbjct: 365 GKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAY 424

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           N+++HGLCK   +E+A EL  ++  +G  PD  TYT +I    + G  R   +L   M  
Sbjct: 425 NIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKE 484

Query: 587 KGL 589
           +G+
Sbjct: 485 EGI 487


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 140/461 (30%), Positives = 237/461 (51%), Gaps = 1/461 (0%)

Query: 168 SSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKA 227
           +S    ++ ++++  Y +   +   +  FN+M+ NG +P   NC   +        S   
Sbjct: 89  TSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPG-SNCFNYLLTFVVGSSSFNQ 147

Query: 228 REVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITG 287
              +    +  +   + ++  ++   C+ GE++++ +LL E+   G SPN V Y  LI G
Sbjct: 148 WWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDG 207

Query: 288 FSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPT 347
             + GE+E+A+ L  +M KLGL  +  +Y  +I G  + G+  +   + E+M   GV P 
Sbjct: 208 CCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPN 267

Query: 348 LATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFD 407
           L TYN ++  LCK GR  DA   F EM  + V  +I++YNTL+ G CR   + EA  + D
Sbjct: 268 LYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVD 327

Query: 408 ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG 467
           +++S  + P ++TYNTLIDG C  G L  A  L  ++ ++G+ P ++TY I+V+G C+ G
Sbjct: 328 QMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKG 387

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
           + S A +   EM  +G++P +  YT  I    +  +  +A +L+  M   G  PD+ TY+
Sbjct: 388 DTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYS 447

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
           VL+HG C  G + EA+ L + MV     P+ + Y ++I    + G   R   L   M  K
Sbjct: 448 VLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEK 507

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
            L+P + +Y  +I       + + A     +M   GI P+ 
Sbjct: 508 ELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPST 548



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 128/409 (31%), Positives = 218/409 (53%), Gaps = 1/409 (0%)

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           Y  II  Y +   L  +++   EMV  G  P    +N L+  +       +    FF   
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSF-NQWWSFFNEN 155

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
           +  V+ D+ S+  L+ G C +G I ++F L  EL      P VV Y TLIDG C+ G++E
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            A+ L   M   G++ +  TYT+++NG  K G      E + +M   G+ P+ + Y   +
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
               K G T +A+++ +EM  +G   +++TYN L+ GLC+   L EAN+++ +M  DG  
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           P+ ITY ++I     +G L +   L  ++  +GLSP+LVTY +L+     +G    A   
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
             EM+ +GI+P+ +TY  LI+   R   +++A  L + MEE G++P+ +TY++LI+  C 
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 455

Query: 676 AGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
            G   EA RL+K M+++  EP+   ++ ++L    +     A++ L+ +
Sbjct: 456 KGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEM 504



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 133/427 (31%), Positives = 224/427 (52%), Gaps = 1/427 (0%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
            + LL      S   Q    FN+  ++ ++ DV +   +IK   + G   K+ ++   + 
Sbjct: 132 FNYLLTFVVGSSSFNQWWSFFNEN-KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELT 190

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
           EFG  P++V Y T++D  CK+GE+++A +L +EM   G   N  TY VLI G  +NG  +
Sbjct: 191 EFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKK 250

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
           Q   +   M + G+  + ++YN ++    + G   +A  + +EM  RGV+  + TYN LI
Sbjct: 251 QGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLI 310

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
            GLC+  ++++A     +M    + P++I+YNTL+ G+C  G +G+A  L  +L+SR L 
Sbjct: 311 GGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLS 370

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P++VTYN L+ G CR GD   A ++ + M  +GI P  +TYTI+++   +  N+  A + 
Sbjct: 371 PSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQL 430

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
              M   GL PD   Y+  I G    G  +EA RL + M+ K   P+ + YN ++ G CK
Sbjct: 431 RLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCK 490

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
            GS   A +LL++M      P+  +Y  +I    +    +    L   M+  G+ P+   
Sbjct: 491 EGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSI 550

Query: 596 YTVLIHA 602
            +++  A
Sbjct: 551 LSLISRA 557



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 124/452 (27%), Positives = 227/452 (50%), Gaps = 1/452 (0%)

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           Y  +++S+ +   +  ++    EM   G  P    +N L+T    +    Q      +  
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN- 155

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
           K  + +  +S+  +I G  E G + ++ +L  E+   G +P +  Y  LI G CK G + 
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
            A+  FFEM +  ++ +  +Y  L+ G  ++G   + F ++++++   + P + TYN ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           + LC+ G  + A Q+ + M  +G+  +++TY  ++ G C+   L+ A +  ++M   G+ 
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           P+   Y T I G   +G   +A  L  ++ ++G  P L+TYN+LV G C+ G    A ++
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
           +++M   G  P  +TYT +I       ++ +   L  +M   GL P + TY+VLIH    
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 455

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
           +G++  A   F  M  K   PN + YN +I G C+     +A  L  +MEE+ + PN  +
Sbjct: 456 KGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVAS 515

Query: 666 YTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           Y  +I   C     +EA RL ++M+D  I+P 
Sbjct: 516 YRYMIEVLCKERKSKEAERLVEKMIDSGIDPS 547



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 129/444 (29%), Positives = 214/444 (48%), Gaps = 8/444 (1%)

Query: 281 YNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN---PIICGYSEKGLLVEALNLEE 337
           Y V+I  + ++  L  +     +M+  G    ++ +N     + G S         N  +
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
             V   V     ++ ILI G C+ G +  +     E+      P+++ Y TL+ G C+ G
Sbjct: 157 SKVVLDVY----SFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKG 212

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
            I +A  LF E+    LV    TY  LI+GL + G  +   ++ E M   G+ P++ TY 
Sbjct: 213 EIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYN 272

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
            ++N  CK G    A + F+EM  +G+  +   Y T I G  +    +EA ++ ++M + 
Sbjct: 273 CVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSD 332

Query: 518 GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
           G  P+LITYN L+ G C +G L +A  L R +   G  P  +TY  ++      GD    
Sbjct: 333 GINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGA 392

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
             +   M  +G+ P+ VTYT+LI   A    +E A      M+  G+ P+V TY+ LI+G
Sbjct: 393 AKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHG 452

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
            C   ++++A  LF  M E+   PN+  Y  +I   C  G+   AL+L KEM ++E+ P+
Sbjct: 453 FCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPN 512

Query: 698 YCTHSALLLKQLDKDYKVHAVEYL 721
             ++   +++ L K+ K    E L
Sbjct: 513 VASYR-YMIEVLCKERKSKEAERL 535



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 9/201 (4%)

Query: 163 IGGGLSSCVSIK---------ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNR 213
           +G  LS C  +K           ++L+  + +K        +  +M   G+ P       
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTI 413

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
           +I     +    KA ++   M E G+ P + TY+ ++  FC +G+M EA  L   M  + 
Sbjct: 414 LIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKN 473

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
           C PN V YN +I G+ + G   +A  L+++M +  L  +  SY  +I    ++    EA 
Sbjct: 474 CEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAE 533

Query: 334 NLEEEMVTRGVAPTLATYNIL 354
            L E+M+  G+ P+ +  +++
Sbjct: 534 RLVEKMIDSGIDPSTSILSLI 554


>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 148/496 (29%), Positives = 245/496 (49%), Gaps = 23/496 (4%)

Query: 188 MVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
           M+E+    F KM +  + P  ++CN ++  L   G    +R+ ++ MG  GIK S+ TYN
Sbjct: 1   MLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYN 60

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
            M+D  CKEG+++ A  L  +M+  G +P+ VTYN LI G  + G L++   +   M   
Sbjct: 61  IMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDA 120

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
                  +YN +I  + +   + +A     EM   G+ P + TY+  I   CK G + +A
Sbjct: 121 DCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEA 180

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
              F +M R  + P+  +Y +L+   C++GN+ EA  L +E+    +   VVTY  L+DG
Sbjct: 181 IKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDG 240

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           LC  G ++ A+++   M+N G+ P+  TYT +V+G  K   +  A++   EM  K ++PD
Sbjct: 241 LCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPD 300

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV------------------- 528
              Y T + G        EA  L  E+   G   + + Y                     
Sbjct: 301 LLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLE 360

Query: 529 ----LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM 584
               LV GLCK    E A +L  +M+  G +PD I YT++I  +++ G+L+   +L + M
Sbjct: 361 EMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRM 420

Query: 585 LRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRI 644
           +  G+   L  YT LI   +  G+++ A     EM  KG+ P+ + Y  LI     L ++
Sbjct: 421 IEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKV 480

Query: 645 DQAYGLFIDMEEEGIL 660
           D+A  L  +M + G++
Sbjct: 481 DEALELQNEMAKRGMI 496



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 152/515 (29%), Positives = 255/515 (49%), Gaps = 29/515 (5%)

Query: 86  VVSDPELLVRVLNRIREKPR--IALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSA 143
           V   P     +L+R+ +  R  ++ +FF+ +    G+KR  F +  +++ L + G L  A
Sbjct: 17  VFPKPRSCNALLHRLSKVGRGDLSRKFFKDM-GAAGIKRSVFTYNIMIDYLCKEGDLEMA 75

Query: 144 YWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNG 203
                         +   +   G +    I   + L+  + K  ++++C+ +F +M    
Sbjct: 76  ------------RSLFTQMKEAGFTP--DIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121

Query: 204 LLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEAL 263
             PDV   N +I          KA E    M   G+KP++VTY+T +D+FCKEG +QEA+
Sbjct: 122 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI 181

Query: 264 ELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGY 323
           +   +M+    +PN  TY  LI    + G L +A  L+ ++L+ G+K++  +Y  ++ G 
Sbjct: 182 KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL 241

Query: 324 SEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
            E+G + EA  +   M+  GVAP   TY  L++G  K   +  A+    EM  K + PD+
Sbjct: 242 CEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDL 301

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
           + Y T+L+G C    + EA LL  E++   +    V Y TL+D   + G    A  L E 
Sbjct: 302 LLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEE 361

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           M++            +V+G CK     +A++ F+EML KG+ PD+ AYT  I G +K G+
Sbjct: 362 MLD------------LVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGN 409

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
             EA  L++ M+  G   DL  Y  L+ GL   G +++A  LL +M+G G +PD + Y  
Sbjct: 410 LQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMC 469

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           +I     +G +    +L N M ++G+   L  + V
Sbjct: 470 LIKKYYALGKVDEALELQNEMAKRGMITGLSDHAV 504



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 151/490 (30%), Positives = 238/490 (48%), Gaps = 23/490 (4%)

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           +A E +  M +F + P   + N +L    K G    + +   +M   G   +  TYN++I
Sbjct: 4   EASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMI 63

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
               + G+LE AR L   M + G      +YN +I G+ + GLL E + + E+M      
Sbjct: 64  DYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCD 123

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P + TYN LI   CK+ R+  A     EM    + P++++Y+T +  +C+ G + EA   
Sbjct: 124 PDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKF 183

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
           F ++R   L P   TY +LID  C+ G+L  A +L E ++  GI  +V+TYT +++G C+
Sbjct: 184 FVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCE 243

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
            G +  A E F  ML  G+ P++  YT  + G +K  +   A  + +EM  K   PDL+ 
Sbjct: 244 EGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLL 303

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL-------------EMG 572
           Y  ++ GLC    LEEA  L+ ++   G   + + YT+++ A               EM 
Sbjct: 304 YGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEML 363

Query: 573 DLRRG----------RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
           DL  G          + LF+ ML KG+ P  + YT LI  +   G L+ A      M   
Sbjct: 364 DLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEI 423

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
           G+  ++  Y ALI GL    ++ +A  L  +M  +G+LP++  Y  LI +    G   EA
Sbjct: 424 GMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEA 483

Query: 683 LRLYKEMLDR 692
           L L  EM  R
Sbjct: 484 LELQNEMAKR 493



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 134/435 (30%), Positives = 225/435 (51%), Gaps = 23/435 (5%)

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           LE+A      M K  +     S N ++   S+ G    +    ++M   G+  ++ TYNI
Sbjct: 2   LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 61

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           +I  LCK G +  AR  F +M      PDI++YN+L+ G+ + G + E   +F++++  +
Sbjct: 62  MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
             P V+TYN LI+  C++  +  A +    M   G+ P+V+TY+  ++  CK G L  A 
Sbjct: 122 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI 181

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
           +FF +M R  L P+ F YT+ I    K G+ +EA +L EE+L  G   +++TY  L+ GL
Sbjct: 182 KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL 241

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
           C+ G ++EA E+ R M+  G  P+  TYT+++H  ++  ++   +D+   M  K + P L
Sbjct: 242 CEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDL 301

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA-------------------- 633
           + Y  ++       RLE A +   E++  GI  N + Y                      
Sbjct: 302 LLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEE 361

Query: 634 ---LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
              L++GLC+    + A  LF +M ++G++P+K  YT LI+ N   GN QEAL L   M+
Sbjct: 362 MLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMI 421

Query: 691 DREIEPDYCTHSALL 705
           +  +E D   ++AL+
Sbjct: 422 EIGMELDLHAYTALI 436


>gi|414871052|tpg|DAA49609.1| TPA: hypothetical protein ZEAMMB73_878928 [Zea mays]
          Length = 807

 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 163/559 (29%), Positives = 274/559 (49%), Gaps = 8/559 (1%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           + D L   Y +  M    L V +KM    +   +   + ++  LR    ++    +++ M
Sbjct: 149 VWDALANSYARAQMNHDALYVLSKMNSLNMQISITTYDSLLYSLRKADVALA---IFKEM 205

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG-CSPNGVTYNVLITGFSRNGE 293
              GI PS  ++  ++D  CK+G++ EAL  L E +  G   P G+T+N L++     G 
Sbjct: 206 ESCGIPPSDYSHGILIDGLCKQGKIGEALSFLQETRKEGKFKPLGMTFNTLMSALCNWGF 265

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           ++ A+ +   MLK GL  S H+Y+ II G  + G + EA ++ + +   G+   + T N 
Sbjct: 266 IQDAKSVFCLMLKYGLNPSRHTYSTIIHGLCKVGSVNEAFDIFQSVTEEGMELDIVTCNS 325

Query: 354 LIYGLCKWGRVSDARHRFFEMLRK-NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
           LI G    G   +   +  EM+R   V PD+++Y  L+ G+C  G++ E   +  ++  +
Sbjct: 326 LINGFRLHGHTREIP-KMIEMMRGLGVEPDVVTYTILITGHCEGGDVEEGMRIRKDILGQ 384

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
            +   +VTY+ LI+ L + G     + L   + + G+  DVI Y+I+++G CK+G +  A
Sbjct: 385 GIELNIVTYSVLINALFKKGLFYEVENLFGEICSIGLELDVIAYSILIHGFCKLGEIGRA 444

Query: 473 REFFNEML-RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
            + +N M   + + P    + + + G  K G   EA    E + +K  P D++ YNV++ 
Sbjct: 445 LQVWNLMCCSQRVIPTSVNHVSILLGLCKKGFLDEARSYLETVASKYQPSDVVLYNVVID 504

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           G  K+G +  A +L   ++  G  P  +T  S+++   + GDL      F  +    L P
Sbjct: 505 GYAKVGDIGNAVQLYDAIIMAGMCPTIVTCNSLLYGYCKFGDLHMAESYFMAIQLSDLLP 564

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
           T VTYT L+ A +  G++      F EM  KGIRPN ITY+ +I GLC+      A  + 
Sbjct: 565 TTVTYTTLMDALSEAGKVHSMLSIFKEMTGKGIRPNAITYSVVIKGLCKQLMFHDAKNVL 624

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDK 711
            DM  EG   +   Y  LI   C   + + A  +Y+ M+ R + P   T++ L+     K
Sbjct: 625 DDMYREGFDADPIPYNTLIQGFCETQDAKNAFYVYELMVCRGVMPSPVTYNLLVNVLCLK 684

Query: 712 DYKVHAVEYLESL-TLGAE 729
              +HA   LES    GAE
Sbjct: 685 GLVIHAEMKLESFRKQGAE 703



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 149/504 (29%), Positives = 251/504 (49%), Gaps = 1/504 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           VF  ML+ GL P     + II  L   G   +A ++++ + E G++  IVT N++++ F 
Sbjct: 272 VFCLMLKYGLNPSRHTYSTIIHGLCKVGSVNEAFDIFQSVTEEGMELDIVTCNSLINGFR 331

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
             G  +E  +++  M+G G  P+ VTY +LITG    G++E+   + +D+L  G++++  
Sbjct: 332 LHGHTREIPKMIEMMRGLGVEPDVVTYTILITGHCEGGDVEEGMRIRKDILGQGIELNIV 391

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +Y+ +I    +KGL  E  NL  E+ + G+   +  Y+ILI+G CK G +  A   +  M
Sbjct: 392 TYSVLINALFKKGLFYEVENLFGEICSIGLELDVIAYSILIHGFCKLGEIGRALQVWNLM 451

Query: 375 L-RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
              + VIP  +++ ++L G C+ G + EA    + + S+     VV YN +IDG  + GD
Sbjct: 452 CCSQRVIPTSVNHVSILLGLCKKGFLDEARSYLETVASKYQPSDVVLYNVVIDGYAKVGD 511

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           +  A QL + +I  G+ P ++T   ++ G CK G+L MA  +F  +    L P    YTT
Sbjct: 512 IGNAVQLYDAIIMAGMCPTIVTCNSLLYGYCKFGDLHMAESYFMAIQLSDLLPTTVTYTT 571

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            +    + G       + +EM  KG  P+ ITY+V++ GLCK     +A  +L  M  +G
Sbjct: 572 LMDALSEAGKVHSMLSIFKEMTGKGIRPNAITYSVVIKGLCKQLMFHDAKNVLDDMYREG 631

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
           F  D I Y ++I    E  D +    ++  M+ +G+ P+ VTY +L++    +G +  A 
Sbjct: 632 FDADPIPYNTLIQGFCETQDAKNAFYVYELMVCRGVMPSPVTYNLLVNVLCLKGLVIHAE 691

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
           M     + +G       Y  LI   C      +A      + + G   +   ++  IN  
Sbjct: 692 MKLESFRKQGAELRKFAYTTLIKAQCAKGMPYKAIMWVGKLLDAGFEASIEDFSAAINRL 751

Query: 674 CNAGNWQEALRLYKEMLDREIEPD 697
           C     +EAL L   ML   + PD
Sbjct: 752 CKRQFTREALMLISIMLSVGVYPD 775



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 132/486 (27%), Positives = 240/486 (49%), Gaps = 1/486 (0%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   V +   +F  +   G+  D+  CN +I   R +G + +  ++  MM   G++P +V
Sbjct: 297 KVGSVNEAFDIFQSVTEEGMELDIVTCNSLINGFRLHGHTREIPKMIEMMRGLGVEPDVV 356

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY  ++   C+ G+++E + +  ++ G+G   N VTY+VLI    + G   +   L  ++
Sbjct: 357 TYTILITGHCEGGDVEEGMRIRKDILGQGIELNIVTYSVLINALFKKGLFYEVENLFGEI 416

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV-TRGVAPTLATYNILIYGLCKWGR 363
             +GL++   +Y+ +I G+ + G +  AL +   M  ++ V PT   +  ++ GLCK G 
Sbjct: 417 CSIGLELDVIAYSILIHGFCKLGEIGRALQVWNLMCCSQRVIPTSVNHVSILLGLCKKGF 476

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           + +AR     +  K    D++ YN ++ GY + G+IG A  L+D +    + PT+VT N+
Sbjct: 477 LDEARSYLETVASKYQPSDVVLYNVVIDGYAKVGDIGNAVQLYDAIIMAGMCPTIVTCNS 536

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           L+ G C++GDL +A+     +    +LP  +TYT +++   + G +      F EM  KG
Sbjct: 537 LLYGYCKFGDLHMAESYFMAIQLSDLLPTTVTYTTLMDALSEAGKVHSMLSIFKEMTGKG 596

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           ++P+   Y+  I G  K     +A  + ++M  +GF  D I YN L+ G C+    + A 
Sbjct: 597 IRPNAITYSVVIKGLCKQLMFHDAKNVLDDMYREGFDADPIPYNTLIQGFCETQDAKNAF 656

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
            +   MV  G +P  +TY  +++     G +        +  ++G       YT LI A 
Sbjct: 657 YVYELMVCRGVMPSPVTYNLLVNVLCLKGLVIHAEMKLESFRKQGAELRKFAYTTLIKAQ 716

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
            A+G    A M+  ++   G   ++  ++A IN LC+ +   +A  L   M   G+ P+ 
Sbjct: 717 CAKGMPYKAIMWVGKLLDAGFEASIEDFSAAINRLCKRQFTREALMLISIMLSVGVYPDI 776

Query: 664 YTYTIL 669
             Y +L
Sbjct: 777 QLYRVL 782



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/510 (25%), Positives = 255/510 (50%), Gaps = 5/510 (0%)

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
           N ++  L + GF   A+ V+ +M ++G+ PS  TY+T++   CK G + EA ++   +  
Sbjct: 254 NTLMSALCNWGFIQDAKSVFCLMLKYGLNPSRHTYSTIIHGLCKVGSVNEAFDIFQSVTE 313

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
            G   + VT N LI GF  +G   +   +I  M  LG++    +Y  +I G+ E G + E
Sbjct: 314 EGMELDIVTCNSLINGFRLHGHTREIPKMIEMMRGLGVEPDVVTYTILITGHCEGGDVEE 373

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
            + + ++++ +G+   + TY++LI  L K G   +  + F E+    +  D+I+Y+ L++
Sbjct: 374 GMRIRKDILGQGIELNIVTYSVLINALFKKGLFYEVENLFGEICSIGLELDVIAYSILIH 433

Query: 392 GYCRSGNIGEAFLLFDELR-SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
           G+C+ G IG A  +++ +  S+ ++PT V + +++ GLC+ G L+ A+   E + ++   
Sbjct: 434 GFCKLGEIGRALQVWNLMCCSQRVIPTSVNHVSILLGLCKKGFLDEARSYLETVASKYQP 493

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD--TSEAY 508
            DV+ Y ++++G  K+G++  A + ++ ++  G+ P      + + G  K GD   +E+Y
Sbjct: 494 SDVVLYNVVIDGYAKVGDIGNAVQLYDAIIMAGMCPTIVTCNSLLYGYCKFGDLHMAESY 553

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
            +  ++      P  +TY  L+  L + G +     + ++M G G  P+ ITY+ +I   
Sbjct: 554 FMAIQL--SDLLPTTVTYTTLMDALSEAGKVHSMLSIFKEMTGKGIRPNAITYSVVIKGL 611

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
            +       +++ ++M R+G     + Y  LI         + AF  +  M  +G+ P+ 
Sbjct: 612 CKQLMFHDAKNVLDDMYREGFDADPIPYNTLIQGFCETQDAKNAFYVYELMVCRGVMPSP 671

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
           +TYN L+N LC    +  A        ++G    K+ YT LI   C  G   +A+    +
Sbjct: 672 VTYNLLVNVLCLKGLVIHAEMKLESFRKQGAELRKFAYTTLIKAQCAKGMPYKAIMWVGK 731

Query: 689 MLDREIEPDYCTHSALLLKQLDKDYKVHAV 718
           +LD   E      SA + +   + +   A+
Sbjct: 732 LLDAGFEASIEDFSAAINRLCKRQFTREAL 761



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 131/477 (27%), Positives = 237/477 (49%), Gaps = 6/477 (1%)

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
           S + ++ + +S+ +     +AL +L +M       +  TY+ L+    +    + A  + 
Sbjct: 146 SSIVWDALANSYARAQMNHDALYVLSKMNSLNMQISITTYDSLLYSLRKA---DVALAIF 202

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG-VAPTLATYNILIYGLCK 360
           ++M   G+  S +S+  +I G  ++G + EAL+  +E    G   P   T+N L+  LC 
Sbjct: 203 KEMESCGIPPSDYSHGILIDGLCKQGKIGEALSFLQETRKEGKFKPLGMTFNTLMSALCN 262

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
           WG + DA+  F  ML+  + P   +Y+T+++G C+ G++ EAF +F  +    +   +VT
Sbjct: 263 WGFIQDAKSVFCLMLKYGLNPSRHTYSTIIHGLCKVGSVNEAFDIFQSVTEEGMELDIVT 322

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
            N+LI+G   +G      ++ E M   G+ PDV+TYTI++ G C+ G++        ++L
Sbjct: 323 CNSLINGFRLHGHTREIPKMIEMMRGLGVEPDVVTYTILITGHCEGGDVEEGMRIRKDIL 382

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            +G++ +   Y+  I    K G   E   L  E+ + G   D+I Y++L+HG CKLG + 
Sbjct: 383 GQGIELNIVTYSVLINALFKKGLFYEVENLFGEICSIGLELDVIAYSILIHGFCKLGEIG 442

Query: 541 EANELLRKM-VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
            A ++   M      IP  + + SI+    + G L   R     +  K     +V Y V+
Sbjct: 443 RALQVWNLMCCSQRVIPTSVNHVSILLGLCKKGFLDEARSYLETVASKYQPSDVVLYNVV 502

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           I  +A  G +  A   +  + + G+ P ++T N+L+ G C+   +  A   F+ ++   +
Sbjct: 503 IDGYAKVGDIGNAVQLYDAIIMAGMCPTIVTCNSLLYGYCKFGDLHMAESYFMAIQLSDL 562

Query: 660 LPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVH 716
           LP   TYT L++    AG     L ++KEM  + I P+  T+S +++K L K    H
Sbjct: 563 LPTTVTYTTLMDALSEAGKVHSMLSIFKEMTGKGIRPNAITYS-VVIKGLCKQLMFH 618



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/300 (22%), Positives = 119/300 (39%), Gaps = 37/300 (12%)

Query: 160 DVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLR 219
           D +I  G+  C +I   + LL  Y K   +      F  +  + LLP       ++  L 
Sbjct: 520 DAIIMAGM--CPTIVTCNSLLYGYCKFGDLHMAESYFMAIQLSDLLPTTVTYTTLMDALS 577

Query: 220 DNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGV 279
           + G       +++ M   GI+P+ +TY+ ++   CK+    +A  +L +M   G   + +
Sbjct: 578 EAGKVHSMLSIFKEMTGKGIRPNAITYSVVIKGLCKQLMFHDAKNVLDDMYREGFDADPI 637

Query: 280 TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
            YN LI GF    + + A                + Y  ++C                  
Sbjct: 638 PYNTLIQGFCETQDAKNA---------------FYVYELMVC------------------ 664

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
             RGV P+  TYN+L+  LC  G V  A  +     ++       +Y TL+   C  G  
Sbjct: 665 --RGVMPSPVTYNLLVNVLCLKGLVIHAEMKLESFRKQGAELRKFAYTTLIKAQCAKGMP 722

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
            +A +   +L       ++  ++  I+ LC+      A  L   M++ G+ PD+  Y ++
Sbjct: 723 YKAIMWVGKLLDAGFEASIEDFSAAINRLCKRQFTREALMLISIMLSVGVYPDIQLYRVL 782


>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis]
 gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis]
          Length = 1113

 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 160/568 (28%), Positives = 283/568 (49%), Gaps = 42/568 (7%)

Query: 177  DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
            ++++  Y+K   V++ + + + M  N   PD+   N +I  L   G   +A +++  + +
Sbjct: 513  NMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKD 572

Query: 237  FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
              + P++VTYNT++    KEG++Q A+EL   M G GC PN +T+N ++    +N E++ 
Sbjct: 573  MKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDL 632

Query: 297  ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
            A  ++  M  +       ++N II G   +  + +A+ L  +M  + + P   T   L+ 
Sbjct: 633  ALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQM-KKMLTPDCVTLCTLLP 691

Query: 357  GLCKWGRVSDA---------------RHRFFEMLRKNVIPDIISYNTLLYG-------YC 394
            G+ K G + DA                 RF+E L   ++    +  T+L+G        C
Sbjct: 692  GVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVC 751

Query: 395  RSGNI-----------------GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
            + G++                    F+ F   +   + PT+ +YN LI+G     + E+A
Sbjct: 752  KDGSVLMPIIKVLCKHKQALVAQSVFIRFT--KELGVKPTLESYNFLIEGFLGVHNDEMA 809

Query: 438  QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
              L   M N G  PDV TY ++++   K G ++   E + +M+    +P+   +   IA 
Sbjct: 810  WNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIAN 869

Query: 498  ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
             +K     +A  L  ++++  F P   TY  L+ GL K G LEEA EL  +MV  G  P+
Sbjct: 870  LVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPN 929

Query: 558  HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
            +  Y  +I+   + GD+    +LF  M+R+G+ P L +YT L+      GR++ A  YF 
Sbjct: 930  NAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFE 989

Query: 618  EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
            +++  G+  + I YN +I+GL R  RI++A  L+ +M+  GI P+ +TY  LI     AG
Sbjct: 990  KLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAG 1049

Query: 678  NWQEALRLYKEMLDREIEPDYCTHSALL 705
              ++A +LY+E+    +EP+  T++AL+
Sbjct: 1050 MVEQAGKLYEELQFIGLEPNVFTYNALI 1077



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 170/616 (27%), Positives = 284/616 (46%), Gaps = 22/616 (3%)

Query: 93  LVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVC 152
           ++ VLN I + P  A  +F  V   P V         +LEIL      R    V + VV 
Sbjct: 94  VMAVLNSILD-PTDAFSYFNSVAEMPFVVHTTETCNHMLEIL------RIHRRVGDMVVV 146

Query: 153 VNMHGILDVLIGGGLSSCVSIKILDLLLLIYTK---KSMVEQCLLVFNKMLRNGLLPDVK 209
            N+           + + +  + L+  L+I+     +  + Q    F KM   G   +  
Sbjct: 147 FNL-----------MQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAY 195

Query: 210 NCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM 269
           + N +I +L  +G   +A E+YR M   G+KPS+ T++ ++ +  K  + +    LL EM
Sbjct: 196 SYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEM 255

Query: 270 QGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLL 329
           +  G  PN  TY + I    R G +++A  +++ M   G      +Y  +I      G L
Sbjct: 256 ESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKL 315

Query: 330 VEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTL 389
            +A+ L  +M      P   TY  ++      G +   +  + EM      PD+I++  L
Sbjct: 316 DDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTIL 375

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
           +   C++GNI EAF L D +R + ++P + TYNTLI GL R   L+ A  L  NM   G+
Sbjct: 376 VNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGV 435

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
           +P   TY + ++   K G    A E F +M  +G+ P+  A    +    ++G   EA  
Sbjct: 436 VPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKV 495

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           +   + + G  PD +TYN+++    K G ++EA ELL  M  +   PD I   S+I+   
Sbjct: 496 IFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLY 555

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
           + G +     +F  +    L+PT+VTY  LI      G+++ A   F+ M   G  PN I
Sbjct: 556 KAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTI 615

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           T+N +++ LC+   +D A  +   M     +P+  T+  +I+         +A+ L+ +M
Sbjct: 616 TFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQM 675

Query: 690 LDREIEPDYCTHSALL 705
             + + PD  T   LL
Sbjct: 676 -KKMLTPDCVTLCTLL 690



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 137/514 (26%), Positives = 243/514 (47%), Gaps = 1/514 (0%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+ +  +  +  + L ++ +M+  GL P +K  + ++        +   + +   M   G
Sbjct: 200 LIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLG 259

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           +KP+I TY   +    + G + EA  ++  M+  GC P+ VTY VLI      G+L+ A 
Sbjct: 260 LKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAM 319

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L   M     K    +Y  ++  +S+ G L        EM   G AP + T+ IL+  L
Sbjct: 320 ELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNAL 379

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           CK G + +A H    M ++ V+P++ +YNTL+ G  R   + +A  LF+ + +  +VPT 
Sbjct: 380 CKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTA 439

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
            TY   ID   + G  + A +  E M  +GI P+++     +    +MG L  A+  FN 
Sbjct: 440 YTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNR 499

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           +   GL PD   Y   +    K G   EA  L  +M      PD+I  N L++ L K G 
Sbjct: 500 LKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGR 559

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           ++EA ++  ++      P  +TY ++I    + G ++R  +LF +M   G  P  +T+  
Sbjct: 560 VDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNT 619

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           ++        ++LA     +M      P+V+T+N +I+GL   +R+  A  LF  M++  
Sbjct: 620 ILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKM- 678

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
           + P+  T   L+      G  ++A ++ ++ + R
Sbjct: 679 LTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHR 712



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 157/571 (27%), Positives = 250/571 (43%), Gaps = 71/571 (12%)

Query: 172  SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
             I +++ L+    K   V++   +F ++    L P V   N +I  L   G   +A E++
Sbjct: 543  DIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELF 602

Query: 232  RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI------ 285
              M   G  P+ +T+NT+LD  CK  E+  AL++L++M    C P+ +T+N +I      
Sbjct: 603  ASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIE 662

Query: 286  ----------------------------TGFSRNGELEQARGLIRDML-KLGLKVSAHSY 316
                                         G  +NG +E A  +  D + +LG+ V    +
Sbjct: 663  KRVSDAIWLFHQMKKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFW 722

Query: 317  NPIICGY-----SEKGLL--------------------VEALNLEEEMVTR--------- 342
              ++ G      +EK +L                    ++ L   ++ +           
Sbjct: 723  EDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTK 782

Query: 343  --GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
              GV PTL +YN LI G         A + F EM      PD+ +YN LL  + +SG I 
Sbjct: 783  ELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKIN 842

Query: 401  EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
            E F L++++   +  P  +T+N +I  L +   L+ A  L  ++++    P   TY  ++
Sbjct: 843  ELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLL 902

Query: 461  NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
            +G  K G L  A+E F EM+  G +P+   Y   I G  K GD + A  L + M+ +G  
Sbjct: 903  DGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIR 962

Query: 521  PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
            PDL +Y  LV  LC+ G +++A     K+   G   D I Y  +I        +     L
Sbjct: 963  PDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTL 1022

Query: 581  FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
            ++ M  +G++P L TY  LI      G +E A   + E+Q  G+ PNV TYNALI G   
Sbjct: 1023 YDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSM 1082

Query: 641  LRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
                D AY ++  M   G  PN  T+  L N
Sbjct: 1083 SGNSDSAYAVYKRMMVGGCSPNTGTFAQLPN 1113



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 140/578 (24%), Positives = 264/578 (45%), Gaps = 42/578 (7%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           ++  + +F KM  +   PD      ++    D G   + +E +  M   G  P ++T+  
Sbjct: 315 LDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTI 374

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++++ CK G + EA  LL  M+ +G  PN  TYN LI+G  R   L+ A  L  +M  LG
Sbjct: 375 LVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLG 434

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           +  +A++Y   I  Y + G   +AL   E+M  RG+AP +   N  +Y L + GR+ +A+
Sbjct: 435 VVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAK 494

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F  +    + PD ++YN ++  Y ++G + EA  L  ++      P ++  N+LI+ L
Sbjct: 495 VIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTL 554

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
            + G ++ A ++   + +  + P V+TY  ++ G  K G +  A E F  M   G  P+ 
Sbjct: 555 YKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNT 614

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             + T +    K  +   A ++  +M      PD++T+N ++HGL     + +A  L  +
Sbjct: 615 ITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQ 674

Query: 549 MVGDGFIPDHITYTSIIHASLEMG--------------------DLRRGRDLFNNMLRKG 588
           M      PD +T  +++   ++ G                    D R   DL   +L + 
Sbjct: 675 M-KKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQA 733

Query: 589 LSPTLVTY-------------TVLIH------AHAARGRLELAFMYFSEMQVKGIRPNVI 629
            +   + +             +VL+        H      +  F+ F++    G++P + 
Sbjct: 734 GTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKEL--GVKPTLE 791

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           +YN LI G   +   + A+ LF +M+  G  P+ +TY +L++ +  +G   E   LY++M
Sbjct: 792 SYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQM 851

Query: 690 LDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLG 727
           +    +P+  TH+ ++   +  +    A++    L  G
Sbjct: 852 ICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSG 889



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 132/447 (29%), Positives = 214/447 (47%), Gaps = 2/447 (0%)

Query: 280 TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
           TY ++  G    G L Q       M + G  ++A+SYN +I    + GL  EAL +   M
Sbjct: 161 TYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRM 220

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
           V  G+ P+L T++ L+    K       +    EM    + P+I +Y   +    R+G I
Sbjct: 221 VLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRI 280

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
            EA  +   +      P VVTY  LID LC  G L+ A +L   M      PD +TY  M
Sbjct: 281 DEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITM 340

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           ++     G+L   +EF++EM   G  PD   +T  +    K G+  EA+ L + M  +G 
Sbjct: 341 LDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGV 400

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
            P+L TYN L+ GL ++  L++A +L   M   G +P   TY   I    + G   +  +
Sbjct: 401 LPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALE 460

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
            F  M  +G++P +V     +++ A  GRL  A + F+ ++  G+ P+ +TYN ++    
Sbjct: 461 TFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYS 520

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
           +  ++D+A  L  DM E    P+      LIN    AG   EA +++  + D ++ P   
Sbjct: 521 KAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVV 580

Query: 700 THSALLLKQLDKDYKVH-AVEYLESLT 725
           T++  L+  L K+ +V  A+E   S+T
Sbjct: 581 TYNT-LIAGLGKEGQVQRAMELFASMT 606



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 135/537 (25%), Positives = 248/537 (46%), Gaps = 15/537 (2%)

Query: 117 QPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKIL 176
           + G   + + +  ++ +L++SGL R A  +   +V   +                S+K  
Sbjct: 187 EAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKP--------------SLKTF 232

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
             L++   K+   E    +  +M   GL P++      I+VL   G   +A  + + M +
Sbjct: 233 SALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMED 292

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G  P +VTY  ++D+ C  G++ +A+EL  +M+     P+ VTY  ++  FS  G+L +
Sbjct: 293 DGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGR 352

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
            +    +M   G      ++  ++    + G + EA +L + M  +GV P L TYN LI 
Sbjct: 353 VKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLIS 412

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           GL +  R+ DA   F  M    V+P   +Y   +  Y +SG   +A   F++++ R + P
Sbjct: 413 GLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAP 472

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
            +V  N  +  L   G L  A+ +   + + G+ PD +TY +M+    K G +  A E  
Sbjct: 473 NIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELL 532

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           ++M     +PD     + I    K G   EA+++   +      P ++TYN L+ GL K 
Sbjct: 533 SDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKE 592

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G ++ A EL   M G+G  P+ IT+ +I+    +  ++     +   M      P ++T+
Sbjct: 593 GQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTF 652

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
             +IH      R+  A   F +M+ K + P+ +T   L+ G+ +   ++ A+ +  D
Sbjct: 653 NTIIHGLVIEKRVSDAIWLFHQMK-KMLTPDCVTLCTLLPGVVKNGLMEDAFKIAED 708



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 128/432 (29%), Positives = 212/432 (49%), Gaps = 27/432 (6%)

Query: 123  DEFVFCTILEILIESGLLRSAYWVVETVV-----CVN-------MHGIL----------- 159
            D    CT+L  ++++GL+  A+ + E  V      V+       M GIL           
Sbjct: 682  DCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILF 741

Query: 160  -DVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLV-FNKMLRNGLLPDVKNCNRIIKV 217
             D L+ G +    S+ +  + +L   K+++V Q + + F K L  G+ P +++ N +I+ 
Sbjct: 742  GDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKEL--GVKPTLESYNFLIEG 799

Query: 218  LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
                     A  ++  M   G  P + TYN +LD+  K G++ E  EL  +M    C PN
Sbjct: 800  FLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPN 859

Query: 278  GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
             +T+N++I    ++  L++A  L  D++      +  +Y P++ G  + G L EA  L E
Sbjct: 860  TITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFE 919

Query: 338  EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
            EMV  G  P  A YNILI G  K G V+ A   F  M+R+ + PD+ SY +L+   C +G
Sbjct: 920  EMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAG 979

Query: 398  NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
             + +A   F++L+   L    + YN +IDGL R   +E A  L + M ++GI PD+ TY 
Sbjct: 980  RVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYN 1039

Query: 458  IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
             ++      G +  A + + E+   GL+P+ F Y   I G    G++  AY + + M+  
Sbjct: 1040 SLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVG 1099

Query: 518  GFPPDLITYNVL 529
            G  P+  T+  L
Sbjct: 1100 GCSPNTGTFAQL 1111



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 106/211 (50%), Gaps = 3/211 (1%)

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           ++GD    + L +  + K    DL TY ++  GL   G L +      KM   GF  +  
Sbjct: 139 RVGDMVVVFNLMQNQIIK---RDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAY 195

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
           +Y  +IH  L+ G  R   +++  M+ +GL P+L T++ L+ A   R   E       EM
Sbjct: 196 SYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEM 255

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
           +  G++PN+ TY   I  L R  RID+A  +   ME++G  P+  TYT+LI+  C AG  
Sbjct: 256 ESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKL 315

Query: 680 QEALRLYKEMLDREIEPDYCTHSALLLKQLD 710
            +A+ L+ +M     +PD  T+  +L K  D
Sbjct: 316 DDAMELFVKMKASSHKPDRVTYITMLDKFSD 346


>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
 gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
          Length = 671

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 148/487 (30%), Positives = 240/487 (49%), Gaps = 16/487 (3%)

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           M+ +F + G + EA +++ EM+  G      T N ++      G    AR +   M + G
Sbjct: 117 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 176

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           +     S+  ++     +G + E   L   M   G +   AT  +++  LC+ GR  D  
Sbjct: 177 VCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 236

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F  ML     P++++Y   + G C+   + +AF + +E+  R L P V T+ TLIDGL
Sbjct: 237 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 296

Query: 429 CRYGDLEVAQQLKENMI-NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           C+ G  E A +L   +I +    P+V TYT+M+ G C+ G L+ A      M+ +GL+P+
Sbjct: 297 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 356

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              YTT I G  K G    A+ L  +M  +GF P++ TYN ++ G CK G ++EA ++LR
Sbjct: 357 TNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLR 416

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
                G   D ITYT +I    + G +    DLF+ M+  G  P +  YT LI  +  + 
Sbjct: 417 MATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQR 476

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
           ++E +  +F +  + G+ P   TY ++I G C++ R   A  +F  M + G   +  TY 
Sbjct: 477 QMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYG 536

Query: 668 ILINENCNAGNWQEALRLYKEMLDREIEP----------DYCTH-----SALLLKQLDKD 712
            LI+  C     +EA  LY+ MLD+ + P          +YC       +  +L +LDK 
Sbjct: 537 ALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKR 596

Query: 713 YKVHAVE 719
            +VH V+
Sbjct: 597 QQVHTVD 603



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 150/523 (28%), Positives = 247/523 (47%), Gaps = 14/523 (2%)

Query: 140 LRSAYWVV----ETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLV 195
           + +A WV+    ET   V    + D +   G+  C   +    L+++  ++  VE+   +
Sbjct: 146 VETANWVLRVGLETGSFVYARKVFDGMTRAGV--CPDERSFRALVVVCCREGKVEEVDAL 203

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
              M R G   D   C  +++ L + G      E +R M E G  P++V Y   +D  CK
Sbjct: 204 LAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCK 263

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK-LGLKVSAH 314
              +++A  +L EM GRG  PN  T+  LI G  + G  E+A  L   ++K    K + H
Sbjct: 264 RRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVH 323

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +Y  +I GY  +G L  A  L   MV +G+ P   TY  LI G CK G    A     +M
Sbjct: 324 TYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKM 383

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
            ++  +P+I +YN ++ G+C+ G I EA+ +     S+ L    +TY  LI   C+ G +
Sbjct: 384 KQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHI 443

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
             A  L + M+  G  PD+  YT +++  C+   +  +++FF++ L  GL P +  YT+ 
Sbjct: 444 TYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSM 503

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           IAG  K+G ++ A R+ E M+  G   D ITY  L+ GLCK   LEEA  L   M+    
Sbjct: 504 IAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRL 563

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
           +P  +T  ++   + E     +     + + R      + T  V++   +A G ++ A +
Sbjct: 564 VPCEVTRVTL---TFEYCRREKTSIAVSVLDRLDKRQQVHTVDVVVRKLSALGDVDAASL 620

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           +  ++  +    +  TY   IN      R    Y L  +M E+
Sbjct: 621 FLKKVLDEDYAVDHATYTGFINSCYENNR----YALASEMSEK 659



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 138/509 (27%), Positives = 239/509 (46%), Gaps = 4/509 (0%)

Query: 198 KMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG 257
           +M  +GL   V+  N +++V  + G  V AR+V+  M   G+ P   ++  ++   C+EG
Sbjct: 136 EMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREG 195

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
           +++E   LL  M   G S +  T  V++      G  +      R ML+ G   +  +Y 
Sbjct: 196 KVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYT 255

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
             I G  ++  + +A ++ EEMV RG+ P + T+  LI GLCK G    A   F ++++ 
Sbjct: 256 AWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKS 315

Query: 378 NVI-PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
           +   P++ +Y  ++ GYCR G +  A +L   +  + L P   TY TLI G C+ G  + 
Sbjct: 316 SSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDR 375

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
           A +L   M  +G LP++ TY  +++G CK G +  A +       +GL+ D+  YT  I 
Sbjct: 376 AFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILIT 435

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
              K G  + A  L + M+  G  PD+  Y  L+   C+   +EE+ +   K +  G +P
Sbjct: 436 EHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLP 495

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
              TYTS+I    ++G       +F  M++ G     +TY  LI       RLE A   +
Sbjct: 496 TKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALY 555

Query: 617 SEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNA 676
             M  K + P  +T   L    CR  +   A  +   +++       +T  +++ +    
Sbjct: 556 EGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKR---QQVHTVDVVVRKLSAL 612

Query: 677 GNWQEALRLYKEMLDREIEPDYCTHSALL 705
           G+   A    K++LD +   D+ T++  +
Sbjct: 613 GDVDAASLFLKKVLDEDYAVDHATYTGFI 641



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 166/340 (48%), Gaps = 7/340 (2%)

Query: 389 LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
           ++  +  +G + EA  +  E+RS  L   V T N ++      G    A+++ + M   G
Sbjct: 117 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 176

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG---DTS 505
           + PD  ++  +V   C+ G +         M R G   D    T  +    + G   D S
Sbjct: 177 VCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 236

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           E +R    ML  G PP+++ Y   + GLCK   +++A  +L +MVG G  P+  T+T++I
Sbjct: 237 EFFR---RMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLI 293

Query: 566 HASLEMGDLRRGRDLFNNMLRKG-LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
               ++G   R   LF  +++     P + TYTV+I  +   G+L  A M    M  +G+
Sbjct: 294 DGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGL 353

Query: 625 RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
           +PN  TY  LI G C+    D+A+ L   M++EG LPN YTY  +I+  C  G  QEA +
Sbjct: 354 KPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYK 413

Query: 685 LYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           + +    + ++ D  T++ L+ +   + +  +A++  + +
Sbjct: 414 VLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRM 453



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 142/300 (47%), Gaps = 3/300 (1%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K    ++   + NKM + G LP++   N +I      G   +A +V RM    G+K  
Sbjct: 367 HCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFD 426

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            +TY  ++   CK+G +  AL+L   M   GC P+   Y  LI+ + +  ++E+++    
Sbjct: 427 KITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFD 486

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
             L +GL  +  +Y  +I GY + G    AL + E MV  G      TY  LI GLCK  
Sbjct: 487 KCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKES 546

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R+ +A+  +  ML K ++P  ++  TL + YCR      A  + D L  R  V TV   +
Sbjct: 547 RLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKRQQVHTV---D 603

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            ++  L   GD++ A    + ++++    D  TYT  +N   +    ++A E   +  +K
Sbjct: 604 VVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFINSCYENNRYALASEMSEKFSKK 663



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/188 (22%), Positives = 74/188 (39%), Gaps = 15/188 (7%)

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           GSL  A+E++R MV                A  E G L    D+   M   GL   + T 
Sbjct: 105 GSLPMAHEVMRGMVA---------------AFGEAGRLPEAADMVLEMRSHGLPLCVETA 149

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
             ++      G    A   F  M   G+ P+  ++ AL+   CR  ++++   L   M  
Sbjct: 150 NWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWR 209

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVH 716
            G   +  T T+++   C  G +++    ++ ML+    P+   ++A +     + Y   
Sbjct: 210 YGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQ 269

Query: 717 AVEYLESL 724
           A   LE +
Sbjct: 270 AFHVLEEM 277


>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 152/505 (30%), Positives = 251/505 (49%), Gaps = 9/505 (1%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V+  L  F++ML     P +   N+I+              + R +    I+P   T N 
Sbjct: 44  VDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNI 103

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++ FC  G++  A  +L ++   G  P+ VT   LI G    G++++A      +L  G
Sbjct: 104 LINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQG 163

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            ++   SY  +I G  + G    A+ L   +  R   P +  YN +I  LCK   VS+A 
Sbjct: 164 FRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEAC 223

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
           + F EM  K +  ++++Y+ +++G+C  G + EA    +E+  + + P V  YNTL+D L
Sbjct: 224 NLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDAL 283

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
            + G ++ A+ +   ++   + P+VITY  +++G         A+  FN +   G+ PD 
Sbjct: 284 HKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDG--------YAKHVFNAVGLMGVTPDV 335

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
           ++Y   I    K+    EA  L +EM  K   P+ +TYN L+ GLCK G +  A +L+ +
Sbjct: 336 WSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDE 395

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG- 607
           M   G   + ITY S+I+   + G L +   L N M  +G+ P + T  +L+H    +G 
Sbjct: 396 MHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGK 455

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
           RL+ A   F ++  KG  PNV TYN +I G C+   +D+AY L   ME+ G  PN  T+ 
Sbjct: 456 RLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFK 515

Query: 668 ILINENCNAGNWQEALRLYKEMLDR 692
           I+I      G   +A +L  EM+ R
Sbjct: 516 IIICALLEKGETDKAEKLLCEMIAR 540



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 142/442 (32%), Positives = 225/442 (50%), Gaps = 28/442 (6%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
           L++L+  +     +     V +K+L+ G  PD      +IK L   G   KA   +  + 
Sbjct: 101 LNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLL 160

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
             G +   V+Y T+++  CK GE + A++LL  + GR   PN V YN +I    +   + 
Sbjct: 161 AQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVS 220

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
           +A  L  +M   G+  +  +Y+ II G+   G L EAL    EMV + + P +  YN L+
Sbjct: 221 EACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLV 280

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY---------------------- 393
             L K G+V +A++    +++  + P++I+YNTL+ GY                      
Sbjct: 281 DALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNI 340

Query: 394 -----CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
                C+   + EA  L+ E+  +N+VP  VTYN+LIDGLC+ G +  A  L + M ++G
Sbjct: 341 MINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRG 400

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT-SEA 507
              +VITY  ++NG CK G L  A    N+M  +G+QPD +     + G L  G     A
Sbjct: 401 HHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNA 460

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
             L +++L KG+ P++ TYN++++G CK G L+EA  L  KM   G  P+ IT+  II A
Sbjct: 461 QGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICA 520

Query: 568 SLEMGDLRRGRDLFNNMLRKGL 589
            LE G+  +   L   M+ +GL
Sbjct: 521 LLEKGETDKAEKLLCEMIARGL 542



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 146/499 (29%), Positives = 230/499 (46%), Gaps = 63/499 (12%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P I+ +N +LDSF K       + L   ++ +   P+  T N+LI  F   G++  A  +
Sbjct: 61  PPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSV 120

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  +LK G +                                   P   T   LI GLC 
Sbjct: 121 LSKILKWGYQ-----------------------------------PDTVTLTTLIKGLCL 145

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G+V  A H   ++L +    D +SY TL+ G C+ G    A  L   +  R   P VV 
Sbjct: 146 KGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVM 205

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YNT+ID LC+   +  A  L   M  +GI  +V+TY+ +++G C +G L+ A  F NEM+
Sbjct: 206 YNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMV 265

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG-------- 532
            K + PD + Y T +    K G   EA  +   ++     P++ITYN L+ G        
Sbjct: 266 LKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNA 325

Query: 533 -------------------LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
                              LCK+  +EEA  L ++M     +P+ +TY S+I    + G 
Sbjct: 326 VGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGR 385

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
           +    DL + M  +G    ++TY  LI+     G+L+ A    ++M+ +GI+P++ T N 
Sbjct: 386 ISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNI 445

Query: 634 LING-LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
           L++G LC+ +R+  A GLF D+ ++G  PN YTY I+I  +C  G   EA  L  +M D 
Sbjct: 446 LLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDS 505

Query: 693 EIEPDYCTHSALLLKQLDK 711
              P+  T   ++   L+K
Sbjct: 506 GCSPNAITFKIIICALLEK 524



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/342 (29%), Positives = 171/342 (50%), Gaps = 8/342 (2%)

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           V DA  +F  ML     P II +N +L  + +  +      L   L  + + P   T N 
Sbjct: 44  VDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNI 103

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           LI+  C  G + +A  +   ++  G  PD +T T ++ G C  G +  A  F +++L +G
Sbjct: 104 LINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQG 163

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
            + D+ +Y T I G  K+G+T  A +L   +  +   P+++ YN ++  LCK   + EA 
Sbjct: 164 FRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEAC 223

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
            L  +M   G   + +TY++IIH    +G L       N M+ K ++P +  Y  L+ A 
Sbjct: 224 NLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDAL 283

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
              G+++ A    + +    ++PNVITYN LI+G    + +  A GL       G+ P+ 
Sbjct: 284 HKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYA--KHVFNAVGLM------GVTPDV 335

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           ++Y I+IN  C     +EAL LYKEM  + + P+  T+++L+
Sbjct: 336 WSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLI 377


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 137/447 (30%), Positives = 224/447 (50%), Gaps = 8/447 (1%)

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
            ++   C  G   +A  +L         P+ + YN ++ G+   G+L+ AR L+ DM   
Sbjct: 109 ALIKKLCASGRTADARRVLA-----ASGPDVMVYNAMVAGYCGAGQLDAARRLVADM--- 160

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
            ++  A++YN +I G   +G    AL + E+M  RG  P + TY IL+   CK      A
Sbjct: 161 PVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQA 220

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
                EM  K   PDI++YN +L G C+ G + +A      L S    P  V+YN ++ G
Sbjct: 221 MKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKG 280

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           L      E A++L E M ++G  P+V+T+ ++++  C+ G +  A E   +M + G  P+
Sbjct: 281 LFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPN 340

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
             +Y   +    K     +A    E M+++G  PD+++YN L+  LC+ G ++ A ELL 
Sbjct: 341 SLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLH 400

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
           ++   G  P  I+Y ++I    + G  +   +L + M  KGL P ++TY+ +        
Sbjct: 401 QLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCRED 460

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
           R+E A   F ++Q  GIRP    YNA++ GLC+ R    A  LF  M   G +PN+ TYT
Sbjct: 461 RIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYT 520

Query: 668 ILINENCNAGNWQEALRLYKEMLDREI 694
           IL+      G  +EA  L+ ++  R +
Sbjct: 521 ILVEGLAYEGLVKEARELFAQLCSRGV 547



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 124/384 (32%), Positives = 201/384 (52%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           PD    N +I+ L   G +  A  V   M   G  P +VTY  +L++ CK    ++A++L
Sbjct: 164 PDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKL 223

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           L EM  +GC+P+ VTYNV++ G  + G +E A   ++++   G + +  SYN ++ G   
Sbjct: 224 LDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFT 283

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
                +A  L EEM  +G  P + T+N+LI  LC+ G V  A     +M +    P+ +S
Sbjct: 284 AERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLS 343

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           YN LL+ +C+   I +A    + + SR   P +V+YNTL+  LCR G+++VA +L   + 
Sbjct: 344 YNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLK 403

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
           ++G  P +I+Y  +++G  K G    A E  +EM  KGLQPD   Y+T  +G  +     
Sbjct: 404 DKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIE 463

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           EA R   ++   G  P    YN ++ GLCK      A +L   M+  G +P+  TYT ++
Sbjct: 464 EAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILV 523

Query: 566 HASLEMGDLRRGRDLFNNMLRKGL 589
                 G ++  R+LF  +  +G+
Sbjct: 524 EGLAYEGLVKEARELFAQLCSRGV 547



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 120/417 (28%), Positives = 212/417 (50%), Gaps = 6/417 (1%)

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           R GEL+ A  L+  +  L    S  +  P  C    K L       +   V     P + 
Sbjct: 79  RRGELDDALRLVDSLAGLN-PPSPAAVGP--CAALIKKLCASGRTADARRVLAASGPDVM 135

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
            YN ++ G C  G++  AR    +M    V PD  +YNTL+ G C  G    A  + +++
Sbjct: 136 VYNAMVAGYCGAGQLDAARRLVADM---PVEPDAYTYNTLIRGLCGRGRTSNALAVLEDM 192

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
             R  +P VVTY  L++  C+    + A +L + M ++G  PD++TY +++NG C+ G +
Sbjct: 193 FRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRV 252

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A EF   +   G +P+  +Y   + G        +A +L EEM  KG PP+++T+N+L
Sbjct: 253 EDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNML 312

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           +  LC+ G +E A E+L +M   G  P+ ++Y  ++HA  +   + +  +    M+ +G 
Sbjct: 313 ISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGC 372

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
            P +V+Y  L+ A    G +++A     +++ KG  P +I+YN +I+GL +  +  +A  
Sbjct: 373 YPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALE 432

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
           L  +M  +G+ P+  TY+ + +  C     +EA+R + ++ D  I P    ++A+LL
Sbjct: 433 LLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILL 489



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 207/419 (49%), Gaps = 3/419 (0%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           PDV   N ++      G    AR   R++ +  ++P   TYNT++   C  G    AL +
Sbjct: 132 PDVMVYNAMVAGYCGAGQLDAAR---RLVADMPVEPDAYTYNTLIRGLCGRGRTSNALAV 188

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           L +M  RGC P+ VTY +L+    +    +QA  L+ +M   G      +YN ++ G  +
Sbjct: 189 LEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQ 248

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
           +G + +A+   + + + G  P   +YNI++ GL    R  DA     EM  K   P++++
Sbjct: 249 EGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVT 308

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           +N L+   CR G +  A  + +++      P  ++YN L+   C+   +  A +  E M+
Sbjct: 309 FNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMV 368

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
           ++G  PD+++Y  ++   C+ G + +A E  +++  KG  P   +Y T I G  K G T 
Sbjct: 369 SRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTK 428

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           EA  L +EM +KG  PD+ITY+ +  GLC+   +EEA     K+   G  P    Y +I+
Sbjct: 429 EALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAIL 488

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
               +  +     DLF  M+  G  P   TYT+L+   A  G ++ A   F+++  +G+
Sbjct: 489 LGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRGV 547



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 114/363 (31%), Positives = 189/363 (52%)

Query: 193 LLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDS 252
           L V   M R G LPDV     +++         +A ++   M + G  P IVTYN +L+ 
Sbjct: 186 LAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNG 245

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
            C+EG +++A+E L  +   GC PN V+YN+++ G       E A  L+ +M   G   +
Sbjct: 246 ICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPN 305

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
             ++N +I     +GL+  A+ + E+M   G  P   +YN L++  CK  ++  A     
Sbjct: 306 VVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVE 365

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
            M+ +   PDI+SYNTLL   CR+G +  A  L  +L+ +   P +++YNT+IDGL + G
Sbjct: 366 LMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAG 425

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
             + A +L + M ++G+ PD+ITY+ + +G C+   +  A   F ++   G++P    Y 
Sbjct: 426 KTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYN 485

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
             + G  K  +T  A  L   M++ G  P+  TY +LV GL   G ++EA EL  ++   
Sbjct: 486 AILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSR 545

Query: 553 GFI 555
           G +
Sbjct: 546 GVV 548



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/407 (29%), Positives = 199/407 (48%), Gaps = 15/407 (3%)

Query: 112 RWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCV 171
           R V   P V+ D + + T++  L   G   +A  V+E           D+   G L   V
Sbjct: 155 RLVADMP-VEPDAYTYNTLIRGLCGRGRTSNALAVLE-----------DMFRRGCLPDVV 202

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           +  IL   L    K+S  +Q + + ++M   G  PD+   N ++  +   G    A E  
Sbjct: 203 TYTIL---LEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFL 259

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
           + +  +G +P+ V+YN +L         ++A +L+ EM  +GC PN VT+N+LI+   R 
Sbjct: 260 KNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRR 319

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G +E A  ++  M + G   ++ SYNP++  + ++  + +A+   E MV+RG  P + +Y
Sbjct: 320 GLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSY 379

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           N L+  LC+ G V  A     ++  K   P +ISYNT++ G  ++G   EA  L DE+ S
Sbjct: 380 NTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTS 439

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           + L P ++TY+T+  GLCR   +E A +    + + GI P    Y  ++ G CK      
Sbjct: 440 KGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHN 499

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           A + F  M+  G  P+   YT  + G    G   EA  L  ++ ++G
Sbjct: 500 AIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRG 546



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 128/244 (52%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           ++   ++L+    ++ +VE  + V  +M + G  P+  + N ++          KA E  
Sbjct: 305 NVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFV 364

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
            +M   G  P IV+YNT+L + C+ GE+  A+ELL +++ +GCSP  ++YN +I G ++ 
Sbjct: 365 ELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKA 424

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G+ ++A  L+ +M   GL+    +Y+ I  G   +  + EA+    ++   G+ PT A Y
Sbjct: 425 GKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALY 484

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           N ++ GLCK     +A   F  M+    +P+  +Y  L+ G    G + EA  LF +L S
Sbjct: 485 NAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCS 544

Query: 412 RNLV 415
           R +V
Sbjct: 545 RGVV 548



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 3/99 (3%)

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           P+V+ YNA++ G C   ++D A  L  DM  E   P+ YTY  LI   C  G    AL +
Sbjct: 132 PDVMVYNAMVAGYCGAGQLDAARRLVADMPVE---PDAYTYNTLIRGLCGRGRTSNALAV 188

Query: 686 YKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
            ++M  R   PD  T++ LL     +     A++ L+ +
Sbjct: 189 LEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEM 227


>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 732

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 150/484 (30%), Positives = 240/484 (49%), Gaps = 2/484 (0%)

Query: 184 TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
            K S  ++ + +   M   G+ P+V   +  I   R  G    A ++ + M   G+ P +
Sbjct: 232 AKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGLAPDV 291

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           +TY+T++D+  K G+ + A  LL EM  +G   N +TY+++I   ++ G+ E+A  L+R+
Sbjct: 292 ITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLRE 351

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M + G+     +Y+  I   ++KG   EA+ L  EM   GV P   +Y I+I    K GR
Sbjct: 352 MQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGR 411

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
             +A     EM    V PD+I+Y+  +    ++    +A  L  E+ +  L P V++YN+
Sbjct: 412 WREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNS 471

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG-NLSMAREFFNEMLRK 482
            ID   + G  ++A +L   M   G+ PDVITY+ ++  SC MG     A + F EM R+
Sbjct: 472 AIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVI-ASCAMGRQWEEALDLFREMQRQ 530

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G+ PD  +  T I    + G   EA  +  EM   G  PD I+Y   +    K    +E 
Sbjct: 531 GITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEI 590

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            +LLR+M   G  PD I+Y   + A    G  +    L  +ML  GLSP +VTY   I+A
Sbjct: 591 IDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINA 650

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
            A  GR + A +   +M   G+ P+V ++NA I+      +   A  +  +M   G+ PN
Sbjct: 651 CAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVLFEMRALGVSPN 710

Query: 663 KYTY 666
           + TY
Sbjct: 711 EATY 714



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 152/532 (28%), Positives = 246/532 (46%), Gaps = 2/532 (0%)

Query: 191 QCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTML 250
           + L V ++M   G+ PD +N +  I    +     +A E+   M   G  P ++TY++ +
Sbjct: 169 KALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTYSSAI 228

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
            +  K    +EA+ LL  M+G+G  PN + Y+  I+   + G+ E A  L+++M  +GL 
Sbjct: 229 AACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGLA 288

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
               +Y+ +I   +++G    A  L  EM T+GV   + TY+I+I    KWG+  +A   
Sbjct: 289 PDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVAL 348

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
             EM    V PD+I+Y++ +    + G   EA  L  E+    + P  ++Y  +I    +
Sbjct: 349 LREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAK 408

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
            G    A  L + M   G+ PDVI Y+  ++   +      A     EM   GL P+  +
Sbjct: 409 RGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVIS 468

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG-SLEEANELLRKM 549
           Y + I    K G +  A  L  EM A G  PD+ITY+ ++   C +G   EEA +L R+M
Sbjct: 469 YNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIAS-CAMGRQWEEALDLFREM 527

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRL 609
              G  PD ++  + I+A  + G      D+   M   GL P  ++Y   I A A   R 
Sbjct: 528 QRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRW 587

Query: 610 ELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL 669
           +       EM   G+ P+ I+Y   ++         +A  L  DM   G+ P+  TY   
Sbjct: 588 KEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSA 647

Query: 670 INENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYL 721
           IN     G W+EA  L ++M    + PD  + +A +    + D    AVE L
Sbjct: 648 INACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVL 699



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 129/445 (28%), Positives = 214/445 (48%)

Query: 257 GEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSY 316
           G+ ++AL++L  MQ +G  P+   Y+  I       + E+A  L+  M   G      +Y
Sbjct: 165 GDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTY 224

Query: 317 NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
           +  I   ++     EA+ L   M  +GV P +  Y+  I    K G+   A     EM  
Sbjct: 225 SSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPA 284

Query: 377 KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
             + PD+I+Y+T++    + G    AF L  E+ ++ +V  ++TY+ +I    ++G  E 
Sbjct: 285 VGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEE 344

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
           A  L   M   G+ PDVITY+  ++   K G    A     EM  +G+ P+  +Y   I+
Sbjct: 345 AVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVIS 404

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
              K G   EA  L +EM A G PPD+I Y+  +    +    E+A  LLR+M   G  P
Sbjct: 405 ACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTP 464

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
           + I+Y S I A  + G  +   +L   M   GL+P ++TY+ +I + A   + E A   F
Sbjct: 465 NVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLF 524

Query: 617 SEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNA 676
            EMQ +GI P+V++ N  IN   +    ++A  +  +M   G++P+  +Y   I+     
Sbjct: 525 REMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKG 584

Query: 677 GNWQEALRLYKEMLDREIEPDYCTH 701
             W+E + L +EM    + PD  ++
Sbjct: 585 DRWKEIIDLLREMSTVGLTPDAISY 609



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 183/393 (46%), Gaps = 6/393 (1%)

Query: 184 TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
            K    E+ + +  +M  NG+ PDV   +  I      G   +A  + R M   G+ P+ 
Sbjct: 337 AKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNA 396

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           ++Y  ++ +  K G  +EA++LL EMQ  G  P+ + Y+  I   ++    EQA  L+R+
Sbjct: 397 ISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLRE 456

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M   GL  +  SYN  I   ++ G    A+ L  EM   G+AP + TY+ +I   C  GR
Sbjct: 457 MPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIAS-CAMGR 515

Query: 364 V-SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
              +A   F EM R+ + PD++S NT +    + G   EA  +  E+ +  LVP  ++Y 
Sbjct: 516 QWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYR 575

Query: 423 TLIDGLCRYGDL--EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           T ID  C  GD   E+   L+E M   G+ PD I+Y   ++     G    A     +ML
Sbjct: 576 TAIDA-CAKGDRWKEIIDLLRE-MSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDML 633

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
             GL PD   Y + I    K G   EA  L  +M   G  PD+ ++N  +          
Sbjct: 634 AVGLSPDVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWG 693

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
            A E+L +M   G  P+  TY + ++A    G+
Sbjct: 694 TAVEVLFEMRALGVSPNEATYLTAMYACKRCGE 726



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 137/276 (49%)

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
           +YGD   A  + + M  QG+ PD   Y+  +           A E    M  +G  PD  
Sbjct: 163 QYGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVL 222

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
            Y++ IA   K+    EA  L   M  +G  P++I Y+  +    K G  E A +LL++M
Sbjct: 223 TYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEM 282

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRL 609
              G  PD ITY+++I A  + G       L   M  KG+   ++TY+++I A A  G+ 
Sbjct: 283 PAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQW 342

Query: 610 ELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL 669
           E A     EMQ  G+ P+VITY++ I+   +  + ++A GL  +M  EG+ PN  +Y I+
Sbjct: 343 EEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIV 402

Query: 670 INENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           I+     G W+EA+ L +EM    + PD   +SA +
Sbjct: 403 ISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAI 438



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 154/344 (44%), Gaps = 35/344 (10%)

Query: 397 GNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
           G+  +A  + D ++ + + P    Y++ I         E A +L  +M  +G  PDV+TY
Sbjct: 165 GDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTY 224

Query: 457 TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA 516
           +  +    K+     A      M  +G++P+   Y+  I+   K G    A  L +EM A
Sbjct: 225 SSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPA 284

Query: 517 KGFPPDLITYNVLVH----------------------------------GLC-KLGSLEE 541
            G  PD+ITY+ ++                                   G C K G  EE
Sbjct: 285 VGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEE 344

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A  LLR+M  +G  PD ITY+S I A  + G       L   M  +G++P  ++Y ++I 
Sbjct: 345 AVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVIS 404

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
           A A RGR   A     EMQ  G+ P+VI Y+A I+   +  R +QA  L  +M   G+ P
Sbjct: 405 ACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTP 464

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           N  +Y   I+     G  + A+ L +EM    + PD  T+SA++
Sbjct: 465 NVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVI 508



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 131/258 (50%)

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G+   A +  + M  +G++PD   Y++ IA          A  L   M A+G PPD++TY
Sbjct: 165 GDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTY 224

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           +  +    K+   +EA  LLR M G G  P+ I Y++ I A  + G      DL   M  
Sbjct: 225 SSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPA 284

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
            GL+P ++TY+ +I A A RG+ E AF    EM  KG+  N+ITY+ +I    +  + ++
Sbjct: 285 VGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEE 344

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
           A  L  +M+E G+ P+  TY+  I+     G W+EA+ L +EM    + P+  ++  ++ 
Sbjct: 345 AVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVIS 404

Query: 707 KQLDKDYKVHAVEYLESL 724
               +     A++ L+ +
Sbjct: 405 ACAKRGRWREAIDLLQEM 422



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 145/318 (45%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +++    K+    + + +  +M  +G+ PDV N +  I          +A  + R M   
Sbjct: 401 IVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPAT 460

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G+ P++++YN+ +D+  K G  + A+ELL EM   G +P+ +TY+ +I   +   + E+A
Sbjct: 461 GLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEA 520

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L R+M + G+     S N  I   ++ G   EAL++  EM T G+ P   +Y   I  
Sbjct: 521 LDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDA 580

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
             K  R  +      EM    + PD ISY   +      G   EA +L  ++ +  L P 
Sbjct: 581 CAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPD 640

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           VVTYN+ I+   + G  + A  L   M   G+ PDV ++   ++          A E   
Sbjct: 641 VVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVLF 700

Query: 478 EMLRKGLQPDRFAYTTQI 495
           EM   G+ P+   Y T +
Sbjct: 701 EMRALGVSPNEATYLTAM 718



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 110/227 (48%)

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           + GD  +A  + + M  +G  PD   Y+  +         E A ELL  M   G  PD +
Sbjct: 163 QYGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVL 222

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
           TY+S I A  ++   +    L  +M  +G+ P ++ Y+  I A    G+ E A     EM
Sbjct: 223 TYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEM 282

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
              G+ P+VITY+ +I+   +  + + A+ L ++M  +G++ N  TY+I+I      G W
Sbjct: 283 PAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQW 342

Query: 680 QEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
           +EA+ L +EM +  + PD  T+S+ +     K     AV  L  + +
Sbjct: 343 EEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPM 389


>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 151/520 (29%), Positives = 252/520 (48%), Gaps = 1/520 (0%)

Query: 186 KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVT 245
           K  + Q      KM + G + +  + N +I  L   GF  +A +VY+ M   G+KPS+ T
Sbjct: 170 KGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKT 229

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           Y+ ++ +  +  +    ++LL EM+  G  PN  TY + I    R G ++ A G+++ M 
Sbjct: 230 YSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTME 289

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
             G      +Y  +I      G L +A  L  +M      P L TY  L+     +G + 
Sbjct: 290 DEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLE 349

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
             +  + EM      PD+++Y  L+   C+SG + +AF + D +R R +VP + TYNTLI
Sbjct: 350 TVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLI 409

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
            GL     L+ A +L  NM + G+ P   +Y + ++   K+G+   A + F +M ++G+ 
Sbjct: 410 SGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIM 469

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           P   A    +    ++G   EA  +  ++   G  PD +TYN+++    K G +++A +L
Sbjct: 470 PSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKL 529

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
           L +M+ +G  PD I   S+I    + G +     +F  +    L+PT+VTY +LI     
Sbjct: 530 LTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGK 589

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
            G+L  A   F  M+  G  PN +T+NAL++ LC+   +D A  +F  M      P+  T
Sbjct: 590 EGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLT 649

Query: 666 YTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           Y  +I      G    A   Y +M  + + PD+ T   LL
Sbjct: 650 YNTIIYGLIKEGRAGYAFWFYHQM-KKFLSPDHVTLYTLL 688



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 159/566 (28%), Positives = 279/566 (49%), Gaps = 38/566 (6%)

Query: 177  DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
            ++++  Y+K   +++   +  +ML  G  PD+   N +I  L   G   +A +++  + +
Sbjct: 511  NMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKD 570

Query: 237  FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
              + P++VTYN ++    KEG++ +AL+L   M+  GC PN VT+N L+    +N  ++ 
Sbjct: 571  LKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDL 630

Query: 297  ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
            A  +   M  +       +YN II G  ++G    A     +M  + ++P   T   L+ 
Sbjct: 631  ALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQM-KKFLSPDHVTLYTLLP 689

Query: 357  GLCKWGRVSDARHRFFEMLRKN--------------------VIPDIISYN--------- 387
            G+ K GRV DA     E + ++                     I + IS+          
Sbjct: 690  GVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSIC 749

Query: 388  -------TLLYGYCRSGNIGEAFLLFDEL-RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
                    L+   C+     +A  LFD+  +S    PT  +YN L+DGL      E A +
Sbjct: 750  QDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALK 809

Query: 440  LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
            L   M N G  P++ TY ++++   K   +    E +NEML +G +P+   +   I+  +
Sbjct: 810  LFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALV 869

Query: 500  KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
            K    ++A  L  E+++  F P   TY  L+ GL K G  EEA ++  +M      P+  
Sbjct: 870  KSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCA 929

Query: 560  TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
             Y  +I+   + G++    DLF  M+++G+ P L +YT+L+      GR++ A  YF E+
Sbjct: 930  IYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEEL 989

Query: 620  QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
            ++ G+ P+ ++YN +INGL + RR+++A  LF +M+  GI P  YTY  LI    NAG  
Sbjct: 990  KLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMV 1049

Query: 680  QEALRLYKEMLDREIEPDYCTHSALL 705
             +A ++++E+    +EP+  T++AL+
Sbjct: 1050 DQAGKMFEELQFMGLEPNVFTYNALI 1075



 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 152/505 (30%), Positives = 259/505 (51%), Gaps = 4/505 (0%)

Query: 205 LPDV----KNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQ 260
           LP++    + CN +++ LR +G       V+ +M +  I  +  TY T+  +   +G ++
Sbjct: 115 LPNIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIR 174

Query: 261 EALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII 320
           +A   L +M+  G   N  +YN LI    + G  ++A  + + M+  GLK S  +Y+ ++
Sbjct: 175 QAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALM 234

Query: 321 CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
                +      ++L EEM T G+ P + TY I I  L + GR+ DA      M  +   
Sbjct: 235 VALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCG 294

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           PD+++Y  L+   C +G + +A  L+ ++R+ +  P +VTY TL+     YGDLE  ++ 
Sbjct: 295 PDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRF 354

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
              M   G  PDV+TYTI+V   CK G +  A +  + M  +G+ P+   Y T I+G L 
Sbjct: 355 WSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLN 414

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
           L    EA  L   M + G  P   +Y + +    KLG  E+A +   KM   G +P    
Sbjct: 415 LRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAA 474

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
             + +++  EMG +R  +D+FN++   GLSP  VTY +++  ++  G+++ A    +EM 
Sbjct: 475 CNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEML 534

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
            +G  P++I  N+LI+ L +  R+D+A+ +F  +++  + P   TY ILI      G   
Sbjct: 535 SEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLL 594

Query: 681 EALRLYKEMLDREIEPDYCTHSALL 705
           +AL L+  M +    P+  T +ALL
Sbjct: 595 KALDLFGSMKESGCPPNTVTFNALL 619



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 145/517 (28%), Positives = 243/517 (47%), Gaps = 7/517 (1%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL---RDNGFSVKAREVYRMMG 235
           L+    +    ++ L V+ +M+  GL P +K  + ++  L   RD G      ++   M 
Sbjct: 198 LIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTG---TIMDLLEEME 254

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
             G++P+I TY   +    + G + +A  +L  M+  GC P+ VTY VLI      G+L+
Sbjct: 255 TLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLD 314

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
           +A+ L   M     K    +Y  ++  +   G L        EM   G AP + TY IL+
Sbjct: 315 KAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILV 374

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
             LCK G+V  A      M  + ++P++ +YNTL+ G      + EA  LF+ + S  + 
Sbjct: 375 EALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVA 434

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           PT  +Y   ID   + GD E A    E M  +GI+P +      +    +MG +  A++ 
Sbjct: 435 PTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDI 494

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
           FN++   GL PD   Y   +    K G   +A +L  EML++G  PD+I  N L+  L K
Sbjct: 495 FNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYK 554

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
            G ++EA ++  ++      P  +TY  +I    + G L +  DLF +M   G  P  VT
Sbjct: 555 AGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVT 614

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           +  L+        ++LA   F  M +    P+V+TYN +I GL +  R   A+  +  M+
Sbjct: 615 FNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMK 674

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
           +  + P+  T   L+      G  ++A+++  E + +
Sbjct: 675 KF-LSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQ 710



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 157/569 (27%), Positives = 264/569 (46%), Gaps = 38/569 (6%)

Query: 173  IKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR 232
            I +++ L+    K   V++   +F ++    L P V   N +I  L   G  +KA +++ 
Sbjct: 542  IIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFG 601

Query: 233  MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
             M E G  P+ VT+N +LD  CK   +  AL++   M    CSP+ +TYN +I G  + G
Sbjct: 602  SMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEG 661

Query: 293  ELEQA---------------------------RGLIRDMLKL--------GLKVSAHSYN 317
                A                            G + D +K+        GL+ S   + 
Sbjct: 662  RAGYAFWFYHQMKKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWG 721

Query: 318  PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
             ++     +  + EA++  E +V   +         LI  LCK  +  DA+  F +  + 
Sbjct: 722  ELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKS 781

Query: 378  -NVIPDIISYNTLLYGYCRSGNIGEAFL-LFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
                P   SYN L+ G     NI EA L LF E+++    P + TYN L+D   +   ++
Sbjct: 782  LGTHPTPESYNCLMDGLL-GCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRID 840

Query: 436  VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
               +L   M+ +G  P++IT+ I+++   K  +++ A + + E++     P    Y   I
Sbjct: 841  ELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLI 900

Query: 496  AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
             G LK G + EA ++ EEM      P+   YN+L++G  K G++  A +L ++M+ +G  
Sbjct: 901  GGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIR 960

Query: 556  PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
            PD  +YT ++      G +      F  +   GL P  V+Y ++I+      RLE A   
Sbjct: 961  PDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSL 1020

Query: 616  FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
            FSEM+ +GI P + TYNALI        +DQA  +F +++  G+ PN +TY  LI  +  
Sbjct: 1021 FSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSK 1080

Query: 676  AGNWQEALRLYKEMLDREIEPDYCTHSAL 704
            +GN   A  ++K+M+     P+  T + L
Sbjct: 1081 SGNKDRAFSVFKKMMIVGCSPNAGTFAQL 1109



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 179/720 (24%), Positives = 310/720 (43%), Gaps = 89/720 (12%)

Query: 77  RWVSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIE 136
           R +S+  +  +     L+  L R R+   I +     +ET  G++ + + +   + +L  
Sbjct: 217 RMISEGLKPSMKTYSALMVALGRRRDTGTI-MDLLEEMETL-GLRPNIYTYTICIRVLGR 274

Query: 137 SGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVF 196
           +G +  AY +++T+             G G        ++D L         +++   ++
Sbjct: 275 AGRIDDAYGILKTMEDE----------GCGPDVVTYTVLIDAL----CAAGKLDKAKELY 320

Query: 197 NKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKE 256
            KM  +   PD+     ++    + G     +  +  M   G  P +VTY  ++++ CK 
Sbjct: 321 TKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKS 380

Query: 257 GEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSY 316
           G++ +A ++L  M+ RG  PN  TYN LI+G      L++A  L  +M  LG+  +A+SY
Sbjct: 381 GKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSY 440

Query: 317 NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRF----- 371
              I  Y + G   +AL+  E+M  RG+ P++A  N  +Y L + GR+ +A+  F     
Sbjct: 441 VLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHN 500

Query: 372 ------------------------------FEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
                                          EML +   PDII  N+L+    ++G + E
Sbjct: 501 CGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDE 560

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           A+ +F  L+   L PTVVTYN LI GL + G L  A  L  +M   G  P+ +T+  +++
Sbjct: 561 AWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLD 620

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
             CK   + +A + F  M      PD   Y T I G +K G    A+    +M  K   P
Sbjct: 621 CLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQM-KKFLSP 679

Query: 522 DLITYNVLVHGLCKLGSLEEA--------------------NELLRKMVGDGFIPDHITY 561
           D +T   L+ G+ K G +E+A                     EL+  ++ +  I + I++
Sbjct: 680 DHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISF 739

Query: 562 TS----------------IIHASLEMGDLRRGRDLFNNMLRK-GLSPTLVTYTVLIHAHA 604
                             +I    +       + LF+   +  G  PT  +Y  L+    
Sbjct: 740 AEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLL 799

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
                E A   F EM+  G  PN+ TYN L++   + +RID+ + L+ +M   G  PN  
Sbjct: 800 GCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNII 859

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           T+ I+I+    + +  +AL LY E++  +  P  CT+  L+   L       A++  E +
Sbjct: 860 THNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEM 919



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 141/560 (25%), Positives = 263/560 (46%), Gaps = 17/560 (3%)

Query: 95  RVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAY-------WVV 147
           +V+NR    P   L  F+ +  + G+++  F     L  + ++G + +AY       +++
Sbjct: 151 QVINR---NPNTYLTIFKALSIKGGIRQAPFA----LGKMRQAGFVLNAYSYNGLIYFLL 203

Query: 148 ETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPD 207
           +   C     +   +I  GL    S+K    L++   ++      + +  +M   GL P+
Sbjct: 204 QPGFCKEALKVYKRMISEGLKP--SMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPN 261

Query: 208 VKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLW 267
           +      I+VL   G    A  + + M + G  P +VTY  ++D+ C  G++ +A EL  
Sbjct: 262 IYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYT 321

Query: 268 EMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKG 327
           +M+     P+ VTY  L++ F   G+LE  +    +M   G      +Y  ++    + G
Sbjct: 322 KMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSG 381

Query: 328 LLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYN 387
            + +A ++ + M  RG+ P L TYN LI GL    R+ +A   F  M    V P   SY 
Sbjct: 382 KVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYV 441

Query: 388 TLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
             +  Y + G+  +A   F++++ R ++P++   N  +  L   G +  A+ +  ++ N 
Sbjct: 442 LFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNC 501

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
           G+ PD +TY +M+    K G +  A +   EML +G +PD     + I    K G   EA
Sbjct: 502 GLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEA 561

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
           +++   +      P ++TYN+L+ GL K G L +A +L   M   G  P+ +T+ +++  
Sbjct: 562 WQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDC 621

Query: 568 SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
             +   +     +F  M     SP ++TY  +I+     GR   AF ++ +M+ K + P+
Sbjct: 622 LCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMK-KFLSPD 680

Query: 628 VITYNALINGLCRLRRIDQA 647
            +T   L+ G+ +  R++ A
Sbjct: 681 HVTLYTLLPGVVKDGRVEDA 700



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 142/498 (28%), Positives = 227/498 (45%), Gaps = 38/498 (7%)

Query: 176  LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
             + LL    K   V+  L +F +M      PDV   N II  L   G +  A   Y  M 
Sbjct: 615  FNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMK 674

Query: 236  EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWE-MQGRGCSPNGVTYNVLITGFSRNGEL 294
            +F + P  VT  T+L    K+G +++A++++ E +   G   +   +  L+       E+
Sbjct: 675  KF-LSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEI 733

Query: 295  EQARG-------------------LIRDMLK-----------------LGLKVSAHSYNP 318
            E+A                     LIR + K                 LG   +  SYN 
Sbjct: 734  EEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNC 793

Query: 319  IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
            ++ G     +   AL L  EM   G  P + TYN+L+    K  R+ +    + EML + 
Sbjct: 794  LMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRG 853

Query: 379  VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
              P+II++N ++    +S +I +A  L+ E+ S +  PT  TY  LI GL + G  E A 
Sbjct: 854  CKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAM 913

Query: 439  QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
            ++ E M +    P+   Y I++NG  K GN+++A + F  M+++G++PD  +YT  +   
Sbjct: 914  KIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECL 973

Query: 499  LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
               G   +A    EE+   G  PD ++YN++++GL K   LEEA  L  +M   G  P+ 
Sbjct: 974  FMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPEL 1033

Query: 559  ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
             TY ++I      G + +   +F  +   GL P + TY  LI  H+  G  + AF  F +
Sbjct: 1034 YTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKK 1093

Query: 619  MQVKGIRPNVITYNALIN 636
            M + G  PN  T+  L N
Sbjct: 1094 MMIVGCSPNAGTFAQLPN 1111



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 150/292 (51%)

Query: 170  CVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE 229
            C +I   +LLL  + K   +++   ++N+ML  G  P++   N II  L  +    KA +
Sbjct: 820  CPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALD 879

Query: 230  VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
            +Y  +      P+  TY  ++    K G  +EA+++  EM    C PN   YN+LI GF 
Sbjct: 880  LYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFG 939

Query: 290  RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
            + G +  A  L + M+K G++    SY  ++      G + +A++  EE+   G+ P   
Sbjct: 940  KAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTV 999

Query: 350  TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
            +YN++I GL K  R+ +A   F EM  + + P++ +YN L+  +  +G + +A  +F+EL
Sbjct: 1000 SYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEEL 1059

Query: 410  RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
            +   L P V TYN LI G  + G+ + A  + + M+  G  P+  T+  + N
Sbjct: 1060 QFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQLPN 1111



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 81/304 (26%), Positives = 144/304 (47%), Gaps = 5/304 (1%)

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
           N+V T  T N +++ L  +G +E    + + M  Q I  +  TY  +       G +  A
Sbjct: 117 NIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQA 176

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
                +M + G   + ++Y   I   L+ G   EA ++ + M+++G  P + TY+ L+  
Sbjct: 177 PFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVA 236

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           L +        +LL +M   G  P+  TYT  I      G +     +   M  +G  P 
Sbjct: 237 LGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPD 296

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
           +VTYTVLI A  A G+L+ A   +++M+    +P+++TY  L++       ++     + 
Sbjct: 297 VVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWS 356

Query: 653 DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL-----LK 707
           +ME +G  P+  TYTIL+   C +G   +A  +   M  R I P+  T++ L+     L+
Sbjct: 357 EMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLR 416

Query: 708 QLDK 711
           +LD+
Sbjct: 417 RLDE 420


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 159/511 (31%), Positives = 251/511 (49%), Gaps = 19/511 (3%)

Query: 106 IALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGG 165
           +A +FF+WV TQ G         T++E+L   G+ R      E +  V     +      
Sbjct: 1   MAYKFFKWVRTQRGGVPSVRACTTLVEML---GIARRFNEAEEVLAEVEKSRYI------ 51

Query: 166 GLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSV 225
                +  +I   L   Y    ++E+ +    +M  +         N +I      G++ 
Sbjct: 52  -----LQPRIFIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQ 106

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           KA  VYR+MG+ G++P   T+N ++++F K   +    +L  EMQ + CSPN +TY++LI
Sbjct: 107 KALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILI 166

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
               + G +E+A  +  DM   G + +  +Y  +I G  + G + +A  L EEM + G+ 
Sbjct: 167 DAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLV 226

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
            T   YN LI+GL + GR   A   F EML K + PD +++ +L+YG   +G   EA  +
Sbjct: 227 ATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRI 286

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
           F E R       V  YN LID LC+   L+ A ++   +   G++PDV T+  +++G CK
Sbjct: 287 FQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCK 346

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
            G +  A     +M R G  PD   Y T I G  K G   EA +L  EM + G+ PD++T
Sbjct: 347 SGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVT 406

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           YN L+   CK G +E+A  L  ++   GF  + +TY +I++     G +     LFN M 
Sbjct: 407 YNTLIDESCKGGRIEDALRLFEEISAKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGMK 465

Query: 586 RKG----LSPTLVTYTVLIHAHAARGRLELA 612
           ++     + P  VTYT L++     G  ELA
Sbjct: 466 QETVDGVIDPDFVTYTTLLNGARQAGLSELA 496



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 138/426 (32%), Positives = 225/426 (52%), Gaps = 5/426 (1%)

Query: 284 LITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG 343
           L  G++  G LE++   ++ M      ++A +YN +I  + + G   +AL +   M   G
Sbjct: 60  LARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSG 119

Query: 344 VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF 403
           + P   T+N+L+    K  RV      F EM  +N  P++I+Y+ L+   C+ G + +A 
Sbjct: 120 LRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKAL 179

Query: 404 LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
            +F +++SR   P + TY ++IDGL + G ++ A  L E M ++G++   + Y  +++G 
Sbjct: 180 KVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGL 239

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
            + G    A + F EML KGLQPD   +T+ + G    G  SEA R+ +E    G   D+
Sbjct: 240 GRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDV 299

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
             YNVL+  LCK   L+EA E+  ++  DG +PD  T+ +++    + G +     L  +
Sbjct: 300 NLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGD 359

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           M R G +P +  Y  LI      GR+E A     EMQ  G  P+V+TYN LI+  C+  R
Sbjct: 360 MKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGR 419

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLY----KEMLDREIEPDYC 699
           I+ A  LF ++  +G   N  TY  ++N  C AG   EA +L+    +E +D  I+PD+ 
Sbjct: 420 IEDALRLFEEISAKG-FANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFV 478

Query: 700 THSALL 705
           T++ LL
Sbjct: 479 TYTTLL 484



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 143/480 (29%), Positives = 237/480 (49%), Gaps = 48/480 (10%)

Query: 201 RNGLLPDVKNCNRIIKVL----RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKE 256
           + G +P V+ C  ++++L    R N       EV +    + ++P I  +  +   +   
Sbjct: 12  QRGGVPSVRACTTLVEMLGIARRFNEAEEVLAEVEK--SRYILQPRI--FIELARGYASA 67

Query: 257 GEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSY 316
           G +++++E L  M+G  C+     YN LI  F + G  ++A  + R M + GL+   +++
Sbjct: 68  GLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTF 127

Query: 317 NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
           N ++  + +   +     L EEM  +  +P + TY+ILI  +CK G V  A   F +M  
Sbjct: 128 NVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKS 187

Query: 377 KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
           +   P+I +Y +++ G  +SG++ +AF LF+E+ S  LV T V YN+LI GL R G  + 
Sbjct: 188 RGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADA 247

Query: 437 AQQLKENMINQGILPDVITYTIMVNGS--------------------------------- 463
           A +L   M+++G+ PD +T+T +V G                                  
Sbjct: 248 AAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLID 307

Query: 464 --CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
             CK   L  A E F E+   GL PD + +   + G  K G   +A+ L  +M   G  P
Sbjct: 308 TLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTP 367

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           D+  YN L+ GL K G +EEA +LL +M   G+ PD +TY ++I  S + G +     LF
Sbjct: 368 DVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLF 427

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ---VKG-IRPNVITYNALING 637
             +  KG + T VTY  +++     GR++ A+  F+ M+   V G I P+ +TY  L+NG
Sbjct: 428 EEISAKGFANT-VTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNG 486


>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Glycine max]
          Length = 746

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 157/558 (28%), Positives = 272/558 (48%), Gaps = 29/558 (5%)

Query: 156 HGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGL-LPDVKNCNRI 214
           HG+L VL+  G +   ++ +LD +    +  S+  +  +VF +++R+G   PD +    +
Sbjct: 178 HGLLRVLLKSGRAG-DALHVLDEMPQANSGFSVTGE--IVFGELVRSGRSFPDGEVVGLV 234

Query: 215 IKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGC 274
            K                 +GE G+ P       ++   C + +   A E+L  +   G 
Sbjct: 235 AK-----------------LGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGG 277

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
           + +  + N L+T   R  ++++   L+ +M K  ++ S  ++  ++    +   + EAL 
Sbjct: 278 AVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQ 337

Query: 335 LEEEMVTRG------VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV-IPDIISYN 387
           + + +  +G      V P +  +N LI GLCK G+  D      EM   N+  P+ ++YN
Sbjct: 338 VFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYN 397

Query: 388 TLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
            L+ G+ ++GN   A  LF ++    + P V+T NTL+DGLC++G +  A +    M  +
Sbjct: 398 CLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGK 457

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
           G+  +  TYT +++  C + N++ A + F EML  G  PD   Y + I+G    G  ++A
Sbjct: 458 GLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDA 517

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
             +  ++   GF  D   YNVL+ G CK   LE   ELL +M   G  PD ITY ++I  
Sbjct: 518 SVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISY 577

Query: 568 SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM-QVKGIRP 626
             + GD      +   M+++GL P++VTY  +IHA+ ++  ++     F EM     + P
Sbjct: 578 LGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPP 637

Query: 627 NVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLY 686
           N + YN LI+ LCR   +D+A  L  DM+ + + PN  TY  ++    +     +A  L 
Sbjct: 638 NTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELM 697

Query: 687 KEMLDREIEPDYCTHSAL 704
             M++    PDY T   L
Sbjct: 698 DRMVEEACRPDYITMEVL 715



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 164/563 (29%), Positives = 275/563 (48%), Gaps = 16/563 (2%)

Query: 174 KILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRM 233
           K   LLL       +V   LL+FN++  +   P +  C+ +++VL  +G +  A  V   
Sbjct: 142 KSASLLLQCLENARLVNDSLLLFNQLDPSSKSPQL--CHGLLRVLLKSGRAGDALHVLDE 199

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEM---QEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
           M +     S VT   +     + G      E + L+ ++  RG  P+G     L+     
Sbjct: 200 MPQANSGFS-VTGEIVFGELVRSGRSFPDGEVVGLVAKLGERGVFPDGFKLTQLVGKLCG 258

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN-LEEEMVTRGVAPTLA 349
           + +   A  ++  +++LG  V A S N ++  +  +G  ++ +N L  EM  R + P++ 
Sbjct: 259 DQKNGVAWEVLHCVMRLGGAVDAASCNALLT-WLGRGRDIKRMNELLAEMEKRKIRPSVV 317

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKN------VIPDIISYNTLLYGYCRSGNIGEAF 403
           T+ IL+  LCK  R+ +A   F  +  K       V PD++ +NTL+ G C+ G   +  
Sbjct: 318 TFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGL 377

Query: 404 LLFDELRSRNL-VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
            L +E++  N+  P  VTYN LIDG  + G+ + A +L   M  +G+ P+VIT   +V+G
Sbjct: 378 SLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDG 437

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            CK G +  A EFFNEM  KGL+ +   YT  I+    + + + A +  EEML+ G  PD
Sbjct: 438 LCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPD 497

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
            + Y  L+ GLC  G + +A+ ++ K+   GF  D   Y  +I    +   L R  +L  
Sbjct: 498 AVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLT 557

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
            M   G+ P  +TY  LI      G    A     +M  +G+RP+V+TY A+I+  C  +
Sbjct: 558 EMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKK 617

Query: 643 RIDQAYGLFIDM-EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
            +D+   +F +M     + PN   Y ILI+  C   +   A+ L ++M  + + P+  T+
Sbjct: 618 NVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTY 677

Query: 702 SALLLKQLDKDYKVHAVEYLESL 724
           +A+L    DK     A E ++ +
Sbjct: 678 NAILKGVRDKKMLHKAFELMDRM 700



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 218/461 (47%), Gaps = 10/461 (2%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V + ++R G   D  +CN ++  L       +  E+   M +  I+PS+VT+  +++  C
Sbjct: 268 VLHCVMRLGGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLC 327

Query: 255 KEGEMQEALELLWEMQGRGCS------PNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           K   + EAL++   ++G+G S      P+ V +N LI G  + G+ E    L+ +M K+G
Sbjct: 328 KARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEM-KMG 386

Query: 309 L--KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
              + +  +YN +I G+ + G    A  L  +M   GV P + T N L+ GLCK GRV  
Sbjct: 387 NINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHR 446

Query: 367 ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
           A   F EM  K +  +  +Y  L+  +C   NI  A   F+E+ S    P  V Y +LI 
Sbjct: 447 AVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLIS 506

Query: 427 GLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
           GLC  G +  A  +   +   G   D   Y ++++G CK   L    E   EM   G++P
Sbjct: 507 GLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKP 566

Query: 487 DRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
           D   Y T I+   K GD + A ++ E+M+ +G  P ++TY  ++H  C   +++E  ++ 
Sbjct: 567 DTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIF 626

Query: 547 RKMVGDGFIP-DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
            +M     +P + + Y  +I A     D+ R   L  +M  K + P   TY  ++     
Sbjct: 627 GEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRD 686

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
           +  L  AF     M  +  RP+ IT   L   L  +  I++
Sbjct: 687 KKMLHKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEIEK 727



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/336 (24%), Positives = 149/336 (44%), Gaps = 41/336 (12%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F +M   G+ P+V   N ++  L  +G   +A E +  M   G+K +  TY  ++ +FC
Sbjct: 415 LFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFC 474

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTY--------------------------------- 281
               +  A++   EM   GCSP+ V Y                                 
Sbjct: 475 GVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRS 534

Query: 282 --NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
             NVLI+GF +  +LE+   L+ +M + G+K    +YN +I    + G    A  + E+M
Sbjct: 535 CYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKM 594

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN-VIPDIISYNTLLYGYCRSGN 398
           +  G+ P++ TY  +I+  C    V +    F EM   + V P+ + YN L+   CR+ +
Sbjct: 595 IKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNND 654

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           +  A  L ++++ + + P   TYN ++ G+     L  A +L + M+ +   PD IT  +
Sbjct: 655 VDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEV 714

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           +      +G +   + F      +G Q   +  ++Q
Sbjct: 715 LTEWLSAVGEIEKLKHFV-----EGYQDSSYPASSQ 745



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 115/255 (45%), Gaps = 1/255 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           + + +  F +ML +G  PD      +I  L   G    A  V   +   G       YN 
Sbjct: 479 INRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNV 538

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++  FCK+ +++   ELL EM+  G  P+ +TYN LI+   + G+   A  ++  M+K G
Sbjct: 539 LISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEG 598

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMV-TRGVAPTLATYNILIYGLCKWGRVSDA 367
           L+ S  +Y  II  Y  K  + E + +  EM  T  V P    YNILI  LC+   V  A
Sbjct: 599 LRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRA 658

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
                +M  K V P+  +YN +L G      + +AF L D +      P  +T   L + 
Sbjct: 659 ISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEW 718

Query: 428 LCRYGDLEVAQQLKE 442
           L   G++E  +   E
Sbjct: 719 LSAVGEIEKLKHFVE 733



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 101/206 (49%), Gaps = 2/206 (0%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           ++L+  + KK  +E+   +  +M   G+ PD    N +I  L   G    A +V   M +
Sbjct: 537 NVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIK 596

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM-QGRGCSPNGVTYNVLITGFSRNGELE 295
            G++PS+VTY  ++ ++C +  + E +++  EM       PN V YN+LI    RN +++
Sbjct: 597 EGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVD 656

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
           +A  L+ DM    ++ +  +YN I+ G  +K +L +A  L + MV     P   T  +L 
Sbjct: 657 RAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLT 716

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIP 381
             L   G +   +H F E  + +  P
Sbjct: 717 EWLSAVGEIEKLKH-FVEGYQDSSYP 741


>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1202

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 148/529 (27%), Positives = 272/529 (51%), Gaps = 2/529 (0%)

Query: 178  LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK-VLRDNGFSVKAREVYRMMGE 236
            LL ++  +  M+ +   +F  +   G+ P   +   ++  +++   F V    V+  + E
Sbjct: 487  LLSVLLNESKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTIN-VFLNILE 545

Query: 237  FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
               +PS   Y   + +  K  ++ + LEL   M+    SP    YNVLI G  +  +++ 
Sbjct: 546  SDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKD 605

Query: 297  ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
            A  L  +ML   L  S  +YN +I GY + G   ++  + E M    + P+L T+N L+ 
Sbjct: 606  AEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLK 665

Query: 357  GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
            GL K G V DA +   EM  +  +PD  +++ L  GY  +     A  +++      L  
Sbjct: 666  GLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKM 725

Query: 417  TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
               T + L++ LC+ G +E A+++    + +G++P+ + Y  M++G  + G+L  AR   
Sbjct: 726  NAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKI 785

Query: 477  NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
            + M ++G++PD  AY   I    +LGD   A +   +M  KG  P + TYN+L+ G  + 
Sbjct: 786  DAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRK 845

Query: 537  GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
               ++  +LL++M  +G +P+ ++Y ++I+   +   L   + +  +M  +G+SP +  Y
Sbjct: 846  YEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIY 905

Query: 597  TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
             +LI    ++G++E AF +  EM  KGI  N++TYN LI+GL    ++ +A  + +++  
Sbjct: 906  NMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISR 965

Query: 657  EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            +G+ P+ +TY  LI+    AGN Q  + LY+EM    I+P   T+  L+
Sbjct: 966  KGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLI 1014



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 159/546 (29%), Positives = 264/546 (48%), Gaps = 39/546 (7%)

Query: 195  VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
            +F++ML   LLP +   N +I     +G   K+ +V   M    I+PS++T+NT+L    
Sbjct: 609  LFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLF 668

Query: 255  KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
            K G +++A  +L EM+ +G  P+  T+++L  G+S N + + A G+    +  GLK++A+
Sbjct: 669  KAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAY 728

Query: 315  S-----------------------------------YNPIICGYSEKGLLVEALNLEEEM 339
            +                                   YN +I GYS KG LV A    + M
Sbjct: 729  TCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAM 788

Query: 340  VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
              +G+ P    YN LI   C+ G + +A     +M  K V P + +YN L+ GY R    
Sbjct: 789  EKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEF 848

Query: 400  GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
             + F L  E+     +P VV+Y TLI+ LC+   L  AQ +K +M ++G+ P+V  Y ++
Sbjct: 849  DKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNML 908

Query: 460  VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
            ++G C  G +  A  F  EM +KG++ +   Y T I G    G  +EA  +  E+  KG 
Sbjct: 909  IDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGL 968

Query: 520  PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
             PD+ TYN L+ G    G+++    L  +M   G  P   TY  +I    + G +   + 
Sbjct: 969  KPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEG-IELTKK 1027

Query: 580  LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
            +F  M    L P L+ Y  ++H +A  G ++ AF    +M  K I  +  TYN+LI G  
Sbjct: 1028 IFGEM---SLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQL 1084

Query: 640  RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
            ++ ++ +   L  +M+   + P   TY I++  +C   ++  A   Y+EM ++ +  D C
Sbjct: 1085 KVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEKGLLLDVC 1144

Query: 700  THSALL 705
                L+
Sbjct: 1145 IGDELV 1150



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 166/574 (28%), Positives = 272/574 (47%), Gaps = 40/574 (6%)

Query: 185  KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
            K S V + L +FN+M  + + P V   N +I  L        A +++  M    + PS++
Sbjct: 564  KLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLI 623

Query: 245  TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
            TYNT++D +CK+G  +++ ++   M+     P+ +T+N L+ G  + G +E A  ++ +M
Sbjct: 624  TYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEM 683

Query: 305  LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
               G    A +++ +  GYS       AL + E  V  G+     T +IL+  LCK G++
Sbjct: 684  KDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQI 743

Query: 365  SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
              A       + K ++P+ + YNT++ GY R G++  A +  D +  + + P  + YN L
Sbjct: 744  EKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCL 803

Query: 425  IDGLCRYGDLEVAQQ-----------------------------------LKENMINQGI 449
            I   C  GD+E A+Q                                   L + M + G 
Sbjct: 804  IRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGT 863

Query: 450  LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
            +P+V++Y  ++N  CK   L  A+    +M  +G+ P+   Y   I G    G   +A+R
Sbjct: 864  MPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFR 923

Query: 510  LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
              EEM  KG   +L+TYN L+ GL   G L EA ++L ++   G  PD  TY S+I    
Sbjct: 924  FSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYR 983

Query: 570  EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
              G+++R   L+  M   G+ PTL TY +LI      G +EL    F EM    ++P+++
Sbjct: 984  FAGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEG-IELTKKIFGEMS---LQPDLL 1039

Query: 630  TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
             YN +++       +D+A+ L   M E+ I  +K TY  LI      G   E   L  EM
Sbjct: 1040 VYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEM 1099

Query: 690  LDREIEPDYCTHSALLLKQLD-KDYKVHAVEYLE 722
              RE+EP+  T+  ++    + KDY    V Y E
Sbjct: 1100 KAREMEPEADTYDIIVKGHCEMKDYMGAYVWYRE 1133



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 151/514 (29%), Positives = 243/514 (47%), Gaps = 31/514 (6%)

Query: 172  SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
            S+   + LL    K  MVE    V  +M   G +PD    + +      N  +  A  VY
Sbjct: 656  SLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVY 715

Query: 232  RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
                + G+K +  T + +L++ CKEG++++A E+L     +G  PN V YN +I G+SR 
Sbjct: 716  ETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRK 775

Query: 292  GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
            G+L  AR  I  M K G+K    +YN +I  + E G +  A     +M  +GV+P++ TY
Sbjct: 776  GDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETY 835

Query: 352  NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
            NILI G  +            EM     +P+++SY TL+   C+   + EA ++  ++  
Sbjct: 836  NILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMED 895

Query: 412  RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
            R + P V  YN LIDG C  G +E A +  E M  +GI  +++TY  +++G    G L+ 
Sbjct: 896  RGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAE 955

Query: 472  AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG------------- 518
            A +   E+ RKGL+PD F Y + I+G    G+      L EEM   G             
Sbjct: 956  AEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLIS 1015

Query: 519  ------------------FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
                                PDL+ YN ++H     G +++A  L ++M+      D  T
Sbjct: 1016 LCTKEGIELTKKIFGEMSLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTT 1075

Query: 561  YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
            Y S+I   L++G L   R L + M  + + P   TY +++  H        A++++ EMQ
Sbjct: 1076 YNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQ 1135

Query: 621  VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
             KG+  +V   + L++GL    R  +A  +  +M
Sbjct: 1136 EKGLLLDVCIGDELVSGLKEEWRSKEAENVISEM 1169


>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
          Length = 563

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 147/487 (30%), Positives = 239/487 (49%), Gaps = 16/487 (3%)

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           M+ +F + G + EA +++ EM+  G      T N ++      G    AR +   M + G
Sbjct: 9   MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 68

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           +      +  ++     +G + E   L   M   G +   AT  +++  LC+ GR  D  
Sbjct: 69  VSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 128

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F  ML     P++++Y   + G C+   + +AF + +E+  R L P V T+ TLIDGL
Sbjct: 129 EFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 188

Query: 429 CRYGDLEVAQQLKENMI-NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           C+ G  E A +L   +I +    P+V TYT+M+ G C+ G L+ A      M+ +GL+P+
Sbjct: 189 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 248

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              YTT I G  K G    A+ L  +M  +GF P++ TYN ++ G CK G ++EA ++LR
Sbjct: 249 TNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLR 308

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
                G   D ITYT +I    + G +    DLF+ M+  G  P +  YT LI  +  + 
Sbjct: 309 MATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQR 368

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
           ++E +  +F +  + G+ P   TY ++I G C++ R   A  +F  M + G   +  TY 
Sbjct: 369 QMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYG 428

Query: 668 ILINENCNAGNWQEALRLYKEMLDREIEP----------DYCTH-----SALLLKQLDKD 712
            LI+  C     +EA  LY+ MLD+ + P          +YC       +  +L +LDK 
Sbjct: 429 ALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKR 488

Query: 713 YKVHAVE 719
            +VH V+
Sbjct: 489 QQVHTVD 495



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 151/501 (30%), Positives = 230/501 (45%), Gaps = 14/501 (2%)

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M   G+   + T N +L    + G    A ++   M   G SP    +  L+    R G+
Sbjct: 29  MRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVSPMNRGFGALVVVCCREGK 88

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           +E+   L+  M + G  +   +   ++    EKG   +       M+  G  P +  Y  
Sbjct: 89  VEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTA 148

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL-RSR 412
            I GLCK   V  A H   EM+ + + P++ ++ TL+ G C+ G    AF LF +L +S 
Sbjct: 149 WIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSS 208

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
           +  P V TY  +I G CR G L  A+ L   M+ QG+ P+  TYT ++ G CK G+   A
Sbjct: 209 SYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRA 268

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
            E  N+M ++G  P+ + Y   I G  K G   EAY++     ++G   D ITY +L+  
Sbjct: 269 FELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITE 328

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
            CK G +  A +L  +MV +G  PD   YTS+I    +   +   +  F+  L  GL PT
Sbjct: 329 HCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPT 388

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
             TYT +I  +   GR  LA   F  M   G   + ITY ALI+GLC+  R+++A  L+ 
Sbjct: 389 KQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYE 448

Query: 653 DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE-------------IEPDYC 699
            M ++ ++P + T   L  E C       A+ +   +  R+                D  
Sbjct: 449 GMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKRQQVHTVDVVVRKLSALGDVD 508

Query: 700 THSALLLKQLDKDYKVHAVEY 720
             S  L K LD+DY V    Y
Sbjct: 509 AASLFLKKVLDEDYAVDHATY 529



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 150/523 (28%), Positives = 247/523 (47%), Gaps = 14/523 (2%)

Query: 140 LRSAYWVV----ETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLV 195
           + +A WV+    ET   V    + D +   G+S     +    L+++  ++  VE+   +
Sbjct: 38  VETANWVLRVGLETGSFVYARKVFDGMTRAGVSP--MNRGFGALVVVCCREGKVEEVDAL 95

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
              M R G   D   C  +++ L + G      E +R M E G  P++V Y   +D  CK
Sbjct: 96  LAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCK 155

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK-LGLKVSAH 314
              +++A  +L EM GRG  PN  T+  LI G  + G  E+A  L   ++K    K + H
Sbjct: 156 RRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVH 215

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +Y  +I GY  +G L  A  L   MV +G+ P   TY  LI G CK G    A     +M
Sbjct: 216 TYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKM 275

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
            ++  +P+I +YN ++ G+C+ G I EA+ +     S+ L    +TY  LI   C+ G +
Sbjct: 276 KQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHI 335

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
             A  L + M+  G  PD+  YT +++  C+   +  +++FF++ L  GL P +  YT+ 
Sbjct: 336 TYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSM 395

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           IAG  K+G ++ A R+ E M+  G   D ITY  L+ GLCK   LEEA  L   M+    
Sbjct: 396 IAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRL 455

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
           +P  +T  ++   + E     +     + + R      + T  V++   +A G ++ A +
Sbjct: 456 VPCEVTRVTL---TFEYCRREKTSIAVSVLDRLDKRQQVHTVDVVVRKLSALGDVDAASL 512

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           +  ++  +    +  TY   IN      R    Y L  +M E+
Sbjct: 513 FLKKVLDEDYAVDHATYTGFINSCYENNR----YALASEMSEK 551



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 138/509 (27%), Positives = 238/509 (46%), Gaps = 4/509 (0%)

Query: 198 KMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG 257
           +M  +GL   V+  N +++V  + G  V AR+V+  M   G+ P    +  ++   C+EG
Sbjct: 28  EMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVSPMNRGFGALVVVCCREG 87

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
           +++E   LL  M   G S +  T  V++      G  +      R ML+ G   +  +Y 
Sbjct: 88  KVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYT 147

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
             I G  ++  + +A ++ EEMV RG+ P + T+  LI GLCK G    A   F ++++ 
Sbjct: 148 AWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKS 207

Query: 378 NVI-PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
           +   P++ +Y  ++ GYCR G +  A +L   +  + L P   TY TLI G C+ G  + 
Sbjct: 208 SSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDR 267

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
           A +L   M  +G LP++ TY  +++G CK G +  A +       +GL+ D+  YT  I 
Sbjct: 268 AFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILIT 327

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
              K G  + A  L + M+  G  PD+  Y  L+   C+   +EE+ +   K +  G +P
Sbjct: 328 EHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLP 387

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
              TYTS+I    ++G       +F  M++ G     +TY  LI       RLE A   +
Sbjct: 388 TKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALY 447

Query: 617 SEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNA 676
             M  K + P  +T   L    CR  +   A  +   +++       +T  +++ +    
Sbjct: 448 EGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKR---QQVHTVDVVVRKLSAL 504

Query: 677 GNWQEALRLYKEMLDREIEPDYCTHSALL 705
           G+   A    K++LD +   D+ T++  +
Sbjct: 505 GDVDAASLFLKKVLDEDYAVDHATYTGFI 533



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 164/340 (48%), Gaps = 7/340 (2%)

Query: 389 LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
           ++  +  +G + EA  +  E+RS  L   V T N ++      G    A+++ + M   G
Sbjct: 9   MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 68

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG---DTS 505
           + P    +  +V   C+ G +         M R G   D    T  +    + G   D S
Sbjct: 69  VSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 128

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           E +R    ML  G PP+++ Y   + GLCK   +++A  +L +MVG G  P+  T+T++I
Sbjct: 129 EFFR---RMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLI 185

Query: 566 HASLEMGDLRRGRDLFNNMLRKG-LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
               ++G   R   LF  +++     P + TYTV+I  +   G+L  A M    M  +G+
Sbjct: 186 DGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGL 245

Query: 625 RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
           +PN  TY  LI G C+    D+A+ L   M++EG LPN YTY  +I+  C  G  QEA +
Sbjct: 246 KPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYK 305

Query: 685 LYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           + +    + ++ D  T++ L+ +   + +  +A++  + +
Sbjct: 306 VLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRM 345



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 142/300 (47%), Gaps = 3/300 (1%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K    ++   + NKM + G LP++   N +I      G   +A +V RM    G+K  
Sbjct: 259 HCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFD 318

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            +TY  ++   CK+G +  AL+L   M   GC P+   Y  LI+ + +  ++E+++    
Sbjct: 319 KITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFD 378

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
             L +GL  +  +Y  +I GY + G    AL + E MV  G      TY  LI GLCK  
Sbjct: 379 KCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKES 438

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R+ +A+  +  ML K ++P  ++  TL + YCR      A  + D L  R  V TV   +
Sbjct: 439 RLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKRQQVHTV---D 495

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            ++  L   GD++ A    + ++++    D  TYT  +N   +    ++A E   +  +K
Sbjct: 496 VVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFINSCYENNRYALASEMSEKFSKK 555



 Score = 47.4 bits (111), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 35/167 (20%), Positives = 64/167 (38%)

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
           H     ++ A  E G L    D+   M   GL   + T   ++      G    A   F 
Sbjct: 3   HEVMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFD 62

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
            M   G+ P    + AL+   CR  ++++   L   M   G   +  T T+++   C  G
Sbjct: 63  GMTRAGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKG 122

Query: 678 NWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
            +++    ++ ML+    P+   ++A +     + Y   A   LE +
Sbjct: 123 RFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEM 169


>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 724

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 147/477 (30%), Positives = 241/477 (50%), Gaps = 1/477 (0%)

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ML +F + G + EA+ ++ +MQ +G SP+ +T N ++     +G ++ A  +  +M   G
Sbjct: 176 MLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRG 235

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           +   + S+  ++ G    G + EA      M+ RG  P  AT  +++  LC+ G V+ A 
Sbjct: 236 VCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAI 295

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F +M+     P++I++ +L+ G C+ G+I +AF + +E+      P V T+  LIDGL
Sbjct: 296 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 355

Query: 429 CRYGDLEVAQQLKENMINQGIL-PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           C+ G  E A +L   ++   I  P+V TYT M+ G CK   L+ A   F+ M  +GL P+
Sbjct: 356 CKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 415

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              YTT I G  K G+   AY L   M  +GF P++ TYN ++  LCK     EA ELL 
Sbjct: 416 VNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLN 475

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
           K    G   D +TYT +I    +  D+++    F  M + G    +    +LI A   + 
Sbjct: 476 KAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQK 535

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
           +++ +   F  +   G+ P   TY ++I+G C+    D A   F +M+  G +P+ +TY 
Sbjct: 536 KMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYG 595

Query: 668 ILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
            LI+  C      EA +LY+ M+DR + P   T   L  +   ++    A+  LE L
Sbjct: 596 SLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSASAMIVLEPL 652



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 142/462 (30%), Positives = 226/462 (48%), Gaps = 2/462 (0%)

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M   G+ PS +T N +L+   + G +  A  +  EM  RG  P+  ++ +++ G  R+G+
Sbjct: 196 MQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFKLMVIGCFRDGK 255

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           +++A   +  M++ G      +   I+    E GL+  A+    +M+  G  P L  +  
Sbjct: 256 IQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTS 315

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL-RSR 412
           LI GLCK G +  A     EM+R    P++ ++  L+ G C+ G   +AF LF +L RS 
Sbjct: 316 LIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD 375

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
              P V TY ++I G C+   L  A+ L   M  QG+ P+V TYT ++NG CK GN   A
Sbjct: 376 IYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRA 435

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
            E  N M  +G +P+ + Y   I    K     EAY L  +  + G   D +TY +L+  
Sbjct: 436 YELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQE 495

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
            CK   +++A     +M   GF  D      +I A      ++    LF  ++  GL PT
Sbjct: 496 QCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPT 555

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
             TYT +I  +   G  +LA  YF  M+  G  P+  TY +LI+GLC+   +D+A  L+ 
Sbjct: 556 KETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYE 615

Query: 653 DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
            M + G+ P + T   L  E C   +   A+ +  E LD+++
Sbjct: 616 AMIDRGLSPPEVTRVTLAYEYCKRNDSASAM-IVLEPLDKKL 656



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 140/507 (27%), Positives = 242/507 (47%), Gaps = 4/507 (0%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           M   GL P     N ++++  ++G    A  V+  M   G+ P   ++  M+    ++G+
Sbjct: 196 MQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFKLMVIGCFRDGK 255

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           +QEA   L  M  RG  P+  T  ++++    NG + +A    R M+ LG K +  ++  
Sbjct: 256 IQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTS 315

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           +I G  +KG + +A  + EEMV  G  P + T+  LI GLCK G    A   F +++R +
Sbjct: 316 LIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD 375

Query: 379 VI-PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
           +  P++ +Y +++ GYC+   +  A +LF  ++ + L P V TY TLI+G C+ G+ + A
Sbjct: 376 IYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRA 435

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
            +L   M ++G  P++ TY  +++  CK      A E  N+    GL+ D   YT  I  
Sbjct: 436 YELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQE 495

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
           + K  D  +A      M   GF  D+   N+L+   C+   ++E+  L + +V  G +P 
Sbjct: 496 QCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPT 555

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
             TYTS+I    + GD       F+NM R G  P   TY  LI     +  ++ A   + 
Sbjct: 556 KETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYE 615

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
            M  +G+ P  +T   L    C  +R D A  + +    +  L  + T   L+ + C+  
Sbjct: 616 AMIDRGLSPPEVTRVTLAYEYC--KRNDSASAMIVLEPLDKKLWIR-TVRTLVRKLCSEK 672

Query: 678 NWQEALRLYKEMLDREIEPDYCTHSAL 704
               A   ++++L+++   D  T +A 
Sbjct: 673 KVGVAALFFQKLLEKDSSADRVTLAAF 699



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 133/509 (26%), Positives = 232/509 (45%), Gaps = 18/509 (3%)

Query: 130 ILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMV 189
           +LEI IESGL+  A  V +    +++ G+           C       L+++   +   +
Sbjct: 211 VLEIAIESGLIDYAENVFDE---MSVRGV-----------CPDSSSFKLMVIGCFRDGKI 256

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           ++     + M++ G +PD   C  I+  L +NG   +A   +R M + G KP+++ + ++
Sbjct: 257 QEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTSL 316

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           +D  CK+G +++A E+L EM   G  PN  T+  LI G  + G  E+A  L   +++  +
Sbjct: 317 IDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDI 376

Query: 310 -KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            K + H+Y  +I GY ++  L  A  L   M  +G+ P + TY  LI G CK G    A 
Sbjct: 377 YKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAY 436

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
                M  +   P+I +YN ++   C+     EA+ L ++  S  L    VTY  LI   
Sbjct: 437 ELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQ 496

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+  D++ A      M   G   D+    I++   C+   +  +   F  ++  GL P +
Sbjct: 497 CKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTK 556

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             YT+ I+G  K GD   A +    M   G  PD  TY  L+ GLCK   ++EA +L   
Sbjct: 557 ETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEA 616

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M+  G  P  +T  ++ +   +  D      +   + +K    T+ T   L+    +  +
Sbjct: 617 MIDRGLSPPEVTRVTLAYEYCKRNDSASAMIVLEPLDKKLWIRTVRT---LVRKLCSEKK 673

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALING 637
           + +A ++F ++  K    + +T  A    
Sbjct: 674 VGVAALFFQKLLEKDSSADRVTLAAFTTA 702



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 129/464 (27%), Positives = 207/464 (44%), Gaps = 20/464 (4%)

Query: 112 RWVE--TQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSS 169
           RW+    Q G   D      IL  L E+GL+  A W    ++        D+     L +
Sbjct: 261 RWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMI--------DLGFKPNLIN 312

Query: 170 CVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE 229
             S  ++D L     KK  ++Q   +  +M+RNG  P+V     +I  L   G++ KA  
Sbjct: 313 FTS--LIDGL----CKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFR 366

Query: 230 VYRMMGEFGI-KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
           ++  +    I KP++ TY +M+  +CKE ++  A  L   M+ +G  PN  TY  LI G 
Sbjct: 367 LFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGH 426

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
            + G  ++A  L+  M   G + + ++YN +I    +K    EA  L  +  + G+    
Sbjct: 427 CKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADG 486

Query: 349 ATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDE 408
            TY ILI   CK   +  A   F  M +     D+   N L+  +CR   + E+  LF  
Sbjct: 487 VTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQL 546

Query: 409 LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
           + S  LVPT  TY ++I G C+ GD ++A +   NM   G +PD  TY  +++G CK   
Sbjct: 547 VVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSM 606

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
           +  A + +  M+ +GL P      T      K  D++ A  + E +  K +   + T   
Sbjct: 607 VDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSASAMIVLEPLDKKLW---IRTVRT 663

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           LV  LC    +  A    +K++      D +T  +   A  E G
Sbjct: 664 LVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESG 707


>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 148/520 (28%), Positives = 266/520 (51%), Gaps = 1/520 (0%)

Query: 187 SMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTY 246
           S ++  + +F++M+R   LP V + +++ K + +         ++R M   GI  S    
Sbjct: 41  SCLDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSIL 100

Query: 247 NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
           N + +S+C    +  A  +L      G   N VT+N L+ G     ++  A  L + +++
Sbjct: 101 NIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVR 160

Query: 307 LGL-KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
             + + +   Y  ++ G S++G   + L+L   M      P + TY+I+I  LCK   + 
Sbjct: 161 EKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLD 220

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
            A +   EM +KN+ P+I +YN+L+ G C+ G   +   L  E+ + N+ P V T++ LI
Sbjct: 221 AAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILI 280

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           DGLC+ G +E A ++  +MI +G+ PD+ITY+ +++G C  G +  AR  FN +  KG++
Sbjct: 281 DGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIK 340

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           P+ F+Y+  I G  K  + ++A +L  E+  KG  PD +TY+ ++HGL ++G + +A ++
Sbjct: 341 PNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKI 400

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
             +M+  G  PD   +++++    + G +     LF+ + R      +  YTV+I+    
Sbjct: 401 FDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCK 460

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
             R+  A   F ++   G+ P+V TYN +I G CR    D+  G+   ME+ G   N  T
Sbjct: 461 NDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNIT 520

Query: 666 YTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           Y +++     +    E +   KEM  R    D  T   L+
Sbjct: 521 YNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLI 560



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 127/435 (29%), Positives = 229/435 (52%), Gaps = 1/435 (0%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEM-QGRGCSPNGVTYNVLITGFSRNGELEQ 296
           GI  ++VT+NT+L     E ++ +A+ L  ++ + + C PN V Y  ++ G S+ G  E+
Sbjct: 127 GIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEK 186

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
              L+R M +   K    +Y+ +I    +   L  A+NL  EM  + + P + TYN LI 
Sbjct: 187 TLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLID 246

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           GLCK G+    +    EM+  N+ P++ +++ L+ G C+ G + +A  +   +  + + P
Sbjct: 247 GLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEP 306

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
            ++TY+ ++DG C  G ++ A+++   + ++GI P++ +Y+I++NG CK  NL+ A + F
Sbjct: 307 DIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLF 366

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
            E+ +KGL+PD   Y+T + G +++G   +A ++ +EML  G  PD+  ++ L+ G  K 
Sbjct: 367 GEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKY 426

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G +EEA  L  K+  +    +   YT +I+   +   +R    +F  +   GL P + TY
Sbjct: 427 GLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTY 486

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
            V+I      G  +       +M+  G   N ITYN ++ G  R  +I +      +M  
Sbjct: 487 NVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAG 546

Query: 657 EGILPNKYTYTILIN 671
            G   +  T  +LIN
Sbjct: 547 RGFSFDATTTGVLIN 561



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/416 (30%), Positives = 220/416 (52%), Gaps = 3/416 (0%)

Query: 189 VEQCLLVFNKMLRNGLL-PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
           V   +++F K++R  +  P+      ++  L   G + K   + R+M +   KP + TY+
Sbjct: 148 VTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYS 207

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
            ++D+ CK+  +  A+ LL EM+ +   PN  TYN LI G  + G+ E+ + L+ +M+ L
Sbjct: 208 IVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNL 267

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
            +  + H+++ +I G  ++G + +A  +   M+ +GV P + TY+ ++ G C  G+V  A
Sbjct: 268 NINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRA 327

Query: 368 RHRFFEMLR-KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
           R R F +LR K + P+I SY+ L+ GYC+  N+ +A  LF E+  + L P  VTY+T++ 
Sbjct: 328 R-RVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILH 386

Query: 427 GLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
           GL   G +  A+++ + M+  G  PD+  ++ ++ G  K G +  A   F+++ R     
Sbjct: 387 GLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDT 446

Query: 487 DRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
           +   YT  I G  K     EA+ + E++ + G  PD+ TYNV++ G C+ G  +E   +L
Sbjct: 447 NISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGIL 506

Query: 547 RKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
           RKM  +G   ++ITY  I+        +         M  +G S    T  VLI+ 
Sbjct: 507 RKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLINV 562



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 196/384 (51%)

Query: 184 TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
           +K+   E+ L +   M +    PDV+  + +I  L  +     A  +   M +  I P+I
Sbjct: 179 SKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNI 238

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
            TYN+++D  CK G+ ++   LL EM     +PN  T+++LI G  + G++E A  ++R 
Sbjct: 239 FTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRH 298

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M++ G++    +Y+ I+ GY  +G +  A  +   +  +G+ P + +Y+ILI G CK   
Sbjct: 299 MIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKN 358

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           ++ A   F E+ +K + PD ++Y+T+L+G    G IG+A  +FDE+      P +  ++T
Sbjct: 359 LAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHST 418

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           L+ G  +YG +E A  L   +       ++  YT+++NG CK   +  A   F ++   G
Sbjct: 419 LLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIG 478

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           L PD   Y   I G  + G   E   +  +M   G P + ITYNV++ G  +   + E  
Sbjct: 479 LIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIV 538

Query: 544 ELLRKMVGDGFIPDHITYTSIIHA 567
             +++M G GF  D  T   +I+ 
Sbjct: 539 SFMKEMAGRGFSFDATTTGVLINV 562



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 129/291 (44%), Gaps = 41/291 (14%)

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML------------- 515
           L  A   F+ M+R    P    ++      + +   S    L  EM              
Sbjct: 43  LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102

Query: 516 ----------------------AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
                                   G P +++T+N L+ GL     + +A  L +K+V + 
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162

Query: 554 FI-PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
              P+ + Y ++++   + G   +   L   M +    P + TY+++I A      L+ A
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAA 222

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
               +EM+ K I PN+ TYN+LI+GLC+L + ++   L  +M    I PN +T++ILI+ 
Sbjct: 223 INLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDG 282

Query: 673 NCNAGNWQEALRLYKEMLDREIEPDYCTHSAL-----LLKQLDKDYKVHAV 718
            C  G  ++A  + + M+++ +EPD  T+SA+     L  Q+D+  +V  V
Sbjct: 283 LCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNV 333



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 108/227 (47%), Gaps = 15/227 (6%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           A++ F  + +Q G+K D   + TIL  LIE G +  A  + + ++ V          G  
Sbjct: 362 AMQLFGEI-SQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRV----------GPT 410

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
              C+       LL  Y K  +VE+ +L+F+K+ RN    ++     +I  L  N    +
Sbjct: 411 PDICLH----STLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVRE 466

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A  ++  +   G+ P + TYN M+  FC+EG   E   +L +M+  GC  N +TYNV++ 
Sbjct: 467 AHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQ 526

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
           GF R+ ++ +    +++M   G    A +   +I    E   +V+ +
Sbjct: 527 GFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLINVLKENPSIVDMI 573



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 2/184 (1%)

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           ++  L++A  L  +MV    +P  I ++ +    + M        LF  M   G+  +  
Sbjct: 39  EVSCLDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDS 98

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
              ++ +++  R R++ AF         GI  NV+T+N L+ GL    ++  A  LF  +
Sbjct: 99  ILNIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKL 158

Query: 655 EEEGIL-PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDY 713
             E I  PN+  Y  ++N     G+ ++ L L + M     +PD  T+S +++  L KD 
Sbjct: 159 VREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYS-IVIDALCKDI 217

Query: 714 KVHA 717
            + A
Sbjct: 218 NLDA 221


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 133/440 (30%), Positives = 237/440 (53%), Gaps = 8/440 (1%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE----FGIKPSIVTYNTML 250
           +F+ M+++   P + + NR++  +      +K  +V   +G+     GI+  + T+N ++
Sbjct: 72  LFSDMVKSRPFPSIVDFNRLLSAI----VKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
           + FC   ++  AL +L +M   G  P+ VT   L+ GF R   +  A  L+  M+++G K
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 187

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
               +YN II    +   + +A +  +E+  +G+ P + TY  L+ GLC   R SDA   
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 247

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
             +M++K + P++I+Y+ LL  + ++G + EA  LF+E+   ++ P +VTY++LI+GLC 
Sbjct: 248 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCL 307

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
           +  ++ A Q+ + M+++G L DV++Y  ++NG CK   +    + F EM ++GL  +   
Sbjct: 308 HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVT 367

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           Y T I G  + GD  +A     +M   G  PD+ TYN+L+ GLC  G LE+A  +   M 
Sbjct: 368 YNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ 427

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
                 D +TYT++I    + G +     LF ++  KGL P +VTYT ++     +G L 
Sbjct: 428 KREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLH 487

Query: 611 LAFMYFSEMQVKGIRPNVIT 630
                +++M+ +G+  N  T
Sbjct: 488 EVEALYTKMKQEGLMKNDCT 507



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 133/469 (28%), Positives = 243/469 (51%), Gaps = 15/469 (3%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PSIV +N +L +  K  +    + L  +M+  G   +  T+N++I  F    ++  A  +
Sbjct: 83  PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  MLKLG +    +   ++ G+  +  + +A++L ++MV  G  P +  YN +I  LCK
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
             RV+DA   F E+ RK + P++++Y  L+ G C S    +A  L  ++  + + P V+T
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y+ L+D   + G +  A++L E M+   I PD++TY+ ++NG C    +  A + F+ M+
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            KG   D  +Y T I G  K     +  +L  EM  +G   + +TYN L+ G  + G ++
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           +A E   +M   G  PD  TY  ++    + G+L +   +F +M ++ +   +VTYT +I
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                 G++E A+  F  + +KG++P+++TY  +++GLC    + +   L+  M++EG++
Sbjct: 443 RGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLM 502

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQL 709
            N  T +         G+   +  L K+ML        C ++  LLK +
Sbjct: 503 KNDCTLS--------DGDITLSAELIKKMLS-------CGYAPSLLKDI 536



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 198/376 (52%), Gaps = 12/376 (3%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + +++ V   + + +KM+  G  PD+   N II  L        A + ++ +   GI+P+
Sbjct: 165 FCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPN 224

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +VTY  +++  C      +A  LL +M  +  +PN +TY+ L+  F +NG++ +A+ L  
Sbjct: 225 VVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFE 284

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M+++ +     +Y+ +I G      + EA  + + MV++G    + +YN LI G CK  
Sbjct: 285 EMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAK 344

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           RV D    F EM ++ ++ + ++YNTL+ G+ ++G++ +A   F ++    + P + TYN
Sbjct: 345 RVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN 404

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            L+ GLC  G+LE A  + E+M  + +  D++TYT ++ G CK G +  A   F  +  K
Sbjct: 405 ILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 464

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL--GSLE 540
           GL+PD   YTT ++G    G   E   L  +M  +G          L+   C L  G + 
Sbjct: 465 GLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG----------LMKNDCTLSDGDIT 514

Query: 541 EANELLRKMVGDGFIP 556
            + EL++KM+  G+ P
Sbjct: 515 LSAELIKKMLSCGYAP 530



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 184/378 (48%), Gaps = 35/378 (9%)

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR---------SGNIGEAFLLFDELRSRN 413
           +++DA   F +M++    P I+ +N LL    +          G   E   + ++L + N
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 414 LV--------------------------PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
           +V                          P  VT  +L++G CR   +  A  L + M+  
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
           G  PD++ Y  +++  CK   ++ A +FF E+ RKG++P+   YT  + G       S+A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
            RL  +M+ K   P++ITY+ L+    K G + EA EL  +MV     PD +TY+S+I+ 
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304

Query: 568 SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
                 +     +F+ M+ KG    +V+Y  LI+      R+E     F EM  +G+  N
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYK 687
            +TYN LI G  +   +D+A   F  M+  GI P+ +TY IL+   C+ G  ++AL +++
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424

Query: 688 EMLDREIEPDYCTHSALL 705
           +M  RE++ D  T++ ++
Sbjct: 425 DMQKREMDLDIVTYTTVI 442



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 166/311 (53%)

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
           R   + +A  LF ++      P++V +N L+  + +    +V   L + M   GI  D+ 
Sbjct: 62  RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
           T+ I++N  C    +S+A     +ML+ G +PDR    + + G  +    S+A  L ++M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
           +  G+ PD++ YN ++  LCK   + +A +  +++   G  P+ +TYT++++        
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
                L ++M++K ++P ++TY+ L+ A    G++  A   F EM    I P+++TY++L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           INGLC   RID+A  +F  M  +G L +  +Y  LIN  C A   ++ ++L++EM  R +
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361

Query: 695 EPDYCTHSALL 705
             +  T++ L+
Sbjct: 362 VSNTVTYNTLI 372



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/404 (24%), Positives = 196/404 (48%), Gaps = 35/404 (8%)

Query: 72  AFCNNRWVSDHFQAVVS------DPELLV--RVLNRIREKPRI--ALRFFRWVETQPGVK 121
            FC    VSD    V         P+++    +++ + +  R+  A  FF+ +E + G++
Sbjct: 164 GFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIE-RKGIR 222

Query: 122 RDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLL 181
            +   +  ++     +GL  S+ W        +   +L  +I   ++   ++     LL 
Sbjct: 223 PNVVTYTALV-----NGLCNSSRWS-------DAARLLSDMIKKKITP--NVITYSALLD 268

Query: 182 IYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKP 241
            + K   V +   +F +M+R  + PD+   + +I  L  +    +A +++ +M   G   
Sbjct: 269 AFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLA 328

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
            +V+YNT+++ FCK   +++ ++L  EM  RG   N VTYN LI GF + G++++A+   
Sbjct: 329 DVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFF 388

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
             M   G+     +YN ++ G  + G L +AL + E+M  R +   + TY  +I G+CK 
Sbjct: 389 SQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKT 448

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           G+V +A   F  +  K + PDI++Y T++ G C  G + E   L+ +++   L+    T 
Sbjct: 449 GKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL 508

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
           +         GD+ ++ +L + M++ G  P ++    + +G CK
Sbjct: 509 SD--------GDITLSAELIKKMLSCGYAPSLLKD--IKSGVCK 542


>gi|414878623|tpg|DAA55754.1| TPA: hypothetical protein ZEAMMB73_281441 [Zea mays]
          Length = 891

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 181/683 (26%), Positives = 322/683 (47%), Gaps = 87/683 (12%)

Query: 75  NNRWVSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEIL 134
           +N  +    +++ SD   +V+ L  +R KP +A  +F+   +  G   D   +  I++IL
Sbjct: 58  DNEPIQKWHRSLSSDS--VVQTLRCLRRKPAVAFTYFKDTHSL-GFHHDFSTYSEIIQIL 114

Query: 135 IESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLL 194
             S          +  + V++    ++L+G G      + ++D L          + C  
Sbjct: 115 SHS---------FQGKMLVSL--FREILLGTGSGGPEILPLIDHLR---------KTCAT 154

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI---------VT 245
               M+  G+  DV   +  I  L D G   K    Y M+  + +   I         + 
Sbjct: 155 SHVGMIEMGVKLDVHGFSSFIIGLCDCG---KFDLAYNMVRRYAVLQEISQERVPIEAMA 211

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           YN ++D  CKE +++EA ++L      G +P+  +Y+ LI    + G LE+A   + DM+
Sbjct: 212 YNMVIDGLCKEMKLKEAEKVLEIKTRHGSAPDLYSYSYLIHSHCKMGNLEKAWYHVEDMV 271

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
             G++++ +    ++    + G++ E +   ++    GV      YNI +   CK G ++
Sbjct: 272 SHGIEINCYIVAYLLQCLRKLGMVSEVIVHFQKFRDLGVHLDGVLYNIAMDAYCKLGNMN 331

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
           +A     EM+  +++PD I Y  L+ GYC  G    A+ +F+E+   N+ P VVTYN L 
Sbjct: 332 EAVKLLNEMMAGSLVPDKIHYTCLINGYCLKGETENAWQVFEEMLKANIKPDVVTYNILA 391

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
            G  R G +     + E+M++QG+ P+ +TY I + G C+ GNLS A   FN +  +G+ 
Sbjct: 392 SGYSRNGLVMKVFDILEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEERGID 451

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
                Y + + G L  G T  AY L   +  +G   D ++ + L++GLC+   + EA+ +
Sbjct: 452 NINVLYGSMVCGYLHSGWTDHAYMLFLRVAKQGNMVDRLSCSKLINGLCRDEKVGEASTV 511

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
            + M+    +PD I+Y+ +I A  +  D+   R  F++M+ +GLS  +V YTVL++ +  
Sbjct: 512 CKMMLEKNVVPDVISYSKLISAYCQTRDMHNARLWFHDMVERGLSDVIV-YTVLMNGYCK 570

Query: 606 RGRLELAFMYFSEMQVKGIRPNVIT----------------------------------- 630
            GRL+ A   F +M   GI+P+V+                                    
Sbjct: 571 VGRLQEACELFVQMINLGIKPDVVAYTVLLDGHLKETLQQGWQGIAKERRTFFLRTKHKV 630

Query: 631 ----------------YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
                           Y  LI+G C+   +++A GLF +M  +G++P+ +TYT LIN  C
Sbjct: 631 LLNSMKDMEIEPDVTCYTVLIDGRCKAEYLEEARGLFDEMLAKGLIPDVHTYTALINGYC 690

Query: 675 NAGNWQEALRLYKEMLDREIEPD 697
           + G   +A  L++EM+ + ++PD
Sbjct: 691 SQGEIAKAEDLFQEMIAKGMKPD 713



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 139/466 (29%), Positives = 224/466 (48%), Gaps = 52/466 (11%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  + K   +E+       M+ +G+  +      +++ LR  G   +    ++   + G
Sbjct: 250 LIHSHCKMGNLEKAWYHVEDMVSHGIEINCYIVAYLLQCLRKLGMVSEVIVHFQKFRDLG 309

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           +    V YN  +D++CK G M EA++LL EM      P+ + Y  LI G+   GE E A 
Sbjct: 310 VHLDGVLYNIAMDAYCKLGNMNEAVKLLNEMMAGSLVPDKIHYTCLINGYCLKGETENAW 369

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            +  +MLK  +K    +YN +  GYS  GL+++  ++ E M+ +G+ P   TY I I G 
Sbjct: 370 QVFEEMLKANIKPDVVTYNILASGYSRNGLVMKVFDILEHMMDQGLEPNSLTYGIAIAGF 429

Query: 359 CKWGRVSDAR--------------------------------HRFFEMLR---KNVIPDI 383
           C+ G +S+A                                 H +   LR   +  + D 
Sbjct: 430 CRGGNLSEAEVLFNIVEERGIDNINVLYGSMVCGYLHSGWTDHAYMLFLRVAKQGNMVDR 489

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
           +S + L+ G CR   +GEA  +   +  +N+VP V++Y+ LI   C+  D+  A+    +
Sbjct: 490 LSCSKLINGLCRDEKVGEASTVCKMMLEKNVVPDVISYSKLISAYCQTRDMHNARLWFHD 549

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK--- 500
           M+ +G L DVI YT+++NG CK+G L  A E F +M+  G++PD  AYT  + G LK   
Sbjct: 550 MVERG-LSDVIVYTVLMNGYCKVGRLQEACELFVQMINLGIKPDVVAYTVLLDGHLKETL 608

Query: 501 ----LGDTSEA----YRLQEEMLAKGFP-----PDLITYNVLVHGLCKLGSLEEANELLR 547
                G   E      R + ++L          PD+  Y VL+ G CK   LEEA  L  
Sbjct: 609 QQGWQGIAKERRTFFLRTKHKVLLNSMKDMEIEPDVTCYTVLIDGRCKAEYLEEARGLFD 668

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
           +M+  G IPD  TYT++I+     G++ +  DLF  M+ KG+ P +
Sbjct: 669 EMLAKGLIPDVHTYTALINGYCSQGEIAKAEDLFQEMIAKGMKPDI 714



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 143/303 (47%), Gaps = 6/303 (1%)

Query: 421 YNTLIDGLCRYGDLEVAQQLKENM-----INQGILP-DVITYTIMVNGSCKMGNLSMARE 474
           +++ I GLC  G  ++A  +         I+Q  +P + + Y ++++G CK   L  A +
Sbjct: 171 FSSFIIGLCDCGKFDLAYNMVRRYAVLQEISQERVPIEAMAYNMVIDGLCKEMKLKEAEK 230

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
                 R G  PD ++Y+  I    K+G+  +A+   E+M++ G   +      L+  L 
Sbjct: 231 VLEIKTRHGSAPDLYSYSYLIHSHCKMGNLEKAWYHVEDMVSHGIEINCYIVAYLLQCLR 290

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           KLG + E     +K    G   D + Y   + A  ++G++     L N M+   L P  +
Sbjct: 291 KLGMVSEVIVHFQKFRDLGVHLDGVLYNIAMDAYCKLGNMNEAVKLLNEMMAGSLVPDKI 350

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
            YT LI+ +  +G  E A+  F EM    I+P+V+TYN L +G  R   + + + +   M
Sbjct: 351 HYTCLINGYCLKGETENAWQVFEEMLKANIKPDVVTYNILASGYSRNGLVMKVFDILEHM 410

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYK 714
            ++G+ PN  TY I I   C  GN  EA  L+  + +R I+     + +++   L   + 
Sbjct: 411 MDQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEERGIDNINVLYGSMVCGYLHSGWT 470

Query: 715 VHA 717
            HA
Sbjct: 471 DHA 473



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 17/207 (8%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V   ML   ++PDV + +++I           AR  +  M E G+   ++ Y  +++ +C
Sbjct: 511 VCKMMLEKNVVPDVISYSKLISAYCQTRDMHNARLWFHDMVERGLS-DVIVYTVLMNGYC 569

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG--------------- 299
           K G +QEA EL  +M   G  P+ V Y VL+ G  +    +  +G               
Sbjct: 570 KVGRLQEACELFVQMINLGIKPDVVAYTVLLDGHLKETLQQGWQGIAKERRTFFLRTKHK 629

Query: 300 -LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L+  M  + ++     Y  +I G  +   L EA  L +EM+ +G+ P + TY  LI G 
Sbjct: 630 VLLNSMKDMEIEPDVTCYTVLIDGRCKAEYLEEARGLFDEMLAKGLIPDVHTYTALINGY 689

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIIS 385
           C  G ++ A   F EM+ K + PDI S
Sbjct: 690 CSQGEIAKAEDLFQEMIAKGMKPDIWS 716


>gi|224144893|ref|XP_002325452.1| predicted protein [Populus trichocarpa]
 gi|222862327|gb|EEE99833.1| predicted protein [Populus trichocarpa]
          Length = 864

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 148/506 (29%), Positives = 248/506 (49%), Gaps = 36/506 (7%)

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
           G   ++P++VTY T++ ++CK+  + EAL L  EM   G  P+ VTY+ +I G  + G L
Sbjct: 148 GTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEMISDGFLPDVVTYSSIINGLCKRGML 207

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
            +A+ L+R+M K+G+  +   Y  ++    + G   E+   + +M+  GV+  L     L
Sbjct: 208 TEAKALLREMDKMGVNPNHVVYAILVDSLFKAGSAWESFIYQSQMIVCGVSFDLVVCTTL 267

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           I GL K G+  +A   F  + + N IP+ I+Y  ++ GYC+ G++  A  L  ++  + +
Sbjct: 268 IDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQV 327

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
           VP VVTY+++I+G  + G L+VA ++ + M++Q I+P+   Y  +++G  K G    A +
Sbjct: 328 VPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVD 387

Query: 475 FFNE-----------------------------------MLRKGLQPDRFAYTTQIAGEL 499
            +NE                                   M+ KGL  DR  YT+ + G  
Sbjct: 388 LYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFF 447

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           K G  S A+ + E+M   G   D++ YNVL++GL +LG   +A  +   +   G  PD  
Sbjct: 448 KTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGKY-DAESVYSGIRELGLAPDRA 506

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
           TY ++I+A  + G L     L+N M    + P  +T  +L+   +  G  E A    +EM
Sbjct: 507 TYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERAIDVLNEM 566

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
            + GI PNV  + AL+N   +  R D    +   +   G+  N+  Y  LI   C  G  
Sbjct: 567 LLWGICPNVTIHRALLNACSKCERADTILQMHKRLVGMGLKANREVYNSLITVLCGLGMT 626

Query: 680 QEALRLYKEMLDREIEPDYCTHSALL 705
           + A  +   M    I  D  T++AL+
Sbjct: 627 KRATLVLNNMTKEGISADTVTYNALI 652



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 172/662 (25%), Positives = 303/662 (45%), Gaps = 85/662 (12%)

Query: 120 VKRDEFVFCTILEILIES----GLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKI 175
           VK+D F       IL++     G ++   WV        M  ++D +     ++ +   +
Sbjct: 105 VKKDTFFDSFTCNILVKGFCRIGSVKYGEWV--------MDNLIDDMNDDDGTTNLEPNL 156

Query: 176 LDLLLLI--YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRM 233
           +    LI  Y K+  + + L ++ +M+ +G LPDV   + II  L   G   +A+ + R 
Sbjct: 157 VTYTTLISAYCKQHGLSEALSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLRE 216

Query: 234 MGEFGIKPSIVTY-----------------------------------NTMLDSFCKEGE 258
           M + G+ P+ V Y                                    T++D   K G+
Sbjct: 217 MDKMGVNPNHVVYAILVDSLFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGK 276

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
             EA  +   +    C PN +TY  +I G+ + G+++ A  L+RDM K  +  +  +Y+ 
Sbjct: 277 SDEAEAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSS 336

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR--------------- 363
           II GY++KG+L  A+ + ++M+ + + P    Y  LI G  K G+               
Sbjct: 337 IINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNG 396

Query: 364 ------VSDA------RHRFFE--------MLRKNVIPDIISYNTLLYGYCRSGNIGEAF 403
                 + DA      R R  E        M+ K ++ D ++Y +L+ G+ ++G    AF
Sbjct: 397 LEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAF 456

Query: 404 LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
            + +++    +   VV YN LI+GL R G  + A+ +   +   G+ PD  TY  M+N  
Sbjct: 457 TMAEKMAETGIKFDVVAYNVLINGLLRLGKYD-AESVYSGIRELGLAPDRATYNTMINAY 515

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
           CK G L  A + +NEM    + P+       + G  K G+T  A  +  EML  G  P++
Sbjct: 516 CKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICPNV 575

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
             +  L++   K    +   ++ +++VG G   +   Y S+I     +G  +R   + NN
Sbjct: 576 TIHRALLNACSKCERADTILQMHKRLVGMGLKANREVYNSLITVLCGLGMTKRATLVLNN 635

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           M ++G+S   VTY  LIH H     +E A   +++M  +G+ P + TYN L+ GL     
Sbjct: 636 MTKEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSPGIRTYNLLLGGLLAAGL 695

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSA 703
           + +AY +   M++ G+ P+   Y  LI+ +   GN +EA++ Y EM+ + + P   T++ 
Sbjct: 696 MSKAYEILSKMKDSGLDPDASLYNTLISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTYNV 755

Query: 704 LL 705
           L+
Sbjct: 756 LI 757



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 159/577 (27%), Positives = 270/577 (46%), Gaps = 47/577 (8%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           ++ + + L+  +    +V Q   ++++ML  G+LP+V   N ++      G    A ++ 
Sbjct: 10  TLPLWNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGHLSLALDLI 69

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
           R      I    VTYNT +  FC++G   +    L  M  +    +  T N+L+ GF R 
Sbjct: 70  R---NVDIDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGFCRI 126

Query: 292 GELEQAR----GLIRDMLK----LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG 343
           G ++        LI DM        L+ +  +Y  +I  Y ++  L EAL+L EEM++ G
Sbjct: 127 GSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEMISDG 186

Query: 344 VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP---------------------- 381
             P + TY+ +I GLCK G +++A+    EM +  V P                      
Sbjct: 187 FLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAGSAWESF 246

Query: 382 -------------DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
                        D++   TL+ G  ++G   EA  +F  L   N +P  +TY  +IDG 
Sbjct: 247 IYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDGY 306

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ GD++ A+ L  +M  + ++P+V+TY+ ++NG  K G L +A     +ML + + P+ 
Sbjct: 307 CKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNA 366

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
           + Y T I G LK G    A  L  EM   G   +    +  ++ L +   +EEA  L + 
Sbjct: 367 YIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAEGLCKY 426

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M+  G + D + YTS++    + G       +   M   G+   +V Y VLI+     G+
Sbjct: 427 MMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGK 486

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
            +   +Y S ++  G+ P+  TYN +IN  C+  +++ A  L+ +M+   ++PN  T  I
Sbjct: 487 YDAESVY-SGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNI 545

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           L+     AG  + A+ +  EML   I P+   H ALL
Sbjct: 546 LVGGLSKAGETERAIDVLNEMLLWGICPNVTIHRALL 582



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 150/547 (27%), Positives = 255/547 (46%), Gaps = 51/547 (9%)

Query: 204 LLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEAL 263
           ++P +   NR+I      G   +  ++Y  M   G+ P++ T+N ++ ++CK G +  AL
Sbjct: 7   IVPTLPLWNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGHLSLAL 66

Query: 264 ELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGY 323
           +L+  +       + VTYN  I GF + G   Q  G +  M+K      + + N ++ G+
Sbjct: 67  DLIRNVD---IDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGF 123

Query: 324 SEKGL----------LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
              G           L++ +N ++   T  + P L TY  LI   CK   +S+A   + E
Sbjct: 124 CRIGSVKYGEWVMDNLIDDMNDDDG--TTNLEPNLVTYTTLISAYCKQHGLSEALSLYEE 181

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M+    +PD+++Y++++ G C+ G + EA  L  E+    + P  V Y  L+D L + G 
Sbjct: 182 MISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAGS 241

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
              +   +  MI  G+  D++  T +++G  K G    A   F  + +    P+   YT 
Sbjct: 242 AWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTA 301

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            I G  KLGD   A  L  +M  K   P+++TY+ +++G  K G L+ A  +++KM+   
Sbjct: 302 MIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQN 361

Query: 554 FIPDHITYTSIIHASLEMG-----------------------------DLRRGRD----- 579
            +P+   Y ++I   L+ G                             +L+RGR      
Sbjct: 362 IMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAE 421

Query: 580 -LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
            L   M+ KGL    V YT L+      GR   AF    +M   GI+ +V+ YN LINGL
Sbjct: 422 GLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGL 481

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
            RL + D A  ++  + E G+ P++ TY  +IN  C  G  + A++L+ EM    + P+ 
Sbjct: 482 LRLGKYD-AESVYSGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNS 540

Query: 699 CTHSALL 705
            T + L+
Sbjct: 541 ITCNILV 547



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 138/490 (28%), Positives = 232/490 (47%), Gaps = 1/490 (0%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           M +  ++P+V   + II      G    A  + + M +  I P+   Y T++D   K G+
Sbjct: 322 MEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGK 381

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
              A++L  EM+  G   N    +  I    R  ++E+A GL + M+  GL +   +Y  
Sbjct: 382 QDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTS 441

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           ++ G+ + G    A  + E+M   G+   +  YN+LI GL + G+  DA   +  +    
Sbjct: 442 LMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGKY-DAESVYSGIRELG 500

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
           + PD  +YNT++  YC+ G +  A  L++E++  +++P  +T N L+ GL + G+ E A 
Sbjct: 501 LAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERAI 560

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
            +   M+  GI P+V  +  ++N   K        +    ++  GL+ +R  Y + I   
Sbjct: 561 DVLNEMLLWGICPNVTIHRALLNACSKCERADTILQMHKRLVGMGLKANREVYNSLITVL 620

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
             LG T  A  +   M  +G   D +TYN L+HG  K   +E+A     +M+ +G  P  
Sbjct: 621 CGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSPGI 680

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
            TY  ++   L  G + +  ++ + M   GL P    Y  LI  H   G  + A  ++ E
Sbjct: 681 RTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKIGNKKEAIKFYCE 740

Query: 619 MQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGN 678
           M  KG+ P   TYN LI    ++ ++DQA  L  +M+   + PN  TY ILI   CN   
Sbjct: 741 MVTKGLVPKTSTYNVLIEDFAKVGKMDQARELLNEMQVRRVPPNSSTYDILICGWCNLSK 800

Query: 679 WQEALRLYKE 688
             E  R+ K+
Sbjct: 801 QPELDRISKK 810



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/394 (31%), Positives = 198/394 (50%), Gaps = 11/394 (2%)

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
           T  + PTL  +N LIY     G VS     + EML   V+P++ ++N L++ +C+ G++ 
Sbjct: 4   THHIVPTLPLWNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGHLS 63

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
              L  D +R+ ++    VTYNT I G C+ G           M+ +    D  T  I+V
Sbjct: 64  ---LALDLIRNVDIDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILV 120

Query: 461 NGSCKMGNLSMAREFFNEML--------RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
            G C++G++       + ++           L+P+   YTT I+   K    SEA  L E
Sbjct: 121 KGFCRIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYE 180

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           EM++ GF PD++TY+ +++GLCK G L EA  LLR+M   G  P+H+ Y  ++ +  + G
Sbjct: 181 EMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAG 240

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
                    + M+  G+S  LV  T LI      G+ + A   F  +      PN ITY 
Sbjct: 241 SAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYT 300

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
           A+I+G C+L  +D A  L  DME++ ++PN  TY+ +IN     G    A+R+ K+MLD+
Sbjct: 301 AMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQ 360

Query: 693 EIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
            I P+   ++ L+   L    +  AV+    + L
Sbjct: 361 NIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKL 394



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 133/287 (46%), Gaps = 12/287 (4%)

Query: 170 CVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE 229
           C ++ I   LL   +K    +  L +  +++  GL  + +  N +I VL   G + +A  
Sbjct: 572 CPNVTIHRALLNACSKCERADTILQMHKRLVGMGLKANREVYNSLITVLCGLGMTKRATL 631

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           V   M + GI    VTYN ++    K   +++AL    +M   G SP   TYN+L+ G  
Sbjct: 632 VLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSPGIRTYNLLLGGLL 691

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
             G + +A  ++  M   GL   A  YN +I G+ + G   EA+    EMVT+G+ P  +
Sbjct: 692 AAGLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKIGNKKEAIKFYCEMVTKGLVPKTS 751

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC------------RSG 397
           TYN+LI    K G++  AR    EM  + V P+  +Y+ L+ G+C            +  
Sbjct: 752 TYNVLIEDFAKVGKMDQARELLNEMQVRRVPPNSSTYDILICGWCNLSKQPELDRISKKT 811

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
              EA  LF E+  +  VP   T   +     R G +  A+ + ++M
Sbjct: 812 YRTEARTLFAEMNEKGFVPCENTLACISSTFARPGMVVDAKHMLKDM 858



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 120/263 (45%), Gaps = 14/263 (5%)

Query: 162 LIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDN 221
           L+G GL +  + ++ + L+ +     M ++  LV N M + G+  D    N +I     +
Sbjct: 601 LVGMGLKA--NREVYNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKS 658

Query: 222 GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY 281
               KA   Y  M   G+ P I TYN +L      G M +A E+L +M+  G  P+   Y
Sbjct: 659 SHIEKALATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLY 718

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
           N LI+G  + G  ++A     +M+  GL     +YN +I  +++ G + +A  L  EM  
Sbjct: 719 NTLISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTYNVLIEDFAKVGKMDQARELLNEMQV 778

Query: 342 RGVAPTLATYNILIYGLCKWGRV------------SDARHRFFEMLRKNVIPDIISYNTL 389
           R V P  +TY+ILI G C   +             ++AR  F EM  K  +P   +   +
Sbjct: 779 RRVPPNSSTYDILICGWCNLSKQPELDRISKKTYRTEARTLFAEMNEKGFVPCENTLACI 838

Query: 390 LYGYCRSGNIGEAFLLFDELRSR 412
              + R G + +A  +  ++  R
Sbjct: 839 SSTFARPGMVVDAKHMLKDMYKR 861


>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 988

 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 186/692 (26%), Positives = 305/692 (44%), Gaps = 81/692 (11%)

Query: 92  LLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVV 151
           L++ VL R+ E+P   + FF W   Q G K    V+  ++++++     +    +++ + 
Sbjct: 134 LVIEVL-RLIERPSAVISFFVWAGRQIGYKHTSPVYNALVDLIVRDDDEKVPEELLQQIR 192

Query: 152 CVNMH---GILDVLIGGGL-SSCVSIKILDLLLLI---YTKKSMVEQCLLVFNKMLRNGL 204
             +       L+VL+     S   SI + +L  L    +        CL+     L+   
Sbjct: 193 DDDKEVFGEFLNVLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLI--QAFLKADC 250

Query: 205 LPDVKNCNRIIKV--LRDNGFSV-----------KAREVYRMMGEFGIKPSIVTYNTMLD 251
           L      +R + +  LR +GF++           K RE   +M      P  V Y  ++ 
Sbjct: 251 LDSASLVHREMSLANLRMDGFTLRCYAYSLCKVGKWREALTLMETENFVPDTVFYTKLIS 310

Query: 252 SFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKV 311
             C+    +EA++ L  M+   C PN VTY+ L+ G     +L + + ++  M+  G   
Sbjct: 311 GLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYP 370

Query: 312 SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC------KWGRVS 365
           S   +N ++  Y   G    A  L ++MV  G  P    YNILI  +C          + 
Sbjct: 371 SPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLE 430

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
            A   + EML   V+ + I+ ++     C +G   +AF +  E+  +  +P   TY+ ++
Sbjct: 431 LAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVL 490

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
             LC    +E+A  L E M   G++ DV TYTIMV+  CK G +  AR++FNEM   G  
Sbjct: 491 GYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCT 550

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           P+   YT  I   LK    S A  L E ML++G  P+++TY+ L+ G CK G +E+A ++
Sbjct: 551 PNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQI 610

Query: 546 LRKMVG-------------------------------DGFI------------------- 555
             +M G                               DGF                    
Sbjct: 611 FERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEG 670

Query: 556 --PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
             P+ I Y ++I    ++G L   +++   M   G   TL TY+ LI  +    R +LA 
Sbjct: 671 CEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 730

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
              S+M      PNV+ Y  +I+GLC++ + D+AY L   MEE+G  PN  TYT +I+  
Sbjct: 731 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 790

Query: 674 CNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
              G  +  L L + M  + + P+Y T+  L+
Sbjct: 791 GRIGKIETCLELLERMGSKGVAPNYVTYRVLI 822



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 186/689 (26%), Positives = 301/689 (43%), Gaps = 75/689 (10%)

Query: 57  YYKELIISTVE----EKPWAFCNNRWVSDHFQAVVSDPELLVRVLNRIR-EKPRIALRFF 111
           +Y +LI    E    E+   F N    +     VV+   LL   LN+ +  + +  L   
Sbjct: 304 FYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMM 363

Query: 112 RWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVV-CVNMHG--ILDVLIGGGLS 168
                 P  K    +F +++     SG    AY +++ +V C +  G  + ++LIG   S
Sbjct: 364 MMEGCYPSPK----IFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIG---S 416

Query: 169 SCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR 228
            C     L   LL   +K+        +++ML  G++ +  N +   + L   G   KA 
Sbjct: 417 ICGDKDSLSCHLLELAEKA--------YSEMLATGVVLNKINVSSFTRCLCSAGKYEKAF 468

Query: 229 EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
            V R M   G  P   TY+ +L   C   +M+ A  L  EM+  G   +  TY +++  F
Sbjct: 469 SVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSF 528

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
            + G +EQAR    +M ++G   +  +Y  +I  Y +   +  A  L E M++ G  P +
Sbjct: 529 CKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNI 588

Query: 349 ATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI-----------------ISYNTLLY 391
            TY+ LI G CK G++  A   F  M     +PD+                 + Y  LL 
Sbjct: 589 VTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLD 648

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
           G+C+   + EA  L D +      P  + Y+ LIDGLC+ G L+ AQ++K  M   G   
Sbjct: 649 GFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPA 708

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
            + TY+ +++   K+    +A +  ++ML     P+   YT  I G  K+G T EAY+L 
Sbjct: 709 TLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLM 768

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
           + M  KG  P+++TY  ++ G  ++G +E   ELL +M   G  P+++TY  +I    + 
Sbjct: 769 QMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKN 828

Query: 572 GDLRRGRDLFNNM-----------LRK-------------GL---------SPTLVTYTV 598
           G L    +L   M            RK             GL         +P L  Y +
Sbjct: 829 GALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSLYRL 888

Query: 599 LIHAHAARGRLELAFMYFSEMQV--KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
           L+       RLE+A     E+      +     TYN+LI  LC   ++D+A+ LF +M +
Sbjct: 889 LVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSK 948

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRL 685
           +G++P   T+  LI          EAL L
Sbjct: 949 KGVIPEMQTFCSLIKGLFRNSKISEALLL 977



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 134/483 (27%), Positives = 223/483 (46%), Gaps = 13/483 (2%)

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
           + G K +   YN ++D   ++ + +   ELL +++       G   NVL+  + R+G   
Sbjct: 158 QIGYKHTSPVYNALVDLIVRDDDEKVPEELLQQIRDDDKEVFGEFLNVLVRKYCRSGSFS 217

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
            A   +  +     + S  +YN +I  + +   L  A  +  EM    +     T     
Sbjct: 218 IALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYA 277

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
           Y LCK G+    R     M  +N +PD + Y  L+ G C +    EA    + +R+ + +
Sbjct: 278 YSLCKVGK---WREALTLMETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCL 334

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P VVTY+TL+ G      L   +++   M+ +G  P    +  +V+  C  G+ S A + 
Sbjct: 335 PNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKL 394

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ------EEMLAKGFPPDLITYNVL 529
             +M++ G  P    Y   I       D+   + L+       EMLA G   + I  +  
Sbjct: 395 LKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSF 454

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
              LC  G  E+A  ++R+M+G GFIPD  TY+ ++        +     LF  M R GL
Sbjct: 455 TRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGL 514

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
              + TYT+++ +    G +E A  +F+EM+  G  PNV+TY ALI+   + +++  A  
Sbjct: 515 VADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANE 574

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQL 709
           LF  M  EG LPN  TY+ LI+ +C AG  ++A ++++ M   +  PD      +  KQ 
Sbjct: 575 LFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDV----DMYFKQY 630

Query: 710 DKD 712
           D D
Sbjct: 631 DDD 633



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 169/379 (44%), Gaps = 9/379 (2%)

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           N+L+   C+ G  S A      +      P   +YN L+  + ++  +  A L+  E+  
Sbjct: 204 NVLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSL 263

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
            NL     T       LC+ G    A  L E    +  +PD + YT +++G C+      
Sbjct: 264 ANLRMDGFTLRCYAYSLCKVGKWREALTLMET---ENFVPDTVFYTKLISGLCEASLFEE 320

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A +F N M      P+   Y+T + G L         R+   M+ +G  P    +N LVH
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA------SLEMGDLRRGRDLFNNML 585
             C  G    A +LL+KMV  G  P ++ Y  +I +      SL    L      ++ ML
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEML 440

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
             G+    +  +       + G+ E AF    EM  +G  P+  TY+ ++  LC   +++
Sbjct: 441 ATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKME 500

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            A+ LF +M+  G++ + YTYTI+++  C AG  ++A + + EM +    P+  T++AL+
Sbjct: 501 LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560

Query: 706 LKQLDKDYKVHAVEYLESL 724
              L      +A E  E++
Sbjct: 561 HAYLKAKKVSYANELFETM 579



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 128/519 (24%), Positives = 214/519 (41%), Gaps = 73/519 (14%)

Query: 84  QAVVSDPELLVRVLNRIREKPRIALRFFRWVETQ-PGVKRDEFVFCTILEILIESGLLRS 142
           Q  + D     +VL  +    ++ L F  + E +  G+  D + +  +++   ++GL+  
Sbjct: 477 QGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQ 536

Query: 143 A-YWVVET--VVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKM 199
           A  W  E   V C                   ++     L+  Y K   V     +F  M
Sbjct: 537 ARKWFNEMREVGCTP-----------------NVVTYTALIHAYLKAKKVSYANELFETM 579

Query: 200 LRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMGEFGI----------------KPS 242
           L  G LP++   + +I      G   KA +++ RM G   +                +P+
Sbjct: 580 LSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPN 639

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +V Y  +LD FCK   ++EA +LL  M   GC PN + Y+ LI G  + G+L++A+ +  
Sbjct: 640 VVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKA 699

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M + G   + ++Y+ +I  Y +      A  +  +M+    AP +  Y  +I GLCK G
Sbjct: 700 EMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG 759

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           +  +A      M  K   P++++Y  ++ G+ R G I     L + + S+ + P  VTY 
Sbjct: 760 KTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYR 819

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQ------------------------GIL-------- 450
            LID  C+ G L+VA  L E M                           G+L        
Sbjct: 820 VLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNKEFIESLGLLDEIGQDDT 879

Query: 451 -PDVITYTIMVNGSCKMGNLSMAREFFNEM--LRKGLQPDRFAYTTQIAGELKLGDTSEA 507
            P +  Y ++V+   K   L MA     E+      L      Y + I          +A
Sbjct: 880 APFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVDKA 939

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
           +RL  EM  KG  P++ T+  L+ GL +   + EA  LL
Sbjct: 940 FRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLL 978



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 121/250 (48%), Gaps = 39/250 (15%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V +KML N   P+V     +I  L   G + +A ++ +MM E G +P++VTY  M+D F 
Sbjct: 732 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 791

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           + G+++  LELL  M  +G +PN VTY VLI    +NG L+ A  L+ +M +      A 
Sbjct: 792 RIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAA 851

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA------------------------- 349
            Y  +I G++++   +E+L L +E+     AP L+                         
Sbjct: 852 GYRKVIEGFNKE--FIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEV 909

Query: 350 ------------TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
                       TYN LI  LC   +V  A   F EM +K VIP++ ++ +L+ G  R+ 
Sbjct: 910 ATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNS 969

Query: 398 NIGEAFLLFD 407
            I EA LL D
Sbjct: 970 KISEALLLLD 979


>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 144/450 (32%), Positives = 233/450 (51%), Gaps = 2/450 (0%)

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           I+ +N +L S  K       + L  +M  +G   N VT ++LI  F   G++  +  L+ 
Sbjct: 10  IIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLG 69

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            +LKLG   +  ++  ++ G   KG + + L+  +++V +       +Y  L+ GLCK G
Sbjct: 70  KILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTG 129

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
               A      +  ++  P+++ Y+ ++ G C+   + EA+ L+ E+ +R + P V+TYN
Sbjct: 130 ETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYN 189

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           TLI   C  G L  A  L   MI + I PDV T++I+++  CK G    A++ F+ M++ 
Sbjct: 190 TLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG--KNAKQIFHAMVQM 247

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G+ P+ ++Y   I G  K     EA  L  EML K   PD +TYN L+ GLCK G +  A
Sbjct: 248 GVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSA 307

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             L+ +M   G   D +TYTS++ A  +  +L +   LF  M  +G+ PT+ TYT LI  
Sbjct: 308 LNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDG 367

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
               GRL+ A   F  + VKG   +V TY  +I+GLC+    D+A  +   ME+ G +PN
Sbjct: 368 LCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPN 427

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDR 692
             T+ I+I          +A +L  EM+ +
Sbjct: 428 AVTFEIIIRSLFEKDENDKAEKLLHEMIAK 457



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 139/449 (30%), Positives = 231/449 (51%), Gaps = 2/449 (0%)

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
           N+I+  L    + +    + + M   GI+ ++VT + +++ FC  G+M  +  LL ++  
Sbjct: 14  NKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILK 73

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
            G  PN +T+  L+ G    GE+++       ++    + +  SY  ++ G  + G    
Sbjct: 74  LGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRC 133

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
           A+ L   +  R   P +  Y+ +I GLCK   V++A   + EM  + + P++I+YNTL+ 
Sbjct: 134 AIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLIC 193

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
            +C +G +  AF L  E+  +N+ P V T++ LID LC+ G  + A+Q+   M+  G+ P
Sbjct: 194 AFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG--KNAKQIFHAMVQMGVNP 251

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           +V +Y IM+NG CK   +  A     EML K + PD   Y + I G  K G  + A  L 
Sbjct: 252 NVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLM 311

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
            EM  +G P D++TY  L+  LCK  +L++A  L  KM   G  P   TYT++I    + 
Sbjct: 312 NEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKG 371

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
           G L+  ++LF ++L KG    + TYTV+I      G  + A    S+M+  G  PN +T+
Sbjct: 372 GRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTF 431

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGIL 660
             +I  L      D+A  L  +M  +G+L
Sbjct: 432 EIIIRSLFEKDENDKAEKLLHEMIAKGLL 460



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 131/395 (33%), Positives = 212/395 (53%), Gaps = 2/395 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +  K+L+ G  P+      ++K L   G   K    +  +     + + V+Y T+L+  C
Sbjct: 67  LLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLC 126

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K GE + A++LL  ++ R   PN V Y+ +I G  ++  + +A  L  +M    +  +  
Sbjct: 127 KTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVI 186

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +YN +IC +   G L+ A +L  EM+ + + P + T++ILI  LCK G+  +A+  F  M
Sbjct: 187 TYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAM 244

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           ++  V P++ SYN ++ G C+   + EA  L  E+  +N+VP  VTYN+LIDGLC+ G +
Sbjct: 245 VQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRI 304

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
             A  L   M ++G   DV+TYT +++  CK  NL  A   F +M  +G+QP  + YT  
Sbjct: 305 TSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTAL 364

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I G  K G    A  L + +L KG   D+ TY V++ GLCK G  +EA  +  KM  +G 
Sbjct: 365 IDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGC 424

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           IP+ +T+  II +  E  +  +   L + M+ KGL
Sbjct: 425 IPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 459



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 92/192 (47%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V++ + +  +ML   ++PD    N +I  L  +G    A  +   M   G    +VTY +
Sbjct: 269 VDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTS 328

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +LD+ CK   + +A  L  +M+ RG  P   TY  LI G  + G L+ A+ L + +L  G
Sbjct: 329 LLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKG 388

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
             +   +Y  +I G  ++G+  EAL ++ +M   G  P   T+ I+I  L +      A 
Sbjct: 389 CCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAE 448

Query: 369 HRFFEMLRKNVI 380
               EM+ K ++
Sbjct: 449 KLLHEMIAKGLL 460



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 85/183 (46%)

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
           +I +N ++  L KL        L ++M   G   + +T + +I+    +G +     L  
Sbjct: 10  IIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLG 69

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
            +L+ G  P  +T+T L+     +G ++    +  ++  +  + N ++Y  L+NGLC+  
Sbjct: 70  KILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTG 129

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
               A  L   +E+    PN   Y+ +I+  C      EA  LY EM  REI P+  T++
Sbjct: 130 ETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYN 189

Query: 703 ALL 705
            L+
Sbjct: 190 TLI 192


>gi|299471515|emb|CBN80001.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 687

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 157/544 (28%), Positives = 256/544 (47%), Gaps = 6/544 (1%)

Query: 164 GGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGF 223
           GG   S V +K +    L+  K       L   ++   +G   D  + N  I    +   
Sbjct: 70  GGKPKSLVKLKSI----LLEAKGRDWRTALAALDEFKISGGSLDTTSYNIAIAACSNGRQ 125

Query: 224 SVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG--RGCSPNGVTY 281
              A  + R M   G+ P +VTYN+ + +  K G  +EA++LL +M     G +P+ VTY
Sbjct: 126 WATAVRLLREMPTEGVTPDVVTYNSAIAACSKGGRWKEAMDLLTQMVAPTEGITPDVVTY 185

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
           N  I   S  G  ++A  L+  M+  G+  +  +YN  I   ++     EA++L EE++ 
Sbjct: 186 NSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIE 245

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
           +G  P+  TYN +I    K GR  +A     +ML  ++  D+ISY++++    R     E
Sbjct: 246 QGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKE 305

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           A  L +++R++ + P V++YN+ ID   +    + A  L   M   G++P VI+Y     
Sbjct: 306 AMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATA 365

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
                G    A E   EM  +G+ P+  +Y + +    K G   +A +L   M   G  P
Sbjct: 366 ACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDP 425

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           D+I++N  +    +    E A ELLR+M   G  P+ ITY S I A       +    LF
Sbjct: 426 DIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLF 485

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
             M  +GLSP +VTY  +I A A   + ELA    + M  +G+ P+VI+YN+ I    + 
Sbjct: 486 REMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKG 545

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
            + + A  L   M   G  P+  +Y   +     +G W+EAL L K+M    + P+  ++
Sbjct: 546 EQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNTVSY 605

Query: 702 SALL 705
            A +
Sbjct: 606 GAAI 609



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 141/499 (28%), Positives = 232/499 (46%)

Query: 203 GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           G+ PDV   N  I    + G   +A ++   M   G+ P+++TYN+ + +  K    +EA
Sbjct: 177 GITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEA 236

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
           ++LL E+  +G  P+  TYN +I   ++ G   +A  L+  ML   +     SY+ +I  
Sbjct: 237 MDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAA 296

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
                   EA++L E+M T+GV+P + +YN  I    K  R  +A     EM    ++P 
Sbjct: 297 CGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPT 356

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
           +ISYN+       +G   EA  L  E+ ++ + P  ++YN+ +D   + G  E A +L  
Sbjct: 357 VISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLR 416

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            M   G  PD+I++   ++   +      A E   EM   GL P+   Y + I    +  
Sbjct: 417 GMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSA 476

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
              EA  L  EM  +G  P+++TYN ++    K    E A +LL  M   G  PD I+Y 
Sbjct: 477 RWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYN 536

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
           S I A  +         L   M  +G  P +++Y   + A A  GR   A     +M   
Sbjct: 537 SAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMATV 596

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
           G+ PN ++Y A I+   +  + D A  +  +M+  G  PN  TY+  I+     G W+EA
Sbjct: 597 GLTPNTVSYGAAIHACGKGEQWDVAVRILKEMQTHGATPNLITYSAAIDACAKQGRWKEA 656

Query: 683 LRLYKEMLDREIEPDYCTH 701
           + L  ++  + + PD  T+
Sbjct: 657 VDLLTDLRRQGLTPDAQTY 675



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 125/451 (27%), Positives = 216/451 (47%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           E+ + +  +++  G  P  +  N +I      G  ++A ++   M    I   +++Y+++
Sbjct: 234 EEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSV 293

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           + +  +    +EA++LL +M+ +G SPN ++YN  I   ++    ++A  L+R+M  +GL
Sbjct: 294 IAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGL 353

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
             +  SYN      +  G  VEAL L +EM  +G+AP   +YN  +    K G+   A  
Sbjct: 354 VPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVK 413

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
               M      PDIIS+N+ +    R      A  L  E+ +  L P V+TYN+ I+   
Sbjct: 414 LLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACG 473

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
           R    + A  L   M  +G+ P+V+TY  M++   K     +A +    M  +G+ PD  
Sbjct: 474 RSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVI 533

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
           +Y + I    K      A +L + M  +G  PD+I+YN  V    K G   EA  LL+ M
Sbjct: 534 SYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDM 593

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRL 609
              G  P+ ++Y + IHA  +         +   M   G +P L+TY+  I A A +GR 
Sbjct: 594 ATVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEMQTHGATPNLITYSAAIDACAKQGRW 653

Query: 610 ELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
           + A    ++++ +G+ P+  TY  +I+   R
Sbjct: 654 KEAVDLLTDLRRQGLTPDAQTYLTVISAFQR 684



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 108/226 (47%), Gaps = 2/226 (0%)

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
           +G +P        I  E K  D   A    +E    G   D  +YN+ +           
Sbjct: 69  RGGKPKSLVKLKSILLEAKGRDWRTALAALDEFKISGGSLDTTSYNIAIAACSNGRQWAT 128

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML--RKGLSPTLVTYTVL 599
           A  LLR+M  +G  PD +TY S I A  + G  +   DL   M+   +G++P +VTY   
Sbjct: 129 AVRLLREMPTEGVTPDVVTYNSAIAACSKGGRWKEAMDLLTQMVAPTEGITPDVVTYNSA 188

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           I A +  GR + A     +M  +G+ PN+ITYN+ I    + RR ++A  L  ++ E+G 
Sbjct: 189 IAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGF 248

Query: 660 LPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            P+  TY  +I+     G W EA+ L  +ML  +I  D  ++S+++
Sbjct: 249 PPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVI 294



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 112/241 (46%), Gaps = 2/241 (0%)

Query: 487 DRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
           D  +Y   IA        + A RL  EM  +G  PD++TYN  +    K G  +EA +LL
Sbjct: 109 DTTSYNIAIAACSNGRQWATAVRLLREMPTEGVTPDVVTYNSAIAACSKGGRWKEAMDLL 168

Query: 547 RKMVG--DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
            +MV   +G  PD +TY S I A    G  +   DL   M+ +G+ P L+TY   I A A
Sbjct: 169 TQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACA 228

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
              R E A     E+  +G  P+  TYN +I+   +  R  +A  L   M    I  +  
Sbjct: 229 KGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVI 288

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           +Y+ +I        W+EA+ L ++M  + + P+  ++++ +      D    A++ L  +
Sbjct: 289 SYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREM 348

Query: 725 T 725
           T
Sbjct: 349 T 349


>gi|357500143|ref|XP_003620360.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495375|gb|AES76578.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 426

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 142/433 (32%), Positives = 225/433 (51%), Gaps = 23/433 (5%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           GI+  I+  + +++SF    ++  A  +L ++   G  P+ VT   L+ G   N E+++A
Sbjct: 5   GIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNEVKKA 64

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
                D++  G ++   SY  +I G  + G                 AP    Y+++I  
Sbjct: 65  LHFHDDVIAKGFRLDNVSYGTLINGLCKSG--------------ETKAPDQFMYSMIINR 110

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           LCK   V DA   + EM+ K + PD+++YNTL+YG+C  G + +A  LF+E+R +N+VP 
Sbjct: 111 LCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNIVPN 170

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           V ++N LIDGLC+ GD++  + +   MI Q + PDV+T + +++G   +   + AR  FN
Sbjct: 171 VCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFN 230

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            M + G+  D  +Y   I G  K     EA  L +EM  K   PD ITY+ L+ GL KLG
Sbjct: 231 AMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLG 290

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            +    +L+ +M   G   + ITY+S+++   + G       +F  +  KG  P +VTY 
Sbjct: 291 RISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYN 350

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           +L+      GRL+ A   F ++ +KG R +V  Y  +INGLCR    D+AYG        
Sbjct: 351 ILVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTVMINGLCREALFDEAYGC------- 403

Query: 658 GILPNKYTYTILI 670
              PN  TY I+I
Sbjct: 404 --TPNAVTYEIII 414



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 127/417 (30%), Positives = 208/417 (49%), Gaps = 28/417 (6%)

Query: 222 GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY 281
            FSV A+ +     + G +P  VT  T+L   C   E+++AL    ++  +G   + V+Y
Sbjct: 29  AFSVLAKIL-----KIGYQPDTVTLTTLLKGLCINNEVKKALHFHDDVIAKGFRLDNVSY 83

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
             LI G  ++GE +     +              Y+ II    +  L+V+A +L  EMV 
Sbjct: 84  GTLINGLCKSGETKAPDQFM--------------YSMIINRLCKDKLVVDAYDLYCEMVV 129

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
           + + P + TYN LIYG C  G++ DA   F EM  KN++P++ S+N L+ G C+ G++  
Sbjct: 130 KRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNIVPNVCSFNILIDGLCKEGDVKG 189

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
              +   +  +++ P VVT ++LIDG         A+ +   M   G+  D+ +Y IM+N
Sbjct: 190 GKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTIDLRSYNIMIN 249

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
           G  K   +  A   F EM  K + PD   Y+T I G  KLG  S  + L +EM A G   
Sbjct: 250 GLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMRATGRSA 309

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           ++ITY+ L++ LCK G  + A  +  K+   GF P+ +TY  ++    + G L+  +++F
Sbjct: 310 NVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDAQEIF 369

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           +++L KG    +  YTV+I+        + A+         G  PN +TY  +I  L
Sbjct: 370 HDLLIKGYRLDVRLYTVMINGLCREALFDEAY---------GCTPNAVTYEIIIRAL 417



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 211/414 (50%), Gaps = 14/414 (3%)

Query: 269 MQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
           M+ RG   + +  ++LI  F    +L  A  ++  +LK+G +    +   ++ G      
Sbjct: 1   MELRGIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNE 60

Query: 329 LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNT 388
           + +AL+  ++++ +G      +Y  LI GLCK G                  PD   Y+ 
Sbjct: 61  VKKALHFHDDVIAKGFRLDNVSYGTLINGLCKSGETK--------------APDQFMYSM 106

Query: 389 LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
           ++   C+   + +A+ L+ E+  + + P VVTYNTLI G C  G LE A +L   M  + 
Sbjct: 107 IINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKN 166

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
           I+P+V ++ I+++G CK G++   +     M+++ ++PD    ++ I G   +   ++A 
Sbjct: 167 IVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKAR 226

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
            +   M   G   DL +YN++++GL K   ++EA  L ++M      PD ITY+++I   
Sbjct: 227 YIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGL 286

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
            ++G +    DL + M   G S  ++TY+ L++     G  + A   F++++ KG  PN+
Sbjct: 287 GKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNM 346

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
           +TYN L++GLC+  R+  A  +F D+  +G   +   YT++IN  C    + EA
Sbjct: 347 VTYNILVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTVMINGLCREALFDEA 400



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 189/367 (51%), Gaps = 14/367 (3%)

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
           M  RG+   +   +ILI       +++ A     ++L+    PD ++  TLL G C +  
Sbjct: 1   MELRGIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNE 60

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           + +A    D++ ++      V+Y TLI+GLC+ G+ +               PD   Y++
Sbjct: 61  VKKALHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKA--------------PDQFMYSM 106

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           ++N  CK   +  A + + EM+ K + PD   Y T I G   +G   +A RL  EM  K 
Sbjct: 107 IINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKN 166

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
             P++ ++N+L+ GLCK G ++    +L  M+     PD +T +S+I     +    + R
Sbjct: 167 IVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKAR 226

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
            +FN M + G++  L +Y ++I+  +    ++ A + F EMQ K + P+ ITY+ LI+GL
Sbjct: 227 YIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGL 286

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
            +L RI   + L  +M   G   N  TY+ L+N  C +G++  A+R++ ++ D+  EP+ 
Sbjct: 287 GKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNM 346

Query: 699 CTHSALL 705
            T++ L+
Sbjct: 347 VTYNILV 353



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 177/330 (53%), Gaps = 9/330 (2%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           PD    + II  L  +   V A ++Y  M    I P +VTYNT++  FC  G++++A+ L
Sbjct: 99  PDQFMYSMIINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRL 158

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
             EM+ +   PN  ++N+LI G  + G+++  + ++  M+K  +K    + + +I GY  
Sbjct: 159 FNEMRLKNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFL 218

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
                +A  +   M   GV   L +YNI+I GL K   V +A   F EM  K++ PD I+
Sbjct: 219 VKKANKARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTIT 278

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           Y+TL+ G  + G I   + L DE+R+      V+TY++L++ LC+ G  + A ++   + 
Sbjct: 279 YSTLIDGLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIK 338

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
           ++G  P+++TY I+V+G CK G L  A+E F+++L KG + D   YT  I G  +     
Sbjct: 339 DKGFEPNMVTYNILVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTVMINGLCREALFD 398

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
           EAY         G  P+ +TY +++  L K
Sbjct: 399 EAY---------GCTPNAVTYEIIIRALFK 419



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 189/394 (47%), Gaps = 30/394 (7%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V  K+L+ G  PD      ++K L  N    KA   +  +   G +   V+Y T+++  C
Sbjct: 32  VLAKILKIGYQPDTVTLTTLLKGLCINNEVKKALHFHDDVIAKGFRLDNVSYGTLINGLC 91

Query: 255 KEGEMQ---------------------EALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           K GE +                     +A +L  EM  +   P+ VTYN LI GF   G+
Sbjct: 92  KSGETKAPDQFMYSMIINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQ 151

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           LE A  L  +M    +  +  S+N +I G  ++G +    ++   M+ + V P + T + 
Sbjct: 152 LEDAIRLFNEMRLKNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSS 211

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           LI G     + + AR+ F  M +  V  D+ SYN ++ G  ++  + EA +LF E++ ++
Sbjct: 212 LIDGYFLVKKANKARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKS 271

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           + P  +TY+TLIDGL + G +     L + M   G   +VITY+ ++N  CK G+   A 
Sbjct: 272 MTPDTITYSTLIDGLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAI 331

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
             F ++  KG +P+   Y   + G  K G   +A  +  ++L KG+  D+  Y V+++GL
Sbjct: 332 RIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTVMINGL 391

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
           C+    +EA          G  P+ +TY  II A
Sbjct: 392 CREALFDEAY---------GCTPNAVTYEIIIRA 416



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 187/395 (47%), Gaps = 23/395 (5%)

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
           + RG+ RD++ L + +++  +   +C       L  A ++  +++  G  P   T   L+
Sbjct: 2   ELRGIQRDIINLSILINSFYH---LCQ------LNYAFSVLAKILKIGYQPDTVTLTTLL 52

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
            GLC    V  A H   +++ K    D +SY TL+ G C+SG          E ++    
Sbjct: 53  KGLCINNEVKKALHFHDDVIAKGFRLDNVSYGTLINGLCKSG----------ETKA---- 98

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P    Y+ +I+ LC+   +  A  L   M+ + I PDV+TY  ++ G C +G L  A   
Sbjct: 99  PDQFMYSMIINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRL 158

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
           FNEM  K + P+  ++   I G  K GD      +   M+ +   PD++T + L+ G   
Sbjct: 159 FNEMRLKNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFL 218

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
           +    +A  +   M  +G   D  +Y  +I+   +   +     LF  M  K ++P  +T
Sbjct: 219 VKKANKARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTIT 278

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           Y+ LI      GR+   +    EM+  G   NVITY++L+N LC+    D A  +F  ++
Sbjct: 279 YSTLIDGLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIK 338

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           ++G  PN  TY IL++  C  G  ++A  ++ ++L
Sbjct: 339 DKGFEPNMVTYNILVDGLCKNGRLKDAQEIFHDLL 373



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 143/316 (45%), Gaps = 54/316 (17%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSV--KAREVYRMMGEFGIK-- 240
           K  +V     ++ +M+   + PDV   N +I      GF +  +  +  R+  E  +K  
Sbjct: 113 KDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIY-----GFCIVGQLEDAIRLFNEMRLKNI 167

Query: 241 -PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
            P++ ++N ++D  CKEG+++    +L  M  +   P+ VT + LI G+    +  +AR 
Sbjct: 168 VPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARY 227

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
           +   M + G+ +   SYN +I G S+  ++ EA+ L +EM  + + P   TY+ LI GL 
Sbjct: 228 IFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLG 287

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
           K GR+S       EM       ++I+Y++LL   C+SG+   A  +F +++ +   P +V
Sbjct: 288 KLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMV 347

Query: 420 TYNTL-----------------------------------IDGLCRYGDLEVAQQLKENM 444
           TYN L                                   I+GLCR    + A       
Sbjct: 348 TYNILVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTVMINGLCREALFDEA------- 400

Query: 445 INQGILPDVITYTIMV 460
              G  P+ +TY I++
Sbjct: 401 --YGCTPNAVTYEIII 414



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 86/177 (48%), Gaps = 9/177 (5%)

Query: 184 TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
           +K  MV++ +++F +M    + PD    + +I  L   G      ++   M   G   ++
Sbjct: 252 SKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMRATGRSANV 311

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           +TY+++L+  CK G    A+ +  +++ +G  PN VTYN+L+ G  +NG L+ A+ +  D
Sbjct: 312 ITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDAQEIFHD 371

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +L  G ++    Y  +I G   + L  EA          G  P   TY I+I  L K
Sbjct: 372 LLIKGYRLDVRLYTVMINGLCREALFDEAY---------GCTPNAVTYEIIIRALFK 419



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 28/125 (22%), Positives = 57/125 (45%), Gaps = 26/125 (20%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           + ++M   G   +V   + ++ VL  +G    A  ++  + + G +P++VTYN ++D  C
Sbjct: 298 LIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLC 357

Query: 255 KEGEMQEALELLWEM--------------------------QGRGCSPNGVTYNVLITGF 288
           K G +++A E+  ++                          +  GC+PN VTY ++I   
Sbjct: 358 KNGRLKDAQEIFHDLLIKGYRLDVRLYTVMINGLCREALFDEAYGCTPNAVTYEIIIRAL 417

Query: 289 SRNGE 293
            +N +
Sbjct: 418 FKNDK 422


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 132/440 (30%), Positives = 237/440 (53%), Gaps = 8/440 (1%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE----FGIKPSIVTYNTML 250
           +F+ M+++   P + + NR++  +      +K  +V   +G+     GI+  + T+N ++
Sbjct: 72  LFSDMVKSRPFPSIVDFNRLLSAI----VKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
           + FC   ++  AL +L +M   G  P+ VT   L+ GF R   +  A  L+  M+++G K
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 187

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
               +YN II    +   + +A +  +E+  +G+ P + TY  L+ GLC   R SDA   
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 247

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
             +M++K + P++I+Y+ LL  + ++G + EA  LF+E+   ++ P +VTY++L++GLC 
Sbjct: 248 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCL 307

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
           +  ++ A Q+ + M+++G L DV++Y  ++NG CK   +    + F EM ++GL  +   
Sbjct: 308 HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVT 367

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           Y T I G  + GD  +A     +M   G  PD+ TYN+L+ GLC  G LE+A  +   M 
Sbjct: 368 YNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ 427

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
                 D +TYT++I    + G +     LF ++  KGL P +VTYT ++     +G L 
Sbjct: 428 KREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLH 487

Query: 611 LAFMYFSEMQVKGIRPNVIT 630
                +++M+ +G+  N  T
Sbjct: 488 EVEALYTKMKQEGLMKNDCT 507



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 134/469 (28%), Positives = 243/469 (51%), Gaps = 15/469 (3%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PSIV +N +L +  K  +    + L  +M+  G   +  T+N++I  F    ++  A  +
Sbjct: 83  PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  MLKLG +    +   ++ G+  +  + +A++L ++MV  G  P +  YN +I  LCK
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
             RV+DA   F E+ RK + P++++Y  L+ G C S    +A  L  ++  + + P V+T
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y+ L+D   + G +  A++L E M+   I PD++TY+ +VNG C    +  A + F+ M+
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMV 322

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            KG   D  +Y T I G  K     +  +L  EM  +G   + +TYN L+ G  + G ++
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           +A E   +M   G  PD  TY  ++    + G+L +   +F +M ++ +   +VTYT +I
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                 G++E A+  F  + +KG++P+++TY  +++GLC    + +   L+  M++EG++
Sbjct: 443 RGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLM 502

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQL 709
            N  T +         G+   +  L K+ML        C ++  LLK +
Sbjct: 503 KNDCTLS--------DGDITLSAELIKKMLS-------CGYAPSLLKDI 536



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 198/376 (52%), Gaps = 12/376 (3%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + +++ V   + + +KM+  G  PD+   N II  L        A + ++ +   GI+P+
Sbjct: 165 FCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPN 224

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +VTY  +++  C      +A  LL +M  +  +PN +TY+ L+  F +NG++ +A+ L  
Sbjct: 225 VVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFE 284

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M+++ +     +Y+ ++ G      + EA  + + MV++G    + +YN LI G CK  
Sbjct: 285 EMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAK 344

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           RV D    F EM ++ ++ + ++YNTL+ G+ ++G++ +A   F ++    + P + TYN
Sbjct: 345 RVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN 404

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            L+ GLC  G+LE A  + E+M  + +  D++TYT ++ G CK G +  A   F  +  K
Sbjct: 405 ILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 464

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL--GSLE 540
           GL+PD   YTT ++G    G   E   L  +M  +G          L+   C L  G + 
Sbjct: 465 GLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG----------LMKNDCTLSDGDIT 514

Query: 541 EANELLRKMVGDGFIP 556
            + EL++KM+  G+ P
Sbjct: 515 LSAELIKKMLSCGYAP 530



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 184/378 (48%), Gaps = 35/378 (9%)

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR---------SGNIGEAFLLFDELRSRN 413
           +++DA   F +M++    P I+ +N LL    +          G   E   + ++L + N
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 414 LV--------------------------PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
           +V                          P  VT  +L++G CR   +  A  L + M+  
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
           G  PD++ Y  +++  CK   ++ A +FF E+ RKG++P+   YT  + G       S+A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
            RL  +M+ K   P++ITY+ L+    K G + EA EL  +MV     PD +TY+S+++ 
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNG 304

Query: 568 SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
                 +     +F+ M+ KG    +V+Y  LI+      R+E     F EM  +G+  N
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYK 687
            +TYN LI G  +   +D+A   F  M+  GI P+ +TY IL+   C+ G  ++AL +++
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424

Query: 688 EMLDREIEPDYCTHSALL 705
           +M  RE++ D  T++ ++
Sbjct: 425 DMQKREMDLDIVTYTTVI 442



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 166/311 (53%)

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
           R   + +A  LF ++      P++V +N L+  + +    +V   L + M   GI  D+ 
Sbjct: 62  RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
           T+ I++N  C    +S+A     +ML+ G +PDR    + + G  +    S+A  L ++M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
           +  G+ PD++ YN ++  LCK   + +A +  +++   G  P+ +TYT++++        
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
                L ++M++K ++P ++TY+ L+ A    G++  A   F EM    I P+++TY++L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           +NGLC   RID+A  +F  M  +G L +  +Y  LIN  C A   ++ ++L++EM  R +
Sbjct: 302 VNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361

Query: 695 EPDYCTHSALL 705
             +  T++ L+
Sbjct: 362 VSNTVTYNTLI 372



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/404 (24%), Positives = 196/404 (48%), Gaps = 35/404 (8%)

Query: 72  AFCNNRWVSDHFQAVVS------DPELLV--RVLNRIREKPRI--ALRFFRWVETQPGVK 121
            FC    VSD    V         P+++    +++ + +  R+  A  FF+ +E + G++
Sbjct: 164 GFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIE-RKGIR 222

Query: 122 RDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLL 181
            +   +  ++     +GL  S+ W        +   +L  +I   ++   ++     LL 
Sbjct: 223 PNVVTYTALV-----NGLCNSSRWS-------DAARLLSDMIKKKITP--NVITYSALLD 268

Query: 182 IYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKP 241
            + K   V +   +F +M+R  + PD+   + ++  L  +    +A +++ +M   G   
Sbjct: 269 AFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLA 328

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
            +V+YNT+++ FCK   +++ ++L  EM  RG   N VTYN LI GF + G++++A+   
Sbjct: 329 DVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFF 388

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
             M   G+     +YN ++ G  + G L +AL + E+M  R +   + TY  +I G+CK 
Sbjct: 389 SQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKT 448

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           G+V +A   F  +  K + PDI++Y T++ G C  G + E   L+ +++   L+    T 
Sbjct: 449 GKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL 508

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
           +         GD+ ++ +L + M++ G  P ++    + +G CK
Sbjct: 509 SD--------GDITLSAELIKKMLSCGYAPSLLKD--IKSGVCK 542


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 133/461 (28%), Positives = 224/461 (48%)

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY T+++++C  G++  +   L  +   G +P+   Y   + G+ R G L  A  L   M
Sbjct: 74  TYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLM 133

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
              G   +A +Y  ++ G    G++ EA+++   M   G AP    Y  +++GLC  GR 
Sbjct: 134 PLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRT 193

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            +A     + + +   P+++ YN L+ GYC  G++  A  +F+ +      P V TY  L
Sbjct: 194 REAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTEL 253

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           I G C+   L+ A  L   M++ G++P+V+TYT ++ G C  G L  A      M   GL
Sbjct: 254 ISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGL 313

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            P+ +  +  I    K     EA  L   ++ KG   + I Y  L+ GLCK G    A+ 
Sbjct: 314 VPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADR 373

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           L++ +V  GF+PD  TY+S+I       +L     + ++M+ KG+ P+ VTYT++I    
Sbjct: 374 LMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELV 433

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
                + +     +M   GI+P+V TY   +   C   R++ A  + + M + G+ PN  
Sbjct: 434 REVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLV 493

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           TY  LI    N G   +A   +K M+    +P+  +++ LL
Sbjct: 494 TYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLL 534



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 135/433 (31%), Positives = 212/433 (48%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G  P    Y + +  +C+ G +  A  L   M  RGC     TY  L+ G    G + +A
Sbjct: 102 GFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREA 161

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             +   M   G     H Y  ++ G    G   EA  L  + +  G  P +  YN LI G
Sbjct: 162 MSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDG 221

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
            C  G +  A   F  M      P++ +Y  L+ G+C+S  +  A +LF  +    LVP 
Sbjct: 222 YCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPN 281

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           VVTY  LI G C  G L+ A +L ++M N G++P+  T +++++  CK   +  A+    
Sbjct: 282 VVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLG 341

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            +++KG++ +   YT+ I G  K G  + A RL + ++++GF PD  TY+ L+ GLC+  
Sbjct: 342 SLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQK 401

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            L EA  +L  M+  G  P  +TYT II   +        + + + M+  G+ P + TYT
Sbjct: 402 ELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYT 461

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           + + ++   GR+E A      M   G+ PN++TYNALI G   L    QA+  F  M   
Sbjct: 462 IFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVAN 521

Query: 658 GILPNKYTYTILI 670
           G  PN+ +YT+L+
Sbjct: 522 GCKPNEESYTVLL 534



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 145/546 (26%), Positives = 240/546 (43%), Gaps = 51/546 (9%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
            + +LR G  PD       +      G    A  ++ +M   G   +  TY  +L   C 
Sbjct: 95  LSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCG 154

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
            G ++EA+ +   MQ  GC+P+   Y  ++ G    G   +A  L+ D +  G + +   
Sbjct: 155 AGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVV 214

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           YN +I GY   G L  A+++ E M   G +P + TY  LI G CK  ++  A   F  M+
Sbjct: 215 YNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMV 274

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
              ++P++++Y  L+ G C  G +  A+ L   + +  LVP   T + LID LC++  + 
Sbjct: 275 DAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVG 334

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            AQ L  ++I +GI  + I YT +++G CK G  + A      ++ +G  PD   Y++ I
Sbjct: 335 EAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLI 394

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
            G  +  + SEA  + ++M+ KG  P  +TY +++  L +    + + ++L KM+  G  
Sbjct: 395 DGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIK 454

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           PD  TYT  + +    G +     +  +M+  G+ P LVTY  LI  +A  G    AF  
Sbjct: 455 PDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFST 514

Query: 616 FSEMQVKGIRPN------------------------------------------------ 627
           F  M   G +PN                                                
Sbjct: 515 FKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQL 574

Query: 628 ---VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
              +  YN  +  LCR+ R+D+A  L I+M+   + P++  YT +I   C      EAL 
Sbjct: 575 PSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALT 634

Query: 685 LYKEML 690
               M+
Sbjct: 635 FVDSMV 640



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 144/522 (27%), Positives = 257/522 (49%), Gaps = 16/522 (3%)

Query: 188 MVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
           MV + + VF  M  +G  PD      ++  L   G + +A  +       G +P++V YN
Sbjct: 157 MVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYN 216

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
            ++D +C  G+++ A+++   M   GCSPN  TY  LI+GF ++ +L++A  L   M+  
Sbjct: 217 ALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDA 276

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           GL  +  +Y  +I G    G L  A  L + M   G+ P   T ++LI  LCK  RV +A
Sbjct: 277 GLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEA 336

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
           +     +++K +  + I Y +L+ G C++G    A  L   L S+  VP   TY++LIDG
Sbjct: 337 QLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDG 396

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           LCR  +L  A  + ++M+ +G+ P  +TYTI+++   +      +++  ++M+  G++PD
Sbjct: 397 LCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPD 456

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
            F YT  +      G   +A  +   M+  G  P+L+TYN L+ G   LG   +A    +
Sbjct: 457 VFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFK 516

Query: 548 KMVGDGFIPDHITYTSIIHASLE----------------MGDLRRGRDLFNNMLRKGLSP 591
            MV +G  P+  +YT ++   ++                + +++    L   M++  L  
Sbjct: 517 HMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPS 576

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
            +  Y   + +     RL+ A +   EMQ   + P+   Y ++I   CRL+ + +A    
Sbjct: 577 EIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFV 636

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
             M + G +P   +Y  +I+  C  G+ Q A +++ +ML +E
Sbjct: 637 DSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKE 678



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 175/369 (47%)

Query: 337 EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS 396
           E   +R  A  L TY  LI   C  G +  ++     +LR    PD  +Y + + GYCR+
Sbjct: 61  ESFASRMPARNLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRA 120

Query: 397 GNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
           G +  A  LF  +  R  V T  TY  L+ GLC  G +  A  +   M   G  PD   Y
Sbjct: 121 GLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVY 180

Query: 457 TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA 516
             MV+G C  G    A    ++ + +G +P+   Y   I G   +GD   A  + E M  
Sbjct: 181 ATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDV 240

Query: 517 KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
            G  P++ TY  L+ G CK   L+ A  L  +MV  G +P+ +TYT++I      G L  
Sbjct: 241 NGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDC 300

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
              L  +M   GL P   T +VLI A     R+  A +    +  KGI+ N I Y +LI+
Sbjct: 301 AYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLID 360

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
           GLC+  R   A  L   +  +G +P+ +TY+ LI+  C      EA+ +  +M+++ ++P
Sbjct: 361 GLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQP 420

Query: 697 DYCTHSALL 705
              T++ ++
Sbjct: 421 SPVTYTIII 429



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 169/368 (45%), Gaps = 24/368 (6%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +   ++  G +PD    + +I  L       +A  V   M E G++PS VTY  ++D   
Sbjct: 374 LMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELV 433

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           +E     + ++L +M   G  P+  TY + +  +   G +E A  ++  M+  G+  +  
Sbjct: 434 REVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLV 493

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK-------------- 360
           +YN +ICGY+  GL  +A +  + MV  G  P   +Y +L+  L K              
Sbjct: 494 TYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSI 553

Query: 361 WGRVSDAR--HRFFEMLRKNVIPDIIS-YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           W ++++ +  H   E + K  +P  I  YN  L   CR   + EA +L  E++S NL P+
Sbjct: 554 W-KIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPS 612

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
              Y ++I   CR   L  A    ++M+  G +P + +Y  +++  C+ G++  A++ F 
Sbjct: 613 EDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFG 672

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           +ML K    +  A+   I G L+ G  +E   L   M  K + P    Y  L       G
Sbjct: 673 DMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPSDALYARLT------G 726

Query: 538 SLEEANEL 545
            + +AN++
Sbjct: 727 KITDANDI 734


>gi|242039357|ref|XP_002467073.1| hypothetical protein SORBIDRAFT_01g019180 [Sorghum bicolor]
 gi|241920927|gb|EER94071.1| hypothetical protein SORBIDRAFT_01g019180 [Sorghum bicolor]
          Length = 808

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 160/553 (28%), Positives = 271/553 (49%), Gaps = 7/553 (1%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           + D L   Y +  M    L V +KM    +   +   + ++  LR       A E+++ M
Sbjct: 150 VWDALANSYARAQMNHDALYVLSKMSSLNMQISITTYDSLLYSLRKADV---ALEIFKEM 206

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG-CSPNGVTYNVLITGFSRNGE 293
              GI PS  +++ ++D  CK+ ++ EAL  L E++  G   P G+T+N L++     G 
Sbjct: 207 ESCGIPPSDYSHSILIDGLCKQDKIGEALSFLQEIRKEGKFIPLGMTFNTLMSALCNWGF 266

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           ++ A+ +   MLK GL  S H+Y+ II G  + G + EA N+ + +   G+   + T N 
Sbjct: 267 IQDAKSVFCLMLKYGLNPSRHTYSTIIHGLCKIGSVSEAFNIFQSVTEEGMELDIVTCNS 326

Query: 354 LIYGLCKWGRVSDARHRFFEMLRK-NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
           LI G    G   +   +  EM+R   V PDI++Y  L+ G+C  G++ E   +  ++  +
Sbjct: 327 LINGFRLHGHTREIP-KMIEMMRGLGVEPDIVTYTILIAGHCEGGDVEEGMKIRKDILGQ 385

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
            +   +VTY+ LI+ L + G     + L   + + G+  DVI Y+I+++G  K+G +  A
Sbjct: 386 GMELNIVTYSVLINALFKKGLFYEVENLLGEICSVGLELDVIAYSILIHGYSKLGEIGRA 445

Query: 473 REFFNEMLR-KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
            + +N M   + + P    + + + G  K G   EA    E + +K  P D++ YNV++ 
Sbjct: 446 LQVWNLMCSSQRVTPTSVNHVSILLGLCKKGFLDEARSYLETIASKYQPSDVVLYNVVID 505

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           G  K+G +  A +L   ++  G  P  +T  S+++   + GDL      F  +    L P
Sbjct: 506 GYAKVGDIGNAVQLYDAIIMAGMCPTIVTCNSLLYGYCKFGDLHMAESYFTAIQLSDLLP 565

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
           T VTYT L+ A +  G++      F EM  KGI+PN +TY+ +I GLC+      A  + 
Sbjct: 566 TTVTYTTLMDALSEAGKVHSMLSLFKEMTGKGIKPNAVTYSVVIKGLCKQFMFHDAKNVL 625

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDK 711
            DM  EG   +   Y  LI   C   + + A  +Y+ M+ R + P   T++ L+     K
Sbjct: 626 DDMCIEGFDADPIPYNTLIQGFCETQDAKNAFGVYELMVFRGVMPTPVTYNLLVNVLCSK 685

Query: 712 DYKVHAVEYLESL 724
              +HA   LES 
Sbjct: 686 GLVIHAEMQLESF 698



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 135/486 (27%), Positives = 243/486 (50%), Gaps = 1/486 (0%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   V +   +F  +   G+  D+  CN +I   R +G + +  ++  MM   G++P IV
Sbjct: 298 KIGSVSEAFNIFQSVTEEGMELDIVTCNSLINGFRLHGHTREIPKMIEMMRGLGVEPDIV 357

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY  ++   C+ G+++E +++  ++ G+G   N VTY+VLI    + G   +   L+ ++
Sbjct: 358 TYTILIAGHCEGGDVEEGMKIRKDILGQGMELNIVTYSVLINALFKKGLFYEVENLLGEI 417

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT-RGVAPTLATYNILIYGLCKWGR 363
             +GL++   +Y+ +I GYS+ G +  AL +   M + + V PT   +  ++ GLCK G 
Sbjct: 418 CSVGLELDVIAYSILIHGYSKLGEIGRALQVWNLMCSSQRVTPTSVNHVSILLGLCKKGF 477

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           + +AR     +  K    D++ YN ++ GY + G+IG A  L+D +    + PT+VT N+
Sbjct: 478 LDEARSYLETIASKYQPSDVVLYNVVIDGYAKVGDIGNAVQLYDAIIMAGMCPTIVTCNS 537

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           L+ G C++GDL +A+     +    +LP  +TYT +++   + G +      F EM  KG
Sbjct: 538 LLYGYCKFGDLHMAESYFTAIQLSDLLPTTVTYTTLMDALSEAGKVHSMLSLFKEMTGKG 597

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           ++P+   Y+  I G  K     +A  + ++M  +GF  D I YN L+ G C+    + A 
Sbjct: 598 IKPNAVTYSVVIKGLCKQFMFHDAKNVLDDMCIEGFDADPIPYNTLIQGFCETQDAKNAF 657

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
            +   MV  G +P  +TY  +++     G +        +  ++G       Y  LI A 
Sbjct: 658 GVYELMVFRGVMPTPVTYNLLVNVLCSKGLVIHAEMQLESFRKQGAKLRKFAYITLIKAQ 717

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
            A+G    A M+F ++   G   ++  ++A IN LC+ +   +A  L   M   G+ P+ 
Sbjct: 718 CAKGMPYKAIMWFGKLLDAGFEASIEDFSAAINRLCKRQFTKEALMLVPIMLSVGVYPDV 777

Query: 664 YTYTIL 669
             Y +L
Sbjct: 778 ELYRVL 783



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 148/504 (29%), Positives = 250/504 (49%), Gaps = 1/504 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           VF  ML+ GL P     + II  L   G   +A  +++ + E G++  IVT N++++ F 
Sbjct: 273 VFCLMLKYGLNPSRHTYSTIIHGLCKIGSVSEAFNIFQSVTEEGMELDIVTCNSLINGFR 332

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
             G  +E  +++  M+G G  P+ VTY +LI G    G++E+   + +D+L  G++++  
Sbjct: 333 LHGHTREIPKMIEMMRGLGVEPDIVTYTILIAGHCEGGDVEEGMKIRKDILGQGMELNIV 392

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +Y+ +I    +KGL  E  NL  E+ + G+   +  Y+ILI+G  K G +  A   +  M
Sbjct: 393 TYSVLINALFKKGLFYEVENLLGEICSVGLELDVIAYSILIHGYSKLGEIGRALQVWNLM 452

Query: 375 LR-KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
              + V P  +++ ++L G C+ G + EA    + + S+     VV YN +IDG  + GD
Sbjct: 453 CSSQRVTPTSVNHVSILLGLCKKGFLDEARSYLETIASKYQPSDVVLYNVVIDGYAKVGD 512

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           +  A QL + +I  G+ P ++T   ++ G CK G+L MA  +F  +    L P    YTT
Sbjct: 513 IGNAVQLYDAIIMAGMCPTIVTCNSLLYGYCKFGDLHMAESYFTAIQLSDLLPTTVTYTT 572

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            +    + G       L +EM  KG  P+ +TY+V++ GLCK     +A  +L  M  +G
Sbjct: 573 LMDALSEAGKVHSMLSLFKEMTGKGIKPNAVTYSVVIKGLCKQFMFHDAKNVLDDMCIEG 632

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
           F  D I Y ++I    E  D +    ++  M+ +G+ PT VTY +L++   ++G +  A 
Sbjct: 633 FDADPIPYNTLIQGFCETQDAKNAFGVYELMVFRGVMPTPVTYNLLVNVLCSKGLVIHAE 692

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
           M     + +G +     Y  LI   C      +A   F  + + G   +   ++  IN  
Sbjct: 693 MQLESFRKQGAKLRKFAYITLIKAQCAKGMPYKAIMWFGKLLDAGFEASIEDFSAAINRL 752

Query: 674 CNAGNWQEALRLYKEMLDREIEPD 697
           C     +EAL L   ML   + PD
Sbjct: 753 CKRQFTKEALMLVPIMLSVGVYPD 776



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 129/479 (26%), Positives = 241/479 (50%), Gaps = 14/479 (2%)

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           + ++ + +S+ +     +AL +L +M       +  TY+ L+    +    + A  + ++
Sbjct: 149 IVWDALANSYARAQMNHDALYVLSKMSSLNMQISITTYDSLLYSLRKA---DVALEIFKE 205

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG-VAPTLATYNILIYGLCKWG 362
           M   G+  S +S++ +I G  ++  + EAL+  +E+   G   P   T+N L+  LC WG
Sbjct: 206 MESCGIPPSDYSHSILIDGLCKQDKIGEALSFLQEIRKEGKFIPLGMTFNTLMSALCNWG 265

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            + DA+  F  ML+  + P   +Y+T+++G C+ G++ EAF +F  +    +   +VT N
Sbjct: 266 FIQDAKSVFCLMLKYGLNPSRHTYSTIIHGLCKIGSVSEAFNIFQSVTEEGMELDIVTCN 325

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           +LI+G   +G      ++ E M   G+ PD++TYTI++ G C+ G++    +   ++L +
Sbjct: 326 SLINGFRLHGHTREIPKMIEMMRGLGVEPDIVTYTILIAGHCEGGDVEEGMKIRKDILGQ 385

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G++ +   Y+  I    K G   E   L  E+ + G   D+I Y++L+HG  KLG +  A
Sbjct: 386 GMELNIVTYSVLINALFKKGLFYEVENLLGEICSVGLELDVIAYSILIHGYSKLGEIGRA 445

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG-----RDLFNNMLRKGLSPTLVTYT 597
            ++   M         +T TS+ H S+ +G  ++G     R     +  K     +V Y 
Sbjct: 446 LQVWNLMCSS----QRVTPTSVNHVSILLGLCKKGFLDEARSYLETIASKYQPSDVVLYN 501

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           V+I  +A  G +  A   +  + + G+ P ++T N+L+ G C+   +  A   F  ++  
Sbjct: 502 VVIDGYAKVGDIGNAVQLYDAIIMAGMCPTIVTCNSLLYGYCKFGDLHMAESYFTAIQLS 561

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVH 716
            +LP   TYT L++    AG     L L+KEM  + I+P+  T+S +++K L K +  H
Sbjct: 562 DLLPTTVTYTTLMDALSEAGKVHSMLSLFKEMTGKGIKPNAVTYS-VVIKGLCKQFMFH 619



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 120/296 (40%), Gaps = 2/296 (0%)

Query: 154 NMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNR 213
           N   + D +I  G+  C +I   + LL  Y K   +      F  +  + LLP       
Sbjct: 515 NAVQLYDAIIMAGM--CPTIVTCNSLLYGYCKFGDLHMAESYFTAIQLSDLLPTTVTYTT 572

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
           ++  L + G       +++ M   GIKP+ VTY+ ++   CK+    +A  +L +M   G
Sbjct: 573 LMDALSEAGKVHSMLSLFKEMTGKGIKPNAVTYSVVIKGLCKQFMFHDAKNVLDDMCIEG 632

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
              + + YN LI GF    + + A G+   M+  G+  +  +YN ++     KGL++ A 
Sbjct: 633 FDADPIPYNTLIQGFCETQDAKNAFGVYELMVFRGVMPTPVTYNLLVNVLCSKGLVIHAE 692

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
              E    +G       Y  LI   C  G    A   F ++L       I  ++  +   
Sbjct: 693 MQLESFRKQGAKLRKFAYITLIKAQCAKGMPYKAIMWFGKLLDAGFEASIEDFSAAINRL 752

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
           C+     EA +L   + S  + P V  Y  L   + +  +L     L+   I  GI
Sbjct: 753 CKRQFTKEALMLVPIMLSVGVYPDVELYRVLGTAVQKKNELFYLPILQALAIKTGI 808


>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 566

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 132/459 (28%), Positives = 231/459 (50%), Gaps = 3/459 (0%)

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M   G  P +V    ++  FCK G  + A  ++  ++  G   +  +YNVLI  + ++GE
Sbjct: 95  MTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYCKSGE 154

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           +E+A   +R +    +  +A +Y+ ++C   ++G L +A+ + +  +     P + T  +
Sbjct: 155 IEEA---LRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTV 211

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           LI   CK   V  A   F EM  K   PD+++YN L+ G+C+ G + EA +   +L S  
Sbjct: 212 LIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYG 271

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
               V+++N ++  LC  G    A +L   M+ +G  P V+T+ I++N  C+ G L  A 
Sbjct: 272 CQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKAL 331

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
                M + G  P+  ++   I G         A    E M+++G  PD++TYN+L+  L
Sbjct: 332 NVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTAL 391

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
           CK G +++A  +L ++   G  P  I+Y ++I   L++G      +L   M  KGL P L
Sbjct: 392 CKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDL 451

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
           +T T ++   +  G++  A  +F  ++  GI+PN   YN+++ GLC+ ++   A    +D
Sbjct: 452 ITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVD 511

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
           M   G  P + +YT LI      G  +EA +L  E+  R
Sbjct: 512 MVANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSR 550



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 199/379 (52%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           D +L     +  ++Q + V ++ L++   PDV  C  +I          +A +++  M  
Sbjct: 175 DAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRG 234

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G KP +VTYN ++  FCKEG + EA+  L ++   GC  + +++N+++      G    
Sbjct: 235 KGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMD 294

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  L+  ML+ G   S  ++N +I    +KGLL +ALN+ E M   G  P   ++N LI 
Sbjct: 295 AMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQ 354

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           G C    +  A      M+ +   PDI++YN LL   C+ G + +A ++  +L S+   P
Sbjct: 355 GFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSP 414

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
           ++++YNT+IDGL + G  E+A +L E M  +G+ PD+IT T +V G  + G +  A +FF
Sbjct: 415 SLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFF 474

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           + +   G++P+ F Y + + G  K   TS A     +M+A G  P   +Y  L+ G+   
Sbjct: 475 HYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYE 534

Query: 537 GSLEEANELLRKMVGDGFI 555
           G  EEA++L  ++   G +
Sbjct: 535 GLAEEASKLSNELYSRGLV 553



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 130/458 (28%), Positives = 213/458 (46%), Gaps = 32/458 (6%)

Query: 199 MLRNGLLPDV----------------KNCNRIIKVLRDNGFSVKA--------------- 227
           M   G +PDV                KN  RI+ +L ++G  + A               
Sbjct: 95  MTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYCKSGE 154

Query: 228 -REVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
             E  R++    + P+  TY+ +L S C  G++++A+++L       C P+ VT  VLI 
Sbjct: 155 IEEALRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLID 214

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
              +   + QA  L  +M   G K    +YN +I G+ ++G L EA+   +++ + G   
Sbjct: 215 ATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQS 274

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
            + ++N+++  LC  GR  DA      MLRK   P ++++N L+   C+ G +G+A  + 
Sbjct: 275 DVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVL 334

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
           + +      P   ++N LI G C    ++ A +  E M+++G  PD++TY I++   CK 
Sbjct: 335 EMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKD 394

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G +  A    +++  KG  P   +Y T I G LK+G    A  L EEM  KG  PDLIT 
Sbjct: 395 GKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITC 454

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
             +V GL + G + EA +    + G G  P+   Y SI+    +        D   +M+ 
Sbjct: 455 TSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVA 514

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
            G  PT  +YT LI      G  E A    +E+  +G+
Sbjct: 515 NGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRGL 552



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 122/413 (29%), Positives = 206/413 (49%), Gaps = 3/413 (0%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           ++L+  Y K   +E+ L V +      + P+    + ++  L D G   +A +V     +
Sbjct: 143 NVLINAYCKSGEIEEALRVLD---HTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQ 199

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
               P +VT   ++D+ CKE  + +A++L  EM+G+GC P+ VTYNVLI GF + G L++
Sbjct: 200 SKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDE 259

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A   ++ +   G +    S+N I+      G  ++A+ L   M+ +G  P++ T+NILI 
Sbjct: 260 AIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILIN 319

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
            LC+ G +  A +    M +    P+  S+N L+ G+C    I  A    + + SR   P
Sbjct: 320 FLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYP 379

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
            +VTYN L+  LC+ G ++ A  +   + ++G  P +I+Y  +++G  K+G   +A E  
Sbjct: 380 DIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELL 439

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
            EM  KGL+PD    T+ + G  + G   EA +    +   G  P+   YN ++ GLCK 
Sbjct: 440 EEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKA 499

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
                A + L  MV +G  P   +YT++I      G       L N +  +GL
Sbjct: 500 QQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRGL 552



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/432 (25%), Positives = 204/432 (47%), Gaps = 3/432 (0%)

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           RNGELE+    +  M   G      +   +I  + + G    A  +   +   G      
Sbjct: 81  RNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDAN 140

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           +YN+LI   CK G + +A  R  +    +V P+  +Y+ +L   C  G + +A  + D  
Sbjct: 141 SYNVLINAYCKSGEIEEAL-RVLD--HTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQ 197

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
                 P VVT   LID  C+   +  A +L   M  +G  PDV+TY +++ G CK G L
Sbjct: 198 LQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRL 257

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A  F  ++   G Q D  ++   +      G   +A +L   ML KG  P ++T+N+L
Sbjct: 258 DEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNIL 317

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           ++ LC+ G L +A  +L  M   G  P+  ++  +I        + R  +    M+ +G 
Sbjct: 318 INFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGC 377

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
            P +VTY +L+ A    G+++ A +  S++  KG  P++I+YN +I+GL ++ + + A  
Sbjct: 378 YPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVE 437

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQL 709
           L  +M  +G+ P+  T T ++      G   EA++ +  +    I+P+   ++++++   
Sbjct: 438 LLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLC 497

Query: 710 DKDYKVHAVEYL 721
                  A+++L
Sbjct: 498 KAQQTSLAIDFL 509



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 126/244 (51%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           S+   ++L+    +K ++ + L V   M ++G  P+ ++ N +I+   +     +A E  
Sbjct: 310 SVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHL 369

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
            +M   G  P IVTYN +L + CK+G++ +A+ +L ++  +GCSP+ ++YN +I G  + 
Sbjct: 370 EIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKV 429

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G+ E A  L+ +M   GLK    +   ++ G S +G + EA+     +   G+ P    Y
Sbjct: 430 GKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIY 489

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           N ++ GLCK  + S A     +M+     P   SY TL+ G    G   EA  L +EL S
Sbjct: 490 NSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYS 549

Query: 412 RNLV 415
           R LV
Sbjct: 550 RGLV 553


>gi|296081018|emb|CBI18522.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 154/506 (30%), Positives = 257/506 (50%), Gaps = 37/506 (7%)

Query: 222 GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY 281
           G  V+A   ++ M E GI P  V+Y  ++D F +EG +++A+  L +M+  G  PN VTY
Sbjct: 172 GVLVEAIRKHKEMIEKGIAPDTVSYTILIDGFSREGYVEKAIGFLEKMKKDGLKPNLVTY 231

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
             ++ GF + G+L++A  L + +  LG++V    Y  +I G+  +G +     L E+M  
Sbjct: 232 TAIMLGFCKKGKLDEAYTLFKMVENLGIEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEK 291

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
           RG++P++ TYN +I GLCK GR S+A     + + K +  D ++++TLL+GY    N+  
Sbjct: 292 RGISPSIVTYNSIINGLCKAGRTSEA-----DEVSKGIAGDAVTFSTLLHGYIEEENVKG 346

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
                  L    +   +V  NT+I  L   G LE A    + M    ++ D +TY  M+N
Sbjct: 347 ILETKRRLEEDGVCIDLVMCNTIIKALLMVGALEDAYAFYKGMSGMDLVADSVTYCTMIN 406

Query: 462 GSCKMGNLSMAREFFNEM------------LRKGLQPD-------------RFAYTTQIA 496
           G C++  +  A E F+E             +++G  P                A+   + 
Sbjct: 407 GYCRVSRIEEALEIFDEFRKTSISSCYLFFVQEGFFPGCMRSIHENEKETITVAFPVSVL 466

Query: 497 GELKL-GDTSEAYRL---QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
             LK  G   +AY+L    EE L      DL+ Y++++  LCK G L++A +L   +   
Sbjct: 467 KSLKKNGRILDAYKLVIGAEENLP---VMDLVDYSIMIDVLCKEGHLDKALDLCAFVKKK 523

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
           G   +   Y S+I+     G L +   LF+++ +  L P+ +TY  LI +    G L  A
Sbjct: 524 GIALNIYAYNSVINGLCRQGCLVQAFRLFDSLEKIDLVPSEITYATLIDSLCKEGCLLDA 583

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
              F +M +KG  PNV  YN+LI+G C+   +++A  L ID++   I P+++T + LIN 
Sbjct: 584 KQLFEKMVIKGFNPNVRVYNSLIDGYCKFGNMEEALNLLIDLKARCIKPDEFTVSALING 643

Query: 673 NCNAGNWQEALRLYKEMLDREIEPDY 698
            C+ G+ + AL  + E   ++I PD+
Sbjct: 644 YCHKGDMEGALGFFFEFKKKDILPDF 669



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 136/494 (27%), Positives = 246/494 (49%), Gaps = 33/494 (6%)

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           ++P+I T   +L +  + G ++E  +L+  M+      + V Y+  I G+ R G L +A 
Sbjct: 119 LRPNIATCTALLGALFQLGRVREVSDLVSWMEREEFVFDVVFYSSWICGYFREGVLVEAI 178

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
              ++M++ G+     SY  +I G+S +G + +A+   E+M   G+ P L TY  ++ G 
Sbjct: 179 RKHKEMIEKGIAPDTVSYTILIDGFSREGYVEKAIGFLEKMKKDGLKPNLVTYTAIMLGF 238

Query: 359 CKWGRVSDARHRFFEMLRK-NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           CK G++ +A +  F+M+    +  D   Y TL+ G+C  G+I   F L +++  R + P+
Sbjct: 239 CKKGKLDEA-YTLFKMVENLGIEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPS 297

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           +VTYN++I+GLC+ G    A +     +++GI  D +T++ +++G  +  N+    E   
Sbjct: 298 IVTYNSIINGLCKAGRTSEADE-----VSKGIAGDAVTFSTLLHGYIEEENVKGILETKR 352

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            +   G+  D     T I   L +G   +AY   + M       D +TY  +++G C++ 
Sbjct: 353 RLEEDGVCIDLVMCNTIIKALLMVGALEDAYAFYKGMSGMDLVADSVTYCTMINGYCRVS 412

Query: 538 SLEEANEL---LRK---------MVGDGFIP---------DHITYTSIIHASLEMGDLRR 576
            +EEA E+    RK          V +GF P         +  T T     S+     + 
Sbjct: 413 RIEEALEIFDEFRKTSISSCYLFFVQEGFFPGCMRSIHENEKETITVAFPVSVLKSLKKN 472

Query: 577 GRDLFNNMLRKGLSPT-----LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
           GR L    L  G         LV Y+++I      G L+ A    + ++ KGI  N+  Y
Sbjct: 473 GRILDAYKLVIGAEENLPVMDLVDYSIMIDVLCKEGHLDKALDLCAFVKKKGIALNIYAY 532

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           N++INGLCR   + QA+ LF  +E+  ++P++ TY  LI+  C  G   +A +L+++M+ 
Sbjct: 533 NSVINGLCRQGCLVQAFRLFDSLEKIDLVPSEITYATLIDSLCKEGCLLDAKQLFEKMVI 592

Query: 692 REIEPDYCTHSALL 705
           +   P+   +++L+
Sbjct: 593 KGFNPNVRVYNSLI 606



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 129/532 (24%), Positives = 236/532 (44%), Gaps = 69/532 (12%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEM---------------------------- 269
           GI PS  T+++++ SF  +G+M  A+E+L  M                            
Sbjct: 45  GILPSSFTFHSLIHSFTSQGKMSRAIEVLELMTHDKVRYPFGNFVSSSVISGFCKISKPQ 104

Query: 270 ----------QGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI 319
                       R   PN  T   L+    + G + +   L+  M +         Y+  
Sbjct: 105 LAVGFFENAVNSRVLRPNIATCTALLGALFQLGRVREVSDLVSWMEREEFVFDVVFYSSW 164

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           ICGY  +G+LVEA+   +EM+ +G+AP   +Y ILI G  + G V  A     +M +  +
Sbjct: 165 ICGYFREGVLVEAIRKHKEMIEKGIAPDTVSYTILIDGFSREGYVEKAIGFLEKMKKDGL 224

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
            P++++Y  ++ G+C+ G + EA+ LF  + +  +      Y TLIDG C  GD++    
Sbjct: 225 KPNLVTYTAIMLGFCKKGKLDEAYTLFKMVENLGIEVDEFMYVTLIDGFCTRGDIDCVFG 284

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           L E+M  +GI P ++TY  ++NG CK G  S A E     + KG+  D   ++T + G +
Sbjct: 285 LLEDMEKRGISPSIVTYNSIINGLCKAGRTSEADE-----VSKGIAGDAVTFSTLLHGYI 339

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           +  +       +  +   G   DL+  N ++  L  +G+LE+A    + M G   + D +
Sbjct: 340 EEENVKGILETKRRLEEDGVCIDLVMCNTIIKALLMVGALEDAYAFYKGMSGMDLVADSV 399

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV---------------------TYTV 598
           TY ++I+    +  +    ++F+   +  +S   +                     T TV
Sbjct: 400 TYCTMINGYCRVSRIEEALEIFDEFRKTSISSCYLFFVQEGFFPGCMRSIHENEKETITV 459

Query: 599 -----LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
                ++ +    GR+  A+      +      +++ Y+ +I+ LC+   +D+A  L   
Sbjct: 460 AFPVSVLKSLKKNGRILDAYKLVIGAEENLPVMDLVDYSIMIDVLCKEGHLDKALDLCAF 519

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           ++++GI  N Y Y  +IN  C  G   +A RL+  +   ++ P   T++ L+
Sbjct: 520 VKKKGIALNIYAYNSVINGLCRQGCLVQAFRLFDSLEKIDLVPSEITYATLI 571



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 131/499 (26%), Positives = 218/499 (43%), Gaps = 68/499 (13%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           ++++  VE+ +    KM ++GL P++     I+      G   +A  +++M+   GI+  
Sbjct: 203 FSREGYVEKAIGFLEKMKKDGLKPNLVTYTAIMLGFCKKGKLDEAYTLFKMVENLGIEVD 262

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
              Y T++D FC  G++     LL +M+ RG SP+ VTYN +I G  + G   +A     
Sbjct: 263 EFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSIVTYNSIINGLCKAGRTSEA----- 317

Query: 303 DMLKLGLKVSAHSYNPIICGYSE----KGLLVEALNLEEEMVT----------------- 341
           D +  G+   A +++ ++ GY E    KG+L     LEE+ V                  
Sbjct: 318 DEVSKGIAGDAVTFSTLLHGYIEEENVKGILETKRRLEEDGVCIDLVMCNTIIKALLMVG 377

Query: 342 ---------RGVA-----PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI---- 383
                    +G++         TY  +I G C+  R+ +A    F+  RK  I       
Sbjct: 378 ALEDAYAFYKGMSGMDLVADSVTYCTMINGYCRVSRIEEALE-IFDEFRKTSISSCYLFF 436

Query: 384 ------------ISYN-----------TLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
                       I  N           ++L    ++G I +A+ L         V  +V 
Sbjct: 437 VQEGFFPGCMRSIHENEKETITVAFPVSVLKSLKKNGRILDAYKLVIGAEENLPVMDLVD 496

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y+ +ID LC+ G L+ A  L   +  +GI  ++  Y  ++NG C+ G L  A   F+ + 
Sbjct: 497 YSIMIDVLCKEGHLDKALDLCAFVKKKGIALNIYAYNSVINGLCRQGCLVQAFRLFDSLE 556

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           +  L P    Y T I    K G   +A +L E+M+ KGF P++  YN L+ G CK G++E
Sbjct: 557 KIDLVPSEITYATLIDSLCKEGCLLDAKQLFEKMVIKGFNPNVRVYNSLIDGYCKFGNME 616

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA  LL  +      PD  T +++I+     GD+      F    +K + P  + +  L+
Sbjct: 617 EALNLLIDLKARCIKPDEFTVSALINGYCHKGDMEGALGFFFEFKKKDILPDFLGFMYLV 676

Query: 601 HAHAARGRLELAFMYFSEM 619
               A+GR+E A     EM
Sbjct: 677 RGLCAKGRMEEARGILREM 695



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 130/460 (28%), Positives = 214/460 (46%), Gaps = 26/460 (5%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETV-------VCVNMHGIL 159
           A   F+ VE   G++ DEF++ T+++     G +   + ++E +         V  + I+
Sbjct: 247 AYTLFKMVENL-GIEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSIVTYNSII 305

Query: 160 DVLIGGGLSSC---VSIKI------LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKN 210
           + L   G +S    VS  I         LL  Y ++  V+  L    ++  +G+  D+  
Sbjct: 306 NGLCKAGRTSEADEVSKGIAGDAVTFSTLLHGYIEEENVKGILETKRRLEEDGVCIDLVM 365

Query: 211 CNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQ 270
           CN IIK L   G    A   Y+ M    +    VTY TM++ +C+   ++EALE+  E +
Sbjct: 366 CNTIIKALLMVGALEDAYAFYKGMSGMDLVADSVTYCTMINGYCRVSRIEEALEIFDEFR 425

Query: 271 GRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLV 330
               S     Y   +      G +       ++ + +   VS      ++    + G ++
Sbjct: 426 KTSISS---CYLFFVQEGFFPGCMRSIHENEKETITVAFPVS------VLKSLKKNGRIL 476

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
           +A  L            L  Y+I+I  LCK G +  A      + +K +  +I +YN+++
Sbjct: 477 DAYKLVIGAEENLPVMDLVDYSIMIDVLCKEGHLDKALDLCAFVKKKGIALNIYAYNSVI 536

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
            G CR G + +AF LFD L   +LVP+ +TY TLID LC+ G L  A+QL E M+ +G  
Sbjct: 537 NGLCRQGCLVQAFRLFDSLEKIDLVPSEITYATLIDSLCKEGCLLDAKQLFEKMVIKGFN 596

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
           P+V  Y  +++G CK GN+  A     ++  + ++PD F  +  I G    GD   A   
Sbjct: 597 PNVRVYNSLIDGYCKFGNMEEALNLLIDLKARCIKPDEFTVSALINGYCHKGDMEGALGF 656

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
             E   K   PD + +  LV GLC  G +EEA  +LR+M+
Sbjct: 657 FFEFKKKDILPDFLGFMYLVRGLCAKGRMEEARGILREML 696



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 158/340 (46%), Gaps = 35/340 (10%)

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
           ++L S  K G + +A +L+   +      + V Y+++I    + G L++A  L   + K 
Sbjct: 464 SVLKSLKKNGRILDAYKLVIGAEENLPVMDLVDYSIMIDVLCKEGHLDKALDLCAFVKKK 523

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           G+ ++ ++YN +I G   +G LV+A  L + +    + P+  TY  LI  LCK G + DA
Sbjct: 524 GIALNIYAYNSVINGLCRQGCLVQAFRLFDSLEKIDLVPSEITYATLIDSLCKEGCLLDA 583

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
           +  F +M+ K   P++  YN+L+ GYC+ GN+ EA  L  +L++R + P   T + LI+G
Sbjct: 584 KQLFEKMVIKGFNPNVRVYNSLIDGYCKFGNMEEALNLLIDLKARCIKPDEFTVSALING 643

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML------- 480
            C  GD+E A         + ILPD + +  +V G C  G +  AR    EML       
Sbjct: 644 YCHKGDMEGALGFFFEFKKKDILPDFLGFMYLVRGLCAKGRMEEARGILREMLQTRSVLE 703

Query: 481 ---RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP----------------- 520
              R   + +  +  + I    + G   EA  +  E+ +  FP                 
Sbjct: 704 LINRVDTEIETESVESFIISLCEQGSIQEAVTVLNEVGSIFFPIGRRCRPQNRAEKEEKI 763

Query: 521 --------PDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
                   PD  +Y  L+  LC  G L EAN   R+M+ D
Sbjct: 764 YEGKGSRVPDFESYYSLIASLCSRGELLEANRKTRQMLLD 803



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 161/345 (46%), Gaps = 17/345 (4%)

Query: 367 ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF--DELRSRNLVPTVVTYNTL 424
           AR +    L KN       +++L+ G C      E  LL   D L +  ++P+  T+++L
Sbjct: 2   ARFQTHNFLNKNR-----KWDSLIRGLCVKLKDPEKALLILQDCLTNLGILPSSFTFHSL 56

Query: 425 IDGLCRYGDLEVAQQLKENMINQGI---LPDVITYTIMVNGSCKMGNLSMAREFF-NEML 480
           I      G +  A ++ E M +  +     + ++ ++ ++G CK+    +A  FF N + 
Sbjct: 57  IHSFTSQGKMSRAIEVLELMTHDKVRYPFGNFVSSSV-ISGFCKISKPQLAVGFFENAVN 115

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            + L+P+    T  +    +LG   E   L   M  + F  D++ Y+  + G  + G L 
Sbjct: 116 SRVLRPNIATCTALLGALFQLGRVREVSDLVSWMEREEFVFDVVFYSSWICGYFREGVLV 175

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA    ++M+  G  PD ++YT +I      G + +       M + GL P LVTYT ++
Sbjct: 176 EAIRKHKEMIEKGIAPDTVSYTILIDGFSREGYVEKAIGFLEKMKKDGLKPNLVTYTAIM 235

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                +G+L+ A+  F  ++  GI  +   Y  LI+G C    ID  +GL  DME+ GI 
Sbjct: 236 LGFCKKGKLDEAYTLFKMVENLGIEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGIS 295

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           P+  TY  +IN  C AG   EA     + + + I  D  T S LL
Sbjct: 296 PSIVTYNSIINGLCKAGRTSEA-----DEVSKGIAGDAVTFSTLL 335



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 99/204 (48%), Gaps = 5/204 (2%)

Query: 526 YNVLVHGLC-KLGSLEEANELLRKMVGD-GFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
           ++ L+ GLC KL   E+A  +L+  + + G +P   T+ S+IH+    G + R  ++   
Sbjct: 16  WDSLIRGLCVKLKDPEKALLILQDCLTNLGILPSSFTFHSLIHSFTSQGKMSRAIEVLEL 75

Query: 584 MLRKGLSPTLVTY--TVLIHAHAARGRLELAFMYF-SEMQVKGIRPNVITYNALINGLCR 640
           M    +      +  + +I       + +LA  +F + +  + +RPN+ T  AL+  L +
Sbjct: 76  MTHDKVRYPFGNFVSSSVISGFCKISKPQLAVGFFENAVNSRVLRPNIATCTALLGALFQ 135

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
           L R+ +   L   ME E  + +   Y+  I      G   EA+R +KEM+++ I PD  +
Sbjct: 136 LGRVREVSDLVSWMEREEFVFDVVFYSSWICGYFREGVLVEAIRKHKEMIEKGIAPDTVS 195

Query: 701 HSALLLKQLDKDYKVHAVEYLESL 724
           ++ L+     + Y   A+ +LE +
Sbjct: 196 YTILIDGFSREGYVEKAIGFLEKM 219


>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
 gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 142/472 (30%), Positives = 241/472 (51%), Gaps = 3/472 (0%)

Query: 240 KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
           K SI  ++ ++  F + G  +EAL +  EM+   CSP+      ++ G  R    +    
Sbjct: 129 KFSIGVFSLLIMEFLEMGLFEEALWVSREMK---CSPDSKACLSILNGLVRRRRFDSVWV 185

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
             + M+  GL    H Y  +     ++GL  +   L +EM + G+ P +  Y I I  LC
Sbjct: 186 DYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLC 245

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
           +  ++ +A   F  M +  V+P++ +Y+ ++ GYC++GN+ +A+ L+ E+    L+P VV
Sbjct: 246 RDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVV 305

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
            + TL+DG C+  +L  A+ L  +M+  G+ P++  Y  +++G CK GN+  A    +EM
Sbjct: 306 VFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEM 365

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
               L PD F YT  I G       +EA RL ++M  +   P   TYN L+HG CK  ++
Sbjct: 366 ESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNM 425

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           E+A +L  +M   G  P+ IT++++I     + D++    L+  M  KG+ P +VTYT L
Sbjct: 426 EQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTAL 485

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           I AH     ++ A   +S+M   GI PN  T+  L++G  +  R+  A   + +  ++  
Sbjct: 486 IDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRS 545

Query: 660 LPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDK 711
             N   +T LI   C  G    A R + +M    I PD C++ ++L   L +
Sbjct: 546 CWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQE 597



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 147/492 (29%), Positives = 246/492 (50%), Gaps = 5/492 (1%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK-VLRDNGFSVKAREV 230
           SI +  LL++ + +  + E+ L V  +M      PD K C  I+  ++R   F     + 
Sbjct: 131 SIGVFSLLIMEFLEMGLFEEALWVSREM---KCSPDSKACLSILNGLVRRRRFDSVWVD- 186

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
           Y++M   G+ P +  Y  +     K+G   +  +LL EM   G  PN   Y + I    R
Sbjct: 187 YQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCR 246

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
           + ++E+A  +   M K G+  + ++Y+ +I GY + G + +A  L +E++   + P +  
Sbjct: 247 DNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVV 306

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           +  L+ G CK   +  AR  F  M++  V P++  YN L++G+C+SGN+ EA  L  E+ 
Sbjct: 307 FGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEME 366

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
           S NL P V TY  LI+GLC    +  A +L + M N+ I P   TY  +++G CK  N+ 
Sbjct: 367 SLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNME 426

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            A +  +EM   G++P+   ++T I G   + D   A  L  EM  KG  PD++TY  L+
Sbjct: 427 QALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALI 486

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
               K  +++EA  L   M+  G  P+  T+  ++    + G L    D +    ++   
Sbjct: 487 DAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSC 546

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
              V +T LI      G +  A  +FS+M+  GI P++ +Y +++ G  + +RI     L
Sbjct: 547 WNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMML 606

Query: 651 FIDMEEEGILPN 662
             DM + GILPN
Sbjct: 607 QCDMIKTGILPN 618



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 150/553 (27%), Positives = 272/553 (49%), Gaps = 24/553 (4%)

Query: 93  LVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVC 152
           L+  L R  E   ++ R F  +E     K    VF  ++   +E GL   A WV   + C
Sbjct: 101 LIERLKRHSEPSNMSHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMKC 160

Query: 153 VN--------MHGIL------------DVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQC 192
                     ++G++             ++I  GL     + I  +L     K+ +  + 
Sbjct: 161 SPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVP--DVHIYFVLFQCCFKQGLYSKK 218

Query: 193 LLVFNKMLRNGLLPDVKNCN-RIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLD 251
             + ++M   G+ P+V      I+ + RDN    +A +++ +M + G+ P++ TY+ M+D
Sbjct: 219 EKLLDEMTSLGIKPNVYIYTIYILDLCRDNKME-EAEKMFELMKKHGVLPNLYTYSAMID 277

Query: 252 SFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKV 311
            +CK G +++A  L  E+      PN V +  L+ GF +  EL  AR L   M+K G+  
Sbjct: 278 GYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDP 337

Query: 312 SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRF 371
           + + YN +I G+ + G ++EA+ L  EM +  ++P + TY ILI GLC   +V++A   F
Sbjct: 338 NLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLF 397

Query: 372 FEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY 431
            +M  + + P   +YN+L++GYC+  N+ +A  L  E+ +  + P ++T++TLIDG C  
Sbjct: 398 QKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNV 457

Query: 432 GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAY 491
            D++ A  L   M  +GI+PDV+TYT +++   K  N+  A   +++ML  G+ P+   +
Sbjct: 458 RDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTF 517

Query: 492 TTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
              + G  K G  S A    +E   +    + + +  L+ GLC+ G +  A+     M  
Sbjct: 518 ACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRS 577

Query: 552 DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLEL 611
            G  PD  +Y S++   L+   +     L  +M++ G+ P L+   +L   + A G ++ 
Sbjct: 578 CGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKS 637

Query: 612 AFMYFSEMQVKGI 624
           A    +  ++K +
Sbjct: 638 ACFLTNSSRLKTV 650



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 116/274 (42%), Gaps = 43/274 (15%)

Query: 470 SMAREFFNEMLRKGLQPDRFA---YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           +M+   FN +  + +Q  +F+   ++  I   L++G   EA  +  EM      PD    
Sbjct: 113 NMSHRLFNAL--EDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMKCS---PDSKAC 167

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
             +++GL +    +      + M+  G +PD   Y  +     + G   +   L + M  
Sbjct: 168 LSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTS 227

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
            G+ P +  YT+ I       ++E A   F  M+  G+ PN+ TY+A+I+G C+   + Q
Sbjct: 228 LGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQ 287

Query: 647 AYG-----------------------------------LFIDMEEEGILPNKYTYTILIN 671
           AYG                                   LF+ M + G+ PN Y Y  LI+
Sbjct: 288 AYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIH 347

Query: 672 ENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            +C +GN  EA+ L  EM    + PD  T++ L+
Sbjct: 348 GHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILI 381


>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 526

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 151/488 (30%), Positives = 249/488 (51%), Gaps = 11/488 (2%)

Query: 216 KVLRDNGFSVK---AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR 272
           ++LR+   S++   A +++  M E    PSI+ +  +L+   K  +    + L   +Q  
Sbjct: 41  EILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIM 100

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA 332
           G S +  T N+L+  F ++ +   A   +  ++KLG +    ++  +I G+     + EA
Sbjct: 101 GVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEA 160

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
           +++  +MV  G+ P +  Y  +I  LCK G V +A   F +M    + PD++ Y +L+ G
Sbjct: 161 MSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNG 220

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
            C SG   +A LL   +  R + P V+T+N LID   + G L  A++L   MI   I P+
Sbjct: 221 LCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPN 280

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
           + TYT ++NG C  G L  AR+ F  M  KG  PD  AYT+ I G  K     +A ++  
Sbjct: 281 IFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFY 340

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           EM  KG   + ITY  L+ G   +G    A E+   MV  G  P+  TY  ++H     G
Sbjct: 341 EMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNG 400

Query: 573 DLRRGRDLFNNMLRK---GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
            + +   +F +M ++   G+ P + TY VL+H     G+LE A M F +MQ + +   +I
Sbjct: 401 KVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGII 460

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           TY  +I G+C+  ++  A  LF  +  +G+ PN  TYT +I     +G ++E L L   +
Sbjct: 461 TYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMI-----SGLFREGLMLEAHV 515

Query: 690 LDREIEPD 697
           L R+++ D
Sbjct: 516 LFRKMKED 523



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 144/473 (30%), Positives = 256/473 (54%), Gaps = 5/473 (1%)

Query: 191 QCLLVFNKMLRNGLLPDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           + L +F+ M+ +  LP + +  R++ V+ +   F V    + + +   G+   + T N +
Sbjct: 54  EALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDV-VINLCKHLQIMGVSNDLYTCNLL 112

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           ++ FC+  +   A   L ++   G  P+  T+  LI GF     +E+A  ++  M+++G+
Sbjct: 113 MNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGI 172

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
           K     Y  II    + G +  AL+L  +M   G+ P +  Y  L+ GLC  GR  DA  
Sbjct: 173 KPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADL 232

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
               M+++ + PD+I++N L+  + + G + +A  L++E+   ++ P + TY +LI+GLC
Sbjct: 233 LLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLC 292

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
             G L+ A+Q+   M  +G  PDV+ YT ++NG CK   +  A + F EM +KGL  +  
Sbjct: 293 MEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTI 352

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA---NELL 546
            YTT I G   +G  + A  +   M+++G PP++ TYNVL+H LC  G + +A    E +
Sbjct: 353 TYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDM 412

Query: 547 RKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAAR 606
           +K   DG  P+  TY  ++H     G L +   +F +M ++ +   ++TYT++I      
Sbjct: 413 QKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKA 472

Query: 607 GRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           G+++ A   F  +  KG++PNV+TY  +I+GL R   + +A+ LF  M+E+G+
Sbjct: 473 GKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGV 525



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 139/499 (27%), Positives = 261/499 (52%), Gaps = 7/499 (1%)

Query: 213 RIIKVLRD--NGFSVKAREVYRMMG-EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM 269
           R + + RD   G S KA    R++G  F ++ +   Y  +L +     +  EAL+L   M
Sbjct: 4   RFLHLHRDLVKGNSGKALSFSRLLGLSFWVR-AFCNYREILRNGLHSLQFNEALDLFSHM 62

Query: 270 QGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLL 329
                 P+ + +  L+   ++  + +    L + +  +G+    ++ N ++  + +    
Sbjct: 63  VESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQP 122

Query: 330 VEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTL 389
             A +   +++  G  P + T+  LI G C   R+ +A     +M+   + PD++ Y T+
Sbjct: 123 CLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTI 182

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
           +   C++G++  A  LF+++ +  + P VV Y +L++GLC  G    A  L   M+ + I
Sbjct: 183 IDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKI 242

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
            PDVIT+  +++   K G L  A+E +NEM++  + P+ F YT+ I G    G   EA +
Sbjct: 243 KPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQ 302

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           +   M  KG  PD++ Y  L++G CK   +E+A ++  +M   G   + ITYT++I    
Sbjct: 303 MFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFG 362

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ---VKGIRP 626
            +G     +++F +M+ +G+ P + TY VL+H     G++  A M F +MQ   + G+ P
Sbjct: 363 LVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPP 422

Query: 627 NVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLY 686
           N+ TYN L++GLC   ++++A  +F DM++  +     TYTI+I   C AG  ++AL L+
Sbjct: 423 NIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLF 482

Query: 687 KEMLDREIEPDYCTHSALL 705
             +  + ++P+  T++ ++
Sbjct: 483 CSLPSKGVKPNVVTYTTMI 501



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 122/401 (30%), Positives = 209/401 (52%), Gaps = 13/401 (3%)

Query: 198 KMLRNGLLPDVKNCNRIIKVLRDNGFSV-----KAREVYRMMGEFGIKPSIVTYNTMLDS 252
           K+++ G  PD+     +I     NGF +     +A  +   M E GIKP +V Y T++DS
Sbjct: 131 KLMKLGFEPDIFTFTSLI-----NGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDS 185

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
            CK G +  AL L  +M+  G  P+ V Y  L+ G   +G    A  L+R M+K  +K  
Sbjct: 186 LCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPD 245

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
             ++N +I  + ++G L++A  L  EM+   +AP + TY  LI GLC  GR+ +AR  F+
Sbjct: 246 VITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFY 305

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
            M  K   PD+++Y +L+ G+C+   + +A  +F E+  + L    +TY TLI G    G
Sbjct: 306 LMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVG 365

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK---GLQPDRF 489
              VAQ++  +M+++G+ P++ TY ++++  C  G ++ A   F +M ++   G+ P+  
Sbjct: 366 KPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIR 425

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
            Y   + G    G   +A  +  +M  +     +ITY +++ G+CK G +++A  L   +
Sbjct: 426 TYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSL 485

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
              G  P+ +TYT++I      G +     LF  M   G+S
Sbjct: 486 PSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGVS 526



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/368 (31%), Positives = 192/368 (52%), Gaps = 3/368 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +E+ + + N+M+  G+ PDV     II  L  NG    A  ++  M  +GI+P +V Y +
Sbjct: 157 IEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTS 216

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++  C  G  ++A  LL  M  R   P+ +T+N LI  F + G+L  A+ L  +M+++ 
Sbjct: 217 LVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMS 276

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           +  +  +Y  +I G   +G L EA  +   M T+G  P +  Y  LI G CK  +V DA 
Sbjct: 277 IAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAM 336

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F+EM +K +  + I+Y TL+ G+   G    A  +F  + SR + P + TYN L+  L
Sbjct: 337 KIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCL 396

Query: 429 CRYGDLEVAQQLKENMINQ---GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           C  G +  A  + E+M  +   G+ P++ TY ++++G C  G L  A   F +M ++ + 
Sbjct: 397 CYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMD 456

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
                YT  I G  K G   +A  L   + +KG  P+++TY  ++ GL + G + EA+ L
Sbjct: 457 IGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVL 516

Query: 546 LRKMVGDG 553
            RKM  DG
Sbjct: 517 FRKMKEDG 524



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 201/373 (53%), Gaps = 23/373 (6%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGIL-DVLIGGGLSS--CVSIKI 175
           G+K D  ++ TI++ L ++G + +A  +      +  +GI  DV++   L +  C S + 
Sbjct: 171 GIKPDVVIYTTIIDSLCKNGHVDNALSLFNQ---MENYGIRPDVVMYTSLVNGLCNSGRW 227

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
            D  LL+                M++  + PDV   N +I      G  + A+E+Y  M 
Sbjct: 228 RDADLLL--------------RGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMI 273

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
           +  I P+I TY ++++  C EG + EA ++ + M+ +GC P+ V Y  LI GF +  ++E
Sbjct: 274 QMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVE 333

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
            A  +  +M + GL  +  +Y  +I G+   G    A  +   MV+RGV P + TYN+L+
Sbjct: 334 DAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLL 393

Query: 356 YGLCKWGRVSDARHRFFEMLRK---NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
           + LC  G+V+ A   F +M ++    V P+I +YN LL+G C +G + +A ++F +++ R
Sbjct: 394 HCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKR 453

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
           ++   ++TY  +I G+C+ G ++ A  L  ++ ++G+ P+V+TYT M++G  + G +  A
Sbjct: 454 DMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEA 513

Query: 473 REFFNEMLRKGLQ 485
              F +M   G+ 
Sbjct: 514 HVLFRKMKEDGVS 526



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 178/337 (52%), Gaps = 3/337 (0%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   V+  L +FN+M   G+ PDV     ++  L ++G    A  + R M +  IKP ++
Sbjct: 188 KNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVI 247

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           T+N ++D+F KEG++ +A EL  EM     +PN  TY  LI G    G L++AR +   M
Sbjct: 248 TFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLM 307

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
              G      +Y  +I G+ +   + +A+ +  EM  +G+     TY  LI G    G+ 
Sbjct: 308 ETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKP 367

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL---VPTVVTY 421
           + A+  F  M+ + V P+I +YN LL+  C +G + +A ++F++++ R +    P + TY
Sbjct: 368 NVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTY 427

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           N L+ GLC  G LE A  +  +M  + +   +ITYTI++ G CK G +  A   F  +  
Sbjct: 428 NVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPS 487

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           KG++P+   YTT I+G  + G   EA+ L  +M   G
Sbjct: 488 KGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDG 524


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 129/431 (29%), Positives = 235/431 (54%), Gaps = 1/431 (0%)

Query: 260 QEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI 319
           ++AL+L  EM      P+ V +  L+T  +     E      + M   G+    +S+  +
Sbjct: 47  EDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTIL 106

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           I  +     L  AL++  +M+  G  P++ T+  L++G C   R+ DA      M++   
Sbjct: 107 IHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGY 166

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN-LVPTVVTYNTLIDGLCRYGDLEVAQ 438
            P+++ YNTL+   C++G++  A  L +E+  +  L   +VTYNTL+ GLC  G+   A 
Sbjct: 167 EPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAA 226

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
           ++  +M  + I PDV T+T +++   K GNL  A+E + +ML+  + P+   Y + I G 
Sbjct: 227 RILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGL 286

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
              G    A +  + M +KG  P+++TYN L++G CK   +E+  +L ++M  +G + D 
Sbjct: 287 CMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDT 346

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
            TY ++IH   ++G LR  +D+F+ M+  G++P ++T+ +L+H     G +  A + F++
Sbjct: 347 FTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFND 406

Query: 619 MQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGN 678
           M+       ++ YN +I+GLC+  ++++A+ LF  +  EG+ P+  TYTI+I   C  G 
Sbjct: 407 MRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGP 466

Query: 679 WQEALRLYKEM 689
            +EA  L++ M
Sbjct: 467 RREADELFRRM 477



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 126/384 (32%), Positives = 206/384 (53%)

Query: 178  LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
            +L+  + + S     L +  KM++ G  P +     ++          +A  +   M E 
Sbjct: 655  ILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAEL 714

Query: 238  GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
            G++P++V YNT+++  CK  ++  ALE+ + M+ +G   + VTYN LI+G   +G    A
Sbjct: 715  GLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDA 774

Query: 298  RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
              L+RDM+K  +  +   +  +I  + ++G L+EA NL +EM+ R V P + TYN LI G
Sbjct: 775  ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLING 834

Query: 358  LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
             C  GR+ DA+H F  M+ K   PD+++YNTL+ G+C+S  + +   LF E+  + LV  
Sbjct: 835  FCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGD 894

Query: 418  VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
              TYNTLI G C+ G L VAQ++   M++ G+ PD++TY I+++  C  G +  A     
Sbjct: 895  AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVE 954

Query: 478  EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            ++ +  +  D   Y   I G  +     EA+ L   +  KG   D I Y  ++ GLC+ G
Sbjct: 955  DLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNG 1014

Query: 538  SLEEANELLRKMVGDGFIPDHITY 561
               EA++L  +M  DGF+P    Y
Sbjct: 1015 LRREADKLCTRMKEDGFMPSERIY 1038



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 129/428 (30%), Positives = 222/428 (51%), Gaps = 4/428 (0%)

Query: 241  PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
            PSIV +  +L +  K  +    + L  +M+  G S +  ++ +LI  F R      A  L
Sbjct: 613  PSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALAL 672

Query: 301  IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
            +  M+KLG + S  +   ++ G+ +     EA++L + M   G+ P +  YN +I GLCK
Sbjct: 673  LGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCK 732

Query: 361  WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
               +++A   F+ M +K ++ D ++YNTL+ G C SG   +A  L  ++  R + P V+ 
Sbjct: 733  NRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIF 792

Query: 421  YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
            +  LID   + G+L  A+ L + MI + + P+++TY  ++NG C  G L  A+  F+ M+
Sbjct: 793  FTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMV 852

Query: 481  RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
             KG  PD   Y T I G  K     +  +L  EM  +G   D  TYN L+HG C+ G L 
Sbjct: 853  SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLN 912

Query: 541  EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
             A ++  +MV  G  PD +TY  ++      G + +   +  ++ +  +   ++TY ++I
Sbjct: 913  VAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIII 972

Query: 601  HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR--LRRIDQAYGLFIDMEEEG 658
                   +++ A+  F  +  KG++ + I Y  +I+GLCR  LRR  +A  L   M+E+G
Sbjct: 973  QGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRR--EADKLCTRMKEDG 1030

Query: 659  ILPNKYTY 666
             +P++  Y
Sbjct: 1031 FMPSERIY 1038



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 158/574 (27%), Positives = 264/574 (45%), Gaps = 59/574 (10%)

Query: 191 QCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTML 250
           Q   +   M +  + PDV     +I      G   +A+E+Y+ M +  I P+ VTYN+++
Sbjct: 224 QAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLI 283

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
           +  C  G +  A +    M  +GC PN VTYN LI GF ++  +E    L + M + GL 
Sbjct: 284 NGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLV 343

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
               +YN +I GY + G L  A ++   MV+ GV P + T+ IL++GLC  G +  A  +
Sbjct: 344 GDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVK 403

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
           F +M        I++YN +++G C++  + EA+ LF  L    + P   TY  +I GLC+
Sbjct: 404 FNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCK 463

Query: 431 YGDL----EVAQQLKENMI---------------NQGILPDVIT-----YTIMVNGS--- 463
            G      E+ +++KE+ I               NQ  L  +I       +IM +G    
Sbjct: 464 NGPRREADELFRRMKEDGIICQAEDGHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYY 523

Query: 464 --------------CKMGNLSMAREFFNE---MLRKGLQPDRFA---------------Y 491
                           + + S  + F      +L +G  P+  +               Y
Sbjct: 524 YYSDTTLWSSLVGLIPIASSSSVKGFVRRHLLLLERGNNPESRSFSGASHHHHHHHHHHY 583

Query: 492 TTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
             ++  EL      +A+ L  EML     P ++ +  ++  + K+   +    L  KM  
Sbjct: 584 RERLRSELHCIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMEN 643

Query: 552 DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLEL 611
            G   D  ++T +IH             L   M++ G  P++VT   L++      R + 
Sbjct: 644 LGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQE 703

Query: 612 AFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
           A      M   G+ PNV+ YN +INGLC+ R ++ A  +F  ME++GI+ +  TY  LI+
Sbjct: 704 AVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLIS 763

Query: 672 ENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             CN+G W +A RL ++M+ R+I+P+    +AL+
Sbjct: 764 GLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 797



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 133/426 (31%), Positives = 220/426 (51%), Gaps = 2/426 (0%)

Query: 179  LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEF 237
            +L    K +  +  + +F+KM   G+  D+ +   +I    R + FS+    + +MM + 
Sbjct: 621  VLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMM-KL 679

Query: 238  GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
            G +PSIVT  ++L+ FC+    QEA+ L+  M   G  PN V YN +I G  +N +L  A
Sbjct: 680  GFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNA 739

Query: 298  RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
              +   M K G+   A +YN +I G    G   +A  L  +MV R + P +  +  LI  
Sbjct: 740  LEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDT 799

Query: 358  LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
              K G + +A++ + EM+R++V P+I++YN+L+ G+C  G +G+A  +FD + S+   P 
Sbjct: 800  FVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPD 859

Query: 418  VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
            VVTYNTLI G C+   +E   +L   M +QG++ D  TY  +++G C+ G L++A++ FN
Sbjct: 860  VVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFN 919

Query: 478  EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
             M+  G+ PD   Y   +      G   +A  + E++       D+ITYN+++ G+C+  
Sbjct: 920  RMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRND 979

Query: 538  SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
             ++EA  L R +   G   D I Y ++I      G  R    L   M   G  P+   Y 
Sbjct: 980  KVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYD 1039

Query: 598  VLIHAH 603
              +  H
Sbjct: 1040 ETLRDH 1045



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 125/439 (28%), Positives = 223/439 (50%)

Query: 258  EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
            +  +A  L  EM      P+ V +  ++T  ++  + +    L   M  LG+    +S+ 
Sbjct: 595  KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFT 654

Query: 318  PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
             +I  +        AL L  +M+  G  P++ T   L+ G C+  R  +A      M   
Sbjct: 655  ILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAEL 714

Query: 378  NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
             + P+++ YNT++ G C++ ++  A  +F  +  + +V   VTYNTLI GLC  G    A
Sbjct: 715  GLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDA 774

Query: 438  QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
             +L  +M+ + I P+VI +T +++   K GNL  A+  + EM+R+ + P+   Y + I G
Sbjct: 775  ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLING 834

Query: 498  ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
                G   +A  + + M++KG  PD++TYN L+ G CK   +E+  +L  +M   G + D
Sbjct: 835  FCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGD 894

Query: 558  HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
              TY ++IH   + G L   + +FN M+  G+ P +VTY +L+      G++E A +   
Sbjct: 895  AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVE 954

Query: 618  EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
            ++Q   +  ++ITYN +I G+CR  ++ +A+ LF  +  +G+  +   Y  +I+  C  G
Sbjct: 955  DLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNG 1014

Query: 678  NWQEALRLYKEMLDREIEP 696
              +EA +L   M +    P
Sbjct: 1015 LRREADKLCTRMKEDGFMP 1033



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 131/421 (31%), Positives = 214/421 (50%), Gaps = 1/421 (0%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PS+V +  +L +       +  +    +M+  G S +  ++ +LI  F R   L  A  +
Sbjct: 63  PSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSI 122

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  M+KLG   S  ++  ++ G+  +  + +A +L   MV  G  P +  YN LI  LCK
Sbjct: 123 LGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCK 182

Query: 361 WGRVSDARHRFFEMLRKN-VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
            G V+ A     EM +K  +  D+++YNTLL G C SG   +A  +  ++  R + P V 
Sbjct: 183 NGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVF 242

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
           T+  LID   + G+L+ AQ+L + M+   I P+ +TY  ++NG C  G L  A++ F+ M
Sbjct: 243 TFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLM 302

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
             KG  P+   Y T I G  K     +  +L + M  +G   D  TYN L+HG C++G L
Sbjct: 303 ASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKL 362

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
             A ++   MV  G  PD IT+  ++H     G++      FN+M        +V Y ++
Sbjct: 363 RVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIM 422

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           IH      ++E A+  F  + V+G++P+  TY  +I GLC+     +A  LF  M+E+GI
Sbjct: 423 IHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGI 482

Query: 660 L 660
           +
Sbjct: 483 I 483



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 160/592 (27%), Positives = 244/592 (41%), Gaps = 96/592 (16%)

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI-------- 285
           M + G  PSIVT+ ++L  FC    + +A  L+  M   G  PN V YN LI        
Sbjct: 126 MMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGD 185

Query: 286 ----------------------------TGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
                                       TG   +GE  QA  ++RDM K  +     ++ 
Sbjct: 186 VNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFT 245

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            +I  + ++G L EA  L ++M+   + P   TYN LI GLC  GR+  A+  F  M  K
Sbjct: 246 ALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASK 305

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
              P++++YNTL+ G+C+S  + +   LF  +    LV    TYNTLI G C+ G L VA
Sbjct: 306 GCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVA 365

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
           + +   M++ G+ PD+IT+ I+++G C  G +  A   FN+M          AY   I G
Sbjct: 366 KDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHG 425

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI-- 555
             K     EA+ L   +  +G  PD  TY +++ GLCK G   EA+EL R+M  DG I  
Sbjct: 426 LCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGIICQ 485

Query: 556 -----------PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
                       + ++  +II        +    DL+       L  +LV    +  + +
Sbjct: 486 AEDGHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYYSDTTLWSSLVGLIPIASSSS 545

Query: 605 ARG--RLELAFM---------YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
            +G  R  L  +          FS         +   Y   +       + D A+GLF +
Sbjct: 546 VKGFVRRHLLLLERGNNPESRSFSGASHHHHHHHHHHYRERLRSELHCIKFDDAFGLFCE 605

Query: 654 M-----------------------------------EEEGILPNKYTYTILINENCNAGN 678
           M                                   E  GI  + Y++TILI+  C    
Sbjct: 606 MLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSR 665

Query: 679 WQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT-LGAE 729
           +  AL L  +M+    +P   T  +LL      +    AV  ++S+  LG E
Sbjct: 666 FSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLE 717



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 127/436 (29%), Positives = 213/436 (48%), Gaps = 1/436 (0%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           E  L +F +M+++  LP V +  R++  + +           + M  FGI   + ++  +
Sbjct: 47  EDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTIL 106

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           +  FC+   +  AL +L +M   G  P+ VT+  L+ GF     +  A  L+  M+K G 
Sbjct: 107 IHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGY 166

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG-VAPTLATYNILIYGLCKWGRVSDAR 368
           + +   YN +I    + G +  AL L  EM  +G +A  L TYN L+ GLC  G    A 
Sbjct: 167 EPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAA 226

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               +M ++ + PD+ ++  L+  + + GN+ EA  L+ ++   ++ P  VTYN+LI+GL
Sbjct: 227 RILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGL 286

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C +G L  A++  + M ++G  P+V+TY  ++NG CK   +    + F  M R+GL  D 
Sbjct: 287 CMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDT 346

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
           F Y T I G  ++G    A  +   M++ G  PD+IT+ +L+HGLC  G +  A      
Sbjct: 347 FTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFND 406

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M         + Y  +IH   +   +    +LF  +  +G+ P   TYT++I      G 
Sbjct: 407 MRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGP 466

Query: 609 LELAFMYFSEMQVKGI 624
              A   F  M+  GI
Sbjct: 467 RREADELFRRMKEDGI 482



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 198/395 (50%)

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
           +A  L  EM+     P++  +  ++  + K  +     + F +M    +  D+ S+  L+
Sbjct: 598 DAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILI 657

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
           + +CR      A  L  ++      P++VT  +L++G C+    + A  L ++M   G+ 
Sbjct: 658 HCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLE 717

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
           P+V+ Y  ++NG CK  +L+ A E F  M +KG+  D   Y T I+G    G  ++A RL
Sbjct: 718 PNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARL 777

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
             +M+ +   P++I +  L+    K G+L EA  L ++M+     P+ +TY S+I+    
Sbjct: 778 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCI 837

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
            G L   + +F+ M+ KG  P +VTY  LI       R+E     F EM  +G+  +  T
Sbjct: 838 QGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFT 897

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           YN LI+G C+  +++ A  +F  M + G+ P+  TY IL++  CN G  ++AL + +++ 
Sbjct: 898 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 957

Query: 691 DREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
             +++ D  T++ ++      D    A     SLT
Sbjct: 958 KNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLT 992



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 160/350 (45%), Gaps = 36/350 (10%)

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
           G+  S    +A  LF E+     +P+VV +  L+  +      E      + M   GI  
Sbjct: 39  GFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISH 98

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           D+ ++TI+++  C+   LS+A     +M++ G  P    + + + G        +A+ L 
Sbjct: 99  DLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLV 158

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI---------------- 555
             M+  G+ P+++ YN L+  LCK G +  A ELL +M   G +                
Sbjct: 159 ASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCY 218

Query: 556 --------------------PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
                               PD  T+T++I A ++ G+L   ++L+  ML+  + P  VT
Sbjct: 219 SGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVT 278

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           Y  LI+     GRL  A   F  M  KG  PNV+TYN LING C+ RR++    LF  M 
Sbjct: 279 YNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMY 338

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            EG++ + +TY  LI+  C  G  + A  ++  M+   + PD  TH  LL
Sbjct: 339 REGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILL 388


>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 163/574 (28%), Positives = 283/574 (49%), Gaps = 11/574 (1%)

Query: 135 IESGLLRSAYWVVETVVCVNMHGILD---VLIGGGLSSCVSIKILDLLLLIYTKKSMVEQ 191
           ++S  LR A+ +++T+             +LIG        + ++ L   +  K + +++
Sbjct: 21  VKSRKLREAFDIIQTMRKFKFRPAFSAYTILIG-------KVGLMLLFPWVLCKANRLDE 73

Query: 192 CLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLD 251
            + +F ++ +N  +P     N +I      G   +A  +       G  PS++ YN +L 
Sbjct: 74  AVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILT 133

Query: 252 SFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKV 311
              K+  ++EAL +  EM+ R   PN  TYN+LI    R G+L  A  +  DM + GL  
Sbjct: 134 CLGKKRRVEEALRIFEEMK-RDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFP 192

Query: 312 SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRF 371
           +  + N +I    +   L EA ++ E M  +   P   T++ LI GL K GRV DA   +
Sbjct: 193 NVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLY 252

Query: 372 FEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY 431
            +ML    +P  I Y +L+  + + G   +   ++ E+      P +   NT +D + + 
Sbjct: 253 EKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKA 312

Query: 432 GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAY 491
           G+ E  + L   +   G +PD  +Y+I+++G  K G  +   E F  M  +G   D  AY
Sbjct: 313 GETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAY 372

Query: 492 TTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
              I G  K G  ++AY+L EEM  KG PP ++TY  ++ GL K+  L+EA  L  +   
Sbjct: 373 NAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 432

Query: 552 DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLEL 611
           +G   + + Y+S+I    ++G +     +   +++KGL+P + T+  L+ A      +  
Sbjct: 433 NGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINE 492

Query: 612 AFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
           A + F  M+     PN ITY+ LINGLCR+R+ ++A+  + +M++ G+ PN  TYT +I+
Sbjct: 493 ALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMIS 552

Query: 672 ENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
               AGN  EA  L+         PD  +++A++
Sbjct: 553 GLAKAGNILEASGLFSRFKANGGIPDSASYNAMI 586



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 150/500 (30%), Positives = 243/500 (48%), Gaps = 1/500 (0%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           S+   + +L    KK  VE+ L +F +M R+ + P+V   N +I +L   G    A E+ 
Sbjct: 124 SVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIR 182

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M   G+ P+++T N M+D  CK  +++EA  +   M  + C+PN VT++ LI G  + 
Sbjct: 183 DDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKC 242

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G ++ A  L   ML  G    A  Y  +I  + + G   +   + +EMV  G +P L   
Sbjct: 243 GRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLI 302

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           N  +  + K G     R  F E+     IPD  SY+ L++G  ++G   E + LF  ++ 
Sbjct: 303 NTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKE 362

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           +  V     YN +IDG C+ G +  A QL E M  +G  P V+TY  +++G  K+  L  
Sbjct: 363 QGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDE 422

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A   F E    G++ +   Y++ I G  K+G   EAY + EE++ KG  P++ T+N L+ 
Sbjct: 423 AYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLD 482

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
            L K   + EA    + M      P+ ITY+ +I+    +    +    +  M + GL P
Sbjct: 483 ALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKP 542

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
             +TYT +I   A  G +  A   FS  +  G  P+  +YNA+I GL    +   AY LF
Sbjct: 543 NTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALF 602

Query: 652 IDMEEEGILPNKYTYTILIN 671
            +   +G   +  T  +L++
Sbjct: 603 EETRLKGCNIHTKTCVVLLD 622



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 137/512 (26%), Positives = 248/512 (48%), Gaps = 1/512 (0%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           + +++ Y      ++   +  +    G +P V   N I+  L       +A  ++  M  
Sbjct: 94  NTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKR 153

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
             + P++ TYN ++D  C+EG++  ALE+  +M+  G  PN +T N++I    +  +LE+
Sbjct: 154 DAV-PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEE 212

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  +   M       +A +++ +I G  + G + +A +L E+M+  G  P    Y  LI 
Sbjct: 213 ACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIR 272

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
              K GR  D    + EM+     PD+   NT +    ++G   +   LF E+ +   +P
Sbjct: 273 SFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIP 332

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
              +Y+ LI GL + G      +L   M  QG + D   Y  +++G CK G ++ A +  
Sbjct: 333 DARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLL 392

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
            EM  KG  P    Y + I G  K+    EAY L EE  + G   +++ Y+ L+ G  K+
Sbjct: 393 EEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKV 452

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G ++EA  ++ +++  G  P+  T+  ++ A ++  ++      F +M      P  +TY
Sbjct: 453 GRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITY 512

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
           ++LI+      +   AF+++ EMQ  G++PN ITY  +I+GL +   I +A GLF   + 
Sbjct: 513 SILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKA 572

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKE 688
            G +P+  +Y  +I    +A    +A  L++E
Sbjct: 573 NGGIPDSASYNAMIEGLSSANKAMDAYALFEE 604



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 196/418 (46%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   +E+   +F  M      P+    + +I  L   G    A  +Y  M + G  P  +
Sbjct: 206 KAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAI 265

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
            Y +++ SF K G  ++  ++  EM   GCSP+    N  +    + GE E+ R L R++
Sbjct: 266 VYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREI 325

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
              G    A SY+ +I G  + GL  E   L   M  +G       YN +I G CK G+V
Sbjct: 326 NAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKV 385

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
           + A     EM  K   P +++Y +++ G  +   + EA++LF+E +S  +   VV Y++L
Sbjct: 386 NKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSL 445

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           IDG  + G ++ A  + E ++ +G+ P+V T+  +++   K   ++ A   F  M     
Sbjct: 446 IDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKC 505

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            P++  Y+  I G  ++   ++A+   +EM   G  P+ ITY  ++ GL K G++ EA+ 
Sbjct: 506 PPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASG 565

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
           L  +   +G IPD  +Y ++I              LF     KG +    T  VL+ A
Sbjct: 566 LFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDA 623



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 168/348 (48%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           ++ +M+  G  PD+   N  +  +   G + K R ++R +   G  P   +Y+ ++    
Sbjct: 286 IYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLV 345

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K G   E  EL + M+ +GC  +   YN +I GF ++G++ +A  L+ +M   G   +  
Sbjct: 346 KAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVV 405

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +Y  +I G ++   L EA  L EE  + G+   +  Y+ LI G  K GR+ +A     E+
Sbjct: 406 TYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEEL 465

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           ++K + P++ ++N LL    ++  I EA + F  ++     P  +TY+ LI+GLCR    
Sbjct: 466 MQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKF 525

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
             A    + M   G+ P+ ITYT M++G  K GN+  A   F+     G  PD  +Y   
Sbjct: 526 NKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAM 585

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           I G        +AY L EE   KG      T  VL+  L K   LE+A
Sbjct: 586 IEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQA 633



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 76/176 (43%), Gaps = 12/176 (6%)

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA-------- 604
           GF P       ++   ++   LR   D+   M +    P    YT+LI            
Sbjct: 5   GFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWV 64

Query: 605 --ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
                RL+ A   F +++     P    YN +I G     + D+AYGL    + +G +P+
Sbjct: 65  LCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPS 124

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAV 718
              Y  ++         +EALR+++EM  R+  P+  T++ +L+  L ++ K++A 
Sbjct: 125 VIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYN-ILIDMLCREGKLNAA 178


>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
          Length = 645

 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 153/472 (32%), Positives = 236/472 (50%), Gaps = 22/472 (4%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F++MLR GL+P V   N +I   R  G   KA+EV+  M    I P++VTY TM+ + C
Sbjct: 173 LFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALC 232

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           +EG + +A  L   M+  G  PN  TYNVL++G  +  ++  A  L +++LK GL  +A 
Sbjct: 233 EEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAV 292

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
            +  +I G+ +     EA  +  EM   GVAPT+  YN L+ G  + G   +A   + EM
Sbjct: 293 IFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEM 352

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
            R  + PD  + + ++ G C  G +  A      ++   +      YN LID  CR G+L
Sbjct: 353 TRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNL 412

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           E A      M   GI P+V++Y+ +++G  K G + +A   + EM+ KG++P+   YT  
Sbjct: 413 EEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTAL 472

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I G  K G    A+RL +EM+  G  P+ IT +VLV GLC+   ++EA   + +  G   
Sbjct: 473 IHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSG--- 529

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNML--RKGLSPTLVTYTVLIHAHAARGRLELA 612
                         L+  D+     +F+N     + L P  V Y  LI+     G+   A
Sbjct: 530 --------------LKCSDI---HSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEA 572

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
              FS M+  G+ P+  TY  LI G C L  +  A  L+ DM + G+ P +Y
Sbjct: 573 GKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKPTRY 624



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 129/406 (31%), Positives = 215/406 (52%), Gaps = 3/406 (0%)

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
           VL+   S+ G L++A  + R +  L    +  + N ++ G  +      A  L +EM+ R
Sbjct: 124 VLVIALSQMGLLDEALYVFRRLRTLP---ALPACNAVLDGLVKARRPGCAWELFDEMLRR 180

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           G+ P++ TYN LI      G V+ A+  + +M+ + + P++++Y T++   C  G IG+A
Sbjct: 181 GLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDA 240

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
             LFD ++   + P   TYN L+ G C+  D+  A  L + ++  G+ P+ + +T +++G
Sbjct: 241 ERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDG 300

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            CK    S A+  F EM R G+ P    Y + + G  + G+  EA  L +EM   G  PD
Sbjct: 301 FCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPD 360

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
             T +++V GLC  G +  A+  L+ +  DG   +   Y ++I     +G+L        
Sbjct: 361 EFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCT 420

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
            M   G+ P +V+Y+ LI  H+ RG++++A   ++EM  KGI PNV+TY ALI+G  +  
Sbjct: 421 RMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNG 480

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
            ID A+ L  +M E GI PN  T ++L++  C     QEA+R   E
Sbjct: 481 GIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVME 526



 Score =  225 bits (573), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 135/467 (28%), Positives = 218/467 (46%), Gaps = 52/467 (11%)

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
           N ++ G  +      A  L  +ML+ GL  S  +YN +I     +G + +A  + ++MV 
Sbjct: 155 NAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVA 214

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
           + + P + TY  +I  LC+ G + DA   F  M    + P+  +YN L+ G+C+  ++  
Sbjct: 215 QQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNS 274

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           A +L+ EL    L P  V + TLIDG C+      A+ +   M   G+ P V  Y  +++
Sbjct: 275 AVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMD 334

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
           G+ + GN   A   + EM R GL PD F  +  + G    G    A R  + +   G   
Sbjct: 335 GAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNL 394

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           +   YN L+   C++G+LEEA     +M   G  P+ ++Y+S+I    + G ++    ++
Sbjct: 395 NAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIY 454

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
             M+ KG+ P +VTYT LIH HA  G ++ AF    EM   GI PN IT + L++GLCR 
Sbjct: 455 TEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRE 514

Query: 642 RRIDQA----------------------------------------YGLFID-------- 653
            R+ +A                                        YGL++D        
Sbjct: 515 NRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGK 574

Query: 654 ----MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
               M + G++P+ +TYT+LI   C  G    A+ LY +M+   ++P
Sbjct: 575 LFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKP 621



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 2/123 (1%)

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR-RIDQAYG 649
           P L     ++       R   A+  F EM  +G+ P+V+TYN LIN  CR +  + +A  
Sbjct: 149 PALPACNAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINA-CRFQGTVAKAQE 207

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQL 709
           ++  M  + I PN  TYT +I   C  G   +A RL+  M +  ++P+  T++ L+    
Sbjct: 208 VWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHC 267

Query: 710 DKD 712
            +D
Sbjct: 268 QRD 270


>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 579

 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 137/438 (31%), Positives = 231/438 (52%), Gaps = 5/438 (1%)

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M +    P I+ +N +L S  K      A+ L  +++  G  P+ VT  +L+  +   G 
Sbjct: 1   MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           +     ++  +LK+G + ++ ++  +I G    G   EAL   + +V  G      +Y I
Sbjct: 61  ITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAI 120

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKN-VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
           L+ GLCK G    A     +MLRK  V  D++ Y+T++   C+   + +A+ L+ E+ ++
Sbjct: 121 LMNGLCKMGETRAA----MQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAK 176

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
            + P V T++ L+D LC+    + A  L   M+ +G+ P+V+TY  +++G C +  ++ A
Sbjct: 177 GIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKA 236

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
              FN M+++G++P+ + Y   I G  K     EA  L +EM  K   PD++TYN+L+ G
Sbjct: 237 LNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDG 296

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           LCKLG +  + EL+ +M   G   D ITY S++HA  +   L +   L   +  +G+ P 
Sbjct: 297 LCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPN 356

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
           + TYT LI      GRLE A++ F E+  +G    V TYN +INGLC+    D+A  L  
Sbjct: 357 VCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLS 416

Query: 653 DMEEEGILPNKYTYTILI 670
            ME+   +P+  +Y  +I
Sbjct: 417 RMEDNACIPDAVSYETII 434



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 126/422 (29%), Positives = 223/422 (52%), Gaps = 3/422 (0%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           SI  L +L+  Y     +     +  K+L+ G  P+      +IK +  NG + +A   +
Sbjct: 44  SIVTLTILMNCYCHTGGITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFH 103

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             +   G K   V+Y  +++  CK GE + A+++L   +    + + V Y+ +I    + 
Sbjct: 104 DHVVAHGFKLDQVSYAILMNGLCKMGETRAAMQML---RKTWVNADVVMYSTIIDSLCKG 160

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
             +  A  L  +M+  G+  + ++++ ++    +     +A+NL   M+ +GV P + TY
Sbjct: 161 KFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTY 220

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
             ++ G C   +V+ A + F  M+++ V P++  YN ++ G C+   + EA  LF E+  
Sbjct: 221 GAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHW 280

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           + + P VVTYN LIDGLC+ G +  + +L + M + G   D+ITY  +++  CK  +L  
Sbjct: 281 KKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQ 340

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A     E+  +G+QP+   YTT I G  K G   +AY + +E+L +G+   + TYNV+++
Sbjct: 341 AITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMIN 400

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           GLCK G  +EA  LL +M  +  IPD ++Y +II+A  E G+  +   L   M+ +GLS 
Sbjct: 401 GLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGLSK 460

Query: 592 TL 593
            L
Sbjct: 461 RL 462



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/440 (28%), Positives = 212/440 (48%), Gaps = 3/440 (0%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           ML+    P +   N I+  L        A  ++R +   GIKPSIVT   +++ +C  G 
Sbjct: 1   MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           +     +L ++   G  PN +T+  LI G   NG+  +A      ++  G K+   SY  
Sbjct: 61  ITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAI 120

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           ++ G  + G    A+ +  +     V   +  Y+ +I  LCK   V+DA   + EM+ K 
Sbjct: 121 LMNGLCKMGETRAAMQMLRK---TWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKG 177

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
           + P++ +++ L+   C+     +A  L   +  + + P VVTY  ++DG C    +  A 
Sbjct: 178 IFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKAL 237

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
            +   M+ +G+ P+V  Y I++NG CK   +  A   F EM  K + PD   Y   I G 
Sbjct: 238 NIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGL 297

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
            KLG  S +  L +EM + G   D+ITYN L+H LCK   L++A  L++++   G  P+ 
Sbjct: 298 CKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNV 357

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
            TYT++I    + G L     +F  +L +G   T+ TY V+I+    +G  + A    S 
Sbjct: 358 CTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSR 417

Query: 619 MQVKGIRPNVITYNALINGL 638
           M+     P+ ++Y  +I  L
Sbjct: 418 MEDNACIPDAVSYETIIYAL 437



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 205/434 (47%), Gaps = 32/434 (7%)

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           ML++        +N I+    +      A++L  ++   G+ P++ T  IL+   C  G 
Sbjct: 1   MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           ++       ++L+    P+ I++ TL+ G C +G   EA L  D + +       V+Y  
Sbjct: 61  ITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAI 120

Query: 424 LIDGLCRYGDLEVAQQ--------------------------------LKENMINQGILP 451
           L++GLC+ G+   A Q                                L   MI +GI P
Sbjct: 121 LMNGLCKMGETRAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFP 180

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           +V T++I+V+  CK      A      M++KG++P+   Y   + G   +   ++A  + 
Sbjct: 181 NVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIF 240

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
             M+ +G  P++  YN++++GLCK   ++EA  L ++M      PD +TY  +I    ++
Sbjct: 241 NVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKL 300

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
           G +    +L + M   G +  ++TY  L+HA      L+ A     E++ +GI+PNV TY
Sbjct: 301 GKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTY 360

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
             LI+GLC+  R++ AY +F ++  EG     +TY ++IN  C  G + EAL L   M D
Sbjct: 361 TTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMED 420

Query: 692 REIEPDYCTHSALL 705
               PD  ++  ++
Sbjct: 421 NACIPDAVSYETII 434



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 67/144 (46%)

Query: 166 GLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSV 225
            +   V I   + LL    K   ++Q + +  ++   G+ P+V     +I  L  +G   
Sbjct: 315 SIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLE 374

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
            A  +++ +   G   ++ TYN M++  CK+G   EAL LL  M+   C P+ V+Y  +I
Sbjct: 375 DAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETII 434

Query: 286 TGFSRNGELEQARGLIRDMLKLGL 309
              S  GE  +   L+  M+  GL
Sbjct: 435 YALSEKGETVKTNKLLCAMIVRGL 458


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 131/423 (30%), Positives = 220/423 (52%), Gaps = 1/423 (0%)

Query: 204 LLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEAL 263
           ++P     N +       G   + +EVY+ M E G       Y  ++   CK G   EA 
Sbjct: 6   VIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAY 65

Query: 264 ELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGY 323
           +LL  M+ +      + Y+ +I    +   +E+AR LI  M +      A +Y PI+   
Sbjct: 66  KLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGPIVERL 124

Query: 324 SEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
            +   + +AL   EEM TRG+ P    YN ++ GLC+  +V +AR  F +M+++ + P++
Sbjct: 125 CKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNV 184

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
           ++YNTL+ G C++  I  A+ LF E+  +  VPT V+YNTLIDG C+  DL  A+ + + 
Sbjct: 185 VTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDK 244

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           M+    +P+V+TYT +++G  K G +  A E  + M++KG+ P+   Y+  I G  K+  
Sbjct: 245 MVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRR 304

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
             EA++L E+M+ +G  P ++TYN+L++ LC+   LE+A +L R M      P  +TY +
Sbjct: 305 VDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNT 364

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           ++ A      L     L+  M+ KG  P  +TY  L       G++  A     +M++  
Sbjct: 365 LLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTK 424

Query: 624 IRP 626
             P
Sbjct: 425 RNP 427



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 136/415 (32%), Positives = 218/415 (52%), Gaps = 1/415 (0%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P   T+NT+ D F K G +++  E+   M   G +     Y +LI+   + G  ++A  L
Sbjct: 8   PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  M     K  A +Y+ II    +   + EA  L E+M  R   P   TY  ++  LCK
Sbjct: 68  LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMA-RYAPPDALTYGPIVERLCK 126

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
             R+ DA     EM  + + PD   YN +L G C+   + EA LLF+++  + + P VVT
Sbjct: 127 TKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVT 186

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YNTLI+GLC+   +E A +L + M  +G +P  ++Y  +++G CK  +L  A++ F++M+
Sbjct: 187 YNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMV 246

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           R    P+   YTT I G  K G    A  + + M+ KG  P++ TY+ L+ G CK+  ++
Sbjct: 247 RSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVD 306

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA++LL +MV  G  P  +TY  ++++      L     LF  M ++   PT+VTY  L+
Sbjct: 307 EAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLL 366

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
            A     +L+ A   ++EM  KG  P+ ITY+ L  GL R  ++ +A  L   M+
Sbjct: 367 RALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 421



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 127/384 (33%), Positives = 203/384 (52%), Gaps = 6/384 (1%)

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
           M  R V P  AT+N +  G  K GR+   +  +  M+          Y  L+   C+ GN
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
             EA+ L   +R +      + Y+T+I+ LC+   +E A++L E M      PD +TY  
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAP-PDALTYGP 119

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           +V   CK   +  A     EM  +G++PD F Y   ++G  +     EA  L E+M+ + 
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
             P+++TYN L++GLCK   +E A EL ++M G G++P  ++Y ++I    +  DL   +
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 239

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           D+F+ M+R    P +VTYT LI   +  G+++ A      M  KG+ PNV TY+ LI+G 
Sbjct: 240 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 299

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
           C++RR+D+A+ L   M  +GI P   TY IL+N  C A   ++A +L++ M  R   P  
Sbjct: 300 CKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTV 359

Query: 699 CTHSALLL-----KQLDKDYKVHA 717
            T++ LL      KQLD  ++++A
Sbjct: 360 VTYNTLLRALCHHKQLDGAHRLYA 383



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/414 (31%), Positives = 211/414 (50%), Gaps = 1/414 (0%)

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           P   T+N +  GF++ G LEQ + + + M++ G  + A  Y  +I    + G   EA  L
Sbjct: 8   PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
              M  +        Y+ +I  LCK  RV +AR    E + +   PD ++Y  ++   C+
Sbjct: 68  LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARE-LIEKMARYAPPDALTYGPIVERLCK 126

Query: 396 SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
           +  I +A    +E+ +R + P    YN ++ GLC+   +E A+ L E M+ Q I P+V+T
Sbjct: 127 TKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVT 186

Query: 456 YTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML 515
           Y  ++NG CK   +  A E F EM  KG  P   +Y T I G  K  D   A  + ++M+
Sbjct: 187 YNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMV 246

Query: 516 AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLR 575
                P+++TY  L+ GL K G ++ A E+L  MV  G  P+  TY+ +I    ++  + 
Sbjct: 247 RSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVD 306

Query: 576 RGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALI 635
               L   M+ +G++PT+VTY +L+++     +LE AF  F  M  +   P V+TYN L+
Sbjct: 307 EAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLL 366

Query: 636 NGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
             LC  +++D A+ L+ +M  +G  P+  TY  L      AG   EA  L ++M
Sbjct: 367 RALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 127/415 (30%), Positives = 210/415 (50%), Gaps = 3/415 (0%)

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
           A ++N +  G+++ G L +   + + MV  G     + Y ILI  LCK G   +A     
Sbjct: 10  AATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLH 69

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
            M  K      I+Y+T++   C+   + EA  L +++ +R   P  +TY  +++ LC+  
Sbjct: 70  TMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGPIVERLCKTK 128

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
            ++ A    E M  +GI PD   Y  +++G C+   +  AR  F +M+++ + P+   Y 
Sbjct: 129 RIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYN 188

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
           T I G  K      AY L +EM  KG+ P  ++YN L+ G CK   L  A ++  KMV  
Sbjct: 189 TLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRS 248

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
             +P+ +TYT++I    + G ++   ++ + M++KG++P + TY+ LI       R++ A
Sbjct: 249 NCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEA 308

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
                +M  +GI P V+TYN L+N LCR  +++ A+ LF  M +    P   TY  L+  
Sbjct: 309 HKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRA 368

Query: 673 NCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVH-AVEYLESLTL 726
            C+      A RLY EM+ +   PD  T+  L    L +  KVH A E +E + L
Sbjct: 369 LCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAW-GLTRAGKVHEAQELMEKMKL 422



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 204/402 (50%), Gaps = 1/402 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K   +EQ   V+  M+  G          +I  L   G   +A ++   M     K  
Sbjct: 20  FAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTMRLKRFKRK 79

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            + Y+T+++  CK   ++EA EL+ +M  R   P+ +TY  ++    +   ++ A   + 
Sbjct: 80  AIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGPIVERLCKTKRIDDALATVE 138

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M   G+K  A  YN ++ G  ++  + EA  L E+MV + + P + TYN LI GLCK  
Sbjct: 139 EMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAW 198

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R+  A   F EM  K  +P  +SYNTL+ G+C+  ++  A  +FD++   N VP VVTY 
Sbjct: 199 RIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYT 258

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           TLIDGL + G ++ A ++ + M+ +G+ P+V TY+ +++G CK+  +  A +   +M+ +
Sbjct: 259 TLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQ 318

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G+ P    Y   +    +     +A++L   M  +   P ++TYN L+  LC    L+ A
Sbjct: 319 GIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGA 378

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM 584
           + L  +M+  G  PD ITY ++       G +   ++L   M
Sbjct: 379 HRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 147/326 (45%), Gaps = 49/326 (15%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G+K D F++  +L  L +   +  A  + E +V   ++               ++   + 
Sbjct: 144 GIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINP--------------NVVTYNT 189

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+    K   +E    +F +M   G +P   + N +I         V A++V+  M    
Sbjct: 190 LINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSN 249

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
             P++VTY T++D   K G++Q A E+L  M  +G +PN  TY+ LI GF +   +++A 
Sbjct: 250 CVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAH 309

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L+  M                                   VT+G+APT+ TYNIL+  L
Sbjct: 310 KLLEQM-----------------------------------VTQGIAPTVVTYNILLNSL 334

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C+  ++ DA   F  M ++   P +++YNTLL   C    +  A  L+ E+ ++   P  
Sbjct: 335 CRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDA 394

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENM 444
           +TY+TL  GL R G +  AQ+L E M
Sbjct: 395 ITYDTLAWGLTRAGKVHEAQELMEKM 420



 Score = 39.3 bits (90), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 28/123 (22%), Positives = 57/123 (46%), Gaps = 2/123 (1%)

Query: 156 HGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRII 215
           H +L+ ++  G++   ++   ++LL    +   +E    +F  M +    P V   N ++
Sbjct: 309 HKLLEQMVTQGIAP--TVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLL 366

Query: 216 KVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCS 275
           + L  +     A  +Y  M   G  P  +TY+T+     + G++ EA EL+ +M+    +
Sbjct: 367 RALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRN 426

Query: 276 PNG 278
           P G
Sbjct: 427 PFG 429


>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 539

 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 140/462 (30%), Positives = 242/462 (52%), Gaps = 2/462 (0%)

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGR-GCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           +N +L +  K       + L   +Q +    P+ +T+++LI  F++ G++  A  L+ ++
Sbjct: 72  FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNI 131

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           LK+G ++       ++ G   KG ++EA++L  E V RG       Y  +I GLCK G+ 
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKT 191

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            DA   F +M +  V P++I YNT++ G C+ G + EA  L  E+    +   V +YN++
Sbjct: 192 RDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSM 251

Query: 425 IDGLCRYGDLEVAQQLKENMINQG-ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           I G C  G  + A +L + M+ +G + PDV T+ I+++G CK+G +S A      M+++G
Sbjct: 252 IHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRG 311

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
            +PD  +Y   + G    G   EA ++ ++M+ +   P++I+Y  L++G CK+  ++EA 
Sbjct: 312 WKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAM 371

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
            LL +M     +PD +TY  ++    + G      DL   M   G    L+TY VL+  +
Sbjct: 372 VLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDY 431

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
               + + A   F  +   GI PN+ TYN L++GLC+  R+  A  +F  +  +G  PN 
Sbjct: 432 FKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNI 491

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            TY I+I+  C  G   EA  L  +M++    P+Y T   ++
Sbjct: 492 RTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIV 533



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 139/433 (32%), Positives = 222/433 (51%), Gaps = 1/433 (0%)

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           IKPS++T++ ++++F + G+M  A  LL  +   G   +      L+ G    G + +A 
Sbjct: 101 IKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAV 160

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L+ + +  G +     Y  II G  + G   +A+ +  +M    V P L  YN +I GL
Sbjct: 161 SLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGL 220

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV-PT 417
           CK G V +A     EM+   +  D+ SYN++++G+C  G    A  L DE+  R  V P 
Sbjct: 221 CKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPD 280

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           V T+N LIDGLC+ G +  A  +   MI +G  PD+++Y  ++NG C  G++  A++ F+
Sbjct: 281 VYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFD 340

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           +M+ +   P+  +Y T I G  K+    EA  L  EM  K   PD +TYN L+ GL K G
Sbjct: 341 KMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSG 400

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
                 +L+  M   G   D ITY  ++    +     +   LF +++  G+SP + TY 
Sbjct: 401 RSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYN 460

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           +L+      GRL+ A   F  +  KG +PN+ TYN +I+GLC+   +D+A  L   M   
Sbjct: 461 ILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNN 520

Query: 658 GILPNKYTYTILI 670
             LPN  T+  ++
Sbjct: 521 NYLPNYITFDTIV 533



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 132/407 (32%), Positives = 220/407 (54%), Gaps = 36/407 (8%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           +L+ G   DV+    ++K L   G  ++A  +     + G +   V Y T+++  CK G+
Sbjct: 131 ILKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGK 190

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
            ++A+++  +M+     PN + YN +I G  + G +++A GL  +M++ G+++  +SYN 
Sbjct: 191 TRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNS 250

Query: 319 IICGYSEKGLLVEALNLEEEMVTRG-VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
           +I G+   G    A+ L +EMV RG V P + T+NILI GLCK GRVS+A +    M+++
Sbjct: 251 MIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKR 310

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
              PDI+SYN L+ GYC SG++GEA  +FD++  R  +P V++Y TLI+G C+   ++ A
Sbjct: 311 GWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEA 370

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMG------------------------------ 467
             L   M N+ ++PD +TY  +++G  K G                              
Sbjct: 371 MVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDD 430

Query: 468 -----NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
                    A   F  ++  G+ P+   Y   + G  K G    A  + + + AKG  P+
Sbjct: 431 YFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPN 490

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           + TYN+++HGLCK G L+EA  LL KMV + ++P++IT+ +I+ A L
Sbjct: 491 IRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRAIL 537



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 124/404 (30%), Positives = 203/404 (50%), Gaps = 1/404 (0%)

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
           + G +  +    T++   C +G + EA+ LL E   RG   + V Y  +I G  + G+  
Sbjct: 133 KMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTR 192

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
            A  +   M K+ +  +   YN +I G  ++GL+ EA  L  EMV  G+   + +YN +I
Sbjct: 193 DAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMI 252

Query: 356 YGLCKWGRVSDARHRFFEML-RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           +G C  GR   A     EM+ R  V PD+ ++N L+ G C+ G + EA+ +   +  R  
Sbjct: 253 HGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGW 312

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P +V+YN L++G C  G +  A+Q+ + M+ +  LP+VI+Y  ++NG CK+  +  A  
Sbjct: 313 KPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMV 372

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
              EM  K L PD   Y   + G  K G +   + L E M A G P DLITYNVL+    
Sbjct: 373 LLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYF 432

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           K    ++A  L + ++  G  P+  TY  ++    + G L+  +++F  +  KG  P + 
Sbjct: 433 KHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIR 492

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           TY ++IH     G L+ A     +M      PN IT++ ++  +
Sbjct: 493 TYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRAI 536


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 135/423 (31%), Positives = 217/423 (51%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PSIV +  +L    K       + L  +MQ  G SP   T N+++    R+ +  +A   
Sbjct: 80  PSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCF 139

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  M+KLG +    ++  ++ G+     + +AL L +++V  G  P + TY  LI+ LCK
Sbjct: 140 LGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCK 199

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
              ++ A   F +M    + P++++YN+L+ G C  G   +A  L  ++  R + P V+T
Sbjct: 200 NRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVIT 259

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           +  LID   + G +  A++L + MI   + PDV TYT ++NG C  G L  AR+ F  M 
Sbjct: 260 FTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLME 319

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
             G  P+   YTT I G  K     +  ++  EM  KG   + ITY VL+ G C +G  +
Sbjct: 320 SNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPD 379

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
            A E+  +M      PD  TY  ++      G + +   +F  M ++ +   +VTYT++I
Sbjct: 380 VAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIII 439

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                 G++E AF  F  +  KG++PNVITY  +I+G CR   I +A  LF  M+E+G L
Sbjct: 440 QGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFL 499

Query: 661 PNK 663
           PN+
Sbjct: 500 PNE 502



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 120/374 (32%), Positives = 210/374 (56%)

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
            ++L E+M   G++P L T NI++  +C+  +   A     +M++    PD++++ +LL+
Sbjct: 101 VISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLH 160

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
           G+C    I +A  LFD++      P VVTY TLI  LC+   L  A ++   M + GI P
Sbjct: 161 GFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRP 220

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           +V+TY  +V+G C++G  S A     +M+++G+QP+   +T  I   +K+G   EA  L 
Sbjct: 221 NVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELY 280

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
           + M+     PD+ TY  L++GLC  G L+EA ++   M  +G+ P+ +TYT++IH   + 
Sbjct: 281 KVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKS 340

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
             +  G  +F  M +KGL    +TYTVLI  +   GR ++A   F++M  +   P++ TY
Sbjct: 341 KRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTY 400

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           N L++GLC    +++A  +F  M +  +  N  TYTI+I   C  G  ++A  L+  +  
Sbjct: 401 NVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFS 460

Query: 692 REIEPDYCTHSALL 705
           + ++P+  T++ ++
Sbjct: 461 KGMKPNVITYTTMI 474



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 208/420 (49%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           SI     LL +  K    +  + +F +M   G+ P +  CN ++  +  +    +A    
Sbjct: 81  SIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFL 140

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M + G +P +VT+ ++L  FC    +++AL L  ++ G G  PN VTY  LI    +N
Sbjct: 141 GKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKN 200

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
             L  A  +   M   G++ +  +YN ++ G  E G   +A  L  +M+ RG+ P + T+
Sbjct: 201 RHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITF 260

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
             LI    K G++ +A+  +  M++ +V PD+ +Y  L+ G C  G + EA  +F  + S
Sbjct: 261 TALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMES 320

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
               P  VTY TLI G C+   +E   ++   M  +G++ + ITYT+++ G C +G   +
Sbjct: 321 NGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDV 380

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A+E FN+M  +   PD   Y   + G    G   +A  + + M  +    +++TY +++ 
Sbjct: 381 AQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQ 440

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           G+CK+G +E+A +L   +   G  P+ ITYT++I      G +     LF  M   G  P
Sbjct: 441 GMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLP 500



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 112/334 (33%), Positives = 184/334 (55%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +E  L +F++++  G  P+V     +I  L  N     A E++  MG+ GI+P++VTYN+
Sbjct: 168 IEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNS 227

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++   C+ G   +A  LL +M  RG  PN +T+  LI  F + G++ +A+ L + M+++ 
Sbjct: 228 LVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMS 287

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           +     +Y  +I G    G L EA  +   M + G  P   TY  LI+G CK  RV D  
Sbjct: 288 VYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGT 347

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F+EM +K ++ + I+Y  L+ GYC  G    A  +F+++ SR   P + TYN L+DGL
Sbjct: 348 KIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGL 407

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C  G +E A  + + M  + +  +++TYTI++ G CK+G +  A + F  +  KG++P+ 
Sbjct: 408 CYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNV 467

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
             YTT I+G  + G   EA  L ++M   GF P+
Sbjct: 468 ITYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/375 (30%), Positives = 189/375 (50%)

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
           EAL+L   MV     P++  +  L+  + K  R       F +M    + P + + N ++
Sbjct: 65  EALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVM 124

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
              CRS     A     ++      P +VT+ +L+ G C +  +E A  L + ++  G  
Sbjct: 125 NCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFR 184

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
           P+V+TYT +++  CK  +L+ A E FN+M   G++P+   Y + ++G  ++G  S+A  L
Sbjct: 185 PNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWL 244

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
             +M+ +G  P++IT+  L+    K+G + EA EL + M+     PD  TYT++I+    
Sbjct: 245 LRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCT 304

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
            G L   R +F  M   G  P  VTYT LIH      R+E     F EM  KG+  N IT
Sbjct: 305 YGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTIT 364

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           Y  LI G C + R D A  +F  M      P+  TY +L++  C  G  ++AL ++K M 
Sbjct: 365 YTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMR 424

Query: 691 DREIEPDYCTHSALL 705
            RE++ +  T++ ++
Sbjct: 425 KREMDINIVTYTIII 439



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 191/385 (49%), Gaps = 22/385 (5%)

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRV-----------------SDARHRFFEMLRKNVI 380
           ++   G +PTL+     + G C W R                  ++A   F  M+    +
Sbjct: 25  QISNHGASPTLS-----LCGFCFWIRAFSNYRKILRNGLHNLQFNEALDLFTRMVHSRPL 79

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           P I+ +  LL    +         LF++++   + P + T N +++ +CR      A   
Sbjct: 80  PSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCF 139

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
              M+  G  PD++T+T +++G C    +  A   F++++  G +P+   YTT I    K
Sbjct: 140 LGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCK 199

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
               + A  +  +M   G  P+++TYN LV GLC++G   +A  LLR M+  G  P+ IT
Sbjct: 200 NRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVIT 259

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           +T++I A +++G +   ++L+  M++  + P + TYT LI+     GRL+ A   F  M+
Sbjct: 260 FTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLME 319

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
             G  PN +TY  LI+G C+ +R++    +F +M ++G++ N  TYT+LI   C  G   
Sbjct: 320 SNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPD 379

Query: 681 EALRLYKEMLDREIEPDYCTHSALL 705
            A  ++ +M  R   PD  T++ LL
Sbjct: 380 VAQEVFNQMGSRRAPPDIRTYNVLL 404



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 76/164 (46%)

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           Y  I+   L         DLF  M+     P++V +T L+   A   R ++    F +MQ
Sbjct: 50  YRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQ 109

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
           + GI P + T N ++N +CR  +  +A      M + G  P+  T+T L++  C+    +
Sbjct: 110 ILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIE 169

Query: 681 EALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           +AL L+ +++     P+  T++ L+       +  HAVE    +
Sbjct: 170 DALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQM 213


>gi|357146655|ref|XP_003574066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Brachypodium distachyon]
          Length = 795

 Score =  239 bits (609), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 167/571 (29%), Positives = 280/571 (49%), Gaps = 6/571 (1%)

Query: 157 GILDVLIGGGLSSCVSIKIL-DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRII 215
            IL  ++  G   C    I+ D L   Y +  M+   L V +KM    +   V   + ++
Sbjct: 118 AILCDILRNGFRECDPSSIMWDALANSYARAQMIHDALYVLSKMNSLNMQISVSTYDSLL 177

Query: 216 KVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM-QGRGC 274
             LR    +  A E++  M  +GI  S  +++ ++D  CK+ ++ EAL  L E  +G   
Sbjct: 178 YGLR---MTDMALELFEEMEAYGISKSEYSHSIIIDGLCKQDKVGEALSFLQEARKGERF 234

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
            P G+++NVL++     G ++ A+  +  MLK GL    ++Y+ +I G  + G L EA++
Sbjct: 235 KPLGMSFNVLMSALCNWGFIQPAKSFLCLMLKYGLNPDRYTYSTLIHGLCKIGFLDEAVD 294

Query: 335 LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
           L E +   G+     TYN LI G    G   +       M  + + PDI++Y  L+ G+C
Sbjct: 295 LFERVTEEGMKLETVTYNSLINGYRLLGLTREVPKIIQFMRYQGIEPDIVTYTILIAGHC 354

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
            SG++ E   + +++  + L   +VTY+ L++ L + G +  A+ L   + + G+  D+I
Sbjct: 355 ESGDVEEGMKIRNDILDQGLQLNIVTYSVLLNALFKKGLVHEAENLLGEIHSIGLDMDII 414

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEM-LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
            Y+I+++G CK+G +  A E  + M   + + P    + + + G  K G   EA    E 
Sbjct: 415 AYSILIHGYCKLGEIERALEVCDVMCCSQKVVPTSLNHLSILVGLCKKGLLVEARWYLEN 474

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           +  K  P D++ YNV++ G  K+G +  A  L  ++V  G  P  +T  SI++   + GD
Sbjct: 475 VAVKYQPGDVVLYNVVIDGYAKIGDISNAVGLYDQIVIAGMFPTIVTCNSILYGYCKCGD 534

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
           L+     F  +    L PT+VTYT L+ A +  G++        EM  KGI+PN ITY+ 
Sbjct: 535 LQAAESYFRAIQISSLLPTMVTYTTLMDALSEAGKVNTMLSILYEMVEKGIKPNAITYSV 594

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
           +I GLC+  R   A     +M  EG+  +  TY  LI   C   + Q A  ++  M+   
Sbjct: 595 VIKGLCKELRFHDAIHFLDNMHGEGVNADPVTYNTLIQGFCEVQDIQMAFHIHDRMVYCG 654

Query: 694 IEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           I P   T++ L+     K   + A   LESL
Sbjct: 655 IVPTPVTYNFLINVLCLKGQVIQAEYLLESL 685



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 149/529 (28%), Positives = 265/529 (50%), Gaps = 2/529 (0%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           ML+ GL PD    + +I  L   GF  +A +++  + E G+K   VTYN++++ +   G 
Sbjct: 264 MLKYGLNPDRYTYSTLIHGLCKIGFLDEAVDLFERVTEEGMKLETVTYNSLINGYRLLGL 323

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
            +E  +++  M+ +G  P+ VTY +LI G   +G++E+   +  D+L  GL+++  +Y+ 
Sbjct: 324 TREVPKIIQFMRYQGIEPDIVTYTILIAGHCESGDVEEGMKIRNDILDQGLQLNIVTYSV 383

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML-RK 377
           ++    +KGL+ EA NL  E+ + G+   +  Y+ILI+G CK G +  A      M   +
Sbjct: 384 LLNALFKKGLVHEAENLLGEIHSIGLDMDIIAYSILIHGYCKLGEIERALEVCDVMCCSQ 443

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
            V+P  +++ ++L G C+ G + EA    + +  +     VV YN +IDG  + GD+  A
Sbjct: 444 KVVPTSLNHLSILVGLCKKGLLVEARWYLENVAVKYQPGDVVLYNVVIDGYAKIGDISNA 503

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
             L + ++  G+ P ++T   ++ G CK G+L  A  +F  +    L P    YTT +  
Sbjct: 504 VGLYDQIVIAGMFPTIVTCNSILYGYCKCGDLQAAESYFRAIQISSLLPTMVTYTTLMDA 563

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
             + G  +    +  EM+ KG  P+ ITY+V++ GLCK     +A   L  M G+G   D
Sbjct: 564 LSEAGKVNTMLSILYEMVEKGIKPNAITYSVVIKGLCKELRFHDAIHFLDNMHGEGVNAD 623

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
            +TY ++I    E+ D++    + + M+  G+ PT VTY  LI+    +G++  A     
Sbjct: 624 PVTYNTLIQGFCEVQDIQMAFHIHDRMVYCGIVPTPVTYNFLINVLCLKGQVIQAEYLLE 683

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
            ++ +GI      Y  LI   C      +A  LF  + ++G       ++  IN  C   
Sbjct: 684 SLRERGIELRKFAYTTLIKAECAKGMPYEAISLFGKLLDDGFETTVKDFSAAINRLCKRK 743

Query: 678 NWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
             +EA+     ML   + PD   +  +L++ L K  ++  +  L +L +
Sbjct: 744 FAKEAVMFIPFMLSAGVFPDTQVYY-VLVRALQKRKELFYLPLLHALAV 791



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 128/487 (26%), Positives = 246/487 (50%), Gaps = 1/487 (0%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   +++ + +F ++   G+  +    N +I   R  G + +  ++ + M   GI+P IV
Sbjct: 285 KIGFLDEAVDLFERVTEEGMKLETVTYNSLINGYRLLGLTREVPKIIQFMRYQGIEPDIV 344

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY  ++   C+ G+++E +++  ++  +G   N VTY+VL+    + G + +A  L+ ++
Sbjct: 345 TYTILIAGHCESGDVEEGMKIRNDILDQGLQLNIVTYSVLLNALFKKGLVHEAENLLGEI 404

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV-TRGVAPTLATYNILIYGLCKWGR 363
             +GL +   +Y+ +I GY + G +  AL + + M  ++ V PT   +  ++ GLCK G 
Sbjct: 405 HSIGLDMDIIAYSILIHGYCKLGEIERALEVCDVMCCSQKVVPTSLNHLSILVGLCKKGL 464

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           + +AR     +  K    D++ YN ++ GY + G+I  A  L+D++    + PT+VT N+
Sbjct: 465 LVEARWYLENVAVKYQPGDVVLYNVVIDGYAKIGDISNAVGLYDQIVIAGMFPTIVTCNS 524

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           ++ G C+ GDL+ A+     +    +LP ++TYT +++   + G ++       EM+ KG
Sbjct: 525 ILYGYCKCGDLQAAESYFRAIQISSLLPTMVTYTTLMDALSEAGKVNTMLSILYEMVEKG 584

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           ++P+   Y+  I G  K     +A    + M  +G   D +TYN L+ G C++  ++ A 
Sbjct: 585 IKPNAITYSVVIKGLCKELRFHDAIHFLDNMHGEGVNADPVTYNTLIQGFCEVQDIQMAF 644

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
            +  +MV  G +P  +TY  +I+     G + +   L  ++  +G+      YT LI A 
Sbjct: 645 HIHDRMVYCGIVPTPVTYNFLINVLCLKGQVIQAEYLLESLRERGIELRKFAYTTLIKAE 704

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
            A+G    A   F ++   G    V  ++A IN LC+ +   +A      M   G+ P+ 
Sbjct: 705 CAKGMPYEAISLFGKLLDDGFETTVKDFSAAINRLCKRKFAKEAVMFIPFMLSAGVFPDT 764

Query: 664 YTYTILI 670
             Y +L+
Sbjct: 765 QVYYVLV 771



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 86/357 (24%), Positives = 139/357 (38%), Gaps = 60/357 (16%)

Query: 129 TILEILIESGLLRSAYWVVETVVC-----------------------VNMHGILDVLIGG 165
           +IL  L + GLL  A W +E V                          N  G+ D ++  
Sbjct: 454 SILVGLCKKGLLVEARWYLENVAVKYQPGDVVLYNVVIDGYAKIGDISNAVGLYDQIVIA 513

Query: 166 GLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSV 225
           G+    +I   + +L  Y K   ++     F  +  + LLP +     ++  L + G   
Sbjct: 514 GMFP--TIVTCNSILYGYCKCGDLQAAESYFRAIQISSLLPTMVTYTTLMDALSEAGKVN 571

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
               +   M E GIKP+ +TY+ ++   CKE    +A+  L  M G G + + VTYN LI
Sbjct: 572 TMLSILYEMVEKGIKPNAITYSVVIKGLCKELRFHDAIHFLDNMHGEGVNADPVTYNTLI 631

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            GF    +++                                    A ++ + MV  G+ 
Sbjct: 632 QGFCEVQDIQM-----------------------------------AFHIHDRMVYCGIV 656

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           PT  TYN LI  LC  G+V  A +    +  + +     +Y TL+   C  G   EA  L
Sbjct: 657 PTPVTYNFLINVLCLKGQVIQAEYLLESLRERGIELRKFAYTTLIKAECAKGMPYEAISL 716

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
           F +L       TV  ++  I+ LC+    + A      M++ G+ PD   Y ++V  
Sbjct: 717 FGKLLDDGFETTVKDFSAAINRLCKRKFAKEAVMFIPFMLSAGVFPDTQVYYVLVRA 773



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 1/117 (0%)

Query: 610 ELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE-EGILPNKYTYTI 668
           ++A   F EM+  GI  +  +++ +I+GLC+  ++ +A     +  + E   P   ++ +
Sbjct: 184 DMALELFEEMEAYGISKSEYSHSIIIDGLCKQDKVGEALSFLQEARKGERFKPLGMSFNV 243

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
           L++  CN G  Q A      ML   + PD  T+S L+       +   AV+  E +T
Sbjct: 244 LMSALCNWGFIQPAKSFLCLMLKYGLNPDRYTYSTLIHGLCKIGFLDEAVDLFERVT 300


>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
 gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
          Length = 676

 Score =  239 bits (609), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 147/480 (30%), Positives = 236/480 (49%), Gaps = 20/480 (4%)

Query: 259 MQEALELLWEMQGRGCSPNGVTYN-VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
           ++EA ++L E++  G      T N VL  G  +      AR     M   G++  A S+ 
Sbjct: 129 LREATDMLLELRSHGLPLVVETANWVLRVGLRQRHHFAHARQAFDGM---GVRPDARSFR 185

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            ++ G  ++G   EA  L   M   G +   AT  +++   C+ GR  D    F  M+  
Sbjct: 186 ALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEM 245

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
              P++++Y   + G C+ G + +AF + +E+  + L P V T+ +LIDGLC+ G  E A
Sbjct: 246 GNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERA 305

Query: 438 QQLKENMI-NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
            +L   ++ +    P+V TYT+M+ G CK G L+ A      M+ +GL P+   YTT I 
Sbjct: 306 FRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLID 365

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
           G  + G    A+ L  +M  +GF P++ TYN ++ G CK G +++A ++LR     G  P
Sbjct: 366 GHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCP 425

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
           D +TYT +I    + G +    DLFN M      P + TYT +I  +  + ++E +   F
Sbjct: 426 DKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLF 485

Query: 617 SEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNA 676
            +    G+ P   TY ++I G CR+ +   A  +F  M + G LP+  TY  LI+  C  
Sbjct: 486 DKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKE 545

Query: 677 GNWQEALRLYKEMLDREIEP----------DYC-----THSALLLKQLDKDYKVHAVEYL 721
              +EA  L++ MLD+ + P          +YC     T +   L  LDK  + HA + L
Sbjct: 546 SRLEEARALFETMLDKHMVPCDVTCVTLAYEYCRRDKTTIAVSFLDGLDKRQQAHAADAL 605



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 141/506 (27%), Positives = 235/506 (46%), Gaps = 8/506 (1%)

Query: 202 NGLLPDVKNCNRIIKV-LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQ 260
           +GL   V+  N +++V LR       AR+ +  MG   ++P   ++  ++   C+EG  +
Sbjct: 142 HGLPLVVETANWVLRVGLRQRHHFAHARQAFDGMG---VRPDARSFRALVLGCCQEGRFE 198

Query: 261 EALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII 320
           EA  LL  M   G S +  T  V++  F R G      GL   M+++G   +  +Y   +
Sbjct: 199 EADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWV 258

Query: 321 CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
            G  ++G + +A ++ EEMV +G+ P + T+  LI GLCK G    A   F ++++ +  
Sbjct: 259 DGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSY 318

Query: 381 -PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
            P++ +Y  ++ GYC+ G +  A +L   +  + L P   TY TLIDG CR G  + A +
Sbjct: 319 KPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFE 378

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           L   M  +G LP++ TY  ++ G CK G +  A +       +GL PD+  YT  I    
Sbjct: 379 LMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHC 438

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           K G  + A  L  +M      PD+ TY  ++   C+   +E++ +L  K +  G +P   
Sbjct: 439 KQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQ 498

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
           TYTS+I     +G       +F  M++ G  P  +TY  LI       RLE A   F  M
Sbjct: 499 TYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEARALFETM 558

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
             K + P  +T   L    CR  +   A      +++       +    L+ +     N 
Sbjct: 559 LDKHMVPCDVTCVTLAYEYCRRDKTTIAVSFLDGLDKR---QQAHAADALVRKLSAVDNL 615

Query: 680 QEALRLYKEMLDREIEPDYCTHSALL 705
             A    K +LD+    D+ T+++ +
Sbjct: 616 DAASLFLKNVLDKHYAVDHATYTSFI 641



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 134/461 (29%), Positives = 216/461 (46%), Gaps = 8/461 (1%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+L   ++   E+   +   M R G   D   C  +++     G       ++  M E G
Sbjct: 187 LVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEMG 246

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
             P++V Y   +D  CK G +++A  +L EM G+G  PN  T+  LI G  + G  E+A 
Sbjct: 247 NPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAF 306

Query: 299 GLIRDMLK-LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
            L   ++K    K + H+Y  +I GY ++G L  A  L   MV +G+AP   TY  LI G
Sbjct: 307 RLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDG 366

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
            C+ G    A     +M  +  +P+I +YN ++ G+C+ G I +A+ +     S+ L P 
Sbjct: 367 HCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPD 426

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
            VTY  LI   C+ G +  A  L   M      PD+ TYT ++   C+   +  +++ F+
Sbjct: 427 KVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFD 486

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           + L  GL P +  YT+ IAG  ++G ++ A ++ E M+  G  PD ITY  L+ GLCK  
Sbjct: 487 KCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKES 546

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            LEEA  L   M+    +P  +T  ++ +        RR +         GL      + 
Sbjct: 547 RLEEARALFETMLDKHMVPCDVTCVTLAYEY-----CRRDKTTIAVSFLDGLDKRQQAHA 601

Query: 598 --VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
              L+   +A   L+ A ++   +  K    +  TY + IN
Sbjct: 602 ADALVRKLSAVDNLDAASLFLKNVLDKHYAVDHATYTSFIN 642



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 120/387 (31%), Positives = 194/387 (50%), Gaps = 4/387 (1%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMGEFGIKPSI 243
           K+  V+Q   V  +M+  GL P+V     +I  L   G++ +A  ++ +++     KP++
Sbjct: 263 KRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNV 322

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
            TY  M+  +CKEG++  A  LL  M  +G +PN  TY  LI G  R G  ++A  L+  
Sbjct: 323 HTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNK 382

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M   G   + ++YN II G+ +KG + +A  +     ++G+ P   TY +LI   CK G 
Sbjct: 383 MKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGH 442

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           ++ A   F +M   +  PDI +Y T++  YC+   + ++  LFD+  S  LVPT  TY +
Sbjct: 443 ITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTS 502

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           +I G CR G    A ++ E M+  G LPD ITY  +++G CK   L  AR  F  ML K 
Sbjct: 503 MIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKH 562

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           + P      T      +   T+ A    + +  +         + LV  L  + +L+ A+
Sbjct: 563 MVPCDVTCVTLAYEYCRRDKTTIAVSFLDGLDKR---QQAHAADALVRKLSAVDNLDAAS 619

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLE 570
             L+ ++   +  DH TYTS I++  E
Sbjct: 620 LFLKNVLDKHYAVDHATYTSFINSCYE 646



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 65/128 (50%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +L+  + K+  +   L +FN+M  N   PD+     II +        ++++++      
Sbjct: 432 MLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSI 491

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G+ P+  TY +M+  +C+ G+   AL++   M   GC P+ +TY  LI+G  +   LE+A
Sbjct: 492 GLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEA 551

Query: 298 RGLIRDML 305
           R L   ML
Sbjct: 552 RALFETML 559


>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 831

 Score =  239 bits (609), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 144/504 (28%), Positives = 247/504 (49%), Gaps = 5/504 (0%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P  ++   ++      G    AR  +  M   GI+P++ +Y  ++ ++    +++ A+  
Sbjct: 190 PKQRDHTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIAC 249

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           + EM+  G SPN  TY+V+I+G+ R G++E A    +  L      +   YN II  Y +
Sbjct: 250 VEEMEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCK 309

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK----NVIP 381
            G +  A  +   M  +G+  TL  YN+L+ G     R  D     F  L+      + P
Sbjct: 310 AGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHC-RAVDKCLNVFRRLKARTETGLSP 368

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
            ++SY  L+  Y + G + +A  + +E+  + +     TY+ +IDG  + GD   A  + 
Sbjct: 369 TVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVF 428

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
           E+M N GI PD ITY I++N  CK G ++ A E    M      P    YT  I G +K+
Sbjct: 429 EDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKI 488

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
           GD   A+    +M   GF P   TYNV++HGL + G ++ A  ++ +MV  G  P+  +Y
Sbjct: 489 GDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSY 548

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
           T++I     +GD+      FN +   GL P ++ Y  L+ A    GR++      +EM  
Sbjct: 549 TTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMAA 608

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
            G+  N   YN L++G  +   + +A  +   M  EG+ P+ ++YT  IN  C AG+  +
Sbjct: 609 AGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFINACCKAGDMLK 668

Query: 682 ALRLYKEMLDREIEPDYCTHSALL 705
           A    ++M  + ++P+   ++ L+
Sbjct: 669 ATETIEQMKQQGVQPNLQAYTTLI 692



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 133/487 (27%), Positives = 229/487 (47%), Gaps = 38/487 (7%)

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           P    + +L+  + + G+   AR     M   G++ + HSY  +I  Y+    L  A+  
Sbjct: 190 PKQRDHTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIAC 249

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
            EEM   GV+P  ATY+++I G  + G V  A   F   L +N   + + YN +++ YC+
Sbjct: 250 VEEMEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCK 309

Query: 396 SGNI--GEAFL---------------------------------LFDELRSRN---LVPT 417
           +GN+   EA +                                 +F  L++R    L PT
Sbjct: 310 AGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPT 369

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           VV+Y  LI+   + G ++ A Q+   M +QGI  +  TY+++++G  ++G+ + A   F 
Sbjct: 370 VVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFE 429

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           +M   G++PD   Y   +    K G  + A  L   M +   PP L TY +++ G  K+G
Sbjct: 430 DMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKIG 489

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            L  A E +R M   GF P   TY  I+H   + G + R   + + M+  G+ P   +YT
Sbjct: 490 DLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSYT 549

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
            LI  +A  G + LAF YF+ ++  G++P+VI Y +L+   C+  R+     +  +M   
Sbjct: 550 TLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMAAA 609

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHA 717
           G+  N Y Y IL++     G+  EA  + ++M    + PD  ++++ +         + A
Sbjct: 610 GVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFINACCKAGDMLKA 669

Query: 718 VEYLESL 724
            E +E +
Sbjct: 670 TETIEQM 676



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 223/430 (51%), Gaps = 3/430 (0%)

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
           N II      G   +A  +   M E G++ ++  YN ++D +     + + L +   ++ 
Sbjct: 301 NNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKA 360

Query: 272 R---GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
           R   G SP  V+Y  LI  +S+ G++++A  +  +M   G+K +  +Y+ II GY + G 
Sbjct: 361 RTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGD 420

Query: 329 LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNT 388
              A ++ E+M   G+ P   TYNIL+   CK G+++ A      M   +  P + +Y  
Sbjct: 421 TANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTI 480

Query: 389 LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
           ++ G+ + G++  AF    +++     P+  TYN ++ GL + G ++ A  + + M+  G
Sbjct: 481 IIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAG 540

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
           + P+  +YT ++ G   +G++ +A ++FN +   GL+PD  AY + +    K G      
Sbjct: 541 VHPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTL 600

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
            +  EM A G P +   YN+L+ G  + G + EA+++++KM  +G  PD  +YTS I+A 
Sbjct: 601 AITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFINAC 660

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
            + GD+ +  +    M ++G+ P L  YT LIH  A+    E A + + EM+  G+ P+ 
Sbjct: 661 CKAGDMLKATETIEQMKQQGVQPNLQAYTTLIHGWASASYPEKALICYDEMKSAGMIPDK 720

Query: 629 ITYNALINGL 638
             Y+ ++  L
Sbjct: 721 PLYHCIMTSL 730



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 128/466 (27%), Positives = 232/466 (49%), Gaps = 9/466 (1%)

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           V YN ++ ++CK G M+ A  ++  M+ +G       YN+L+ G+     +++   + R 
Sbjct: 298 VIYNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRR 357

Query: 304 M---LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +    + GL  +  SY  +I  YS+ G + +AL +  EM  +G+     TY+++I G  +
Sbjct: 358 LKARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQ 417

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G  ++A   F +M    + PD I+YN L+  +C++G +  A  L   + S +  PT+ T
Sbjct: 418 LGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRT 477

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y  +IDG  + GDL +A +   +M   G  P   TY ++++G  + G +  A    +EM+
Sbjct: 478 YTIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMV 537

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
             G+ P+  +YTT I G   +GD   A++    +   G  PD+I Y  L+   CK G ++
Sbjct: 538 VAGVHPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQ 597

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
               +  +M   G   ++  Y  ++    + GD+    D+   M  +GL+P + +YT  I
Sbjct: 598 STLAITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFI 657

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
           +A    G +  A     +M+ +G++PN+  Y  LI+G       ++A   + +M+  G++
Sbjct: 658 NACCKAGDMLKATETIEQMKQQGVQPNLQAYTTLIHGWASASYPEKALICYDEMKSAGMI 717

Query: 661 PNKYTY----TILINENCNAGN--WQEALRLYKEMLDREIEPDYCT 700
           P+K  Y    T L++    A    +   LR+  EM+D+ I  D+ T
Sbjct: 718 PDKPLYHCIMTSLLSRAAVARETVFDGVLRVTSEMVDQGICVDFAT 763



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 134/436 (30%), Positives = 215/436 (49%), Gaps = 12/436 (2%)

Query: 152 CVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNC 211
           C+N+   L      GLS  V       L+ +Y+K   +++ L + N+M   G+  + K  
Sbjct: 351 CLNVFRRLKARTETGLSPTVVS--YGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTY 408

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
           + II      G +  A  V+  M   GIKP  +TYN ++++FCK G+M  ALELL  M+ 
Sbjct: 409 SMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMES 468

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
             C P   TY ++I GF + G+L  A   +RDM   G + SA +YN I+ G ++ G +  
Sbjct: 469 GDCPPTLRTYTIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDR 528

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
           A ++ +EMV  GV P   +Y  LI G    G +  A   F  +    + PD+I+Y +LL 
Sbjct: 529 AASIIDEMVVAGVHPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLK 588

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
             C++G +     +  E+ +  +      YN L+DG  + GD+  A  + + M ++G+ P
Sbjct: 589 ACCKAGRMQSTLAITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTP 648

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           D+ +YT  +N  CK G++  A E   +M ++G+QP+  AYTT I G        +A    
Sbjct: 649 DIHSYTSFINACCKAGDMLKATETIEQMKQQGVQPNLQAYTTLIHGWASASYPEKALICY 708

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEA---NELLR---KMVGDGFIPDHITYTS-- 563
           +EM + G  PD   Y+ ++  L    ++      + +LR   +MV  G   D  T     
Sbjct: 709 DEMKSAGMIPDKPLYHCIMTSLLSRAAVARETVFDGVLRVTSEMVDQGICVDFATAKHWQ 768

Query: 564 --IIHASLEMGDLRRG 577
             +I A  + GDL R 
Sbjct: 769 RFLIKAERQSGDLTRA 784



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 113/422 (26%), Positives = 203/422 (48%), Gaps = 14/422 (3%)

Query: 180 LLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS-VKAREVYRMMGEFG 238
           ++   ++  +E  L ++N ML +G +    +C  + K L  N F  +KAR       E G
Sbjct: 319 IMTAMEEQGLEATLGLYN-MLMDGYV----HCRAVDKCL--NVFRRLKART------ETG 365

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           + P++V+Y  +++ + K G+M +AL++  EM+ +G   N  TY+++I G+ + G+   A 
Sbjct: 366 LSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAF 425

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            +  DM   G+K    +YN ++  + + G +  AL L   M +    PTL TY I+I G 
Sbjct: 426 SVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGF 485

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
            K G +  A     +M      P   +YN +++G  ++G +  A  + DE+    + P  
Sbjct: 486 MKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNE 545

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
            +Y TLI+G    GD+ +A +    +   G+ PDVI Y  ++   CK G +        E
Sbjct: 546 RSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITAE 605

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M   G+  + + Y   + G  + GD  EA  + ++M  +G  PD+ +Y   ++  CK G 
Sbjct: 606 MAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFINACCKAGD 665

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           + +A E + +M   G  P+   YT++IH         +    ++ M   G+ P    Y  
Sbjct: 666 MLKATETIEQMKQQGVQPNLQAYTTLIHGWASASYPEKALICYDEMKSAGMIPDKPLYHC 725

Query: 599 LI 600
           ++
Sbjct: 726 IM 727


>gi|224076898|ref|XP_002305039.1| predicted protein [Populus trichocarpa]
 gi|222848003|gb|EEE85550.1| predicted protein [Populus trichocarpa]
          Length = 800

 Score =  239 bits (609), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 167/616 (27%), Positives = 278/616 (45%), Gaps = 89/616 (14%)

Query: 173 IKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR 232
           I++ D L+  Y    M+++ +    ++ R G LP +   N ++  L  NG    A  +Y+
Sbjct: 164 IQVYDALVKSYVTAGMLDEAINALFQIKRRGFLPHIFTFNYLMNKLIANGKVDAALAIYK 223

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYN---------- 282
            +   G+ P+  TY+ ++ +FC++G + EA  +  EM+  G  PN   Y           
Sbjct: 224 QLKSLGLNPNDYTYSIIIKAFCRKGSLVEASNVFQEMELCGVIPNAYAYTTYIEGLCANQ 283

Query: 283 -------------------------VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
                                     +I GF    ++++A  ++ DM K  L   A  Y+
Sbjct: 284 RSDFGYQVLQAWKEGNIPIDVYAYVAVIRGFCNEMKMDRAEVVLGDMEKQELISDARCYS 343

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLA---------------------------- 349
            +I GY + G L +AL L  +M ++G+                                 
Sbjct: 344 ELIRGYCKAGDLSKALALHNDMESKGIKTNCVIVSTILQYFCEKGMHSQVVEEFKRFKDL 403

Query: 350 -------TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
                  +YNI++  LCK  +V  A     EM  K +  DI+ Y TL+ GYC  G + +A
Sbjct: 404 RIFLDEVSYNIVVDALCKLEKVDQAVALLDEMKGKQMDMDIMHYTTLINGYCHVGKLVDA 463

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
           F +F+E+  + L P VVT+N L+    R G    A +L E M +Q + P+ IT+ +M+ G
Sbjct: 464 FRVFEEMEGKGLEPDVVTFNILLAAFSRRGLANEALKLYEYMKSQDLKPNAITHNVMIEG 523

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            C  G ++ A  FF  M  K +      Y   I G  +   T +A  L  E+  +G   D
Sbjct: 524 LCIGGKVTEAEAFFCNMEDKSIDN----YGAMITGYCEAKHTEKASELFFELSERGLLMD 579

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
                 L+  LC+ G  + A  LL+ M+     P    Y  +I A    GD+R    +F+
Sbjct: 580 RGYIYKLLEKLCEEGEKDRALWLLKTMLDLNMEPSKDMYGKVITACYRAGDMRNAEAVFD 639

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
            + + GL+P + TYT +I+    + RL  A   F +M+ +GI+P+++T+  L++G   L+
Sbjct: 640 ILRKSGLTPDIFTYTTMINVCCRQNRLSEARNLFQDMKHRGIKPDLVTFTVLLDG--HLK 697

Query: 643 RIDQ-------------AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           R+               A  ++ +M+   I P+   YT LI+ +C     ++A+ LY EM
Sbjct: 698 RVHSEAFARKRKEVNLAASNIWKEMQNTEIRPDVICYTALIDGHCKVDRLEDAIGLYDEM 757

Query: 690 LDREIEPDYCTHSALL 705
           + R +EPD  T +ALL
Sbjct: 758 MYRGVEPDRATCTALL 773



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 121/439 (27%), Positives = 204/439 (46%), Gaps = 52/439 (11%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y K   + + L + N M   G+  +    + I++   + G   +  E ++   +  I   
Sbjct: 349 YCKAGDLSKALALHNDMESKGIKTNCVIVSTILQYFCEKGMHSQVVEEFKRFKDLRIFLD 408

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            V+YN ++D+ CK  ++ +A+ LL EM+G+    + + Y  LI G+   G+L  A  +  
Sbjct: 409 EVSYNIVVDALCKLEKVDQAVALLDEMKGKQMDMDIMHYTTLINGYCHVGKLVDAFRVFE 468

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M   GL+    ++N ++  +S +GL  EAL L E M ++ + P   T+N++I GLC  G
Sbjct: 469 EMEGKGLEPDVVTFNILLAAFSRRGLANEALKLYEYMKSQDLKPNAITHNVMIEGLCIGG 528

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR---------- 412
           +V++A   F  M  K+    I +Y  ++ GYC + +  +A  LF EL  R          
Sbjct: 529 KVTEAEAFFCNMEDKS----IDNYGAMITGYCEAKHTEKASELFFELSERGLLMDRGYIY 584

Query: 413 -------------------------NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
                                    N+ P+   Y  +I    R GD+  A+ + + +   
Sbjct: 585 KLLEKLCEEGEKDRALWLLKTMLDLNMEPSKDMYGKVITACYRAGDMRNAEAVFDILRKS 644

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
           G+ PD+ TYT M+N  C+   LS AR  F +M  +G++PD   +T  + G LK    SEA
Sbjct: 645 GLTPDIFTYTTMINVCCRQNRLSEARNLFQDMKHRGIKPDLVTFTVLLDGHLKRVH-SEA 703

Query: 508 Y------------RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
           +             + +EM      PD+I Y  L+ G CK+  LE+A  L  +M+  G  
Sbjct: 704 FARKRKEVNLAASNIWKEMQNTEIRPDVICYTALIDGHCKVDRLEDAIGLYDEMMYRGVE 763

Query: 556 PDHITYTSIIHASLEMGDL 574
           PD  T T+++      GD+
Sbjct: 764 PDRATCTALLSGCRNRGDV 782



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 188/427 (44%), Gaps = 74/427 (17%)

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
           +E+ V    +  +  Y+ L+      G + +A +  F++ R+  +P I ++N L+     
Sbjct: 152 KEDTVKHRSSFLIQVYDALVKSYVTAGMLDEAINALFQIKRRGFLPHIFTFNYLMNKLIA 211

Query: 396 SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
           +G +  A  ++ +L+S  L P   TY+ +I   CR G L  A  + + M   G++P+   
Sbjct: 212 NGKVDAALAIYKQLKSLGLNPNDYTYSIIIKAFCRKGSLVEASNVFQEMELCGVIPNAYA 271

Query: 456 YTIMVNGSC---------------KMGNL--------SMAREFFNEML------------ 480
           YT  + G C               K GN+        ++ R F NEM             
Sbjct: 272 YTTYIEGLCANQRSDFGYQVLQAWKEGNIPIDVYAYVAVIRGFCNEMKMDRAEVVLGDME 331

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP------------------- 521
           ++ L  D   Y+  I G  K GD S+A  L  +M +KG                      
Sbjct: 332 KQELISDARCYSELIRGYCKAGDLSKALALHNDMESKGIKTNCVIVSTILQYFCEKGMHS 391

Query: 522 ----------------DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
                           D ++YN++V  LCKL  +++A  LL +M G     D + YT++I
Sbjct: 392 QVVEEFKRFKDLRIFLDEVSYNIVVDALCKLEKVDQAVALLDEMKGKQMDMDIMHYTTLI 451

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
           +    +G L     +F  M  KGL P +VT+ +L+ A + RG    A   +  M+ + ++
Sbjct: 452 NGYCHVGKLVDAFRVFEEMEGKGLEPDVVTFNILLAAFSRRGLANEALKLYEYMKSQDLK 511

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           PN IT+N +I GLC   ++ +A   F +ME++ I      Y  +I   C A + ++A  L
Sbjct: 512 PNAITHNVMIEGLCIGGKVTEAEAFFCNMEDKSI----DNYGAMITGYCEAKHTEKASEL 567

Query: 686 YKEMLDR 692
           + E+ +R
Sbjct: 568 FFELSER 574



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 174/363 (47%), Gaps = 15/363 (4%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V+Q + + ++M    +  D+ +   +I      G  V A  V+  M   G++P +VT+N 
Sbjct: 425 VDQAVALLDEMKGKQMDMDIMHYTTLINGYCHVGKLVDAFRVFEEMEGKGLEPDVVTFNI 484

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +L +F + G   EAL+L   M+ +   PN +T+NV+I G    G++ +A     +M    
Sbjct: 485 LLAAFSRRGLANEALKLYEYMKSQDLKPNAITHNVMIEGLCIGGKVTEAEAFFCNMED-- 542

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
              S  +Y  +I GY E     +A  L  E+  RG+         L+  LC+ G    A 
Sbjct: 543 --KSIDNYGAMITGYCEAKHTEKASELFFELSERGLLMDRGYIYKLLEKLCEEGEKDRAL 600

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
                ML  N+ P    Y  ++    R+G++  A  +FD LR   L P + TY T+I+  
Sbjct: 601 WLLKTMLDLNMEPSKDMYGKVITACYRAGDMRNAEAVFDILRKSGLTPDIFTYTTMINVC 660

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK-MGNLSMARE----------FFN 477
           CR   L  A+ L ++M ++GI PD++T+T++++G  K + + + AR+           + 
Sbjct: 661 CRQNRLSEARNLFQDMKHRGIKPDLVTFTVLLDGHLKRVHSEAFARKRKEVNLAASNIWK 720

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           EM    ++PD   YT  I G  K+    +A  L +EM+ +G  PD  T   L+ G    G
Sbjct: 721 EMQNTEIRPDVICYTALIDGHCKVDRLEDAIGLYDEMMYRGVEPDRATCTALLSGCRNRG 780

Query: 538 SLE 540
            ++
Sbjct: 781 DVD 783



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 145/324 (44%), Gaps = 52/324 (16%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           VF +M   GL PDV   N ++      G + +A ++Y  M    +KP+ +T+N M++  C
Sbjct: 466 VFEEMEGKGLEPDVVTFNILLAAFSRRGLANEALKLYEYMKSQDLKPNAITHNVMIEGLC 525

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA---------RGLIRD-- 303
             G++ EA      M+ +        Y  +ITG+      E+A         RGL+ D  
Sbjct: 526 IGGKVTEAEAFFCNMEDKSID----NYGAMITGYCEAKHTEKASELFFELSERGLLMDRG 581

Query: 304 ------------------------MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
                                   ML L ++ S   Y  +I      G +  A  + + +
Sbjct: 582 YIYKLLEKLCEEGEKDRALWLLKTMLDLNMEPSKDMYGKVITACYRAGDMRNAEAVFDIL 641

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
              G+ P + TY  +I   C+  R+S+AR+ F +M  + + PD++++  LL G+ +  + 
Sbjct: 642 RKSGLTPDIFTYTTMINVCCRQNRLSEARNLFQDMKHRGIKPDLVTFTVLLDGHLKRVH- 700

Query: 400 GEAFL------------LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
            EAF             ++ E+++  + P V+ Y  LIDG C+   LE A  L + M+ +
Sbjct: 701 SEAFARKRKEVNLAASNIWKEMQNTEIRPDVICYTALIDGHCKVDRLEDAIGLYDEMMYR 760

Query: 448 GILPDVITYTIMVNGSCKMGNLSM 471
           G+ PD  T T +++G    G++ M
Sbjct: 761 GVEPDRATCTALLSGCRNRGDVDM 784



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/323 (23%), Positives = 140/323 (43%), Gaps = 15/323 (4%)

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           AF +F  L++    P +  Y  +I  LC +G  ++   +  ++       D  ++ I   
Sbjct: 83  AFSIFSHLKN----PDIPAYAAIIRILCHWGLHKMLHSIFLHLHQNN--NDFTSFDI--- 133

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL-----KLGDTSEAYRLQEEMLA 516
            S  +  LS+      ++ ++     R ++  Q+   L       G   EA     ++  
Sbjct: 134 -SHLLDTLSLPHHIDIDLEKEDTVKHRSSFLIQVYDALVKSYVTAGMLDEAINALFQIKR 192

Query: 517 KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
           +GF P + T+N L++ L   G ++ A  + +++   G  P+  TY+ II A    G L  
Sbjct: 193 RGFLPHIFTFNYLMNKLIANGKVDAALAIYKQLKSLGLNPNDYTYSIIIKAFCRKGSLVE 252

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
             ++F  M   G+ P    YT  I    A  R +  +      +   I  +V  Y A+I 
Sbjct: 253 ASNVFQEMELCGVIPNAYAYTTYIEGLCANQRSDFGYQVLQAWKEGNIPIDVYAYVAVIR 312

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
           G C   ++D+A  +  DME++ ++ +   Y+ LI   C AG+  +AL L+ +M  + I+ 
Sbjct: 313 GFCNEMKMDRAEVVLGDMEKQELISDARCYSELIRGYCKAGDLSKALALHNDMESKGIKT 372

Query: 697 DYCTHSALLLKQLDKDYKVHAVE 719
           +    S +L    +K      VE
Sbjct: 373 NCVIVSTILQYFCEKGMHSQVVE 395



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/213 (23%), Positives = 94/213 (44%), Gaps = 34/213 (15%)

Query: 116 TQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCV---- 171
           ++ G+  D      +LE L E G    A W+++T++ +NM    D + G  +++C     
Sbjct: 572 SERGLLMDRGYIYKLLEKLCEEGEKDRALWLLKTMLDLNMEPSKD-MYGKVITACYRAGD 630

Query: 172 ---SIKILDLLLL------IYTKKSMVEQCLL---------VFNKMLRNGLLPDVKNCNR 213
              +  + D+L        I+T  +M+  C           +F  M   G+ PD+     
Sbjct: 631 MRNAEAVFDILRKSGLTPDIFTYTTMINVCCRQNRLSEARNLFQDMKHRGIKPDLVTFTV 690

Query: 214 II----KVLRDNGFSVKAREV-------YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           ++    K +    F+ K +EV       ++ M    I+P ++ Y  ++D  CK   +++A
Sbjct: 691 LLDGHLKRVHSEAFARKRKEVNLAASNIWKEMQNTEIRPDVICYTALIDGHCKVDRLEDA 750

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
           + L  EM  RG  P+  T   L++G    G+++
Sbjct: 751 IGLYDEMMYRGVEPDRATCTALLSGCRNRGDVD 783


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 150/512 (29%), Positives = 254/512 (49%), Gaps = 52/512 (10%)

Query: 200 LRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEM 259
           L++GL   + NC +       N  S +A + + +M       SI+++N +L +  K    
Sbjct: 59  LQHGLPMFIHNCKK------GNITSTQALQFFDLMMR-----SIISFNLLLGALAKIKHY 107

Query: 260 QEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI 319
            +   L  +M   G SPN  T N+LI                                  
Sbjct: 108 SQVFSLYKKMHLAGLSPNFFTLNILIN--------------------------------C 135

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           +C  +    + E L+    ++ RG  P + TY  LI GLC   R+S+A   F  M +   
Sbjct: 136 LCNVNR---VREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGC 192

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDEL------RSRNLVPTVVTYNTLIDGLCRYGD 433
            P++++Y TL+ G CR+GNI  A  L  E+       + N  P + +YN +ID LC+ G 
Sbjct: 193 WPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGK 252

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
            + A++L   M++QG+ PDV+T++ +++  CK G +  A++F   M+ +G+ PD F +T+
Sbjct: 253 WKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTS 312

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            I G   +GD   A  L   M +KG+ PD+I+Y VL++G CK  ++EEA +L  +M+  G
Sbjct: 313 LIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVG 372

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
             PD  T+  ++      G +   + LF  +    +   L   +V +      G L  A 
Sbjct: 373 KWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAM 432

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
             F+E++   ++ ++ ++N LI+GLC+ R+++ A+ LF  + +EG+ P+  TY I+IN  
Sbjct: 433 ELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGF 492

Query: 674 CNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           C  G    A  L++ M +    P+  T+SALL
Sbjct: 493 CKNGQVDNANILFQMMEENGCTPNLLTYSALL 524



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 153/523 (29%), Positives = 254/523 (48%), Gaps = 42/523 (8%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRD-----NGFSVK 226
           SI   +LLL    K     Q   ++ KM   GL P+    N +I  L +      G S  
Sbjct: 90  SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAM 149

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A  + R     G  P +VTY +++   C E  + EA  L   MQ  GC PN VTY  LI 
Sbjct: 150 AGIMRR-----GYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIK 204

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G  R G +  A  L ++ML                     G    A+N +         P
Sbjct: 205 GLCRTGNINLALKLHQEMLN--------------------GTSPYAINCK---------P 235

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
            + +YNI+I  LCK G+  +A+  F EM+ + V PD+++++ L+   C+ G + EA    
Sbjct: 236 NIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFL 295

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
           + +  R +VP + T+ +LI+G C  GDL+ A++L  +M ++G  PDVI+YT+++ G CK 
Sbjct: 296 ETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKT 355

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
            N+  A + +NEMLR G  PD   +   + G    G   +A +L   +     P +L   
Sbjct: 356 FNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYIC 415

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           +V + GLCK G L EA EL  ++       D  ++  +I    +   L    +LF  + +
Sbjct: 416 SVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQ 475

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
           +GL P +VTY ++I+     G+++ A + F  M+  G  PN++TY+AL++G  +  ++++
Sbjct: 476 EGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEE 535

Query: 647 AYGLFIDMEEEGILPNKYTYTI---LINENCNAGNWQEALRLY 686
              L   M ++ +      YTI   +++++     W + L+ +
Sbjct: 536 VVKLLHKMIQKDVSLAASIYTIVEDMVSKDEKCREWLDILQRF 578



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 70/211 (33%), Positives = 107/211 (50%), Gaps = 6/211 (2%)

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
            +I++N+L+  L K+    +   L +KM   G  P+  T   +I+    +  +R G    
Sbjct: 90  SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAM 149

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
             ++R+G  P +VTYT LI       R+  A   F  MQ  G  PNV+TY  LI GLCR 
Sbjct: 150 AGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRT 209

Query: 642 RRIDQAYGLFIDMEEE------GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIE 695
             I+ A  L  +M            PN ++Y I+I+E C  G W+EA RL+ EM+D+ + 
Sbjct: 210 GNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVR 269

Query: 696 PDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
           PD  T SAL+     +   + A ++LE++ L
Sbjct: 270 PDVVTFSALIDTLCKEGMVIEAKKFLETMML 300



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 140/301 (46%), Gaps = 28/301 (9%)

Query: 103 KPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVL 162
           K + A R F  +  Q GV+ D   F  +++ L + G++  A   +ET++   + GI+  L
Sbjct: 252 KWKEAKRLFNEMVDQ-GVRPDVVTFSALIDTLCKEGMVIEAKKFLETMM---LRGIVPDL 307

Query: 163 IG-----------GGLSSCVSI-----------KILDLLLLI--YTKKSMVEQCLLVFNK 198
                        G L S   +            ++   +LI  Y K   VE+ + ++N+
Sbjct: 308 FTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNE 367

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           MLR G  PD+K    ++K L   G    A++++ ++    +  ++   +  LD  CK G 
Sbjct: 368 MLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGC 427

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           + EA+EL  E++      +  ++N LI G  +  +LE A  L   + + GL+    +Y  
Sbjct: 428 LFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCI 487

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           +I G+ + G +  A  L + M   G  P L TY+ L++G  K  ++ +      +M++K+
Sbjct: 488 MINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKD 547

Query: 379 V 379
           V
Sbjct: 548 V 548


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 148/505 (29%), Positives = 247/505 (48%), Gaps = 8/505 (1%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   ++Q   + ++M   G+ P V   N +IK L   G    A   ++ +      P I+
Sbjct: 42  KAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDII 101

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRG-CSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           T+N ++D+  K G ++EA ++   M     C PN VTY  +I G  ++G+L++A  L+  
Sbjct: 102 TFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDL 161

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M + G   +  +Y+ ++ G  + G   +   L +EM  RG  P +  YN L+ GLCK  R
Sbjct: 162 MNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRR 221

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           + +A      M+R    P +++YN+L+  +CRS  +  AF L   +  R   P V+ YNT
Sbjct: 222 LDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNT 281

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG------NLSMAREFFN 477
           +I GLCR   L+ AQ L + M+    +PDVITY+ +++G CK         L  A E   
Sbjct: 282 VIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILE 341

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            M + G  P+   Y   I G  +   + +A  L   M+     PDL ++++++  LCK  
Sbjct: 342 MMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSH 401

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            L+ A ++   M      P+ + Y ++I    + G++ +   +F  M+ +   P + TY 
Sbjct: 402 DLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMV-ESFRPGVATYN 460

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
            ++      GR+E A      M  K   P+  +Y ALI GLCR+  +++AY LF  +E +
Sbjct: 461 SVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAK 520

Query: 658 GILPNKYTYTILINENCNAGNWQEA 682
           G       Y +L+NE C      +A
Sbjct: 521 GFAMEVGVYNVLVNELCKKKRLSDA 545



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 145/501 (28%), Positives = 241/501 (48%), Gaps = 46/501 (9%)

Query: 247 NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
           N  L+   + G+  +A++L  E +   C PN  TY  LI G  + G+L+QA  L+ +M  
Sbjct: 2   NCALNLLVRAGQHGQAVQLFREER---CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
            G+      +N +I G  + G   +AL   + +      P + T+NIL+  L K GRV +
Sbjct: 59  RGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118

Query: 367 ARHRFFEM-LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
           A   F  M      +P++++Y T++ G C+ G +  A  L D +      P V+TY+ L+
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           +GLC+ G  +    L + M  +G  PDVI Y  ++NG CK   L  A E    M+R G  
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCY 238

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           P    Y + +    +      A+RL + M  +G PPD+I YN ++ GLC+   L++A  L
Sbjct: 239 PTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQAL 298

Query: 546 LRKMVGDGFIPDHITYTSII---------------HASLEMGD----------------- 573
           L++MV    +PD ITY++II                A+ E+ +                 
Sbjct: 299 LKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVV 358

Query: 574 ---LRRGRD------LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
              L R R       L   M+   + P L +++++I +      L+ A+  F  M  +  
Sbjct: 359 IEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSEREC 418

Query: 625 RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
           +PN + Y ALI+GL +   +D+A  +F ++  E   P   TY  +++  C  G  +EA+R
Sbjct: 419 KPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVR 477

Query: 685 LYKEMLDREIEPDYCTHSALL 705
           + + M+ +E  PD  ++ AL+
Sbjct: 478 MVEGMIHKECFPDGASYGALI 498



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 153/559 (27%), Positives = 263/559 (47%), Gaps = 26/559 (4%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           A++ FR     P    +EF + +++  L ++G L  AY             +LD +   G
Sbjct: 17  AVQLFREERCVP----NEFTYGSLIHGLCKAGKLDQAYE------------LLDEMRDRG 60

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
           +   V++   + ++    K       L  F  +      PD+   N ++  L  +G   +
Sbjct: 61  IPPGVAVH--NGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118

Query: 227 AREVYRMMGEFG-IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           A +++  M       P++VTY T+++  CK+G++  A+ELL  M   GC PN +TY+VL+
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            G  + G  ++   L+++M + G +     YN ++ G  +   L EAL L + M+  G  
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCY 238

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           PT+ TYN L+   C+  +V  A      M  +   PD+I+YNT++ G CR   + +A  L
Sbjct: 239 PTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQAL 298

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCR------YGDLEVAQQLKENMINQGILPDVITYTIM 459
             ++ +   VP V+TY+T+IDGLC+         LE A ++ E M   G  P+  TY ++
Sbjct: 299 LKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVV 358

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           + G C+      A      M+   + PD  +++  I    K  D   AY++   M  +  
Sbjct: 359 IEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSEREC 418

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
            P+ + Y  L+ GL K G +++A  +   MV + F P   TY S++     +G +     
Sbjct: 419 KPNPVAYAALIDGLSKGGEVDKAVRVFELMV-ESFRPGVATYNSVLDGLCGVGRIEEAVR 477

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
           +   M+ K   P   +Y  LI        +E A+  F  ++ KG    V  YN L+N LC
Sbjct: 478 MVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELC 537

Query: 640 RLRRIDQAYGLFIDMEEEG 658
           + +R+  A+G+   + E G
Sbjct: 538 KKKRLSDAHGVANKLIEAG 556



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 132/478 (27%), Positives = 233/478 (48%), Gaps = 34/478 (7%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETV----VCV-NMHGILDV 161
           AL +F+ V        D   F  +++ L++SG +  A+ + E++     C+ N+     V
Sbjct: 84  ALGYFKTVAGTK-CTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTV 142

Query: 162 LIG----GGLSSCVSIKILDLL--------LLIYT-------KKSMVEQCLLVFNKMLRN 202
           + G    G L    +I++LDL+        ++ Y+       K    ++   +  +M R 
Sbjct: 143 INGLCKDGKLDR--AIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRR 200

Query: 203 GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           G  PDV   N ++  L  +    +A E+ ++M   G  P++VTYN++++ FC+  ++  A
Sbjct: 201 GFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRA 260

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
             L+  M  RGC P+ + YN +I G  R+  L+ A+ L++ M+         +Y+ II G
Sbjct: 261 FRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDG 320

Query: 323 YSEKGLLVEALNLE------EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
             +   +     LE      E M   G  P   TY ++I GLC+  +   A      M+ 
Sbjct: 321 LCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMID 380

Query: 377 KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
             V+PD+ S++ ++   C+S ++  A+ +F  +  R   P  V Y  LIDGL + G+++ 
Sbjct: 381 SEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDK 440

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
           A ++ E M+ +   P V TY  +++G C +G +  A      M+ K   PD  +Y   I 
Sbjct: 441 AVRVFELMV-ESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIR 499

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           G  ++    EAY L + + AKGF  ++  YNVLV+ LCK   L +A+ +  K++  G+
Sbjct: 500 GLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGY 557



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 165/330 (50%), Gaps = 5/330 (1%)

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
           R+G  G+A  LF E R    VP   TY +LI GLC+ G L+ A +L + M ++GI P V 
Sbjct: 10  RAGQHGQAVQLFREERC---VPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVA 66

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
            +  ++ G CK G    A  +F  +      PD   +   +   +K G   EA+++ E M
Sbjct: 67  VHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESM 126

Query: 515 -LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
             +    P+++TY  +++GLCK G L+ A ELL  M   G  P+ ITY+ ++    + G 
Sbjct: 127 HTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGR 186

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
             +G  L   M R+G  P ++ Y  L++      RL+ A      M   G  P V+TYN+
Sbjct: 187 TDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNS 246

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
           L+   CR +++D+A+ L   M E G  P+   Y  +I   C      +A  L K+M+   
Sbjct: 247 LMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAAR 306

Query: 694 IEPDYCTHSALLLKQLDKDYKVHAVEYLES 723
             PD  T+S  ++  L KD++V A   LE+
Sbjct: 307 CVPDVITYST-IIDGLCKDWRVDADWKLEA 335



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 2/100 (2%)

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           PN  TY +LI+GLC+  ++DQAY L  +M + GI P    +  +I   C AG + +AL  
Sbjct: 28  PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGY 87

Query: 686 YKEMLDREIEPDYCTHSALLLKQLDKDYKV-HAVEYLESL 724
           +K +   +  PD  T + +L+  L K  +V  A +  ES+
Sbjct: 88  FKTVAGTKCTPDIITFN-ILVDALVKSGRVEEAFQIFESM 126



 Score = 43.5 bits (101), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 34/151 (22%), Positives = 57/151 (37%), Gaps = 36/151 (23%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F  M      P+      +I  L   G   KA  V+ +M E   +P + TYN++LD  C
Sbjct: 409 IFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVE-SFRPGVATYNSVLDGLC 467

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTY--------------------------------- 281
             G ++EA+ ++  M  + C P+G +Y                                 
Sbjct: 468 GVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVG 527

Query: 282 --NVLITGFSRNGELEQARGLIRDMLKLGLK 310
             NVL+    +   L  A G+   +++ G K
Sbjct: 528 VYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558


>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 234/438 (53%), Gaps = 3/438 (0%)

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           + EA++L   M      P+ V ++ L++  +++   +    L  +M   G+    ++YN 
Sbjct: 50  LDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNI 109

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           +I         V AL++  +M+  G  P + T + LI G C+  RV  A     +M    
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMR 169

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
              D++ YNT++ G+C++G +  A +LF  +    +    VTYN+L+ GLC  G    A 
Sbjct: 170 CKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAA 229

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
           +L  +M+ + I+P+VIT+T ++N   + G    A++F+ EM+R+ + PD F Y + I G 
Sbjct: 230 RLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGL 289

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
              G   EA ++ + M+ KG  PD++TYN L++G CK   ++E  +L+R+M   G + D 
Sbjct: 290 CMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDT 349

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
           +T+ +II    + G     +++F+ M   G  P + TY++L++      R+E A + F  
Sbjct: 350 VTFNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALVLFES 406

Query: 619 MQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGN 678
           MQ   +  ++ TYN +I+G+C +  ++ A+ LF  +  +G+ P+  TYT +I+  C    
Sbjct: 407 MQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRL 466

Query: 679 WQEALRLYKEMLDREIEP 696
           W +A  LY++M +  + P
Sbjct: 467 WDKADFLYRKMQEDGLLP 484



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 131/438 (29%), Positives = 224/438 (51%), Gaps = 3/438 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +++ + +F  M+++  LP +   ++++  +  +        ++  M   GI   + TYN 
Sbjct: 50  LDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNI 109

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++  C+      AL ++ +M   G  P+ VT + LI GF +   +  A  L+  M ++ 
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMR 169

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            K+    YN II G+ + GL+  AL L   M   GV     TYN L+ GLC  GR SDA 
Sbjct: 170 CKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAA 229

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               +M+ ++++P++I++  L+  + R G   EA   ++E+  R + P V TYN++I GL
Sbjct: 230 RLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGL 289

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C +G ++ A+Q+ + M+ +G  PDV+TY  ++NG CK   +    +   EM ++GL  D 
Sbjct: 290 CMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDT 349

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             + T I G  + G    A   QE     G  P++ TY++L++GLC    +E+A  L   
Sbjct: 350 VTFNTIIQGYFQAGRPDAA---QEIFSRMGSRPNIRTYSILLYGLCYNWRVEKALVLFES 406

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M       D  TY  +IH    +G++    DLF ++  KGL P +VTYT +I     +  
Sbjct: 407 MQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRL 466

Query: 609 LELAFMYFSEMQVKGIRP 626
            + A   + +MQ  G+ P
Sbjct: 467 WDKADFLYRKMQEDGLLP 484



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/374 (31%), Positives = 194/374 (51%), Gaps = 3/374 (0%)

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
            ++L   M   G+   L TYNI+I  LC+  R   A     +M++    PD+++ ++L+ 
Sbjct: 88  VISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLIN 147

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
           G+C+   +  A  L  ++        VV YNT+IDG C+ G +  A  L   M   G+  
Sbjct: 148 GFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRA 207

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           D +TY  +V G C  G  S A     +M+ + + P+   +T  I   ++ G   EA +  
Sbjct: 208 DTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFY 267

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
           EEM+ +   PD+ TYN ++HGLC  G ++EA ++L  MV  G  PD +TY ++I+   + 
Sbjct: 268 EEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKT 327

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
             +  G  L   M ++GL    VT+  +I  +   GR + A   FS M   G RPN+ TY
Sbjct: 328 KRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTY 384

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           + L+ GLC   R+++A  LF  M++  +  +  TY I+I+  C  GN ++A  L+  +  
Sbjct: 385 SILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSF 444

Query: 692 REIEPDYCTHSALL 705
           + +EPD  T++ ++
Sbjct: 445 KGLEPDVVTYTTMI 458



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 160/304 (52%), Gaps = 3/304 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K  +V   L++F +M R+G+  D    N ++  L  +G    A  + R M    I P+
Sbjct: 184 FCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPN 243

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           ++T+  ++++F +EG+  EA +   EM  R   P+  TYN +I G   +G++++A+ ++ 
Sbjct: 244 VITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILD 303

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M+  G      +YN +I G+ +   + E   L  EM  RG+     T+N +I G  + G
Sbjct: 304 LMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAG 363

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R   A+  F  M  +   P+I +Y+ LLYG C +  + +A +LF+ ++   +   + TYN
Sbjct: 364 RPDAAQEIFSRMGSR---PNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYN 420

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            +I G+C  G++E A  L  ++  +G+ PDV+TYT M++G C+      A   + +M   
Sbjct: 421 IVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQED 480

Query: 483 GLQP 486
           GL P
Sbjct: 481 GLLP 484



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 150/310 (48%)

Query: 396 SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
           S N+ EA  LF  +     +P++V ++ L+  + +  + ++   L  NM   GI  D+ T
Sbjct: 47  SMNLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYT 106

Query: 456 YTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML 515
           Y I++N  C+     +A     +M++ G +PD    ++ I G  +      A  L  +M 
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKME 166

Query: 516 AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLR 575
                 D++ YN ++ G CK G +  A  L  +M  DG   D +TY S++      G   
Sbjct: 167 EMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRS 226

Query: 576 RGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALI 635
               L  +M+ + + P ++T+T LI+A    G+   A  ++ EM  + I P+V TYN++I
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMI 286

Query: 636 NGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIE 695
           +GLC   ++D+A  +   M  +G  P+  TY  LIN  C      E  +L +EM  R + 
Sbjct: 287 HGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLV 346

Query: 696 PDYCTHSALL 705
            D  T + ++
Sbjct: 347 VDTVTFNTII 356


>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
 gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
          Length = 631

 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 150/494 (30%), Positives = 246/494 (49%), Gaps = 2/494 (0%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLL-PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           L+  Y K    ++ L +F ++ + G   P+  + + ++  L     +  A  V++ M   
Sbjct: 131 LIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGA 190

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G+K  +   NT++   C+ G +++A  LL  M    C+ +  TY +L+    R G++ + 
Sbjct: 191 GLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEV 250

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
              +      G  +SA +YN II G+   G L EA  L E  +T+   P + TYN+LI  
Sbjct: 251 ASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLI-A 309

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           LCK  ++ +A   F E  +  V+ D+ +Y+ L+  + ++G   +A  +F  ++    +P 
Sbjct: 310 LCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPD 369

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
            V YN LI  L + G ++ A +L E+M  +GI+PD  TY I+++     G    A  FF 
Sbjct: 370 TVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFG 429

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            M R+   PD   Y T + G  KL  T EA  L +EM A    PDL T+  L+  L K G
Sbjct: 430 MMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAG 489

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            +E+A E   ++V  G  P+   Y ++I      G + +G +LF +M+     P  +TYT
Sbjct: 490 RMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYT 549

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           +L+   + RG   +A     EM  +G  P + TYN LI  L    +++ AY LF +M  +
Sbjct: 550 ILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAK 609

Query: 658 GILPNKYTYTILIN 671
           G  P+  TY+ L N
Sbjct: 610 GFNPDMQTYSALPN 623



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 147/467 (31%), Positives = 225/467 (48%), Gaps = 4/467 (0%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG-CSPNGVTYNVLITGFSRNGELEQARG 299
           P +V YNT++  +CK G+   AL++   ++  G C PN V+++ L+    +      A  
Sbjct: 123 PDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALA 182

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
           + ++ML  GLK   +  N +I      G+L +A  L   M     A    TY IL+   C
Sbjct: 183 VFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHC 242

Query: 360 KWGRVSDARHRFFEMLRKNVIP-DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           + G++ +    F E+ R +      ++YN ++ G+ R G + EA  LF+   ++  VP V
Sbjct: 243 RAGQMHEVAS-FMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDV 301

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
            TYN LI  LC+   LE A  L +     G++ DV TY+ +++   K G  + A E F  
Sbjct: 302 FTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYN 360

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M + G  PD   Y   I+   K G   EA  L E+M  KG  PD  TYN+++  L   G 
Sbjct: 361 MQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGR 420

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
            E+A      M      PD +TY ++++   ++       DLF+ M      P L T+  
Sbjct: 421 YEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGT 480

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           LI   A  GR+E A    + +   G  PN   YNALI+G CR  ++D+ Y LF DM E  
Sbjct: 481 LIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECS 540

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             P+  TYTIL+      G+   A+ L +EM+     P   T++ L+
Sbjct: 541 CFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLI 587



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 153/518 (29%), Positives = 242/518 (46%), Gaps = 3/518 (0%)

Query: 189 VEQCLLVFNKMLRN-GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG-IKPSIVTY 246
           VEQ + +F+ M       PDV   N +I      G   +A +++R + + G  KP+ V++
Sbjct: 105 VEQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSF 164

Query: 247 NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
           +T++   CK     +AL +  EM G G   +    N LI    R G L QAR L+  M  
Sbjct: 165 DTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTA 224

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
                 A +Y  ++  +   G + E  +  E     G A +   YN +I G  + GR+++
Sbjct: 225 HACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAE 284

Query: 367 ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
           A   F   + K  +PD+ +YN LL   C+S  + EA  LF E     +V  V TY+ L+D
Sbjct: 285 ATQLFESTMTKESVPDVFTYN-LLIALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMD 343

Query: 427 GLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
              + G    A ++  NM   G +PD + Y ++++   K G +  A E   +M RKG+ P
Sbjct: 344 AFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMP 403

Query: 487 DRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
           D   Y   I      G   +AY     M  +   PD++TYN L++GL KL   +EA +L 
Sbjct: 404 DCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLF 463

Query: 547 RKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAAR 606
            +M  +  +PD  T+ ++I    + G +    +    +++ G +P    Y  LI      
Sbjct: 464 DEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRS 523

Query: 607 GRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
           G+++  +  F +M      P+ ITY  L+ G  R      A  L  +M  EG  P   TY
Sbjct: 524 GQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATY 583

Query: 667 TILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
            +LI     AG  ++A  L+KEM+ +   PD  T+SAL
Sbjct: 584 NVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 621



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 137/487 (28%), Positives = 231/487 (47%), Gaps = 3/487 (0%)

Query: 240 KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR-GCSPNGVTYNVLITGFSRNGELEQAR 298
           +P  V +   +   C+   +++A+ L  +M+    C+P+ V YN LI G+ + G+ ++A 
Sbjct: 86  QPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRAL 145

Query: 299 GLIRDMLKLG-LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
            + R + + G  K +A S++ ++    +     +AL + +EM+  G+   +   N LI+ 
Sbjct: 146 DMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHC 205

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
            C+ G +  AR     M       D  +Y  L+  +CR+G + E     +  R      +
Sbjct: 206 TCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALS 265

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
            V YN +I G  R G L  A QL E+ + +  +PDV TY +++   CK   L  A   F 
Sbjct: 266 AVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLI-ALCKSKQLEEALTLFQ 324

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           E  + G+  D F Y+  +    K G  ++A  +   M   G  PD + YNVL+  L K G
Sbjct: 325 EAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQG 384

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            ++EA ELL  M   G +PD  TY  +I      G   +    F  M R+  SP +VTY 
Sbjct: 385 KVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYN 444

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
            L++      R + A   F EMQ     P++ T+  LI+ L +  R++ A      + + 
Sbjct: 445 TLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKM 504

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHA 717
           G  PN Y Y  LI+  C +G   +   L+++M++    PD  T++ L+L    + +   A
Sbjct: 505 GHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMA 564

Query: 718 VEYLESL 724
           +E L+ +
Sbjct: 565 MELLQEM 571



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 149/532 (28%), Positives = 241/532 (45%), Gaps = 44/532 (8%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A   Y+ + + G+     T   M+   CK G  +   ELL E++ +G   + VT    I 
Sbjct: 2   ALATYKHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQ 61

Query: 287 GFSRNGELEQARGLIRDMLKLGL-KVSAHSYNPIICGYSEKGLLVEALNLEEEM-VTRGV 344
            F R G+L+ A G++ DM +    +    ++   +    E   + +A+ L ++M  T   
Sbjct: 62  AFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDC 121

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRK-NVIPDIISYNTLLYGYCRSGNIGEAF 403
           AP +  YN LI G CK G    A   F  + ++ +  P+ +S++TL+   C+     +A 
Sbjct: 122 APDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDAL 181

Query: 404 LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
            +F E+    L   V   NTLI   CR G L  A++L  +M       D  TY I+VN  
Sbjct: 182 AVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAH 241

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
           C+ G +     F       G       Y   I G ++ G  +EA +L E  + K   PD+
Sbjct: 242 CRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDV 301

Query: 524 ITYNVLVHGLCKLGSLEEANELLRK----------------------------------- 548
            TYN+L+  LCK   LEEA  L ++                                   
Sbjct: 302 FTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYN 360

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M   G +PD + Y  +I    + G +    +L  +M RKG+ P   TY ++I   ++ GR
Sbjct: 361 MQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGR 420

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
            E A+ +F  M+ +   P+V+TYN L+NGL +LRR D+A  LF +M+    +P+  T+  
Sbjct: 421 YEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGT 480

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL-----LKQLDKDYKV 715
           LI+    AG  ++AL     ++     P+   ++AL+       Q+DK Y++
Sbjct: 481 LIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYEL 532



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 152/321 (47%), Gaps = 21/321 (6%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSA---YWVVETVVCVNMHGILDVLI 163
           AL  F+  E Q GV  D F +  +++   ++G    A   ++ ++   C+    + +VLI
Sbjct: 319 ALTLFQEAE-QGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLI 377

Query: 164 GGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGF 223
                SC+             K+  V++ L +   M R G++PD +  N +I VL   G 
Sbjct: 378 -----SCLG------------KQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGR 420

Query: 224 SVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNV 283
             KA   + MM      P +VTYNT+L+   K     EA +L  EMQ   C P+  T+  
Sbjct: 421 YEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGT 480

Query: 284 LITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG 343
           LI   ++ G +E A      ++K+G   +++ YN +I G+   G + +   L ++M+   
Sbjct: 481 LIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECS 540

Query: 344 VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF 403
             P   TY IL+ G  + G  S A     EM+R+   P + +YN L+     +G + +A+
Sbjct: 541 CFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAY 600

Query: 404 LLFDELRSRNLVPTVVTYNTL 424
            LF E+ ++   P + TY+ L
Sbjct: 601 TLFKEMIAKGFNPDMQTYSAL 621


>gi|357140210|ref|XP_003571663.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Brachypodium distachyon]
          Length = 841

 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 146/544 (26%), Positives = 265/544 (48%), Gaps = 9/544 (1%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           ++L+  Y+          + ++M  +G  P V   N ++ VL  +G  V AR ++  M +
Sbjct: 249 NILIKGYSVFGQAGDAFQLLDEMRESGCQPTVVTYNILVNVLCHDGNMVDARRLFDEMVK 308

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITG---FSRNGE 293
            GI+ + +T+N ++D + K G M EA     EM+ RG  P+  T+N+L  G   F +  +
Sbjct: 309 VGIEANTITFNVLVDGYAKAGRMDEAYAACREMKARGLVPDCCTFNILSAGAYKFGKAVQ 368

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           L   +  + +M   G ++SA S + ++C     G L +A  L    + +GV  ++A +N 
Sbjct: 369 LAHGQQELHEMF--GSRISADSVDMVVCRLCWDGRLDDAWKLVCSAIEQGVPVSVAGFNA 426

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           L+    K G    A   +  M +  ++P   ++N L+ G C  G + +A LL + +  + 
Sbjct: 427 LVAAYSKEGFDEQALEVYSVMNKIGLVPSSPTFNYLIMGLCNQGRLDDAQLLLEHMICKG 486

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
                 ++   +D   R G++E A +  ++M+  G+ PD I ++  ++G C++ +++ A 
Sbjct: 487 YC-VGTSFTIYMDSYFRSGNVEGALKCWDDMVKVGVQPDFIAFSAYISGLCRLDHVNEAY 545

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
           + F EM  +G  P+   Y + I+   ++G  SEA +L+++M   G  PD+ T N+L+ G 
Sbjct: 546 QAFVEMTGRGFVPNNITYNSLISAFCRVGYVSEALKLEKKMRQSGLIPDVFTSNILIDGF 605

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
           CK G L+  N+    M   G  PD +TY +II+A     D+       N ML  G  P +
Sbjct: 606 CKEGRLDMMNKRFLDMYNSGLTPDVVTYNTIINAYCGAQDMSSAMIFMNKMLADGCEPDI 665

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
            TY + +H+      L  A     E+   G  PN +TYN L++G+C    +D+A  L   
Sbjct: 666 FTYNIWMHSLCNNHLLNRAVKMLDELVAMGCMPNSVTYNTLMDGICS-DVLDRAMILTGK 724

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL--LLKQLDK 711
           + +    PN  T  +  +  C  G  + AL   +++ +  +  D  T + L    K+++ 
Sbjct: 725 LIKMAFQPNTVTVNVFFSHFCKQGFGKRALVWAEKLKEDSVAFDDATMNILDWAYKEMED 784

Query: 712 DYKV 715
           D + 
Sbjct: 785 DSQA 788



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 162/620 (26%), Positives = 280/620 (45%), Gaps = 73/620 (11%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
           L L L  +    M  + L+V   +   G  P +     ++++L   G    A +V+  M 
Sbjct: 143 LRLALHAFLAAGMASEALVVLAHIRCGGNTPSLSAIAALLRLLFRAGEVRPAWKVFVEMT 202

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS------ 289
             G +PS+  +N M+  FC  G +   L LL  M      P+  +YN+LI G+S      
Sbjct: 203 ARGPRPSLAIFNAMILGFCHRGLVHIGLGLLGVMWRFNVIPDACSYNILIKGYSVFGQAG 262

Query: 290 -----------------------------RNGELEQARGLIRDMLKLGLKVSAHSYNPII 320
                                         +G +  AR L  +M+K+G++ +  ++N ++
Sbjct: 263 DAFQLLDEMRESGCQPTVVTYNILVNVLCHDGNMVDARRLFDEMVKVGIEANTITFNVLV 322

Query: 321 CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG----------------------- 357
            GY++ G + EA     EM  RG+ P   T+NIL  G                       
Sbjct: 323 DGYAKAGRMDEAYAACREMKARGLVPDCCTFNILSAGAYKFGKAVQLAHGQQELHEMFGS 382

Query: 358 -------------LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
                        LC  GR+ DA       + + V   +  +N L+  Y + G   +A  
Sbjct: 383 RISADSVDMVVCRLCWDGRLDDAWKLVCSAIEQGVPVSVAGFNALVAAYSKEGFDEQALE 442

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
           ++  +    LVP+  T+N LI GLC  G L+ AQ L E+MI +G      ++TI ++   
Sbjct: 443 VYSVMNKIGLVPSSPTFNYLIMGLCNQGRLDDAQLLLEHMICKGYCVGT-SFTIYMDSYF 501

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
           + GN+  A + +++M++ G+QPD  A++  I+G  +L   +EAY+   EM  +GF P+ I
Sbjct: 502 RSGNVEGALKCWDDMVKVGVQPDFIAFSAYISGLCRLDHVNEAYQAFVEMTGRGFVPNNI 561

Query: 525 TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM 584
           TYN L+   C++G + EA +L +KM   G IPD  T   +I    + G L      F +M
Sbjct: 562 TYNSLISAFCRVGYVSEALKLEKKMRQSGLIPDVFTSNILIDGFCKEGRLDMMNKRFLDM 621

Query: 585 LRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRI 644
              GL+P +VTY  +I+A+     +  A ++ ++M   G  P++ TYN  ++ LC    +
Sbjct: 622 YNSGLTPDVVTYNTIINAYCGAQDMSSAMIFMNKMLADGCEPDIFTYNIWMHSLCNNHLL 681

Query: 645 DQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
           ++A  +  ++   G +PN  TY  L++  C +     A+ L  +++    +P+  T +  
Sbjct: 682 NRAVKMLDELVAMGCMPNSVTYNTLMDGIC-SDVLDRAMILTGKLIKMAFQPNTVTVNVF 740

Query: 705 LLKQLDKDYKVHAVEYLESL 724
                 + +   A+ + E L
Sbjct: 741 FSHFCKQGFGKRALVWAEKL 760


>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
          Length = 619

 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 147/496 (29%), Positives = 243/496 (48%), Gaps = 17/496 (3%)

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
           + ++ VL D G    A      + E  + P+  T N +L    ++   +    L  ++  
Sbjct: 126 DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLP- 184

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
              +PN  T+N++I    + GEL +AR L   M ++G      ++N +I GY + G L E
Sbjct: 185 ---APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDE 241

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
              L EEM   G    + TYN LI   CK+GR+  A   F  M R+ V+ ++++++T + 
Sbjct: 242 VEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVD 301

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
            +C+ G + EA  LF ++R R +     TY  LIDG C+ G L+ A  L + M+ QG+  
Sbjct: 302 AFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL 361

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           +V+TYT++V+G CK   ++ A +    M + G++ +   YTT I G     ++ +A  L 
Sbjct: 362 NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLL 421

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
            EM  KG   D+  Y  L+ GLC +  L+EA  LL KM   G  P++I YT+++ A  + 
Sbjct: 422 SEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKS 481

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
           G +     +   +L  G  P               G L  A   F+EM  KG+  + + Y
Sbjct: 482 GKVPEAIAMLQKILDSGFQPN-------------NGCLNEAVQLFNEMVHKGMSLDKVVY 528

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
            AL++G  +   +  A+ L   M + G+  + + YT  I+  CN     EA  ++ EM+ 
Sbjct: 529 TALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIG 588

Query: 692 REIEPDYCTHSALLLK 707
             I PD   ++ L+ +
Sbjct: 589 HGIAPDRAVYNCLITQ 604



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 135/439 (30%), Positives = 212/439 (48%), Gaps = 13/439 (2%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P+V   N +I  L   G   +AR ++  M E G  P +VT+N+++D + K GE+ E  +L
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           + EM+  GC  + VTYN LI  F + G +E A G    M + G+  +  +++  +  + +
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
           +GL+ EA+ L  +M  RG+A    TY  LI G CK GR+ DA     EM+R+ V  ++++
Sbjct: 306 EGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVT 365

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           Y  L+ G C+   + EA  +   +    +    + Y TLI G     + E A  L   M 
Sbjct: 366 YTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMK 425

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
           N+G+  D+  Y  ++ G C +  L  A+    +M   GL+P+   YTT +    K G   
Sbjct: 426 NKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVP 485

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           EA  + +++L  GF P+              G L EA +L  +MV  G   D + YT+++
Sbjct: 486 EAIAMLQKILDSGFQPN-------------NGCLNEAVQLFNEMVHKGMSLDKVVYTALL 532

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
              L+ G+L     L   M+  GL   L  YT  I        +  A   FSEM   GI 
Sbjct: 533 DGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIA 592

Query: 626 PNVITYNALINGLCRLRRI 644
           P+   YN LI  +  +R +
Sbjct: 593 PDRAVYNCLITQIPEIREL 611



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 203/400 (50%), Gaps = 6/400 (1%)

Query: 300 LIRDMLKLGLKVSAHS--YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
           L R  L LG + SA +   + ++   +++GLL +A+     +    V P   T N ++  
Sbjct: 107 LHRAALALGPRRSALASVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLR 166

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           L +  R      R FE L     P++ ++N ++   C+ G + EA  LF  ++    +P 
Sbjct: 167 LAR-DRSGRLVRRLFEQLPA---PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPD 222

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           VVT+N+LIDG  + G+L+  +QL E M   G   DV+TY  ++N  CK G +  A  +F 
Sbjct: 223 VVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFA 282

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            M R+G+  +   ++T +    K G   EA +L  +M  +G   +  TY  L+ G CK G
Sbjct: 283 AMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAG 342

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            L++A  LL +MV  G   + +TYT ++    +   +    D+   M + G+    + YT
Sbjct: 343 RLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYT 402

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
            LIH H      E A    SEM+ KG+  ++  Y ALI GLC + ++D+A  L   M+E 
Sbjct: 403 TLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDES 462

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           G+ PN   YT +++    +G   EA+ + +++LD   +P+
Sbjct: 463 GLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPN 502



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 164/349 (46%), Gaps = 13/349 (3%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
           F  M R G++ +V   +  +      G   +A +++  M   G+  +  TY  ++D  CK
Sbjct: 281 FAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCK 340

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
            G + +A+ LL EM  +G   N VTY VL+ G  +  ++ +A  ++R M K G++ +   
Sbjct: 341 AGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELL 400

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           Y  +I G+       +AL L  EM  +G+   ++ Y  LI GLC   ++ +A+    +M 
Sbjct: 401 YTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMD 460

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
              + P+ I Y T++    +SG + EA  +  ++      P               G L 
Sbjct: 461 ESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPN-------------NGCLN 507

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            A QL   M+++G+  D + YT +++G  K GNL  A     +M+  GLQ D F YT  I
Sbjct: 508 EAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFI 567

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
           +G   L    EA  +  EM+  G  PD   YN L+  + ++  L   N+
Sbjct: 568 SGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLITQIPEIRELGGGNK 616


>gi|357449261|ref|XP_003594907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483955|gb|AES65158.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1385

 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 161/511 (31%), Positives = 252/511 (49%), Gaps = 28/511 (5%)

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
           LR+N     A E +R+MG  G  PS+ T N +L S  K+ E+        EM     SPN
Sbjct: 120 LRENMVG-DAVEAFRLMGFRGFSPSVFTCNMVLGSLVKDREVDLFWSFFKEMIANRVSPN 178

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
             T+N+L+      G+ + A  L+R M + G   +A +YN ++  Y +KG    A  L +
Sbjct: 179 VATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYCKKGRYKAASELID 238

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI-PDIISYNTLLYGYCRS 396
            M ++G+A  + TYN+LI  LC+  R S   +     +RKN++ P+ I+YNTL+ G  + 
Sbjct: 239 AMASKGIAADVCTYNVLIDDLCRKSR-SAKGYLILRRMRKNMVYPNEITYNTLINGLVKE 297

Query: 397 GNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
           G IG A  +F+E+   NL+P  VTYNTLI G C  G++E A +L + M++ G+ P+ +TY
Sbjct: 298 GKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTY 357

Query: 457 TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA 516
             ++NG  K     +       M   G++    +YTT I G  K G   EA +L ++ML 
Sbjct: 358 GALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCKNGLLEEAVQLLDDMLK 417

Query: 517 KGFPPDLITYNVLVHGL-------------------CKLGSLEEANELLRKMVGDGFIPD 557
               PD++T++VLV+G                    CK+G+L+EA      M   G + D
Sbjct: 418 VSVSPDIVTFSVLVNGFLKTGLVPNRVLHSTLIYNYCKMGNLKEALNAYAVMNQSGHVSD 477

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
           H T + ++ +    G L       ++M R GL+P+ VT+  +I  +   G    AF  F 
Sbjct: 478 HFTSSVLVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTYGNSGDALKAFSVFD 537

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP---NKYTYTILINENC 674
           +M   G  P+  TY  L+ GL     I++A    I M     +P       Y  ++    
Sbjct: 538 KMNSLGHLPSQFTYEGLLKGLLIGGHINEAK---IFMHRPSSIPYAIGSTFYNTMLTLTS 594

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            +GN   A+ L  EM+     PD  T+++L+
Sbjct: 595 RSGNLSNAVALLDEMVMNNFVPDSFTYTSLI 625



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 196/762 (25%), Positives = 312/762 (40%), Gaps = 153/762 (20%)

Query: 106 IALRFFRWVETQPGVKRDEF--VFCTILEILIESGLLRSAYWVVETVVCVNMHGILDV-- 161
           +AL+F  WV  +P ++ +    +  T   IL+++ +    Y   +T +   +H  +DV  
Sbjct: 38  LALKFLNWVIKKPNLEINHLTHIISTTTHILVKARM----YGYAKTTLSHMLH--MDVGF 91

Query: 162 --LIGGGLSS---CVS-IKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRII 215
             + G  + +   C S   + DLL+ +  +++MV   +  F  M   G  P V  CN ++
Sbjct: 92  NNVFGALMETYPFCNSNPAVFDLLIRVCLRENMVGDAVEAFRLMGFRGFSPSVFTCNMVL 151

Query: 216 KVLRDNGFSVKAREV------YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM 269
                 G  VK REV      ++ M    + P++ T+N +L++ C+ G+ + A  LL +M
Sbjct: 152 ------GSLVKDREVDLFWSFFKEMIANRVSPNVATFNILLNALCERGKFKSAGVLLRKM 205

Query: 270 QGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLL 329
              G  P  VTYN L+  + + G  + A  LI  M   G+     +YN +I     K   
Sbjct: 206 DETGHFPTAVTYNTLLNWYCKKGRYKAASELIDAMASKGIAADVCTYNVLIDDLCRKSRS 265

Query: 330 VEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTL 389
            +   +   M    V P   TYN LI GL K G++  A   F EM   N++P+ ++YNTL
Sbjct: 266 AKGYLILRRMRKNMVYPNEITYNTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTL 325

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY---------------------------- 421
           ++G+C +GNI EA  L D + S  L P  VTY                            
Sbjct: 326 IFGHCSNGNIEEALRLCDVMVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGV 385

Query: 422 -------NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG------------ 462
                   T+IDGLC+ G LE A QL ++M+   + PD++T++++VNG            
Sbjct: 386 RVGHISYTTMIDGLCKNGLLEEAVQLLDDMLKVSVSPDIVTFSVLVNGFLKTGLVPNRVL 445

Query: 463 -------SCKMGNLSMA-----------------------------------REFFNEML 480
                   CKMGNL  A                                     F + M 
Sbjct: 446 HSTLIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEAEYFVDHMS 505

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY-------------- 526
           R GL P    +   I      GD  +A+ + ++M + G  P   TY              
Sbjct: 506 RMGLAPSSVTFDCIIDTYGNSGDALKAFSVFDKMNSLGHLPSQFTYEGLLKGLLIGGHIN 565

Query: 527 ---------------------NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
                                N ++    + G+L  A  LL +MV + F+PD  TYTS+I
Sbjct: 566 EAKIFMHRPSSIPYAIGSTFYNTMLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLI 625

Query: 566 HASLEMGDLRRGRDLFNNMLRKGL-SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
                 G +     L    + KGL SP    YT L+      G  + A   F +M  +G+
Sbjct: 626 AGLCRKGKMVPALLLSGRAIEKGLLSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGV 685

Query: 625 RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
           +P+ I +N L++   R  ++ +   +   M    +  N  TY IL++            +
Sbjct: 686 QPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSK 745

Query: 685 LYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
           LY EM+     PD  T  +L+L          AV++L  +T+
Sbjct: 746 LYNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKITV 787



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 163/653 (24%), Positives = 296/653 (45%), Gaps = 77/653 (11%)

Query: 119  GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHG---ILDVLIGGGLSS-CVSIK 174
            GV+     + T+++ L ++GLL  A  +++ ++ V++        VL+ G L +  V  +
Sbjct: 384  GVRVGHISYTTMIDGLCKNGLLEEAVQLLDDMLKVSVSPDIVTFSVLVNGFLKTGLVPNR 443

Query: 175  IL-DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRM 233
            +L   L+  Y K   +++ L  +  M ++G + D    + ++      G   +A      
Sbjct: 444  VLHSTLIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEAEYFVDH 503

Query: 234  MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY------------ 281
            M   G+ PS VT++ ++D++   G+  +A  +  +M   G  P+  TY            
Sbjct: 504  MSRMGLAPSSVTFDCIIDTYGNSGDALKAFSVFDKMNSLGHLPSQFTYEGLLKGLLIGGH 563

Query: 282  -----------------------NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
                                   N ++T  SR+G L  A  L+ +M+       + +Y  
Sbjct: 564  INEAKIFMHRPSSIPYAIGSTFYNTMLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTS 623

Query: 319  IICGYSEKGLLVEALNLEEEMVTRGV-APTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            +I G   KG +V AL L    + +G+ +P  A Y  L+ GL K G    A + F +ML +
Sbjct: 624  LIAGLCRKGKMVPALLLSGRAIEKGLLSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNE 683

Query: 378  NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
             V PD I++N LL  Y R G + +   +   +RSR+L   + TYN L+ G  +   +   
Sbjct: 684  GVQPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMARC 743

Query: 438  QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
             +L   MI  G  PD +T+  ++ G CK G+L +A +F  ++  +G + D F     ++ 
Sbjct: 744  SKLYNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSK 803

Query: 498  ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
              +  +   A+ L +++   G  P++ TYN L +G  +  S +EA  +L  ++ +G+ P 
Sbjct: 804  LCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPT 863

Query: 558  HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS--------------------------- 590
               +T++I     MG+++   +L + M   G+S                           
Sbjct: 864  CKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRILG 923

Query: 591  --------PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
                    PT+ T+T L+H +   G +  A    S M+   ++ +V  YN LI+GLC   
Sbjct: 924  IMLEMQIIPTVATFTTLMHTYCKEGNVAKALELRSVMEQCHVKLDVAAYNVLISGLCADG 983

Query: 643  RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW-QEALRLYKEMLDREI 694
             I  A+ L+ +ME+  I PN   Y +LI+     GN+  E+ +L +++  RE+
Sbjct: 984  DIQAAFKLYEEMEQRDIWPNTSIYIVLIDSFLCTGNYIVESEKLLRDLRTREL 1036



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 115/422 (27%), Positives = 206/422 (48%), Gaps = 2/422 (0%)

Query: 241  PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGC-SPNGVTYNVLITGFSRNGELEQARG 299
            P   TY +++   C++G+M  AL L      +G  SPN   Y  L+ G  + G  + A  
Sbjct: 616  PDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLLSPNPAMYTSLVDGLLKEGHSKAALY 675

Query: 300  LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
            +  DML  G++  A ++N ++  YS KG + +  ++   M +R +   LATYNIL++G  
Sbjct: 676  MFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSLCFNLATYNILLHGYS 735

Query: 360  KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
            K   ++     + EM+     PD +++++L+ GYC+SG++  A     ++          
Sbjct: 736  KRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKVDCF 795

Query: 420  TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
            T N L+  LC   ++++A  L + +   G+ P+V TY  + NG  +  +   AR   + +
Sbjct: 796  TLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHAL 855

Query: 480  LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
            L  G  P    +TT I G  ++G+   A  LQ+EM   G     +  + ++ GL +    
Sbjct: 856  LENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLARSRKT 915

Query: 540  EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
            +EA  +L  M+    IP   T+T+++H   + G++ +  +L + M +  +   +  Y VL
Sbjct: 916  DEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNVAKALELRSVMEQCHVKLDVAAYNVL 975

Query: 600  IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING-LCRLRRIDQAYGLFIDMEEEG 658
            I    A G ++ AF  + EM+ + I PN   Y  LI+  LC    I ++  L  D+    
Sbjct: 976  ISGLCADGDIQAAFKLYEEMEQRDIWPNTSIYIVLIDSFLCTGNYIVESEKLLRDLRTRE 1035

Query: 659  IL 660
            ++
Sbjct: 1036 LM 1037


>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Brachypodium distachyon]
          Length = 676

 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 151/490 (30%), Positives = 241/490 (49%), Gaps = 17/490 (3%)

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML-KL 307
           M+ +F + G + EA ++++EM+  G      T N ++      G    AR +   M+ + 
Sbjct: 120 MVAAFAEAGRLPEAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVTRG 179

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           GL   A S+  +I G    G + E   L   M  +G     AT  +++   C+ GR  D 
Sbjct: 180 GLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDV 239

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
              F  ML     P++++Y   + G C+   + +AF + +E+ ++ L P V T+ +LI+G
Sbjct: 240 SELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLING 299

Query: 428 LCRYGDLEVAQQLKENMI-NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
           LC+ G  E A +L   +I +    P+V TYT+M+ G CK G L+ A      M+ +GL P
Sbjct: 300 LCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAP 359

Query: 487 DRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
           +   YTT I+G  K G  + A+ L  +M  +GF P++ TYN L+ GLCK G ++EA ++L
Sbjct: 360 NTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVL 419

Query: 547 RKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAAR 606
           R     G   D +TYT +I    + G +    DLFN M   G  P + TYT LI  +  +
Sbjct: 420 RMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQ 479

Query: 607 GRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
            ++E +   F +     + P   TY ++I G C++ +   A  +F  M + G   +  TY
Sbjct: 480 RQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITY 539

Query: 667 TILINENCNAGNWQEALRLYKEMLDREIEP----------DYCTH-----SALLLKQLDK 711
             LI+  C     +EA  LY+ MLD+ + P          +YC       +  +L +LDK
Sbjct: 540 GALISGLCKESRLEEARALYEGMLDKRLVPCEVTPVTLAFEYCRREKAVVAVSILDRLDK 599

Query: 712 DYKVHAVEYL 721
             K H V  L
Sbjct: 600 RRKNHTVNVL 609



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 142/518 (27%), Positives = 243/518 (46%), Gaps = 6/518 (1%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR-MMGEFGIKPSIVTYNT 248
           E   +VF +M  +GL   V+  N +++   D G    AR+V+  M+   G+ P   ++  
Sbjct: 132 EAADMVF-EMRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVTRGGLLPDARSFRA 190

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ++   C++G M+E   LL  MQG+G   +  T  V++  F + G       L R ML++G
Sbjct: 191 LIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSELFRRMLEMG 250

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
              +  +Y   I G  ++  + +A  + EEMV +G+ P + T+  LI GLCK G    A 
Sbjct: 251 TPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAF 310

Query: 369 HRFFEMLRKNVI-PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
             F ++++ +   P++ +Y  ++ GYC+ G +  A +L   +  + L P   TY TLI G
Sbjct: 311 RLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISG 370

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
            C+ G    A +L   M  +G  P++ TY  +++G CK G +  A +       +GLQ D
Sbjct: 371 HCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLD 430

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
           +  YT  I    K G  + A  L   M   G  PD+ TY  L+   C+   +EE+ +L  
Sbjct: 431 KVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFD 490

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
           K +    +P   TYTS+I    ++G       +F  M++ G     +TY  LI       
Sbjct: 491 KCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKES 550

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
           RLE A   +  M  K + P  +T   L    CR  +   A  +   +++       +T  
Sbjct: 551 RLEEARALYEGMLDKRLVPCEVTPVTLAFEYCRREKAVVAVSILDRLDKR---RKNHTVN 607

Query: 668 ILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +L+ +    G+ ++A    K+ LD ++  D   +++ +
Sbjct: 608 VLVRKLSAIGHVEDASLFLKKALDVDLAVDRLAYTSFI 645



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 135/470 (28%), Positives = 221/470 (47%), Gaps = 8/470 (1%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +E+   +   M   G   D   C  I++V    G      E++R M E G  P++V Y  
Sbjct: 201 MEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSELFRRMLEMGTPPNVVNYTA 260

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK-L 307
            +D  CK   +++A  +L EM  +G  PN  T+  LI G  + G  E+A  L   ++K  
Sbjct: 261 WIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSS 320

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
             K + H+Y  +I GY ++G L  A  L   MV +G+AP   TY  LI G CK G  + A
Sbjct: 321 SYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCA 380

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
                +M R+   P+I +YN L+ G C+ G I EA+ +     ++ L    VTY  +I  
Sbjct: 381 FELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITE 440

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
            C+ G +  A  L   M   G  PD+ TYT ++   C+   +  +++ F++ L   L P 
Sbjct: 441 HCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPT 500

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
           +  YT+ IAG  K+G ++ A R+ E M+  G   D ITY  L+ GLCK   LEEA  L  
Sbjct: 501 KQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYE 560

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
            M+    +P  +T  ++               + + + ++  + T+    VL+   +A G
Sbjct: 561 GMLDKRLVPCEVTPVTLAFEYCRREKAVVAVSILDRLDKRRKNHTV---NVLVRKLSAIG 617

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
            +E A ++  +     +  + + Y + IN        ++ Y L  ++ E+
Sbjct: 618 HVEDASLFLKKALDVDLAVDRLAYTSFINSC----YANKKYALATEISEK 663



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 209/448 (46%), Gaps = 43/448 (9%)

Query: 157 GILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK 216
            +L V+ G G   C+      +++ ++ +K        +F +ML  G  P+V N    I 
Sbjct: 206 ALLTVMQGQGF--CLDNATCTVIVRVFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWID 263

Query: 217 VLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM-QGRGCS 275
            L    +  +A  V   M   G+KP++ T+ ++++  CK G  + A  L  ++ +     
Sbjct: 264 GLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYK 323

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           PN  TY V+I G+ + G+L +A  L+  M++ GL  + ++Y  +I G+ ++G    A  L
Sbjct: 324 PNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFEL 383

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR----KNVIPDIISYNTLLY 391
             +M   G  P + TYN LI GLCK G++ +A    +++LR    + +  D ++Y  ++ 
Sbjct: 384 MNKMRREGFQPNIYTYNALIDGLCKKGKIQEA----YKVLRMANNQGLQLDKVTYTVMIT 439

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
            +C+ G+I  A  LF+ +      P + TY TLI   C+   +E +Q+L +  +   ++P
Sbjct: 440 EHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVP 499

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
              TYT M+ G CK+G  + A   F  M++ G Q D   Y   I+G  K     EA  L 
Sbjct: 500 TKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALY 559

Query: 512 EEMLAKGFPPDLI--------------------------------TYNVLVHGLCKLGSL 539
           E ML K   P  +                                T NVLV  L  +G +
Sbjct: 560 EGMLDKRLVPCEVTPVTLAFEYCRREKAVVAVSILDRLDKRRKNHTVNVLVRKLSAIGHV 619

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHA 567
           E+A+  L+K +      D + YTS I++
Sbjct: 620 EDASLFLKKALDVDLAVDRLAYTSFINS 647



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 16/189 (8%)

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           GSL  A+E +R+MV                A  E G L    D+   M   GL   + T 
Sbjct: 108 GSLPMAHEAMRRMVA---------------AFAEAGRLPEAADMVFEMRSHGLPFCVETA 152

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKG-IRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
             ++ A    G    A   F  M  +G + P+  ++ ALI G CR  R+++   L   M+
Sbjct: 153 NWVLRAGLDTGSFAYARKVFDGMVTRGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQ 212

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKV 715
            +G   +  T T+++   C  G +++   L++ ML+    P+   ++A +     + Y  
Sbjct: 213 GQGFCLDNATCTVIVRVFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVK 272

Query: 716 HAVEYLESL 724
            A   LE +
Sbjct: 273 QAFYVLEEM 281


>gi|15241491|ref|NP_196981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|9755745|emb|CAC01876.1| putative protein [Arabidopsis thaliana]
 gi|332004692|gb|AED92075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 938

 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 145/515 (28%), Positives = 262/515 (50%), Gaps = 4/515 (0%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
           F  +L +  +P+V     ++  L   G    A  +   M E  + P++VTY++M++ + K
Sbjct: 352 FKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVK 411

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
           +G ++EA+ LL +M+ +   PNG TY  +I G  + G+ E A  L ++M  +G++ + + 
Sbjct: 412 KGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYI 471

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
            + ++      G + E   L ++MV++GV      Y  LI    K G    A     EM 
Sbjct: 472 LDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQ 531

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
            + +  D++SYN L+ G  + G +G A   +  +R + + P + T+N +++   + GD E
Sbjct: 532 ERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSE 590

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
              +L + M + GI P +++  I+V   C+ G +  A    N+M+   + P+   Y   +
Sbjct: 591 GILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFL 650

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
               K       ++  E +L+ G       YN L+  LCKLG  ++A  ++  M   GFI
Sbjct: 651 DTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFI 710

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           PD +T+ S++H       +R+    ++ M+  G+SP + TY  +I   +  G ++    +
Sbjct: 711 PDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKW 770

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
            SEM+ +G+RP+  TYNALI+G  ++  +  +  ++ +M  +G++P   TY +LI+E  N
Sbjct: 771 LSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFAN 830

Query: 676 AGNWQEALRLYKEMLDREIEPD---YCTHSALLLK 707
            G   +A  L KEM  R + P+   YCT  + L K
Sbjct: 831 VGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCK 865



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 149/523 (28%), Positives = 260/523 (49%), Gaps = 33/523 (6%)

Query: 203 GLLPDVKNCNRIIKVLRDNGF-SVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQE 261
           G++PD +  N +I     NG    +   +Y  M   G+ P +   N ++ SFCK G +  
Sbjct: 88  GVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSF 147

Query: 262 ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC 321
           A+ LL   + R  S + VTYN +I+G   +G  ++A   + +M+K+G+     SYN +I 
Sbjct: 148 AISLL---RNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLID 204

Query: 322 GYSEKGLLVEALNLEEE----------------------------MVTRGVAPTLATYNI 353
           G+ + G  V A  L +E                            MV  G  P + T++ 
Sbjct: 205 GFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSS 264

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           +I  LCK G+V +      EM   +V P+ ++Y TL+    ++     A  L+ ++  R 
Sbjct: 265 IINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRG 324

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           +   +V Y  L+DGL + GDL  A++  + ++    +P+V+TYT +V+G CK G+LS A 
Sbjct: 325 IPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAE 384

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
               +ML K + P+   Y++ I G +K G   EA  L  +M  +   P+  TY  ++ GL
Sbjct: 385 FIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGL 444

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
            K G  E A EL ++M   G   ++    ++++    +G ++  + L  +M+ KG++   
Sbjct: 445 FKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQ 504

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
           + YT LI      G  E A  +  EMQ +G+  +V++YN LI+G+ +  ++   +  +  
Sbjct: 505 INYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWA-YKG 563

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
           M E+GI P+  T+ I++N     G+ +  L+L+ +M    I+P
Sbjct: 564 MREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKP 606



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 157/595 (26%), Positives = 275/595 (46%), Gaps = 72/595 (12%)

Query: 188 MVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR------------------- 228
           + ++     ++M++ G+LPD  + N +I      G  V+A+                   
Sbjct: 176 LADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLS 235

Query: 229 ---------EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGV 279
                    E YR M   G  P +VT++++++  CK G++ E   LL EM+     PN V
Sbjct: 236 SYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHV 295

Query: 280 TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
           TY  L+    +      A  L   M+  G+ V    Y  ++ G  + G L EA    + +
Sbjct: 296 TYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKML 355

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
           +     P + TY  L+ GLCK G +S A     +ML K+VIP++++Y++++ GY + G +
Sbjct: 356 LEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGML 415

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
            EA  L  ++  +N+VP   TY T+IDGL + G  E+A +L + M   G+  +      +
Sbjct: 416 EEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDAL 475

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           VN   ++G +   +    +M+ KG+  D+  YT+ I    K GD   A    EEM  +G 
Sbjct: 476 VNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGM 535

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
           P D+++YNVL+ G+ K G +  A+   + M   G  PD  T+  ++++  + GD      
Sbjct: 536 PWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILK 594

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT--------- 630
           L++ M   G+ P+L++  +++      G++E A    ++M +  I PN+ T         
Sbjct: 595 LWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSS 654

Query: 631 --------------------------YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
                                     YN LI  LC+L    +A  +  DME  G +P+  
Sbjct: 655 KHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTV 714

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL--------LLKQLDK 711
           T+  L++      + ++AL  Y  M++  I P+  T++ +        L+K++DK
Sbjct: 715 TFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDK 769



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 124/432 (28%), Positives = 211/432 (48%), Gaps = 34/432 (7%)

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNL-EEEMVTRGVAPTLATYNILIYGLCKWG 362
           M   G+   +  +N +I  ++  GL+ + ++L   +M+  GV+P +   N+LI+  CK G
Sbjct: 84  MCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVG 143

Query: 363 RVSDARHRFFEMLRKNVIP-DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           R+S A      +LR  VI  D ++YNT++ G C  G   EA+    E+    ++P  V+Y
Sbjct: 144 RLSFA----ISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSY 199

Query: 422 NTLIDGLCRYGDLEVAQQLKE----------------------------NMINQGILPDV 453
           NTLIDG C+ G+   A+ L +                            +M+  G  PDV
Sbjct: 200 NTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDV 259

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
           +T++ ++N  CK G +        EM    + P+   YTT +    K      A  L  +
Sbjct: 260 VTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQ 319

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           M+ +G P DL+ Y VL+ GL K G L EA +  + ++ D  +P+ +TYT+++    + GD
Sbjct: 320 MVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGD 379

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
           L     +   ML K + P +VTY+ +I+ +  +G LE A     +M+ + + PN  TY  
Sbjct: 380 LSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGT 439

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
           +I+GL +  + + A  L  +M   G+  N Y    L+N     G  +E   L K+M+ + 
Sbjct: 440 VIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKG 499

Query: 694 IEPDYCTHSALL 705
           +  D   +++L+
Sbjct: 500 VTLDQINYTSLI 511



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 135/540 (25%), Positives = 258/540 (47%), Gaps = 1/540 (0%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K ++    L ++++M+  G+  D+     ++  L   G   +A + ++M+ E    P++V
Sbjct: 306 KANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVV 365

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY  ++D  CK G++  A  ++ +M  +   PN VTY+ +I G+ + G LE+A  L+R M
Sbjct: 366 TYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKM 425

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
               +  +  +Y  +I G  + G    A+ L +EM   GV       + L+  L + GR+
Sbjct: 426 EDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRI 485

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            + +    +M+ K V  D I+Y +L+  + + G+   A    +E++ R +   VV+YN L
Sbjct: 486 KEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVL 545

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           I G+ ++G +  A    + M  +GI PD+ T+ IM+N   K G+     + +++M   G+
Sbjct: 546 ISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGI 604

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
           +P   +    +    + G   EA  +  +M+     P+L TY + +    K    +   +
Sbjct: 605 KPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFK 664

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
               ++  G       Y ++I    ++G  ++   +  +M  +G  P  VT+  L+H + 
Sbjct: 665 THETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYF 724

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
               +  A   +S M   GI PNV TYN +I GL     I +      +M+  G+ P+ +
Sbjct: 725 VGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDF 784

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           TY  LI+     GN + ++ +Y EM+   + P   T++ L+ +  +    + A E L+ +
Sbjct: 785 TYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEM 844



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 127/542 (23%), Positives = 237/542 (43%), Gaps = 47/542 (8%)

Query: 194 LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
            +  +ML   ++P+V   + +I      G   +A  + R M +  + P+  TY T++D  
Sbjct: 385 FIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGL 444

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
            K G+ + A+EL  EM+  G   N    + L+    R G +++ +GL++DM+  G+ +  
Sbjct: 445 FKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQ 504

Query: 314 HSYNPIICGY----------------SEKGLLVEALNLE------------------EEM 339
            +Y  +I  +                 E+G+  + ++                    + M
Sbjct: 505 INYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGM 564

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
             +G+ P +AT+NI++    K G        + +M    + P ++S N ++   C +G +
Sbjct: 565 REKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKM 624

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
            EA  + +++    + P + TY   +D   ++   +   +  E +++ GI      Y  +
Sbjct: 625 EEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTL 684

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           +   CK+G    A     +M  +G  PD   + + + G        +A      M+  G 
Sbjct: 685 IATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGI 744

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
            P++ TYN ++ GL   G ++E ++ L +M   G  PD  TY ++I    ++G+++    
Sbjct: 745 SPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMT 804

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
           ++  M+  GL P   TY VLI   A  G++  A     EM  +G+ PN  TY  +I+GLC
Sbjct: 805 IYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLC 864

Query: 640 RL------------RRIDQAYGLFIDM-EEEGILPNKYTYTILINENCNAGNWQEALRLY 686
           +L              + +A GL  +M EE+G +P   T   +       G   +A R  
Sbjct: 865 KLCTHPDVEWNKKAMYLAEAKGLLKEMVEEKGYIPCNQTIYWISAAFSKPGMKVDAERFL 924

Query: 687 KE 688
           KE
Sbjct: 925 KE 926



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 182/363 (50%), Gaps = 11/363 (3%)

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI-GEAFLLFDELRSRNLVPTVVTY 421
           R+  A      M    V+PD   +N+L++ +  +G +  +  L++ ++ +  + P V   
Sbjct: 73  RLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFAL 132

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           N LI   C+ G L  A  L  N +   I  D +TY  +++G C+ G    A +F +EM++
Sbjct: 133 NVLIHSFCKVGRLSFAISLLRNRV---ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVK 189

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
            G+ PD  +Y T I G  K+G+   A  L +E+       +LIT+ +L+     L ++EE
Sbjct: 190 MGILPDTVSYNTLIDGFCKVGNFVRAKALVDEI----SELNLITHTILLSSYYNLHAIEE 245

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A    R MV  GF PD +T++SII+   + G +  G  L   M    + P  VTYT L+ 
Sbjct: 246 A---YRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVD 302

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
           +         A   +S+M V+GI  +++ Y  L++GL +   + +A   F  + E+  +P
Sbjct: 303 SLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVP 362

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYL 721
           N  TYT L++  C AG+   A  +  +ML++ + P+  T+S+++   + K     AV  L
Sbjct: 363 NVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLL 422

Query: 722 ESL 724
             +
Sbjct: 423 RKM 425


>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 141/455 (30%), Positives = 238/455 (52%), Gaps = 15/455 (3%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           GIKP+IV+ + +++ +C  G+M+ A  +  ++   G  PN +T   L+ GF  N ++++A
Sbjct: 101 GIKPNIVSLSILINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEA 160

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
                 +L LG   +  SY  +I G  + G    AL +  ++  + V+  +  Y+ +I G
Sbjct: 161 LHFHDHVLALGFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDG 220

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           LCK   V+DA   + EM+ K + P +++ N+L+YGYC  G   EAF L  E+  +N+ P 
Sbjct: 221 LCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPD 280

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           V T+N L+D LC+ G ++ A+     M+ +G++PDV+TY+ +++G C +  ++ A+    
Sbjct: 281 VYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKH--- 337

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
                        Y+  I G  K+    +A  L  EM  +   PD +TYN L+ GLCK G
Sbjct: 338 ------------VYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSG 385

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            +  A EL+ +M   G   D ITY S+I A  +   + +   L   +  +G+   + TY 
Sbjct: 386 RISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYN 445

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           +LI     +GRL+ A + F ++ +KG    V TY  +INGLC    +++A  L   ME+ 
Sbjct: 446 ILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDN 505

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
           G +P+  T   +I         + A +L +EM+ R
Sbjct: 506 GCVPDAVTCETIIRALFENDKNERAEKLLREMIAR 540



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 130/484 (26%), Positives = 237/484 (48%), Gaps = 15/484 (3%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PS++ +  +L S  K       + L ++++  G  PN V+ ++LI  +   G++  A  +
Sbjct: 69  PSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFSI 128

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
              +LK+G   +  +   ++ G+     + EAL+  + ++  G      +Y  LI GLCK
Sbjct: 129 FAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCK 188

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G    A     ++  K V  D++ Y+T++ G C+   + +A+ L+ E+ ++ + PTVVT
Sbjct: 189 IGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVT 248

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
            N+LI G C  G  + A  L   M+ + I PDV T+ I+V+  CK G +  A+     M+
Sbjct: 249 LNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMM 308

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           ++G+ PD   Y++ + G   + + ++A  +               Y+++++G CK+  ++
Sbjct: 309 KEGVMPDVVTYSSLMDGYCLVNEVNKAKHV---------------YSIVINGFCKIKMVD 353

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           +A  L  +M      PD +TY S+I    + G +    +L + M   G    ++TY  LI
Sbjct: 354 KALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLI 413

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
            A      ++ A     +++ +GI+ ++ TYN LI+GLC+  R+  A  +F D+  +G  
Sbjct: 414 DALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYN 473

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
              +TYTI+IN  C  G   EA  L  +M D    PD  T   ++    + D    A + 
Sbjct: 474 LTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRALFENDKNERAEKL 533

Query: 721 LESL 724
           L  +
Sbjct: 534 LREM 537



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 169/363 (46%), Gaps = 20/363 (5%)

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            V D    F  ML  N  P +I +  +L    +  +      LF +L    + P +V+ +
Sbjct: 51  HVDDLVSSFHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLS 110

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            LI+  C  G +  A  +   ++  G  P+ IT T +V G C    +  A  F + +L  
Sbjct: 111 ILINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLAL 170

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G   ++ +Y T I G  K+G+T  A ++  ++  K    D++ Y+ ++ GLCK   + +A
Sbjct: 171 GFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDA 230

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            EL  +M+     P  +T  S+I+    +G  +    L   M+ K ++P + T+ +L+ A
Sbjct: 231 YELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDA 290

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNAL--------------------INGLCRLR 642
               G+++ A    + M  +G+ P+V+TY++L                    ING C+++
Sbjct: 291 LCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIK 350

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
            +D+A  LF +M    I P+  TY  LI+  C +G    A  L  EM D     D  T++
Sbjct: 351 MVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYN 410

Query: 703 ALL 705
           +L+
Sbjct: 411 SLI 413



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 177/378 (46%), Gaps = 36/378 (9%)

Query: 93  LVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVC 152
           L+  L +I E  R AL+  R +E +  V  D  ++ TI++ L +  L+  AY +   ++ 
Sbjct: 182 LINGLCKIGE-TRAALQMLRQIEGKL-VSTDVVMYSTIIDGLCKDKLVNDAYELYSEMIT 239

Query: 153 VNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCN 212
             +                ++  L+ L+  Y      ++   +  +M+   + PDV   N
Sbjct: 240 KRISP--------------TVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFN 285

Query: 213 RIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLD--------------------S 252
            ++  L   G   +A+    +M + G+ P +VTY++++D                     
Sbjct: 286 ILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVING 345

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
           FCK   + +AL L +EM+ R  +P+ VTYN LI G  ++G +  A  L+ +M   G    
Sbjct: 346 FCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPAD 405

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
             +YN +I    +   + +A+ L +++  +G+   + TYNILI GLCK GR+ DA+  F 
Sbjct: 406 IITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQ 465

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
           ++L K     + +Y  ++ G C  G + EA  L  ++     VP  VT  T+I  L    
Sbjct: 466 DLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRALFEND 525

Query: 433 DLEVAQQLKENMINQGIL 450
             E A++L   MI +G+L
Sbjct: 526 KNERAEKLLREMIARGLL 543


>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
          Length = 667

 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 151/526 (28%), Positives = 254/526 (48%), Gaps = 25/526 (4%)

Query: 199 MLRNGLLPDVKNCNR-IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG 257
           M+R+G  PD    N  I+   R N   V AR+++  M   G    +V+Y T+++  C+ G
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDV-ARDLFDKMPLRGFAQDVVSYATLIEGLCEAG 59

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
            + EA+EL  EM      P+   Y  L+ G       E+   ++R M +LG + S  +Y 
Sbjct: 60  RIDEAVELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYA 115

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR- 376
            ++     +    EA  + +EM  +G+AP + T   +I   CK GR+SDA  R  E+++ 
Sbjct: 116 AVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDAL-RVLELMKL 174

Query: 377 KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
           +   P++ +YN L+ G+C  G + +A  L +++R+  + P  VTYN LI G C  G +E 
Sbjct: 175 RGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIES 234

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
           A +L   M   G++ D  TY  ++N  CK G    A   F+ +  +G++P+   + + I 
Sbjct: 235 AFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLIN 294

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
           G  K G    A++  E+M++ G  PD  TY+  +  LCK+   +E    + +M+     P
Sbjct: 295 GLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKP 354

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
             + YT +IH  L+  +       +  M+  G +P +VTYT  + A+   GRL  A    
Sbjct: 355 STVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVL 414

Query: 617 SEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN- 675
            EM   G+  + + YN L++G   + + D A  +   M     +PN++TY IL+      
Sbjct: 415 MEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRM 474

Query: 676 -----------AGNWQ-----EALRLYKEMLDREIEPDYCTHSALL 705
                      AG W+     +   L+  M   E  P+  T+S++L
Sbjct: 475 RLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSIL 520



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 137/495 (27%), Positives = 231/495 (46%), Gaps = 19/495 (3%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +  +M   GL P V  C  +I      G    A  V  +M   G KP++ TYN ++  FC
Sbjct: 133 MLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFC 192

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
            EG++ +A+ LL +M+  G +P+ VTYN+LI G   +G +E A  L+R M   GL    +
Sbjct: 193 NEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQY 252

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE- 373
           +YN +I    + G   +A +L + + TRG+ P   T+N LI GLCK G+ +D   +F E 
Sbjct: 253 TYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGK-ADIAWKFLEK 311

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M+     PD  +Y++ +   C+     E      E+  +++ P+ V Y  +I  L +  +
Sbjct: 312 MVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERN 371

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
             +  +    M++ G  PDV+TYT  +   C  G L+ A     EM + G+  D  AY T
Sbjct: 372 YGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNT 431

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH-----------------GLCKL 536
            + G   +G T  A  + ++M +    P+  TY +L+                  G+ K 
Sbjct: 432 LMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKA 491

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
             L +   L   M  + F+P+  TY+SI+    E G       L + M    +S     Y
Sbjct: 492 IELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIY 551

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
           T L+       R   A++    M   G  P +++Y  L++GL    + D+A  +F++   
Sbjct: 552 TALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRW 611

Query: 657 EGILPNKYTYTILIN 671
           +   P++  + ++I+
Sbjct: 612 KDYSPDEIVWKVIID 626



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 129/390 (33%), Positives = 184/390 (47%), Gaps = 5/390 (1%)

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
           MV  G  P   T+N LI G C+  +V  AR  F +M  +    D++SY TL+ G C +G 
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           I EA  LF E+      P +  Y  L+ GLC     E    +   M   G  P    Y  
Sbjct: 61  IDEAVELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           +V+  C+      A E   EM  KGL P     T  I    K G  S+A R+ E M  +G
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
             P++ TYN LV G C  G + +A  LL KM   G  PD +TY  +I      G +    
Sbjct: 177 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 236

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
            L   M   GL     TY  LI+A    GR + A   F  ++ +GI+PN +T+N+LINGL
Sbjct: 237 RLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGL 296

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
           C+  + D A+     M   G  P+ YTY+  I   C     QE L    EML ++++P  
Sbjct: 297 CKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPST 356

Query: 699 CTHSALLLKQL-DKDYKVHAVEYLESLTLG 727
             ++ ++ K L +++Y + A  + E ++ G
Sbjct: 357 VNYTIVIHKLLKERNYGLVARTWGEMVSSG 386



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 135/532 (25%), Positives = 228/532 (42%), Gaps = 19/532 (3%)

Query: 158 ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
           +L  +   GL+ CV       ++  Y K+  +   L V   M   G  P+V   N +++ 
Sbjct: 133 MLQEMFEKGLAPCVVT--CTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQG 190

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
             + G   KA  +   M   G+ P  VTYN ++   C +G ++ A  LL  M+G G   +
Sbjct: 191 FCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIAD 250

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
             TYN LI    ++G  +QA  L   +   G+K +A ++N +I G  + G    A    E
Sbjct: 251 QYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLE 310

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
           +MV+ G  P   TY+  I  LCK     +      EML+K+V P  ++Y  +++   +  
Sbjct: 311 KMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKER 370

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
           N G     + E+ S    P VVTY T +   C  G L  A+ +   M   G+  D + Y 
Sbjct: 371 NYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYN 430

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI-----------------AGELK 500
            +++G   +G    A     +M      P++F Y   +                 AG  K
Sbjct: 431 TLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWK 490

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
             + ++ + L + M    F P+  TY+ ++ G  + G  EEA  L+  M  D    +   
Sbjct: 491 AIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDI 550

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           YT+++    +         L  +M++ G  P L++Y  L+      G+ + A   F   +
Sbjct: 551 YTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSR 610

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
            K   P+ I +  +I+GL +    D +  + I +E     P+  TY +L  E
Sbjct: 611 WKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEE 662


>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
 gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
          Length = 802

 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 153/521 (29%), Positives = 246/521 (47%), Gaps = 22/521 (4%)

Query: 207 DVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELL 266
           D   C ++I  L +     +A      M      P++VTY T+L  F K+ ++     ++
Sbjct: 106 DTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKRII 165

Query: 267 WEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII---CGY 323
             M   GC+PN   +N L+  +    +   A  L++ M   G      +YN  I   CG 
Sbjct: 166 NMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGG 225

Query: 324 SE---KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
            E     LL  A  + EEM+                 LC  G+   A      M+ K  +
Sbjct: 226 EELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFV 285

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           PD  +Y+ ++   C +  + +AFLLF E++S  + P V TY  LID  C+ G +E A+  
Sbjct: 286 PDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSW 345

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
            + M + G   +V+TYT +++   K   L  A + FN M+  G  P+   Y+  + G  K
Sbjct: 346 FDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCK 405

Query: 501 LGDTSEAYRLQEEMLA----------------KGFPPDLITYNVLVHGLCKLGSLEEANE 544
            G+  +A  +  +++                     P+++TY  L+ GLCK   + +A E
Sbjct: 406 AGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQE 465

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           LL  M+ +G  P+HI Y ++I    ++G +   +++F  M + G  PT+ TYT LI A  
Sbjct: 466 LLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMF 525

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
              RL+LA    S+M      PNV+TY A+I+GLCR+    +A  L   MEE+G  PN  
Sbjct: 526 KDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVV 585

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           TYT LI+    +G    +L+L+ +M  +   P+Y T+  L+
Sbjct: 586 TYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLI 626



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 166/636 (26%), Positives = 283/636 (44%), Gaps = 66/636 (10%)

Query: 112 RWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCV 171
           RW +    ++R++F   T+L   + SGL+ ++ +             +  L     +SC+
Sbjct: 90  RWSDALVMIEREDFKLDTVLCTQMISGLMEASLF----------DEAISFLHRMRCNSCI 139

Query: 172 -SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV 230
            ++     LL  + KK  +  C  + N M++ G  P+    N ++    +      A ++
Sbjct: 140 PNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKL 199

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQE------ALELLWEMQGRGCSPNGVTYNVL 284
            + M + G  P  V YN  + S C   E+        A ++  EM    C  N V     
Sbjct: 200 LKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANF 259

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
                  G+ + A  +I+ M+  G      +Y+ +I    E   + +A  L +EM + GV
Sbjct: 260 ARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGV 319

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
            P + TY ILI   CK G +  AR  F EM       ++++Y  LL+ Y ++  + +A  
Sbjct: 320 NPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASD 379

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI----------------NQG 448
           +F+ +      P  +TY+ L+DGLC+ G+++ A ++   +I                   
Sbjct: 380 IFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDS 439

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
           I P+V+TY  +++G CK   +  A+E  + ML  G +P+   Y   I G  K+G    A 
Sbjct: 440 IAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQ 499

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
            +   M   G+ P + TY  L+  + K   L+ A ++L +MV     P+ +TYT++I   
Sbjct: 500 EVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGL 559

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
             +G+ ++   L + M  KG SP +VTYT LI      G+++L+   F +M  KG  PN 
Sbjct: 560 CRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNY 619

Query: 629 ITYNALINGLCRLRRIDQAY---------------------------------GLFIDME 655
           +TY  LIN  C    +D+A+                                 GL  ++E
Sbjct: 620 VTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLGLLEELE 679

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
             G +P    Y +LI+    AG  +EAL L+KEM++
Sbjct: 680 SHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMME 715



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 148/520 (28%), Positives = 250/520 (48%), Gaps = 23/520 (4%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +   M+  G +PD    +++I  L +     KA  +++ M   G+ P + TY  ++DSFC
Sbjct: 275 IIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFC 334

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K G +++A     EM+  GCS N VTY  L+  + +  +L QA  +   M+  G   +  
Sbjct: 335 KAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTI 394

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMV----------------TRGVAPTLATYNILIYGL 358
           +Y+ ++ G  + G + +A  +  +++                T  +AP + TY  LI GL
Sbjct: 395 TYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGL 454

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           CK  +V DA+     ML     P+ I Y+ L+ G+C+ G I  A  +F  +     +PTV
Sbjct: 455 CKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTV 514

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
            TY +LID + +   L++A ++   M+     P+V+TYT M++G C++G    A +  + 
Sbjct: 515 HTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSM 574

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M  KG  P+   YT  I G  K G    + +L  +M  KG  P+ +TY VL++  C  G 
Sbjct: 575 MEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGL 634

Query: 539 LEEANELLRKMVGDGFIPDHIT-YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
           L+EA+ LL +M    + P ++  Y S++    +      G  L   +   G  P    Y 
Sbjct: 635 LDEAHSLLSEM-KQTYWPKYLQGYCSVVQGFSKKFIASLG--LLEELESHGTVPIAPVYG 691

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT---YNALINGLCRLRRIDQAYGLFIDM 654
           +LI   +  GRLE A     EM       N+ +   Y +LI  LC   ++++A+ L+ ++
Sbjct: 692 LLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEI 751

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
             +G++P    +  LI        W EAL+L   + D  +
Sbjct: 752 TRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSICDEGV 791



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 127/495 (25%), Positives = 209/495 (42%), Gaps = 27/495 (5%)

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           + +FG +PS  TYN ++      G+M     +  EM   G   +  T         + G 
Sbjct: 31  LKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGR 90

Query: 294 LEQARGLI-RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
              A  +I R+  KL   +       +I G  E  L  EA++    M      P + TY 
Sbjct: 91  WSDALVMIEREDFKLDTVLCTQ----MISGLMEASLFDEAISFLHRMRCNSCIPNVVTYR 146

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
            L+ G  K  ++   +     M+++   P+   +N+L++ YC + +   A+ L   +   
Sbjct: 147 TLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADC 206

Query: 413 NLVPTVVTYNTLIDGLCRYGD------LEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
              P  V YN  I  +C   +      L +A+++ E M+    + + +         C M
Sbjct: 207 GCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGM 266

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G   MA +    M+ KG  PD   Y+  I    +     +A+ L +EM + G  PD+ TY
Sbjct: 267 GKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTY 326

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
            +L+   CK G +E+A     +M   G   + +TYT+++HA L+   L +  D+FN M+ 
Sbjct: 327 TILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMID 386

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAF----------------MYFSEMQVKGIRPNVIT 630
            G  P  +TY+ L+      G ++ A                  YF       I PNV+T
Sbjct: 387 AGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVT 446

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           Y ALI+GLC+  ++  A  L   M   G  PN   Y  LI+  C  G    A  ++  M 
Sbjct: 447 YGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMS 506

Query: 691 DREIEPDYCTHSALL 705
                P   T+++L+
Sbjct: 507 KCGYLPTVHTYTSLI 521



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 115/440 (26%), Positives = 195/440 (44%), Gaps = 25/440 (5%)

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
            G + S  +YN ++   +  G +     +++EM   G      T       LCK GR SD
Sbjct: 34  FGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWSD 93

Query: 367 ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
           A      + R++   D +    ++ G   +    EA      +R  + +P VVTY TL+ 
Sbjct: 94  A---LVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLT 150

Query: 427 GLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
           G  +   L   +++   M+ +G  P+   +  +V+  C   +   A +    M   G  P
Sbjct: 151 GFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPP 210

Query: 487 DRFAYTTQIAG-----ELKLGD-TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
              AY   I       EL   D  + A ++ EEMLA     + +        LC +G  +
Sbjct: 211 GYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFD 270

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
            A ++++ M+G GF+PD  TY+ +I    E   + +   LF  M   G++P + TYT+LI
Sbjct: 271 MAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILI 330

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
            +    G +E A  +F EM+  G   NV+TY AL++   + +++ QA  +F  M + G  
Sbjct: 331 DSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCP 390

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDR----------------EIEPDYCTHSAL 704
           PN  TY+ L++  C AG  Q+A  +Y +++                   I P+  T+ AL
Sbjct: 391 PNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGAL 450

Query: 705 LLKQLDKDYKVHAVEYLESL 724
           +         V A E L+++
Sbjct: 451 IDGLCKAHKVVDAQELLDAM 470



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 135/529 (25%), Positives = 230/529 (43%), Gaps = 40/529 (7%)

Query: 84  QAVVSDPELLVRVLNRIREKPRIALRFFRWVETQP-GVKRDEFVFCTILEILIESGLLRS 142
           +  V D     +V+  + E  ++   F  + E +  GV  D + +  +++   ++GL+  
Sbjct: 282 KGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQ 341

Query: 143 A-YWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLR 201
           A  W  E      M  I       G S+  ++     LL  Y K   + Q   +FN+M+ 
Sbjct: 342 ARSWFDE------MRSI-------GCSA--NVVTYTALLHAYLKAKQLPQASDIFNRMID 386

Query: 202 NGLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMG-------EF--------GIKPSIVT 245
            G  P+    + ++  L   G   KA EVY +++G       +F         I P++VT
Sbjct: 387 AGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVT 446

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           Y  ++D  CK  ++ +A ELL  M   GC PN + Y+ LI GF + G+++ A+ +   M 
Sbjct: 447 YGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMS 506

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
           K G   + H+Y  +I    +   L  A+ +  +MV     P + TY  +I GLC+ G   
Sbjct: 507 KCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQ 566

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
            A      M  K   P++++Y  L+ G  +SG +  +  LF ++ ++   P  VTY  LI
Sbjct: 567 KALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLI 626

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVIT-YTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           +  C  G L+ A  L   M  Q   P  +  Y  +V G  K    S+      E+   G 
Sbjct: 627 NHCCAAGLLDEAHSLLSEM-KQTYWPKYLQGYCSVVQGFSKKFIASLG--LLEELESHGT 683

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT---YNVLVHGLCKLGSLEE 541
            P    Y   I    K G   EA  L +EM+      ++ +   Y  L+  LC    LE+
Sbjct: 684 VPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEK 743

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
           A EL  ++   G +P+   +  +I   +++        L  ++  +G++
Sbjct: 744 AFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSICDEGVN 792



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 136/339 (40%), Gaps = 44/339 (12%)

Query: 408 ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG 467
           EL+     P+  TYN L+  L   G +++  ++++ M   G   D  T        CK G
Sbjct: 30  ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
             S A        R+  + D    T  I+G ++     EA      M      P+++TY 
Sbjct: 90  RWSDALVMIE---REDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYR 146

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
            L+ G  K   L     ++  M+ +G  P+   + S++H+     D      L   M   
Sbjct: 147 TLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADC 206

Query: 588 GLSPTLVTYTVLI------------------------------------HAHAAR----- 606
           G  P  V Y + I                                     A+ AR     
Sbjct: 207 GCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGM 266

Query: 607 GRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
           G+ ++AF     M  KG  P+  TY+ +I  LC   ++++A+ LF +M+  G+ P+ YTY
Sbjct: 267 GKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTY 326

Query: 667 TILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           TILI+  C AG  ++A   + EM       +  T++ALL
Sbjct: 327 TILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALL 365



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/218 (24%), Positives = 89/218 (40%), Gaps = 3/218 (1%)

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
           R A T  +   L+   +S ++    E+   G+ P   TYN LV  L   G ++    + +
Sbjct: 5   RVAATAALRSSLRRACSSSSHTADPELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQK 64

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
           +M   GF  D  T      A  + G   R  D    + R+      V  T +I       
Sbjct: 65  EMSESGFCMDKFTVGCFAQALCKEG---RWSDALVMIEREDFKLDTVLCTQMISGLMEAS 121

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
             + A  +   M+     PNV+TY  L+ G  + +++     +   M +EG  PN   + 
Sbjct: 122 LFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFN 181

Query: 668 ILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            L++  CNA ++  A +L K M D    P Y  ++  +
Sbjct: 182 SLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFI 219


>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
          Length = 676

 Score =  238 bits (607), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 146/474 (30%), Positives = 234/474 (49%), Gaps = 4/474 (0%)

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYN-VLITGFSRNGELEQARGLIRDMLKL--GLKV 311
           + G ++EA ++L E++  G      T N VL  G    G    AR     M +   G++ 
Sbjct: 120 EAGRLREAADMLLELRSHGLPLVVETANWVLRVGLRHPGCFAHAREAFDGMARAAGGVRP 179

Query: 312 SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRF 371
              S+  ++ G   +G   EA  L   M  +G     AT  +++   C+ GR  +    F
Sbjct: 180 DHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLF 239

Query: 372 FEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY 431
             M      P++++Y+  + G C  G + +AF + +E+  + L P V T+ +LIDGLC+ 
Sbjct: 240 RRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKI 299

Query: 432 GDLEVAQQLKENMI-NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
           G +E A +L   ++ +    P+V TYT+M+ G CK G L+ A      M+ +GL P+   
Sbjct: 300 GWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNT 359

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           YTT I G  K G    A+ L  +M  +GF P++ TYN ++ G CK G ++EA ++LR   
Sbjct: 360 YTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMAT 419

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
             G   D +TYT +I    + G +    DLF  M  K   P + TYT +I  +  + ++E
Sbjct: 420 SQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQME 479

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
            +   F +    G+ P   TY ++I G CRL ++  A  +F  M + G LP+  TY  LI
Sbjct: 480 QSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALI 539

Query: 671 NENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           +  C     +EA  L++ MLD+ + P   T   L  +   +D    AV +L+ L
Sbjct: 540 SSLCKESRLEEARALFETMLDKHLVPCDVTRVTLAYEYCRRDKITIAVSFLDRL 593



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 146/508 (28%), Positives = 242/508 (47%), Gaps = 7/508 (1%)

Query: 202 NGLLPDVKNCNRIIKV-LRDNGFSVKAREVYRMMGEF--GIKPSIVTYNTMLDSFCKEGE 258
           +GL   V+  N +++V LR  G    ARE +  M     G++P   ++  ++   C+EG 
Sbjct: 137 HGLPLVVETANWVLRVGLRHPGCFAHAREAFDGMARAAGGVRPDHRSFRALVLGCCREGR 196

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
            +EA  LL  M  +G   +  T  V++  F R G       L R M ++G   +  +Y+ 
Sbjct: 197 FEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRRMSEMGTPPNMVNYSA 256

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
            I G  E+G + +A ++ EEMV +G+ P + T+  LI GLCK G +  A   F ++++ +
Sbjct: 257 WIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSS 316

Query: 379 VI-PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
              P++ +Y  ++ GYC+ G +  A +L   +  + L P   TY TLI G C+ G  + A
Sbjct: 317 SYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRA 376

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
            +L   M  +G LP++ TY  ++ G CK G +  A +       +GL  D+  YT  I  
Sbjct: 377 FELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITE 436

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
             K G  + A  L ++M  K   PD+ TY  ++   C+   +E++ +L  K +  G +P 
Sbjct: 437 HCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPT 496

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
             TYTS+I     +G L     +F  M++ G  P  +TY  LI +     RLE A   F 
Sbjct: 497 KQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKESRLEEARALFE 556

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
            M  K + P  +T   L    CR  +I  A      +++       +T   L+ +    G
Sbjct: 557 TMLDKHLVPCDVTRVTLAYEYCRRDKITIAVSFLDRLDKR---QQAHTADALVRKLSTVG 613

Query: 678 NWQEALRLYKEMLDREIEPDYCTHSALL 705
           N   A    K +LD+    D+ T+++ +
Sbjct: 614 NLDAASLFLKNVLDKHYAVDHATYTSFI 641



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 143/501 (28%), Positives = 229/501 (45%), Gaps = 40/501 (7%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+L   ++   E+   +   M   G   D   C  +++     G      +++R M E G
Sbjct: 187 LVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRRMSEMG 246

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
             P++V Y+  +D  C+ G +++A  +L EM G+G  PN  T+  LI G  + G +E+A 
Sbjct: 247 TPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAF 306

Query: 299 GLIRDMLK-LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
            L   ++K    K + H+Y  +I GY ++G L  A  L   MV +G+AP   TY  LI+G
Sbjct: 307 RLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHG 366

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
            CK G    A     +M  +  +P+I +YN ++ G+C+ G I EA+ +     S+ L   
Sbjct: 367 HCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLD 426

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
            VTY  LI   C+ G +  A  L + M  +   PD+ TYT ++   C+   +  +++ F+
Sbjct: 427 KVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFD 486

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           + L  GL P +  YT+ IAG  +LG  + A ++ E M+  G  PD ITY  L+  LCK  
Sbjct: 487 KCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKES 546

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            LEEA  L                                   F  ML K L P  VT  
Sbjct: 547 RLEEARAL-----------------------------------FETMLDKHLVPCDVTRV 571

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
            L + +  R ++ +A  +   +     R    T +AL+  L  +  +D A     ++ ++
Sbjct: 572 TLAYEYCRRDKITIAVSFLDRLDK---RQQAHTADALVRKLSTVGNLDAASLFLKNVLDK 628

Query: 658 GILPNKYTYTILINENCNAGN 678
               +  TYT  IN +C   N
Sbjct: 629 HYAVDHATYTSFIN-SCYESN 648



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 126/442 (28%), Positives = 203/442 (45%), Gaps = 49/442 (11%)

Query: 170 CVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE 229
           C+      +++  + ++        +F +M   G  P++ N +  I  L + G+  +A  
Sbjct: 213 CLDSATCTVVVRAFCRQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFH 272

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM-QGRGCSPNGVTYNVLITGF 288
           V   M   G+KP++ T+ +++D  CK G M+ A  L  ++ +     PN  TY V+I G+
Sbjct: 273 VLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGY 332

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
            + G+L +A  L+  M++ GL  + ++Y  +I G+ + G    A  L  +M   G  P +
Sbjct: 333 CKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNI 392

Query: 349 ATYNILIYGLCKWGRVSDARH-----------------------------------RFFE 373
            TYN +I G CK G++ +A                                      F +
Sbjct: 393 YTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQ 452

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M  K+  PDI +Y T++  YC+   + ++  LFD+  S  LVPT  TY ++I G CR G 
Sbjct: 453 MAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGK 512

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           L  A ++ E M+  G LPD ITY  +++  CK   L  AR  F  ML K L P      T
Sbjct: 513 LTSALKVFERMVQHGCLPDSITYGALISSLCKESRLEEARALFETMLDKHLVPCDVTRVT 572

Query: 494 QIAGELKLGD-----TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
            +A E    D      S   RL +   A        T + LV  L  +G+L+ A+  L+ 
Sbjct: 573 -LAYEYCRRDKITIAVSFLDRLDKRQQAH-------TADALVRKLSTVGNLDAASLFLKN 624

Query: 549 MVGDGFIPDHITYTSIIHASLE 570
           ++   +  DH TYTS I++  E
Sbjct: 625 VLDKHYAVDHATYTSFINSCYE 646



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 90/300 (30%), Positives = 143/300 (47%), Gaps = 3/300 (1%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K    ++   + NKM   G LP++   N II      G   +A +V RM    G+   
Sbjct: 367 HCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLD 426

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            VTY  ++   CK+G +  AL+L  +M  + C P+  TY  +I  + +  ++EQ++ L  
Sbjct: 427 KVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFD 486

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
             L +GL  +  +Y  +I GY   G L  AL + E MV  G  P   TY  LI  LCK  
Sbjct: 487 KCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKES 546

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R+ +AR  F  ML K+++P  ++  TL Y YCR   I  A    D L  R    T    +
Sbjct: 547 RLEEARALFETMLDKHLVPCDVTRVTLAYEYCRRDKITIAVSFLDRLDKRQQAHTA---D 603

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            L+  L   G+L+ A    +N++++    D  TYT  +N   +    ++A E   ++ ++
Sbjct: 604 ALVRKLSTVGNLDAASLFLKNVLDKHYAVDHATYTSFINSCYESNRYALASEISEKISKR 663


>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
          Length = 1023

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 159/582 (27%), Positives = 268/582 (46%), Gaps = 40/582 (6%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMH----GILDVLIGGGLSSCVSIK 174
           G K     +C +  IL  + +   A  ++  +V          + DVL            
Sbjct: 5   GFKHTIESYCIVAHILFCARMYYDANRILREMVLSKAELKDCDVFDVLWSTRNVCVPGFG 64

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           + D L  +  ++ M E+ L  F+KM R  + P  ++CN                      
Sbjct: 65  VFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCN---------------------- 102

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
                         +L  F + G+         +M G G  P   TYN++I    + G++
Sbjct: 103 -------------GLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDI 149

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           E A GL  +M   GL     +YN +I GY + G L + +   EEM +    P + TYN L
Sbjct: 150 EAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTL 209

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           I   CK+G++      F EM +  + P+++SY+TL+  +C+   + +A   + ++R   L
Sbjct: 210 INCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGL 269

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
           VP   TY +L+D  C+ G+L  A +L + M   G+  +V+TYT +++G C +  +  A E
Sbjct: 270 VPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEE 329

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
            F +M+  G+ P+  +YT  I G +K  +   A  L +EM  +G  PDL+ Y   +  LC
Sbjct: 330 LFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLC 389

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
            L  +E A  ++ +M   G   +   YT+++ A  +  +   G  L   ML   +  T V
Sbjct: 390 GLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAV 449

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVK-GIRPNVITYNALINGLCRLRRIDQAYGLFID 653
           T+ VLI        +  A  YF  +    G++ N   Y A+I+GLC+  +++ A  LF  
Sbjct: 450 TFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQ 509

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIE 695
           M ++G++P++  YT LI+     GN  +AL L  +M +  +E
Sbjct: 510 MAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGVE 551



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 94/200 (47%)

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           P    ++ L   L +    EEA +   KM      P   +   ++H    +G     +  
Sbjct: 61  PGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRF 120

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
           F +M+  G  PT+ TY ++I      G +E A   F EM+ +G+ P+ +TYN++I+G  +
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGK 180

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
           + R+D     F +M+     P+  TY  LIN  C  G   + L  ++EM    ++P+  +
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVS 240

Query: 701 HSALLLKQLDKDYKVHAVEY 720
           +S L+     +D    A+++
Sbjct: 241 YSTLVDAFCKEDMMQQALKF 260



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 18/210 (8%)

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV--------GDGF----------I 555
           M   GF   + +Y ++ H L       +AN +LR+MV         D F          +
Sbjct: 1   MNRNGFKHTIESYCIVAHILFCARMYYDANRILREMVLSKAELKDCDVFDVLWSTRNVCV 60

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           P    + ++    +E          F+ M R  + P   +   L+H  A  G+ +    +
Sbjct: 61  PGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRF 120

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
           F +M   G +P V TYN +I+ +C+   I+ A GLF +M+  G++P+  TY  +I+    
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGK 180

Query: 676 AGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            G   + +  ++EM     EPD  T++ L+
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNTLI 210



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 1/101 (0%)

Query: 214 IIKVLRDNGFSVKAREVY-RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR 272
           +I  L  N    KA + + R+  +FG++ +   Y  M+D  CKE +++ A  L  +M  +
Sbjct: 454 LIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQK 513

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           G  P+   Y  LI G  + G + QA  L   M ++G++  A
Sbjct: 514 GLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGVESGA 554


>gi|223635763|sp|Q9LER0.2|PP381_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g14770, mitochondrial; Flags: Precursor
          Length = 940

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 145/515 (28%), Positives = 262/515 (50%), Gaps = 4/515 (0%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
           F  +L +  +P+V     ++  L   G    A  +   M E  + P++VTY++M++ + K
Sbjct: 354 FKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVK 413

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
           +G ++EA+ LL +M+ +   PNG TY  +I G  + G+ E A  L ++M  +G++ + + 
Sbjct: 414 KGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYI 473

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
            + ++      G + E   L ++MV++GV      Y  LI    K G    A     EM 
Sbjct: 474 LDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQ 533

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
            + +  D++SYN L+ G  + G +G A   +  +R + + P + T+N +++   + GD E
Sbjct: 534 ERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSE 592

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
              +L + M + GI P +++  I+V   C+ G +  A    N+M+   + P+   Y   +
Sbjct: 593 GILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFL 652

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
               K       ++  E +L+ G       YN L+  LCKLG  ++A  ++  M   GFI
Sbjct: 653 DTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFI 712

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           PD +T+ S++H       +R+    ++ M+  G+SP + TY  +I   +  G ++    +
Sbjct: 713 PDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKW 772

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
            SEM+ +G+RP+  TYNALI+G  ++  +  +  ++ +M  +G++P   TY +LI+E  N
Sbjct: 773 LSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFAN 832

Query: 676 AGNWQEALRLYKEMLDREIEPD---YCTHSALLLK 707
            G   +A  L KEM  R + P+   YCT  + L K
Sbjct: 833 VGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCK 867



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 149/523 (28%), Positives = 260/523 (49%), Gaps = 33/523 (6%)

Query: 203 GLLPDVKNCNRIIKVLRDNGF-SVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQE 261
           G++PD +  N +I     NG    +   +Y  M   G+ P +   N ++ SFCK G +  
Sbjct: 90  GVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSF 149

Query: 262 ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC 321
           A+ LL   + R  S + VTYN +I+G   +G  ++A   + +M+K+G+     SYN +I 
Sbjct: 150 AISLL---RNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLID 206

Query: 322 GYSEKGLLVEALNLEEE----------------------------MVTRGVAPTLATYNI 353
           G+ + G  V A  L +E                            MV  G  P + T++ 
Sbjct: 207 GFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSS 266

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           +I  LCK G+V +      EM   +V P+ ++Y TL+    ++     A  L+ ++  R 
Sbjct: 267 IINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRG 326

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           +   +V Y  L+DGL + GDL  A++  + ++    +P+V+TYT +V+G CK G+LS A 
Sbjct: 327 IPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAE 386

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
               +ML K + P+   Y++ I G +K G   EA  L  +M  +   P+  TY  ++ GL
Sbjct: 387 FIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGL 446

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
            K G  E A EL ++M   G   ++    ++++    +G ++  + L  +M+ KG++   
Sbjct: 447 FKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQ 506

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
           + YT LI      G  E A  +  EMQ +G+  +V++YN LI+G+ +  ++   +  +  
Sbjct: 507 INYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWA-YKG 565

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
           M E+GI P+  T+ I++N     G+ +  L+L+ +M    I+P
Sbjct: 566 MREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKP 608



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 157/595 (26%), Positives = 275/595 (46%), Gaps = 72/595 (12%)

Query: 188 MVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR------------------- 228
           + ++     ++M++ G+LPD  + N +I      G  V+A+                   
Sbjct: 178 LADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLS 237

Query: 229 ---------EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGV 279
                    E YR M   G  P +VT++++++  CK G++ E   LL EM+     PN V
Sbjct: 238 SYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHV 297

Query: 280 TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
           TY  L+    +      A  L   M+  G+ V    Y  ++ G  + G L EA    + +
Sbjct: 298 TYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKML 357

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
           +     P + TY  L+ GLCK G +S A     +ML K+VIP++++Y++++ GY + G +
Sbjct: 358 LEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGML 417

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
            EA  L  ++  +N+VP   TY T+IDGL + G  E+A +L + M   G+  +      +
Sbjct: 418 EEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDAL 477

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           VN   ++G +   +    +M+ KG+  D+  YT+ I    K GD   A    EEM  +G 
Sbjct: 478 VNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGM 537

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
           P D+++YNVL+ G+ K G +  A+   + M   G  PD  T+  ++++  + GD      
Sbjct: 538 PWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILK 596

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT--------- 630
           L++ M   G+ P+L++  +++      G++E A    ++M +  I PN+ T         
Sbjct: 597 LWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSS 656

Query: 631 --------------------------YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
                                     YN LI  LC+L    +A  +  DME  G +P+  
Sbjct: 657 KHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTV 716

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL--------LLKQLDK 711
           T+  L++      + ++AL  Y  M++  I P+  T++ +        L+K++DK
Sbjct: 717 TFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDK 771



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 124/432 (28%), Positives = 211/432 (48%), Gaps = 34/432 (7%)

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNL-EEEMVTRGVAPTLATYNILIYGLCKWG 362
           M   G+   +  +N +I  ++  GL+ + ++L   +M+  GV+P +   N+LI+  CK G
Sbjct: 86  MCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVG 145

Query: 363 RVSDARHRFFEMLRKNVIP-DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           R+S A      +LR  VI  D ++YNT++ G C  G   EA+    E+    ++P  V+Y
Sbjct: 146 RLSFA----ISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSY 201

Query: 422 NTLIDGLCRYGDLEVAQQLKE----------------------------NMINQGILPDV 453
           NTLIDG C+ G+   A+ L +                            +M+  G  PDV
Sbjct: 202 NTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDV 261

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
           +T++ ++N  CK G +        EM    + P+   YTT +    K      A  L  +
Sbjct: 262 VTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQ 321

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           M+ +G P DL+ Y VL+ GL K G L EA +  + ++ D  +P+ +TYT+++    + GD
Sbjct: 322 MVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGD 381

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
           L     +   ML K + P +VTY+ +I+ +  +G LE A     +M+ + + PN  TY  
Sbjct: 382 LSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGT 441

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
           +I+GL +  + + A  L  +M   G+  N Y    L+N     G  +E   L K+M+ + 
Sbjct: 442 VIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKG 501

Query: 694 IEPDYCTHSALL 705
           +  D   +++L+
Sbjct: 502 VTLDQINYTSLI 513



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 135/540 (25%), Positives = 258/540 (47%), Gaps = 1/540 (0%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K ++    L ++++M+  G+  D+     ++  L   G   +A + ++M+ E    P++V
Sbjct: 308 KANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVV 367

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY  ++D  CK G++  A  ++ +M  +   PN VTY+ +I G+ + G LE+A  L+R M
Sbjct: 368 TYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKM 427

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
               +  +  +Y  +I G  + G    A+ L +EM   GV       + L+  L + GR+
Sbjct: 428 EDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRI 487

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            + +    +M+ K V  D I+Y +L+  + + G+   A    +E++ R +   VV+YN L
Sbjct: 488 KEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVL 547

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           I G+ ++G +  A    + M  +GI PD+ T+ IM+N   K G+     + +++M   G+
Sbjct: 548 ISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGI 606

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
           +P   +    +    + G   EA  +  +M+     P+L TY + +    K    +   +
Sbjct: 607 KPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFK 666

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
               ++  G       Y ++I    ++G  ++   +  +M  +G  P  VT+  L+H + 
Sbjct: 667 THETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYF 726

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
               +  A   +S M   GI PNV TYN +I GL     I +      +M+  G+ P+ +
Sbjct: 727 VGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDF 786

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           TY  LI+     GN + ++ +Y EM+   + P   T++ L+ +  +    + A E L+ +
Sbjct: 787 TYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEM 846



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 127/542 (23%), Positives = 237/542 (43%), Gaps = 47/542 (8%)

Query: 194 LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
            +  +ML   ++P+V   + +I      G   +A  + R M +  + P+  TY T++D  
Sbjct: 387 FIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGL 446

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
            K G+ + A+EL  EM+  G   N    + L+    R G +++ +GL++DM+  G+ +  
Sbjct: 447 FKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQ 506

Query: 314 HSYNPIICGY----------------SEKGLLVEALNLE------------------EEM 339
            +Y  +I  +                 E+G+  + ++                    + M
Sbjct: 507 INYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGM 566

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
             +G+ P +AT+NI++    K G        + +M    + P ++S N ++   C +G +
Sbjct: 567 REKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKM 626

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
            EA  + +++    + P + TY   +D   ++   +   +  E +++ GI      Y  +
Sbjct: 627 EEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTL 686

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           +   CK+G    A     +M  +G  PD   + + + G        +A      M+  G 
Sbjct: 687 IATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGI 746

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
            P++ TYN ++ GL   G ++E ++ L +M   G  PD  TY ++I    ++G+++    
Sbjct: 747 SPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMT 806

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
           ++  M+  GL P   TY VLI   A  G++  A     EM  +G+ PN  TY  +I+GLC
Sbjct: 807 IYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLC 866

Query: 640 RL------------RRIDQAYGLFIDM-EEEGILPNKYTYTILINENCNAGNWQEALRLY 686
           +L              + +A GL  +M EE+G +P   T   +       G   +A R  
Sbjct: 867 KLCTHPDVEWNKKAMYLAEAKGLLKEMVEEKGYIPCNQTIYWISAAFSKPGMKVDAERFL 926

Query: 687 KE 688
           KE
Sbjct: 927 KE 928



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 182/363 (50%), Gaps = 11/363 (3%)

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI-GEAFLLFDELRSRNLVPTVVTY 421
           R+  A      M    V+PD   +N+L++ +  +G +  +  L++ ++ +  + P V   
Sbjct: 75  RLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFAL 134

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           N LI   C+ G L  A  L  N +   I  D +TY  +++G C+ G    A +F +EM++
Sbjct: 135 NVLIHSFCKVGRLSFAISLLRNRV---ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVK 191

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
            G+ PD  +Y T I G  K+G+   A  L +E+       +LIT+ +L+     L ++EE
Sbjct: 192 MGILPDTVSYNTLIDGFCKVGNFVRAKALVDEI----SELNLITHTILLSSYYNLHAIEE 247

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A    R MV  GF PD +T++SII+   + G +  G  L   M    + P  VTYT L+ 
Sbjct: 248 A---YRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVD 304

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
           +         A   +S+M V+GI  +++ Y  L++GL +   + +A   F  + E+  +P
Sbjct: 305 SLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVP 364

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYL 721
           N  TYT L++  C AG+   A  +  +ML++ + P+  T+S+++   + K     AV  L
Sbjct: 365 NVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLL 424

Query: 722 ESL 724
             +
Sbjct: 425 RKM 427


>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
 gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
          Length = 845

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 152/540 (28%), Positives = 261/540 (48%), Gaps = 25/540 (4%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNR-IIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
           +++ + + L   + M+R+G  PD    N  I+   R N   V AR+++  M   G    +
Sbjct: 165 RRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDV-ARDLFDKMPLRGFAQDV 223

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           V+Y T+++  C+ G + EA+EL  EM      P+   Y  L+ G       E+   ++R 
Sbjct: 224 VSYATLIEGLCEAGRIDEAVELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRR 279

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M +LG + S  +Y  ++     +    EA  + +EM  +G+AP + T   +I   CK GR
Sbjct: 280 MKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGR 339

Query: 364 VSDARHRFFEMLR-KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           +SDA  R  E+++ +   P++ +YN L+ G+C  G + +A  L +++R+  + P  VTYN
Sbjct: 340 MSDAL-RVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYN 398

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            LI G C  G +E A +L   M   G++ D  TY  ++N  CK G    A   F+ +  +
Sbjct: 399 LLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETR 458

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G++P+   + + I G  K G    A++  E+M++ G  PD  TY+  +  LCK+   +E 
Sbjct: 459 GIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEG 518

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
              + +M+     P  + YT +IH  L+  +       +  M+  G +P +VTYT  + A
Sbjct: 519 LSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRA 578

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
           +   GRL  A     EM   G+  + + YN L++G   + + D A  +   M     +PN
Sbjct: 579 YCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPN 638

Query: 663 KYTYTILINENCN------------AGNWQ-----EALRLYKEMLDREIEPDYCTHSALL 705
           ++TY IL+                 AG W+     +   L+  M   E  P+  T+S++L
Sbjct: 639 QFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSIL 698



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 146/492 (29%), Positives = 228/492 (46%), Gaps = 19/492 (3%)

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
           R M E G +PS   Y  ++D  C+E + +EA E+L EM  +G +P  VT   +I  + + 
Sbjct: 278 RRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKE 337

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G +  A  ++  M   G K +  +YN ++ G+  +G + +A+ L  +M   GV P   TY
Sbjct: 338 GRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTY 397

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           N+LI G C  G +  A      M    +I D  +YN L+   C+ G   +A  LFD L +
Sbjct: 398 NLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLET 457

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           R + P  VT+N+LI+GLC+ G  ++A +  E M++ G  PD  TY+  +   CKM     
Sbjct: 458 RGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQE 517

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
              F  EML+K ++P    YT  I   LK  +     R   EM++ G  PD++TY   + 
Sbjct: 518 GLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMR 577

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
             C  G L EA  +L +M  +G   D + Y +++     +G       +   M      P
Sbjct: 578 AYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVP 637

Query: 592 TLVTYTVLIHAHAARGRL----------------ELA--FMYFSEMQVKGIRPNVITYNA 633
              TY +L+  H  R RL                EL   F  F  M+     PN  TY++
Sbjct: 638 NQFTYFILLR-HLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSS 696

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
           ++ G     R ++A  L   M+E+ I  N+  YT L+   C +  + +A  L   M+   
Sbjct: 697 ILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHG 756

Query: 694 IEPDYCTHSALL 705
             P   ++  LL
Sbjct: 757 FIPQLMSYQHLL 768



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 126/428 (29%), Positives = 217/428 (50%), Gaps = 4/428 (0%)

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
           +P   TYN +I    R  +L +A   +  M++ G +  A+++N +I GY     +  A +
Sbjct: 150 APTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARD 209

Query: 335 LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
           L ++M  RG A  + +Y  LI GLC+ GR+ +A   F EM +    PD+  Y  L+ G C
Sbjct: 210 LFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ----PDMHMYAALVKGLC 265

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
            +    E  L+   ++     P+   Y  ++D  CR    + A+++ + M  +G+ P V+
Sbjct: 266 NAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVV 325

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
           T T ++N  CK G +S A      M  +G +P+ + Y   + G    G   +A  L  +M
Sbjct: 326 TCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKM 385

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
            A G  PD +TYN+L+ G C  G +E A  LLR M GDG I D  TY ++I+A  + G  
Sbjct: 386 RACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRT 445

Query: 575 RRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
            +   LF+++  +G+ P  VT+  LI+     G+ ++A+ +  +M   G  P+  TY++ 
Sbjct: 446 DQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSF 505

Query: 635 INGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           I  LC+++   +      +M ++ + P+   YTI+I++     N+    R + EM+    
Sbjct: 506 IEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGC 565

Query: 695 EPDYCTHS 702
            PD  T++
Sbjct: 566 NPDVVTYT 573



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 139/500 (27%), Positives = 222/500 (44%), Gaps = 39/500 (7%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P+  TYN ++ S C+  ++  AL  L  M   G  P+  T+N LI G+ R  +++ AR L
Sbjct: 151 PTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDL 210

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
              M   G      SY  +I G  E G + EA+ L  EM      P +  Y  L+ GLC 
Sbjct: 211 FDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ----PDMHMYAALVKGLCN 266

Query: 361 WGR-----------------------------------VSDARHRFFEMLRKNVIPDIIS 385
             R                                     +A     EM  K + P +++
Sbjct: 267 AERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVT 326

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
              ++  YC+ G + +A  + + ++ R   P V TYN L+ G C  G +  A  L   M 
Sbjct: 327 CTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMR 386

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
             G+ PD +TY +++ G C  G++  A      M   GL  D++ Y   I    K G T 
Sbjct: 387 ACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTD 446

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           +A  L + +  +G  P+ +T+N L++GLCK G  + A + L KMV  G  PD  TY+S I
Sbjct: 447 QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFI 506

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
               +M   + G      ML+K + P+ V YT++IH         L    + EM   G  
Sbjct: 507 EHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCN 566

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           P+V+TY   +   C   R+++A  + ++M + G+  +   Y  L++ + + G    A+ +
Sbjct: 567 PDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSI 626

Query: 686 YKEMLDREIEPDYCTHSALL 705
            K+M      P+  T+  LL
Sbjct: 627 LKQMTSVASVPNQFTYFILL 646



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 136/417 (32%), Positives = 195/417 (46%), Gaps = 5/417 (1%)

Query: 312 SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRF 371
           +A +YN +I     +  L  AL     MV  G  P   T+N LI G C+  +V  AR  F
Sbjct: 152 TAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLF 211

Query: 372 FEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY 431
            +M  +    D++SY TL+ G C +G I EA  LF E+      P +  Y  L+ GLC  
Sbjct: 212 DKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ----PDMHMYAALVKGLCNA 267

Query: 432 GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAY 491
              E    +   M   G  P    Y  +V+  C+      A E   EM  KGL P     
Sbjct: 268 ERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTC 327

Query: 492 TTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
           T  I    K G  S+A R+ E M  +G  P++ TYN LV G C  G + +A  LL KM  
Sbjct: 328 TAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRA 387

Query: 552 DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLEL 611
            G  PD +TY  +I      G +     L   M   GL     TY  LI+A    GR + 
Sbjct: 388 CGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQ 447

Query: 612 AFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
           A   F  ++ +GI+PN +T+N+LINGLC+  + D A+     M   G  P+ YTY+  I 
Sbjct: 448 ACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIE 507

Query: 672 ENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQL-DKDYKVHAVEYLESLTLG 727
             C     QE L    EML ++++P    ++ ++ K L +++Y + A  + E ++ G
Sbjct: 508 HLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSG 564



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 135/532 (25%), Positives = 228/532 (42%), Gaps = 19/532 (3%)

Query: 158 ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
           +L  +   GL+ CV       ++  Y K+  +   L V   M   G  P+V   N +++ 
Sbjct: 311 MLQEMFEKGLAPCVVT--CTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQG 368

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
             + G   KA  +   M   G+ P  VTYN ++   C +G ++ A  LL  M+G G   +
Sbjct: 369 FCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIAD 428

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
             TYN LI    ++G  +QA  L   +   G+K +A ++N +I G  + G    A    E
Sbjct: 429 QYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLE 488

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
           +MV+ G  P   TY+  I  LCK     +      EML+K+V P  ++Y  +++   +  
Sbjct: 489 KMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKER 548

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
           N G     + E+ S    P VVTY T +   C  G L  A+ +   M   G+  D + Y 
Sbjct: 549 NYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYN 608

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI-----------------AGELK 500
            +++G   +G    A     +M      P++F Y   +                 AG  K
Sbjct: 609 TLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWK 668

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
             + ++ + L + M    F P+  TY+ ++ G  + G  EEA  L+  M  D    +   
Sbjct: 669 AIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDI 728

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           YT+++    +         L  +M++ G  P L++Y  L+      G+ + A   F   +
Sbjct: 729 YTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSR 788

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
            K   P+ I +  +I+GL +    D +  + I +E     P+  TY +L  E
Sbjct: 789 WKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEE 840



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 131/532 (24%), Positives = 218/532 (40%), Gaps = 89/532 (16%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +  +M   GL P V  C  +I      G    A  V  +M   G KP++ TYN ++  FC
Sbjct: 311 MLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFC 370

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
            EG++ +A+ LL +M+  G +P+ VTYN+LI G   +G +E A  L+R M   GL    +
Sbjct: 371 NEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQY 430

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE- 373
           +YN +I    + G   +A +L + + TRG+ P   T+N LI GLCK G+ +D   +F E 
Sbjct: 431 TYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGK-ADIAWKFLEK 489

Query: 374 -----------------------------------MLRKNVIPDIISYNTLLYGYCRSGN 398
                                              ML+K+V P  ++Y  +++   +  N
Sbjct: 490 MVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERN 549

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
            G     + E+ S    P VVTY T +   C  G L  A+ +   M   G+  D + Y  
Sbjct: 550 YGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNT 609

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI-----------------AGELKL 501
           +++G   +G    A     +M      P++F Y   +                 AG  K 
Sbjct: 610 LMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKA 669

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR-------------- 547
            + ++ + L + M    F P+  TY+ ++ G  + G  EEA  L+               
Sbjct: 670 IELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIY 729

Query: 548 ---------------------KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
                                 M+  GFIP  ++Y  ++   +  G   + +++F N   
Sbjct: 730 TALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRW 789

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           K  SP  + + V+I     +G  +++      ++    RP+  TY  L   L
Sbjct: 790 KDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEEL 841


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 147/505 (29%), Positives = 247/505 (48%), Gaps = 8/505 (1%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K   ++Q   + ++M   G+ P V   N +I+ L   G    A   ++ +      P I+
Sbjct: 42  KAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDII 101

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRG-CSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           T+N ++D+  K G ++EA ++   M     C PN VTY  +I G  ++G+L++A  L+  
Sbjct: 102 TFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDL 161

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M + G   +  +Y+ ++ G  + G   +   L +EM  RG  P +  YN L+ GLCK  R
Sbjct: 162 MNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRR 221

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           + +A      M+R    P +++YN+L+  +CRS  +  AF L   +  R   P V+ YNT
Sbjct: 222 LDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNT 281

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG------NLSMAREFFN 477
           +I GLCR   L+ AQ L + M+    +PDVITY+ +++G CK         L  A E   
Sbjct: 282 VIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILE 341

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            M + G  P+   Y   I G  +   + +A  L   M+     PDL ++++++  LCK  
Sbjct: 342 MMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSH 401

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            L+ A ++   M      P+ + Y ++I    + G++ +   +F  M+ +   P + TY 
Sbjct: 402 DLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMV-ESFRPGVATYN 460

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
            ++      GR+E A      M  K   P+  +Y ALI GLCR+  +++AY LF  +E +
Sbjct: 461 SVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAK 520

Query: 658 GILPNKYTYTILINENCNAGNWQEA 682
           G       Y +L+NE C      +A
Sbjct: 521 GFAMEVGVYNVLVNELCKKKRLSDA 545



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 145/501 (28%), Positives = 241/501 (48%), Gaps = 46/501 (9%)

Query: 247 NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
           N  L+   + G+  +A++L  E +   C PN  TY  LI G  + G+L+QA  L+ +M  
Sbjct: 2   NCALNLLVRAGQHGQAVQLFREER---CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
            G+      +N +I G  + G   +AL   + +      P + T+NIL+  L K GRV +
Sbjct: 59  RGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118

Query: 367 ARHRFFEM-LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
           A   F  M      +P++++Y T++ G C+ G +  A  L D +      P V+TY+ L+
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           +GLC+ G  +    L + M  +G  PDVI Y  ++NG CK   L  A E    M+R G  
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCY 238

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           P    Y + +    +      A+RL + M  +G PPD+I YN ++ GLC+   L++A  L
Sbjct: 239 PTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQAL 298

Query: 546 LRKMVGDGFIPDHITYTSII---------------HASLEMGD----------------- 573
           L++MV    +PD ITY++II                A+ E+ +                 
Sbjct: 299 LKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVV 358

Query: 574 ---LRRGRD------LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
              L R R       L   M+   + P L +++++I +      L+ A+  F  M  +  
Sbjct: 359 IEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSEREC 418

Query: 625 RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
           +PN + Y ALI+GL +   +D+A  +F ++  E   P   TY  +++  C  G  +EA+R
Sbjct: 419 KPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVR 477

Query: 685 LYKEMLDREIEPDYCTHSALL 705
           + + M+ +E  PD  ++ AL+
Sbjct: 478 MVEGMIHKECFPDGASYGALI 498



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 153/559 (27%), Positives = 263/559 (47%), Gaps = 26/559 (4%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           A++ FR     P    +EF + +++  L ++G L  AY             +LD +   G
Sbjct: 17  AVQLFREERCVP----NEFTYGSLIHGLCKAGKLDQAYE------------LLDEMRDRG 60

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
           +   V++   + ++    K       L  F  +      PD+   N ++  L  +G   +
Sbjct: 61  IPPGVAVH--NGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118

Query: 227 AREVYRMMGEFG-IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLI 285
           A +++  M       P++VTY T+++  CK+G++  A+ELL  M   GC PN +TY+VL+
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178

Query: 286 TGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
            G  + G  ++   L+++M + G +     YN ++ G  +   L EAL L + M+  G  
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCY 238

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           PT+ TYN L+   C+  +V  A      M  +   PD+I+YNT++ G CR   + +A  L
Sbjct: 239 PTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQAL 298

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCR------YGDLEVAQQLKENMINQGILPDVITYTIM 459
             ++ +   VP V+TY+T+IDGLC+         LE A ++ E M   G  P+  TY ++
Sbjct: 299 LKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVV 358

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           + G C+      A      M+   + PD  +++  I    K  D   AY++   M  +  
Sbjct: 359 IEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSEREC 418

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
            P+ + Y  L+ GL K G +++A  +   MV + F P   TY S++     +G +     
Sbjct: 419 KPNPVAYAALIDGLSKGGEVDKAVRVFELMV-ESFRPGVATYNSVLDGLCGVGRIEEAVR 477

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
           +   M+ K   P   +Y  LI        +E A+  F  ++ KG    V  YN L+N LC
Sbjct: 478 MVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELC 537

Query: 640 RLRRIDQAYGLFIDMEEEG 658
           + +R+  A+G+   + E G
Sbjct: 538 KKKRLSDAHGVANKLIEAG 556



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 132/478 (27%), Positives = 233/478 (48%), Gaps = 34/478 (7%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETV----VCV-NMHGILDV 161
           AL +F+ V        D   F  +++ L++SG +  A+ + E++     C+ N+     V
Sbjct: 84  ALGYFKTVAGTK-CTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTV 142

Query: 162 LIG----GGLSSCVSIKILDLL--------LLIYT-------KKSMVEQCLLVFNKMLRN 202
           + G    G L    +I++LDL+        ++ Y+       K    ++   +  +M R 
Sbjct: 143 INGLCKDGKLDR--AIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRR 200

Query: 203 GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           G  PDV   N ++  L  +    +A E+ ++M   G  P++VTYN++++ FC+  ++  A
Sbjct: 201 GFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRA 260

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
             L+  M  RGC P+ + YN +I G  R+  L+ A+ L++ M+         +Y+ II G
Sbjct: 261 FRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDG 320

Query: 323 YSEKGLLVEALNLE------EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
             +   +     LE      E M   G  P   TY ++I GLC+  +   A      M+ 
Sbjct: 321 LCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMID 380

Query: 377 KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
             V+PD+ S++ ++   C+S ++  A+ +F  +  R   P  V Y  LIDGL + G+++ 
Sbjct: 381 SEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDK 440

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
           A ++ E M+ +   P V TY  +++G C +G +  A      M+ K   PD  +Y   I 
Sbjct: 441 AVRVFELMV-ESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIR 499

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           G  ++    EAY L + + AKGF  ++  YNVLV+ LCK   L +A+ +  K++  G+
Sbjct: 500 GLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGY 557



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 165/330 (50%), Gaps = 5/330 (1%)

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
           R+G  G+A  LF E R    VP   TY +LI GLC+ G L+ A +L + M ++GI P V 
Sbjct: 10  RAGQHGQAVQLFREERC---VPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVA 66

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
            +  ++ G CK G    A  +F  +      PD   +   +   +K G   EA+++ E M
Sbjct: 67  VHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESM 126

Query: 515 -LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
             +    P+++TY  +++GLCK G L+ A ELL  M   G  P+ ITY+ ++    + G 
Sbjct: 127 HTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGR 186

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
             +G  L   M R+G  P ++ Y  L++      RL+ A      M   G  P V+TYN+
Sbjct: 187 TDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNS 246

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
           L+   CR +++D+A+ L   M E G  P+   Y  +I   C      +A  L K+M+   
Sbjct: 247 LMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAAR 306

Query: 694 IEPDYCTHSALLLKQLDKDYKVHAVEYLES 723
             PD  T+S  ++  L KD++V A   LE+
Sbjct: 307 CVPDVITYST-IIDGLCKDWRVDADWKLEA 335



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 2/100 (2%)

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           PN  TY +LI+GLC+  ++DQAY L  +M + GI P    +  +I   C AG + +AL  
Sbjct: 28  PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGY 87

Query: 686 YKEMLDREIEPDYCTHSALLLKQLDKDYKV-HAVEYLESL 724
           +K +   +  PD  T + +L+  L K  +V  A +  ES+
Sbjct: 88  FKTVAGTKCTPDIITFN-ILVDALVKSGRVEEAFQIFESM 126



 Score = 43.5 bits (101), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 34/151 (22%), Positives = 57/151 (37%), Gaps = 36/151 (23%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F  M      P+      +I  L   G   KA  V+ +M E   +P + TYN++LD  C
Sbjct: 409 IFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVE-SFRPGVATYNSVLDGLC 467

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTY--------------------------------- 281
             G ++EA+ ++  M  + C P+G +Y                                 
Sbjct: 468 GVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVG 527

Query: 282 --NVLITGFSRNGELEQARGLIRDMLKLGLK 310
             NVL+    +   L  A G+   +++ G K
Sbjct: 528 VYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 133/417 (31%), Positives = 215/417 (51%), Gaps = 3/417 (0%)

Query: 279 VTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
           + YN ++ G+   G+L+ AR L+ +M    ++  A++YN +I G   +G    AL + +E
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
           M+ R   P + TY IL+   CK      A     EM  K   PDI++YN ++ G C+ G 
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           + +A      L S    P  V+YN ++ GLC     E A++L   M  +G  P+V+T+ +
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           +++  C+ G +  A E   ++ + G  P+  +Y   +    K     +A    + M+++G
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
             PD+++YN L+  LC+ G ++ A ELL ++   G  P  I+Y ++I    + G  +   
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 297

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           +L N M+ KGL P ++TY+ +        R+E A   F ++Q  GIRPN + YNA+I GL
Sbjct: 298 ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL 357

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIE 695
           C+ R    A  LF  M   G +PN+ TYTILI      G  +EA  L  E+  R  E
Sbjct: 358 CKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRAGE 414



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 122/383 (31%), Positives = 203/383 (53%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           PD    N +I+ L   G +  A  V   M      P +VTY  +L++ CK    ++A++L
Sbjct: 30  PDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKL 89

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           L EM+ +GC+P+ VTYNV++ G  + G ++ A   ++++   G + +  SYN ++ G   
Sbjct: 90  LDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCT 149

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
                +A  L  EM  +G  P + T+N+LI  LC+ G V  A     ++ +    P+ +S
Sbjct: 150 AERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLS 209

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           YN LL+ +C+   + +A    D + SR   P +V+YNTL+  LCR G+++VA +L   + 
Sbjct: 210 YNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK 269

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
           ++G  P +I+Y  +++G  K G    A E  NEM+ KGLQPD   Y+T  AG  +     
Sbjct: 270 DKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIE 329

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           +A R   ++   G  P+ + YN ++ GLCK      A +L   M+G+G +P+  TYT +I
Sbjct: 330 DAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 389

Query: 566 HASLEMGDLRRGRDLFNNMLRKG 588
                 G ++  RDL + +  + 
Sbjct: 390 EGLAYEGLIKEARDLLDELCSRA 412



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 196/388 (50%)

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
           R++ E  ++P   TYNT++   C  G    AL +L EM  R C P+ VTY +L+    + 
Sbjct: 21  RLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKR 80

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
              +QA  L+ +M   G      +YN ++ G  ++G + +A+   + + + G  P   +Y
Sbjct: 81  SGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSY 140

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           NI++ GLC   R  DA     EM +K   P+++++N L+   CR G +  A  + +++  
Sbjct: 141 NIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPK 200

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
               P  ++YN L+   C+   ++ A    + M+++G  PD+++Y  ++   C+ G + +
Sbjct: 201 YGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDV 260

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A E  +++  KG  P   +Y T I G  K G T EA  L  EM++KG  PD+ITY+ +  
Sbjct: 261 AVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAA 320

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           GLC+   +E+A     K+   G  P+ + Y +II    +  +     DLF  M+  G  P
Sbjct: 321 GLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMP 380

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEM 619
              TYT+LI   A  G ++ A     E+
Sbjct: 381 NESTYTILIEGLAYEGLIKEARDLLDEL 408



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 190/357 (53%), Gaps = 3/357 (0%)

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
            YN ++ G C  G++  AR    EM    V PD  +YNTL+ G C  G    A  + DE+
Sbjct: 2   AYNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDEM 58

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
             R  VP VVTY  L++  C+    + A +L + M ++G  PD++TY ++VNG C+ G +
Sbjct: 59  LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 118

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A EF   +   G +P+  +Y   + G        +A  L  EM  KG PP+++T+N+L
Sbjct: 119 DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNML 178

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           +  LC+ G +E A E+L ++   G  P+ ++Y  ++HA  +   + +     + M+ +G 
Sbjct: 179 ISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGC 238

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
            P +V+Y  L+ A    G +++A     +++ KG  P +I+YN +I+GL +  +  +A  
Sbjct: 239 YPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALE 298

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
           L  +M  +G+ P+  TY+ +    C     ++A+R + ++ D  I P+   ++A++L
Sbjct: 299 LLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIIL 355



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 113/357 (31%), Positives = 189/357 (52%)

Query: 193 LLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDS 252
           L V ++MLR   +PDV     +++         +A ++   M + G  P IVTYN +++ 
Sbjct: 52  LAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNG 111

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
            C+EG + +A+E L  +   GC PN V+YN+++ G       E A  L+ +M + G   +
Sbjct: 112 ICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPN 171

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
             ++N +I     KGL+  AL + E++   G  P   +YN L++  CK  ++  A     
Sbjct: 172 VVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLD 231

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
            M+ +   PDI+SYNTLL   CRSG +  A  L  +L+ +   P +++YNT+IDGL + G
Sbjct: 232 LMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAG 291

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
             + A +L   M+++G+ PD+ITY+ +  G C+   +  A   F ++   G++P+   Y 
Sbjct: 292 KTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYN 351

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
             I G  K  +T  A  L   M+  G  P+  TY +L+ GL   G ++EA +LL ++
Sbjct: 352 AIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 408



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 124/411 (30%), Positives = 194/411 (47%), Gaps = 3/411 (0%)

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           + YN M+  +C  G++  A  L+ EM      P+  TYN LI G    G    A  ++ +
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           ML+        +Y  ++    ++    +A+ L +EM  +G  P + TYN+++ G+C+ GR
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           V DA      +      P+ +SYN +L G C +    +A  L  E+  +   P VVT+N 
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           LI  LCR G +E A ++ E +   G  P+ ++Y  +++  CK   +  A  F + M+ +G
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
             PD  +Y T +    + G+   A  L  ++  KG  P LI+YN ++ GL K G  +EA 
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 297

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
           ELL +MV  G  PD ITY++I         +      F  +   G+ P  V Y  +I   
Sbjct: 298 ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL 357

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
             R     A   F+ M   G  PN  TY  LI GL     I +A  L  ++
Sbjct: 358 CKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 408



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 178/341 (52%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +LL    K+S  +Q + + ++M   G  PD+   N ++  +   G    A E  + +  +
Sbjct: 72  ILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSY 131

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G +P+ V+YN +L   C     ++A EL+ EM  +GC PN VT+N+LI+   R G +E A
Sbjct: 132 GCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPA 191

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             ++  + K G   ++ SYNP++  + ++  + +A+   + MV+RG  P + +YN L+  
Sbjct: 192 LEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTA 251

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           LC+ G V  A     ++  K   P +ISYNT++ G  ++G   EA  L +E+ S+ L P 
Sbjct: 252 LCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPD 311

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           ++TY+T+  GLCR   +E A +    + + GI P+ + Y  ++ G CK      A + F 
Sbjct: 312 IITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFA 371

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
            M+  G  P+   YT  I G    G   EA  L +E+ ++ 
Sbjct: 372 YMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRA 412



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 123/241 (51%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           ++   ++L+    +K +VE  L V  ++ + G  P+  + N ++          KA    
Sbjct: 171 NVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFL 230

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
            +M   G  P IV+YNT+L + C+ GE+  A+ELL +++ +GC+P  ++YN +I G ++ 
Sbjct: 231 DLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKA 290

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G+ ++A  L+ +M+  GL+    +Y+ I  G   +  + +A+    ++   G+ P    Y
Sbjct: 291 GKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLY 350

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           N +I GLCK      A   F  M+    +P+  +Y  L+ G    G I EA  L DEL S
Sbjct: 351 NAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCS 410

Query: 412 R 412
           R
Sbjct: 411 R 411



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 99/201 (49%), Gaps = 3/201 (1%)

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
           + YN +V G C  G L+ A  L+ +M  +   PD  TY ++I      G       + + 
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMPVE---PDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           MLR+   P +VTYT+L+ A   R   + A     EM+ KG  P+++TYN ++NG+C+  R
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSA 703
           +D A     ++   G  PN  +Y I++   C A  W++A  L  EM  +   P+  T + 
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 704 LLLKQLDKDYKVHAVEYLESL 724
           L+     K     A+E LE +
Sbjct: 178 LISFLCRKGLVEPALEVLEQI 198


>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
 gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
          Length = 577

 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 139/486 (28%), Positives = 243/486 (50%), Gaps = 29/486 (5%)

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           Y T+++ FCK G++ +A ELL EM+ RG   + + ++ LI G  R G +++A    + M 
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM- 60

Query: 306 KLGLKVSAH--SYNPIICGYSEKGLLVEALNLEEEMVTR-----GVAPTLATYNILIYGL 358
             G + S +  +YN ++ G  +   + E L L ++M  R     G  P + +Y+ +I  L
Sbjct: 61  --GEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDAL 118

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           CK  RV  A   F  M      P++++Y++L+ G C+   + EA+ L  +L+  ++VP  
Sbjct: 119 CKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRA 178

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           + YN +++G  R G      +L  +M  +G   ++I +  M++   K      A +FF  
Sbjct: 179 MYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFER 238

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           +L+ G +P+   Y   + G  K G   EAYR+  EM+     PD+ITY+ ++ G CK G 
Sbjct: 239 LLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGR 298

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           +++A+++  +M+    IP  +T+ +++H   E    R    +  +M+  G  P L TY V
Sbjct: 299 MDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNV 358

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           L+        +E A   + +M+ K  +P+  TY  LI  LCR RR+D+A      ME + 
Sbjct: 359 LMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADN 418

Query: 659 ILPNKYTYTILIN-------------------ENCNAGNWQEALRLYKEMLDREIEPDYC 699
           ++PN      L+                    E C AG   EA+ + ++M+ + + PD  
Sbjct: 419 VVPNGAICHALVEVLCKQGEVDEACSVLDNVVEICKAGEPDEAVEVIEQMVLKGVRPDEA 478

Query: 700 THSALL 705
           T+ A+L
Sbjct: 479 TYVAVL 484



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 148/546 (27%), Positives = 254/546 (46%), Gaps = 25/546 (4%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K   V+Q   + ++M   G+  DV   + +I+ L   G   +A E ++ MGE    P+
Sbjct: 9   FCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGE-ECSPN 67

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGR-----GCSPNGVTYNVLITGFSRNGELEQA 297
           ++TYNT+++  CK   + E LEL  +M+ R     GC P+ ++Y+ +I    +   +++A
Sbjct: 68  VITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKA 127

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
               + M  +G   +  +Y+ +I G  +   + EA +L  ++    + P    YN ++ G
Sbjct: 128 YEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNG 187

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
             + G+ S+       M  K    +II +N +L+   ++    +A   F+ L      P 
Sbjct: 188 FKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPN 247

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           VVTYN  + GLC+ G ++ A ++   M+   + PDVITY+ +++G CK G +  A + F 
Sbjct: 248 VVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFT 307

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            M+     P    + T + G  +   + EA+R+ E+M+  GF P L TYNVL+  +C   
Sbjct: 308 RMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGAD 367

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
           S+E A E+  KM      PD  TY  +I        +   ++  + M    + P      
Sbjct: 368 SVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICH 427

Query: 598 VLIHAHAARGRLELAFMYFS-------------------EMQVKGIRPNVITYNALINGL 638
            L+     +G ++ A                        +M +KG+RP+  TY A++  L
Sbjct: 428 ALVEVLCKQGEVDEACSVLDNVVEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSL 487

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
           C L R+D A   F  M   G  P   TYT+LI E C+A    +A R+++ M+     P  
Sbjct: 488 CGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGFTPQA 547

Query: 699 CTHSAL 704
            T   L
Sbjct: 548 QTMRTL 553



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 102/397 (25%), Positives = 170/397 (42%), Gaps = 59/397 (14%)

Query: 173 IKILDLLLLIYT--KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV 230
           I I+D   +++   K    E+    F ++L++G  P+V   N  +  L   G   K  E 
Sbjct: 211 INIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAG---KVDEA 267

Query: 231 YRM---MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITG 287
           YR+   M E  + P ++TY++++D FCK G M +A ++   M    C P+ VT+  L+ G
Sbjct: 268 YRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHG 327

Query: 288 FSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPT 347
           FS + +  +A  +  DM                                   V  G  P 
Sbjct: 328 FSEHKKSREAFRVHEDM-----------------------------------VNAGFIPG 352

Query: 348 LATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFD 407
           L TYN+L+  +C    V  A   + +M RK   PD  +Y  L+   CR+  + EA    D
Sbjct: 353 LQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLD 412

Query: 408 ELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG 467
            + + N+VP     + L++ LC+ G+++ A  + +N++                  CK G
Sbjct: 413 VMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVE----------------ICKAG 456

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
               A E   +M+ KG++PD   Y   +     L     A    E+M ++G  P L+TY 
Sbjct: 457 EPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYT 516

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
           +L+   C     ++A  +   MV  GF P   T  ++
Sbjct: 517 LLIGEACSADMADDAFRIFEAMVAAGFTPQAQTMRTL 553


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 131/438 (29%), Positives = 233/438 (53%), Gaps = 3/438 (0%)

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           ++E ++L  +M      P+ V ++ +++  +++   +    L   M   G+    +SYN 
Sbjct: 50  LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           +I         V AL++  +M+  G  P + T + LI G C+  RV DA     +M    
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
             PD++ YNT++ G C+ G + +A  LFD +    +    VTYN+L+ GLC  G    A 
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
           +L  +M+ + I+P+VIT+T +++   K G  S A + + EM R+ + PD F Y + I G 
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
              G   EA ++ + M+ KG  PD++TYN L++G CK   ++E  +L R+M   G + D 
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 349

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
           ITY +II    + G     +++F+ M  +   P + TY++L++      R+E A + F  
Sbjct: 350 ITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFEN 406

Query: 619 MQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGN 678
           MQ   I  ++ TYN +I+G+C++  ++ A+ LF  +  +G+ P+  +YT +I+  C    
Sbjct: 407 MQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQ 466

Query: 679 WQEALRLYKEMLDREIEP 696
           W ++  LY++M +  + P
Sbjct: 467 WDKSDLLYRKMQEDGLLP 484



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 134/446 (30%), Positives = 242/446 (54%), Gaps = 7/446 (1%)

Query: 184 TKKSM--VEQCLLVFNKMLRNGLLPDVKNCNRII-KVLRDNGFSVKAREVYRMMGEFGIK 240
           TK+S   +E+ + +F KM+++  LP + + ++++ K+ +   + +    ++  M   GI 
Sbjct: 43  TKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDL-VISLFHHMEVCGIG 101

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
             + +YN +++  C+      AL ++ +M   G  P+ VT + LI GF +   +  A  L
Sbjct: 102 HDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDL 161

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  M ++G +     YN II G  + GL+ +A+ L + M   GV     TYN L+ GLC 
Sbjct: 162 VSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCC 221

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            GR SDA     +M+ ++++P++I++  ++  + + G   EA  L++E+  R + P V T
Sbjct: 222 SGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFT 281

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YN+LI+GLC +G ++ A+Q+ + M+ +G LPDV+TY  ++NG CK   +    + F EM 
Sbjct: 282 YNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMA 341

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           ++GL  D   Y T I G  + G    A  +   M ++   P++ TY++L++GLC    +E
Sbjct: 342 QRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVE 398

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           +A  L   M       D  TY  +IH   ++G++    DLF ++  KGL P +V+YT +I
Sbjct: 399 KALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMI 458

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRP 626
                + + + + + + +MQ  G+ P
Sbjct: 459 SGFCRKRQWDKSDLLYRKMQEDGLLP 484



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 119/374 (31%), Positives = 202/374 (54%), Gaps = 3/374 (0%)

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
            ++L   M   G+   L +YNI+I  LC+  R   A     +M++    PD+++ ++L+ 
Sbjct: 88  VISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLIN 147

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
           G+C+   + +A  L  ++      P VV YNT+IDG C+ G +  A +L + M   G+  
Sbjct: 148 GFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRA 207

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           D +TY  +V G C  G  S A     +M+ + + P+   +T  I   +K G  SEA +L 
Sbjct: 208 DAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLY 267

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
           EEM  +   PD+ TYN L++GLC  G ++EA ++L  MV  G +PD +TY ++I+   + 
Sbjct: 268 EEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKS 327

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
             +  G  LF  M ++GL    +TY  +I  +   GR + A   FS M     RPN+ TY
Sbjct: 328 KRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTY 384

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           + L+ GLC   R+++A  LF +M++  I  +  TY I+I+  C  GN ++A  L++ +  
Sbjct: 385 SILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSC 444

Query: 692 REIEPDYCTHSALL 705
           + ++PD  +++ ++
Sbjct: 445 KGLKPDVVSYTTMI 458



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 173/355 (48%), Gaps = 13/355 (3%)

Query: 361 WGRVSDARHR----------FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           WGR    +            F +M++   +P I+ ++ +L    +S N      LF  + 
Sbjct: 37  WGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHME 96

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
              +   + +YN +I+ LCR     +A  +   M+  G  PDV+T + ++NG C+   + 
Sbjct: 97  VCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVF 156

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            A +  ++M   G +PD   Y T I G  K+G  ++A  L + M   G   D +TYN LV
Sbjct: 157 DAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLV 216

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
            GLC  G   +A  L+R MV    +P+ IT+T++I   ++ G       L+  M R+ + 
Sbjct: 217 AGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD 276

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           P + TY  LI+     GR++ A      M  KG  P+V+TYN LING C+ +R+D+   L
Sbjct: 277 PDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKL 336

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           F +M + G++ +  TY  +I     AG    A  ++  M  R   P+  T+S LL
Sbjct: 337 FREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILL 388



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 127/235 (54%), Gaps = 3/235 (1%)

Query: 182 IYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKP 241
           ++ K+    + + ++ +M R  + PDV   N +I  L  +G   +A+++  +M   G  P
Sbjct: 253 VFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLP 312

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
            +VTYNT+++ FCK   + E  +L  EM  RG   + +TYN +I G+ + G  + A+ + 
Sbjct: 313 DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIF 372

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
               ++  + +  +Y+ ++ G      + +AL L E M    +   + TYNI+I+G+CK 
Sbjct: 373 S---RMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKI 429

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           G V DA   F  +  K + PD++SY T++ G+CR     ++ LL+ +++   L+P
Sbjct: 430 GNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 124/364 (34%), Positives = 198/364 (54%)

Query: 198 KMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG 257
           KM++ G  P +     ++          +A  +   M  FG  P++V YNT+++  CK  
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR 198

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
           ++  ALE+ + M+ +G   + VTYN LI+G S +G    A  L+RDM+K  +  +   + 
Sbjct: 199 DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFT 258

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            +I  + ++G L+EA NL +EM+ R V P + TYN LI G C  G + DA++ F  M+ K
Sbjct: 259 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 318

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
              PD+++YNTL+ G+C+S  + +   LF E+  + LV    TYNTLI G C+ G L VA
Sbjct: 319 GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVA 378

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
           Q++   M++ G+ PD++TY I+++  C  G +  A     ++ +  +  D   Y   I G
Sbjct: 379 QKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQG 438

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
             +     EA+ L   +  KG  PD I Y  ++ GLC+ G   EA++L R+M  DGF+P 
Sbjct: 439 LCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 498

Query: 558 HITY 561
              Y
Sbjct: 499 ERIY 502



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 128/378 (33%), Positives = 199/378 (52%)

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M + G +PSIVT  ++L+ FC+    QEA+ L+  M G G  PN V YN +I G  +N +
Sbjct: 140 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 199

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           L  A  +   M K G++  A +YN +I G S  G   +A  L  +MV R + P +  +  
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 259

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           LI    K G + +AR+ + EM+R++V+P++ +YN+L+ G+C  G +G+A  +FD + S+ 
Sbjct: 260 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 319

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
             P VVTYNTLI G C+   +E   +L   M  QG++ D  TY  +++G C+ G L++A+
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 379

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
           + FN M+  G+ PD   Y   +      G   +A  + E++       D+ITYN+++ GL
Sbjct: 380 KVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGL 439

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
           C+   L+EA  L R +   G  PD I Y ++I      G  R    L   M   G  P+ 
Sbjct: 440 CRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSE 499

Query: 594 VTYTVLIHAHAARGRLEL 611
             Y   +  H      EL
Sbjct: 500 RIYDETLRDHYTSLSAEL 517



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/439 (29%), Positives = 226/439 (51%)

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
           +  +A  L  EM      P+ V +  ++T  ++  + +    L   M  LG+    +S+ 
Sbjct: 59  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            +I  +     L  AL L  +M+  G  P++ T   L+ G C+  R  +A      M   
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
             +P+++ YNT++ G C++ ++  A  +F  +  + +    VTYNTLI GL   G    A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
            +L  +M+ + I P+VI +T +++   K GNL  AR  + EM+R+ + P+ F Y + I G
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
               G   +A  + + M++KG  PD++TYN L+ G CK   +E+  +L  +M   G + D
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 358

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
             TY ++IH   + G L   + +FN M+  G+SP +VTY +L+      G++E A +   
Sbjct: 359 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 418

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
           ++Q   +  ++ITYN +I GLCR  ++ +A+ LF  +  +G+ P+   Y  +I+  C  G
Sbjct: 419 DLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 478

Query: 678 NWQEALRLYKEMLDREIEP 696
             +EA +L + M +    P
Sbjct: 479 LQREADKLCRRMKEDGFMP 497



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 129/426 (30%), Positives = 217/426 (50%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PSIV +  +L    K  +    + L  +M+  G S +  ++ +LI  F R   L  A  L
Sbjct: 77  PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  M+KLG + S  +   ++ G+ +     EA++L + M   G  P +  YN +I GLCK
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
              +++A   F+ M +K +  D ++YNTL+ G   SG   +A  L  ++  R + P V+ 
Sbjct: 197 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 256

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           +  LID   + G+L  A+ L + MI + ++P+V TY  ++NG C  G L  A+  F+ M+
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 316

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            KG  PD   Y T I G  K     +  +L  EM  +G   D  TYN L+HG C+ G L 
Sbjct: 317 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN 376

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
            A ++  +MV  G  PD +TY  ++      G + +   +  ++ +  +   ++TY ++I
Sbjct: 377 VAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIII 436

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                  +L+ A+  F  +  KG++P+ I Y  +I+GLCR     +A  L   M+E+G +
Sbjct: 437 QGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFM 496

Query: 661 PNKYTY 666
           P++  Y
Sbjct: 497 PSERIY 502



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 131/439 (29%), Positives = 220/439 (50%), Gaps = 2/439 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
           +F +ML++  +P + +  R++ V+ + N F +    +Y  M   GI   + ++  ++  F
Sbjct: 66  LFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDI-VIYLYHKMENLGISHDLYSFTILIHCF 124

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           C+   +  AL LL +M   G  P+ VT   L+ GF +    ++A  L+  M   G   + 
Sbjct: 125 CRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNV 184

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
             YN +I G  +   L  AL +   M  +G+     TYN LI GL   GR +DA     +
Sbjct: 185 VIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRD 244

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M+++ + P++I +  L+  + + GN+ EA  L+ E+  R++VP V TYN+LI+G C +G 
Sbjct: 245 MVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGC 304

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           L  A+ + + M+++G  PDV+TY  ++ G CK   +    + F EM  +GL  D F Y T
Sbjct: 305 LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT 364

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            I G  + G  + A ++   M+  G  PD++TYN+L+  LC  G +E+A  ++  +    
Sbjct: 365 LIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSE 424

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
              D ITY  II        L+    LF ++ RKG+ P  + Y  +I     +G    A 
Sbjct: 425 MDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREAD 484

Query: 614 MYFSEMQVKGIRPNVITYN 632
                M+  G  P+   Y+
Sbjct: 485 KLCRRMKEDGFMPSERIYD 503



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 119/356 (33%), Positives = 187/356 (52%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           SI  L  LL  + + +  ++ + + + M   G +P+V   N +I  L  N     A EV+
Sbjct: 148 SIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVF 207

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
             M + GI+   VTYNT++      G   +A  LL +M  R   PN + +  LI  F + 
Sbjct: 208 YCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKE 267

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G L +AR L ++M++  +  +  +YN +I G+   G L +A  + + MV++G  P + TY
Sbjct: 268 GNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTY 327

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           N LI G CK  RV D    F EM  + ++ D  +YNTL++GYC++G +  A  +F+ +  
Sbjct: 328 NTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVD 387

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
             + P +VTYN L+D LC  G +E A  + E++    +  D+ITY I++ G C+   L  
Sbjct: 388 CGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKE 447

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
           A   F  + RKG++PD  AY T I+G  + G   EA +L   M   GF P    Y+
Sbjct: 448 AWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 503



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 105/215 (48%)

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           Y  ++  EL      +A+ L  EML     P ++ +  ++  + K+   +    L  KM 
Sbjct: 47  YRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKME 106

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
             G   D  ++T +IH       L     L   M++ G  P++VT   L++      R +
Sbjct: 107 NLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQ 166

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
            A      M   G  PNV+ YN +INGLC+ R ++ A  +F  ME++GI  +  TY  LI
Sbjct: 167 EAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLI 226

Query: 671 NENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +   N+G W +A RL ++M+ R+I+P+    +AL+
Sbjct: 227 SGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 261


>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
 gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
          Length = 564

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 137/454 (30%), Positives = 242/454 (53%), Gaps = 5/454 (1%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLL--PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIK 240
           + K  ++++ L+ FN+M+  GL+  P++ N + +  ++R N F  KA   +  + E  +K
Sbjct: 103 HLKSQLLDKALIFFNEMVDKGLVFRPNIFN-SLLGSLVRSNCFE-KAWLFFNELKE-RVK 159

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
             + ++  M+   C+ G + ++ +LL  +Q  G SPN V Y  LI G  +NG++E+AR  
Sbjct: 160 FDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLF 219

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
              M ++GL  + +++  +I G  +KGL  +  +L E+M   G+ P L TYN L+   C 
Sbjct: 220 FDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCG 279

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G++  A   F EM  + V  ++++YNTL+ G CR   + EA  L D+++   + P ++T
Sbjct: 280 EGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLIT 339

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YNTLI G C  G+L+ A  L + + + G+ P ++TY I++ G  K GN     +   EM 
Sbjct: 340 YNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREME 399

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            +G+ P +   T  I   ++L +  +A+++   M   G  PD+  Y VL+HGLC  G+++
Sbjct: 400 GRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMK 459

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           E+++L R M      P  + Y ++IH   +  +  R   L   M  KGL P + +Y+ +I
Sbjct: 460 ESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSII 519

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
                 G+ E A +   +M    ++P+    N +
Sbjct: 520 GVLCKDGKWEEAEVLLDKMIELQLKPSASILNMI 553



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 131/474 (27%), Positives = 242/474 (51%), Gaps = 9/474 (1%)

Query: 241 PSIVT---YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           PS+ T   Y +++++  K   + +AL    EM  +G       +N L+    R+   E+A
Sbjct: 88  PSMTTALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKA 147

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L  + LK  +K   +S+  +I G  E G L ++  L   +   G++P +  Y  LI G
Sbjct: 148 W-LFFNELKERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDG 206

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
            CK G +  AR  F +M    ++ +  ++  L+ G  + G   + F LF++++   L P 
Sbjct: 207 CCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPN 266

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           + TYN L++  C  G +  A  L + M  +G+  +V+TY  ++ G C+   +  A +  +
Sbjct: 267 LYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVD 326

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           +M +  + P+   Y T I G   +G+  +A  L +++ + G  P L+TYN+L+ G  K G
Sbjct: 327 QMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAG 386

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
           + +   +L R+M G G  P  +T T +I A + + ++ +   ++++M + GL P +  Y 
Sbjct: 387 NWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYG 446

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           VLIH    +G ++ +   F  M    + P+ + YN +I+G C+     +A  L  +ME +
Sbjct: 447 VLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAK 506

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDK 711
           G++PN  +Y+ +I   C  G W+EA  L  +M++ +++P     SA +L  + K
Sbjct: 507 GLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKP-----SASILNMISK 555



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 123/414 (29%), Positives = 218/414 (52%), Gaps = 1/414 (0%)

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
            +A  Y  II  + +  LL +AL    EMV +G+      +N L+  L +      A   
Sbjct: 91  TTALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKA-WL 149

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
           FF  L++ V  D+ S+  ++ G C +GN+ ++F L   L+   L P VV Y TLIDG C+
Sbjct: 150 FFNELKERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCK 209

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
            GD+E A+   + M   G++ +  T+T+++NG  K G      + F +M   GL P+ + 
Sbjct: 210 NGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYT 269

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           Y   +      G    A+ L +EM  +G   +++TYN L+ G+C+   + EA +L+ +M 
Sbjct: 270 YNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMK 329

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
                P+ ITY ++I    ++G+L +   L + +   GLSP+LVTY +LI  ++  G  +
Sbjct: 330 KAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWK 389

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
                  EM+ +GI P+ +T   LI+   RL+ +++A+ ++  ME+ G++P+ Y Y +LI
Sbjct: 390 GVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLI 449

Query: 671 NENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           +  C  GN +E+ +L++ M +  +EP    ++ ++     +D    A+  L  +
Sbjct: 450 HGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREM 503



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/257 (21%), Positives = 108/257 (42%), Gaps = 15/257 (5%)

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A   FN  +++G Q    + +  +   L       A  L  ++L+        T   L+H
Sbjct: 21  ALSLFNSSIQQGFQHTHHSISFLLQHLLDHHKLPHAQSLILQILSNKISSPFFTVPSLLH 80

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
            L +  +      LL              Y SII+A L+   L +    FN M+ KGL  
Sbjct: 81  HLTQNQNPSMTTALL--------------YESIINAHLKSQLLDKALIFFNEMVDKGLVF 126

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
               +  L+ +       E A+++F+E++ + ++ +V ++  +I G C    +D+++ L 
Sbjct: 127 RPNIFNSLLGSLVRSNCFEKAWLFFNELKER-VKFDVYSFGIMIKGCCENGNLDKSFQLL 185

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDK 711
             +++ G+ PN   YT LI+  C  G+ + A   + +M +  +  +  T + L+     K
Sbjct: 186 GLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKK 245

Query: 712 DYKVHAVEYLESLTLGA 728
             K    +  E + +  
Sbjct: 246 GLKKDGFDLFEKMKING 262


>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
          Length = 792

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 139/450 (30%), Positives = 235/450 (52%), Gaps = 3/450 (0%)

Query: 186 KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK-VLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           + M ++   +  +M+  GLLP     N +IK +LRD  +   A  + +++ + G+ P + 
Sbjct: 339 EGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWK-DAIGLLKLVVDTGV-PDVF 396

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY  ++   CK  ++ EA+ L  +M+  G  P+ VTY+ L+ G+   G +++A  L  +M
Sbjct: 397 TYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEM 456

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
              G   +  +Y  ++ GY +K     A  L  EM   GV+    TYNILI GL    RV
Sbjct: 457 PDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRV 516

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            +        L +  +P  ++YN+++ G+ ++G +G AF ++ ++R + + P +VTY + 
Sbjct: 517 CEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSF 576

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           IDG CR    ++A +L   +   GI PD+  Y   ++  CK GN+S A  F   +L+ GL
Sbjct: 577 IDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGL 636

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            PD   Y + + G   L   +EA +    M+ +    D   Y  L+ G  K+G++  A E
Sbjct: 637 TPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALE 696

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           L  +M+ +  IPD  T+T++ H     GD+   + L ++M R  +SP +VTY +LI+A  
Sbjct: 697 LYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACV 756

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
             G+L+ AF    EM   G+ P+  TY+ L
Sbjct: 757 RDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 168/602 (27%), Positives = 266/602 (44%), Gaps = 72/602 (11%)

Query: 174 KILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPD-------------VKNCNRIIKVL-- 218
           K+ D+++    +  M    + +F++M   G+ PD             +++ +R ++VL  
Sbjct: 186 KMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGK 245

Query: 219 -RDNGFS-------------VKAR---EVYRMMGEF----GIKPSIVTYNTMLDSFCKEG 257
            R+ GF              VK R   E  R+  +     G K  +V    ++  +C  G
Sbjct: 246 MREAGFEPWELTYSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNG 305

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
           E+ +AL+L  E+   G +P  VTY VLI G    G  ++   L R M++ GL  S + +N
Sbjct: 306 EVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFN 365

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            +I G        +A+ L + +V  GV P + TY  LI+ LCK  ++ +A + + +M   
Sbjct: 366 LVIKGLLRDKRWKDAIGLLKLVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEA 424

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
            V P I++Y++LL GYC  G + EA  L+ E+  +   P  VTY TL+ G  +    + A
Sbjct: 425 GVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNA 484

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
             L   M   G+     TY I++NG   +  +    E     L +G  P    Y + I G
Sbjct: 485 YALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIING 544

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
            +K G    A+ +  +M  KG  P+++TY   + G C+    + A +LL  +  DG  PD
Sbjct: 545 FVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPD 604

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY--------------------- 596
              Y + I    + G++ R       +L+ GL+P +  Y                     
Sbjct: 605 IAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYY 664

Query: 597 --------------TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
                         T LI   +  G +  A   +SEM    + P+  T+ AL +GLCR  
Sbjct: 665 SMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSG 724

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
            ID A  L  DM    + PN  TY +LIN     G  QEA +L+ EML   + PD  T+ 
Sbjct: 725 DIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYD 784

Query: 703 AL 704
            L
Sbjct: 785 IL 786



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 143/528 (27%), Positives = 253/528 (47%), Gaps = 2/528 (0%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL+     +     L +F++M   G   D K  + +I+     G    A  ++  M   G
Sbjct: 156 LLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAG 215

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           +KP    Y   +   CK  +   AL++L +M+  G  P  +TY+ ++    +   +++A 
Sbjct: 216 VKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVRRMDEAL 275

Query: 299 GLIRDM-LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
            L   M L  G K+       ++ GY   G + +AL+L +E+V+ GV PT  TY +LI G
Sbjct: 276 RLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVLIKG 335

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
               G   +      +M+ + ++P    +N ++ G  R     +A  L  +L     VP 
Sbjct: 336 CDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLL-KLVVDTGVPD 394

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           V TY  LI  LC++  L  A  L + M   G+ P ++TY  ++ G C+ G +  A + ++
Sbjct: 395 VFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYS 454

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           EM  KG  P+   YTT + G +K      AY L  EM   G      TYN+L++GL  + 
Sbjct: 455 EMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVN 514

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            + E +E+L++ + +GF+P  +TY SII+  ++ G +     ++  M +KG++P +VTYT
Sbjct: 515 RVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYT 574

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
             I  +      +LA      ++  GI+P++  YNA I+  C+   + +A    + + ++
Sbjct: 575 SFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKD 634

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           G+ P+   Y   +    N     EA + Y  M+ + +  D   ++ L+
Sbjct: 635 GLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLI 682



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 144/510 (28%), Positives = 225/510 (44%), Gaps = 35/510 (6%)

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
           Y  M   G+ P   +   +L +        +AL L  EM+G+GC  +   Y+V+I    R
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
            G    A  L  +M   G+K     Y   I G  +      AL +  +M   G  P   T
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257

Query: 351 YNILIYGLCKWGRVSDA-RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           Y+ ++  L K  R+ +A R +   +L      D++    L++GYC +G +G+A  LFDE+
Sbjct: 258 YSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEV 317

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL------------------- 450
            S  + PT VTY  LI G    G  +   +L   MI QG+L                   
Sbjct: 318 VSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRW 377

Query: 451 ---------------PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
                          PDV TY  +++  CK   L  A   +++M   G++P    Y + +
Sbjct: 378 KDAIGLLKLVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLL 437

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
            G  + G   EA +L  EM  KGFPP+ +TY  L+ G  K  + + A  LL +M  +G  
Sbjct: 438 LGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVS 497

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
               TY  +I+    +  +    ++    L +G  PT +TY  +I+     G +  AF  
Sbjct: 498 CGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGM 557

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
           + +M+ KGI PN++TY + I+G CR    D A  L I +  +GI P+   Y   I+  C 
Sbjct: 558 YRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCK 617

Query: 676 AGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            GN   AL     +L   + PD   +++ +
Sbjct: 618 QGNMSRALHFLVLLLKDGLTPDVTVYNSFV 647



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 140/304 (46%), Gaps = 37/304 (12%)

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           M+ +G++PD  + T ++  +    + + A   F+EM  KG   D   Y   I   ++ G 
Sbjct: 141 MVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGM 200

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
             +A RL +EM   G  PD   Y + + GLCKL   + A ++L KM   GF P  +TY+S
Sbjct: 201 HCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSS 260

Query: 564 II------------------------------------HASLEMGDLRRGRDLFNNMLRK 587
           ++                                    H     G++ +  DLF+ ++  
Sbjct: 261 VVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVSD 320

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
           G++PT VTY VLI    A G  +  +    +M  +G+ P+   +N +I GL R +R   A
Sbjct: 321 GVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDA 380

Query: 648 YGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLK 707
            GL   + + G+ P+ +TY  LI+  C      EA+ L+ +M +  ++P   T+ +LLL 
Sbjct: 381 IGLLKLVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLG 439

Query: 708 QLDK 711
             +K
Sbjct: 440 YCEK 443


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 139/464 (29%), Positives = 229/464 (49%), Gaps = 9/464 (1%)

Query: 229 EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
           E  R++G    +P   T   ++      G   EA  +L       C P+ + YN ++ G+
Sbjct: 85  EALRLVGS-ARRPDAGTCAALIKKLSASGRTAEARRVLA-----ACGPDVMAYNAMMAGY 138

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
              G+++ AR   R   +  ++  A++ + +I G   +G    AL + +EM+ R   P +
Sbjct: 139 CGAGQVDAAR---RWCAERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDV 195

Query: 349 ATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDE 408
            TY IL+   CK      A     EM  K   PDI++YN ++ G C+ G + +A      
Sbjct: 196 VTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKN 255

Query: 409 LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
           L S    P  V+YN ++ GLC     E A++L   M  +G  P+V+T+ ++++  C+ G 
Sbjct: 256 LPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGL 315

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
           +  A E   ++ + G  P+  +Y   +    K     +A    + M+++G  PD+++YN 
Sbjct: 316 VEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNT 375

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           L+  LC+ G ++ A ELL ++   G  P  I+Y ++I    + G  +   +L N M+ KG
Sbjct: 376 LLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKG 435

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
           L P ++TY+ +        R+E A   F ++Q  GIRPN + YNA+I GLC+ R    A 
Sbjct: 436 LQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAI 495

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
            LF  M   G +PN+ TYTILI      G  +EA  L  E+  R
Sbjct: 496 DLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSR 539



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 122/382 (31%), Positives = 204/382 (53%)

Query: 207 DVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELL 266
           D   C+ +I+ L   G +  A  V   M      P +VTY  +L++ CK    ++A++LL
Sbjct: 159 DAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLL 218

Query: 267 WEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEK 326
            EM+ +GC+P+ VTYNV++ G  + G ++ A   ++++   G + +  SYN ++ G    
Sbjct: 219 DEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTA 278

Query: 327 GLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISY 386
               +A  L  EM  +G  P + T+N+LI  LC+ G V  A     ++ +    P+ +SY
Sbjct: 279 ERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSY 338

Query: 387 NTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMIN 446
           N LL+ +C+   + +A    D + SR   P +V+YNTL+  LCR G+++VA +L   + +
Sbjct: 339 NPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKD 398

Query: 447 QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSE 506
           +G  P +I+Y  +++G  K G    A E  NEM+ KGLQPD   Y+T  AG  +     +
Sbjct: 399 KGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIED 458

Query: 507 AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
           A R   ++   G  P+ + YN ++ GLCK      A +L   M+G+G +P+  TYT +I 
Sbjct: 459 AIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIE 518

Query: 567 ASLEMGDLRRGRDLFNNMLRKG 588
                G ++  RDL + +  +G
Sbjct: 519 GLAYEGLIKEARDLLDELCSRG 540



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 142/491 (28%), Positives = 221/491 (45%), Gaps = 19/491 (3%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           PD   C  +IK L  +G + +AR V    G     P ++ YN M+  +C  G++  A   
Sbjct: 96  PDAGTCAALIKKLSASGRTAEARRVLAACG-----PDVMAYNAMMAGYCGAGQVDAARRW 150

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
             E   R    +  T + LI G    G    A  ++ +ML+        +Y  ++    +
Sbjct: 151 CAE---RAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCK 207

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
           +    +A+ L +EM  +G  P + TYN+++ G+C+ GRV DA      +      P+ +S
Sbjct: 208 RSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVS 267

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           YN +L G C +    +A  L  E+  +   P VVT+N LI  LCR G +E A ++ E + 
Sbjct: 268 YNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIP 327

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
             G  P+ ++Y  +++  CK   +  A  F + M+ +G  PD  +Y T +    + G+  
Sbjct: 328 KYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVD 387

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
            A  L  ++  KG  P LI+YN ++ GL K G  +EA ELL +MV  G  PD ITY++I 
Sbjct: 388 VAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIA 447

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
                   +      F  +   G+ P  V Y  +I     R     A   F+ M   G  
Sbjct: 448 AGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCM 507

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEG--------ILPNKYTYTILINENCNAG 677
           PN  TY  LI GL     I +A  L  ++   G        ++   +  T L   N N G
Sbjct: 508 PNESTYTILIEGLAYEGLIKEARDLLDELCSRGEEILLDVHLIDVAFLTTFLPCSNANGG 567

Query: 678 NWQEALRLYKE 688
            +   LRL  E
Sbjct: 568 PF---LRLPPE 575



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 195/377 (51%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           D L+     +      L V ++MLR   +PDV     +++         +A ++   M +
Sbjct: 164 DTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRD 223

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G  P IVTYN +++  C+EG + +A+E L  +   GC PN V+YN+++ G       E 
Sbjct: 224 KGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWED 283

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  L+ +M + G   +  ++N +I     KGL+  AL + E++   G +P   +YN L++
Sbjct: 284 AEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLH 343

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
             CK  ++  A      M+ +   PDI+SYNTLL   CRSG +  A  L  +L+ +   P
Sbjct: 344 AFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAP 403

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
            +++YNT+IDGL + G  + A +L   M+++G+ PD+ITY+ +  G C+   +  A   F
Sbjct: 404 VLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAF 463

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
            ++   G++P+   Y   I G  K  +T  A  L   M+  G  P+  TY +L+ GL   
Sbjct: 464 GKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYE 523

Query: 537 GSLEEANELLRKMVGDG 553
           G ++EA +LL ++   G
Sbjct: 524 GLIKEARDLLDELCSRG 540



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 119/417 (28%), Positives = 207/417 (49%), Gaps = 12/417 (2%)

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           R GEL++A         L L  SA   +   C    K L       E   V     P + 
Sbjct: 79  RRGELDEA---------LRLVGSARRPDAGTCAALIKKLSASGRTAEARRVLAACGPDVM 129

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
            YN ++ G C  G+V  AR    E   + V  D  + +TL+ G C  G    A  + DE+
Sbjct: 130 AYNAMMAGYCGAGQVDAARRWCAE---RAVERDAYTCDTLIRGLCGRGRTANALAVLDEM 186

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
             R  VP VVTY  L++  C+    + A +L + M ++G  PD++TY ++VNG C+ G +
Sbjct: 187 LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 246

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A EF   +   G +P+  +Y   + G        +A  L  EM  KG PP+++T+N+L
Sbjct: 247 DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNML 306

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           +  LC+ G +E A E+L ++   G  P+ ++Y  ++HA  +   + +     + M+ +G 
Sbjct: 307 ISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGC 366

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
            P +V+Y  L+ A    G +++A     +++ KG  P +I+YN +I+GL +  +  +A  
Sbjct: 367 YPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALE 426

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
           L  +M  +G+ P+  TY+ +    C     ++A+R + ++ D  I P+   ++A++L
Sbjct: 427 LLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIIL 483



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 123/242 (50%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           ++   ++L+    +K +VE  L V  ++ + G  P+  + N ++          KA    
Sbjct: 299 NVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFL 358

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
            +M   G  P IV+YNT+L + C+ GE+  A+ELL +++ +GC+P  ++YN +I G ++ 
Sbjct: 359 DLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKA 418

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G+ ++A  L+ +M+  GL+    +Y+ I  G   +  + +A+    ++   G+ P    Y
Sbjct: 419 GKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLY 478

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           N +I GLCK      A   F  M+    +P+  +Y  L+ G    G I EA  L DEL S
Sbjct: 479 NAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCS 538

Query: 412 RN 413
           R 
Sbjct: 539 RG 540



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 118/256 (46%), Gaps = 13/256 (5%)

Query: 473 REFFNEMLR---KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
           R   +E LR      +PD       I      G T+EA R+   + A G  PD++ YN +
Sbjct: 80  RGELDEALRLVGSARRPDAGTCAALIKKLSASGRTAEARRV---LAACG--PDVMAYNAM 134

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIP-DHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           + G C  G ++ A    R+   +  +  D  T  ++I      G       + + MLR+ 
Sbjct: 135 MAGYCGAGQVDAA----RRWCAERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRR 190

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
             P +VTYT+L+ A   R   + A     EM+ KG  P+++TYN ++NG+C+  R+D A 
Sbjct: 191 CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAI 250

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQ 708
               ++   G  PN  +Y I++   C A  W++A  L  EM  +   P+  T + L+   
Sbjct: 251 EFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFL 310

Query: 709 LDKDYKVHAVEYLESL 724
             K     A+E LE +
Sbjct: 311 CRKGLVEPALEVLEQI 326



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 65/128 (50%)

Query: 184 TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
           TK    ++ L + N+M+  GL PD+   + I   L        A   +  + + GI+P+ 
Sbjct: 416 TKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNT 475

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           V YN ++   CK  E   A++L   M G GC PN  TY +LI G +  G +++AR L+ +
Sbjct: 476 VLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDE 535

Query: 304 MLKLGLKV 311
           +   G ++
Sbjct: 536 LCSRGEEI 543


>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
          Length = 946

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 159/556 (28%), Positives = 253/556 (45%), Gaps = 68/556 (12%)

Query: 218 LRDNGFSV-----------KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELL 266
           LR +GF++           K RE   ++      P  V Y  ++   C+    +EA++ L
Sbjct: 225 LRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFL 284

Query: 267 WEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEK 326
             M+   C PN VTY+ L+ G     +L + + ++  M+  G   S   +N ++  Y   
Sbjct: 285 NRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTS 344

Query: 327 GLLVEALNLEEEMVTRGVAPTLATYNILIYGLC------KWGRVSDARHRFFEMLRKNVI 380
           G    A  L ++MV  G  P    YNILI  +C       +  +  A   + EML   V+
Sbjct: 345 GDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVV 404

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
            + I+ ++     C +G   +AF +  E+  +  +P   TY+ +++ LC    +E+A  L
Sbjct: 405 LNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLL 464

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
            E M   G++ DV TYTIMV+  CK G +  AR++FNEM   G  P+   YT  I   LK
Sbjct: 465 FEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLK 524

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG--------- 551
               S A  L E ML++G  P+++TY+ L+ G CK G +E+A ++  +M G         
Sbjct: 525 AKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDM 584

Query: 552 ---------------------DGFI---------------------PDHITYTSIIHASL 569
                                DGF                      P+ I Y ++I    
Sbjct: 585 YFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC 644

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
           ++G L   +++   M   G   TL TY+ LI  +    R +LA    S+M      PNV+
Sbjct: 645 KVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVV 704

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
            Y  +I+GLC++ + D+AY L   MEE+G  PN  TYT +I+     G  +  L L + M
Sbjct: 705 IYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERM 764

Query: 690 LDREIEPDYCTHSALL 705
             + + P+Y T+  L+
Sbjct: 765 GSKGVAPNYVTYRVLI 780



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 188/688 (27%), Positives = 304/688 (44%), Gaps = 74/688 (10%)

Query: 57  YYKELIISTVE----EKPWAFCNNRWVSDHFQAVVSDPELLVRVLNRIR-EKPRIALRFF 111
           +Y +LI    E    E+   F N    +     VV+   LL   LN+ +  + +  L   
Sbjct: 263 FYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMM 322

Query: 112 RWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVV-CVNMHG--ILDVLIGGGLS 168
                 P  K    +F +++     SG    AY +++ +V C +M G  + ++LIG   S
Sbjct: 323 MMEGCYPSPK----IFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIG---S 375

Query: 169 SCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR 228
            C     L+  LL   +K+        +++ML  G++ +  N +   + L   G   KA 
Sbjct: 376 ICGDKDSLNFDLLDLAEKA--------YSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAF 427

Query: 229 EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
            V R M   G  P   TY+ +L+  C   +M+ A  L  EM+  G   +  TY +++  F
Sbjct: 428 SVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSF 487

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
            + G +EQAR    +M ++G   +  +Y  +I  Y +   +  A  L E M++ G  P +
Sbjct: 488 CKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNI 547

Query: 349 ATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI----------------ISYNTLLYG 392
            TY+ LI G CK G+V  A   F  M     +PD+                ++Y  LL G
Sbjct: 548 VTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDG 607

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
           +C+S  + EA  L D +      P  + Y+ LIDGLC+ G L+ AQ++K  M   G    
Sbjct: 608 FCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPAT 667

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
           + TY+ +++   K+    +A +  ++ML     P+   YT  I G  K+G T EAY+L +
Sbjct: 668 LYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQ 727

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
            M  KG  P+++TY  ++ G   +G +E   ELL +M   G  P+++TY  +I    + G
Sbjct: 728 MMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNG 787

Query: 573 DLRRGRDLFNNM-----------LRK-------------GL---------SPTLVTYTVL 599
            L    +L   M            RK             GL         +P L  Y +L
Sbjct: 788 ALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLL 847

Query: 600 IHAHAARGRLELAFMYFSEMQV--KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           I       RLE+A     E+      +     TYN+LI  LC   +++ A+ LF +M ++
Sbjct: 848 IDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKK 907

Query: 658 GILPNKYTYTILINENCNAGNWQEALRL 685
           G++P   ++  LI          EAL L
Sbjct: 908 GVIPEMQSFCSLIKGLFRNSKISEALLL 935



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 129/468 (27%), Positives = 215/468 (45%), Gaps = 9/468 (1%)

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
           + G K +   YN ++D   ++ + +   E L +++       G   NVL+    RNG   
Sbjct: 117 QIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGQFLNVLVRKHCRNGSFS 176

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
            A   +  +     + S  +YN +I  + +   L  A  +  EM    +     T     
Sbjct: 177 IALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFA 236

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
           Y LCK G+    R     +  +N +PD + Y  L+ G C +    EA    + +R+ + +
Sbjct: 237 YSLCKVGK---WREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCL 293

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P VVTY+TL+ G      L   +++   M+ +G  P    +  +V+  C  G+ S A + 
Sbjct: 294 PNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKL 353

Query: 476 FNEMLRKGLQPDRFAYTTQIAG------ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             +M++ G  P    Y   I         L       A +   EMLA G   + I  +  
Sbjct: 354 LKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSF 413

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
              LC  G  E+A  ++R+M+G GFIPD  TY+ +++       +     LF  M R GL
Sbjct: 414 TRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGL 473

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
              + TYT+++ +    G +E A  +F+EM+  G  PNV+TY ALI+   + +++  A  
Sbjct: 474 VADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANE 533

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           LF  M  EG LPN  TY+ LI+ +C AG  ++A ++++ M   +  PD
Sbjct: 534 LFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPD 581



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 100/379 (26%), Positives = 171/379 (45%), Gaps = 9/379 (2%)

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           N+L+   C+ G  S A      +      P   +YN L+  + ++  +  A L+  E+  
Sbjct: 163 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 222

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
            NL     T       LC+ G    A  L E    +  +PD + YT +++G C+      
Sbjct: 223 ANLRMDGFTLRCFAYSLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEE 279

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A +F N M      P+   Y+T + G L         R+   M+ +G  P    +N LVH
Sbjct: 280 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 339

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA------SLEMGDLRRGRDLFNNML 585
             C  G    A +LL+KMV  G +P ++ Y  +I +      SL    L      ++ ML
Sbjct: 340 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEML 399

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
             G+    +  +       + G+ E AF    EM  +G  P+  TY+ ++N LC   +++
Sbjct: 400 AAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKME 459

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            A+ LF +M+  G++ + YTYTI+++  C AG  ++A + + EM +    P+  T++AL+
Sbjct: 460 LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 519

Query: 706 LKQLDKDYKVHAVEYLESL 724
              L      +A E  E++
Sbjct: 520 HAYLKAKKVSYANELFETM 538



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 119/250 (47%), Gaps = 39/250 (15%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V +KML N   P+V     +I  L   G + +A ++ +MM E G +P++VTY  M+D F 
Sbjct: 690 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 749

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
             G+++  LELL  M  +G +PN VTY VLI    +NG L+ A  L+ +M +        
Sbjct: 750 MIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA 809

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA------------------------- 349
            Y  +I G++++   +E+L L +E+     AP L+                         
Sbjct: 810 GYRKVIEGFNKE--FIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEV 867

Query: 350 ------------TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
                       TYN LI  LC   +V  A   F EM +K VIP++ S+ +L+ G  R+ 
Sbjct: 868 ATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNS 927

Query: 398 NIGEAFLLFD 407
            I EA LL D
Sbjct: 928 KISEALLLLD 937


>gi|357121994|ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Brachypodium distachyon]
          Length = 726

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 153/529 (28%), Positives = 265/529 (50%), Gaps = 2/529 (0%)

Query: 171 VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLR--DNGFSVKAR 228
           V +++ + LL    +++ +     +F+ M  +G  P+V + + ++      D  +  +A 
Sbjct: 172 VELQLCNFLLKCLVERNQIIYARSLFDDMKSSGPSPNVYSYSVLMSAYTHGDRLYLAEAF 231

Query: 229 EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
           E+   M   G+KP+  TY T L    +  ++  A   L  +  RG   N   +N +I GF
Sbjct: 232 ELLSEMEMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGF 291

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
            R G++++A  +   M K GL    HSY+ ++ G  ++G ++   +L  EM   G+APTL
Sbjct: 292 CREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTL 351

Query: 349 ATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDE 408
            +Y+ L++GLC+ G+V  A   F  +  +    D I Y+ +L G C+  NI     L+++
Sbjct: 352 VSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWND 411

Query: 409 LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
           +   N VP    Y +LI   CR+ +L  A  + E M++ G+ P+V+T TI+V+G  K   
Sbjct: 412 MVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERM 471

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
           +  A  F +++ + G+ P+   Y   I G  K+  +   + +  +M+ +G+ PD + Y++
Sbjct: 472 IDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSI 531

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           ++    K   L EA  L  KM+ +G  P+  TYTS+I+       L     LF +M+ +G
Sbjct: 532 IIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEG 591

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
           L+P  + YT LI  +  R  ++ A   F  M   G+  +   Y  LI G  ++  +D A 
Sbjct: 592 LTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQ 651

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
            L  +M  +G+ P+  TYT LI      G+ ++A   Y  ML   I PD
Sbjct: 652 CLMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKANMTYNSMLQAGITPD 700



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 137/461 (29%), Positives = 240/461 (52%), Gaps = 2/461 (0%)

Query: 247 NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL--EQARGLIRDM 304
           N +L    +  ++  A  L  +M+  G SPN  +Y+VL++ ++    L   +A  L+ +M
Sbjct: 178 NFLLKCLVERNQIIYARSLFDDMKSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEM 237

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
              G+K +A +Y   + G S    +  A N  + +  RG       +N +I G C+ G+V
Sbjct: 238 EMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQV 297

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            +A   F  M +  ++PD  SY+ L+ G C+ G++   + L  E+    + PT+V+Y++L
Sbjct: 298 QEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSL 357

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           + GLCR G +E+A +L   +  QG   D I Y+I++NG C+  N+ +  + +N+M+    
Sbjct: 358 LHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNF 417

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            PD + YT+ I    +  + ++A  + E ML  G  P+++T  +LV G  K   ++EA  
Sbjct: 418 VPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFL 477

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
            L K+   G +P+   Y  II+   ++        +F +M+++G  P  V Y+++I +  
Sbjct: 478 FLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFV 537

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
              +L  AF  F +M  +G +PNV TY +LINGLC   R+ +   LF  M  EG+ P++ 
Sbjct: 538 KALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRI 597

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            YT LI   C   N + AL +++ M    +  D   ++ L+
Sbjct: 598 LYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLI 638



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/475 (26%), Positives = 232/475 (48%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           + ++M   G+ P+       +  L        A    +M+ + G   +   +N ++  FC
Sbjct: 233 LLSEMEMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFC 292

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           +EG++QEA+E+   M+  G  P+  +Y++L+ G  + G++     L+ +M + G+  +  
Sbjct: 293 REGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLV 352

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           SY+ ++ G    G +  A  L   +  +G       Y+I++ G C+   +      + +M
Sbjct: 353 SYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDM 412

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           +  N +PD  +Y +L+Y +CR  N+ +A  +F+ +    + P VVT   L+DG  +   +
Sbjct: 413 VHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMI 472

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A      +   GI+P++  Y +++NG CK+         F +M+++G  PD   Y+  
Sbjct: 473 DEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSII 532

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I   +K     EA+RL  +ML +G  P++ TY  L++GLC    L E   L + M+ +G 
Sbjct: 533 IDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGL 592

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            PD I YTS+I    +  +++   ++F  M + GLS     YT LI   +    ++ A  
Sbjct: 593 TPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQC 652

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL 669
              EM  KG+ P+V+TY  LI G  ++    +A   +  M + GI P+     IL
Sbjct: 653 LMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKANMTYNSMLQAGITPDAKLSCIL 707



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 207/419 (49%), Gaps = 37/419 (8%)

Query: 325 EKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV--SDARHRFFEMLRKNVIPD 382
           E+  ++ A +L ++M + G +P + +Y++L+       R+  ++A     EM  K V P+
Sbjct: 186 ERNQIIYARSLFDDMKSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEMKGVKPN 245

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
             +Y T LYG  R+  +  A+     L  R        +N +I G CR G ++ A ++ +
Sbjct: 246 AATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVFD 305

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            M   G++PD  +Y+I+V+G CK G++    +   EM R G+ P   +Y++ + G  + G
Sbjct: 306 AMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAG 365

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
               A+ L   +  +GF  D I Y+++++G C+  ++E   +L   MV   F+PD   YT
Sbjct: 366 KVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYT 425

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
           S+I+A     +L     +F  ML  G+SP +VT T+L+        ++ AF++  +++  
Sbjct: 426 SLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQF 485

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDM---------------------------- 654
           GI PN+  Y  +INGLC++ + D  +G+F DM                            
Sbjct: 486 GIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEA 545

Query: 655 -------EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
                   +EG  PN +TYT LIN  C+     E + L+K M+   + PD   +++L++
Sbjct: 546 FRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIV 604



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 114/426 (26%), Positives = 212/426 (49%), Gaps = 2/426 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + ++  V++ + VF+ M + GL+PD  + + ++  L   G  +   ++   M   GI P+
Sbjct: 291 FCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPT 350

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +V+Y+++L   C+ G+++ A EL   ++ +G   + + Y++++ G  ++  +E    L  
Sbjct: 351 LVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWN 410

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           DM+       A++Y  +I  +     L +AL + E M+  GV+P + T  IL+ G  K  
Sbjct: 411 DMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGK-E 469

Query: 363 RVSDARHRFFEMLRK-NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           R+ D    F   +R+  ++P++  Y  ++ G C+       + +F ++  R  VP  V Y
Sbjct: 470 RMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVY 529

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           + +ID   +   L  A +L   M+++G  P+V TYT ++NG C    L      F  M+ 
Sbjct: 530 SIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIW 589

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
           +GL PDR  YT+ I    K  +   A  +   M   G   D   Y  L+ G  K+ +++ 
Sbjct: 590 EGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDG 649

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A  L+ +M   G  P  +TYT++I    ++GD R+    +N+ML+ G++P      +L  
Sbjct: 650 AQCLMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKANMTYNSMLQAGITPDAKLSCILGF 709

Query: 602 AHAARG 607
            + A G
Sbjct: 710 GNDADG 715


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 140/454 (30%), Positives = 234/454 (51%), Gaps = 4/454 (0%)

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
            Y+ ++ S  K G + +ALE+   M+   C P+ VTYNVLI      GE  +A  L + M
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 305 LKLG-LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
            +   ++    +YN +I G    G    A  L  EM  + +A  + TY+ +I  L K  +
Sbjct: 72  KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
             ++     EM+     PD+ ++N ++ G+ RS N+ +A  ++  +      P  V+Y+ 
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191

Query: 424 LIDGLCRYGDLEVAQQLKENMINQ--GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           LI GL + G L+ + ++   M  +  G +P+VIT++ +++G C+ G L  A E F  ML 
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 251

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
            G +P+++ YTT IAG  +     +A  L E+M     PPD + YN L+ G CK GS++E
Sbjct: 252 AGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDE 311

Query: 542 ANELLRKMVGD-GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           A +L R+M G  G  P  +T+ ++I    ++G L R  +L   M  KGL+    TY +LI
Sbjct: 312 AEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILI 371

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
              +   +L+ A   + +M+ K    + ++  + + GLC+   IDQAY +F    + G +
Sbjct: 372 AGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAV 431

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           PN  T+ IL       G  ++A +L +    R+I
Sbjct: 432 PNPETFRILSESLIKLGRVEDAQKLMEPAKARDI 465



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 132/402 (32%), Positives = 214/402 (53%), Gaps = 6/402 (1%)

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M K    +   +Y+ ++   ++ G+L +AL + E M +    P+L TYN+LI   C  G 
Sbjct: 1   MSKAKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGE 60

Query: 364 VSDARHRFFEMLR-KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
              A   F  M R K V PD  +YNTL+ G C SGN   A  L  E+R +N+   V TY+
Sbjct: 61  FGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYS 120

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           ++I  L +    E + ++ E M+  G  PDV  +  ++ G  +  N+  ARE +  M+  
Sbjct: 121 SIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVES 180

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML--AKGFPPDLITYNVLVHGLCKLGSLE 540
           G +PD  +Y   I G  K+G   E+ ++  EM   A G+ P++IT++ L+HGLC+ G LE
Sbjct: 181 GYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELE 240

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           +A E+   M+  G  P+  TYT++I        + + R+LF  M +  + P  V Y  LI
Sbjct: 241 KALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLI 300

Query: 601 HAHAARGRLELAFMYFSEMQ-VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
             +  RG ++ A   + EM    G++P ++T+N LI+G C+L ++ +A  L  +M  +G+
Sbjct: 301 AGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGL 360

Query: 660 LPNKYTYTILINENCNAGNWQEALRLYKEMLDRE--IEPDYC 699
             +  TY ILI     A    EAL +YK+M +++  ++P  C
Sbjct: 361 AADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSC 402



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 110/360 (30%), Positives = 189/360 (52%), Gaps = 4/360 (1%)

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
            Y+ ++  L K G ++ A   F  M  ++ +P +++YN L+   C +G  G+A  LF  +
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 410 -RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
            R + + P   TYNTLI GLC  G+ E A++L   M ++ I  +V TY+ ++    K   
Sbjct: 72  KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
              + +   EM+  G  PD FA+   + G  +  +  +A  + + M+  G+ PD ++Y++
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191

Query: 529 LVHGLCKLGSLEEANELLRKMV--GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           L+HGL K+G L+E+ ++L +M     G++P+ IT++++IH     G+L +  ++F +ML 
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 251

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
            G  P   TYT LI       ++  A   F +M    I P+ + YN+LI G C+   +D+
Sbjct: 252 AGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDE 311

Query: 647 AYGLFIDME-EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           A  L+ +M    G+ P   T+  LI+  C  G    A  L  EM  + +  D CT+  L+
Sbjct: 312 AEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILI 371



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 135/459 (29%), Positives = 224/459 (48%), Gaps = 59/459 (12%)

Query: 130 ILEILIESGLLRSAYWVVETV---VCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKK 186
           +++ L ++G+L  A  V ET+    CV      +VLI    ++    K LDL        
Sbjct: 16  VVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDL-------- 67

Query: 187 SMVEQCLLVFNKMLRNGLL-PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVT 245
                    F  M R   + PD    N +I  L  +G +  AR++   M +  I  ++ T
Sbjct: 68  ---------FQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFT 118

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           Y++++ S  KE + +E+ ++L EM   GC+P+   +N ++ GF+R+  +E+AR + + M+
Sbjct: 119 YSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMV 178

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR--GVAPTLATYNILIYGLCKWG- 362
           + G K    SY+ +I G ++ G L E+L +  EM  R  G  P + T++ LI+GLC+ G 
Sbjct: 179 ESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGE 238

Query: 363 ----------------------------------RVSDARHRFFEMLRKNVIPDIISYNT 388
                                             +V  AR  F +M +  + PD ++YN+
Sbjct: 239 LEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNS 298

Query: 389 LLYGYCRSGNIGEAFLLFDELRS-RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
           L+ GYC+ G++ EA  L+ E+     L PT+VT+NTLIDG C+ G L  A +L   M  +
Sbjct: 299 LIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTK 358

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
           G+  D  TY I++ G  +   L  A E + +M  K    D  +  + + G  K G+  +A
Sbjct: 359 GLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQA 418

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
           Y + E     G  P+  T+ +L   L KLG +E+A +L+
Sbjct: 419 YAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLM 457



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 124/414 (29%), Positives = 202/414 (48%), Gaps = 17/414 (4%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           AL  F+ ++ +  V+ D + + T++  L  SG    A  ++          + D  I   
Sbjct: 64  ALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSE--------MRDKNIAAN 115

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
           + +  SI I  L+     K++  E+   V  +M+  G  PDV   N +++    +    K
Sbjct: 116 VFTYSSI-IKSLV-----KEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEK 169

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR--GCSPNGVTYNVL 284
           AREVY+ M E G KP  V+Y+ ++    K G++ E+L++L EM  R  G  PN +T++ L
Sbjct: 170 AREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTL 229

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           I G  R GELE+A  +   ML+ G K + ++Y  +I G      +++A  L E+M    +
Sbjct: 230 IHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACI 289

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLR-KNVIPDIISYNTLLYGYCRSGNIGEAF 403
            P    YN LI G CK G + +A   + EM     + P I+++NTL+ G+C+ G +G A 
Sbjct: 290 PPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRAN 349

Query: 404 LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
            L  E+ ++ L     TY  LI GL R   L+ A ++ + M  +  L D ++    V G 
Sbjct: 350 ELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGL 409

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
           CK GN+  A   F    + G  P+   +       +KLG   +A +L E   A+
Sbjct: 410 CKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKAR 463



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/309 (23%), Positives = 141/309 (45%), Gaps = 38/309 (12%)

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
            Y+ ++  L + G L  A ++ E M ++  +P ++TY +++N  C  G    A + F  M
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 480 LR-KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
            R K ++PDR+                                   TYN L+ GLC  G+
Sbjct: 72  KREKRVEPDRW-----------------------------------TYNTLISGLCSSGN 96

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
            E A +LL +M       +  TY+SII + ++         +   M+  G +P +  +  
Sbjct: 97  TEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNG 156

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF--IDMEE 656
           ++   A    +E A   +  M   G +P+ ++Y+ LI+GL ++ ++D++  +   + M  
Sbjct: 157 VMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRA 216

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVH 716
            G +PN  T++ LI+  C  G  ++AL ++  ML+   +P+  T++ L+      +  + 
Sbjct: 217 AGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQ 276

Query: 717 AVEYLESLT 725
           A E  E +T
Sbjct: 277 ARELFEKMT 285


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 139/473 (29%), Positives = 238/473 (50%), Gaps = 9/473 (1%)

Query: 241 PSI---VTYNTMLDSFCKEGEMQEALELLWEMQGR---GCSPNGVTYNVLITGFSRNGEL 294
           PS+   V+YNT+L + C++G +  AL LL  M         PN ++Y  L+     +   
Sbjct: 51  PSVRDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRA 110

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
            QA GL+R M   G++    +Y  +I G  +   +  A+ L  EM   G+ P +  Y+ L
Sbjct: 111 AQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCL 170

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           ++G CK GR       F EM  + + PD++ Y  L+   CR G + +A  + D +  R L
Sbjct: 171 LHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGL 230

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P VVTYN LI+ +C+ G +  A  L++NM  +G+ PDV+TY  ++ G   +  +  A  
Sbjct: 231 EPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMA 290

Query: 475 FFNEMLR--KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
              EM++    ++PD   + + I G  K+G   +A +++  M   G   +L+ +N+L+ G
Sbjct: 291 LLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGG 350

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           L ++  +++A EL+ +M   G  PD  TY+ +I+   +M  + R     + M  +G+ P 
Sbjct: 351 LLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPE 410

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
            V Y  L+ A   +G +  A   F+EM  +  + +   Y+ +I+G  +      A     
Sbjct: 411 PVHYIPLLKAMCDQGMMGQARDLFNEMD-RNCKLDAAAYSTMIHGAFKSGEKKIAEEFLK 469

Query: 653 DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           DM +EG++P+  TY+I IN    +G+   A R+ K+M      PD     +L+
Sbjct: 470 DMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLI 522



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 142/502 (28%), Positives = 250/502 (49%), Gaps = 11/502 (2%)

Query: 205 LPDVKNC---NRIIKVLRDNGFSVKAREVYRMMGE---FGIKPSIVTYNTMLDSFCKEGE 258
           LP V++    N ++  L   G    A  + R+M        +P+ ++Y T++ + C +  
Sbjct: 50  LPSVRDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRR 109

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
             +A+ LL  MQ  G  P+ VTY  LI G     +++ A  L+ +M + G++ +   Y+ 
Sbjct: 110 AAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSC 169

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           ++ GY + G       + EEM  RG+ P +  Y  LI  LC+ G+V  A      M  + 
Sbjct: 170 LLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERG 229

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
           + P++++YN L+   C+ G++ EA  L   +  + + P VVTYNTLI GL    +++ A 
Sbjct: 230 LEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAM 289

Query: 439 QLKENMINQG---ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            L E M+ QG   + PD++T+  +++G CK+G +  A +    M   G + +  A+   I
Sbjct: 290 ALLEEMM-QGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLI 348

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
            G L++    +A  L +EM + G  PD  TY++L++G CK+  +E A   L +M   G  
Sbjct: 349 GGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGME 408

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           P+ + Y  ++ A  + G + + RDLFN M R         Y+ +IH     G  ++A  +
Sbjct: 409 PEPVHYIPLLKAMCDQGMMGQARDLFNEMDRN-CKLDAAAYSTMIHGAFKSGEKKIAEEF 467

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
             +M  +G+ P+ +TY+  IN   +   +  A  +   M   G +P+   +  LI     
Sbjct: 468 LKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGA 527

Query: 676 AGNWQEALRLYKEMLDREIEPD 697
            G+ ++ L L +EM  +++  D
Sbjct: 528 KGDTEKILELTREMTAKDVALD 549



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 133/444 (29%), Positives = 225/444 (50%), Gaps = 5/444 (1%)

Query: 191 QCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTML 250
           Q + +   M   G+ PDV     +I+ L D      A E+   M E GI+P++V Y+ +L
Sbjct: 112 QAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLL 171

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
             +CK G  +   ++  EM GRG  P+ V Y  LI    R+G++++A  ++  M + GL+
Sbjct: 172 HGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLE 231

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
            +  +YN +I    ++G + EAL+L + M  +GV P + TYN LI GL     + +A   
Sbjct: 232 PNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMAL 291

Query: 371 FFEMLR--KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             EM++    V PD++++N++++G C+ G + +A  +   +        +V +N LI GL
Sbjct: 292 LEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGL 351

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
            R   ++ A +L + M + G+ PD  TY+I++NG CKM  +  A  + +EM  +G++P+ 
Sbjct: 352 LRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEP 411

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             Y   +      G   +A  L  EM  +    D   Y+ ++HG  K G  + A E L+ 
Sbjct: 412 VHYIPLLKAMCDQGMMGQARDLFNEM-DRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKD 470

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M+ +G IPD +TY+  I+   + GDL     +   M   G  P +  +  LI  + A+G 
Sbjct: 471 MIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGD 530

Query: 609 LELAFMYFSEMQVK--GIRPNVIT 630
            E       EM  K   + P +I+
Sbjct: 531 TEKILELTREMTAKDVALDPKIIS 554



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 136/427 (31%), Positives = 215/427 (50%), Gaps = 8/427 (1%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           ++ +   LL  Y K    E    VF +M   G+ PDV     +I  L  +G   KA  V 
Sbjct: 163 NVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVM 222

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
            MM E G++P++VTYN +++S CKEG ++EAL+L   M  +G  P+ VTYN LITG S  
Sbjct: 223 DMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSV 282

Query: 292 GELEQARGLIRDMLKLGLKVSAH--SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
            E+++A  L+ +M++   +V     ++N +I G  + G + +AL +   M   G    L 
Sbjct: 283 LEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLV 342

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
            +N+LI GL +  +V  A     EM    + PD  +Y+ L+ G+C+   +  A     E+
Sbjct: 343 AFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEM 402

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
           R + + P  V Y  L+  +C  G +  A+ L   M     L D   Y+ M++G+ K G  
Sbjct: 403 RHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKL-DAAAYSTMIHGAFKSGEK 461

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
            +A EF  +M+ +GL PD   Y+  I    K GD + A R+ ++M A GF PD+  ++ L
Sbjct: 462 KIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSL 521

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH---ASLEMGDLRRGRDLFNNMLR 586
           + G    G  E+  EL R+M       D    ++I+    AS+E   L +    F+  + 
Sbjct: 522 IQGYGAKGDTEKILELTREMTAKDVALDPKIISTIVTSLGASIEGQKLLQSLPGFDTEIS 581

Query: 587 KG--LSP 591
           KG  +SP
Sbjct: 582 KGDVISP 588



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 185/367 (50%), Gaps = 5/367 (1%)

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVI---PDIISYNTLLYGYCRSGNIGEAFLLF 406
           +YN ++  LC+ G +  A      M  +  +   P+ ISY TL+   C      +A  L 
Sbjct: 58  SYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLL 117

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
             ++   + P VVTY TLI GLC   D++ A +L   M   GI P+V+ Y+ +++G CK 
Sbjct: 118 RSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKT 177

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G      + F EM  +G++PD   YT  I    + G   +A R+ + M  +G  P+++TY
Sbjct: 178 GRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTY 237

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           NVL++ +CK GS+ EA +L + M   G  PD +TY ++I     + ++     L   M++
Sbjct: 238 NVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQ 297

Query: 587 --KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRI 644
               + P L+T+  +IH     G +  A    + M   G R N++ +N LI GL R+ ++
Sbjct: 298 GETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKV 357

Query: 645 DQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
            +A  L  +M   G+ P+ +TY+ILIN  C     + A     EM  + +EP+   +  L
Sbjct: 358 KKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPL 417

Query: 705 LLKQLDK 711
           L    D+
Sbjct: 418 LKAMCDQ 424



 Score = 44.3 bits (103), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 3/101 (2%)

Query: 627 NVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL---PNKYTYTILINENCNAGNWQEAL 683
           + ++YN ++  LCR   +D A  L   M  E  L   PN  +YT L+   C      +A+
Sbjct: 55  DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114

Query: 684 RLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
            L + M D  + PD  T+  L+    D      AVE L  +
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEM 155


>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial; Flags: Precursor
 gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
          Length = 987

 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 159/556 (28%), Positives = 252/556 (45%), Gaps = 68/556 (12%)

Query: 218 LRDNGFSV-----------KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELL 266
           LR +GF++           K RE   ++      P  V Y  ++   C+    +EA++ L
Sbjct: 266 LRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFL 325

Query: 267 WEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEK 326
             M+   C PN VTY+ L+ G     +L + + ++  M+  G   S   +N ++  Y   
Sbjct: 326 NRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTS 385

Query: 327 GLLVEALNLEEEMVTRGVAPTLATYNILIYGLC------KWGRVSDARHRFFEMLRKNVI 380
           G    A  L ++MV  G  P    YNILI  +C          +  A   + EML   V+
Sbjct: 386 GDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVV 445

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
            + I+ ++     C +G   +AF +  E+  +  +P   TY+ +++ LC    +E+A  L
Sbjct: 446 LNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLL 505

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
            E M   G++ DV TYTIMV+  CK G +  AR++FNEM   G  P+   YT  I   LK
Sbjct: 506 FEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLK 565

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG--------- 551
               S A  L E ML++G  P+++TY+ L+ G CK G +E+A ++  +M G         
Sbjct: 566 AKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDM 625

Query: 552 ---------------------DGFI---------------------PDHITYTSIIHASL 569
                                DGF                      P+ I Y ++I    
Sbjct: 626 YFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC 685

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
           ++G L   +++   M   G   TL TY+ LI  +    R +LA    S+M      PNV+
Sbjct: 686 KVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVV 745

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
            Y  +I+GLC++ + D+AY L   MEE+G  PN  TYT +I+     G  +  L L + M
Sbjct: 746 IYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERM 805

Query: 690 LDREIEPDYCTHSALL 705
             + + P+Y T+  L+
Sbjct: 806 GSKGVAPNYVTYRVLI 821



 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 188/688 (27%), Positives = 304/688 (44%), Gaps = 74/688 (10%)

Query: 57  YYKELIISTVE----EKPWAFCNNRWVSDHFQAVVSDPELLVRVLNRIR-EKPRIALRFF 111
           +Y +LI    E    E+   F N    +     VV+   LL   LN+ +  + +  L   
Sbjct: 304 FYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMM 363

Query: 112 RWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVV-CVNMHG--ILDVLIGGGLS 168
                 P  K    +F +++     SG    AY +++ +V C +M G  + ++LIG   S
Sbjct: 364 MMEGCYPSPK----IFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIG---S 416

Query: 169 SCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR 228
            C     L+  LL   +K+        +++ML  G++ +  N +   + L   G   KA 
Sbjct: 417 ICGDKDSLNCDLLDLAEKA--------YSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAF 468

Query: 229 EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
            V R M   G  P   TY+ +L+  C   +M+ A  L  EM+  G   +  TY +++  F
Sbjct: 469 SVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSF 528

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
            + G +EQAR    +M ++G   +  +Y  +I  Y +   +  A  L E M++ G  P +
Sbjct: 529 CKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNI 588

Query: 349 ATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI----------------ISYNTLLYG 392
            TY+ LI G CK G+V  A   F  M     +PD+                ++Y  LL G
Sbjct: 589 VTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDG 648

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
           +C+S  + EA  L D +      P  + Y+ LIDGLC+ G L+ AQ++K  M   G    
Sbjct: 649 FCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPAT 708

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
           + TY+ +++   K+    +A +  ++ML     P+   YT  I G  K+G T EAY+L +
Sbjct: 709 LYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQ 768

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
            M  KG  P+++TY  ++ G   +G +E   ELL +M   G  P+++TY  +I    + G
Sbjct: 769 MMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNG 828

Query: 573 DLRRGRDLFNNM-----------LRK-------------GL---------SPTLVTYTVL 599
            L    +L   M            RK             GL         +P L  Y +L
Sbjct: 829 ALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLL 888

Query: 600 IHAHAARGRLELAFMYFSEMQV--KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           I       RLE+A     E+      +     TYN+LI  LC   +++ A+ LF +M ++
Sbjct: 889 IDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKK 948

Query: 658 GILPNKYTYTILINENCNAGNWQEALRL 685
           G++P   ++  LI          EAL L
Sbjct: 949 GVIPEMQSFCSLIKGLFRNSKISEALLL 976



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 129/468 (27%), Positives = 216/468 (46%), Gaps = 9/468 (1%)

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
           + G K +   YN ++D   ++ + +   E L +++       G   NVL+    RNG   
Sbjct: 158 QIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFS 217

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
            A   +  +     + S  +YN +I  + +   L  A  +  EM    +     T     
Sbjct: 218 IALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFA 277

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
           Y LCK G+    R     +  +N +PD + Y  L+ G C +    EA    + +R+ + +
Sbjct: 278 YSLCKVGK---WREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCL 334

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P VVTY+TL+ G      L   +++   M+ +G  P    +  +V+  C  G+ S A + 
Sbjct: 335 PNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKL 394

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDT------SEAYRLQEEMLAKGFPPDLITYNVL 529
             +M++ G  P    Y   I       D+        A +   EMLA G   + I  +  
Sbjct: 395 LKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSF 454

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
              LC  G  E+A  ++R+M+G GFIPD  TY+ +++       +     LF  M R GL
Sbjct: 455 TRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGL 514

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
              + TYT+++ +    G +E A  +F+EM+  G  PNV+TY ALI+   + +++  A  
Sbjct: 515 VADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANE 574

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           LF  M  EG LPN  TY+ LI+ +C AG  ++A ++++ M   +  PD
Sbjct: 575 LFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPD 622



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 100/379 (26%), Positives = 171/379 (45%), Gaps = 9/379 (2%)

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           N+L+   C+ G  S A      +      P   +YN L+  + ++  +  A L+  E+  
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
            NL     T       LC+ G    A  L E    +  +PD + YT +++G C+      
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEE 320

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A +F N M      P+   Y+T + G L         R+   M+ +G  P    +N LVH
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA------SLEMGDLRRGRDLFNNML 585
             C  G    A +LL+KMV  G +P ++ Y  +I +      SL    L      ++ ML
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEML 440

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
             G+    +  +       + G+ E AF    EM  +G  P+  TY+ ++N LC   +++
Sbjct: 441 AAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKME 500

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            A+ LF +M+  G++ + YTYTI+++  C AG  ++A + + EM +    P+  T++AL+
Sbjct: 501 LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560

Query: 706 LKQLDKDYKVHAVEYLESL 724
              L      +A E  E++
Sbjct: 561 HAYLKAKKVSYANELFETM 579



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 119/250 (47%), Gaps = 39/250 (15%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           V +KML N   P+V     +I  L   G + +A ++ +MM E G +P++VTY  M+D F 
Sbjct: 731 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 790

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
             G+++  LELL  M  +G +PN VTY VLI    +NG L+ A  L+ +M +        
Sbjct: 791 MIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA 850

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA------------------------- 349
            Y  +I G++++   +E+L L +E+     AP L+                         
Sbjct: 851 GYRKVIEGFNKE--FIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEV 908

Query: 350 ------------TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
                       TYN LI  LC   +V  A   F EM +K VIP++ S+ +L+ G  R+ 
Sbjct: 909 ATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNS 968

Query: 398 NIGEAFLLFD 407
            I EA LL D
Sbjct: 969 KISEALLLLD 978


>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 772

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 154/559 (27%), Positives = 287/559 (51%), Gaps = 12/559 (2%)

Query: 90  PELLVRVLNRIREKPRIALRFFRWVETQP---GVKRDEFVFCTILEILIESGLLRSAYWV 146
           P +  RVL++   +P   L FF +++TQ     +K D      ++  L E+    +   +
Sbjct: 56  PHVTYRVLSQPILQPHSCLAFFHFLKTQHSNISLKPDLKAHLILISRLFEARKFATMKSI 115

Query: 147 VETVVCVN-----MHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLR 201
           +  +V  +     +  I+D++      S    K  D+L  + +   + ++ + V++ +  
Sbjct: 116 LNGLVTDSDIECPVSSIVDLV--DEFESHFVEKFCDMLFRVCSDNRLFDETIRVYDYVEE 173

Query: 202 NGLLPDVKNCNRIIKVLRDNG-FSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQ 260
            GL+ + ++C  ++  L+  G      R  +RM+     +  + +   ++D  C+ GE++
Sbjct: 174 KGLVIEERSCFVLLLALKRCGEVDFCVRFFHRMVESNKFEIRVQSLTLVIDVLCRRGEVE 233

Query: 261 EALELLWEMQGRG-CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI 319
           +A EL+ EM G+G   PN  TYN L+  +    + +    +++ M K  +  S  +Y+ +
Sbjct: 234 KAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFSVATYSIL 293

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           I  YS  G + EA  + EEM  + +   +  Y+ +I    + G +  A   F EM ++++
Sbjct: 294 IQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDI 353

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
           +P+  +Y  L+ G C++G +  A +L  E++S+ +   +V +NT +DG CR G ++ A +
Sbjct: 354 VPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALR 413

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           L+  M  +GI  DV TY I+ NG CK+     A+   N M+ KG++P+   +T  I    
Sbjct: 414 LQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYC 473

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           K G+ +EA RL  +M  KG  P++ITYN L+   CK   +++A+++  +M+  G +PD  
Sbjct: 474 KEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLY 533

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
           TY+S+IH    +G +     LFN M  KG++  + TYT +I   +  GR + AF  + EM
Sbjct: 534 TYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDEM 593

Query: 620 QVKGIRPNVITYNALINGL 638
              G+ P+   + +L+   
Sbjct: 594 MKIGLIPDDRVFTSLVGSF 612



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 135/417 (32%), Positives = 216/417 (51%), Gaps = 2/417 (0%)

Query: 283 VLITGFSRNGELEQARGLIRDMLKLG-LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
           VL+    R GE++        M++    ++   S   +I     +G + +A  L +EMV 
Sbjct: 185 VLLLALKRCGEVDFCVRFFHRMVESNKFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVG 244

Query: 342 RG-VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
           +G V P + TYN L+                  M ++ V+  + +Y+ L+  Y  SG+I 
Sbjct: 245 KGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIE 304

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           EA  +F+E+R +N+   V  Y+++I    R G+++ A  L + M  + I+P+  TY  ++
Sbjct: 305 EAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALI 364

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
            G CK G +  A     EM  KG+  +   + T + G  + G   EA RLQ  M  KG  
Sbjct: 365 GGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGIN 424

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
            D+ TYN+L +GLCKL   +EA  +L  MV  G  P+ +T+T  I    + G+L     L
Sbjct: 425 ADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERL 484

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
           F +M +KG  P ++TY  LI A+  + +++ A    SEM  KG+ P++ TY++LI+G C 
Sbjct: 485 FRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECI 544

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           + R+D+A  LF +M  +GI  N  TYT +I+     G   EA +LY EM+   + PD
Sbjct: 545 VGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPD 601



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 55/112 (49%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  Y KK  V+Q   + ++M+  GLLPD+   + +I      G   +A +++  M   G
Sbjct: 503 LIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKG 562

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
           I  ++ TY +M+    KEG   EA +L  EM   G  P+   +  L+  F +
Sbjct: 563 ITRNVATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLVGSFHK 614


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 143/473 (30%), Positives = 254/473 (53%), Gaps = 5/473 (1%)

Query: 191 QCLLVFNKMLRNGLLPDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           + L +F  M+ +  LP + +  +++ V+ +   F V    +   +   G+   + T N +
Sbjct: 55  EALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDV-VINLCDHLQIMGVSHDLYTCNLL 113

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           ++ FC+  +   A   L +M   G  P+ VT+  LI GF     +E+A  ++  M+++G+
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
           K     Y  II    + G +  AL+L ++M   G+ P +  Y  L+ GLC  GR  DA  
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
               M ++ + PD+I++N L+  + + G   +A  L++E+   ++ P + TY +LI+G C
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
             G ++ A+Q+   M  +G  PDV+ YT ++NG CK   +  A + F EM +KGL  +  
Sbjct: 294 MEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI 353

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA---NELL 546
            YTT I G  ++G  + A  +   M+++G PP++ TYNVL+H LC  G +++A    E +
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDM 413

Query: 547 RKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAAR 606
           +K   DG  P+  TY  ++H     G L +   +F +M ++ +   ++TYT++I      
Sbjct: 414 QKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKA 473

Query: 607 GRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           G+++ A   F  +  KG++PNV+TY  +I+GL R     +A+ LF  M+E+G+
Sbjct: 474 GKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 147/488 (30%), Positives = 250/488 (51%), Gaps = 11/488 (2%)

Query: 216 KVLRDNGFSVK---AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR 272
           ++LR+   S++   A +++  M E    PSI+ +  +L+   K  +    + L   +Q  
Sbjct: 42  EILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIM 101

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA 332
           G S +  T N+L+  F ++ +   A   +  M+KLG +    ++  +I G+     + EA
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
           +++  +MV  G+ P +  Y  +I  LCK G V+ A   F +M    + PD++ Y +L+ G
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
            C SG   +A  L   +  R + P V+T+N LID   + G    A++L   MI   I P+
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPN 281

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
           + TYT ++NG C  G +  AR+ F  M  KG  PD  AYT+ I G  K     +A ++  
Sbjct: 282 IFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFY 341

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           EM  KG   + ITY  L+ G  ++G    A E+   MV  G  P+  TY  ++H     G
Sbjct: 342 EMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNG 401

Query: 573 DLRRGRDLFNNMLRK---GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
            +++   +F +M ++   G++P + TY VL+H     G+LE A M F +M+ + +   +I
Sbjct: 402 KVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGII 461

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           TY  +I G+C+  ++  A  LF  +  +G+ PN  TYT +I     +G ++E L+    +
Sbjct: 462 TYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMI-----SGLFREGLKHEAHV 516

Query: 690 LDREIEPD 697
           L R+++ D
Sbjct: 517 LFRKMKED 524



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 122/401 (30%), Positives = 205/401 (51%), Gaps = 13/401 (3%)

Query: 198 KMLRNGLLPDVKNCNRIIKVLRDNGFSV-----KAREVYRMMGEFGIKPSIVTYNTMLDS 252
           KM++ G  PD+     +I     NGF +     +A  +   M E GIKP +V Y T++DS
Sbjct: 132 KMMKLGFEPDIVTFTSLI-----NGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDS 186

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
            CK G +  AL L  +M+  G  P+ V Y  L+ G   +G    A  L+R M K  +K  
Sbjct: 187 LCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPD 246

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
             ++N +I  + ++G  ++A  L  EM+   +AP + TY  LI G C  G V +AR  F+
Sbjct: 247 VITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFY 306

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
            M  K   PD+++Y +L+ G+C+   + +A  +F E+  + L    +TY TLI G  + G
Sbjct: 307 LMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVG 366

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK---GLQPDRF 489
              VAQ++  +M+++G+ P++ TY ++++  C  G +  A   F +M ++   G+ P+ +
Sbjct: 367 KPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIW 426

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
            Y   + G    G   +A  + E+M  +     +ITY +++ G+CK G ++ A  L   +
Sbjct: 427 TYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSL 486

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
              G  P+ +TYT++I      G       LF  M   G+S
Sbjct: 487 PSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 172/343 (50%)

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           + ++A   F  M+    +P II +  LL    +         L D L+   +   + T N
Sbjct: 52  QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            L++  C+     +A      M+  G  PD++T+T ++NG C    +  A    N+M+  
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G++PD   YTT I    K G  + A  L ++M   G  PD++ Y  LV+GLC  G   +A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
           + LLR M      PD IT+ ++I A ++ G      +L+N M+R  ++P + TYT LI+ 
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
               G ++ A   F  M+ KG  P+V+ Y +LING C+ +++D A  +F +M ++G+  N
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             TYT LI      G    A  ++  M+ R + P+  T++ LL
Sbjct: 352 TITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLL 394



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 81/154 (52%), Gaps = 3/154 (1%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF---GIKPSIVTYNTMLD 251
           VF+ M+  G+ P+++  N ++  L  NG   KA  ++  M +    G+ P+I TYN +L 
Sbjct: 374 VFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLH 433

Query: 252 SFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKV 311
             C  G++++AL +  +M+ R      +TY ++I G  + G+++ A  L   +   G+K 
Sbjct: 434 GLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKP 493

Query: 312 SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVA 345
           +  +Y  +I G   +GL  EA  L  +M   GV+
Sbjct: 494 NVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527


>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
 gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
          Length = 432

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 140/418 (33%), Positives = 220/418 (52%), Gaps = 14/418 (3%)

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           + G   +AL+L  E   +    + VTYNVLI GF    +L+ A  L+R+M   G++ +  
Sbjct: 3   RAGSHNQALQLFRENPCQ-LPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDR 61

Query: 315 SYNPIICGYSEKGLLVEAL-NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
           + + I+ G    G + +AL + +  +      P + +Y  LI GLCK GRV  A    F+
Sbjct: 62  TTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAA----FD 117

Query: 374 MLRKNVI-----PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
           + RK V      P+  +YN L+ G C+   +  A  +  E R R+  P VVTYNTL+  L
Sbjct: 118 LFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAAL 177

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
            + G ++ A      M  +G +P ++++  ++ G C+   L+ A E FNEM+ +   P+ 
Sbjct: 178 FQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNL 237

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             Y+  I G  K     EA +L + M+++G  PDL+ Y  LV G    G L+ A  LLR+
Sbjct: 238 VTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRR 297

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           MV  G IPD +TYT +I    ++G +    ++F  ++    SP +VTY+ LI  +    R
Sbjct: 298 MVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASR 357

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
           ++       EM     RPNV+TYN +I GL  + R ++AYG+F +M E G +P+  TY
Sbjct: 358 VDEGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTY 412



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 130/410 (31%), Positives = 211/410 (51%), Gaps = 8/410 (1%)

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           +  S VTYN ++  FC   ++  A  LL EM   G   N  T ++++ G  R G + QA 
Sbjct: 21  LPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQAL 80

Query: 299 GLIRDMLKLG-LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG-VAPTLATYNILIY 356
                 L+L   +    SY  +I G  + G +  A +L  +MV  G   P   TYN L+ 
Sbjct: 81  EHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVD 140

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           GLCK  R+  AR    E  +++  PD+++YNTL+    + G + EA   F ++     VP
Sbjct: 141 GLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVP 200

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
           T+V++N +I GLCR   L  A ++   MI++   P+++TY+++++G CK   L  A++  
Sbjct: 201 TLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLL 260

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           + M+ +G +PD  AYT  + G    G    A  L   M+++G  PD++TY V++  LCK+
Sbjct: 261 DRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKV 320

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G +++A+E+ R++V +   P+ +TY+++I        +  G  +   M      P +VTY
Sbjct: 321 GRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTY 377

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
             +I   +   R E A+  F EM   G  P+  TY  L      LR IDQ
Sbjct: 378 NTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRA---LRMIDQ 424



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 115/373 (30%), Positives = 191/373 (51%), Gaps = 7/373 (1%)

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFD-E 408
           TYN+LI G C    +  A     EM  + +  +  + + +L G CR G + +A   FD  
Sbjct: 27  TYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDAS 86

Query: 409 LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG-ILPDVITYTIMVNGSCKMG 467
           L   +  P VV+Y TLI+GLC+ G ++ A  L   M+  G   P+  TY  +V+G CK  
Sbjct: 87  LELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQD 146

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
            L  AR    E  ++   PD   Y T +A   +LG   EA     +M  +G+ P L+++N
Sbjct: 147 RLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFN 206

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
            ++ GLC+   L +A E+  +M+   F P+ +TY+ +I    +   L   + L + M+ +
Sbjct: 207 AIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSE 266

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
           G  P LV YT L+   +A GRL+ A      M  +G  P+V+TY  +I+ LC++ R+D A
Sbjct: 267 GCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDA 326

Query: 648 YGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL-- 705
           + +F ++      PN  TY+ LI   C A    E  ++ +EM  R   P+  T++ ++  
Sbjct: 327 HEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMACR---PNVVTYNTMIWG 383

Query: 706 LKQLDKDYKVHAV 718
           L  +D++ + + +
Sbjct: 384 LSMVDRNEEAYGM 396



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 98/329 (29%), Positives = 165/329 (50%), Gaps = 4/329 (1%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYR-MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALE 264
           PDV +   +I  L   G    A +++R M+   G +P+  TYN ++D  CK+  +  A  
Sbjct: 94  PDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARA 153

Query: 265 LLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYS 324
           ++ E + R  +P+ VTYN L+    + G +++A      M + G   +  S+N II G  
Sbjct: 154 VITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLC 213

Query: 325 EKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDII 384
               L +AL +  EM+ R   P L TY+++I GLCK  ++ +A+     M+ +   PD++
Sbjct: 214 RARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLV 273

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
           +Y  L+ G+  +G +  A  L   + S+  +P VVTY  +ID LC+ G ++ A ++   +
Sbjct: 274 AYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFREL 333

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
           +     P+V+TY+ ++ G C+   +    +   EM     +P+   Y T I G   +   
Sbjct: 334 VANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSMVDRN 390

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
            EAY +  EM   GF PD  TY  L   L
Sbjct: 391 EEAYGMFREMSECGFVPDARTYRGLKRAL 419



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 143/272 (52%), Gaps = 3/272 (1%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K+  ++    V  +  +    PDV   N ++  L   G   +A   +  M E G  P++V
Sbjct: 144 KQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLV 203

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           ++N ++   C+   + +ALE+  EM  R   PN VTY+V+I G  ++ +L++A+ L+  M
Sbjct: 204 SFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRM 263

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           +  G +    +Y P++ G+S  G L  AL L   MV++G  P + TY ++I  LCK GRV
Sbjct: 264 VSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRV 323

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            DA   F E++     P++++Y+ L+ GYCR+  + E   +  E+  R   P VVTYNT+
Sbjct: 324 DDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMACR---PNVVTYNTM 380

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
           I GL      E A  +   M   G +PD  TY
Sbjct: 381 IWGLSMVDRNEEAYGMFREMSECGFVPDARTY 412



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 70/138 (50%), Gaps = 3/138 (2%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+L ++    ++  L +  +M+  G +PDV     +I  L   G    A E++R +    
Sbjct: 278 LVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANK 337

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
             P++VTY+ ++  +C+   + E  +++ EM    C PN VTYN +I G S     E+A 
Sbjct: 338 CSPNVVTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEEAY 394

Query: 299 GLIRDMLKLGLKVSAHSY 316
           G+ R+M + G    A +Y
Sbjct: 395 GMFREMSECGFVPDARTY 412



 Score = 48.1 bits (113), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 1/78 (1%)

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
           +TYN LI G C    +D A+ L  +M+ EG+  N  T +I++   C  G   +AL  +  
Sbjct: 26  VTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDA 85

Query: 689 MLD-REIEPDYCTHSALL 705
            L+    +PD  +++ L+
Sbjct: 86  SLELAHAQPDVVSYTTLI 103


>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
 gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
          Length = 670

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 159/549 (28%), Positives = 265/549 (48%), Gaps = 60/549 (10%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMGEFGIKPSI 243
           K+ + E+C +V  K      LP+                  KA +++ RM  EF  K + 
Sbjct: 120 KRVIFEKCFIVIFKAYGKAHLPE------------------KAVDLFDRMACEFECKRTG 161

Query: 244 VTYNTMLDSFCKEGEMQEALEL---LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
            ++N++L+   +EG    ALE    +   +G   SPN +T+N++I               
Sbjct: 162 KSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVI--------------- 206

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
            + M K+GL                   + +A+ +  +M  R   P + TY  L+ GLCK
Sbjct: 207 -KAMCKVGL-------------------VDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCK 246

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
             R+ +A     EM      P  +++N L+ G C+ G++  A  L D +  +  +P  VT
Sbjct: 247 ADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVT 306

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YNTLI GLC  G LE A  L + M++   +P+V+TY  ++NG  K G           M 
Sbjct: 307 YNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALME 366

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            +G   + + Y+T I+G  K G + EA  L +EM  KG+  + I Y+ ++ GLC+ G  +
Sbjct: 367 ERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPD 426

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           +A E+L +M   G  P+  T +S++    E G+  R  +++ +M +   +   V Y+VLI
Sbjct: 427 DAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLI 486

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG-- 658
           H     G+++ A M +++M  KG +P+V+ Y+++INGL     ++ A  L+ +M  +G  
Sbjct: 487 HGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPD 546

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDK-DYKVHA 717
             P+  TY IL+N  C   +   A+ L   MLDR  +PD  T +  L    +K D     
Sbjct: 547 SQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRMLREKLDPPQDG 606

Query: 718 VEYLESLTL 726
            E+L+ L +
Sbjct: 607 REFLDELVV 615



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 129/468 (27%), Positives = 236/468 (50%), Gaps = 16/468 (3%)

Query: 174 KILDLLLLIYTKKSMVEQCLLVFNKML------RNGLLPDVKNCNRIIKVLRDNGFSVKA 227
           K   ++   Y K  + E+ + +F++M       R G     K+ N ++ V+   G   +A
Sbjct: 126 KCFIVIFKAYGKAHLPEKAVDLFDRMACEFECKRTG-----KSFNSVLNVIIQEGLFHRA 180

Query: 228 REVY-RMMGEFG--IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVL 284
            E Y  ++G  G  I P+++T+N ++ + CK G + +A+++  +M  R C P+  TY  L
Sbjct: 181 LEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTL 240

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           + G  +   +++A  L+ +M   G   S  ++N +I G  +KG L  A  L + M  +G 
Sbjct: 241 MDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGC 300

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
            P   TYN LI+GLC  G++  A      M+    +P++++Y T++ G  + G   +   
Sbjct: 301 IPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGAC 360

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
           +   +  R        Y+TLI GL + G  + A  L + M  +G   + I Y+ +++G C
Sbjct: 361 VLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLC 420

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
           + G    A E  +EM  KG  P+ +  ++ + G  + G++  A  + ++M    F  + +
Sbjct: 421 RDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEV 480

Query: 525 TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM 584
            Y+VL+HGLCK G ++EA  +  +M+G G  PD + Y+S+I+     G +     L+N M
Sbjct: 481 CYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEM 540

Query: 585 LRKG--LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
           L +G    P +VTY +L++    +  +  A    + M  +G  P+++T
Sbjct: 541 LCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVT 588



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 142/477 (29%), Positives = 224/477 (46%), Gaps = 53/477 (11%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P+V   N +IK +   G    A +V+R M     +P + TY T++D  CK   + EA+ L
Sbjct: 197 PNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSL 256

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           L EMQ  GC P+ VT+NVLI G  + G+L +A  L+ +M   G   +  +YN +I G   
Sbjct: 257 LDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCL 316

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
           KG L +A++L + MV+    P + TY  +I GL K GR  D       M  +    +   
Sbjct: 317 KGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYV 376

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           Y+TL+ G  + G   EA  LF E+  +      + Y+ +IDGLCR G  + A ++   M 
Sbjct: 377 YSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMT 436

Query: 446 NQGILPDVIT-----------------------------------YTIMVNGSCKMGNLS 470
           N+G  P+  T                                   Y+++++G CK G + 
Sbjct: 437 NKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVK 496

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG--FPPDLITYNV 528
            A   + +ML KG +PD  AY++ I G    G   +A +L  EML +G    PD++TYN+
Sbjct: 497 EAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNI 556

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD-LRRGRDLFNNMLRK 587
           L++ LCK  S+  A +LL  M+  G  PD +T T  +    E  D  + GR+  + ++ +
Sbjct: 557 LLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRMLREKLDPPQDGREFLDELVVR 616

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRI 644
            L                R R+  A      M  K + P   T+  ++  LC+ +++
Sbjct: 617 LLK---------------RQRVLGASKIVEVMLQKLLPPKHSTWARVVENLCKPKKV 658



 Score = 42.4 bits (98), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 36/171 (21%), Positives = 74/171 (43%), Gaps = 4/171 (2%)

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
           T+ S+I+    +GD +    + + M  +        + V+  A+      E A   F  M
Sbjct: 92  TFYSLINNYANLGDFKSLEKVLDRMKCEKRVIFEKCFIVIFKAYGKAHLPEKAVDLFDRM 151

Query: 620 QVK-GIRPNVITYNALINGLCR---LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
             +   +    ++N+++N + +     R  + Y   I  +   I PN  T+ ++I   C 
Sbjct: 152 ACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCK 211

Query: 676 AGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
            G   +A++++++M  R+ EPD  T+  L+      D    AV  L+ + +
Sbjct: 212 VGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQI 262


>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 997

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 159/556 (28%), Positives = 252/556 (45%), Gaps = 68/556 (12%)

Query: 218 LRDNGFSV-----------KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELL 266
           LR +GF++           K RE   ++      P  V Y  ++   C+    +EA++ L
Sbjct: 266 LRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFL 325

Query: 267 WEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEK 326
             M+   C PN VTY+ L+ G     +L + + ++  M+  G   S   +N ++  Y   
Sbjct: 326 NRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTS 385

Query: 327 GLLVEALNLEEEMVTRGVAPTLATYNILIYGLC------KWGRVSDARHRFFEMLRKNVI 380
           G    A  L ++MV  G  P    YNILI  +C          +  A   + EML   V+
Sbjct: 386 GDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVV 445

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
            + I+ ++     C +G   +AF +  E+  +  +P   TY+ +++ LC    +E+A  L
Sbjct: 446 LNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLL 505

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
            E M   G++ DV TYTIMV+  CK G +  AR++FNEM   G  P+   YT  I   LK
Sbjct: 506 FEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLK 565

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG--------- 551
               S A  L E ML++G  P+++TY+ L+ G CK G +E+A ++  +M G         
Sbjct: 566 AKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDM 625

Query: 552 ---------------------DGFI---------------------PDHITYTSIIHASL 569
                                DGF                      P+ I Y ++I    
Sbjct: 626 YFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC 685

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
           ++G L   +++   M   G   TL TY+ LI  +    R +LA    S+M      PNV+
Sbjct: 686 KVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVV 745

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
            Y  +I+GLC++ + D+AY L   MEE+G  PN  TYT +I+     G  +  L L + M
Sbjct: 746 IYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERM 805

Query: 690 LDREIEPDYCTHSALL 705
             + + P+Y T+  L+
Sbjct: 806 GSKGVAPNYVTYRVLI 821



 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 190/698 (27%), Positives = 308/698 (44%), Gaps = 74/698 (10%)

Query: 57  YYKELIISTVE----EKPWAFCNNRWVSDHFQAVVSDPELLVRVLNRIR-EKPRIALRFF 111
           +Y +LI    E    E+   F N    +     VV+   LL   LN+ +  + +  L   
Sbjct: 304 FYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMM 363

Query: 112 RWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVV-CVNMHG--ILDVLIGGGLS 168
                 P  K    +F +++     SG    AY +++ +V C +M G  + ++LIG   S
Sbjct: 364 MMEGCYPSPK----IFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIG---S 416

Query: 169 SCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR 228
            C     L+  LL   +K+        +++ML  G++ +  N +   + L   G   KA 
Sbjct: 417 ICGDKDSLNCDLLDLAEKA--------YSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAF 468

Query: 229 EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
            V R M   G  P   TY+ +L+  C   +M+ A  L  EM+  G   +  TY +++  F
Sbjct: 469 SVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSF 528

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
            + G +EQAR    +M ++G   +  +Y  +I  Y +   +  A  L E M++ G  P +
Sbjct: 529 CKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNI 588

Query: 349 ATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI----------------ISYNTLLYG 392
            TY+ LI G CK G+V  A   F  M     +PD+                ++Y  LL G
Sbjct: 589 VTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDG 648

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
           +C+S  + EA  L D +      P  + Y+ LIDGLC+ G L+ AQ++K  M   G    
Sbjct: 649 FCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPAT 708

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
           + TY+ +++   K+    +A +  ++ML     P+   YT  I G  K+G T EAY+L +
Sbjct: 709 LYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQ 768

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
            M  KG  P+++TY  ++ G   +G +E   ELL +M   G  P+++TY  +I    + G
Sbjct: 769 MMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNG 828

Query: 573 DLRRGRDLFNNM-----------LRK-------------GL---------SPTLVTYTVL 599
            L    +L   M            RK             GL         +P L  Y +L
Sbjct: 829 ALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLL 888

Query: 600 IHAHAARGRLELAFMYFSEMQV--KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           I       RLE+A     E+      +     TYN+LI  LC   +++ A+ LF +M ++
Sbjct: 889 IDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKK 948

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIE 695
           G++P   ++  LI          EAL L   +   EI+
Sbjct: 949 GVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMEIQ 986



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 129/468 (27%), Positives = 216/468 (46%), Gaps = 9/468 (1%)

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
           + G K +   YN ++D   ++ + +   E L +++       G   NVL+    RNG   
Sbjct: 158 QIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFS 217

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
            A   +  +     + S  +YN +I  + +   L  A  +  EM    +     T     
Sbjct: 218 IALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFA 277

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
           Y LCK G+    R     +  +N +PD + Y  L+ G C +    EA    + +R+ + +
Sbjct: 278 YSLCKVGK---WREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCL 334

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P VVTY+TL+ G      L   +++   M+ +G  P    +  +V+  C  G+ S A + 
Sbjct: 335 PNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKL 394

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDT------SEAYRLQEEMLAKGFPPDLITYNVL 529
             +M++ G  P    Y   I       D+        A +   EMLA G   + I  +  
Sbjct: 395 LKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSF 454

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
              LC  G  E+A  ++R+M+G GFIPD  TY+ +++       +     LF  M R GL
Sbjct: 455 TRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGL 514

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
              + TYT+++ +    G +E A  +F+EM+  G  PNV+TY ALI+   + +++  A  
Sbjct: 515 VADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANE 574

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           LF  M  EG LPN  TY+ LI+ +C AG  ++A ++++ M   +  PD
Sbjct: 575 LFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPD 622



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 100/379 (26%), Positives = 171/379 (45%), Gaps = 9/379 (2%)

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           N+L+   C+ G  S A      +      P   +YN L+  + ++  +  A L+  E+  
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
            NL     T       LC+ G    A  L E    +  +PD + YT +++G C+      
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEE 320

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A +F N M      P+   Y+T + G L         R+   M+ +G  P    +N LVH
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA------SLEMGDLRRGRDLFNNML 585
             C  G    A +LL+KMV  G +P ++ Y  +I +      SL    L      ++ ML
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEML 440

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
             G+    +  +       + G+ E AF    EM  +G  P+  TY+ ++N LC   +++
Sbjct: 441 AAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKME 500

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            A+ LF +M+  G++ + YTYTI+++  C AG  ++A + + EM +    P+  T++AL+
Sbjct: 501 LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560

Query: 706 LKQLDKDYKVHAVEYLESL 724
              L      +A E  E++
Sbjct: 561 HAYLKAKKVSYANELFETM 579


>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 506

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 148/501 (29%), Positives = 248/501 (49%), Gaps = 1/501 (0%)

Query: 198 KMLRNGLLP-DVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKE 256
           +M R+G  P +  + N +I  +   G    A EV+  M E  + P+ +TYNTM+D   K 
Sbjct: 4   RMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKG 63

Query: 257 GEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSY 316
           G+++    L  +M   G  PN +TYNVL++G  R G + +   L+ +M    +     +Y
Sbjct: 64  GDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTY 123

Query: 317 NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
           + +  G S  G     L+L  + +  GV     T +IL+ GLCK G+VS A      ++ 
Sbjct: 124 SILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVN 183

Query: 377 KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
             ++P  + YNTL+ GYC++G +  AF  F +++SR++ P  +TYN LI+GLC+   +  
Sbjct: 184 AGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITN 243

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
           AQ L   M + G+ P V T+  +++   + G L       +EM   GL+P+  +Y + + 
Sbjct: 244 AQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVN 303

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
              K G   EA  + ++M  K   P+   YN ++    + G  ++A  L+ KM  +G  P
Sbjct: 304 AFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISP 363

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
             +TY  +I        +    ++ N++    L P  V+Y  LI A   RG ++ A    
Sbjct: 364 SIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQ 423

Query: 617 SEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNA 676
             M   GI+  V TY+ LI+GL    R+++   L+  M +  ++P+   + I++      
Sbjct: 424 QRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKY 483

Query: 677 GNWQEALRLYKEMLDREIEPD 697
           GN  +A  L KEML +    D
Sbjct: 484 GNEIKAEDLRKEMLQKRNNHD 504



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 146/475 (30%), Positives = 232/475 (48%), Gaps = 1/475 (0%)

Query: 232 RMMGEFGIKP-SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
           R MG  G  P +  +YN ++    + G   +A+E+  EM  R   PN +TYN +I G  +
Sbjct: 3   RRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIK 62

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
            G+LE    L   M+  GLK +A +YN ++ G    G + E   L +EM ++ + P   T
Sbjct: 63  GGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFT 122

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           Y+IL  GL + G        F + L+  V     + + LL G C+ G +  A  +   L 
Sbjct: 123 YSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLV 182

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
           +  LVPT V YNTLI+G C+ G+LE A      M ++ I PD ITY  ++NG CK   ++
Sbjct: 183 NAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERIT 242

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            A++   EM   G+ P    + T I    + G   + + +  EM   G  P++++Y  +V
Sbjct: 243 NAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIV 302

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
           +  CK G + EA  +L  M     +P+   Y +II A +E G   +   L   M   G+S
Sbjct: 303 NAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGIS 362

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           P++VTY +LI     + ++  A    + +    + P+ ++YN LI+  C    ID+A  L
Sbjct: 363 PSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDL 422

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
              M + GI     TY  LI+    AG   E   LY++M+   + P    H+ ++
Sbjct: 423 QQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMV 477



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 117/380 (30%), Positives = 199/380 (52%)

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P   +YN++I G+ + GR  DA   F EM  + V+P+ I+YNT++ G+ + G++   F L
Sbjct: 13  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
            D++    L P  +TYN L+ GLCR G +     L + M +Q ++PD  TY+I+ +G  +
Sbjct: 73  RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 132

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
            G+       F + L+ G+    +  +  + G  K G  S A  + + ++  G  P  + 
Sbjct: 133 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 192

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           YN L++G C+ G LE A     +M      PDHITY ++I+   +   +   +DL   M 
Sbjct: 193 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 252

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
             G++PT+ T+  LI A+   G+LE  F+  SEMQ  G++PNV++Y +++N  C+  +I 
Sbjct: 253 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 312

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +A  +  DM  + +LPN   Y  +I+     G   +A  L ++M    I P   T++ L+
Sbjct: 313 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 372

Query: 706 LKQLDKDYKVHAVEYLESLT 725
               ++     A E + SL+
Sbjct: 373 KGLCNQSQISEAEEIINSLS 392



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 125/463 (26%), Positives = 202/463 (43%), Gaps = 70/463 (15%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           VF++M    +LP+    N +I      G       +   M   G+KP+ +TYN +L   C
Sbjct: 37  VFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLC 96

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           + G M E   LL EM  +   P+G TY++L  G SRNG+ +    L    LK G+ +  +
Sbjct: 97  RAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDY 156

Query: 315 S-----------------------------------YNPIICGYSEKGLLVEALNLEEEM 339
           +                                   YN +I GY + G L  A +   +M
Sbjct: 157 TCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM 216

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
            +R + P   TYN LI GLCK  R+++A+    EM    V P + ++NTL+  Y R+G +
Sbjct: 217 KSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQL 276

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ-------------------- 439
            + F++  E++   L P VV+Y ++++  C+ G +  A                      
Sbjct: 277 EKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAI 336

Query: 440 ---------------LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
                          L E M + GI P ++TY +++ G C    +S A E  N +    L
Sbjct: 337 IDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRL 396

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            PD  +Y T I+     G+  +A  LQ+ M   G    + TY+ L+ GL   G L E   
Sbjct: 397 IPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEY 456

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
           L +KM+ +  +P +  +  ++ A  + G+  +  DL   ML+K
Sbjct: 457 LYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 499



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/459 (25%), Positives = 227/459 (49%), Gaps = 27/459 (5%)

Query: 116 TQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGI------LDVLIGG---- 165
           T+  V  +   + T+++  I+ G L + + + + +VC   HG+       +VL+ G    
Sbjct: 42  TERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVC---HGLKPNAITYNVLLSGLCRA 98

Query: 166 ---GLSSCV-----SIKIL------DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNC 211
              G +S +     S K++       +L    ++    +  L +F K L+NG+      C
Sbjct: 99  GRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTC 158

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
           + ++  L  +G    A EV + +   G+ P+ V YNT+++ +C+ GE++ A     +M+ 
Sbjct: 159 SILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKS 218

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
           R   P+ +TYN LI G  +   +  A+ L+ +M   G+  +  ++N +I  Y   G L +
Sbjct: 219 RHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEK 278

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
              +  EM   G+ P + +Y  ++   CK G++ +A     +M  K+V+P+   YN ++ 
Sbjct: 279 CFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIID 338

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
            Y   G   +AF+L ++++S  + P++VTYN LI GLC    +  A+++  ++ N  ++P
Sbjct: 339 AYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIP 398

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           D ++Y  +++  C  GN+  A +    M + G++     Y   I+G    G  +E   L 
Sbjct: 399 DAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLY 458

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           ++M+     P    +N++V    K G+  +A +L ++M+
Sbjct: 459 QKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEML 497


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 143/504 (28%), Positives = 254/504 (50%), Gaps = 15/504 (2%)

Query: 188 MVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEFGIKPSIVTY 246
           +V+  +L FN+M +    P +   N+I+  L +          +   M   G+KP + T 
Sbjct: 46  VVDNAVLSFNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTL 105

Query: 247 NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
           + +++ +C  G+M  A  +  +              +L  G   NG++ +A      +L 
Sbjct: 106 SILINCYCHLGQMTFAFSVFAK--------------ILKMGLCLNGKVNEALLFHDHVLA 151

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
           LG  ++  +Y  +I G  + G    AL +  ++  + V   +  Y+ +I GLCK   V+D
Sbjct: 152 LGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTD 211

Query: 367 ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
           A   + EM+ K + P ++++++L+YG+C  G   +AF LF+E+  +N+ P   T+N L+D
Sbjct: 212 AYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVD 271

Query: 427 GLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
            LC+ G ++ A+ +   M+ +G+ P V+TY  +++G C +  +  A+   + + R  + P
Sbjct: 272 ALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAP 331

Query: 487 DRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
           +  +Y   I G  K+    EA  L  EM  +G  P  +TYN L+ GLCK G +  A EL+
Sbjct: 332 NSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELV 391

Query: 547 RKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAAR 606
            +M  +    D +TY S+I    +   + +   L   +   G+ P + TY +LI      
Sbjct: 392 DEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKG 451

Query: 607 GRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
           G+L+ A   F ++ +KG   N  TYN +INGLC+    D+A  L   ME+ GI+P+  TY
Sbjct: 452 GQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTY 511

Query: 667 TILINENCNAGNWQEALRLYKEML 690
             +I    +    ++A +L +EM+
Sbjct: 512 ETIIQALFHKDENEKAQKLLREMV 535



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 144/508 (28%), Positives = 249/508 (49%), Gaps = 16/508 (3%)

Query: 221 NGFSV-KAREVYRMMGEFGIKPSIVTYNTMLDSFCK-EGEMQEALELLWEMQGRGCSPNG 278
           NGF V  A   +  M +    PSIV +N +L    K +      L L  +M+ +G  P+ 
Sbjct: 43  NGFVVDNAVLSFNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDL 102

Query: 279 VTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
            T ++LI  +   G++  A  +   +LK+GL ++              G + EAL   + 
Sbjct: 103 FTLSILINCYCHLGQMTFAFSVFAKILKMGLCLN--------------GKVNEALLFHDH 148

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
           ++  G      TY ILI GLCK G+   A     ++  K V  +++ Y+T++ G C+   
Sbjct: 149 VLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKL 208

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           + +A+ L+ E+  + + PTVVT+++LI G C  G  + A +L   M+ + I PD  T+ I
Sbjct: 209 VTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNI 268

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           +V+  CK G +  A+     M+++G++P    Y T + G   + +  +A  +   +    
Sbjct: 269 LVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMR 328

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
             P+  +YN++++G CK+  ++EA  L  +M   G  P  +TY S+I    + G +    
Sbjct: 329 VAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAW 388

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           +L + M    +   +VTY  LI        ++ A     +++  GI+PN+ TYN LI+GL
Sbjct: 389 ELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGL 448

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
           C+  ++  A  +F D+  +G   N +TY I+IN  C  G + EA  L  +M D  I PD 
Sbjct: 449 CKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDA 508

Query: 699 CTHSALLLKQLDKDYKVHAVEYLESLTL 726
            T+  ++     KD    A + L  + +
Sbjct: 509 VTYETIIQALFHKDENEKAQKLLREMVI 536



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 144/305 (47%), Gaps = 26/305 (8%)

Query: 103 KPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVE---------TVVCV 153
           K + A R F  +     +  D + F  +++ L + G ++ A  V+          TVV  
Sbjct: 243 KFKDAFRLFNEM-VMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTY 301

Query: 154 N--MHGILDVLIGGGLSSCVSI----------KILDLLLLIYTKKSMVEQCLLVFNKMLR 201
           N  M G   V   G     +SI          +  ++++  + K  MV++ L +F++M  
Sbjct: 302 NTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCC 361

Query: 202 NGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQE 261
            G+ P     N +I  L   G    A E+   M    I   IVTYN+++D FCK   + +
Sbjct: 362 RGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDK 421

Query: 262 ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC 321
           A+ L+ +++  G  PN  TYN+LI G  + G+L+ A+ + +D+L  G  V+A +YN +I 
Sbjct: 422 AIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMIN 481

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           G  ++GL  EA  L  +M   G+ P   TY  +I  L       D   +  ++LR+ VI 
Sbjct: 482 GLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFH----KDENEKAQKLLREMVIK 537

Query: 382 DIISY 386
            ++ Y
Sbjct: 538 GVVVY 542



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 101/206 (49%), Gaps = 18/206 (8%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKIL-- 176
           G+   +  + ++++ L ++G +  A+ +V+      MH           ++C+   I+  
Sbjct: 363 GIAPHKVTYNSLIDGLCKAGRIPYAWELVD-----EMH-----------NNCIPADIVTY 406

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           + L+ ++ K   V++ + +  K+  +G+ P++   N +I  L   G    A++V++ +  
Sbjct: 407 NSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLI 466

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G   +  TYN M++  CKEG   EA  LL +M+  G  P+ VTY  +I       E E+
Sbjct: 467 KGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEK 526

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICG 322
           A+ L+R+M+  G+ V A      + G
Sbjct: 527 AQKLLREMVIKGVVVYAFEIRRTLVG 552


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 148/501 (29%), Positives = 248/501 (49%), Gaps = 1/501 (0%)

Query: 198 KMLRNGLLP-DVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKE 256
           +M R+G  P +  + N +I  +   G    A EV+  M E  + P+ +TYNTM+D   K 
Sbjct: 52  RMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKG 111

Query: 257 GEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSY 316
           G+++    L  +M   G  PN +TYNVL++G  R G + +   L+ +M    +     +Y
Sbjct: 112 GDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTY 171

Query: 317 NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
           + +  G S  G     L+L  + +  GV     T +IL+ GLCK G+VS A      ++ 
Sbjct: 172 SILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVN 231

Query: 377 KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
             ++P  + YNTL+ GYC++G +  AF  F +++SR++ P  +TYN LI+GLC+   +  
Sbjct: 232 AGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITN 291

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
           AQ L   M + G+ P V T+  +++   + G L       +EM   GL+P+  +Y + + 
Sbjct: 292 AQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVN 351

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
              K G   EA  + ++M  K   P+   YN ++    + G  ++A  L+ KM  +G  P
Sbjct: 352 AFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISP 411

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
             +TY  +I        +    ++ N++    L P  V+Y  LI A   RG ++ A    
Sbjct: 412 SIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQ 471

Query: 617 SEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNA 676
             M   GI+  V TY+ LI+GL    R+++   L+  M +  ++P+   + I++      
Sbjct: 472 QRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKY 531

Query: 677 GNWQEALRLYKEMLDREIEPD 697
           GN  +A  L KEML +    D
Sbjct: 532 GNEIKAEDLRKEMLQKRNNHD 552



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 153/512 (29%), Positives = 245/512 (47%), Gaps = 1/512 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKP-SIVTYNTMLDSF 253
            F  +   G  PD    N+ ++     G   +A  + R MG  G  P +  +YN ++   
Sbjct: 14  AFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGM 73

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
            + G   +A+E+  EM  R   PN +TYN +I G  + G+LE    L   M+  GLK +A
Sbjct: 74  WRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNA 133

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
            +YN ++ G    G + E   L +EM ++ + P   TY+IL  GL + G        F +
Sbjct: 134 ITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGK 193

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
            L+  V     + + LL G C+ G +  A  +   L +  LVPT V YNTLI+G C+ G+
Sbjct: 194 YLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGE 253

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           LE A      M ++ I PD ITY  ++NG CK   ++ A++   EM   G+ P    + T
Sbjct: 254 LEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNT 313

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            I    + G   + + +  EM   G  P++++Y  +V+  CK G + EA  +L  M    
Sbjct: 314 LIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKD 373

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
            +P+   Y +II A +E G   +   L   M   G+SP++VTY +LI     + ++  A 
Sbjct: 374 VLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAE 433

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
              + +    + P+ ++YN LI+  C    ID+A  L   M + GI     TY  LI+  
Sbjct: 434 EIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGL 493

Query: 674 CNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             AG   E   LY++M+   + P    H+ ++
Sbjct: 494 GGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMV 525



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 129/439 (29%), Positives = 223/439 (50%), Gaps = 4/439 (0%)

Query: 288 FSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPT 347
             R+ ++ +A G+   +   G +    ++N  +      G L EA+ +   M   G  P 
Sbjct: 5   LGRHADVRRAFGI---LASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPP 61

Query: 348 LA-TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
            A +YN++I G+ + GR  DA   F EM  + V+P+ I+YNT++ G+ + G++   F L 
Sbjct: 62  NAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLR 121

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
           D++    L P  +TYN L+ GLCR G +     L + M +Q ++PD  TY+I+ +G  + 
Sbjct: 122 DQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRN 181

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G+       F + L+ G+    +  +  + G  K G  S A  + + ++  G  P  + Y
Sbjct: 182 GDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIY 241

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           N L++G C+ G LE A     +M      PDHITY ++I+   +   +   +DL   M  
Sbjct: 242 NTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQD 301

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
            G++PT+ T+  LI A+   G+LE  F+  SEMQ  G++PNV++Y +++N  C+  +I +
Sbjct: 302 NGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPE 361

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
           A  +  DM  + +LPN   Y  +I+     G   +A  L ++M    I P   T++ L+ 
Sbjct: 362 AVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIK 421

Query: 707 KQLDKDYKVHAVEYLESLT 725
              ++     A E + SL+
Sbjct: 422 GLCNQSQISEAEEIINSLS 440



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 125/463 (26%), Positives = 202/463 (43%), Gaps = 70/463 (15%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           VF++M    +LP+    N +I      G       +   M   G+KP+ +TYN +L   C
Sbjct: 85  VFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLC 144

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           + G M E   LL EM  +   P+G TY++L  G SRNG+ +    L    LK G+ +  +
Sbjct: 145 RAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDY 204

Query: 315 S-----------------------------------YNPIICGYSEKGLLVEALNLEEEM 339
           +                                   YN +I GY + G L  A +   +M
Sbjct: 205 TCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM 264

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
            +R + P   TYN LI GLCK  R+++A+    EM    V P + ++NTL+  Y R+G +
Sbjct: 265 KSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQL 324

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ-------------------- 439
            + F++  E++   L P VV+Y ++++  C+ G +  A                      
Sbjct: 325 EKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAI 384

Query: 440 ---------------LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
                          L E M + GI P ++TY +++ G C    +S A E  N +    L
Sbjct: 385 IDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRL 444

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            PD  +Y T I+     G+  +A  LQ+ M   G    + TY+ L+ GL   G L E   
Sbjct: 445 IPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEY 504

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
           L +KM+ +  +P +  +  ++ A  + G+  +  DL   ML+K
Sbjct: 505 LYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 547



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/459 (25%), Positives = 227/459 (49%), Gaps = 27/459 (5%)

Query: 116 TQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGI------LDVLIGG---- 165
           T+  V  +   + T+++  I+ G L + + + + +VC   HG+       +VL+ G    
Sbjct: 90  TERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVC---HGLKPNAITYNVLLSGLCRA 146

Query: 166 ---GLSSCV-----SIKIL------DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNC 211
              G +S +     S K++       +L    ++    +  L +F K L+NG+      C
Sbjct: 147 GRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTC 206

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
           + ++  L  +G    A EV + +   G+ P+ V YNT+++ +C+ GE++ A     +M+ 
Sbjct: 207 SILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKS 266

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
           R   P+ +TYN LI G  +   +  A+ L+ +M   G+  +  ++N +I  Y   G L +
Sbjct: 267 RHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEK 326

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
              +  EM   G+ P + +Y  ++   CK G++ +A     +M  K+V+P+   YN ++ 
Sbjct: 327 CFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIID 386

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
            Y   G   +AF+L ++++S  + P++VTYN LI GLC    +  A+++  ++ N  ++P
Sbjct: 387 AYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIP 446

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           D ++Y  +++  C  GN+  A +    M + G++     Y   I+G    G  +E   L 
Sbjct: 447 DAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLY 506

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           ++M+     P    +N++V    K G+  +A +L ++M+
Sbjct: 507 QKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEML 545


>gi|357138611|ref|XP_003570884.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Brachypodium distachyon]
          Length = 864

 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 144/481 (29%), Positives = 243/481 (50%), Gaps = 18/481 (3%)

Query: 211 CNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQ 270
           CN ++      G   +A  +   M   G+ P++VT+N  + + CK G + EA  +  +MQ
Sbjct: 208 CNTVVAGFCREGRVDEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQ 267

Query: 271 G---RGCS-PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEK 326
               +G   P+ VT++V+++GF   G +++A  L+  M   G      SYN  + G  + 
Sbjct: 268 EAWEQGLPRPDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKN 327

Query: 327 GLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI-PDIIS 385
           G + EA  L  EM   GV P   TYNI++ GLCK G+  D R R  + +R  V+ PD+++
Sbjct: 328 GRVGEAQELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVR-RVEDFVRSGVMTPDVVT 386

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           Y +LL+ YC  GN   A  + DE+  +   P + TYN L+  L + G     ++L E M 
Sbjct: 387 YTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMS 446

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
            +G   D  +  I+++G C+   L MA +  + M  +G    R A         +LG++ 
Sbjct: 447 EKGYSLDTASCNIIIDGLCRNSKLEMAMDIVDGMWNEG----RLALR-------RLGNSF 495

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
            +  + +  ++K   PD ITY+ L++ LCK G  +EA + L +M+G    PD + Y + I
Sbjct: 496 VSL-VSDSSISKSCLPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFI 554

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
           H     G       +  +M ++  +P+  +Y +LI     + + +      SEM+ KGI 
Sbjct: 555 HGYCMHGKTSLAIKVLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGIS 614

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
            NV+TYN+LI   C    +++A  L  +M +  I+PN  ++ +LI   C   ++  A R+
Sbjct: 615 SNVMTYNSLIKSFCGRGMVNKAMPLLDEMLQNEIVPNVTSFGLLIKAFCKTADFSAAQRV 674

Query: 686 Y 686
           +
Sbjct: 675 F 675



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 165/579 (28%), Positives = 271/579 (46%), Gaps = 44/579 (7%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM---G 235
           LLL   ++  ++    ++  +L  G  PDV   N +++ L   G    AR V+  M    
Sbjct: 114 LLLAALREDRLDLVEALYKDLLLAGATPDVFTRNALLEALSAAGRMDLARRVFDAMPARN 173

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
           EF       +   +   +C+ G   +AL +L  M       N V  N ++ GF R G ++
Sbjct: 174 EF-------SSGILARGYCRAGRSADALAVLDAMP----EMNLVVCNTVVAGFCREGRVD 222

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA---LNLEEEMVTRGVA-PTLATY 351
           +A  L+  M   GL  +  ++N  I    + G ++EA    N  +E   +G+  P   T+
Sbjct: 223 EAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQEAWEQGLPRPDQVTF 282

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           ++++ G C  G V +A      M     +  + SYN  L G  ++G +GEA  L  E+  
Sbjct: 283 DVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRVGEAQELLSEMAH 342

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL-PDVITYTIMVNGSCKMGNLS 470
             + P   TYN ++DGLC+ G     +++ E+ +  G++ PDV+TYT +++  C  GN +
Sbjct: 343 EGVQPNSYTYNIIVDGLCKEGKAFDVRRV-EDFVRSGVMTPDVVTYTSLLHAYCSKGNTT 401

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            A    +EM +KG  P+ F Y   +   LK G T+E  RL E M  KG+  D  + N+++
Sbjct: 402 AANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGYSLDTASCNIII 461

Query: 531 HGLCKLGSLEEANELLRKM----------VGDGFI-------------PDHITYTSIIHA 567
            GLC+   LE A +++  M          +G+ F+             PD ITY+++++A
Sbjct: 462 DGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSSISKSCLPDRITYSTLMNA 521

Query: 568 SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
             + G     +     M+ K +SP  V Y   IH +   G+  LA     +M+ +   P+
Sbjct: 522 LCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSLAIKVLRDMEKRSCNPS 581

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYK 687
             +YN LI G    ++ D+   L  +M+E+GI  N  TY  LI   C  G   +A+ L  
Sbjct: 582 TRSYNLLIWGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSLIKSFCGRGMVNKAMPLLD 641

Query: 688 EMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
           EML  EI P+  T   LL+K   K     A + +  + L
Sbjct: 642 EMLQNEIVPNV-TSFGLLIKAFCKTADFSAAQRVFDVAL 679



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 163/658 (24%), Positives = 276/658 (41%), Gaps = 96/658 (14%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVN--MHGILDVLIGGGLSSCVSIKIL 176
           G   D F    +LE L  +G +  A  V + +   N    GIL         S  ++ +L
Sbjct: 138 GATPDVFTRNALLEALSAAGRMDLARRVFDAMPARNEFSSGILARGYCRAGRSADALAVL 197

Query: 177 DLL----LLI-------YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSV 225
           D +    L++       + ++  V++   + ++M   GL P+V   N  I  L   G  +
Sbjct: 198 DAMPEMNLVVCNTVVAGFCREGRVDEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVL 257

Query: 226 KAREVYRMMGEF---GI-KPSIVTYNTMLDSFC--------------------------- 254
           +A  ++  M E    G+ +P  VT++ ML  FC                           
Sbjct: 258 EAYRIFNDMQEAWEQGLPRPDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESY 317

Query: 255 --------KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
                   K G + EA ELL EM   G  PN  TYN+++ G  + G+    R  + D ++
Sbjct: 318 NRWLSGLVKNGRVGEAQELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVR-RVEDFVR 376

Query: 307 LG-LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
            G +     +Y  ++  Y  KG    A  + +EM  +G AP L TYN+L+  L K GR +
Sbjct: 377 SGVMTPDVVTYTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTT 436

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI---------------------GEAF- 403
           +       M  K    D  S N ++ G CR+  +                     G +F 
Sbjct: 437 EVERLLERMSEKGYSLDTASCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFV 496

Query: 404 -LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
            L+ D   S++ +P  +TY+TL++ LC+ G  + A++    MI + I PD + Y   ++G
Sbjct: 497 SLVSDSSISKSCLPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHG 556

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            C  G  S+A +   +M ++   P   +Y   I G  +   + E  +L  EM  KG   +
Sbjct: 557 YCMHGKTSLAIKVLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGISSN 616

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
           ++TYN L+   C  G + +A  LL +M+ +  +P+  ++  +I A  +  D    + +F+
Sbjct: 617 VMTYNSLIKSFCGRGMVNKAMPLLDEMLQNEIVPNVTSFGLLIKAFCKTADFSAAQRVFD 676

Query: 583 NMLRKG---------LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
             L            +   L TY   I    A+  LE A     EM+   I      Y  
Sbjct: 677 VALSTCGQKEVLYCLMCTELSTYARWIE---AKNILETAL----EMR---ISIQSFPYKR 726

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           +I GLC +   D A+ L      +G   +  T+  +I+    +G   +A  L ++M++
Sbjct: 727 IIAGLCDVSEADHAHSLLKLFIAKGYSFDPATFMPVIDALSESGKKHDADMLSEKMME 784



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 126/517 (24%), Positives = 219/517 (42%), Gaps = 73/517 (14%)

Query: 113 WVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVS 172
           W +  P  + D+  F  +L    ++G++  A  +V+ + C           GG L     
Sbjct: 270 WEQGLP--RPDQVTFDVMLSGFCDAGMVDEATVLVDIMRC-----------GGFLRK--- 313

Query: 173 IKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR 232
           ++  +  L    K   V +   + ++M   G+ P+    N I+  L   G +   R V  
Sbjct: 314 VESYNRWLSGLVKNGRVGEAQELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVED 373

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
            +    + P +VTY ++L ++C +G    A  +L EM  +GC+PN  TYNVL+    + G
Sbjct: 374 FVRSGVMTPDVVTYTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAG 433

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM------------- 339
              +   L+  M + G  +   S N II G      L  A+++ + M             
Sbjct: 434 RTTEVERLLERMSEKGYSLDTASCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGN 493

Query: 340 ----------VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTL 389
                     +++   P   TY+ L+  LCK GR  +A+ +  EM+ K++ PD + Y+T 
Sbjct: 494 SFVSLVSDSSISKSCLPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTF 553

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
           ++GYC  G    A  +  ++  R+  P+  +YN LI G       +   +L   M  +GI
Sbjct: 554 IHGYCMHGKTSLAIKVLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGI 613

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
             +V+TY  ++   C  G ++ A    +EML+  + P+  ++   I    K  D S A R
Sbjct: 614 SSNVMTYNSLIKSFCGRGMVNKAMPLLDEMLQNEIVPNVTSFGLLIKAFCKTADFSAAQR 673

Query: 510 L---------QEEMLAKGFPPDLITY-------NVL------------------VHGLCK 535
           +         Q+E+L      +L TY       N+L                  + GLC 
Sbjct: 674 VFDVALSTCGQKEVLYCLMCTELSTYARWIEAKNILETALEMRISIQSFPYKRIIAGLCD 733

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           +   + A+ LL+  +  G+  D  T+  +I A  E G
Sbjct: 734 VSEADHAHSLLKLFIAKGYSFDPATFMPVIDALSESG 770


>gi|414878622|tpg|DAA55753.1| TPA: hypothetical protein ZEAMMB73_281441 [Zea mays]
          Length = 573

 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 160/566 (28%), Positives = 276/566 (48%), Gaps = 64/566 (11%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI---------VTYNTM 249
           M+  G+  DV   +  I  L D G   K    Y M+  + +   I         + YN +
Sbjct: 1   MIEMGVKLDVHGFSSFIIGLCDCG---KFDLAYNMVRRYAVLQEISQERVPIEAMAYNMV 57

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           +D  CKE +++EA ++L      G +P+  +Y+ LI    + G LE+A   + DM+  G+
Sbjct: 58  IDGLCKEMKLKEAEKVLEIKTRHGSAPDLYSYSYLIHSHCKMGNLEKAWYHVEDMVSHGI 117

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
           +++ +    ++    + G++ E +   ++    GV      YNI +   CK G +++A  
Sbjct: 118 EINCYIVAYLLQCLRKLGMVSEVIVHFQKFRDLGVHLDGVLYNIAMDAYCKLGNMNEAVK 177

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
              EM+  +++PD I Y  L+ GYC  G    A+ +F+E+   N+ P VVTYN L  G  
Sbjct: 178 LLNEMMAGSLVPDKIHYTCLINGYCLKGETENAWQVFEEMLKANIKPDVVTYNILASGYS 237

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
           R G +     + E+M++QG+ P+ +TY I + G C+ GNLS A   FN +  +G+     
Sbjct: 238 RNGLVMKVFDILEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEERGIDNINV 297

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
            Y + + G L  G T  AY L   +  +G   D ++ + L++GLC+   + EA+ + + M
Sbjct: 298 LYGSMVCGYLHSGWTDHAYMLFLRVAKQGNMVDRLSCSKLINGLCRDEKVGEASTVCKMM 357

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRL 609
           +    +PD I+Y+ +I A  +  D+   R  F++M+ +GLS  +V YTVL++ +   GRL
Sbjct: 358 LEKNVVPDVISYSKLISAYCQTRDMHNARLWFHDMVERGLSDVIV-YTVLMNGYCKVGRL 416

Query: 610 ELAFMYFSEMQVKGIRPNVIT--------------------------------------- 630
           + A   F +M   GI+P+V+                                        
Sbjct: 417 QEACELFVQMINLGIKPDVVAYTVLLDGHLKETLQQGWQGIAKERRTFFLRTKHKVLLNS 476

Query: 631 ------------YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGN 678
                       Y  LI+G C+   +++A GLF +M  +G++P+ +TYT LIN  C+ G 
Sbjct: 477 MKDMEIEPDVTCYTVLIDGRCKAEYLEEARGLFDEMLAKGLIPDVHTYTALINGYCSQGE 536

Query: 679 WQEALRLYKEMLDREIEPDYCTHSAL 704
             +A  L++EM+ + ++PD  + S L
Sbjct: 537 IAKAEDLFQEMIAKGMKPDVLSFSVL 562



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 141/472 (29%), Positives = 230/472 (48%), Gaps = 52/472 (11%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  + K   +E+       M+ +G+  +      +++ LR  G   +    ++   + G
Sbjct: 92  LIHSHCKMGNLEKAWYHVEDMVSHGIEINCYIVAYLLQCLRKLGMVSEVIVHFQKFRDLG 151

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           +    V YN  +D++CK G M EA++LL EM      P+ + Y  LI G+   GE E A 
Sbjct: 152 VHLDGVLYNIAMDAYCKLGNMNEAVKLLNEMMAGSLVPDKIHYTCLINGYCLKGETENAW 211

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            +  +MLK  +K    +YN +  GYS  GL+++  ++ E M+ +G+ P   TY I I G 
Sbjct: 212 QVFEEMLKANIKPDVVTYNILASGYSRNGLVMKVFDILEHMMDQGLEPNSLTYGIAIAGF 271

Query: 359 CKWGRVSDAR--------------------------------HRFFEMLR---KNVIPDI 383
           C+ G +S+A                                 H +   LR   +  + D 
Sbjct: 272 CRGGNLSEAEVLFNIVEERGIDNINVLYGSMVCGYLHSGWTDHAYMLFLRVAKQGNMVDR 331

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
           +S + L+ G CR   +GEA  +   +  +N+VP V++Y+ LI   C+  D+  A+    +
Sbjct: 332 LSCSKLINGLCRDEKVGEASTVCKMMLEKNVVPDVISYSKLISAYCQTRDMHNARLWFHD 391

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK--- 500
           M+ +G L DVI YT+++NG CK+G L  A E F +M+  G++PD  AYT  + G LK   
Sbjct: 392 MVERG-LSDVIVYTVLMNGYCKVGRLQEACELFVQMINLGIKPDVVAYTVLLDGHLKETL 450

Query: 501 ----LGDTSEA----YRLQEEMLAKGFP-----PDLITYNVLVHGLCKLGSLEEANELLR 547
                G   E      R + ++L          PD+  Y VL+ G CK   LEEA  L  
Sbjct: 451 QQGWQGIAKERRTFFLRTKHKVLLNSMKDMEIEPDVTCYTVLIDGRCKAEYLEEARGLFD 510

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           +M+  G IPD  TYT++I+     G++ +  DLF  M+ KG+ P +++++VL
Sbjct: 511 EMLAKGLIPDVHTYTALINGYCSQGEIAKAEDLFQEMIAKGMKPDVLSFSVL 562



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 143/470 (30%), Positives = 230/470 (48%), Gaps = 28/470 (5%)

Query: 113 WVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVS 172
           W   +  V     + C I+  L++   LR    V E +V       L V + G L     
Sbjct: 106 WYHVEDMVSHGIEINCYIVAYLLQC--LRKLGMVSEVIVHFQKFRDLGVHLDGVL----- 158

Query: 173 IKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR 232
               ++ +  Y K   + + + + N+M+   L+PD  +   +I      G +  A +V+ 
Sbjct: 159 ---YNIAMDAYCKLGNMNEAVKLLNEMMAGSLVPDKIHYTCLINGYCLKGETENAWQVFE 215

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
            M +  IKP +VTYN +   + + G + +  ++L  M  +G  PN +TY + I GF R G
Sbjct: 216 EMLKANIKPDVVTYNILASGYSRNGLVMKVFDILEHMMDQGLEPNSLTYGIAIAGFCRGG 275

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
            L +A  L   + + G+      Y  ++CGY   G    A  L   +  +G      + +
Sbjct: 276 NLSEAEVLFNIVEERGIDNINVLYGSMVCGYLHSGWTDHAYMLFLRVAKQGNMVDRLSCS 335

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
            LI GLC+  +V +A      ML KNV+PD+ISY+ L+  YC++ ++  A L F ++  R
Sbjct: 336 KLINGLCRDEKVGEASTVCKMMLEKNVVPDVISYSKLISAYCQTRDMHNARLWFHDMVER 395

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK----MGN 468
            L   V+ Y  L++G C+ G L+ A +L   MIN GI PDV+ YT++++G  K     G 
Sbjct: 396 GL-SDVIVYTVLMNGYCKVGRLQEACELFVQMINLGIKPDVVAYTVLLDGHLKETLQQGW 454

Query: 469 LSMARE---FF---------NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA 516
             +A+E   FF         N M    ++PD   YT  I G  K     EA  L +EMLA
Sbjct: 455 QGIAKERRTFFLRTKHKVLLNSMKDMEIEPDVTCYTVLIDGRCKAEYLEEARGLFDEMLA 514

Query: 517 KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
           KG  PD+ TY  L++G C  G + +A +L ++M+  G  PD +++ S++H
Sbjct: 515 KGLIPDVHTYTALINGYCSQGEIAKAEDLFQEMIAKGMKPDVLSF-SVLH 563



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 143/303 (47%), Gaps = 6/303 (1%)

Query: 421 YNTLIDGLCRYGDLEVAQQLKENM-----INQGILP-DVITYTIMVNGSCKMGNLSMARE 474
           +++ I GLC  G  ++A  +         I+Q  +P + + Y ++++G CK   L  A +
Sbjct: 13  FSSFIIGLCDCGKFDLAYNMVRRYAVLQEISQERVPIEAMAYNMVIDGLCKEMKLKEAEK 72

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
                 R G  PD ++Y+  I    K+G+  +A+   E+M++ G   +      L+  L 
Sbjct: 73  VLEIKTRHGSAPDLYSYSYLIHSHCKMGNLEKAWYHVEDMVSHGIEINCYIVAYLLQCLR 132

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           KLG + E     +K    G   D + Y   + A  ++G++     L N M+   L P  +
Sbjct: 133 KLGMVSEVIVHFQKFRDLGVHLDGVLYNIAMDAYCKLGNMNEAVKLLNEMMAGSLVPDKI 192

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
            YT LI+ +  +G  E A+  F EM    I+P+V+TYN L +G  R   + + + +   M
Sbjct: 193 HYTCLINGYCLKGETENAWQVFEEMLKANIKPDVVTYNILASGYSRNGLVMKVFDILEHM 252

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYK 714
            ++G+ PN  TY I I   C  GN  EA  L+  + +R I+     + +++   L   + 
Sbjct: 253 MDQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEERGIDNINVLYGSMVCGYLHSGWT 312

Query: 715 VHA 717
            HA
Sbjct: 313 DHA 315


>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
          Length = 584

 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 138/500 (27%), Positives = 240/500 (48%), Gaps = 5/500 (1%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P V+  N ++  L           VY  M + G+ P++ TYN ++ + C+   +  A ++
Sbjct: 67  PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKM 126

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           L EM  +GC P+ V++  +++G  + G +E+ARG + + + +       SYN ++     
Sbjct: 127 LDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPV-----QASYNAVVHALCG 181

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
           +  + E  ++  EMV RG+ P + TY  ++   CK   +  A      M+     P++++
Sbjct: 182 EFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLT 241

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           +  L+ G+   G + +A  ++  +      P+ ++YN LI GLC  GDL+ A     +M 
Sbjct: 242 FTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMK 301

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
              +LP+  TY+ +V+G    G+L  A   +NEM   G +P+   YT  I    K     
Sbjct: 302 RNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFD 361

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           +A  L ++ML    PP+ +T+N L+  LC  G +  A  +   M  +G  P+  TY  ++
Sbjct: 362 QAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELL 421

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
           H     G+ +    +   ML  G   +LVTY  +I+        + A +    M V+GI+
Sbjct: 422 HGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQ 481

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           P+  T+NA+I+  C+  ++  A  L   M       N   YTILI+E CN G    A+  
Sbjct: 482 PDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVY 541

Query: 686 YKEMLDREIEPDYCTHSALL 705
             +ML   I P+  T + L+
Sbjct: 542 LLKMLYEGICPNEATWNVLV 561



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 142/497 (28%), Positives = 244/497 (49%), Gaps = 30/497 (6%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
            +++ + LL    +++MV   + V++ M + G+ P+V   N +I+ L  N     AR++ 
Sbjct: 68  GVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKML 127

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELL-----------------------WE 268
             M   G  P  V++ T++   CK G ++EA   L                       WE
Sbjct: 128 DEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRMWE 187

Query: 269 -------MQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC 321
                  M  RG  PN VTY  ++  F +  EL  A  ++  M+ +G   +  ++  ++ 
Sbjct: 188 VFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVK 247

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           G+ E G + +AL++   MV  G AP+  +YN+LI GLC  G +  A   F  M R  ++P
Sbjct: 248 GFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLP 307

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           +  +Y+TL+ G+  +G++  A L+++E++S    P VV Y  +ID LC+    + A+ L 
Sbjct: 308 NATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLI 367

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
           + M+     P+ +T+  ++   C  G +  A   F+ M R G  P+   Y   + G  + 
Sbjct: 368 DKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFRE 427

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
           G+  +A+ +  EML  GF   L+TYN +++ LC++   + A  LL +M+  G  PD  T+
Sbjct: 428 GNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTF 487

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
            +IIHA  + G +     L   M        +V YT+LI     +G+L  A +Y  +M  
Sbjct: 488 NAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLY 547

Query: 622 KGIRPNVITYNALINGL 638
           +GI PN  T+N L+  +
Sbjct: 548 EGICPNEATWNVLVRAI 564



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 129/469 (27%), Positives = 231/469 (49%), Gaps = 6/469 (1%)

Query: 222 GFSVKAREVYRMMGEFGIK-PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVT 280
           G + +A + +    + G + P +  YN +LD+  +E  +   + +   M+  G  PN  T
Sbjct: 47  GSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYT 106

Query: 281 YNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV 340
           YN+LI    +N  ++ AR ++ +M + G      S+  I+ G  + G + EA     E V
Sbjct: 107 YNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETV 166

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
                P  A+YN +++ LC   R+ +      EM+++ + P++++Y T++  +C++  + 
Sbjct: 167 -----PVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELR 221

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
            A  +   + S    P V+T+  L+ G    G +  A  +   M+++G  P  I+Y +++
Sbjct: 222 MACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLI 281

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
            G C +G+L  A +FFN M R  L P+   Y+T + G    GD   A  +  EM + G  
Sbjct: 282 RGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCK 341

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           P+++ Y  ++  LCK    ++A  L+ KM+ D   P+ +T+ ++I    + G + R  ++
Sbjct: 342 PNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNV 401

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
           F+ M R G  P   TY  L+H     G  + AF    EM   G   +++TYN +IN LC+
Sbjct: 402 FHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQ 461

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           +     A  L   M  +GI P+ +T+  +I+  C  G    A  L  +M
Sbjct: 462 MCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQM 510



 Score = 47.0 bits (110), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 46/107 (42%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           +  M +  +L+  +M+  G+ PD    N II      G    A  +   M       ++V
Sbjct: 461 QMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVV 520

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
            Y  ++   C +G++  A+  L +M   G  PN  T+NVL+     N
Sbjct: 521 AYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTN 567


>gi|32489921|emb|CAE05513.1| OSJNBa0038P21.6 [Oryza sativa Japonica Group]
          Length = 648

 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 138/498 (27%), Positives = 257/498 (51%), Gaps = 27/498 (5%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A  V+  +   G+ P + +YNT++D F KEGE+ +A EL ++M  +  SP+ VTYN LI 
Sbjct: 48  ALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLID 107

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G  +  E+ ++  ++  M+  G++ +  +YN +I GYS  G+  E++ + +EM + G+ P
Sbjct: 108 GLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIP 167

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
            +   N  I+ LC+  R+ +A+  F  M+ K   P+IISY+TLL+GY   G       L 
Sbjct: 168 CVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLV 227

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
           + + S+ +VP    +N LI+   R G ++ A  + E+M N+G++PD +T+  +++  C++
Sbjct: 228 NLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRI 287

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G L  A   FN M+  G+ P    Y   I G    G+  +A  L  EM+ K  PP  + Y
Sbjct: 288 GRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKY 347

Query: 527 -NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL----------- 574
            + +++ L K G + E  +++  MV  G  P+ +T+ S++     +G++           
Sbjct: 348 FSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEALHYLMLWH 407

Query: 575 ------------RR---GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
                       RR    + +F+ M+  G + ++ TY V++         + A M   ++
Sbjct: 408 QLALNRIVTYMARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKL 467

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
               ++ ++IT+N +I+ + ++ R  +A  LF  +   G++P  +TY ++I+      ++
Sbjct: 468 FAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESY 527

Query: 680 QEALRLYKEMLDREIEPD 697
           +EA  L+  +      PD
Sbjct: 528 EEADNLFISVEKSGRAPD 545



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 141/542 (26%), Positives = 248/542 (45%), Gaps = 62/542 (11%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           E  L VF ++LR GL PDV + N +I      G   KA E++  M E  + P +VTYN++
Sbjct: 46  ELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSL 105

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS-------------------- 289
           +D  CK  EM ++  +L +M   G  PN  TYN LI G+S                    
Sbjct: 106 IDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGL 165

Query: 290 ---------------RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
                          R+  +++A+ +   M+  G K +  SY+ ++ GY+ +G      +
Sbjct: 166 IPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNS 225

Query: 335 LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
           L   MV++G+ P    +NILI    + G +  A   F +M  K +IPD +++ T++   C
Sbjct: 226 LVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLC 285

Query: 395 RSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVI 454
           R G + +A   F+ +    + P+   Y  LI G C +G+L  A++L   M+N+ I P  +
Sbjct: 286 RIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 345

Query: 455 TY-TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD---------- 503
            Y + ++N   K G ++  ++  + M++ G +P+   + + + G   +G+          
Sbjct: 346 KYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEALHYLML 405

Query: 504 ----------------TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
                           T+ A ++  EM+  G    + TY V++ GLC+    +EAN LL 
Sbjct: 406 WHQLALNRIVTYMARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLE 465

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
           K+       D IT+  +I A L++G  +  ++LF  +   GL PT+ TY ++I       
Sbjct: 466 KLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEE 525

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
             E A   F  ++  G  P+    N ++  L +   + +A      ++E  +     T +
Sbjct: 526 SYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAKASNYLSIIDENNLTLEASTIS 585

Query: 668 IL 669
           +L
Sbjct: 586 LL 587



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 131/489 (26%), Positives = 231/489 (47%), Gaps = 12/489 (2%)

Query: 239 IKPSIVTYNTMLDSFCKEGEMQE-ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           + PS  T  +++D    E    E AL +   +   G  P+  +YN LI GFS+ GE+++A
Sbjct: 25  LPPSTPT-TSLIDVLPAECTGPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKA 83

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L   M++  +     +YN +I G  +   +V++  + E+MV  G+ P   TYN LIYG
Sbjct: 84  YELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYG 143

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
               G   ++   F EM    +IP +++ N+ ++  CR   I EA  +FD +  +   P 
Sbjct: 144 YSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPN 203

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           +++Y+TL+ G    G       L   M+++GI+P+   + I++N   + G +  A   F 
Sbjct: 204 IISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFE 263

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           +M  KG+ PD   + T I+   ++G   +A      M+  G PP    Y  L+ G C  G
Sbjct: 264 DMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHG 323

Query: 538 SLEEANELLRKMVGDGFIPDHITY-TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
            L +A EL+ +M+     P  + Y +SII+   + G +  G+D+ + M++ G  P +VT+
Sbjct: 324 ELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTF 383

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
             L+  +   G +E A  Y        +   ++TY A        RR   A  +F +M E
Sbjct: 384 NSLMEGYCLVGNMEEALHYLMLWHQLALN-RIVTYMA--------RRTTAAKKMFHEMIE 434

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVH 716
            G   +  TY +++   C      EA  L +++    ++ D  T + ++   L    +  
Sbjct: 435 SGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQE 494

Query: 717 AVEYLESLT 725
           A E   +++
Sbjct: 495 AKELFAAIS 503



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 141/554 (25%), Positives = 250/554 (45%), Gaps = 45/554 (8%)

Query: 70  PW-AFCNNRWVSDH-----FQAVVSDPEL-LVRVLNRIREKPRIALRFF-RWVETQPGVK 121
           PW + C+N W   H          S P   L+ VL      P +AL  F R + T  G+ 
Sbjct: 4   PWPSSCSNGWTDGHAPMRLLMLPPSTPTTSLIDVLPAECTGPELALAVFGRLLRT--GLG 61

Query: 122 RDEFVFCTILEILIESGLLRSAY-----------------------WVVETVVCVNMHGI 158
            D   + T+++   + G +  AY                        + +T   V    +
Sbjct: 62  PDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERV 121

Query: 159 LDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL 218
           L+ ++  G+    + K  + L+  Y+   M ++ + VF +M  +GL+P V NCN  I  L
Sbjct: 122 LEQMVDAGIRP--NNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHAL 179

Query: 219 RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNG 278
             +    +A++++  M   G KP+I++Y+T+L  +  EG       L+  M  +G  PN 
Sbjct: 180 CRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNH 239

Query: 279 VTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
             +N+LI  ++R G +++A  +  DM   G+     ++  +I      G L +AL+    
Sbjct: 240 RFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNH 299

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISY-NTLLYGYCRSG 397
           MV  GV P+ A Y  LI G C  G +  A+    EM+ K++ P  + Y ++++    + G
Sbjct: 300 MVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEG 359

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
            + E   + D +      P VVT+N+L++G C  G++E A      + +Q  L  ++TY 
Sbjct: 360 RVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEALHYLM-LWHQLALNRIVTYM 418

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
                       + A++ F+EM+  G       Y   + G  +   T EA  L E++ A 
Sbjct: 419 AR--------RTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAM 470

Query: 518 GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
               D+IT+N+++  + K+G  +EA EL   +   G +P   TY  +I   ++       
Sbjct: 471 NVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEA 530

Query: 578 RDLFNNMLRKGLSP 591
            +LF ++ + G +P
Sbjct: 531 DNLFISVEKSGRAP 544



 Score = 45.4 bits (106), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 27/129 (20%), Positives = 63/129 (48%)

Query: 169 SCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR 228
           + VSI+   ++L    + +  ++  ++  K+    +  D+   N +I  +   G   +A+
Sbjct: 437 TTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAK 496

Query: 229 EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
           E++  +  +G+ P++ TYN M+ +  KE   +EA  L   ++  G +P+    N ++   
Sbjct: 497 ELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRML 556

Query: 289 SRNGELEQA 297
            +  E+ +A
Sbjct: 557 LKKAEVAKA 565


>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Glycine max]
          Length = 682

 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 154/476 (32%), Positives = 238/476 (50%), Gaps = 9/476 (1%)

Query: 226 KAREVYRMMGE-FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVL 284
           +A  V++ M   FG  P+I ++NT+L++F +  +   A       +    SPN  TYNVL
Sbjct: 95  EALHVFQTMPHVFGCSPTIRSFNTLLNAFVESHQWARAENFFKYFEAARVSPNVETYNVL 154

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           +    + GE E+ RGL+  M   G+     +Y  +I G ++ G L  AL + +EM  RGV
Sbjct: 155 MKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRERGV 214

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKN-VIPDIISYNTLLYGYCRSGNIGEAF 403
            P +  YN++I G  K G    A   +  +LR+  V P ++SYN ++ G C+ G   E  
Sbjct: 215 EPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVMISGLCKCGRFSEGL 274

Query: 404 LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
            +++ ++       + TY+ LI GL   GDL  A+++ E M+ +G+ PDV+T   M+NG 
Sbjct: 275 EIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGL 334

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
           CK GN+    E + EM +  L+  R +Y   + G  + G   +A  L + +L      D 
Sbjct: 335 CKAGNVEECFELWEEMGKCSLRNVR-SYNIFLKGLFENGKVDDAMMLWDGLLE----ADS 389

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVG--DGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
            TY V+VHGLC  G +  A ++L +      G   D   Y+S+I+A  + G L     + 
Sbjct: 390 ATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSSLINALCKEGRLDEADGVV 449

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
             M ++G         VLI       +L+ A   F EM  KG    V++YN LINGL R 
Sbjct: 450 ELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRA 509

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
            R  +AY    +M E+G  P+  TY+ LI     +     ALRL+ + LD   +PD
Sbjct: 510 ERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQFLDTGHKPD 565



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 173/652 (26%), Positives = 308/652 (47%), Gaps = 55/652 (8%)

Query: 90  PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILE-ILIESGLLRS-AYWVV 147
           P  L+++L +  + P  AL  F     +PG      VF  IL  +  + GLL + A  ++
Sbjct: 10  PHRLLKLL-KAEKSPLSALNVFDAAVRRPGFSPSSAVFHHILRRVAADPGLLLAHAPRII 68

Query: 148 ETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRN-GLLP 206
             + C                 C     L LL   Y K  M  + L VF  M    G  P
Sbjct: 69  AAIHC----------------PCPEDVPLTLLK-AYAKTRMPNEALHVFQTMPHVFGCSP 111

Query: 207 DVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELL 266
            +++ N ++    ++    +A   ++      + P++ TYN ++   CK+GE ++   LL
Sbjct: 112 TIRSFNTLLNAFVESHQWARAENFFKYFEAARVSPNVETYNVLMKVMCKKGEFEKGRGLL 171

Query: 267 WEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEK 326
             M G G SP+ +TY  LI G +++G+L  A  +  +M + G++     YN II G+ ++
Sbjct: 172 TWMWGAGMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDGFFKR 231

Query: 327 GLLVEALNLEEEMVTRG-VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
           G  V+A  + E ++    V P++ +YN++I GLCK GR S+    +  M +     D+ +
Sbjct: 232 GDFVKAGEMWERLLREELVFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFT 291

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN-- 443
           Y+ L++G   +G++G A  +++E+  R + P VVT N +++GLC+ G++E   +L E   
Sbjct: 292 YSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMG 351

Query: 444 ---------------------------MINQGIL-PDVITYTIMVNGSCKMGNLSMAREF 475
                                      M+  G+L  D  TY ++V+G C  G ++ A + 
Sbjct: 352 KCSLRNVRSYNIFLKGLFENGKVDDAMMLWDGLLEADSATYGVVVHGLCWNGYVNRALQV 411

Query: 476 FNEMLRK--GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
             E   +  G+  D FAY++ I    K G   EA  + E M  +G   +    NVL+ G 
Sbjct: 412 LEEAEHREGGMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGF 471

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
            K   L+ A ++ R+M G G     ++Y  +I+  L     R   D  N ML KG  P +
Sbjct: 472 VKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDI 531

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
           +TY+ LI        ++ A   + +    G +P++I YN +I+ LC   +++ A  L+  
Sbjct: 532 ITYSTLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYST 591

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           + ++  + N  T+  ++      GN + A +++  +L+ E++PD  +++  L
Sbjct: 592 LRQKKCV-NLVTHNTIMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITL 642



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 152/534 (28%), Positives = 247/534 (46%), Gaps = 38/534 (7%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           +++  ++L+ +  KK   E+   +   M   G+ PD      +I  +  +G    A EV+
Sbjct: 147 NVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGFALEVF 206

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWE--MQGRGCSPNGVTYNVLITGFS 289
             M E G++P +V YN ++D F K G+  +A E+ WE  ++     P+ V+YNV+I+G  
Sbjct: 207 DEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEM-WERLLREELVFPSVVSYNVMISGLC 265

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           + G   +   +   M K   K    +Y+ +I G SE G L  A  + EEMV RGV P + 
Sbjct: 266 KCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVV 325

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFD-- 407
           T N ++ GLCK G V +     +E + K  + ++ SYN  L G   +G + +A +L+D  
Sbjct: 326 TCNAMLNGLCKAGNVEEC-FELWEEMGKCSLRNVRSYNIFLKGLFENGKVDDAMMLWDGL 384

Query: 408 -------------------------------ELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
                                          E R   +      Y++LI+ LC+ G L+ 
Sbjct: 385 LEADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSSLINALCKEGRLDE 444

Query: 437 AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
           A  + E M  +G   +     ++++G  K   L  A + F EM  KG      +Y   I 
Sbjct: 445 ADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILIN 504

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
           G L+     EAY    EML KG+ PD+ITY+ L+ GL +   ++ A  L  + +  G  P
Sbjct: 505 GLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQFLDTGHKP 564

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
           D I Y  +IH     G +     L++  LR+     LVT+  ++      G  E+A   +
Sbjct: 565 DIIMYNIVIHRLCSSGKVEDALQLYST-LRQKKCVNLVTHNTIMEGFYKVGNCEMASKIW 623

Query: 617 SEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
           + +    ++P++I+YN  + GLC   R+  A G   D    G LP   T+ IL+
Sbjct: 624 AHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALVRGFLPTAITWNILV 677



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 134/485 (27%), Positives = 228/485 (47%), Gaps = 46/485 (9%)

Query: 193 LLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMGEFGIKPSIVTYNTMLD 251
           L VF++M   G+ PDV   N II      G  VKA E++ R++ E  + PS+V+YN M+ 
Sbjct: 203 LEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVMIS 262

Query: 252 SFCKEGEMQEALELLWE------------------------------------MQGRGCS 275
             CK G   E LE+ WE                                    M GRG  
Sbjct: 263 GLCKCGRFSEGLEI-WERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVR 321

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           P+ VT N ++ G  + G +E+   L  +M K  L+ +  SYN  + G  E G + +A+ L
Sbjct: 322 PDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLR-NVRSYNIFLKGLFENGKVDDAMML 380

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI--ISYNTLLYGY 393
            + ++        ATY ++++GLC  G V+ A     E   +    D+   +Y++L+   
Sbjct: 381 WDGLLE----ADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSSLINAL 436

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
           C+ G + EA  + + +  R         N LIDG  ++  L+ A ++   M  +G    V
Sbjct: 437 CKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTV 496

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
           ++Y I++NG  +      A +  NEML KG +PD   Y+T I G  +      A RL  +
Sbjct: 497 VSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQ 556

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
            L  G  PD+I YN+++H LC  G +E+A +L   +     + + +T+ +I+    ++G+
Sbjct: 557 FLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKCV-NLVTHNTIMEGFYKVGN 615

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
                 ++ ++L   L P +++Y + +    + GR+  A  +  +  V+G  P  IT+N 
Sbjct: 616 CEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALVRGFLPTAITWNI 675

Query: 634 LINGL 638
           L+  +
Sbjct: 676 LVRAV 680


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 252/512 (49%), Gaps = 5/512 (0%)

Query: 186 KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF---GIKPS 242
           +  +   L V ++M R G  P     + I++     G     R   R++ +    G    
Sbjct: 128 RGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALD 187

Query: 243 IVTYNTMLDSFCKEG-EMQEALELLWEMQGR-GCSPNGVTYNVLITGFSRNGELEQARGL 300
           +   N +L++ C +G  + EAL LL ++    GC P+ V+YN ++ G        + + L
Sbjct: 188 VGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDL 247

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           + +M+++G   +  ++N +I      GL      +  +MV  G  P +  Y  ++ G+CK
Sbjct: 248 MEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCK 307

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G +  A      M    + P+++ YNT+L G C +    +A  L  E+   +     VT
Sbjct: 308 EGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVT 367

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           +N L+D  C+ G +    +L E M+  G +PDVITYT ++NG CK G +  A      M 
Sbjct: 368 FNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMA 427

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
             G +P+  +YT  + G        +A  L  +M+ +G  P+ +T+N +++ LCK G +E
Sbjct: 428 ACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVE 487

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           +A ELL++M+ +G  PD I+Y+++I    + G      +L N M+ KG+SP  + Y+ + 
Sbjct: 488 QAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIA 547

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
            A +  GR+      F  +Q   IR + + YNA+I+ LC+    D+A      M   G +
Sbjct: 548 SALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCM 607

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
           PN+ TYTILI    + G  +EA  +  E+  +
Sbjct: 608 PNESTYTILIRGLASEGFVKEAQEMLTELCSK 639



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 142/470 (30%), Positives = 228/470 (48%), Gaps = 6/470 (1%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE----FGIKPSIVTYNTML 250
           V   +   G   DV NCN ++  + D G SV   E  R++ +    FG  P +V+YN +L
Sbjct: 175 VLQDLHGRGCALDVGNCNLVLNAVCDQGGSVD--EALRLLRDLPTSFGCDPDVVSYNAVL 232

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
              C         +L+ EM   GC PN VT+N LI    RNG  E+   ++  M+  G  
Sbjct: 233 KGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCT 292

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
                Y  ++ G  ++G L  A  + + M + G+ P +  YN ++ GLC   R   A   
Sbjct: 293 PDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEEL 352

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
             EM   +   D +++N L+  +C++G +     L +++     VP V+TY T+I+G C+
Sbjct: 353 LAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCK 412

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
            G ++ A  L ++M   G  P+ I+YTI++ G C       A +  ++M+ +G  P+   
Sbjct: 413 EGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVT 472

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           + T I    K G   +A  L ++ML  G  PDLI+Y+ ++ GL K G  +EA ELL  MV
Sbjct: 473 FNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMV 532

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
             G  P+ I Y+SI  A  + G + R   +F+N+    +    V Y  +I +   RG  +
Sbjct: 533 NKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTD 592

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
            A  + + M   G  PN  TY  LI GL     + +A  +  ++  +G L
Sbjct: 593 RAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 642



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 138/478 (28%), Positives = 226/478 (47%), Gaps = 44/478 (9%)

Query: 281 YNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV 340
           YN +++G+ R G+L  AR   R    + +  +A++Y P++     +G + +AL++ +EM 
Sbjct: 86  YNAMVSGYCRAGQLASAR---RLAASVPVPPNAYTYFPVVRALCARGRIADALSVLDEMR 142

Query: 341 TRGVAPTLATYNILIYGLCK-----------------WGR---------------VSDAR 368
            RG AP    Y++++   C                   GR               V D  
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202

Query: 369 HRFFEMLRK--------NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
               E LR            PD++SYN +L G C +   G    L +E+      P VVT
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           +NTLI  LCR G  E   Q+   M++ G  PD+  Y  +++G CK G+L +A E  + M 
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMP 322

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
             GL+P+   Y T + G        +A  L  EM     P D +T+N+LV   C+ G + 
Sbjct: 323 SYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVY 382

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
              ELL +M+  G +PD ITYT++I+   + G +     L  +M   G  P  ++YT+++
Sbjct: 383 RVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVL 442

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
               +  R   A    S+M  +G  PN +T+N +IN LC+   ++QA  L   M   G  
Sbjct: 443 KGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCS 502

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAV 718
           P+  +Y+ +I+    AG   EAL L   M+++ + P+   +S+ +   L K+ +++ V
Sbjct: 503 PDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSS-IASALSKEGRINRV 559



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/452 (26%), Positives = 220/452 (48%), Gaps = 14/452 (3%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           ALR  R + T  G   D   +  +L+     GL  +  W         +  +++ ++  G
Sbjct: 208 ALRLLRDLPTSFGCDPDVVSYNAVLK-----GLCMAKRWG-------RVQDLMEEMVRVG 255

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
                ++   + L+    +  + E+   V  +M+ +G  PD++    ++  +   G    
Sbjct: 256 CPP--NVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEV 313

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A E+   M  +G+KP++V YNT+L   C     ++A ELL EM    C  + VT+N+L+ 
Sbjct: 314 AHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVD 373

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
            F +NG + +   L+  ML+ G      +Y  +I G+ ++GL+ EA+ L + M   G  P
Sbjct: 374 FFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRP 433

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
              +Y I++ GLC   R  DA     +M+ +   P+ +++NT++   C+ G + +A  L 
Sbjct: 434 NTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELL 493

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
            ++      P +++Y+T+IDGL + G  + A +L   M+N+G+ P+ I Y+ + +   K 
Sbjct: 494 KQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKE 553

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G ++   + F+ +    ++ D   Y   I+   K G T  A      M++ G  P+  TY
Sbjct: 554 GRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTY 613

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
            +L+ GL   G ++EA E+L ++   G +  H
Sbjct: 614 TILIRGLASEGFVKEAQEMLTELCSKGALRKH 645



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 183/416 (43%), Gaps = 8/416 (1%)

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           YN ++ GY   G L  A  L   +    V P   TY  ++  LC  GR++DA     EM 
Sbjct: 86  YNAMVSGYCRAGQLASARRLAASV---PVPPNAYTYFPVVRALCARGRIADALSVLDEMR 142

Query: 376 RKNVIPDIISYNTLLYGYCR---SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
           R+   P    Y+ +L   C     G    A  +  +L  R     V   N +++ +C  G
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202

Query: 433 DL--EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
               E  + L++   + G  PDV++Y  ++ G C        ++   EM+R G  P+   
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           + T I    + G     +++  +M+  G  PD+  Y  ++ G+CK G LE A+E+L +M 
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMP 322

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
             G  P+ + Y +++          +  +L   M         VT+ +L+      G + 
Sbjct: 323 SYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVY 382

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
                  +M   G  P+VITY  +ING C+   ID+A  L   M   G  PN  +YTI++
Sbjct: 383 RVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVL 442

Query: 671 NENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
              C+A  W +A  L  +M+++   P+  T + ++     K     A+E L+ + L
Sbjct: 443 KGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLL 498


>gi|110289270|gb|ABG66143.1| expressed protein [Oryza sativa Japonica Group]
 gi|125575153|gb|EAZ16437.1| hypothetical protein OsJ_31906 [Oryza sativa Japonica Group]
          Length = 829

 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 164/553 (29%), Positives = 278/553 (50%), Gaps = 7/553 (1%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           + D L   Y +  MV   L V +KM    +   V   + ++  LR    +  A E++  M
Sbjct: 171 VWDALANSYARAQMVHDALYVLSKMSSLNMQISVFTYDSLLHGLR---MTDVALELFEEM 227

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG-CSPNGVTYNVLITGFSRNGE 293
              G+ PS  +++ +++  CK+ ++ EAL  L E +  G   P G+T+N+L++     G 
Sbjct: 228 ESCGVSPSEYSHSIIINGLCKQDKVGEALSFLQEARKEGKFKPLGMTFNILMSALCNWGF 287

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           ++ A+  +  MLK GL    ++++ +I G  + G + EAL+L E +   G+   + TYN 
Sbjct: 288 VQSAKSFLCLMLKYGLVPDRYTFSTLIHGLCKVGSMEEALDLFERVTKEGMELEIVTYNS 347

Query: 354 LIYGLCKWGRVSDARHRFFEMLR-KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
           LI G    G   +   +  +M+R + V PD+++Y  L+ G+C SG++ E   +  ++  +
Sbjct: 348 LINGYRLLGLTKEI-PKIIQMMRGQGVEPDLVTYTILIAGHCESGDVEEGMKVRKDVLDQ 406

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
            L   +VTY+ L++ L + G       L   + N G+  DVI Y+I+++G CK+G +  A
Sbjct: 407 GLQLNIVTYSVLLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKA 466

Query: 473 REFFNEMLR-KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
            +  N M   + + P    + + + G  K G   EA    E +  K  P D++ YNV++ 
Sbjct: 467 LQVCNAMCSSQRVMPTSLNHFSILLGLCKKGLLVEARWYLENVARKYQPTDVVFYNVVID 526

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           G  KLG +  A  L  ++   G  P  +T  S+++   ++GDL+     F  +   GL P
Sbjct: 527 GYAKLGDIVNAVRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYFRAIQLSGLLP 586

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
           T VTYT L+ A +  G +      F EM  K I+ N +TY+ ++ GLC+  R D+A  + 
Sbjct: 587 TAVTYTTLMDALSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCKQLRFDEAINVL 646

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDK 711
            DM+ +GI  +  TY  LI   C + N Q A  ++  ML R + P   T++ L+     K
Sbjct: 647 KDMDSKGINADPITYNTLIQGFCESENVQMAFHIHDIMLCRGLVPTPVTYNLLINVLCLK 706

Query: 712 DYKVHAVEYLESL 724
              + A   LESL
Sbjct: 707 GKVIQAEILLESL 719



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 140/515 (27%), Positives = 253/515 (49%), Gaps = 44/515 (8%)

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           + G      ++LW  + R C  NG  ++ L   ++R   +  A  ++  M  L +++S  
Sbjct: 147 RSGSAAALCDILWN-RFRECDSNGCVWDALANSYARAQMVHDALYVLSKMSSLNMQISVF 205

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK-------------- 360
           +Y+ ++ G     +   AL L EEM + GV+P+  +++I+I GLCK              
Sbjct: 206 TYDSLLHGLRMTDV---ALELFEEMESCGVSPSEYSHSIIINGLCKQDKVGEALSFLQEA 262

Query: 361 ----------------------WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
                                 WG V  A+     ML+  ++PD  +++TL++G C+ G+
Sbjct: 263 RKEGKFKPLGMTFNILMSALCNWGFVQSAKSFLCLMLKYGLVPDRYTFSTLIHGLCKVGS 322

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           + EA  LF+ +    +   +VTYN+LI+G    G  +   ++ + M  QG+ PD++TYTI
Sbjct: 323 MEEALDLFERVTKEGMELEIVTYNSLINGYRLLGLTKEIPKIIQMMRGQGVEPDLVTYTI 382

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           ++ G C+ G++    +   ++L +GLQ +   Y+  +    K G   E   L  E+   G
Sbjct: 383 LIAGHCESGDVEEGMKVRKDVLDQGLQLNIVTYSVLLNALFKKGMFCEIDNLLGEIYNIG 442

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG-FIPDHITYTSIIHASLEMGDLRRG 577
              D+I Y++L+HG CKLG +E+A ++   M      +P  + + SI+    + G L   
Sbjct: 443 LDMDVIAYSILIHGYCKLGEIEKALQVCNAMCSSQRVMPTSLNHFSILLGLCKKGLLVEA 502

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
           R    N+ RK     +V Y V+I  +A  G +  A   + ++ V G+ P ++T N+L+ G
Sbjct: 503 RWYLENVARKYQPTDVVFYNVVIDGYAKLGDIVNAVRLYDQITVAGMHPTIVTCNSLLYG 562

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
            C++  +  A   F  ++  G+LP   TYT L++    AG     L L+ EM+ + I+ +
Sbjct: 563 YCKIGDLQLAESYFRAIQLSGLLPTAVTYTTLMDALSEAGEVNTMLSLFDEMVAKRIKAN 622

Query: 698 YCTHSAL---LLKQLDKDYKVHAVEYLESLTLGAE 729
             T+S +   L KQL  D  ++ ++ ++S  + A+
Sbjct: 623 AVTYSVIVKGLCKQLRFDEAINVLKDMDSKGINAD 657



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 134/507 (26%), Positives = 250/507 (49%), Gaps = 36/507 (7%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           ML+ GL+PD    + +I  L   G   +A +++  + + G++  IVTYN++++ +   G 
Sbjct: 298 MLKYGLVPDRYTFSTLIHGLCKVGSMEEALDLFERVTKEGMELEIVTYNSLINGYRLLGL 357

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
            +E  +++  M+G+G  P+ VTY +LI G   +G++E+   + +D+L  GL+++  +Y+ 
Sbjct: 358 TKEIPKIIQMMRGQGVEPDLVTYTILIAGHCESGDVEEGMKVRKDVLDQGLQLNIVTYSV 417

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS------------- 365
           ++    +KG+  E  NL  E+   G+   +  Y+ILI+G CK G +              
Sbjct: 418 LLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVCNAMCSSQ 477

Query: 366 -----------------------DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
                                  +AR     + RK    D++ YN ++ GY + G+I  A
Sbjct: 478 RVMPTSLNHFSILLGLCKKGLLVEARWYLENVARKYQPTDVVFYNVVIDGYAKLGDIVNA 537

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
             L+D++    + PT+VT N+L+ G C+ GDL++A+     +   G+LP  +TYT +++ 
Sbjct: 538 VRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYFRAIQLSGLLPTAVTYTTLMDA 597

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
             + G ++     F+EM+ K ++ +   Y+  + G  K     EA  + ++M +KG   D
Sbjct: 598 LSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCKQLRFDEAINVLKDMDSKGINAD 657

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
            ITYN L+ G C+  +++ A  +   M+  G +P  +TY  +I+     G + +   L  
Sbjct: 658 PITYNTLIQGFCESENVQMAFHIHDIMLCRGLVPTPVTYNLLINVLCLKGKVIQAEILLE 717

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
           ++   G+      YT LI A  A+G    A +   ++   G   ++  ++A IN LC+ +
Sbjct: 718 SLRENGIKLRKFAYTTLIKAQCAKGMPINAVLLVGKLLDAGFEASIEDFSAAINRLCKRQ 777

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTIL 669
              +A+     M   GI P+   Y +L
Sbjct: 778 FAKEAFMFVPIMLSVGIYPDTQIYCVL 804



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 109/354 (30%), Positives = 169/354 (47%), Gaps = 1/354 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNG-LLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKP 241
           Y K   +E+ L V N M  +  ++P   N   I+  L   G  V+AR     +       
Sbjct: 457 YCKLGEIEKALQVCNAMCSSQRVMPTSLNHFSILLGLCKKGLLVEARWYLENVARKYQPT 516

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
            +V YN ++D + K G++  A+ L  ++   G  P  VT N L+ G+ + G+L+ A    
Sbjct: 517 DVVFYNVVIDGYAKLGDIVNAVRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYF 576

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
           R +   GL  +A +Y  ++   SE G +   L+L +EMV + +     TY++++ GLCK 
Sbjct: 577 RAIQLSGLLPTAVTYTTLMDALSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCKQ 636

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
            R  +A +   +M  K +  D I+YNTL+ G+C S N+  AF + D +  R LVPT VTY
Sbjct: 637 LRFDEAINVLKDMDSKGINADPITYNTLIQGFCESENVQMAFHIHDIMLCRGLVPTPVTY 696

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           N LI+ LC  G +  A+ L E++   GI      YT ++   C  G    A     ++L 
Sbjct: 697 NLLINVLCLKGKVIQAEILLESLRENGIKLRKFAYTTLIKAQCAKGMPINAVLLVGKLLD 756

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
            G +     ++  I    K     EA+     ML+ G  PD   Y VL   L K
Sbjct: 757 AGFEASIEDFSAAINRLCKRQFAKEAFMFVPIMLSVGIYPDTQIYCVLGRALQK 810


>gi|125563733|gb|EAZ09113.1| hypothetical protein OsI_31378 [Oryza sativa Indica Group]
          Length = 618

 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 140/460 (30%), Positives = 224/460 (48%), Gaps = 41/460 (8%)

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
           N ++ G  +   L +   L  +ML  G+  S  +YN +I     +G + +A  + ++MV 
Sbjct: 142 NAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVA 201

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
           R + P + TY  +IY LC+   + DA   F EM    + P++ +YN L+  + +  NI  
Sbjct: 202 RRIDPNVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKH 261

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           A + + +L    LVP  V + TLIDGLC+   +  A+ +  +M    + P V  Y  +++
Sbjct: 262 ALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPVYNSLIH 321

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
           G+ + G    A  FF E++RK L+PD F  +  + G    G    A R  E M   G   
Sbjct: 322 GAFRSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIAL 381

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           +   YNVL+   CK G+L+EA     +M   G  P+ +TY+S+I    + G++     ++
Sbjct: 382 NAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIY 441

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
             M+ KG+ P +VTYT LIH HA  G ++ AF    EM+ KGI  N IT + L++GLCR 
Sbjct: 442 TEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRE 501

Query: 642 RRIDQA-----------------------------YGLFID------------MEEEGIL 660
            R+  A                             YGL+ID            M + G++
Sbjct: 502 NRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMV 561

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
           P+++TYT++I   C  G    A+ LY +M+   ++P  C 
Sbjct: 562 PDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVGVKPTKCA 601



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 141/459 (30%), Positives = 231/459 (50%), Gaps = 10/459 (2%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           ILD L+    K  M+ +   +F++ML  G++P V   N +I   R  G   KA EV+  M
Sbjct: 144 ILDGLV----KAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQM 199

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
               I P++VTY TM+ + C+E  + +A  L  EM+  G  PN  TYN L++   +   +
Sbjct: 200 VARRIDPNVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNI 259

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           + A     D+LK GL  +   +  +I G  +   + EA N+  +M    VAPT+  YN L
Sbjct: 260 KHALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPVYNSL 319

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           I+G  + G   +A   F E++RK + PD  + + ++ G C  G +  A    + ++   +
Sbjct: 320 IHGAFRSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGI 379

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
                 YN LID  C+ G+L+ A      M   G+ P+V+TY+ +++G  K G + +A  
Sbjct: 380 ALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMA 439

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
            + EM+ KG++P+   YT  I G  K GD   A+ LQ+EM  KG   + IT +VLV GLC
Sbjct: 440 IYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLC 499

Query: 535 KLGSLEEANELLRKMVG------DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           +   +++A   + +  G      +  I + +TY ++I+     G        F+ M   G
Sbjct: 500 RENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSG 559

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
           + P   TYT++I      G +  A M +++M   G++P 
Sbjct: 560 MVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVGVKPT 598



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 177/353 (50%), Gaps = 3/353 (0%)

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
           +L+  L +   + D     F  LR+  +P + + N +L G  ++  +   + LFDE+  R
Sbjct: 111 VLVIALSQMA-LPDEALSVFGRLRE--LPALPACNAILDGLVKAHMLARVWELFDEMLGR 167

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
            +VP+VVTYNTLI+     GD+  A ++ + M+ + I P+V+TYT M+   C+   +  A
Sbjct: 168 GMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMIYALCEEDCIGDA 227

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
              F EM   G++P+ + Y   ++   K  +   A     ++L  G  P+ + +  L+ G
Sbjct: 228 EGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDG 287

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           LCK   + EA  +   M      P    Y S+IH +   G  +     F  ++RK L P 
Sbjct: 288 LCKANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKELRPD 347

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
             T ++++      G++++A  +   MQ  GI  N   YN LI+  C+   +D+A     
Sbjct: 348 EFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCT 407

Query: 653 DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            M E G+ PN  TY+ LI+ +   G  + A+ +Y EM+ + +EP+  T++AL+
Sbjct: 408 RMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALI 460



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 184/360 (51%)

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P L   N ++ GL K   ++     F EML + ++P +++YNTL+      G++ +A+ +
Sbjct: 136 PALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEV 195

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
           +D++ +R + P VVTY T+I  LC    +  A+ L   M   G+ P++ TY  +++   K
Sbjct: 196 WDQMVARRIDPNVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFK 255

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
             N+  A  F+ ++L+ GL P+   +TT I G  K    +EA  +  +M      P +  
Sbjct: 256 RDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPV 315

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           YN L+HG  + G  +EA    ++++     PD  T + ++    + G ++        M 
Sbjct: 316 YNSLIHGAFRSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQ 375

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
           + G++     Y VLI  +   G L+ A +  + M   G+ PNV+TY++LI+G  +   ++
Sbjct: 376 QSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEME 435

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            A  ++ +M  +G+ PN  TYT LI+ +   G+   A  L KEM ++ I  +  T S L+
Sbjct: 436 IAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLV 495



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 87/355 (24%), Positives = 170/355 (47%), Gaps = 41/355 (11%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           + L+  + K+  ++  L+ +  +L+ GL+P+      +I  L       +A+ ++  M  
Sbjct: 247 NALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPR 306

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
           + + P++  YN+++    + G  QEAL    E+  +   P+  T ++++ G    G+++ 
Sbjct: 307 YEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQV 366

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A   +  M + G+ ++A +YN +I  Y + G L EAL     M   GV P + TY+ LI 
Sbjct: 367 ATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLID 426

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           G  K G +  A   + EM+ K V P++++Y  L++G+ ++G++  AF L  E+  + +  
Sbjct: 427 GHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYS 486

Query: 417 TVVTYNTLIDGLCRYGDLEVA---------QQLKEN------------------------ 443
             +T + L+DGLCR   ++ A         Q+  E                         
Sbjct: 487 NAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYN 546

Query: 444 --------MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
                   M + G++PD  TYT+++ G C +G +  A   + +M++ G++P + A
Sbjct: 547 EACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVGVKPTKCA 601



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 119/228 (52%)

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
           G +K    +  + L +EML +G  P ++TYN L++     G + +A E+  +MV     P
Sbjct: 147 GLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDP 206

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
           + +TYT++I+A  E   +     LF  M   G+ P L TY  L+ +H  R  ++ A +++
Sbjct: 207 NVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFY 266

Query: 617 SEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNA 676
            ++   G+ PN + +  LI+GLC+  RI +A  +F+DM    + P    Y  LI+    +
Sbjct: 267 YDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRS 326

Query: 677 GNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           G  QEAL  ++E++ +E+ PD  T S ++    D      A  +LE +
Sbjct: 327 GYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVM 374


>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
 gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
           Japonica Group]
 gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
          Length = 551

 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 128/417 (30%), Positives = 221/417 (52%), Gaps = 5/417 (1%)

Query: 257 GEMQEALELLWEMQGRGCSPNGVT---YNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           G +  A +LL   Q     P+ VT    +V++ G+ ++G +  AR L+ +M + G+KV+A
Sbjct: 121 GHLDTAADLLK--QAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNA 178

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
             YN ++  Y+ +        + + M   G+ PT+ TY IL+ GL     ++     F E
Sbjct: 179 LCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEE 238

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M  KN+  D+  Y++++  YCR+GN+  A  +FDE     + P   TY  LI+G C+ G 
Sbjct: 239 MKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQ 298

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           +E A+ L  +M  +G+  + I +  M++G C+   +  A E    M + G++ D + Y T
Sbjct: 299 MEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNT 358

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
              G  +     EA  L   M+ KG  P+ ++Y  L+   C  G + EA  L R+M G+G
Sbjct: 359 LACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNG 418

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
             P  +TY  ++   ++ G +R      N M +KGL P + +Y  L+H H   G++++A 
Sbjct: 419 AEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVAL 478

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
             F EM+ +G +PN++ Y ALI+GL +  R ++A+ L+ +M  +G+ P+   Y+ L+
Sbjct: 479 RLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALV 535



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/412 (31%), Positives = 211/412 (51%), Gaps = 13/412 (3%)

Query: 303 DMLKLGLKVSAHSYNP-----IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
           D+LK        S  P     ++ GY + G +  A  L +EM   GV      YN L   
Sbjct: 128 DLLKQAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSL--- 184

Query: 358 LCKWGRVSDARHRFFEMLR----KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           L  + R  D   R  EML+    + + P + +Y  L+ G   + +I +   +F+E++S+N
Sbjct: 185 LDAYTREKD-DDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKN 243

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           L   V  Y+++I+  CR G++  A ++ +  +  GI P+  TY  ++NG CK+G +  A 
Sbjct: 244 LSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAE 303

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
               +M  +G+  ++  + T I G  +     +A  ++  M   G   D+ TYN L  GL
Sbjct: 304 MLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGL 363

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
            +   ++EA  LLR M+  G  P+H++YT++I      GD+   R LF  M   G  P+L
Sbjct: 364 RRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSL 423

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
           VTY V++  +  +G +  A  + +EM+ KG+ P++ +Y AL++G C   ++D A  LF +
Sbjct: 424 VTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEE 483

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           M++ G  PN   YT LI+     G  +EA +LY  ML   + PD   +SAL+
Sbjct: 484 MKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALV 535



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 201/395 (50%)

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           ++ + ++D +CK G +  A +LL EM   G   N + YN L+  ++R  + ++   +++ 
Sbjct: 144 LSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKV 203

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M   G++ +  +Y  ++ G S    + +   + EEM ++ ++  +  Y+ +I   C+ G 
Sbjct: 204 MENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGN 263

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           V  A   F E +   + P+  +Y  L+ G+C+ G +  A +L  +++ R +    + +NT
Sbjct: 264 VRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNT 323

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           +IDG CR   ++ A ++K  M   GI  DV TY  +  G  +   +  A+     M+ KG
Sbjct: 324 MIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKG 383

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           ++P+  +YTT I+     GD  EA RL  EM   G  P L+TYNV++ G  K GS+ EA 
Sbjct: 384 VRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAE 443

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
               +M   G +PD  +Y +++H     G +     LF  M ++G  P LV YT LI   
Sbjct: 444 RFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGL 503

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           A  GR E AF  +  M   G+ P+   Y+AL+  L
Sbjct: 504 AKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSL 538



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/355 (31%), Positives = 189/355 (53%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL  YT++   ++   +   M   G+ P V     ++  L       K   V+  M    
Sbjct: 184 LLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKN 243

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           +   +  Y+++++++C+ G ++ A E+  E  G G  PN  TY  LI GF + G++E A 
Sbjct: 244 LSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAE 303

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L+ DM   G+ ++   +N +I GY  K ++ +AL ++  M   G+   + TYN L  GL
Sbjct: 304 MLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGL 363

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
            +  R+ +A++    M+ K V P+ +SY TL+  +C  G++ EA  LF E+      P++
Sbjct: 364 RRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSL 423

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           VTYN ++DG  + G +  A++ K  M  +G++PD+ +Y  +V+G C  G + +A   F E
Sbjct: 424 VTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEE 483

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
           M ++G +P+  AYT  I+G  K G + EA++L + ML  G  PD   Y+ LV  L
Sbjct: 484 MKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSL 538



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 180/380 (47%), Gaps = 35/380 (9%)

Query: 221 NGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVT 280
           +G    AR++   M   G+K + + YN++LD++ +E +     E+L  M+  G  P   T
Sbjct: 156 SGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGT 215

Query: 281 YNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV 340
           Y +L+ G S   ++ +   +  +M    L    + Y+ +I  Y   G +  A  + +E V
Sbjct: 216 YTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECV 275

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
             G+ P   TY  LI G CK G++  A     +M  + V  + I +NT++ GYCR   + 
Sbjct: 276 GNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVD 335

Query: 401 EAFLL----------------------------FDELRS-------RNLVPTVVTYNTLI 425
           +A  +                             DE ++       + + P  V+Y TLI
Sbjct: 336 KALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLI 395

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
              C  GD+  A++L   M   G  P ++TY +M++G  K G++  A  F NEM +KGL 
Sbjct: 396 SIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLV 455

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           PD ++Y   + G    G    A RL EEM  +G  P+L+ Y  L+ GL K G  EEA +L
Sbjct: 456 PDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQL 515

Query: 546 LRKMVGDGFIPDHITYTSII 565
              M+GDG  PD   Y++++
Sbjct: 516 YDNMLGDGLTPDDALYSALV 535


>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
          Length = 475

 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 128/417 (30%), Positives = 221/417 (52%), Gaps = 5/417 (1%)

Query: 257 GEMQEALELLWEMQGRGCSPNGVT---YNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           G +  A +LL   Q     P+ VT    +V++ G+ ++G +  AR L+ +M + G+KV+A
Sbjct: 45  GHLDTAADLLK--QAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNA 102

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
             YN ++  Y+ +        + + M   G+ PT+ TY IL+ GL     ++     F E
Sbjct: 103 LCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEE 162

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M  KN+  D+  Y++++  YCR+GN+  A  +FDE     + P   TY  LI+G C+ G 
Sbjct: 163 MKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQ 222

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           +E A+ L  +M  +G+  + I +  M++G C+   +  A E    M + G++ D + Y T
Sbjct: 223 MEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNT 282

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
              G  +     EA  L   M+ KG  P+ ++Y  L+   C  G + EA  L R+M G+G
Sbjct: 283 LACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNG 342

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
             P  +TY  ++   ++ G +R      N M +KGL P + +Y  L+H H   G++++A 
Sbjct: 343 AEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVAL 402

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
             F EM+ +G +PN++ Y ALI+GL +  R ++A+ L+ +M  +G+ P+   Y+ L+
Sbjct: 403 RLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALV 459



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/412 (31%), Positives = 211/412 (51%), Gaps = 13/412 (3%)

Query: 303 DMLKLGLKVSAHSYNP-----IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
           D+LK        S  P     ++ GY + G +  A  L +EM   GV      YN L   
Sbjct: 52  DLLKQAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSL--- 108

Query: 358 LCKWGRVSDARHRFFEMLR----KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           L  + R  D   R  EML+    + + P + +Y  L+ G   + +I +   +F+E++S+N
Sbjct: 109 LDAYTREKD-DDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKN 167

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           L   V  Y+++I+  CR G++  A ++ +  +  GI P+  TY  ++NG CK+G +  A 
Sbjct: 168 LSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAE 227

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
               +M  +G+  ++  + T I G  +     +A  ++  M   G   D+ TYN L  GL
Sbjct: 228 MLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGL 287

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
            +   ++EA  LLR M+  G  P+H++YT++I      GD+   R LF  M   G  P+L
Sbjct: 288 RRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSL 347

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
           VTY V++  +  +G +  A  + +EM+ KG+ P++ +Y AL++G C   ++D A  LF +
Sbjct: 348 VTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEE 407

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           M++ G  PN   YT LI+     G  +EA +LY  ML   + PD   +SAL+
Sbjct: 408 MKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALV 459



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 201/395 (50%)

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           ++ + ++D +CK G +  A +LL EM   G   N + YN L+  ++R  + ++   +++ 
Sbjct: 68  LSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKV 127

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M   G++ +  +Y  ++ G S    + +   + EEM ++ ++  +  Y+ +I   C+ G 
Sbjct: 128 MENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGN 187

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           V  A   F E +   + P+  +Y  L+ G+C+ G +  A +L  +++ R +    + +NT
Sbjct: 188 VRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNT 247

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           +IDG CR   ++ A ++K  M   GI  DV TY  +  G  +   +  A+     M+ KG
Sbjct: 248 MIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKG 307

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           ++P+  +YTT I+     GD  EA RL  EM   G  P L+TYNV++ G  K GS+ EA 
Sbjct: 308 VRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAE 367

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
               +M   G +PD  +Y +++H     G +     LF  M ++G  P LV YT LI   
Sbjct: 368 RFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGL 427

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           A  GR E AF  +  M   G+ P+   Y+AL+  L
Sbjct: 428 AKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSL 462



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 111/355 (31%), Positives = 189/355 (53%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL  YT++   ++   +   M   G+ P V     ++  L       K   V+  M    
Sbjct: 108 LLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKN 167

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           +   +  Y+++++++C+ G ++ A E+  E  G G  PN  TY  LI GF + G++E A 
Sbjct: 168 LSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAE 227

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L+ DM   G+ ++   +N +I GY  K ++ +AL ++  M   G+   + TYN L  GL
Sbjct: 228 MLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGL 287

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
            +  R+ +A++    M+ K V P+ +SY TL+  +C  G++ EA  LF E+      P++
Sbjct: 288 RRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSL 347

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           VTYN ++DG  + G +  A++ K  M  +G++PD+ +Y  +V+G C  G + +A   F E
Sbjct: 348 VTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEE 407

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
           M ++G +P+  AYT  I+G  K G + EA++L + ML  G  PD   Y+ LV  L
Sbjct: 408 MKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSL 462



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 180/380 (47%), Gaps = 35/380 (9%)

Query: 221 NGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVT 280
           +G    AR++   M   G+K + + YN++LD++ +E +     E+L  M+  G  P   T
Sbjct: 80  SGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGT 139

Query: 281 YNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV 340
           Y +L+ G S   ++ +   +  +M    L    + Y+ +I  Y   G +  A  + +E V
Sbjct: 140 YTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECV 199

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
             G+ P   TY  LI G CK G++  A     +M  + V  + I +NT++ GYCR   + 
Sbjct: 200 GNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVD 259

Query: 401 EAFLL----------------------------FDELRS-------RNLVPTVVTYNTLI 425
           +A  +                             DE ++       + + P  V+Y TLI
Sbjct: 260 KALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLI 319

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
              C  GD+  A++L   M   G  P ++TY +M++G  K G++  A  F NEM +KGL 
Sbjct: 320 SIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLV 379

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           PD ++Y   + G    G    A RL EEM  +G  P+L+ Y  L+ GL K G  EEA +L
Sbjct: 380 PDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQL 439

Query: 546 LRKMVGDGFIPDHITYTSII 565
              M+GDG  PD   Y++++
Sbjct: 440 YDNMLGDGLTPDDALYSALV 459


>gi|297610666|ref|NP_001064867.2| Os10g0479200 [Oryza sativa Japonica Group]
 gi|255679497|dbj|BAF26781.2| Os10g0479200 [Oryza sativa Japonica Group]
          Length = 818

 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 164/553 (29%), Positives = 278/553 (50%), Gaps = 7/553 (1%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           + D L   Y +  MV   L V +KM    +   V   + ++  LR    +  A E++  M
Sbjct: 153 VWDALANSYARAQMVHDALYVLSKMSSLNMQISVFTYDSLLHGLR---MTDVALELFEEM 209

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG-CSPNGVTYNVLITGFSRNGE 293
              G+ PS  +++ +++  CK+ ++ EAL  L E +  G   P G+T+N+L++     G 
Sbjct: 210 ESCGVSPSEYSHSIIINGLCKQDKVGEALSFLQEARKEGKFKPLGMTFNILMSALCNWGF 269

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           ++ A+  +  MLK GL    ++++ +I G  + G + EAL+L E +   G+   + TYN 
Sbjct: 270 VQSAKSFLCLMLKYGLVPDRYTFSTLIHGLCKVGSMEEALDLFERVTKEGMELEIVTYNS 329

Query: 354 LIYGLCKWGRVSDARHRFFEMLR-KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
           LI G    G   +   +  +M+R + V PD+++Y  L+ G+C SG++ E   +  ++  +
Sbjct: 330 LINGYRLLGLTKEI-PKIIQMMRGQGVEPDLVTYTILIAGHCESGDVEEGMKVRKDVLDQ 388

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
            L   +VTY+ L++ L + G       L   + N G+  DVI Y+I+++G CK+G +  A
Sbjct: 389 GLQLNIVTYSVLLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKA 448

Query: 473 REFFNEMLR-KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
            +  N M   + + P    + + + G  K G   EA    E +  K  P D++ YNV++ 
Sbjct: 449 LQVCNAMCSSQRVMPTSLNHFSILLGLCKKGLLVEARWYLENVARKYQPTDVVFYNVVID 508

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           G  KLG +  A  L  ++   G  P  +T  S+++   ++GDL+     F  +   GL P
Sbjct: 509 GYAKLGDIVNAVRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYFRAIQLSGLLP 568

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
           T VTYT L+ A +  G +      F EM  K I+ N +TY+ ++ GLC+  R D+A  + 
Sbjct: 569 TAVTYTTLMDALSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCKQLRFDEAINVL 628

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDK 711
            DM+ +GI  +  TY  LI   C + N Q A  ++  ML R + P   T++ L+     K
Sbjct: 629 KDMDSKGINADPITYNTLIQGFCESENVQMAFHIHDIMLCRGLVPTPVTYNLLINVLCLK 688

Query: 712 DYKVHAVEYLESL 724
              + A   LESL
Sbjct: 689 GKVIQAEILLESL 701



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 140/513 (27%), Positives = 252/513 (49%), Gaps = 44/513 (8%)

Query: 257 GEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSY 316
           G      ++LW  + R C  NG  ++ L   ++R   +  A  ++  M  L +++S  +Y
Sbjct: 131 GSAAALCDILWN-RFRECDSNGCVWDALANSYARAQMVHDALYVLSKMSSLNMQISVFTY 189

Query: 317 NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK---------------- 360
           + ++ G     +   AL L EEM + GV+P+  +++I+I GLCK                
Sbjct: 190 DSLLHGLRMTDV---ALELFEEMESCGVSPSEYSHSIIINGLCKQDKVGEALSFLQEARK 246

Query: 361 --------------------WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
                               WG V  A+     ML+  ++PD  +++TL++G C+ G++ 
Sbjct: 247 EGKFKPLGMTFNILMSALCNWGFVQSAKSFLCLMLKYGLVPDRYTFSTLIHGLCKVGSME 306

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           EA  LF+ +    +   +VTYN+LI+G    G  +   ++ + M  QG+ PD++TYTI++
Sbjct: 307 EALDLFERVTKEGMELEIVTYNSLINGYRLLGLTKEIPKIIQMMRGQGVEPDLVTYTILI 366

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
            G C+ G++    +   ++L +GLQ +   Y+  +    K G   E   L  E+   G  
Sbjct: 367 AGHCESGDVEEGMKVRKDVLDQGLQLNIVTYSVLLNALFKKGMFCEIDNLLGEIYNIGLD 426

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDG-FIPDHITYTSIIHASLEMGDLRRGRD 579
            D+I Y++L+HG CKLG +E+A ++   M      +P  + + SI+    + G L   R 
Sbjct: 427 MDVIAYSILIHGYCKLGEIEKALQVCNAMCSSQRVMPTSLNHFSILLGLCKKGLLVEARW 486

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
              N+ RK     +V Y V+I  +A  G +  A   + ++ V G+ P ++T N+L+ G C
Sbjct: 487 YLENVARKYQPTDVVFYNVVIDGYAKLGDIVNAVRLYDQITVAGMHPTIVTCNSLLYGYC 546

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
           ++  +  A   F  ++  G+LP   TYT L++    AG     L L+ EM+ + I+ +  
Sbjct: 547 KIGDLQLAESYFRAIQLSGLLPTAVTYTTLMDALSEAGEVNTMLSLFDEMVAKRIKANAV 606

Query: 700 THSAL---LLKQLDKDYKVHAVEYLESLTLGAE 729
           T+S +   L KQL  D  ++ ++ ++S  + A+
Sbjct: 607 TYSVIVKGLCKQLRFDEAINVLKDMDSKGINAD 639



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 134/507 (26%), Positives = 250/507 (49%), Gaps = 36/507 (7%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           ML+ GL+PD    + +I  L   G   +A +++  + + G++  IVTYN++++ +   G 
Sbjct: 280 MLKYGLVPDRYTFSTLIHGLCKVGSMEEALDLFERVTKEGMELEIVTYNSLINGYRLLGL 339

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
            +E  +++  M+G+G  P+ VTY +LI G   +G++E+   + +D+L  GL+++  +Y+ 
Sbjct: 340 TKEIPKIIQMMRGQGVEPDLVTYTILIAGHCESGDVEEGMKVRKDVLDQGLQLNIVTYSV 399

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS------------- 365
           ++    +KG+  E  NL  E+   G+   +  Y+ILI+G CK G +              
Sbjct: 400 LLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVCNAMCSSQ 459

Query: 366 -----------------------DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
                                  +AR     + RK    D++ YN ++ GY + G+I  A
Sbjct: 460 RVMPTSLNHFSILLGLCKKGLLVEARWYLENVARKYQPTDVVFYNVVIDGYAKLGDIVNA 519

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
             L+D++    + PT+VT N+L+ G C+ GDL++A+     +   G+LP  +TYT +++ 
Sbjct: 520 VRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYFRAIQLSGLLPTAVTYTTLMDA 579

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
             + G ++     F+EM+ K ++ +   Y+  + G  K     EA  + ++M +KG   D
Sbjct: 580 LSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCKQLRFDEAINVLKDMDSKGINAD 639

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
            ITYN L+ G C+  +++ A  +   M+  G +P  +TY  +I+     G + +   L  
Sbjct: 640 PITYNTLIQGFCESENVQMAFHIHDIMLCRGLVPTPVTYNLLINVLCLKGKVIQAEILLE 699

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
           ++   G+      YT LI A  A+G    A +   ++   G   ++  ++A IN LC+ +
Sbjct: 700 SLRENGIKLRKFAYTTLIKAQCAKGMPINAVLLVGKLLDAGFEASIEDFSAAINRLCKRQ 759

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTIL 669
              +A+     M   GI P+   Y +L
Sbjct: 760 FAKEAFMFVPIMLSVGIYPDTQIYCVL 786



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 172/359 (47%), Gaps = 1/359 (0%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNG-LLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           +L+  Y K   +E+ L V N M  +  ++P   N   I+  L   G  V+AR     +  
Sbjct: 434 ILIHGYCKLGEIEKALQVCNAMCSSQRVMPTSLNHFSILLGLCKKGLLVEARWYLENVAR 493

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
                 +V YN ++D + K G++  A+ L  ++   G  P  VT N L+ G+ + G+L+ 
Sbjct: 494 KYQPTDVVFYNVVIDGYAKLGDIVNAVRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQL 553

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A    R +   GL  +A +Y  ++   SE G +   L+L +EMV + +     TY++++ 
Sbjct: 554 AESYFRAIQLSGLLPTAVTYTTLMDALSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVK 613

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           GLCK  R  +A +   +M  K +  D I+YNTL+ G+C S N+  AF + D +  R LVP
Sbjct: 614 GLCKQLRFDEAINVLKDMDSKGINADPITYNTLIQGFCESENVQMAFHIHDIMLCRGLVP 673

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
           T VTYN LI+ LC  G +  A+ L E++   GI      YT ++   C  G    A    
Sbjct: 674 TPVTYNLLINVLCLKGKVIQAEILLESLRENGIKLRKFAYTTLIKAQCAKGMPINAVLLV 733

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
            ++L  G +     ++  I    K     EA+     ML+ G  PD   Y VL   L K
Sbjct: 734 GKLLDAGFEASIEDFSAAINRLCKRQFAKEAFMFVPIMLSVGIYPDTQIYCVLGRALQK 792


>gi|15225722|ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630
 gi|20197234|gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330253613|gb|AEC08707.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 624

 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 139/462 (30%), Positives = 238/462 (51%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           DL+  +Y    M E+ L VF+ M++ GL  D ++C   +   +         E++R M +
Sbjct: 158 DLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVD 217

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G+K ++ +   +++  C+ GE++++ +L+ E   +G  P   TYN +I  + +  +   
Sbjct: 218 SGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSG 277

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
             G+++ M K G+  +  +Y  ++    + G + +A  L +EM  RG+   +  Y  LI 
Sbjct: 278 VEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLIS 337

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
             C+ G +  A   F E+  K + P   +Y  L+ G C+ G +G A +L +E++S+ +  
Sbjct: 338 WNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNI 397

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
           T V +NTLIDG CR G ++ A  + + M  +G   DV T   + +   ++     A+++ 
Sbjct: 398 TQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWL 457

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
             M+  G++    +YT  I    K G+  EA RL  EM +KG  P+ ITYNV+++  CK 
Sbjct: 458 FRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQ 517

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G ++EA +L   M  +G  PD  TYTS+IH      ++     LF+ M  KGL    VTY
Sbjct: 518 GKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTY 577

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           TV+I   +  G+ + AF  + EM+ KG   +   Y ALI  +
Sbjct: 578 TVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 225/453 (49%)

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
           +   G  +E L +   M  +G S +  +  V +    +   ++    + R M+  G+K++
Sbjct: 164 YVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKIT 223

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
            +S   ++ G   +G + ++  L +E   +G+ P   TYN +I    K    S       
Sbjct: 224 VYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLK 283

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
            M +  V+ + ++Y  L+    ++G + +A  LFDE+R R +   V  Y +LI   CR G
Sbjct: 284 VMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKG 343

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
           +++ A  L + +  +G+ P   TY  +++G CK+G +  A    NEM  KG+   +  + 
Sbjct: 344 NMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFN 403

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
           T I G  + G   EA  + + M  KGF  D+ T N +     +L   +EA + L +M+  
Sbjct: 404 TLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEG 463

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
           G     ++YT++I    + G++   + LF  M  KG+ P  +TY V+I+A+  +G+++ A
Sbjct: 464 GVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEA 523

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
               + M+  G+ P+  TY +LI+G C    +D+A  LF +M  +G+  N  TYT++I+ 
Sbjct: 524 RKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISG 583

Query: 673 NCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
              AG   EA  LY EM  +    D   ++AL+
Sbjct: 584 LSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616


>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
          Length = 792

 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 162/552 (29%), Positives = 249/552 (45%), Gaps = 37/552 (6%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKA-REVYRMMGEFGIKPSIVTYN 247
            ++ L V  KM   G  P     + ++ VL   G   +A R   +M+   G K  +V   
Sbjct: 236 ADRALQVLGKMREAGFEPWELTYSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLAT 295

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
            ++  +C  GE+ +AL+L  E+   G +P  VTY VLI G    G  ++   L R M++ 
Sbjct: 296 MLMHGYCLHGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQ 355

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           GL +S + +N +I G        +A+ L E +V  GV P + TY  LI+ LCK  ++ +A
Sbjct: 356 GLLLSTYEFNLVIKGLLRDKRWKDAIGLLELVVDTGV-PDVFTYGCLIHWLCKHQKLHEA 414

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
            + + +M    V P I++Y++LL GYC  G + EA  L+ E+  +   P  VTY TL+ G
Sbjct: 415 VNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKG 474

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
             +    + A  L   M   G+     TY I++NG   +  +    E     L +G  P 
Sbjct: 475 YIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPT 534

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              Y + I G +K G    A+ +  +M  KG  P+++TY   + G C+    + A +LL 
Sbjct: 535 TMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLI 594

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY----------- 596
            +  DG  PD   Y + I    + G++ R       +L+ GL+P +  Y           
Sbjct: 595 YVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLK 654

Query: 597 ------------------------TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
                                   T LI   +  G +  A   +SEM    + P+  T+ 
Sbjct: 655 MMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFT 714

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
           AL +GLCR   ID A  L  DM    + PN  TY +LIN     G  QEA +L+ EML  
Sbjct: 715 ALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSS 774

Query: 693 EIEPDYCTHSAL 704
            + PD  T+  L
Sbjct: 775 GVVPDDTTYDIL 786



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 138/450 (30%), Positives = 233/450 (51%), Gaps = 3/450 (0%)

Query: 186 KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK-VLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           + M ++   +  +M+  GLL      N +IK +LRD  +   A  +  ++ + G+ P + 
Sbjct: 339 EGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWK-DAIGLLELVVDTGV-PDVF 396

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY  ++   CK  ++ EA+ L  +M+  G  P+ VTY+ L+ G+   G +++A  L  +M
Sbjct: 397 TYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEM 456

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
              G   +  +Y  ++ GY +K     A  L  EM   GV+    TYNILI GL    RV
Sbjct: 457 PDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRV 516

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            +        L +  +P  ++YN+++ G+ ++G +G AF ++ ++R + + P +VTY + 
Sbjct: 517 CEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSF 576

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           IDG CR    ++A +L   +   GI PD+  Y   ++  CK GN+S A  F   +L+ GL
Sbjct: 577 IDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGL 636

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            PD   Y + + G   L   +EA +    M+ +    D   Y  L+ G  K+G++  A E
Sbjct: 637 TPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALE 696

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           L  +M+ +  IPD  T+T++ H     GD+   + L ++M R  +SP +VTY +LI+A  
Sbjct: 697 LYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACV 756

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNAL 634
             G+L+ AF    EM   G+ P+  TY+ L
Sbjct: 757 RDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 146/529 (27%), Positives = 258/529 (48%), Gaps = 4/529 (0%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL+   + +     L +F++M   G   D K  + +I+     G    A  ++  M   G
Sbjct: 156 LLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAG 215

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           +KP    Y   +   CK  +   AL++L +M+  G  P  +TY+ ++    + G +++A 
Sbjct: 216 VKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVGRMDEAL 275

Query: 299 GLIRDM-LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
            L   M L  G K+       ++ GY   G + +AL+L +E+V+ GV PT  TY +LI G
Sbjct: 276 RLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVVSDGVTPTNVTYGVLIKG 335

Query: 358 LCKWGRVSDARHRFF-EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
            C    +SD  ++   +M+ + ++     +N ++ G  R     +A  L  EL     VP
Sbjct: 336 -CDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLL-ELVVDTGVP 393

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
            V TY  LI  LC++  L  A  L + M   G+ P ++TY  ++ G C+ G +  A + +
Sbjct: 394 DVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLY 453

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           +EM  KG  P+   YTT + G +K      AY L  EM   G      TYN+L++GL  +
Sbjct: 454 SEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMV 513

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
             + E +E+L++ + +GF+P  +TY SII+  ++ G +     ++  M +KG++P +VTY
Sbjct: 514 NRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTY 573

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
           T  I  +      +LA      ++  GI+P++  YNA I+  C+   + +A    + + +
Sbjct: 574 TSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLK 633

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +G+ P+   Y   +    N     EA + Y  M+ + +  D   ++ L+
Sbjct: 634 DGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLI 682



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 145/510 (28%), Positives = 226/510 (44%), Gaps = 35/510 (6%)

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
           Y  M   G+ P   +   +L +  +     +AL L  EM+G+GC  +   Y+V+I    R
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
            G    A  L  +M   G+K     Y   I G  +      AL +  +M   G  P   T
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257

Query: 351 YNILIYGLCKWGRVSDA-RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           Y+ ++  L K GR+ +A R +   +L      D++    L++GYC  G +G+A  LFDE+
Sbjct: 258 YSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEV 317

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL------------------- 450
            S  + PT VTY  LI G    G  +   +L   MI QG+L                   
Sbjct: 318 VSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRW 377

Query: 451 ---------------PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
                          PDV TY  +++  CK   L  A   +++M   G++P    Y + +
Sbjct: 378 KDAIGLLELVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLL 437

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
            G  + G   EA +L  EM  KGFPP+ +TY  L+ G  K  + + A  LL +M  +G  
Sbjct: 438 LGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVS 497

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
               TY  +I+    +  +    ++    L +G  PT +TY  +I+     G +  AF  
Sbjct: 498 CGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGM 557

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
           + +M+ KGI PN++TY + I+G CR    D A  L I +  +GI P+   Y   I+  C 
Sbjct: 558 YRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCK 617

Query: 676 AGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            GN   AL     +L   + PD   +++ +
Sbjct: 618 QGNMSRALHFLVLLLKDGLTPDVTVYNSFV 647


>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
          Length = 602

 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 152/504 (30%), Positives = 240/504 (47%), Gaps = 8/504 (1%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           PD    NR+++ L   G   +  +  R++G  G   ++V Y  + D +C+ G + +A  +
Sbjct: 101 PDAALANRLVRDLCRRG---RPDDAERVVGACGPAATVVAYGALTDGYCRAGRLGDARRV 157

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           +  M      PN  TYN LI      G++  A  ++ DML  G      +YN ++    +
Sbjct: 158 VGGMP---VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCK 214

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
                +A+ L + M   G  P   TYN+L+ G+C  G V DA      +      P  ++
Sbjct: 215 GRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVN 274

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           YNT+L G C +   G+A  L  E+   N  P   T+N +I  LCR G L+ A QL E M 
Sbjct: 275 YNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMS 334

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
             G   +++TY  ++NG C+  N+  A    ++M   G +PD   Y T + G        
Sbjct: 335 KHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWV 394

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           +A  L + M   G  PD +T+N L+  LC+ G + +A E+ ++M   G  P+ ITY++II
Sbjct: 395 DAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTII 454

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
               +   L +  +LFN M  KG +P  + Y +L         +E A     ++Q  GI 
Sbjct: 455 SGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGIS 513

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           P+ + YNA++ GLCR  + + A  +   M   G +P+  TY ILI      G   EA  L
Sbjct: 514 PHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEAREL 573

Query: 686 YKEMLDREIEPDYCTHS-ALLLKQ 708
             ++  R++  +    S ALLL Q
Sbjct: 574 LIKLCSRDVLVNSLIKSEALLLDQ 597



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 135/405 (33%), Positives = 204/405 (50%), Gaps = 7/405 (1%)

Query: 181 LIYT--KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LI+T  ++  V   L V + ML  G  PDV   N +++         +A E+  +M   G
Sbjct: 173 LIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEG 232

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
             P+ VTYN ++D  C EG++ +ALELL  +   GC P+ V YN ++ G         A 
Sbjct: 233 CTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDAD 292

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L+ +ML+     +  ++N +I     KGLL +A+ L E+M   G    + TYN +I GL
Sbjct: 293 ELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGL 352

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C+   V  A     +M      PDI++YNTLL G C +    +A  L D +     +P  
Sbjct: 353 CEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDN 412

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           VT+NTLI  LC+ G +  A ++ + M ++G  P+ ITY+ +++G  K   L  A E FNE
Sbjct: 413 VTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNE 472

Query: 479 MLRKGLQPDRFAYTTQIAGE-LKLGDT-SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           M  KG  PD+     Q+  E L   DT  EA +   ++   G  P  + YN ++ GLC+ 
Sbjct: 473 MGHKGFNPDKI---YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRN 529

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           G  E A +++  MV  G +PD +TY  +I      G L   R+L 
Sbjct: 530 GKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELL 574



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 200/431 (46%), Gaps = 17/431 (3%)

Query: 120 VKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCV-SIKILDL 178
           V+ + + +  ++  L E G +R A  V++ ++C                 C   +   ++
Sbjct: 163 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLC---------------RGCAPDVVTYNI 207

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL    K     Q + + + M   G  P+    N ++  +   G    A E+ R +   G
Sbjct: 208 LLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHG 267

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
            KPS V YNT+L   C      +A EL+ EM    C PN  T+NV+I    R G L+QA 
Sbjct: 268 CKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAI 327

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L+  M K G   +  +YN II G  E+  +  A+ L  +M + G  P + TYN L+ GL
Sbjct: 328 QLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGL 387

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C   +  DA      M +   +PD +++NTL+   C+ G + +A  +F ++  +   P  
Sbjct: 388 CSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNS 447

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           +TY+T+I GL +   L+ A +L   M ++G  PD I Y ++         +  A +   +
Sbjct: 448 ITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRK 506

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           +   G+ P    Y   + G  + G T  A  +   M++ G  PD +TY +L+ GL   G 
Sbjct: 507 LQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGY 566

Query: 539 LEEANELLRKM 549
           L EA ELL K+
Sbjct: 567 LNEARELLIKL 577



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/359 (30%), Positives = 164/359 (45%), Gaps = 8/359 (2%)

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
           DA  R  E   +   PD    N L+   CR G   +A  +           TVV Y  L 
Sbjct: 88  DAALRLVESSPRP--PDAALANRLVRDLCRRGRPDDAERVVGACGP---AATVVAYGALT 142

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           DG CR G L  A+++   M  Q   P+  TY  +++  C+ G +  A    ++ML +G  
Sbjct: 143 DGYCRAGRLGDARRVVGGMPVQ---PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCA 199

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           PD   Y   +    K     +A  L + M A+G  P+ +TYNVL+ G+C  G +++A EL
Sbjct: 200 PDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALEL 259

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
           LR +   G  P  + Y +++             +L   MLR+   P   T+ V+I++   
Sbjct: 260 LRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCR 319

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
           +G L+ A     +M   G   N++TYNA+INGLC  R +D A GL   M+  G  P+  T
Sbjct: 320 KGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVT 379

Query: 666 YTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           Y  L+   C+A  W +A  L   M      PD  T + L+     K   V A+E  + +
Sbjct: 380 YNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQM 438



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 109/253 (43%), Gaps = 32/253 (12%)

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL--------------- 546
           GD   A RL E   +   PPD    N LV  LC+ G  ++A  ++               
Sbjct: 85  GDLDAALRLVE---SSPRPPDAALANRLVRDLCRRGRPDDAERVVGACGPAATVVAYGAL 141

Query: 547 -------------RKMVGDGFI-PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
                        R++VG   + P+  TY  +IH   E G +R    + ++ML +G +P 
Sbjct: 142 TDGYCRAGRLGDARRVVGGMPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPD 201

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
           +VTY +L+ A         A      M+ +G  PN +TYN L++G+C    +D A  L  
Sbjct: 202 VVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLR 261

Query: 653 DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
           ++   G  P+   Y  ++   C+A  W +A  L  EML     P+  T + ++     K 
Sbjct: 262 NLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKG 321

Query: 713 YKVHAVEYLESLT 725
               A++ LE ++
Sbjct: 322 LLQQAIQLLEKMS 334


>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
          Length = 615

 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 141/439 (32%), Positives = 229/439 (52%), Gaps = 12/439 (2%)

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM---QGRGCSPNGVTYNVLIT 286
           V R M E G  P + +YN +L   C E   QEALELL  M   +G G  P+ V+YN ++ 
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209

Query: 287 GFSRNG--------ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
           GF + G         +++A  ++  M+K G+     +YN I+ GY   G   EA+   ++
Sbjct: 210 GFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKK 269

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
           M + GV P + TY+ L+  LCK GR ++AR  F  M ++ + PDI +Y TLL G+C+ G 
Sbjct: 270 MRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGR 329

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           + E+  LFD +    + P ++TYNTLIDG C  G ++ A +L  +M++ G+ PD++TY  
Sbjct: 330 VIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGT 389

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           ++NG C++  +  A   F EM+  G+ P+   Y   + G      T+ A  L   +   G
Sbjct: 390 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG 449

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
              +L TYN+++HGLCK    +EA  + + +       +  T+  +I A L+ G +   +
Sbjct: 450 TQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAK 509

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           DLF      GL P + TY+++      +G LE     F  M+  G   +    N+++  L
Sbjct: 510 DLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKL 569

Query: 639 CRLRRIDQAYGLFIDMEEE 657
            +   I +A G ++ M +E
Sbjct: 570 LQRGDITRA-GTYLFMIDE 587



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 143/541 (26%), Positives = 261/541 (48%), Gaps = 14/541 (2%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM--GEFGIKPSIVTYNTMLDS 252
           VF+++LR G    +   NR +  +  +  +       RM   G   + P++ TY  ++  
Sbjct: 42  VFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIGC 101

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI-RDMLKLGLKV 311
            C+ G +      L  +  +G   + +T+  L+ G   +     A  ++ R M +LG   
Sbjct: 102 CCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIP 161

Query: 312 SAHSYNPIICGYSEKGLLVEALNLEEEMVTR---GVAPTLATYNILIYGLCKWG----RV 364
              SYN ++ G  ++    EAL L   M      G  P + +YN ++ G  K G      
Sbjct: 162 DVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLT 221

Query: 365 SDARHRFFE----MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
           + A  +  E    M++  V+PD ++YN++L+GYC SG   EA     ++RS  + P VVT
Sbjct: 222 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVT 281

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y++L++ LC+ G    A+++ ++M  +G+ PD+ TY  ++ G CK G +  + + F+ M+
Sbjct: 282 YSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMV 341

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           R G++PD   Y T I G    G   EA +L   M++ G  PD++TY  L++G C++  ++
Sbjct: 342 RIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMD 401

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           +A  L ++MV  G  P+ ITY  I+            ++L+ ++ + G    L TY +++
Sbjct: 402 DALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIIL 461

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
           H        + A   F  + +  ++    T+N +I  L +  R+D+A  LF      G++
Sbjct: 462 HGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLV 521

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
           P+  TY+++       G+ +E   L+  M +     D    ++++ K L +     A  Y
Sbjct: 522 PDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTY 581

Query: 721 L 721
           L
Sbjct: 582 L 582



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 140/456 (30%), Positives = 231/456 (50%), Gaps = 11/456 (2%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           +I    LL  +   K   +   +V  +M   G +PDV + N ++K L D   S +A E+ 
Sbjct: 127 AITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELL 186

Query: 232 RMMGE---FGIKPSIVTYNTMLDSFCKEG--------EMQEALELLWEMQGRGCSPNGVT 280
            MM +    G  P +V+YNT+L+ F KEG         M +A+E+L  M   G  P+ +T
Sbjct: 187 HMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMT 246

Query: 281 YNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV 340
           YN ++ G+  +G+ ++A G ++ M   G++ +  +Y+ ++    + G   EA  + + M 
Sbjct: 247 YNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMT 306

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
            RG+ P +ATY  L+ G CK GRV ++   F  M+R  V PDII+YNTL+ G C +G + 
Sbjct: 307 KRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMD 366

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           EA  L   + S  + P +VTY TLI+G CR   ++ A  L + M++ G+ P++ITY I++
Sbjct: 367 EATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIIL 426

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
            G       + A+E +  + + G Q +   Y   + G  K   T EA R+ + +      
Sbjct: 427 QGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQ 486

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
            +  T+N+++  L K G ++EA +L      +G +PD  TY+ +    +E G L    DL
Sbjct: 487 LETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDL 546

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
           F +M   G S        ++     RG +  A  Y 
Sbjct: 547 FLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYL 582



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 123/447 (27%), Positives = 207/447 (46%), Gaps = 16/447 (3%)

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG---VAPTLATY 351
           E AR +  ++L+ G   S +  N  +   +       A++    M   G   V PT+ TY
Sbjct: 37  EDARHVFDELLRRGRGASIYGLNRALADVARHSP-AAAVSRYNRMARAGAGKVTPTVHTY 95

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF-LLFDELR 410
            ILI   C+ GR+         +++K    D I++  LL G C      +A  ++   + 
Sbjct: 96  AILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMT 155

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ---GILPDVITYTIMVNGSCKMG 467
               +P V +YN L+ GLC     + A +L   M +    G  PDV++Y  ++NG  K G
Sbjct: 156 ELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEG 215

Query: 468 --------NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
                    +  A E  N M++ G+ PD   Y + + G    G   EA    ++M + G 
Sbjct: 216 IQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGV 275

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
            P+++TY+ L++ LCK G   EA ++   M   G  PD  TY +++    + G +     
Sbjct: 276 EPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEK 335

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
           LF+ M+R G+ P ++TY  LI      G+++ A    + M   G++P+++TY  LING C
Sbjct: 336 LFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYC 395

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
           R+ R+D A  LF +M   G+ PN  TY I++    +      A  LY  +     + +  
Sbjct: 396 RVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELS 455

Query: 700 THSALLLKQLDKDYKVHAVEYLESLTL 726
           T++ +L      +    A+   ++L L
Sbjct: 456 TYNIILHGLCKNNLTDEALRMFQNLCL 482


>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Brachypodium distachyon]
          Length = 524

 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 139/413 (33%), Positives = 219/413 (53%), Gaps = 41/413 (9%)

Query: 192 CLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLD 251
             ++F  + R  L       N +++ L   G  V+A E+ R M      P+ VTYNT++ 
Sbjct: 100 AFVLFADIFRLRLPLSTTTFNIMLRHLCTAGKPVRALELLRQMPS----PNAVTYNTVIA 155

Query: 252 SFCKEGEMQEALELLWEMQGRG-CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG-L 309
            FC  G +Q  +E++ EM+ RG  +P+  TY  +I+G+ + G++E A  +  +ML  G +
Sbjct: 156 GFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKV 215

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
           + +A  YN +I GY ++G L  AL    EMV RGV+ T+ATYN+ ++ L   GR ++A  
Sbjct: 216 EPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHA 275

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL- 428
              EM  K + PD  +YN L+ GYC+ G   +A  +F+ +  + +  TVVTY +LI  L 
Sbjct: 276 LVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALS 335

Query: 429 ----------------------------------CRYGDLEVAQQLKENMINQGILPDVI 454
                                             C  GD++ A ++   M  + I PD +
Sbjct: 336 MKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDV 395

Query: 455 TYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM 514
           TY  ++ G C +G L  AR    EM ++G+QPD  +Y T I+G    GD  +A ++++EM
Sbjct: 396 TYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEM 455

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
           + KGF P L+TYN ++ GLC  G   +A +L+++MVG+G  PD  TY S+I  
Sbjct: 456 MGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEG 508



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 122/358 (34%), Positives = 201/358 (56%), Gaps = 6/358 (1%)

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           T+NI++  LC  G+      R  E+LR+   P+ ++YNT++ G+C  G +     +  E+
Sbjct: 118 TFNIMLRHLCTAGKPV----RALELLRQMPSPNAVTYNTVIAGFCARGRVQAGIEIMREM 173

Query: 410 RSRN-LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG-ILPDVITYTIMVNGSCKMG 467
           R R  + P   TY T+I G C+ G +E A ++ + M+ +G + P+ + Y  ++ G C  G
Sbjct: 174 RERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQG 233

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
           NL +A  +  EM+ +G+      Y   +      G  +EA+ L EEM  KG  PD  TYN
Sbjct: 234 NLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYN 293

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
           +L++G CK G  ++A ++   MVG G     +TYTS+IHA    G ++    LFN+ +R+
Sbjct: 294 ILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRR 353

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
           G+ P L  Y  LI++H   G ++ AF    EM+ K I P+ +TYN L+ GLC L R+D+A
Sbjct: 354 GIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEA 413

Query: 648 YGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            GL  +M + GI P+  +Y  LI+     G+ ++A+++  EM+ +   P   T++A++
Sbjct: 414 RGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMI 471



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 136/399 (34%), Positives = 206/399 (51%), Gaps = 6/399 (1%)

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
           S  T+N ML   C  G+   ALELL +M     SPN VTYN +I GF   G ++    ++
Sbjct: 115 STTTFNIMLRHLCTAGKPVRALELLRQMP----SPNAVTYNTVIAGFCARGRVQAGIEIM 170

Query: 302 RDML-KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG-VAPTLATYNILIYGLC 359
           R+M  + G+    ++Y  +I G+ + G + +A  + +EM+T G V P    YN LI G C
Sbjct: 171 REMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYC 230

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
             G +  A     EM+ + V   + +YN  ++     G   EA  L +E+  + L P   
Sbjct: 231 DQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAF 290

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
           TYN LI+G C+ G  + A ++ E M+ +GI   V+TYT +++     G +      FN+ 
Sbjct: 291 TYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDA 350

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
           +R+G++PD F Y   I      GD   A+ +  EM  K   PD +TYN L+ GLC LG L
Sbjct: 351 VRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRL 410

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           +EA  L+ +M   G  PD ++Y ++I      GD++    + + M+ KG +PTL+TY  +
Sbjct: 411 DEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAM 470

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           I      G+   A     EM   GI P+  TY +LI GL
Sbjct: 471 IKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGL 509



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 136/420 (32%), Positives = 208/420 (49%), Gaps = 6/420 (1%)

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
           L  D+ +L L +S  ++N ++      G  V AL L  +M +    P   TYN +I G C
Sbjct: 103 LFADIFRLRLPLSTTTFNIMLRHLCTAGKPVRALELLRQMPS----PNAVTYNTVIAGFC 158

Query: 360 KWGRVSDARHRFFEML-RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV-PT 417
             GRV        EM  R  + PD  +Y T++ G+C+ G + +A  +FDE+ +   V P 
Sbjct: 159 ARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPN 218

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
            V YN LI G C  G+LEVA + +  M+++G+   V TY + V+     G  + A     
Sbjct: 219 AVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVE 278

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           EM  KGL PD F Y   I G  K G   +A ++ E M+ KG    ++TY  L+H L   G
Sbjct: 279 EMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKG 338

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            ++E + L    V  G  PD   Y ++I++    GD+ R  ++   M +K ++P  VTY 
Sbjct: 339 MVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYN 398

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
            L+      GRL+ A     EM  +GI+P++++YN LI+G      I  A  +  +M  +
Sbjct: 399 TLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGK 458

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHA 717
           G  P   TY  +I   C  G   +A  L KEM+   I PD  T+ +L+     +D ++ A
Sbjct: 459 GFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGLTTEDERLAA 518



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 109/334 (32%), Positives = 173/334 (51%), Gaps = 1/334 (0%)

Query: 201 RNGLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMGEFGIKPSIVTYNTMLDSFCKEGEM 259
           R G+ PD      +I      G    A +V+  M+ E  ++P+ V YN ++  +C +G +
Sbjct: 176 RGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNL 235

Query: 260 QEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI 319
           + AL    EM  RG S    TYN+ +      G   +A  L+ +M + GL   A +YN +
Sbjct: 236 EVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNIL 295

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           I GY ++G   +A+ + E MV +G+  T+ TY  LI+ L   G V +    F + +R+ +
Sbjct: 296 INGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGI 355

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
            PD+  YN L+  +C  G++  AF +  E+  + + P  VTYNTL+ GLC  G L+ A+ 
Sbjct: 356 RPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARG 415

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           L E M  +GI PD+++Y  +++G    G++  A +  +EM+ KG  P    Y   I G  
Sbjct: 416 LIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLC 475

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
             G   +A  L +EM+  G  PD  TY  L+ GL
Sbjct: 476 LNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGL 509



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 180/366 (49%), Gaps = 21/366 (5%)

Query: 101 REKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVC---VNMHG 157
           R + +  +   R +  + G+  D++ + T++    + G +  A  V + ++    V  + 
Sbjct: 160 RGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNA 219

Query: 158 IL-DVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIK 216
           ++ + LIGG                 Y  +  +E  L    +M+  G+   V   N  + 
Sbjct: 220 VMYNALIGG-----------------YCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVH 262

Query: 217 VLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSP 276
            L   G + +A  +   MGE G+ P   TYN +++ +CKEG+ ++A+++   M G+G   
Sbjct: 263 TLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRA 322

Query: 277 NGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLE 336
             VTY  LI   S  G +++   L  D ++ G++     YN +I  +   G +  A  + 
Sbjct: 323 TVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIM 382

Query: 337 EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS 396
            EM  + + P   TYN L+ GLC  GR+ +AR    EM ++ + PD++SYNTL+ GY   
Sbjct: 383 GEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMK 442

Query: 397 GNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
           G+I +A  + DE+  +   PT++TYN +I GLC  G    A+ L + M+  GI PD  TY
Sbjct: 443 GDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTY 502

Query: 457 TIMVNG 462
             ++ G
Sbjct: 503 ISLIEG 508



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 168/341 (49%), Gaps = 41/341 (12%)

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           AF+LF ++    L  +  T+N ++  LC  G    A +L   M +    P+ +TY  ++ 
Sbjct: 100 AFVLFADIFRLRLPLSTTTFNIMLRHLCTAGKPVRALELLRQMPS----PNAVTYNTVIA 155

Query: 462 GSCKMGNLSMAREFFNEML-RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG-F 519
           G C  G +    E   EM  R G+ PD++ Y T I+G  K+G   +A ++ +EML +G  
Sbjct: 156 GFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKV 215

Query: 520 PPDLITYNVLVHGLCKLGSLE-----------------------------------EANE 544
            P+ + YN L+ G C  G+LE                                   EA+ 
Sbjct: 216 EPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHA 275

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           L+ +M   G  PD  TY  +I+   + G  ++   +F  M+ KG+  T+VTYT LIHA +
Sbjct: 276 LVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALS 335

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
            +G ++     F++   +GIRP++  YNALIN  C    +D+A+ +  +ME++ I P+  
Sbjct: 336 MKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDV 395

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           TY  L+   C  G   EA  L +EM  R I+PD  +++ L+
Sbjct: 396 TYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLI 436



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 6/102 (5%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGF---SVKAREVYRMMGEFGIKPSIVTYNTMLD 251
           +  +M + G+ PD+ + N +I      G    +VK R+   MMG+ G  P+++TYN M+ 
Sbjct: 416 LIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRD--EMMGK-GFNPTLLTYNAMIK 472

Query: 252 SFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
             C  G+  +A +L+ EM G G +P+  TY  LI G +   E
Sbjct: 473 GLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGLTTEDE 514


>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
          Length = 637

 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 138/500 (27%), Positives = 240/500 (48%), Gaps = 5/500 (1%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P V+  N ++  L           VY  M + G+ P++ TYN ++ + C+   +  A ++
Sbjct: 120 PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKM 179

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           L EM  +GC P+ V++  +++G  + G +E+ARG + + + +       SYN ++     
Sbjct: 180 LDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPV-----QASYNAVVHALCG 234

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
           +  + E  ++  EMV RG+ P + TY  ++   CK   +  A      M+     P++++
Sbjct: 235 EFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLT 294

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           +  L+ G+   G + +A  ++  +      P+ ++YN LI GLC  GDL+ A     +M 
Sbjct: 295 FTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMK 354

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
              +LP+  TY+ +V+G    G+L  A   +NEM   G +P+   YT  I    K     
Sbjct: 355 RNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFD 414

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           +A  L ++ML    PP+ +T+N L+  LC  G +  A  +   M  +G  P+  TY  ++
Sbjct: 415 QAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELL 474

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
           H     G+ +    +   ML  G   +LVTY  +I+        + A +    M V+GI+
Sbjct: 475 HGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQ 534

Query: 626 PNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRL 685
           P+  T+NA+I+  C+  ++  A  L   M       N   YTILI+E CN G    A+  
Sbjct: 535 PDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVY 594

Query: 686 YKEMLDREIEPDYCTHSALL 705
             +ML   I P+  T + L+
Sbjct: 595 LLKMLYEGICPNEATWNVLV 614



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 142/496 (28%), Positives = 244/496 (49%), Gaps = 30/496 (6%)

Query: 173 IKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR 232
           +++ + LL    +++MV   + V++ M + G+ P+V   N +I+ L  N     AR++  
Sbjct: 122 VRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLD 181

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELL-----------------------WE- 268
            M   G  P  V++ T++   CK G ++EA   L                       WE 
Sbjct: 182 EMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRMWEV 241

Query: 269 ------MQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
                 M  RG  PN VTY  ++  F +  EL  A  ++  M+ +G   +  ++  ++ G
Sbjct: 242 FSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKG 301

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
           + E G + +AL++   MV  G AP+  +YN+LI GLC  G +  A   F  M R  ++P+
Sbjct: 302 FFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPN 361

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
             +Y+TL+ G+  +G++  A L+++E++S    P VV Y  +ID LC+    + A+ L +
Sbjct: 362 ATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLID 421

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            M+     P+ +T+  ++   C  G +  A   F+ M R G  P+   Y   + G  + G
Sbjct: 422 KMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREG 481

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
           +  +A+ +  EML  GF   L+TYN +++ LC++   + A  LL +M+  G  PD  T+ 
Sbjct: 482 NHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFN 541

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
           +IIHA  + G +     L   M        +V YT+LI     +G+L  A +Y  +M  +
Sbjct: 542 AIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYE 601

Query: 623 GIRPNVITYNALINGL 638
           GI PN  T+N L+  +
Sbjct: 602 GICPNEATWNVLVRAI 617



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 129/469 (27%), Positives = 231/469 (49%), Gaps = 6/469 (1%)

Query: 222 GFSVKAREVYRMMGEFGIK-PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVT 280
           G + +A + +    + G + P +  YN +LD+  +E  +   + +   M+  G  PN  T
Sbjct: 100 GSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYT 159

Query: 281 YNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV 340
           YN+LI    +N  ++ AR ++ +M + G      S+  I+ G  + G + EA     E V
Sbjct: 160 YNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETV 219

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
                P  A+YN +++ LC   R+ +      EM+++ + P++++Y T++  +C++  + 
Sbjct: 220 -----PVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELR 274

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
            A  +   + S    P V+T+  L+ G    G +  A  +   M+++G  P  I+Y +++
Sbjct: 275 MACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLI 334

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
            G C +G+L  A +FFN M R  L P+   Y+T + G    GD   A  +  EM + G  
Sbjct: 335 RGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCK 394

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           P+++ Y  ++  LCK    ++A  L+ KM+ D   P+ +T+ ++I    + G + R  ++
Sbjct: 395 PNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNV 454

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
           F+ M R G  P   TY  L+H     G  + AF    EM   G   +++TYN +IN LC+
Sbjct: 455 FHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQ 514

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           +     A  L   M  +GI P+ +T+  +I+  C  G    A  L  +M
Sbjct: 515 MCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQM 563



 Score = 47.0 bits (110), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 45/104 (43%)

Query: 188 MVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
           M +  +L+  +M+  G+ PD    N II      G    A  +   M       ++V Y 
Sbjct: 517 MRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYT 576

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
            ++   C +G++  A+  L +M   G  PN  T+NVL+     N
Sbjct: 577 ILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTN 620


>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 733

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 161/609 (26%), Positives = 281/609 (46%), Gaps = 18/609 (2%)

Query: 90  PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVET 149
           P  +  VL +++   R+ALRFF W + Q   + D  V+  +LEIL ++ L + A  V+  
Sbjct: 101 PRQVCAVL-QLQTDERVALRFFYWADRQWRYRHDPIVYYAMLEILSKTKLCQGAKRVLRL 159

Query: 150 VVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVK 209
           +    +                  +    +++ Y++   +   + V   M + G+ PD+ 
Sbjct: 160 MAKRRIER--------------RPEAFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLS 205

Query: 210 NCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM 269
            CN  I VL       KA      M    I+P+++TYN ++  +C    +++A+EL+ EM
Sbjct: 206 ICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEM 265

Query: 270 QGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK-LGLKVSAHSYNPIICGYSEKGL 328
             +GCSP+ ++Y  ++    +   +++ R L+  MLK   L     +YN  +   S+ G 
Sbjct: 266 PFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGH 325

Query: 329 LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNT 388
             EAL    E   R        Y+ +++  C+ GR+  A+    EM  K  IPD+++Y +
Sbjct: 326 GDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTS 385

Query: 389 LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
           ++ G C+   + +A  +  ++      P  V+Y  L++GLC+ G+   A+++        
Sbjct: 386 VINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDW 445

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
            +P+ ITY+++++G  + G  S A +   EM++KG  P        I    +     EA 
Sbjct: 446 WIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAK 505

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
           R  E+ L  G   +++ +  ++HG C+   LE A  LL  M      PD +TYT+II A 
Sbjct: 506 RFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDAL 565

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
            + G +     L   MLR GL PT VTY  +IH +   GR+E       +M  +  +   
Sbjct: 566 GKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSR--QECR 623

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
             YN +I  LC    ++QAY L   +       +  T  +LI    + G    +  +   
Sbjct: 624 TAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACR 683

Query: 689 MLDREIEPD 697
           M +R + PD
Sbjct: 684 MFNRNLIPD 692



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/413 (30%), Positives = 207/413 (50%), Gaps = 9/413 (2%)

Query: 185 KKSMVEQCLLVFNKMLRNG-LLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
           K+  +++  L+  KML++  LLPD    N  + +L  +G   +A E  R   E   +   
Sbjct: 286 KEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDK 345

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           V Y+ ++ SFC+EG M +A E++ EM  +GC P+ VTY  +I G  +  +++QA+ ++R 
Sbjct: 346 VGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQ 405

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEA---LNLEEEMVTRGVAPTLATYNILIYGLCK 360
           M K G K +  SY  ++ G  + G  +EA   +N+ EE       P   TY++L++G  +
Sbjct: 406 MYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEE---DWWIPNAITYSVLMHGFRR 462

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G+ S+A     EM++K   P  +  N L+   C+   + EA    ++  +      VV 
Sbjct: 463 EGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVN 522

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           + T+I G C+  DLE A  L ++M      PDV+TYT +++   K G +  A +   +ML
Sbjct: 523 FTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKML 582

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           R GL P    Y T I    ++G   +  +L E+ML++        YN ++  LC  G+LE
Sbjct: 583 RVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSR--QECRTAYNQVIEKLCSFGNLE 640

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
           +A +LL K++      D  T   +I + L  G      ++   M  + L P L
Sbjct: 641 QAYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDL 693



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 175/373 (46%), Gaps = 2/373 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + ++  +++   + N+M   G +PDV     +I  L       +A+++ R M + G KP+
Sbjct: 355 FCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPN 414

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            V+Y  +L+  CK G   EA E++   +     PN +TY+VL+ GF R G+  +A  L+R
Sbjct: 415 TVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVR 474

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M+K G   +    N +I    ++  + EA    E+ +  G A  +  +  +I+G C+  
Sbjct: 475 EMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKD 534

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            +  A     +M   N  PD+++Y T++    + G I EA  L  ++    L+PT VTY 
Sbjct: 535 DLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYR 594

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           T+I   CR G +E   +L E M+++        Y  ++   C  GNL  A +   ++LR 
Sbjct: 595 TVIHQYCRMGRVEDLLKLLEKMLSRQECR--TAYNQVIEKLCSFGNLEQAYKLLGKVLRT 652

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
             + D       I   L  G    +Y +   M  +   PDL     +   L   G  EEA
Sbjct: 653 ASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEA 712

Query: 543 NELLRKMVGDGFI 555
           ++L+ + V  G I
Sbjct: 713 DKLILRFVERGRI 725


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 128/421 (30%), Positives = 225/421 (53%), Gaps = 3/421 (0%)

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           P+ V ++ +++  +++   +    L   M   G+    +SYN +I         V AL++
Sbjct: 8   PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
             +M+  G  P + T + LI G C+  RV DA     +M      PD++ YNT++ G C+
Sbjct: 68  VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127

Query: 396 SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
            G + +A  LFD +    +    VTYN+L+ GLC  G    A +L  +M+ + I+P+VIT
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 187

Query: 456 YTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML 515
           +T +++   K G  S A + + EM R+ + PD F Y + I G    G   EA ++ + M+
Sbjct: 188 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 247

Query: 516 AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLR 575
            KG  PD++TYN L++G CK   ++E  +L R+M   G + D ITY +II    + G   
Sbjct: 248 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 307

Query: 576 RGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALI 635
             +++F+ M  +   P + TY++L++      R+E A + F  MQ   I  ++ TYN +I
Sbjct: 308 AAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 364

Query: 636 NGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIE 695
           +G+C++  ++ A+ LF  +  +G+ P+  +YT +I+  C    W ++  LY++M +  + 
Sbjct: 365 HGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 424

Query: 696 P 696
           P
Sbjct: 425 P 425



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 128/429 (29%), Positives = 231/429 (53%), Gaps = 5/429 (1%)

Query: 199 MLRNGLLPDVKNCNRII-KVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG 257
           M+++  LP + + ++++ K+ +   + +    ++  M   GI   + +YN +++  C+  
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDL-VISLFHHMEVCGIGHDLYSYNIVINCLCRCS 59

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
               AL ++ +M   G  P+ VT + LI GF +   +  A  L+  M ++G +     YN
Sbjct: 60  RFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYN 119

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            II G  + GL+ +A+ L + M   GV     TYN L+ GLC  GR SDA     +M+ +
Sbjct: 120 TIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR 179

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
           +++P++I++  ++  + + G   EA  L++E+  R + P V TYN+LI+GLC +G ++ A
Sbjct: 180 DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEA 239

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
           +Q+ + M+ +G LPDV+TY  ++NG CK   +    + F EM ++GL  D   Y T I G
Sbjct: 240 KQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQG 299

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
             + G    A  +   M ++   P++ TY++L++GLC    +E+A  L   M       D
Sbjct: 300 YFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELD 356

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
             TY  +IH   ++G++    DLF ++  KGL P +V+YT +I     + + + + + + 
Sbjct: 357 ITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYR 416

Query: 618 EMQVKGIRP 626
           +MQ  G+ P
Sbjct: 417 KMQEDGLLP 425



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 121/364 (33%), Positives = 195/364 (53%), Gaps = 3/364 (0%)

Query: 193 LLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDS 252
           L V  KM++ G  PDV   + +I           A ++   M E G +P +V YNT++D 
Sbjct: 65  LSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDG 124

Query: 253 FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVS 312
            CK G + +A+EL   M+  G   + VTYN L+ G   +G    A  L+RDM+   +  +
Sbjct: 125 SCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPN 184

Query: 313 AHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
             ++  +I  + ++G   EA+ L EEM  R V P + TYN LI GLC  GRV +A+    
Sbjct: 185 VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLD 244

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
            M+ K  +PD+++YNTL+ G+C+S  + E   LF E+  R LV   +TYNT+I G  + G
Sbjct: 245 LMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAG 304

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
             + AQ++   M ++   P++ TY+I++ G C    +  A   F  M +  ++ D   Y 
Sbjct: 305 RPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYN 361

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
             I G  K+G+  +A+ L   +  KG  PD+++Y  ++ G C+    ++++ L RKM  D
Sbjct: 362 IVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQED 421

Query: 553 GFIP 556
           G +P
Sbjct: 422 GLLP 425



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 119/374 (31%), Positives = 202/374 (54%), Gaps = 3/374 (0%)

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
            ++L   M   G+   L +YNI+I  LC+  R   A     +M++    PD+++ ++L+ 
Sbjct: 29  VISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLIN 88

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
           G+C+   + +A  L  ++      P VV YNT+IDG C+ G +  A +L + M   G+  
Sbjct: 89  GFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRA 148

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           D +TY  +V G C  G  S A     +M+ + + P+   +T  I   +K G  SEA +L 
Sbjct: 149 DAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLY 208

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
           EEM  +   PD+ TYN L++GLC  G ++EA ++L  MV  G +PD +TY ++I+   + 
Sbjct: 209 EEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKS 268

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
             +  G  LF  M ++GL    +TY  +I  +   GR + A   FS M     RPN+ TY
Sbjct: 269 KRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTY 325

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           + L+ GLC   R+++A  LF +M++  I  +  TY I+I+  C  GN ++A  L++ +  
Sbjct: 326 SILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSC 385

Query: 692 REIEPDYCTHSALL 705
           + ++PD  +++ ++
Sbjct: 386 KGLKPDVVSYTTMI 399



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 121/398 (30%), Positives = 211/398 (53%), Gaps = 5/398 (1%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVL-RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
           +F+ M   G+  D+ + N +I  L R + F +    V +MM +FG +P +VT +++++ F
Sbjct: 32  LFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM-KFGYEPDVVTVSSLINGF 90

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           C+   + +A++L+ +M+  G  P+ V YN +I G  + G +  A  L   M + G++  A
Sbjct: 91  CQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADA 150

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
            +YN ++ G    G   +A  L  +MV R + P + T+  +I    K G+ S+A   + E
Sbjct: 151 VTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEE 210

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M R+ V PD+ +YN+L+ G C  G + EA  + D + ++  +P VVTYNTLI+G C+   
Sbjct: 211 MTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKR 270

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           ++   +L   M  +G++ D ITY  ++ G  + G    A+E F+ M  +   P+   Y+ 
Sbjct: 271 VDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSI 327

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            + G        +A  L E M       D+ TYN+++HG+CK+G++E+A +L R +   G
Sbjct: 328 LLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKG 387

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
             PD ++YT++I          +   L+  M   GL P
Sbjct: 388 LKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/332 (31%), Positives = 167/332 (50%), Gaps = 3/332 (0%)

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M++   +P I+ ++ +L    +S N      LF  +    +   + +YN +I+ LCR   
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
             +A  +   M+  G  PDV+T + ++NG C+   +  A +  ++M   G +PD   Y T
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            I G  K+G  ++A  L + M   G   D +TYN LV GLC  G   +A  L+R MV   
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
            +P+ IT+T++I   ++ G       L+  M R+ + P + TY  LI+     GR++ A 
Sbjct: 181 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 240

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
                M  KG  P+V+TYN LING C+ +R+D+   LF +M + G++ +  TY  +I   
Sbjct: 241 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 300

Query: 674 CNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             AG    A  ++  M  R   P+  T+S LL
Sbjct: 301 FQAGRPDAAQEIFSRMDSR---PNIRTYSILL 329



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 127/235 (54%), Gaps = 3/235 (1%)

Query: 182 IYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKP 241
           ++ K+    + + ++ +M R  + PDV   N +I  L  +G   +A+++  +M   G  P
Sbjct: 194 VFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLP 253

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
            +VTYNT+++ FCK   + E  +L  EM  RG   + +TYN +I G+ + G  + A+ + 
Sbjct: 254 DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIF 313

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
               ++  + +  +Y+ ++ G      + +AL L E M    +   + TYNI+I+G+CK 
Sbjct: 314 S---RMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKI 370

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           G V DA   F  +  K + PD++SY T++ G+CR     ++ LL+ +++   L+P
Sbjct: 371 GNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425


>gi|297808491|ref|XP_002872129.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297317966|gb|EFH48388.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 588

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 144/418 (34%), Positives = 223/418 (53%), Gaps = 4/418 (0%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G  P ++ +N +L+  CK G +++A  L+ EM+  G SPN V+YN LI G      +++A
Sbjct: 149 GFIPGLIMHNHLLNGLCKLGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKA 208

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN--LEEEMVTRGV-AP-TLATYNI 353
             L   + K G+K +  + N I+    +KG++       LEE + +  V AP  + T  I
Sbjct: 209 LYLFSTLNKYGIKPNRVTCNIIVHALCQKGVIGNNNTKLLEEILDSSQVNAPLDIVTCTI 268

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           L+    K G V  A   + EM +KNV  D + YN ++ G C SGN+  A+    ++  R 
Sbjct: 269 LMDSCFKNGNVVQALEVWKEMSQKNVPTDSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRG 328

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           + P V TYNTLI  LC+ G  +VA  L   M N G+ PD I+Y +++ G C  G++  A 
Sbjct: 329 VNPDVFTYNTLISALCKAGKFDVACDLHGTMQNVGVAPDQISYKVIIQGLCIQGDVDRAN 388

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
           EF   ML++ L P+   +   I G  + GDTS A  +   ML+ G  P++ T N L+HG 
Sbjct: 389 EFLQSMLKRSLLPEVLLWNVVIDGYGRYGDTSCALSVLNLMLSYGVKPNVYTNNALIHGY 448

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
            K G L +A  +  +M      PD  TY  ++ A+  +G LR    L++ ML++G  P +
Sbjct: 449 VKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLVGAACTLGHLRLAFQLYDEMLKRGCQPDI 508

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
           +TYT L+     +GRL+ A    S MQV GI  + + +  L+    RL+R D+AY ++
Sbjct: 509 ITYTELVRGLCWKGRLKEAESLLSRMQVSGITMDHVPFLILVKKYTRLQRPDEAYLVY 566



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 133/467 (28%), Positives = 229/467 (49%), Gaps = 4/467 (0%)

Query: 228 REVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITG 287
           RE       F    S+  +++++   C +G+M  AL L  +M   G  P  + +N L+ G
Sbjct: 104 RESVCQTKNFEYDDSLSIHSSIMRDLCLQGKMDAALWLREKMLRSGFIPGLIMHNHLLNG 163

Query: 288 FSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPT 347
             + G +E+A GL+R+M ++G   +  SYN +I G      + +AL L   +   G+ P 
Sbjct: 164 LCKLGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFSTLNKYGIKPN 223

Query: 348 LATYNILIYGLCKWGRVSDARHRFFEML----RKNVIPDIISYNTLLYGYCRSGNIGEAF 403
             T NI+++ LC+ G + +   +  E +    + N   DI++   L+    ++GN+ +A 
Sbjct: 224 RVTCNIIVHALCQKGVIGNNNTKLLEEILDSSQVNAPLDIVTCTILMDSCFKNGNVVQAL 283

Query: 404 LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
            ++ E+  +N+    V YN +I GLC  G++  A     +M+ +G+ PDV TY  +++  
Sbjct: 284 EVWKEMSQKNVPTDSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISAL 343

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
           CK G   +A +    M   G+ PD+ +Y   I G    GD   A    + ML +   P++
Sbjct: 344 CKAGKFDVACDLHGTMQNVGVAPDQISYKVIIQGLCIQGDVDRANEFLQSMLKRSLLPEV 403

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
           + +NV++ G  + G    A  +L  M+  G  P+  T  ++IH  ++ G L     + N 
Sbjct: 404 LLWNVVIDGYGRYGDTSCALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNE 463

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           M    + P   TY +L+ A    G L LAF  + EM  +G +P++ITY  L+ GLC   R
Sbjct: 464 MRSTKIHPDTTTYNLLVGAACTLGHLRLAFQLYDEMLKRGCQPDIITYTELVRGLCWKGR 523

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           + +A  L   M+  GI  +   + IL+ +        EA  +YK+ L
Sbjct: 524 LKEAESLLSRMQVSGITMDHVPFLILVKKYTRLQRPDEAYLVYKKWL 570



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 142/515 (27%), Positives = 252/515 (48%), Gaps = 18/515 (3%)

Query: 112 RWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCV 171
           +W   Q   KRD      +L+ +++S L R A   +   VC   +   D      LS   
Sbjct: 70  KWFSDQKDQKRDPEAIFNVLDYILKSSLDRLAS--LRESVCQTKNFEYD----DSLSIHS 123

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           SI + DL L     +  ++  L +  KMLR+G +P +   N ++  L   G+  KA  + 
Sbjct: 124 SI-MRDLCL-----QGKMDAALWLREKMLRSGFIPGLIMHNHLLNGLCKLGYIEKADGLV 177

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
           R M E G  P+ V+YNT++   C    + +AL L   +   G  PN VT N+++    + 
Sbjct: 178 REMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFSTLNKYGIKPNRVTCNIIVHALCQK 237

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIIC-----GYSEKGLLVEALNLEEEMVTRGVAP 346
           G +      + + +    +V+A   + + C        + G +V+AL + +EM  + V  
Sbjct: 238 GVIGNNNTKLLEEILDSSQVNA-PLDIVTCTILMDSCFKNGNVVQALEVWKEMSQKNVPT 296

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
               YN++I GLC  G +  A     +M+++ V PD+ +YNTL+   C++G    A  L 
Sbjct: 297 DSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKAGKFDVACDLH 356

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
             +++  + P  ++Y  +I GLC  GD++ A +  ++M+ + +LP+V+ + ++++G  + 
Sbjct: 357 GTMQNVGVAPDQISYKVIIQGLCIQGDVDRANEFLQSMLKRSLLPEVLLWNVVIDGYGRY 416

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G+ S A    N ML  G++P+ +     I G +K G   +A+ ++ EM +    PD  TY
Sbjct: 417 GDTSCALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTY 476

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           N+LV   C LG L  A +L  +M+  G  PD ITYT ++      G L+    L + M  
Sbjct: 477 NLLVGAACTLGHLRLAFQLYDEMLKRGCQPDIITYTELVRGLCWKGRLKEAESLLSRMQV 536

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
            G++   V + +L+  +    R + A++ + +  V
Sbjct: 537 SGITMDHVPFLILVKKYTRLQRPDEAYLVYKKWLV 571



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 121/411 (29%), Positives = 198/411 (48%), Gaps = 4/411 (0%)

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G+++ A  L   ML+ G       +N ++ G  + G + +A  L  EM   G +P   +Y
Sbjct: 133 GKMDAALWLREKMLRSGFIPGLIMHNHLLNGLCKLGYIEKADGLVREMREMGPSPNCVSY 192

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL-LFDELR 410
           N LI GLC    V  A + F  + +  + P+ ++ N +++  C+ G IG     L +E+ 
Sbjct: 193 NTLIKGLCSVNNVDKALYLFSTLNKYGIKPNRVTCNIIVHALCQKGVIGNNNTKLLEEIL 252

Query: 411 SRNLVPT---VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMG 467
             + V     +VT   L+D   + G++  A ++ + M  + +  D + Y +++ G C  G
Sbjct: 253 DSSQVNAPLDIVTCTILMDSCFKNGNVVQALEVWKEMSQKNVPTDSVVYNVIIRGLCSSG 312

Query: 468 NLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYN 527
           N+  A  F  +M+++G+ PD F Y T I+   K G    A  L   M   G  PD I+Y 
Sbjct: 313 NMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKAGKFDVACDLHGTMQNVGVAPDQISYK 372

Query: 528 VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
           V++ GLC  G ++ ANE L+ M+    +P+ + +  +I      GD      + N ML  
Sbjct: 373 VIIQGLCIQGDVDRANEFLQSMLKRSLLPEVLLWNVVIDGYGRYGDTSCALSVLNLMLSY 432

Query: 588 GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
           G+ P + T   LIH +   GRL  A+   +EM+   I P+  TYN L+   C L  +  A
Sbjct: 433 GVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLVGAACTLGHLRLA 492

Query: 648 YGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
           + L+ +M + G  P+  TYT L+   C  G  +EA  L   M    I  D+
Sbjct: 493 FQLYDEMLKRGCQPDIITYTELVRGLCWKGRLKEAESLLSRMQVSGITMDH 543



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 58/109 (53%)

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
           +L  ++ ++     +G+++ A     +M   G  P +I +N L+NGLC+L  I++A GL 
Sbjct: 118 SLSIHSSIMRDLCLQGKMDAALWLREKMLRSGFIPGLIMHNHLLNGLCKLGYIEKADGLV 177

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
            +M E G  PN  +Y  LI   C+  N  +AL L+  +    I+P+  T
Sbjct: 178 REMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFSTLNKYGIKPNRVT 226


>gi|334186712|ref|NP_001190774.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
 gi|223635614|sp|P0C8Q3.1|PP326_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g19890
 gi|332658842|gb|AEE84242.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
          Length = 701

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 147/477 (30%), Positives = 237/477 (49%), Gaps = 1/477 (0%)

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           ML +F + G + EA+ ++ +MQ +G +P+ +T N ++      G +E A  +  +M   G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           +   + SY  ++ G    G + EA      M+ RG  P  AT  +++  LC+ G V+ A 
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F +M+     P++I++ +L+ G C+ G+I +AF + +E+      P V T+  LIDGL
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332

Query: 429 CRYGDLEVAQQLKENMINQGIL-PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           C+ G  E A +L   ++      P+V TYT M+ G CK   L+ A   F+ M  +GL P+
Sbjct: 333 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 392

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              YTT I G  K G    AY L   M  +GF P++ TYN  +  LCK     EA ELL 
Sbjct: 393 VNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLN 452

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
           K    G   D +TYT +I    +  D+ +    F  M + G    +    +LI A   + 
Sbjct: 453 KAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQK 512

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
           +++ +   F  +   G+ P   TY ++I+  C+   ID A   F +M+  G +P+ +TY 
Sbjct: 513 KMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYG 572

Query: 668 ILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
            LI+  C      EA +LY+ M+DR + P   T   L  +   ++   +A+  LE L
Sbjct: 573 SLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPL 629



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 143/462 (30%), Positives = 226/462 (48%), Gaps = 2/462 (0%)

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M   G+ PS +T N +L+   + G ++ A  +  EM  RG  P+  +Y +++ G  R+G+
Sbjct: 173 MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGK 232

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           +++A   +  M++ G      +   I+    E GL+  A+    +M+  G  P L  +  
Sbjct: 233 IQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTS 292

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL-RSR 412
           LI GLCK G +  A     EM+R    P++ ++  L+ G C+ G   +AF LF +L RS 
Sbjct: 293 LIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD 352

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
              P V TY ++I G C+   L  A+ L   M  QG+ P+V TYT ++NG CK G+   A
Sbjct: 353 TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRA 412

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
            E  N M  +G  P+ + Y   I    K     EAY L  +  + G   D +TY +L+  
Sbjct: 413 YELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQE 472

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
            CK   + +A     +M   GF  D      +I A      ++    LF  ++  GL PT
Sbjct: 473 QCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPT 532

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
             TYT +I  +   G ++LA  YF  M+  G  P+  TY +LI+GLC+   +D+A  L+ 
Sbjct: 533 KETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYE 592

Query: 653 DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
            M + G+ P + T   L  E C   +   A+ L  E LD+++
Sbjct: 593 AMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILL-EPLDKKL 633



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 143/507 (28%), Positives = 240/507 (47%), Gaps = 4/507 (0%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           M   GL P     N ++++  + G    A  V+  M   G+ P   +Y  M+    ++G+
Sbjct: 173 MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGK 232

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           +QEA   L  M  RG  P+  T  +++T    NG + +A    R M+ LG K +  ++  
Sbjct: 233 IQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTS 292

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           +I G  +KG + +A  + EEMV  G  P + T+  LI GLCK G    A   F +++R +
Sbjct: 293 LIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD 352

Query: 379 VI-PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
              P++ +Y +++ GYC+   +  A +LF  ++ + L P V TY TLI+G C+ G    A
Sbjct: 353 TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRA 412

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
            +L   M ++G +P++ TY   ++  CK      A E  N+    GL+ D   YT  I  
Sbjct: 413 YELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQE 472

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
           + K  D ++A      M   GF  D+   N+L+   C+   ++E+  L + +V  G IP 
Sbjct: 473 QCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPT 532

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
             TYTS+I    + GD+      F+NM R G  P   TY  LI     +  ++ A   + 
Sbjct: 533 KETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYE 592

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
            M  +G+ P  +T   L    C  +R D A  + +    +  L  + T   L+ + C+  
Sbjct: 593 AMIDRGLSPPEVTRVTLAYEYC--KRNDSANAMILLEPLDKKLWIR-TVRTLVRKLCSEK 649

Query: 678 NWQEALRLYKEMLDREIEPDYCTHSAL 704
               A   ++++L+++   D  T +A 
Sbjct: 650 KVGVAALFFQKLLEKDSSADRVTLAAF 676



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 206/464 (44%), Gaps = 20/464 (4%)

Query: 112 RWVE--TQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSS 169
           RW+    Q G   D      IL  L E+GL+  A W    ++        D+     L +
Sbjct: 238 RWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMI--------DLGFKPNLIN 289

Query: 170 CVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE 229
             S  ++D L     KK  ++Q   +  +M+RNG  P+V     +I  L   G++ KA  
Sbjct: 290 FTS--LIDGL----CKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFR 343

Query: 230 VY-RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
           ++ +++     KP++ TY +M+  +CKE ++  A  L   M+ +G  PN  TY  LI G 
Sbjct: 344 LFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGH 403

Query: 289 SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
            + G   +A  L+  M   G   + ++YN  I    +K    EA  L  +  + G+    
Sbjct: 404 CKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADG 463

Query: 349 ATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDE 408
            TY ILI   CK   ++ A   F  M +     D+   N L+  +CR   + E+  LF  
Sbjct: 464 VTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQL 523

Query: 409 LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
           + S  L+PT  TY ++I   C+ GD+++A +   NM   G +PD  TY  +++G CK   
Sbjct: 524 VVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSM 583

Query: 469 LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
           +  A + +  M+ +GL P      T      K  D++ A  L E +  K +   + T   
Sbjct: 584 VDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLW---IRTVRT 640

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           LV  LC    +  A    +K++      D +T  +   A  E G
Sbjct: 641 LVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESG 684


>gi|10140738|gb|AAG13570.1|AC037425_1 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 811

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 164/553 (29%), Positives = 278/553 (50%), Gaps = 7/553 (1%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           + D L   Y +  MV   L V +KM    +   V   + ++  LR    +  A E++  M
Sbjct: 153 VWDALANSYARAQMVHDALYVLSKMSSLNMQISVFTYDSLLHGLR---MTDVALELFEEM 209

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG-CSPNGVTYNVLITGFSRNGE 293
              G+ PS  +++ +++  CK+ ++ EAL  L E +  G   P G+T+N+L++     G 
Sbjct: 210 ESCGVSPSEYSHSIIINGLCKQDKVGEALSFLQEARKEGKFKPLGMTFNILMSALCNWGF 269

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           ++ A+  +  MLK GL    ++++ +I G  + G + EAL+L E +   G+   + TYN 
Sbjct: 270 VQSAKSFLCLMLKYGLVPDRYTFSTLIHGLCKVGSMEEALDLFERVTKEGMELEIVTYNS 329

Query: 354 LIYGLCKWGRVSDARHRFFEMLR-KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
           LI G    G   +   +  +M+R + V PD+++Y  L+ G+C SG++ E   +  ++  +
Sbjct: 330 LINGYRLLGLTKEI-PKIIQMMRGQGVEPDLVTYTILIAGHCESGDVEEGMKVRKDVLDQ 388

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
            L   +VTY+ L++ L + G       L   + N G+  DVI Y+I+++G CK+G +  A
Sbjct: 389 GLQLNIVTYSVLLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKA 448

Query: 473 REFFNEMLR-KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
            +  N M   + + P    + + + G  K G   EA    E +  K  P D++ YNV++ 
Sbjct: 449 LQVCNAMCSSQRVMPTSLNHFSILLGLCKKGLLVEARWYLENVARKYQPTDVVFYNVVID 508

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSP 591
           G  KLG +  A  L  ++   G  P  +T  S+++   ++GDL+     F  +   GL P
Sbjct: 509 GYAKLGDIVNAVRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYFRAIQLSGLLP 568

Query: 592 TLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
           T VTYT L+ A +  G +      F EM  K I+ N +TY+ ++ GLC+  R D+A  + 
Sbjct: 569 TAVTYTTLMDALSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCKQLRFDEAINVL 628

Query: 652 IDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDK 711
            DM+ +GI  +  TY  LI   C + N Q A  ++  ML R + P   T++ L+     K
Sbjct: 629 KDMDSKGINADPITYNTLIQGFCESENVQMAFHIHDIMLCRGLVPTPVTYNLLINVLCLK 688

Query: 712 DYKVHAVEYLESL 724
              + A   LESL
Sbjct: 689 GKVIQAEILLESL 701



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 140/513 (27%), Positives = 252/513 (49%), Gaps = 44/513 (8%)

Query: 257 GEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSY 316
           G      ++LW  + R C  NG  ++ L   ++R   +  A  ++  M  L +++S  +Y
Sbjct: 131 GSAAALCDILWN-RFRECDSNGCVWDALANSYARAQMVHDALYVLSKMSSLNMQISVFTY 189

Query: 317 NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK---------------- 360
           + ++ G     +   AL L EEM + GV+P+  +++I+I GLCK                
Sbjct: 190 DSLLHGLRMTDV---ALELFEEMESCGVSPSEYSHSIIINGLCKQDKVGEALSFLQEARK 246

Query: 361 --------------------WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
                               WG V  A+     ML+  ++PD  +++TL++G C+ G++ 
Sbjct: 247 EGKFKPLGMTFNILMSALCNWGFVQSAKSFLCLMLKYGLVPDRYTFSTLIHGLCKVGSME 306

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           EA  LF+ +    +   +VTYN+LI+G    G  +   ++ + M  QG+ PD++TYTI++
Sbjct: 307 EALDLFERVTKEGMELEIVTYNSLINGYRLLGLTKEIPKIIQMMRGQGVEPDLVTYTILI 366

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
            G C+ G++    +   ++L +GLQ +   Y+  +    K G   E   L  E+   G  
Sbjct: 367 AGHCESGDVEEGMKVRKDVLDQGLQLNIVTYSVLLNALFKKGMFCEIDNLLGEIYNIGLD 426

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDG-FIPDHITYTSIIHASLEMGDLRRGRD 579
            D+I Y++L+HG CKLG +E+A ++   M      +P  + + SI+    + G L   R 
Sbjct: 427 MDVIAYSILIHGYCKLGEIEKALQVCNAMCSSQRVMPTSLNHFSILLGLCKKGLLVEARW 486

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
              N+ RK     +V Y V+I  +A  G +  A   + ++ V G+ P ++T N+L+ G C
Sbjct: 487 YLENVARKYQPTDVVFYNVVIDGYAKLGDIVNAVRLYDQITVAGMHPTIVTCNSLLYGYC 546

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
           ++  +  A   F  ++  G+LP   TYT L++    AG     L L+ EM+ + I+ +  
Sbjct: 547 KIGDLQLAESYFRAIQLSGLLPTAVTYTTLMDALSEAGEVNTMLSLFDEMVAKRIKANAV 606

Query: 700 THSAL---LLKQLDKDYKVHAVEYLESLTLGAE 729
           T+S +   L KQL  D  ++ ++ ++S  + A+
Sbjct: 607 TYSVIVKGLCKQLRFDEAINVLKDMDSKGINAD 639



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 134/507 (26%), Positives = 250/507 (49%), Gaps = 36/507 (7%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           ML+ GL+PD    + +I  L   G   +A +++  + + G++  IVTYN++++ +   G 
Sbjct: 280 MLKYGLVPDRYTFSTLIHGLCKVGSMEEALDLFERVTKEGMELEIVTYNSLINGYRLLGL 339

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
            +E  +++  M+G+G  P+ VTY +LI G   +G++E+   + +D+L  GL+++  +Y+ 
Sbjct: 340 TKEIPKIIQMMRGQGVEPDLVTYTILIAGHCESGDVEEGMKVRKDVLDQGLQLNIVTYSV 399

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS------------- 365
           ++    +KG+  E  NL  E+   G+   +  Y+ILI+G CK G +              
Sbjct: 400 LLNALFKKGMFCEIDNLLGEIYNIGLDMDVIAYSILIHGYCKLGEIEKALQVCNAMCSSQ 459

Query: 366 -----------------------DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
                                  +AR     + RK    D++ YN ++ GY + G+I  A
Sbjct: 460 RVMPTSLNHFSILLGLCKKGLLVEARWYLENVARKYQPTDVVFYNVVIDGYAKLGDIVNA 519

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
             L+D++    + PT+VT N+L+ G C+ GDL++A+     +   G+LP  +TYT +++ 
Sbjct: 520 VRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYFRAIQLSGLLPTAVTYTTLMDA 579

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
             + G ++     F+EM+ K ++ +   Y+  + G  K     EA  + ++M +KG   D
Sbjct: 580 LSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCKQLRFDEAINVLKDMDSKGINAD 639

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
            ITYN L+ G C+  +++ A  +   M+  G +P  +TY  +I+     G + +   L  
Sbjct: 640 PITYNTLIQGFCESENVQMAFHIHDIMLCRGLVPTPVTYNLLINVLCLKGKVIQAEILLE 699

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
           ++   G+      YT LI A  A+G    A +   ++   G   ++  ++A IN LC+ +
Sbjct: 700 SLRENGIKLRKFAYTTLIKAQCAKGMPINAVLLVGKLLDAGFEASIEDFSAAINRLCKRQ 759

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTIL 669
              +A+     M   GI P+   Y +L
Sbjct: 760 FAKEAFMFVPIMLSVGIYPDTQIYCVL 786



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 109/354 (30%), Positives = 169/354 (47%), Gaps = 1/354 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNG-LLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKP 241
           Y K   +E+ L V N M  +  ++P   N   I+  L   G  V+AR     +       
Sbjct: 439 YCKLGEIEKALQVCNAMCSSQRVMPTSLNHFSILLGLCKKGLLVEARWYLENVARKYQPT 498

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
            +V YN ++D + K G++  A+ L  ++   G  P  VT N L+ G+ + G+L+ A    
Sbjct: 499 DVVFYNVVIDGYAKLGDIVNAVRLYDQITVAGMHPTIVTCNSLLYGYCKIGDLQLAESYF 558

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
           R +   GL  +A +Y  ++   SE G +   L+L +EMV + +     TY++++ GLCK 
Sbjct: 559 RAIQLSGLLPTAVTYTTLMDALSEAGEVNTMLSLFDEMVAKRIKANAVTYSVIVKGLCKQ 618

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
            R  +A +   +M  K +  D I+YNTL+ G+C S N+  AF + D +  R LVPT VTY
Sbjct: 619 LRFDEAINVLKDMDSKGINADPITYNTLIQGFCESENVQMAFHIHDIMLCRGLVPTPVTY 678

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           N LI+ LC  G +  A+ L E++   GI      YT ++   C  G    A     ++L 
Sbjct: 679 NLLINVLCLKGKVIQAEILLESLRENGIKLRKFAYTTLIKAQCAKGMPINAVLLVGKLLD 738

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
            G +     ++  I    K     EA+     ML+ G  PD   Y VL   L K
Sbjct: 739 AGFEASIEDFSAAINRLCKRQFAKEAFMFVPIMLSVGIYPDTQIYCVLGRALQK 792


>gi|115479179|ref|NP_001063183.1| Os09g0417500 [Oryza sativa Japonica Group]
 gi|50253027|dbj|BAD29277.1| putative fertility restorer homologue A [Oryza sativa Japonica
           Group]
 gi|113631416|dbj|BAF25097.1| Os09g0417500 [Oryza sativa Japonica Group]
          Length = 618

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 140/460 (30%), Positives = 224/460 (48%), Gaps = 41/460 (8%)

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
           N ++ G  +   L +   L  +ML  G+  S  +YN +I     +G + +A  + ++MV 
Sbjct: 142 NAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVA 201

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
           R + P + TY  +I  LC+   + DA   F EM    + P++ +YN L+  + +  NI  
Sbjct: 202 RRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKH 261

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           A + + +L    LVP  V + TLIDGLC+   +  A+ +  +M    + P V  Y  +++
Sbjct: 262 ALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIH 321

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
           G+ + G    A  FF E++RKGL+PD F  +  + G    G    A R  E M   G   
Sbjct: 322 GAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIAL 381

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           +   YNVL+   CK G+L+EA     +M   G  P+ +TY+S+I    + G++     ++
Sbjct: 382 NAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIY 441

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
             M+ KG+ P +VTYT LIH HA  G ++ AF    EM+ KGI  N IT + L++GLCR 
Sbjct: 442 TEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRE 501

Query: 642 RRIDQA-----------------------------YGLFID------------MEEEGIL 660
            R+  A                             YGL+ID            M + G++
Sbjct: 502 NRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMV 561

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
           P+++TYT++I   C  G    A+ LY +M+   ++P  C 
Sbjct: 562 PDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVGVKPTKCA 601



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 141/459 (30%), Positives = 231/459 (50%), Gaps = 10/459 (2%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           ILD L+    K  M+ +   +F++ML  G++P V   N +I   R  G   KA EV+  M
Sbjct: 144 ILDGLV----KAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQM 199

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
               I P++VTY TM+ + C+E  + +A  L  EM+  G  PN  TYN L++   +   +
Sbjct: 200 VARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNI 259

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           + A     D+LK GL  +   +  +I G  +   + EA N+  +M    VAPT+  YN L
Sbjct: 260 KHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSL 319

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           I+G  + G   +A   F E++RK + PD  + + ++ G C  G +  A    + ++   +
Sbjct: 320 IHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGI 379

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
                 YN LID  C+ G+L+ A      M   G+ P+V+TY+ +++G  K G + +A  
Sbjct: 380 ALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMA 439

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
            + EM+ KG++P+   YT  I G  K GD   A+ LQ+EM  KG   + IT +VLV GLC
Sbjct: 440 IYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLC 499

Query: 535 KLGSLEEANELLRKMVG------DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           +   +++A   + +  G      +  I + +TY ++I+     G        F+ M   G
Sbjct: 500 RENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSG 559

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
           + P   TYT++I      G +  A M +++M   G++P 
Sbjct: 560 MVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVGVKPT 598



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 178/353 (50%), Gaps = 3/353 (0%)

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
           +L+  L +   + D     F  LR+  +P + + N +L G  ++  +   + LFDE+  R
Sbjct: 111 VLVIALSQMA-LPDEALSVFGRLRE--LPALPACNAILDGLVKAHMLARVWELFDEMLGR 167

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
            +VP+VVTYNTLI+     GD+  A ++ + M+ + I P+V+TYT M+   C+   +  A
Sbjct: 168 GMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDA 227

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
              F EM   G++P+ + Y   ++   K  +   A     ++L  G  P+ + +  L+ G
Sbjct: 228 EGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDG 287

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           LC+   + EA  +   M      P    Y S+IH +   G  +     F  ++RKGL P 
Sbjct: 288 LCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPD 347

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
             T ++++      G++++A  +   MQ  GI  N   YN LI+  C+   +D+A     
Sbjct: 348 EFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCT 407

Query: 653 DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            M E G+ PN  TY+ LI+ +   G  + A+ +Y EM+ + +EP+  T++AL+
Sbjct: 408 RMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALI 460



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 185/360 (51%)

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P L   N ++ GL K   ++     F EML + ++P +++YNTL+      G++ +A+ +
Sbjct: 136 PALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEV 195

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
           +D++ +R + P VVTY T+I  LC    +  A+ L   M   G+ P++ TY  +++   K
Sbjct: 196 WDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFK 255

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
             N+  A  F+ ++L+ GL P+   +TT I G  +    +EA  +  +M      P +  
Sbjct: 256 RDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPV 315

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           YN L+HG  + G  +EA    ++++  G  PD  T + ++    + G ++        M 
Sbjct: 316 YNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQ 375

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
           + G++     Y VLI  +   G L+ A +  + M   G+ PNV+TY++LI+G  +   ++
Sbjct: 376 QSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEME 435

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            A  ++ +M  +G+ PN  TYT LI+ +   G+   A  L KEM ++ I  +  T S L+
Sbjct: 436 IAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLV 495



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 88/355 (24%), Positives = 171/355 (48%), Gaps = 41/355 (11%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           + L+  + K+  ++  L+ +  +L+ GL+P+      +I  L       +A+ ++  M  
Sbjct: 247 NALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPR 306

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
           + + P++  YN+++    + G  QEAL    E+  +G  P+  T ++++ G    G+++ 
Sbjct: 307 YEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQV 366

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A   +  M + G+ ++A +YN +I  Y + G L EAL     M   GV P + TY+ LI 
Sbjct: 367 ATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLID 426

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           G  K G +  A   + EM+ K V P++++Y  L++G+ ++G++  AF L  E+  + +  
Sbjct: 427 GHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYS 486

Query: 417 TVVTYNTLIDGLCRYGDLEVA---------QQLKEN------------------------ 443
             +T + L+DGLCR   ++ A         Q+  E                         
Sbjct: 487 NAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYN 546

Query: 444 --------MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
                   M + G++PD  TYT+++ G C +G +  A   + +M++ G++P + A
Sbjct: 547 EACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVGVKPTKCA 601



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 117/228 (51%)

Query: 497 GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
           G +K    +  + L +EML +G  P ++TYN L++     G + +A E+  +MV     P
Sbjct: 147 GLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDP 206

Query: 557 DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
           + +TYT++I A  E   +     LF  M   G+ P L TY  L+ +H  R  ++ A +++
Sbjct: 207 NVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFY 266

Query: 617 SEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNA 676
            ++   G+ PN + +  LI+GLC+  RI +A  +F+DM    + P    Y  LI+    +
Sbjct: 267 YDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRS 326

Query: 677 GNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           G  QEAL  ++E++ + + PD  T S ++    D      A  +LE +
Sbjct: 327 GYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVM 374



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 105/204 (51%)

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           P L   N ++ GL K   L    EL  +M+G G +P  +TY ++I+A    GD+ +  ++
Sbjct: 136 PALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEV 195

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
           ++ M+ + + P +VTYT +I A      +  A   F EM+  G+RPN+ TYNAL++   +
Sbjct: 196 WDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFK 255

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
              I  A   + D+ + G++PN   +T LI+  C A    EA  ++ +M   E+ P    
Sbjct: 256 RDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPV 315

Query: 701 HSALLLKQLDKDYKVHAVEYLESL 724
           +++L+       Y   A+ + + +
Sbjct: 316 YNSLIHGAFRSGYAQEALAFFQEI 339


>gi|242078465|ref|XP_002444001.1| hypothetical protein SORBIDRAFT_07g005650 [Sorghum bicolor]
 gi|241940351|gb|EES13496.1| hypothetical protein SORBIDRAFT_07g005650 [Sorghum bicolor]
          Length = 824

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 191/767 (24%), Positives = 335/767 (43%), Gaps = 138/767 (17%)

Query: 84  QAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSA 143
           Q++ SD   +V+ L  +R KP +A  +F+ + +  G   D   +  I++IL  S   +  
Sbjct: 61  QSLSSDS--VVQALRCLRRKPAVAFAYFKDINSL-GFHHDFSTYSEIIQILSHSFQGKML 117

Query: 144 YWVVETVVCVNMHGILDVL--IGGGLSSCVSIKIL----DLLLLIYTKKSMVEQCLLVFN 197
             +   ++    +G  ++L  I     +C +  +L    + L+  YT     ++ + +F 
Sbjct: 118 VALFCEILSSTGNGGPEILTLIDHLSKTCATSHVLSYAVNCLIKAYTTSHDAQETVEMFC 177

Query: 198 KMLRNGLLPDVKNCNRIIKVLRDNGFSV-------------------------------- 225
            + R G +P +  CN ++K +  +G S                                 
Sbjct: 178 HLCRLGFVPTLWACNFLLKFVSQSGDSDMVVRAYDRMKCFQLTLDTQSLNIVTRSFFEAN 237

Query: 226 KAREVYRM---MGEFGIKPSI--------------------------------------- 243
           KA E +++   M E G+KP +                                       
Sbjct: 238 KADEAFQVWVRMIEMGVKPDVHGYSSFIIGLCECGKYDLAYNMVSRYAVLHEIIQERVAV 297

Query: 244 --VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
             + YN ++D  CKE +++EA ++L      G +P+   Y+ LI  + + G L +A   I
Sbjct: 298 ESIAYNMVIDGLCKEMKLEEAEKVLEIKTRHGSTPDLYGYSYLIRTYCKTGNLGKAWHHI 357

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
             M+  G++++ +    ++    + G++ E +   ++    G+      YNI +   CK 
Sbjct: 358 EAMVSHGIEINCYIVGYLLQCLKKLGMVSEVIVYFQKFRDLGLHLDGVLYNITMDAYCKL 417

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           G +++A     EM+   ++PD I Y  L+ GYC  G    A+ +F+++   N+ P VVTY
Sbjct: 418 GNMNEAVKLLNEMMAGGLVPDKIHYTCLINGYCLKGETENAWQVFEQMLKANIKPDVVTY 477

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           N L  G  R G +     L E+M++QG+ P+ +TY + +   C+ GNLS A   FN +  
Sbjct: 478 NILASGYSRNGAVIKVYDLLEHMVDQGLEPNSLTYGVAIACFCREGNLSEAEVLFNILEE 537

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
           KG+      Y++ + G L  G T  AY L   +  +G   D ++ + L++ LC    +EE
Sbjct: 538 KGIDNIEVLYSSMVCGYLYSGWTDHAYTLFLRVAKQGNMVDNLSCSKLINSLCIDKKVEE 597

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A+ +   M+    +PD I+Y+ +I A  +  D+      F +M+ +GLS  +V YTVL++
Sbjct: 598 ASTVCSMMLEKNAVPDVISYSKLISAYCQKRDMHNAHLWFLDMVDRGLSDVIV-YTVLMN 656

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVIT------------------------------- 630
            +   GRL+ A   F +M   GI+P+V+                                
Sbjct: 657 GYCKVGRLQEACDLFVQMINLGIKPDVVAYTVLLDGHIKEALHQGWQGIAKEWRSFRLRT 716

Query: 631 --------------------YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
                               Y  LI+G C+   +D+A GLF +M  +G+ P+ Y YT LI
Sbjct: 717 KHKTLLSSMKDMEIEPDVTCYTVLIDGHCKTEYLDEARGLFDEMLAKGLTPDVYAYTALI 776

Query: 671 NENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHA 717
           N  C+ G   +A  L +EM D  ++PD  T S L  + L +  K H+
Sbjct: 777 NGYCSQGEIAKAEDLLQEMTDNGMKPDVLTFSVLHQRTL-RHRKAHS 822


>gi|356497981|ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 543

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 144/499 (28%), Positives = 247/499 (49%)

Query: 173 IKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR 232
           +K  +LL  I  K       + +   M   G+ P+V   N +I  L     +V    V  
Sbjct: 26  VKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTHNIVINCLCRLNHTVFGFSVLG 85

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
           +M + G++PSIVT+ T+++  C EG + +A+  +  ++  G   +  T   +I G  + G
Sbjct: 86  LMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVG 145

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
               A   ++ M +    +   +Y+ ++ G  + G++ EAL+L  +M  +G+ P L TYN
Sbjct: 146 HSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYN 205

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
            LI+GLC + R  +A      M+RK ++PD+ ++N +   + ++G I  A  +F  +   
Sbjct: 206 CLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHM 265

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
            +   VVTYN++I   C    ++ A ++ + MI +G LP+++TY  +++G C+  N++ A
Sbjct: 266 GIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKA 325

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
             F  EM+  GL PD   ++T I G  K G    A  L   M   G  PDL T  +++ G
Sbjct: 326 MYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDG 385

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           L K     EA  L R++       D I Y+ I++     G L    +LF+ +  KG+   
Sbjct: 386 LFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKID 445

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
           +VTY ++I+     G L+ A     +M+  G  P+  TYN  + GL R   I ++    +
Sbjct: 446 VVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLM 505

Query: 653 DMEEEGILPNKYTYTILIN 671
            M+ +G   N  T  +LIN
Sbjct: 506 FMKGKGFRANATTTKLLIN 524



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 130/479 (27%), Positives = 226/479 (47%), Gaps = 35/479 (7%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A + Y  M      P +  +N +     K      A+ L+  M   G  PN  T+N++I 
Sbjct: 10  ALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTHNIVIN 69

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
              R         ++  M K+G++ S  ++  I+ G   +G + +A+   + +   G   
Sbjct: 70  CLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYES 129

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
              T   +I GLCK G  S A     +M  +N   D+ +Y+ ++ G C+ G + EA  LF
Sbjct: 130 DRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLF 189

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
            ++  + + P + TYN LI GLC +   + A  L  NM+ +GI+PDV T+ ++     K 
Sbjct: 190 SQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKT 249

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G +S A+  F+ M   G++ +   Y + I     L    +A  + + M+ KG  P+++TY
Sbjct: 250 GMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTY 309

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           N L+HG C+  ++ +A   L +MV +G  PD +T++++I    + G     ++LF  M +
Sbjct: 310 NSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHK 369

Query: 587 KGLSPTLVT-----------------------------------YTVLIHAHAARGRLEL 611
            G  P L T                                   Y+++++   + G+L  
Sbjct: 370 HGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLND 429

Query: 612 AFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
           A   FS +  KG++ +V+TYN +INGLC+   +D A  L + MEE G  P++ TY + +
Sbjct: 430 ALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFV 488



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 121/392 (30%), Positives = 199/392 (50%)

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
           II  L   G S  A    + M E      +  Y+ ++D  CK+G + EAL+L  +M G+G
Sbjct: 137 IINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKG 196

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
             PN  TYN LI G       ++A  L+ +M++ G+     ++N I   + + G++  A 
Sbjct: 197 IQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAK 256

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
           ++   M   G+   + TYN +I   C   ++ DA   F  M+RK  +P+I++YN+L++G+
Sbjct: 257 SIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGW 316

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
           C + N+ +A     E+ +  L P VVT++TLI G C+ G    A++L   M   G LPD+
Sbjct: 317 CETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDL 376

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
            T  I+++G  K    S A   F E+ +     D   Y+  + G    G  ++A  L   
Sbjct: 377 QTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSY 436

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           + +KG   D++TYN++++GLCK G L++A +LL KM  +G  PD  TY   +   L   +
Sbjct: 437 LSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYE 496

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
           + +       M  KG      T  +LI+  +A
Sbjct: 497 ISKSTKYLMFMKGKGFRANATTTKLLINYFSA 528



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/374 (30%), Positives = 180/374 (48%)

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
           A++L + M   GV P ++T+NI+I  LC+             M +  V P I+++ T++ 
Sbjct: 45  AISLIKHMSYIGVKPNVSTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVN 104

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
           G C  GN+ +A    D L+         T   +I+GLC+ G    A    + M  Q    
Sbjct: 105 GLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNL 164

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           DV  Y+ +V+G CK G +  A + F++M  KG+QP+ F Y   I G        EA  L 
Sbjct: 165 DVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLL 224

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
             M+ KG  PD+ T+NV+     K G +  A  +   M   G   + +TY SII A   +
Sbjct: 225 ANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCML 284

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
             ++   ++F+ M+RKG  P +VTY  LIH       +  A  +  EM   G+ P+V+T+
Sbjct: 285 NQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTW 344

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           + LI G C+  +   A  LF  M + G LP+  T  I+++         EA+ L++E+  
Sbjct: 345 STLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEK 404

Query: 692 REIEPDYCTHSALL 705
              + D   +S +L
Sbjct: 405 MNSDLDIIIYSIIL 418



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 115/385 (29%), Positives = 189/385 (49%), Gaps = 4/385 (1%)

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
           AL+   +MVT    P +  +N+L   + K    + A      M    V P++ ++N ++ 
Sbjct: 10  ALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTHNIVIN 69

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
             CR  +    F +   +    + P++VT+ T+++GLC  G++  A +  +++ + G   
Sbjct: 70  CLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYES 129

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           D  T   ++NG CK+G+ S A  +  +M  +    D  AY+  + G  K G   EA  L 
Sbjct: 130 DRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLF 189

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
            +M  KG  P+L TYN L+HGLC     +EA  LL  M+  G +PD  T+  I    L+ 
Sbjct: 190 SQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKT 249

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
           G + R + +F+ M   G+   +VTY  +I AH    +++ A   F  M  KG  PN++TY
Sbjct: 250 GMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTY 309

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           N+LI+G C  + +++A     +M   G+ P+  T++ LI   C AG    A  L+  M  
Sbjct: 310 NSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHK 369

Query: 692 REIEPDYCTHSALLLKQLDKDYKVH 716
               PD  T + +    LD  +K H
Sbjct: 370 HGQLPDLQTCAII----LDGLFKCH 390



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 113/445 (25%), Positives = 207/445 (46%), Gaps = 2/445 (0%)

Query: 262 ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC 321
           AL+   +M      P    +N+L    ++      A  LI+ M  +G+K +  ++N +I 
Sbjct: 10  ALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTHNIVIN 69

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK-NVI 380
                   V   ++   M   GV P++ T+  ++ GLC  G V+ A  RF + L+     
Sbjct: 70  CLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAI-RFVDHLKDMGYE 128

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
            D  +   ++ G C+ G+   A     ++  +N    V  Y+ ++DGLC+ G +  A  L
Sbjct: 129 SDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDL 188

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
              M  +GI P++ TY  +++G C       A      M+RKG+ PD   +       LK
Sbjct: 189 FSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLK 248

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
            G  S A  +   M   G   +++TYN ++   C L  +++A E+   M+  G +P+ +T
Sbjct: 249 TGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVT 308

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           Y S+IH   E  ++ +       M+  GL P +VT++ LI      G+   A   F  M 
Sbjct: 309 YNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMH 368

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
             G  P++ T   +++GL +     +A  LF ++E+     +   Y+I++N  C++G   
Sbjct: 369 KHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLN 428

Query: 681 EALRLYKEMLDREIEPDYCTHSALL 705
           +AL L+  +  + ++ D  T++ ++
Sbjct: 429 DALELFSYLSSKGVKIDVVTYNIMI 453



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 65/146 (44%)

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           D ++ M+     P +  + +L    A       A      M   G++PNV T+N +IN L
Sbjct: 12  DFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTHNIVINCL 71

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
           CRL      + +   M + G+ P+  T+T ++N  C  GN  +A+R    + D   E D 
Sbjct: 72  CRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDR 131

Query: 699 CTHSALLLKQLDKDYKVHAVEYLESL 724
            T  A++       +   A+ YL+ +
Sbjct: 132 YTRGAIINGLCKVGHSSAALSYLKKM 157



 Score = 43.9 bits (102), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 56/127 (44%)

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
           ++S + I I  ++L        +   L +F+ +   G+  DV   N +I  L   G    
Sbjct: 405 MNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDD 464

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A ++   M E G  P   TYN  +    +  E+ ++ + L  M+G+G   N  T  +LI 
Sbjct: 465 AEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLIN 524

Query: 287 GFSRNGE 293
            FS N E
Sbjct: 525 YFSANKE 531


>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 165/558 (29%), Positives = 284/558 (50%), Gaps = 37/558 (6%)

Query: 184  TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
            +K S  ++ + +F +M+ N   PDV   N +I +L   G   +A +++  + E  ++P+ 
Sbjct: 497  SKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTD 556

Query: 244  VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
             TYNT+L    +EG+++E ++LL  M      PN +TYN ++    +NGE+  A  ++  
Sbjct: 557  CTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYS 616

Query: 304  MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
            M   G      SYN ++ G  ++G L EA  +  +M  + +AP  AT   ++    + G 
Sbjct: 617  MTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQM-KKVLAPDYATVCTILPSFVRSGL 675

Query: 364  VSDARHRFFE-MLRKNVIPDIISYNTLLYGYCR----------SGNIGEAFLLFDEL--- 409
            + +A H   E +L+ +   D  S ++L+ G  +          + NI  + LL D+L   
Sbjct: 676  MKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLS 735

Query: 410  --------------------RSRNLVPTVVT--YNTLIDGLCRYGDLEVAQQLKENMINQ 447
                                +  NL  ++ T  YN LI GL     +++A++L   M   
Sbjct: 736  PIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRL 795

Query: 448  GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
            G  PD  TY ++++   K   +    +   EM  KG +     Y T I+G +K     EA
Sbjct: 796  GCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEA 855

Query: 508  YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
              L  +++++GF P   TY  L+ GL K G++E+A  L  +M+  G  P+   Y  +++ 
Sbjct: 856  INLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNG 915

Query: 568  SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
                GD  +  +LF +M+ +G++P + +YTV+I    A GRL     YF ++   G+ P+
Sbjct: 916  YRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPD 975

Query: 628  VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYK 687
            +ITYN LI+GL +  R+++A  L+ DME++GI PN YTY  LI     AG   EA ++Y+
Sbjct: 976  LITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYE 1035

Query: 688  EMLDREIEPDYCTHSALL 705
            E+L +  +P+  T++AL+
Sbjct: 1036 ELLAKGWKPNVFTYNALI 1053



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 139/511 (27%), Positives = 237/511 (46%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           VF+ M R  +  +V     +   +   G    A     +M E GI  +  TYN ++    
Sbjct: 123 VFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLV 182

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K G  +EA+++   M   G  P   TY+VL+  F +  + E   GL+ +M   G++ + +
Sbjct: 183 KSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVY 242

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           SY   I    + G L EA  +  +M   G  P + T  +LI  LC  GR++DA+  F++M
Sbjct: 243 SYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKM 302

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
              +  PD ++Y TLL     SG+      +++ L++      VV+Y   +D LC+ G +
Sbjct: 303 KASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRV 362

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A  + + M  +GI+P   +Y  +++G  K    + A E FN M   G  P+ + +   
Sbjct: 363 DEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLF 422

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I    K G++ +A +  E M +KG  PD++  N +++GL K G L  A  +  ++   G 
Sbjct: 423 INYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGI 482

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            PD+ITYT +I    +  +      +F  M+    +P ++    LI      GR   A+ 
Sbjct: 483 SPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWK 542

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F E++   + P   TYN L+ GL R  ++ +   L   M      PN  TY  +++  C
Sbjct: 543 IFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLC 602

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             G    AL +   M      PD  +++ ++
Sbjct: 603 KNGEVNYALDMLYSMTMNGCMPDLSSYNTVM 633



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 136/527 (25%), Positives = 248/527 (47%), Gaps = 15/527 (2%)

Query: 114 VETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSI 173
           V  + G+  + + +  ++  L++SG  R A  V + +      G++            ++
Sbjct: 161 VMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAA---DGVVP-----------TV 206

Query: 174 KILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRM 233
           +   +L+L + K+   E  + +  +M   G+ P+V +    I+VL   G   +A  + R 
Sbjct: 207 RTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRK 266

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M E G KP +VT   ++   C  G + +A ++ W+M+     P+ VTY  L+     +G+
Sbjct: 267 MEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGD 326

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
                 +   +   G   +  SY   +    + G + EAL++ +EM  +G+ P   +YN 
Sbjct: 327 SRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNS 386

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           LI G  K  R + A   F  M      P+  ++   +  + +SG   +A   ++ ++S+ 
Sbjct: 387 LISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKG 446

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           +VP VV  N ++ GL + G L +A+++   +   GI PD ITYT+M+    K  N   A 
Sbjct: 447 IVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAM 506

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
           + F EM+     PD  A  + I    K G  +EA+++  E+      P   TYN L+ GL
Sbjct: 507 KIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGL 566

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
            + G ++E  +LL  M  + F P+ ITY +++    + G++    D+  +M   G  P L
Sbjct: 567 GREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDL 626

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
            +Y  +++     GRL+ AF  F +M+ K + P+  T   ++    R
Sbjct: 627 SSYNTVMYGLVKEGRLDEAFWMFCQMK-KVLAPDYATVCTILPSFVR 672



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 146/488 (29%), Positives = 223/488 (45%), Gaps = 37/488 (7%)

Query: 185  KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
            K   V   L +   M  NG +PD+ + N ++  L   G   +A  ++  M +  + P   
Sbjct: 603  KNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMKKV-LAPDYA 661

Query: 245  TYNTMLDSFCKEGEMQEALELLWE-----------------MQG---RGCSPNGVTY--N 282
            T  T+L SF + G M+EAL  + E                 M+G   R  +   + +  N
Sbjct: 662  TVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAEN 721

Query: 283  VLITG--------------FSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
            +  +G              F ++ E   A  L++    LG+ +   SYN +ICG  ++ L
Sbjct: 722  IASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDL 781

Query: 329  LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNT 388
            +  A  L  EM   G  P   TY++++  + K  R+ D      EM  K      ++YNT
Sbjct: 782  IDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNT 841

Query: 389  LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
            ++ G  +S  + EA  L+ +L S    PT  TY  L+DGL + G++E A+ L + M+  G
Sbjct: 842  IISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECG 901

Query: 449  ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
              P+   Y I++NG    G+     E F  M+ +G+ PD  +YT  I      G  ++  
Sbjct: 902  CEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGL 961

Query: 509  RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
               +++   G  PDLITYN+L+HGL K G LEEA  L   M   G  P+  TY S+I   
Sbjct: 962  SYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYL 1021

Query: 569  LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
             + G       ++  +L KG  P + TY  LI  ++  G  E AF  +  M V G RPN 
Sbjct: 1022 GKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNS 1081

Query: 629  ITYNALIN 636
             TY  L N
Sbjct: 1082 STYMQLPN 1089



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 142/563 (25%), Positives = 256/563 (45%), Gaps = 37/563 (6%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           M   G++ +    N +I  L  +GF  +A +VY+ M   G+ P++ TY+ ++ +F K  +
Sbjct: 162 MKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRD 221

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
            +  + LL EM+ RG  PN  +Y + I    + G LE+A  ++R M + G K    +   
Sbjct: 222 AETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTV 281

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATY--------------------------- 351
           +I    + G L +A ++  +M      P   TY                           
Sbjct: 282 LIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADG 341

Query: 352 ---NILIY-----GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF 403
              N++ Y      LC+ GRV +A   F EM +K +IP   SYN+L+ G+ ++     A 
Sbjct: 342 YNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRAL 401

Query: 404 LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
            LF+ +      P   T+   I+   + G+   A +  E M ++GI+PDV+    ++ G 
Sbjct: 402 ELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGL 461

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
            K G L MA+  F+E+   G+ PD   YT  I    K  +  EA ++  EM+     PD+
Sbjct: 462 AKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDV 521

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
           +  N L+  L K G   EA ++  ++      P   TY +++      G ++    L   
Sbjct: 522 LAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEG 581

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           M      P ++TY  ++      G +  A      M + G  P++ +YN ++ GL +  R
Sbjct: 582 MNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGR 641

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE-MLDREIEPDYCTHS 702
           +D+A+ +F  M++  + P+  T   ++     +G  +EAL   +E +L  + + D  +  
Sbjct: 642 LDEAFWMFCQMKKV-LAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVH 700

Query: 703 ALLLKQLDKDYKVHAVEYLESLT 725
           +L+   L +D    ++E+ E++ 
Sbjct: 701 SLMEGILKRDGTEKSIEFAENIA 723



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 130/460 (28%), Positives = 225/460 (48%), Gaps = 13/460 (2%)

Query: 105  RIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIG 164
            R+   F+ + + +  +  D    CTIL   + SGL++ A           +H + + ++ 
Sbjct: 641  RLDEAFWMFCQMKKVLAPDYATVCTILPSFVRSGLMKEA-----------LHTVREYILQ 689

Query: 165  GGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFS 224
                S V    +  L+    K+   E+ +     +  +GLL D    + II+    +  +
Sbjct: 690  P--DSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHFCKHKEA 747

Query: 225  VKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVL 284
            + A E+ +     G+     +YN ++     E  +  A EL  EM+  GC P+  TY+++
Sbjct: 748  LAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLI 807

Query: 285  ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
            +    ++  +E    +  +M   G K +  +YN II G  +  +L EA+NL  ++++ G 
Sbjct: 808  LDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGF 867

Query: 345  APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
            +PT  TY  L+ GL K G + DA   F EML     P+   YN LL GY  +G+  +   
Sbjct: 868  SPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCE 927

Query: 405  LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
            LF+ +  + + P + +Y  +ID LC  G L       + + + G+ PD+ITY ++++G  
Sbjct: 928  LFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLG 987

Query: 465  KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
            K G L  A   +N+M +KG+ P+ + Y + I    K G  +EA ++ EE+LAKG+ P++ 
Sbjct: 988  KSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVF 1047

Query: 525  TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
            TYN L+ G    GS E A     +M+  G  P+  TY  +
Sbjct: 1048 TYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 1087



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 132/520 (25%), Positives = 261/520 (50%), Gaps = 2/520 (0%)

Query: 208 VKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLW 267
            ++CN +++++R +G      +V+ +M    IK ++ T+ T+  +   EG ++ A   L 
Sbjct: 101 TESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALP 160

Query: 268 EMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKG 327
            M+  G   N  TYN LI    ++G   +A  + + M   G+  +  +Y+ ++  + ++ 
Sbjct: 161 VMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRR 220

Query: 328 LLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYN 387
                + L  EM  RGV P + +Y I I  L + GR+ +A     +M  +   PD+++  
Sbjct: 221 DAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNT 280

Query: 388 TLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
            L+   C +G + +A  +F ++++ +  P  VTY TL+D     GD     ++   +   
Sbjct: 281 VLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKAD 340

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
           G   +V++YT  V+  C++G +  A + F+EM +KG+ P +++Y + I+G LK    + A
Sbjct: 341 GYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRA 400

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
             L   M   G  P+  T+ + ++   K G   +A +    M   G +PD +   ++++ 
Sbjct: 401 LELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYG 460

Query: 568 SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
             + G L   + +F+ +   G+SP  +TYT++I   +     + A   F+EM      P+
Sbjct: 461 LAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPD 520

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYK 687
           V+  N+LI+ L +  R ++A+ +F +++E  + P   TY  L+      G  +E ++L +
Sbjct: 521 VLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLE 580

Query: 688 EMLDREIEPDYCTHSALLLKQLDKDYKV-HAVEYLESLTL 726
            M      P+  T++  +L  L K+ +V +A++ L S+T+
Sbjct: 581 GMNSNSFPPNIITYNT-VLDCLCKNGEVNYALDMLYSMTM 619


>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
          Length = 812

 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 144/470 (30%), Positives = 227/470 (48%), Gaps = 18/470 (3%)

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
           N I+K L D+G  + A  +Y  M   G  P+  TYN ++D  CK+G   +AL++  EM  
Sbjct: 176 NTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLD 235

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
           RG  PN   Y VL++     G++++A  L+  M   G      +YN  + G  + G + E
Sbjct: 236 RGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNE 295

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
           A      +   G A  L  Y+ LI GL +  R  +    +  ML +N+ PD++ Y  ++ 
Sbjct: 296 AFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIR 355

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
           G   +G I +A    D ++ +  VP    YNT++  LC +GDLE A  L+  M+   ++ 
Sbjct: 356 GCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVL 415

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           D  T TIM+ G CK G +  A + F+EM   G  P    Y   I G  + G   EA  L 
Sbjct: 416 DSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLF 475

Query: 512 EEMLAKGFPP-------------DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
            +M     P              D  +   LVH +C+ G + +A +LLR ++  G +PD 
Sbjct: 476 HKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDV 535

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
           +TY ++I+   +  +L     LF  +  KG+SP  +TY  LI       R   A M F  
Sbjct: 536 VTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQN 595

Query: 619 MQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           +   G  P++  YN+++  LCR++++ QA  L++D      LP KY + +
Sbjct: 596 ILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLD-----YLPKKYNFPV 640



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 135/482 (28%), Positives = 230/482 (47%), Gaps = 15/482 (3%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G+  S   +  ++ +    G   +A++    M      P    YN ++     +G +  A
Sbjct: 132 GLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLA 191

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L   M+  G   +  +YN ++ G  ++G+  +AL + +EM+ RG+ P +  Y +L+  
Sbjct: 192 LALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSS 251

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           LC  G++ +A      M  K  +PD ++YN  L G C+ G + EAF     L+       
Sbjct: 252 LCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALG 311

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           +  Y+ LIDGL +    +      + M+ + I PDV+ YTIM+ G  + G +  A  F +
Sbjct: 312 LKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLD 371

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            M +KG  PD F Y T +      GD   A+ L+ EML      D  T  +++ GLCK G
Sbjct: 372 VMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRG 431

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV--- 594
            ++EA ++  +M   G  P  +TY ++I      G L   R LF+ M   G +P+L    
Sbjct: 432 LVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM-EMGNNPSLFLRL 490

Query: 595 -----------TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
                      +   L+H     G++  A+     +   G+ P+V+TYN LINGLC+ R 
Sbjct: 491 TLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARN 550

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSA 703
           +D A  LF +++ +GI P++ TY  LI+    A    +A+ L++ +L     P    +++
Sbjct: 551 LDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNS 610

Query: 704 LL 705
           ++
Sbjct: 611 MM 612



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 169/638 (26%), Positives = 264/638 (41%), Gaps = 108/638 (16%)

Query: 110 FFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVV---CVNMHGILDVLIGGG 166
           F R  E Q   +   FV+ TIL+ L++SG++  A  +   +V   C       +VL+ G 
Sbjct: 160 FSRMDEFQS--RPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDG- 216

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
                             K+ M    L +F++ML  G++P+VK    ++  L + G   +
Sbjct: 217 ----------------LCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDE 260

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A ++   M + G  P  VTYN  L   CK G + EA + L  +Q  G +     Y+ LI 
Sbjct: 261 AVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLID 320

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G  +    ++  G  + ML+  +      Y  +I G +E G + +AL+  + M  +G  P
Sbjct: 321 GLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVP 380

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
               YN ++  LC  G +  A     EML+ N++ D  +   ++ G C+ G + EA  +F
Sbjct: 381 DTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIF 440

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM---------------------- 444
           DE+      PTV+TYN LIDG  R G LE A+ L   M                      
Sbjct: 441 DEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDS 500

Query: 445 --------------------------INQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
                                     I+ G++PDV+TY  ++NG CK  NL  A   F E
Sbjct: 501 ESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKE 560

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           +  KG+ PD   Y T I G L+    ++A  L + +L  G  P L  YN ++  LC++  
Sbjct: 561 LQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKK 620

Query: 539 LEEANELLRKMVGDGF-IPDHITYTSIIHASLEMGDLRRG-RDLFNNMLRKGLSPTLVTY 596
           L +A  L    +   +  P      +  H  +E G L  G R+L                
Sbjct: 621 LSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELI--------------- 665

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
                      +++  + Y S        P    Y   + GLC++RR D A  +F  ++E
Sbjct: 666 -----------KIDQEYGYISS------NP----YTIWLIGLCQVRRTDDALRIFHTLQE 704

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
            GI        +LIN  C   N   A+ +    L + I
Sbjct: 705 FGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSI 742



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 67/146 (45%)

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           D   +    GL  +   +  L+ AH++ GR   A   FS M     RP    YN ++  L
Sbjct: 123 DALADARAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKAL 182

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
                I  A  L+  M   G  PN+ TY +L++  C  G   +AL+++ EMLDR I P+ 
Sbjct: 183 VDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNV 242

Query: 699 CTHSALLLKQLDKDYKVHAVEYLESL 724
             ++ LL    +      AV+ L S+
Sbjct: 243 KIYTVLLSSLCNAGKIDEAVQLLGSM 268


>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Vitis vinifera]
          Length = 590

 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 144/529 (27%), Positives = 257/529 (48%), Gaps = 6/529 (1%)

Query: 106 IALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVC---VNMHGILDVL 162
           ++  FF+WVE+    K       T++  L +    ++A  ++E +     ++   +L+ +
Sbjct: 57  VSWAFFKWVESNLNHKHSLQSSWTMIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAV 116

Query: 163 IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG 222
           +        + +IL  L++ Y    M +  + VF  M  +G  P +  C  ++  L    
Sbjct: 117 VRIHDDPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKAR 176

Query: 223 FSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYN 282
            +    +VY+ M   G+ P+I  +N ++ + CK G++++A +LL EM+ R   P+  TYN
Sbjct: 177 LTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYN 236

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
            LI+ + + G   +A G+   M + G+     +YN +I G+  +G + EAL L  E+   
Sbjct: 237 TLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREI--N 294

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           G  P   TY  LI G C+   + +A      M  + + P +++YN++L   C  G I +A
Sbjct: 295 GATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDA 354

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
             L +E+  R + P  VT NTLI+  C+ GD+  A ++K+ M+  G+ PD  T+  +++G
Sbjct: 355 NRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHG 414

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            CK+  +  A+EF  EML  G  P    Y+  +       +     RL +E+  KG   D
Sbjct: 415 FCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVD 474

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
           +  Y  L+  LCK+  +E A  +   M G G   D + YTS+ +A  + G      D+ +
Sbjct: 475 ISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLD 534

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
            M ++ L  TL  Y     ++A  G + L   +   ++ + I  N++ Y
Sbjct: 535 EMDKRRLMITLKIYRCFSASYAGDGSI-LGLFWDHVIERRLISKNILKY 582



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/401 (31%), Positives = 206/401 (51%), Gaps = 2/401 (0%)

Query: 260 QEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI 319
           Q+A+++   M+  G  P+     VL+   ++         + + M+++G+  + H +N +
Sbjct: 144 QDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVL 203

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           I    + G + +A  L  EM +R + P L TYN LI   CK G   +A      M R  V
Sbjct: 204 IHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGV 263

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
            PDI++YN+L+YG+CR G + EA  LF E+      P  VTY TLIDG CR  DLE A +
Sbjct: 264 SPDIVTYNSLIYGFCREGRMREALRLFREINGA--TPNHVTYTTLIDGYCRVNDLEEALR 321

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           L+E M  +G+ P V+TY  ++   C+ G +  A    NEM  + ++PD     T I    
Sbjct: 322 LREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYC 381

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           K+GD   A +++++ML  G  PD  T+  L+HG CKL  ++ A E L +M+  GF P + 
Sbjct: 382 KIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYS 441

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
           TY+ ++ +  +  +      L + + RKGL   +  Y  LI       ++E A   F+ M
Sbjct: 442 TYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLM 501

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
           Q KG++ + + Y +L     +  +   A  +  +M++  ++
Sbjct: 502 QGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLM 542



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 128/472 (27%), Positives = 221/472 (46%), Gaps = 19/472 (4%)

Query: 240 KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG--CSP---------------NGVTYN 282
           K S+ +  TM+ +  K  + + A  LL  +  R    SP               N    +
Sbjct: 72  KHSLQSSWTMIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVRIHDDPDSNSQILS 131

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
            L+  ++ +   + A  +   M   G K   H+   ++   ++  L      + ++MV  
Sbjct: 132 WLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRV 191

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           GV P +  +N+LI+  CK G V  A     EM  + + PD+ +YNTL+  YC+ G   EA
Sbjct: 192 GVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEA 251

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
             + D +    + P +VTYN+LI G CR G +  A +L   +   G  P+ +TYT +++G
Sbjct: 252 LGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHVTYTTLIDG 309

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            C++ +L  A      M  +GL P    Y + +    + G   +A RL  EM  +   PD
Sbjct: 310 YCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPD 369

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
            +T N L++  CK+G +  A ++ +KM+  G  PD  T+ ++IH   ++ ++   ++   
Sbjct: 370 NVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLF 429

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
            ML  G SP+  TY+ L+ ++  +   E       E+  KG+  ++  Y ALI  LC++ 
Sbjct: 430 EMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKID 489

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           +I+ A  +F  M+ +G+  +   YT L      AG    A  +  EM  R +
Sbjct: 490 KIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRL 541



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 175/362 (48%), Gaps = 3/362 (0%)

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
           DA   F  M      P + +   LL    ++      + ++ ++    +VP +  +N LI
Sbjct: 145 DAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLI 204

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
              C+ GD+E A+QL   M ++ I PD+ TY  +++  CK G    A    + M R G+ 
Sbjct: 205 HACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVS 264

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           PD   Y + I G  + G   EA RL  E+   G  P+ +TY  L+ G C++  LEEA  L
Sbjct: 265 PDIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHVTYTTLIDGYCRVNDLEEALRL 322

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
              M  +G  P  +TY SI+    E G ++    L N M  + + P  VT   LI+A+  
Sbjct: 323 REVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCK 382

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
            G +  A     +M   G++P+  T+ ALI+G C+L  +D A     +M + G  P+  T
Sbjct: 383 IGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYST 442

Query: 666 YTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
           Y+ L++   +  N +  +RL  E+  + +  D   + A L+++L K  K+ + E + +L 
Sbjct: 443 YSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRA-LIRRLCKIDKIESAERIFTLM 501

Query: 726 LG 727
            G
Sbjct: 502 QG 503


>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Glycine max]
          Length = 642

 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 137/472 (29%), Positives = 237/472 (50%), Gaps = 34/472 (7%)

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
           +RM GEF  K ++ ++N++L+   +EG    ALE                YN ++   S 
Sbjct: 120 HRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEF---------------YNHVVASKS- 163

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
                           L +  +A ++N +I      GL+ +A+ +  E+  R  AP   T
Sbjct: 164 ----------------LNIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYT 207

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           Y+ L++GLCK  R+ +A     EM  +   P+++++N L+   C+ G++G A  L D + 
Sbjct: 208 YSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMF 267

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
            +  VP  VTYN L+ GLC  G LE A  L   M++   +P+ +T+  ++NG    G  S
Sbjct: 268 LKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRAS 327

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
                   +  +G + + + Y++ I+G  K G  ++A  L +EM+ KG  P+ I Y+ L+
Sbjct: 328 DGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALI 387

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
            GLC+ G L+EA   L +M   G++P+  TY+S++    E GD  +   ++  M      
Sbjct: 388 DGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCI 447

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
              V Y++LI+     G+   A M + +M  +GI+ +V+ Y+++I+G C    ++Q   L
Sbjct: 448 HNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKL 507

Query: 651 FIDMEEEG--ILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
           F  M  +G  + P+  TY IL+N  C   +   A+ +   MLD+  +PD+ T
Sbjct: 508 FNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFIT 559



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/528 (26%), Positives = 261/528 (49%), Gaps = 27/528 (5%)

Query: 183 YTKKSMVEQCLLVFNKMLRN-GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM---GEFG 238
           Y K  + E+ + +F++M         VK+ N ++ V+   G   +A E Y  +       
Sbjct: 106 YGKAHLPEKAVDLFHRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLN 165

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           I P+ +T+N ++ + C+ G + +A+E+  E+  R C+P+  TY+ L+ G  +   +++A 
Sbjct: 166 IHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAV 225

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L+ +M   G   +  ++N +I    +KG L  A  L + M  +G  P   TYN L++GL
Sbjct: 226 SLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGL 285

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C  G++  A     +M+    +P+ +++ TL+ G+   G   +   +   L +R      
Sbjct: 286 CLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNE 345

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
             Y++LI GLC+ G    A +L + M+ +G  P+ I Y+ +++G C+ G L  AR F +E
Sbjct: 346 YVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSE 405

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M  KG  P+ F Y++ + G  + GD+ +A  + +EM       + + Y++L++GLCK G 
Sbjct: 406 MKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGK 465

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG--LSPTLVTY 596
             EA  + ++M+  G   D + Y+S+IH       + +G  LFN ML +G  + P ++TY
Sbjct: 466 FMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITY 525

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT---------------------YNALI 635
            +L++A   +  +  A    + M  +G  P+ IT                      + L+
Sbjct: 526 NILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIFLKTLRENMNPPQDGREFLDELV 585

Query: 636 NGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
             L + +R   A  +   M  + +LP   T+ +++ + C   N ++A+
Sbjct: 586 VRLVKRQRTIGASKIIEVMMHKFLLPKASTWAMVVQQVCKPKNVRKAI 633



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 179/339 (52%), Gaps = 12/339 (3%)

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDEL---RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
           + S+N++L    + G    A   ++ +   +S N+ P  +T+N +I  +CR G ++ A +
Sbjct: 132 VKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIE 191

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           +   +  +   PD  TY+ +++G CK   +  A    +EM  +G  P+  A+   I+   
Sbjct: 192 VFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALC 251

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           K GD   A +L + M  KG  P+ +TYN LVHGLC  G LE+A  LL +MV +  +P+ +
Sbjct: 252 KKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDV 311

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
           T+ ++I+  +  G    G  +  ++  +G       Y+ LI      G+   A   + EM
Sbjct: 312 TFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEM 371

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
             KG  PN I Y+ALI+GLCR  ++D+A G   +M+ +G LPN +TY+ L+     AG+ 
Sbjct: 372 VGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDS 431

Query: 680 QEALRLYKEMLDREIEPDYCTHS----ALLLKQLDKDYK 714
            +A+ ++KEM +     + C H+    ++L+  L KD K
Sbjct: 432 HKAILVWKEMAN-----NNCIHNEVCYSILINGLCKDGK 465



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 168/328 (51%)

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
           N+ P+ +++N ++   CR G + +A  +F E+  RN  P   TY+TL+ GLC+   ++ A
Sbjct: 165 NIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEA 224

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
             L + M  +G  P+++ + ++++  CK G+L  A +  + M  KG  P+   Y   + G
Sbjct: 225 VSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHG 284

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
               G   +A  L  +M++    P+ +T+  L++G    G   +   +L  +   G   +
Sbjct: 285 LCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGN 344

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
              Y+S+I    + G   +  +L+  M+ KG  P  + Y+ LI      G+L+ A  + S
Sbjct: 345 EYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLS 404

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
           EM+ KG  PN  TY++L+ G        +A  ++ +M     + N+  Y+ILIN  C  G
Sbjct: 405 EMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDG 464

Query: 678 NWQEALRLYKEMLDREIEPDYCTHSALL 705
            + EAL ++K+ML R I+ D   +S+++
Sbjct: 465 KFMEALMVWKQMLSRGIKLDVVAYSSMI 492



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 4/134 (2%)

Query: 576 RGRDLFNNMLRK-GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK---GIRPNVITY 631
           +  DLF+ M  +     T+ ++  +++     G    A  +++ +       I PN +T+
Sbjct: 114 KAVDLFHRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTF 173

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           N +I  +CRL  +D+A  +F ++      P+ YTY+ L++  C      EA+ L  EM  
Sbjct: 174 NLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQV 233

Query: 692 REIEPDYCTHSALL 705
               P+    + L+
Sbjct: 234 EGTFPNLVAFNVLI 247


>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
 gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
          Length = 794

 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 144/470 (30%), Positives = 227/470 (48%), Gaps = 18/470 (3%)

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
           N I+K L D+G  + A  +Y  M   G  P+  TYN ++D  CK+G   +AL++  EM  
Sbjct: 176 NTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLD 235

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
           RG  PN   Y VL++     G++++A  L+  M   G      +YN  + G  + G + E
Sbjct: 236 RGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNE 295

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
           A      +   G A  L  Y+ LI GL +  R  +    +  ML +N+ PD++ Y  ++ 
Sbjct: 296 AFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIR 355

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
           G   +G I +A    D ++ +  VP    YNT++  LC +GDLE A  L+  M+   ++ 
Sbjct: 356 GCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVL 415

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           D  T TIM+ G CK G +  A + F+EM   G  P    Y   I G  + G   EA  L 
Sbjct: 416 DSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLF 475

Query: 512 EEMLAKGFPP-------------DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
            +M     P              D  +   LVH +C+ G + +A +LLR ++  G +PD 
Sbjct: 476 HKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDV 535

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
           +TY ++I+   +  +L     LF  +  KG+SP  +TY  LI       R   A M F  
Sbjct: 536 VTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQN 595

Query: 619 MQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           +   G  P++  YN+++  LCR++++ QA  L++D      LP KY + +
Sbjct: 596 ILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLD-----YLPKKYNFPV 640



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 135/482 (28%), Positives = 230/482 (47%), Gaps = 15/482 (3%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G+  S   +  ++ +    G   +A++    M      P    YN ++     +G +  A
Sbjct: 132 GLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLA 191

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L   M+  G   +  +YN ++ G  ++G+  +AL + +EM+ RG+ P +  Y +L+  
Sbjct: 192 LALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSS 251

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           LC  G++ +A      M  K  +PD ++YN  L G C+ G + EAF     L+       
Sbjct: 252 LCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALG 311

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           +  Y+ LIDGL +    +      + M+ + I PDV+ YTIM+ G  + G +  A  F +
Sbjct: 312 LKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLD 371

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            M +KG  PD F Y T +      GD   A+ L+ EML      D  T  +++ GLCK G
Sbjct: 372 VMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRG 431

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV--- 594
            ++EA ++  +M   G  P  +TY ++I      G L   R LF+ M   G +P+L    
Sbjct: 432 LVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM-EMGNNPSLFLRL 490

Query: 595 -----------TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
                      +   L+H     G++  A+     +   G+ P+V+TYN LINGLC+ R 
Sbjct: 491 TLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARN 550

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSA 703
           +D A  LF +++ +GI P++ TY  LI+    A    +A+ L++ +L     P    +++
Sbjct: 551 LDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNS 610

Query: 704 LL 705
           ++
Sbjct: 611 MM 612



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 169/638 (26%), Positives = 264/638 (41%), Gaps = 108/638 (16%)

Query: 110 FFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVV---CVNMHGILDVLIGGG 166
           F R  E Q   +   FV+ TIL+ L++SG++  A  +   +V   C       +VL+ G 
Sbjct: 160 FSRMDEFQS--RPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDG- 216

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
                             K+ M    L +F++ML  G++P+VK    ++  L + G   +
Sbjct: 217 ----------------LCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDE 260

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A ++   M + G  P  VTYN  L   CK G + EA + L  +Q  G +     Y+ LI 
Sbjct: 261 AVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLID 320

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G  +    ++  G  + ML+  +      Y  +I G +E G + +AL+  + M  +G  P
Sbjct: 321 GLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVP 380

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
               YN ++  LC  G +  A     EML+ N++ D  +   ++ G C+ G + EA  +F
Sbjct: 381 DTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIF 440

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM---------------------- 444
           DE+      PTV+TYN LIDG  R G LE A+ L   M                      
Sbjct: 441 DEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDS 500

Query: 445 --------------------------INQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
                                     I+ G++PDV+TY  ++NG CK  NL  A   F E
Sbjct: 501 ESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKE 560

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           +  KG+ PD   Y T I G L+    ++A  L + +L  G  P L  YN ++  LC++  
Sbjct: 561 LQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKK 620

Query: 539 LEEANELLRKMVGDGF-IPDHITYTSIIHASLEMGDLRRG-RDLFNNMLRKGLSPTLVTY 596
           L +A  L    +   +  P      +  H  +E G L  G R+L                
Sbjct: 621 LSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELI--------------- 665

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
                      +++  + Y S        P    Y   + GLC++RR D A  +F  ++E
Sbjct: 666 -----------KIDQEYGYISS------NP----YTIWLIGLCQVRRTDDALRIFHTLQE 704

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
            GI        +LIN  C   N   A+ +    L + I
Sbjct: 705 FGIDITPACCALLINYLCWDRNLNAAVDIMLYALSKSI 742



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 67/146 (45%)

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           D   +    GL  +   +  L+ AH++ GR   A   FS M     RP    YN ++  L
Sbjct: 123 DALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKAL 182

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
                I  A  L+  M   G  PN+ TY +L++  C  G   +AL+++ EMLDR I P+ 
Sbjct: 183 VDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNV 242

Query: 699 CTHSALLLKQLDKDYKVHAVEYLESL 724
             ++ LL    +      AV+ L S+
Sbjct: 243 KIYTVLLSSLCNAGKIDEAVQLLGSM 268


>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
          Length = 794

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 144/470 (30%), Positives = 227/470 (48%), Gaps = 18/470 (3%)

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
           N I+K L D+G  + A  +Y  M   G  P+  TYN ++D  CK+G   +AL++  EM  
Sbjct: 176 NTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLD 235

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
           RG  PN   Y VL++     G++++A  L+  M   G      +YN  + G  + G + E
Sbjct: 236 RGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNE 295

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
           A      +   G A  L  Y+ LI GL +  R  +    +  ML +N+ PD++ Y  ++ 
Sbjct: 296 AFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIR 355

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
           G   +G I +A    D ++ +  VP    YNT++  LC +GDLE A  L+  M+   ++ 
Sbjct: 356 GCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVL 415

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           D  T TIM+ G CK G +  A + F+EM   G  P    Y   I G  + G   EA  L 
Sbjct: 416 DSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLF 475

Query: 512 EEMLAKGFPP-------------DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
            +M     P              D  +   LVH +C+ G + +A +LLR ++  G +PD 
Sbjct: 476 HKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDV 535

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
           +TY ++I+   +  +L     LF  +  KG+SP  +TY  LI       R   A M F  
Sbjct: 536 VTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQN 595

Query: 619 MQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           +   G  P++  YN+++  LCR++++ QA  L++D      LP KY + +
Sbjct: 596 ILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLD-----YLPKKYNFPV 640



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 135/482 (28%), Positives = 230/482 (47%), Gaps = 15/482 (3%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G+  S   +  ++ +    G   +A++    M      P    YN ++     +G +  A
Sbjct: 132 GLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLA 191

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L   M+  G   +  +YN ++ G  ++G+  +AL + +EM+ RG+ P +  Y +L+  
Sbjct: 192 LALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSS 251

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           LC  G++ +A      M  K  +PD ++YN  L G C+ G + EAF     L+       
Sbjct: 252 LCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALG 311

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           +  Y+ LIDGL +    +      + M+ + I PDV+ YTIM+ G  + G +  A  F +
Sbjct: 312 LKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLD 371

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            M +KG  PD F Y T +      GD   A+ L+ EML      D  T  +++ GLCK G
Sbjct: 372 VMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRG 431

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV--- 594
            ++EA ++  +M   G  P  +TY ++I      G L   R LF+ M   G +P+L    
Sbjct: 432 LVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKM-EMGNNPSLFLRL 490

Query: 595 -----------TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
                      +   L+H     G++  A+     +   G+ P+V+TYN LINGLC+ R 
Sbjct: 491 TLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARN 550

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSA 703
           +D A  LF +++ +GI P++ TY  LI+    A    +A+ L++ +L     P    +++
Sbjct: 551 LDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNS 610

Query: 704 LL 705
           ++
Sbjct: 611 MM 612



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 165/603 (27%), Positives = 267/603 (44%), Gaps = 38/603 (6%)

Query: 110 FFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVV---CVNMHGILDVLIGGG 166
           F R  E Q   +   FV+ TIL+ L++SG++  A  +   +V   C       +VL+ G 
Sbjct: 160 FSRMDEFQS--RPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDG- 216

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
                             K+ M    L +F++ML  G++P+VK    ++  L + G   +
Sbjct: 217 ----------------LCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDE 260

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A ++   M + G  P  VTYN  L   CK G + EA + L  +Q  G +     Y+ LI 
Sbjct: 261 AVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLID 320

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           G  +    ++  G  + ML+  +      Y  +I G +E G + +AL+  + M  +G  P
Sbjct: 321 GLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVP 380

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
               YN ++  LC  G +  A     EML+ N++ D  +   ++ G C+ G + EA  +F
Sbjct: 381 DTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIF 440

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM-------------INQGILPDV 453
           DE+      PTV+TYN LIDG  R G LE A+ L   M             +    + D 
Sbjct: 441 DEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDS 500

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
            +   +V+  C+ G +  A +    ++  G+ PD   Y T I G  K  +   A RL +E
Sbjct: 501 ESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKE 560

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           +  KG  PD ITY  L+ GL +     +A  L + ++  G  P    Y S++ +   M  
Sbjct: 561 LQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKK 620

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA--ARGRLELAFMYFSEMQVKGIRPNVITY 631
           L +  +L+ + L K  +   V   VL +AH     G L+       ++  +    +   Y
Sbjct: 621 LSQAINLWLDYLPKKYNFP-VESEVLANAHKEIEDGSLDDGVRELIKIDQEYGSISSNPY 679

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
              + GLC++RR D A  +F  ++E GI        +LIN  C   N   A+ +    L 
Sbjct: 680 TIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALS 739

Query: 692 REI 694
           + I
Sbjct: 740 KSI 742



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 67/146 (45%)

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           D   +    GL  +   +  L+ AH++ GR   A   FS M     RP    YN ++  L
Sbjct: 123 DALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKAL 182

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
                I  A  L+  M   G  PN+ TY +L++  C  G   +AL+++ EMLDR I P+ 
Sbjct: 183 VDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNV 242

Query: 699 CTHSALLLKQLDKDYKVHAVEYLESL 724
             ++ LL    +      AV+ L S+
Sbjct: 243 KIYTVLLSSLCNAGKIDEAVQLLGSM 268


>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 146/476 (30%), Positives = 234/476 (49%), Gaps = 1/476 (0%)

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +L+  C+ G+  E+L  L  +  +G  P+ V    LI GF  +  L++A  ++  +   G
Sbjct: 68  LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG 127

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
                +SYN +I G+S+   +  A  + + M +RG +P + TYNI+I  LC  G++  A 
Sbjct: 128 -DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAF 186

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               E+L+    P +I+Y  L+      G I EA  LFDEL SR L P + TYN +I G+
Sbjct: 187 EVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGI 246

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G  + A     ++  +G  PDV++Y I++                 +M+  G +P+ 
Sbjct: 247 CKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNV 306

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             ++  I+   + G   EA  + E M  KG  PD  +Y+ L+   CK G L+ A E L K
Sbjct: 307 VTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEK 366

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           MV DG +PD + Y +I+    + G      D+F  +   G  PT+  Y  +  A  + G 
Sbjct: 367 MVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGN 426

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
              A    SEM  KGI P+ ITYN+LI+ LCR   +D+A GL +DME     P   ++ I
Sbjct: 427 KIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNI 486

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           ++   C A    E + L   M+++   P+  ++  L+       ++  A+E   SL
Sbjct: 487 VLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSL 542



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 201/402 (50%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           PDV + N +I           A +V+  M   G  P +VTYN M+ S C  G+++ A E+
Sbjct: 129 PDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEV 188

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           + E+   GC P+ +TY +LI      G + +A  L  +++  GL+   ++YN II G  +
Sbjct: 189 MDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICK 248

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
           +G+   AL+    +  RG  P + +YNIL+       R  D      +M+     P++++
Sbjct: 249 EGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVT 308

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           ++ L+  +CR G + EA  + + ++ + L P   +Y+ LI   C+ G L++A +  E M+
Sbjct: 309 HSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMV 368

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
           + G LPD++ Y  ++   CK G   +A + F ++   G  P   AY T  +     G+  
Sbjct: 369 SDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKI 428

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           +A  +  EM+ KG  PD ITYN L+  LC+ G ++EA  LL  M    F P  I++  ++
Sbjct: 429 KALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVL 488

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
               +   +  G +L   M+ KG  P   +Y +LI   A  G
Sbjct: 489 LGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAG 530



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 134/448 (29%), Positives = 217/448 (48%), Gaps = 1/448 (0%)

Query: 191 QCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTML 250
           + L     ++  G  PDV  C ++IK   ++    KA  V  ++  +G  P + +YN M+
Sbjct: 80  ESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG-DPDVYSYNAMI 138

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
             F K  ++  A ++   M+ RG SP+ VTYN++I      G+LE A  ++ ++LK G K
Sbjct: 139 SGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCK 198

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
            S  +Y  +I     +G + EAL L +E+V+RG+ P L TYN +I G+CK G    A   
Sbjct: 199 PSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDF 258

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
              +  +   PD++SYN LL  +       +   L  ++      P VVT++ LI   CR
Sbjct: 259 VRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCR 318

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
            G +  A  + E M  +G+ PD  +Y  +++  CK G L +A E+  +M+  G  PD   
Sbjct: 319 EGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVN 378

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           Y T +A   K G    A  + E++   G PP +  YN +   L   G+  +A E++ +M+
Sbjct: 379 YNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMI 438

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
             G  PD ITY S+I      G +     L  +M      PT++++ +++       R+ 
Sbjct: 439 RKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVF 498

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGL 638
                   M  KG  PN  +Y  LI G+
Sbjct: 499 EGIELLITMVEKGCLPNETSYVLLIEGI 526



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/407 (30%), Positives = 206/407 (50%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           ++K + ++    VF++M   G  PDV   N +I  L   G    A EV   + + G KPS
Sbjct: 141 FSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPS 200

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           ++TY  ++++   EG + EALEL  E+  RG  P+  TYN +I G  + G  ++A   +R
Sbjct: 201 VITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVR 260

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            +   G      SYN ++  +  K    +   L ++MV  G  P + T++ILI   C+ G
Sbjct: 261 HLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREG 320

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           RV +A +    M  K + PD  SY+ L+  +C+ G +  A    +++ S   +P +V YN
Sbjct: 321 RVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYN 380

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           T++  LC++G  ++A  + E +   G  P V  Y  M +     GN   A E  +EM+RK
Sbjct: 381 TILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRK 440

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G+ PD   Y + I+   + G   EA  L  +M A  F P +I++N+++ G+CK   + E 
Sbjct: 441 GIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEG 500

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
            ELL  MV  G +P+  +Y  +I      G      +L N++ R G+
Sbjct: 501 IELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSLYRLGV 547



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 132/274 (48%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           ++LL  +  KS  E    +   M+ +G  P+V   + +I      G   +A  V  +M E
Sbjct: 275 NILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKE 334

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G+ P   +Y+ ++ +FCKEG +  A+E L +M   GC P+ V YN ++    + G  + 
Sbjct: 335 KGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADL 394

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  +   + ++G   +  +YN +       G  ++AL +  EM+ +G+ P   TYN LI 
Sbjct: 395 ALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLIS 454

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
            LC+ G V +A     +M      P +IS+N +L G C++  + E   L   +  +  +P
Sbjct: 455 CLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLP 514

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
              +Y  LI+G+   G    A +L  ++   G++
Sbjct: 515 NETSYVLLIEGIAYAGWRAEAMELANSLYRLGVI 548



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 100/197 (50%), Gaps = 1/197 (0%)

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           L++  C+ G   E+   L  +V  GF PD +  T +I       +L++   +   +   G
Sbjct: 68  LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG 127

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
             P + +Y  +I   +   +++ A   F  M+ +G  P+V+TYN +I  LC   +++ A+
Sbjct: 128 -DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAF 186

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQ 708
            +  ++ ++G  P+  TYTILI      G   EAL L+ E++ R + PD  T++A++   
Sbjct: 187 EVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGI 246

Query: 709 LDKDYKVHAVEYLESLT 725
             +  +  A++++  L+
Sbjct: 247 CKEGMEDRALDFVRHLS 263


>gi|297811615|ref|XP_002873691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319528|gb|EFH49950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 938

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 165/560 (29%), Positives = 259/560 (46%), Gaps = 37/560 (6%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           +Q  LV++KM+  G+ PDV   N +I  L   G    A  + R      I    VTYNT+
Sbjct: 111 DQVSLVYSKMIACGVSPDVFALNVLIHSLCKVGQLSFAISLLR---NRVISVDTVTYNTV 167

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI-------- 301
           +   C+ G   EA + L EM   G  P+ V++N LI GF + G   +A+ L+        
Sbjct: 168 ISGLCEHGLADEAYQFLSEMVKIGILPDTVSFNTLIDGFCKVGNFARAKALVDEISELNL 227

Query: 302 --------------------RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
                               RDM+  G      +++ II    + G ++E   L  EM  
Sbjct: 228 ITHTILISSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKDGKVMEGGLLLREMEE 287

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
            GV P   TY  L+  L K      A   + +M+ + +  D++ Y  L+ G  ++G++ E
Sbjct: 288 MGVYPNHVTYTTLVDSLFKAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGDLRE 347

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           A   F  L   N VP VVTY  L+DGLC+ GDL  A+ +   M+ + + P+V+TY+ M+N
Sbjct: 348 AEKTFKMLLEDNEVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMIN 407

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
           G  K G L  A     +M  + + P+ F Y T I G  K G    A  + +EM   G   
Sbjct: 408 GYVKKGMLEEAVSLMRKMEDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIGVEE 467

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           +    + LV+ L ++G ++E   L++ MV  G   DHI YTS+I    + GD        
Sbjct: 468 NNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWA 527

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
             M  K +   +V+Y VLI      G++   + Y   M+ KGI P++ T+N ++N   + 
Sbjct: 528 EEMQEKEMPWDVVSYNVLISGLLKFGKVGADWAY-KGMREKGIEPDIATFNIMMNSQRKQ 586

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
              +    L+  M+  GI P+     I++   C  G  +EA+ +  +M+  EI P+  T+
Sbjct: 587 GDFEGILKLWDKMKSCGIKPSLMICNIVVGMLCEKGKMKEAIDILDQMMFMEIHPNLTTY 646

Query: 702 SALL-----LKQLDKDYKVH 716
              L      K+ D  +K H
Sbjct: 647 RIFLDMSSKHKRADAIFKTH 666



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 139/515 (26%), Positives = 259/515 (50%), Gaps = 4/515 (0%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
           F  +L +  +P+V     ++  L   G    A  +   M E  + P++VTY++M++ + K
Sbjct: 352 FKMLLEDNEVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVK 411

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
           +G ++EA+ L+ +M+ +   PNG TY  +I G  + G+ E A  + ++M  +G++ + + 
Sbjct: 412 KGMLEEAVSLMRKMEDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIGVEENNYI 471

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
            + ++      G + E   L ++MV++GV      Y  LI    K G    A     EM 
Sbjct: 472 LDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQ 531

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
            K +  D++SYN L+ G  + G +G A   +  +R + + P + T+N +++   + GD E
Sbjct: 532 EKEMPWDVVSYNVLISGLLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDFE 590

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
              +L + M + GI P ++   I+V   C+ G +  A +  ++M+   + P+   Y   +
Sbjct: 591 GILKLWDKMKSCGIKPSLMICNIVVGMLCEKGKMKEAIDILDQMMFMEIHPNLTTYRIFL 650

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
               K       ++  E +L+ G       YN L+  LCKLG   +A  ++  M   GF+
Sbjct: 651 DMSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTRKAAMVMEDMEARGFV 710

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           PD +T+ +++H       + +    ++ M+  G+SP + TY  +I   +  G ++    +
Sbjct: 711 PDTVTFNALMHGYFVGSHVGKALSTYSMMMEAGISPNVATYNTIIRGLSDAGLIKEVEKW 770

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
            SEM+ +G+RP+  TYNALI+G  ++    ++  ++ +M  +G++P   TY +LI+E   
Sbjct: 771 LSEMKSRGMRPDDFTYNALISGQAKIGNKKESMTIYCEMIADGLVPKTSTYNVLISEFAK 830

Query: 676 AGNWQEALRLYKEMLDREIEPD---YCTHSALLLK 707
            G   +A  L KEM  R + P+   YCT  + L K
Sbjct: 831 VGKMLQATELMKEMGKRRVSPNTSTYCTMISGLCK 865



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 148/546 (27%), Positives = 259/546 (47%), Gaps = 29/546 (5%)

Query: 188 MVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAR------------------- 228
           + ++     ++M++ G+LPD  + N +I      G   +A+                   
Sbjct: 176 LADEAYQFLSEMVKIGILPDTVSFNTLIDGFCKVGNFARAKALVDEISELNLITHTILIS 235

Query: 229 ---------EVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGV 279
                    E YR M   G  P +VT++++++  CK+G++ E   LL EM+  G  PN V
Sbjct: 236 SYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKDGKVMEGGLLLREMEEMGVYPNHV 295

Query: 280 TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
           TY  L+    +  +   A  L   M+  G+ V    Y  ++ G  + G L EA    + +
Sbjct: 296 TYTTLVDSLFKAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGDLREAEKTFKML 355

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
           +     P + TY  L+ GLCK G +S A     +ML K+V P++++Y++++ GY + G +
Sbjct: 356 LEDNEVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGML 415

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
            EA  L  ++  +N+VP   TY T+IDGL + G  EVA ++ + M   G+  +      +
Sbjct: 416 EEAVSLMRKMEDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIGVEENNYILDAL 475

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           VN   ++G +   +    +M+ KG+  D   YT+ I    K GD   A    EEM  K  
Sbjct: 476 VNHLKRIGRIKEVKGLVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQEKEM 535

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
           P D+++YNVL+ GL K G +  A+   + M   G  PD  T+  ++++  + GD      
Sbjct: 536 PWDVVSYNVLISGLLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDFEGILK 594

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
           L++ M   G+ P+L+   +++     +G+++ A     +M    I PN+ TY   ++   
Sbjct: 595 LWDKMKSCGIKPSLMICNIVVGMLCEKGKMKEAIDILDQMMFMEIHPNLTTYRIFLDMSS 654

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
           + +R D  +     +   GI  ++  Y  LI   C  G  ++A  + ++M  R   PD  
Sbjct: 655 KHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTRKAAMVMEDMEARGFVPDTV 714

Query: 700 THSALL 705
           T +AL+
Sbjct: 715 TFNALM 720



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 155/581 (26%), Positives = 257/581 (44%), Gaps = 71/581 (12%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
            +  M+ +G  PDV   + II  L  +G  ++   + R M E G+ P+ VTY T++DS  
Sbjct: 246 AYRDMVMSGFDPDVVTFSSIINRLCKDGKVMEGGLLLREMEEMGVYPNHVTYTTLVDSLF 305

Query: 255 KEGEMQEALELLWEMQGRGCS-----------------------------------PNGV 279
           K  + + AL L  +M  RG                                     PN V
Sbjct: 306 KAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGDLREAEKTFKMLLEDNEVPNVV 365

Query: 280 TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
           TY  L+ G  + G+L  A  +I  ML+  +  +  +Y+ +I GY +KG+L EA++L  +M
Sbjct: 366 TYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKM 425

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
             + V P   TY  +I GL K G+   A     EM    V  +    + L+    R G I
Sbjct: 426 EDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIGVEENNYILDALVNHLKRIGRI 485

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
            E   L  ++ S+ +    + Y +LID   + GD E A    E M  + +  DV++Y ++
Sbjct: 486 KEVKGLVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQEKEMPWDVVSYNVL 545

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           ++G  K G +  A   +  M  KG++PD   +   +  + K GD     +L ++M + G 
Sbjct: 546 ISGLLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDFEGILKLWDKMKSCGI 604

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMV-----------------------GDGFIP 556
            P L+  N++V  LC+ G ++EA ++L +M+                        D    
Sbjct: 605 KPSLMICNIVVGMLCEKGKMKEAIDILDQMMFMEIHPNLTTYRIFLDMSSKHKRADAIFK 664

Query: 557 DHIT------------YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
            H T            Y ++I    ++G  R+   +  +M  +G  P  VT+  L+H + 
Sbjct: 665 THETLLSYGIKLSRQVYNTLIATLCKLGMTRKAAMVMEDMEARGFVPDTVTFNALMHGYF 724

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
               +  A   +S M   GI PNV TYN +I GL     I +      +M+  G+ P+ +
Sbjct: 725 VGSHVGKALSTYSMMMEAGISPNVATYNTIIRGLSDAGLIKEVEKWLSEMKSRGMRPDDF 784

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           TY  LI+     GN +E++ +Y EM+   + P   T++ L+
Sbjct: 785 TYNALISGQAKIGNKKESMTIYCEMIADGLVPKTSTYNVLI 825



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 127/444 (28%), Positives = 218/444 (49%), Gaps = 34/444 (7%)

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL-EEEMVTRGVAPTLAT 350
           G L  A   +  M   G+      +N +I  ++  GL+ + ++L   +M+  GV+P +  
Sbjct: 72  GRLYGAARTLSAMCTFGVVPDLCLWNSLIHQFNVNGLVHDQVSLVYSKMIACGVSPDVFA 131

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIP-DIISYNTLLYGYCRSGNIGEAFLLFDEL 409
            N+LI+ LCK G++S A      +LR  VI  D ++YNT++ G C  G   EA+    E+
Sbjct: 132 LNVLIHSLCKVGQLSFA----ISLLRNRVISVDTVTYNTVISGLCEHGLADEAYQFLSEM 187

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE--------------------------- 442
               ++P  V++NTLIDG C+ G+   A+ L +                           
Sbjct: 188 VKIGILPDTVSFNTLIDGFCKVGNFARAKALVDEISELNLITHTILISSYYNLHAIEEAY 247

Query: 443 -NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
            +M+  G  PDV+T++ ++N  CK G +        EM   G+ P+   YTT +    K 
Sbjct: 248 RDMVMSGFDPDVVTFSSIINRLCKDGKVMEGGLLLREMEEMGVYPNHVTYTTLVDSLFKA 307

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
            D   A  L  +M+ +G P DL+ Y VL+ GL K G L EA +  + ++ D  +P+ +TY
Sbjct: 308 KDYRHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGDLREAEKTFKMLLEDNEVPNVVTY 367

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
           T+++    + GDL     +   ML K + P +VTY+ +I+ +  +G LE A     +M+ 
Sbjct: 368 TALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKMED 427

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
           + + PN  TY  +I+GL +  + + A  +  +M   G+  N Y    L+N     G  +E
Sbjct: 428 QNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIGVEENNYILDALVNHLKRIGRIKE 487

Query: 682 ALRLYKEMLDREIEPDYCTHSALL 705
              L K+M+ + +  D+  +++L+
Sbjct: 488 VKGLVKDMVSKGVTLDHINYTSLI 511



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 128/542 (23%), Positives = 228/542 (42%), Gaps = 47/542 (8%)

Query: 194 LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
            +  +ML   + P+V   + +I      G   +A  + R M +  + P+  TY T++D  
Sbjct: 385 FIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKMEDQNVVPNGFTYGTVIDGL 444

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
            K G+ + A E+  EM+  G   N    + L+    R G +++ +GL++DM+  G+ +  
Sbjct: 445 FKAGKQEVASEMSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDH 504

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTR------------------------------- 342
            +Y  +I  + + G    AL+  EEM  +                               
Sbjct: 505 INYTSLIDVFFKGGDEEAALSWAEEMQEKEMPWDVVSYNVLISGLLKFGKVGADWAYKGM 564

Query: 343 ---GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
              G+ P +AT+NI++    K G        + +M    + P ++  N ++   C  G +
Sbjct: 565 REKGIEPDIATFNIMMNSQRKQGDFEGILKLWDKMKSCGIKPSLMICNIVVGMLCEKGKM 624

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
            EA  + D++    + P + TY   +D   ++   +   +  E +++ GI      Y  +
Sbjct: 625 KEAIDILDQMMFMEIHPNLTTYRIFLDMSSKHKRADAIFKTHETLLSYGIKLSRQVYNTL 684

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           +   CK+G    A     +M  +G  PD   +   + G        +A      M+  G 
Sbjct: 685 IATLCKLGMTRKAAMVMEDMEARGFVPDTVTFNALMHGYFVGSHVGKALSTYSMMMEAGI 744

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
            P++ TYN ++ GL   G ++E  + L +M   G  PD  TY ++I    ++G+ +    
Sbjct: 745 SPNVATYNTIIRGLSDAGLIKEVEKWLSEMKSRGMRPDDFTYNALISGQAKIGNKKESMT 804

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
           ++  M+  GL P   TY VLI   A  G++  A     EM  + + PN  TY  +I+GLC
Sbjct: 805 IYCEMIADGLVPKTSTYNVLISEFAKVGKMLQATELMKEMGKRRVSPNTSTYCTMISGLC 864

Query: 640 RL------------RRIDQAYGLFIDM-EEEGILPNKYTYTILINENCNAGNWQEALRLY 686
           +L              + +A GL  +M EE+G +P   T   +       G   +A R  
Sbjct: 865 KLCTHPEVEWNKKAMYLAEAKGLLKEMIEEKGYIPYNQTIYWISAAFSKPGMKVDAERFL 924

Query: 687 KE 688
           KE
Sbjct: 925 KE 926



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/293 (23%), Positives = 124/293 (42%), Gaps = 83/293 (28%)

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITY-------------------------------- 526
           L  G    A R    M   G  PDL  +                                
Sbjct: 69  LSCGRLYGAARTLSAMCTFGVVPDLCLWNSLIHQFNVNGLVHDQVSLVYSKMIACGVSPD 128

Query: 527 ----NVLVHGLCKLGSL--------------------------------EEANELLRKMV 550
               NVL+H LCK+G L                                +EA + L +MV
Sbjct: 129 VFALNVLIHSLCKVGQLSFAISLLRNRVISVDTVTYNTVISGLCEHGLADEAYQFLSEMV 188

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
             G +PD +++ ++I    ++G+  R + L + +        L+T+T+LI ++     +E
Sbjct: 189 KIGILPDTVSFNTLIDGFCKVGNFARAKALVDEISE----LNLITHTILISSYYNLHAIE 244

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
            A   + +M + G  P+V+T++++IN LC+  ++ +   L  +MEE G+ PN  TYT L+
Sbjct: 245 EA---YRDMVMSGFDPDVVTFSSIINRLCKDGKVMEGGLLLREMEEMGVYPNHVTYTTLV 301

Query: 671 NENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL--------LKQLDKDYKV 715
           +    A +++ AL LY +M+ R I  D   ++ L+        L++ +K +K+
Sbjct: 302 DSLFKAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGDLREAEKTFKM 354


>gi|242055653|ref|XP_002456972.1| hypothetical protein SORBIDRAFT_03g046570 [Sorghum bicolor]
 gi|241928947|gb|EES02092.1| hypothetical protein SORBIDRAFT_03g046570 [Sorghum bicolor]
          Length = 821

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 161/588 (27%), Positives = 281/588 (47%), Gaps = 65/588 (11%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI----- 243
            ++   V+  M+  G+  DV+  +  I  L D G   K    Y M+  + +   I     
Sbjct: 239 ADEAFRVWVGMIEMGVKLDVQGYSSFIIGLCDCG---KYDLAYNMVRRYAVLQEISQERV 295

Query: 244 ----VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
                 YN ++D  CKE +++EA ++L      G +P+   Y+ LI    + G LE+A  
Sbjct: 296 PIEAFAYNMVIDGLCKEMKLEEAEKVLEIKTRHGSTPDLYGYSYLIHSHCKMGNLEKAWY 355

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
            I DM+  G++++ H    ++    + G++ E +   ++    G+      YN+ +   C
Sbjct: 356 HIEDMVSHGIEINCHIVGSLLQCLRKLGMISEVIVHFQKFRDLGLHLDGVLYNVAMDAYC 415

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
           K G +++A     EM+   ++PD I Y  L+ GYC  G    A+ +F+++   N+ P VV
Sbjct: 416 KLGNMNEAVKLLNEMMAGGLVPDKIHYTCLINGYCLKGETENAWQVFEQMLKANIKPDVV 475

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
           TYN L  G  R G +     L E+M++QG+ P+ +TY I + G C+ GNLS A   FN +
Sbjct: 476 TYNILSSGYSRNGLVMKVFDLLEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIV 535

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
             KG+      Y++ + G L  G T  AY L   +  +G   D ++ + L++GLC+   +
Sbjct: 536 EEKGIDNIDVLYSSMVCGYLHSGWTDHAYMLFLRVAKQGNMVDHLSCSKLINGLCRDEKV 595

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           +EA+ +   M+    +P  I+Y+ +I A  +  D+R     F++M+ +GLS  +  YT+L
Sbjct: 596 QEASTVCSMMLEKNVVPHVISYSKLISAYCQSRDMRNAHLWFHDMVERGLSD-VTAYTIL 654

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING---------------------- 637
           ++ +   G+L+ A   F +M   GI+P+V+ Y  L++G                      
Sbjct: 655 MNGYCKVGQLQEACELFVQMVNLGIKPDVVAYTVLLDGHLKETLQQGWQGIAKERRTFFL 714

Query: 638 -----------------------------LCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
                                         C+   +++A GLF +M  +G+ P+   YT 
Sbjct: 715 RTKHKVLLSSMKEMEIEPDVTCYTVLIYGQCKAEYLEEARGLFDEMLAKGLTPDVDAYTT 774

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVH 716
           LIN  C+ G   +A  L++EM+D+ ++PD  + S L  + L +  KVH
Sbjct: 775 LINGYCSQGEIAKAEDLFQEMIDKGMKPDVLSFSVLHQRTL-RHRKVH 821



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 143/482 (29%), Positives = 233/482 (48%), Gaps = 55/482 (11%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  + K   +E+       M+ +G+  +      +++ LR  G   +    ++   + G
Sbjct: 340 LIHSHCKMGNLEKAWYHIEDMVSHGIEINCHIVGSLLQCLRKLGMISEVIVHFQKFRDLG 399

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           +    V YN  +D++CK G M EA++LL EM   G  P+ + Y  LI G+   GE E A 
Sbjct: 400 LHLDGVLYNVAMDAYCKLGNMNEAVKLLNEMMAGGLVPDKIHYTCLINGYCLKGETENAW 459

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            +   MLK  +K    +YN +  GYS  GL+++  +L E M+ +G+ P   TY I I G 
Sbjct: 460 QVFEQMLKANIKPDVVTYNILSSGYSRNGLVMKVFDLLEHMMDQGLEPNSLTYGIAIAGF 519

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDI-ISYNTLLYGYCRSGNIGEAFLLF----------- 406
           C+ G +S+A    F ++ +  I +I + Y++++ GY  SG    A++LF           
Sbjct: 520 CRGGNLSEAE-VLFNIVEEKGIDNIDVLYSSMVCGYLHSGWTDHAYMLFLRVAKQGNMVD 578

Query: 407 -------------DE-----------LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
                        DE           +  +N+VP V++Y+ LI   C+  D+  A     
Sbjct: 579 HLSCSKLINGLCRDEKVQEASTVCSMMLEKNVVPHVISYSKLISAYCQSRDMRNAHLWFH 638

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK-- 500
           +M+ +G L DV  YTI++NG CK+G L  A E F +M+  G++PD  AYT  + G LK  
Sbjct: 639 DMVERG-LSDVTAYTILMNGYCKVGQLQEACELFVQMVNLGIKPDVVAYTVLLDGHLKET 697

Query: 501 -------LGDTSEAYRLQEE-------MLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
                  +      + L+ +       M      PD+  Y VL++G CK   LEEA  L 
Sbjct: 698 LQQGWQGIAKERRTFFLRTKHKVLLSSMKEMEIEPDVTCYTVLIYGQCKAEYLEEARGLF 757

Query: 547 RKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAAR 606
            +M+  G  PD   YT++I+     G++ +  DLF  M+ KG+ P +++++VL H    R
Sbjct: 758 DEMLAKGLTPDVDAYTTLINGYCSQGEIAKAEDLFQEMIDKGMKPDVLSFSVL-HQRTLR 816

Query: 607 GR 608
            R
Sbjct: 817 HR 818



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 163/626 (26%), Positives = 285/626 (45%), Gaps = 16/626 (2%)

Query: 93  LVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIES---GLLRSAYWVVET 149
           +V  L  +R KP +A  +F+   +  G   D   +  I++IL  S    +L S +  + +
Sbjct: 68  VVHTLRYLRRKPAVAFAYFKDTHS-LGFHHDFSTYSEIIQILSHSFQGKMLVSLFCEILS 126

Query: 150 VVCVNMHGILDVLIGGGLSSCVSIKIL----DLLLLIYTKKSMVEQCLLVFNKMLRNGLL 205
                   IL  LI     +C +  +L    + L+  YT     ++ + +F  + R G +
Sbjct: 127 GTDSGGPEIL-ALIDHLRKTCATSHVLSYAVNCLIKAYTTCHDAQETVDMFCHLCRLGFV 185

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P +  CN ++K +  +  S      Y  M  F +     + N +  S  +  +  EA  +
Sbjct: 186 PTLWACNFLLKFVSQSSDSHMVVAAYDRMKCFQLTLDAQSLNIVTRSLFQANKADEAFRV 245

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR------DMLKLGLKVSAHSYNPI 319
              M   G   +   Y+  I G    G+ + A  ++R      ++ +  + + A +YN +
Sbjct: 246 WVGMIEMGVKLDVQGYSSFIIGLCDCGKYDLAYNMVRRYAVLQEISQERVPIEAFAYNMV 305

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           I G  ++  L EA  + E     G  P L  Y+ LI+  CK G +  A +   +M+   +
Sbjct: 306 IDGLCKEMKLEEAEKVLEIKTRHGSTPDLYGYSYLIHSHCKMGNLEKAWYHIEDMVSHGI 365

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
             +     +LL    + G I E  + F + R   L    V YN  +D  C+ G++  A +
Sbjct: 366 EINCHIVGSLLQCLRKLGMISEVIVHFQKFRDLGLHLDGVLYNVAMDAYCKLGNMNEAVK 425

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           L   M+  G++PD I YT ++NG C  G    A + F +ML+  ++PD   Y    +G  
Sbjct: 426 LLNEMMAGGLVPDKIHYTCLINGYCLKGETENAWQVFEQMLKANIKPDVVTYNILSSGYS 485

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           + G   + + L E M+ +G  P+ +TY + + G C+ G+L EA  L   +   G     +
Sbjct: 486 RNGLVMKVFDLLEHMMDQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEEKGIDNIDV 545

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
            Y+S++   L  G       LF  + ++G     ++ + LI+      +++ A    S M
Sbjct: 546 LYSSMVCGYLHSGWTDHAYMLFLRVAKQGNMVDHLSCSKLINGLCRDEKVQEASTVCSMM 605

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
             K + P+VI+Y+ LI+  C+ R +  A+  F DM E G L +   YTIL+N  C  G  
Sbjct: 606 LEKNVVPHVISYSKLISAYCQSRDMRNAHLWFHDMVERG-LSDVTAYTILMNGYCKVGQL 664

Query: 680 QEALRLYKEMLDREIEPDYCTHSALL 705
           QEA  L+ +M++  I+PD   ++ LL
Sbjct: 665 QEACELFVQMVNLGIKPDVVAYTVLL 690



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 140/491 (28%), Positives = 224/491 (45%), Gaps = 79/491 (16%)

Query: 114 VETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGI-LDVLIGGGLSSCVS 172
           ++T+ G   D + +  ++    + G L  A++ +E +V    HGI ++  I G L  C+ 
Sbjct: 324 IKTRHGSTPDLYGYSYLIHSHCKMGNLEKAWYHIEDMVS---HGIEINCHIVGSLLQCLR 380

Query: 173 I------------KILDLLLLI-----------YTKKSMVEQCLLVFNKMLRNGLLPDVK 209
                        K  DL L +           Y K   + + + + N+M+  GL+PD  
Sbjct: 381 KLGMISEVIVHFQKFRDLGLHLDGVLYNVAMDAYCKLGNMNEAVKLLNEMMAGGLVPDKI 440

Query: 210 NCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM 269
           +   +I      G +  A +V+  M +  IKP +VTYN +   + + G + +  +LL  M
Sbjct: 441 HYTCLINGYCLKGETENAWQVFEQMLKANIKPDVVTYNILSSGYSRNGLVMKVFDLLEHM 500

Query: 270 QGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLL 329
             +G  PN +TY + I GF R G L +A  L   + + G+      Y+ ++CGY   G  
Sbjct: 501 MDQGLEPNSLTYGIAIAGFCRGGNLSEAEVLFNIVEEKGIDNIDVLYSSMVCGYLHSGWT 560

Query: 330 VEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTL 389
             A  L   +  +G      + + LI GLC+  +V +A      ML KNV+P +ISY+ L
Sbjct: 561 DHAYMLFLRVAKQGNMVDHLSCSKLINGLCRDEKVQEASTVCSMMLEKNVVPHVISYSKL 620

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
           +  YC+S ++  A L F ++  R L   V  Y  L++G C+ G L+ A +L   M+N GI
Sbjct: 621 ISAYCQSRDMRNAHLWFHDMVERGL-SDVTAYTILMNGYCKVGQLQEACELFVQMVNLGI 679

Query: 450 LPDVITYTIMVNG----------------------------------------------- 462
            PDV+ YT++++G                                               
Sbjct: 680 KPDVVAYTVLLDGHLKETLQQGWQGIAKERRTFFLRTKHKVLLSSMKEMEIEPDVTCYTV 739

Query: 463 ----SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
                CK   L  AR  F+EML KGL PD  AYTT I G    G+ ++A  L +EM+ KG
Sbjct: 740 LIYGQCKAEYLEEARGLFDEMLAKGLTPDVDAYTTLINGYCSQGEIAKAEDLFQEMIDKG 799

Query: 519 FPPDLITYNVL 529
             PD+++++VL
Sbjct: 800 MKPDVLSFSVL 810



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/413 (24%), Positives = 183/413 (44%), Gaps = 6/413 (1%)

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
           V +++ N +I  Y+      E +++   +   G  PTL   N L+  + +          
Sbjct: 151 VLSYAVNCLIKAYTTCHDAQETVDMFCHLCRLGFVPTLWACNFLLKFVSQSSDSHMVVAA 210

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
           +  M    +  D  S N +     ++    EAF ++  +    +   V  Y++ I GLC 
Sbjct: 211 YDRMKCFQLTLDAQSLNIVTRSLFQANKADEAFRVWVGMIEMGVKLDVQGYSSFIIGLCD 270

Query: 431 YGDLEVAQQLKENM-----INQGILP-DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
            G  ++A  +         I+Q  +P +   Y ++++G CK   L  A +      R G 
Sbjct: 271 CGKYDLAYNMVRRYAVLQEISQERVPIEAFAYNMVIDGLCKEMKLEEAEKVLEIKTRHGS 330

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            PD + Y+  I    K+G+  +A+   E+M++ G   +      L+  L KLG + E   
Sbjct: 331 TPDLYGYSYLIHSHCKMGNLEKAWYHIEDMVSHGIEINCHIVGSLLQCLRKLGMISEVIV 390

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
             +K    G   D + Y   + A  ++G++     L N M+  GL P  + YT LI+ + 
Sbjct: 391 HFQKFRDLGLHLDGVLYNVAMDAYCKLGNMNEAVKLLNEMMAGGLVPDKIHYTCLINGYC 450

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
            +G  E A+  F +M    I+P+V+TYN L +G  R   + + + L   M ++G+ PN  
Sbjct: 451 LKGETENAWQVFEQMLKANIKPDVVTYNILSSGYSRNGLVMKVFDLLEHMMDQGLEPNSL 510

Query: 665 TYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHA 717
           TY I I   C  GN  EA  L+  + ++ I+     +S+++   L   +  HA
Sbjct: 511 TYGIAIAGFCRGGNLSEAEVLFNIVEEKGIDNIDVLYSSMVCGYLHSGWTDHA 563


>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 512

 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 139/441 (31%), Positives = 230/441 (52%), Gaps = 8/441 (1%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PSI+ +  +L S  K       + L  +M+  G + N VT ++LI  FS+ G    +  +
Sbjct: 67  PSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSV 126

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
             ++LK G +  A +   +I G   KG + +AL+  ++++  G      +Y  LI GLCK
Sbjct: 127 FSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCK 186

Query: 361 WGRVSDARHRFFEMLR----KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
            G+   A     EMLR    K V  D++ YNT++ G C+   + +AF  + E+ ++ + P
Sbjct: 187 VGQTKAA----LEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICP 242

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
           TVVTYNTLI GLC  G L+ A  L   MI + I P V T++I+V+  CK G +  A+  F
Sbjct: 243 TVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVF 302

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
             M++K ++P+   Y + + G   + + ++A  +   M   G  PD+ +Y++++ G CK+
Sbjct: 303 VVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKI 362

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
             ++EA +L  +M      PD +TY S+I    + G +     L   M  +G  P ++TY
Sbjct: 363 KMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITY 422

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
             L+ A      ++ A    ++++   I+P+V TYN LINGLC+  R+  A  +F D+  
Sbjct: 423 NSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLV 482

Query: 657 EGILPNKYTYTILINENCNAG 677
            G   + YTY  +I   C  G
Sbjct: 483 NGYNIDVYTYNTMIKGFCKKG 503



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 132/447 (29%), Positives = 237/447 (53%), Gaps = 3/447 (0%)

Query: 196 FNKML-RNGLLPDVKNCNRII-KVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
           FN +L +    P +    +I+  +++ N +S+    ++R M   GI  ++VT + +++ F
Sbjct: 56  FNHLLHQKNPTPSIIQFGKILGSLVKANHYSI-VVSLHRQMEFNGIASNLVTLSILINCF 114

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
            + G    +  +   +  +G  P+ +T   LI G    G++ +A      +L LG +++ 
Sbjct: 115 SQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQ 174

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
            SY  +I G  + G    AL +   +  + V   +  YN +I G+CK   V+DA   + E
Sbjct: 175 VSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSE 234

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M+ K + P +++YNTL+ G C  G + +A  L  ++   N+ PTV T++ L+D  C+ G 
Sbjct: 235 MVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGK 294

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           ++ A+ +   M+ + + P+++TY  ++NG C +  ++ A   FN M + G+ PD  +Y+ 
Sbjct: 295 VKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSI 354

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            I+G  K+    EA +L EEM  K   PD++TYN L+ GLCK G +  A +L+ +M   G
Sbjct: 355 MISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRG 414

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
             P+ ITY S++ A  +   + +  +L   +    + P++ TY +LI+     GRL+ A 
Sbjct: 415 QPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQ 474

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCR 640
             F ++ V G   +V TYN +I G C+
Sbjct: 475 KVFEDVLVNGYNIDVYTYNTMIKGFCK 501



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 122/410 (29%), Positives = 218/410 (53%)

Query: 198 KMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG 257
           +M  NG+  ++   + +I      G +  +  V+  + + G +P  +T  T++   C +G
Sbjct: 94  QMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKG 153

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
           ++ +AL    ++   G   N V+Y  LI G  + G+ + A  ++R +    +++    YN
Sbjct: 154 DIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYN 213

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            II G  +  L+ +A +   EMV + + PT+ TYN LI GLC  G++ DA     +M+ +
Sbjct: 214 TIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILE 273

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
           N+ P + +++ L+  +C+ G + EA  +F  +  +++ P +VTYN+L++G C   ++  A
Sbjct: 274 NINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKA 333

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
           + +   M   G+ PDV +Y+IM++G CK+  +  A + F EM  K + PD   Y + I G
Sbjct: 334 ESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDG 393

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
             K G  S A +L  EM  +G PP++ITYN L+  LCK   +++A ELL K+      P 
Sbjct: 394 LCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPS 453

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
             TY  +I+   + G L+  + +F ++L  G +  + TY  +I     +G
Sbjct: 454 VCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKG 503



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 204/378 (53%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           VF+ +L+ G  PD      +IK L   G   KA   +  +   G + + V+Y T+++  C
Sbjct: 126 VFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLC 185

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K G+ + ALE+L  + G+    + V YN +I G  ++  +  A     +M+   +  +  
Sbjct: 186 KVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVV 245

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +YN +ICG    G L +A+ L  +M+   + PT+ T++IL+   CK G+V +A++ F  M
Sbjct: 246 TYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVM 305

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           ++K+V P+I++YN+L+ GYC    + +A  +F+ +    + P V +Y+ +I G C+   +
Sbjct: 306 MKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMV 365

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A +L E M  + I PDV+TY  +++G CK G +S A +   EM  +G  P+   Y + 
Sbjct: 366 DEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSL 425

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           +    K     +A  L  ++      P + TYN+L++GLCK G L++A ++   ++ +G+
Sbjct: 426 LDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGY 485

Query: 555 IPDHITYTSIIHASLEMG 572
             D  TY ++I    + G
Sbjct: 486 NIDVYTYNTMIKGFCKKG 503



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 116/385 (30%), Positives = 204/385 (52%), Gaps = 6/385 (1%)

Query: 327 GLLVEA------LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
           G LV+A      ++L  +M   G+A  L T +ILI    + G  S +   F  +L+K   
Sbjct: 77  GSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYE 136

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           PD I+  TL+ G C  G+I +A    D++ +       V+Y TLI+GLC+ G  + A ++
Sbjct: 137 PDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEM 196

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
              +  + +  DV+ Y  +++G CK   ++ A +F++EM+ K + P    Y T I G   
Sbjct: 197 LRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCI 256

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
           +G   +A  L  +M+ +   P + T+++LV   CK G ++EA  +   M+     P+ +T
Sbjct: 257 MGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVT 316

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQ 620
           Y S+++    + ++ +   +FN M + G++P + +Y+++I        ++ A   F EM 
Sbjct: 317 YNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMH 376

Query: 621 VKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ 680
            K I P+V+TYN+LI+GLC+  RI  A  L  +M + G  PN  TY  L++  C   +  
Sbjct: 377 CKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVD 436

Query: 681 EALRLYKEMLDREIEPDYCTHSALL 705
           +A+ L  ++ D  I+P  CT++ L+
Sbjct: 437 KAIELLTKLKDHNIQPSVCTYNILI 461



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 207/403 (51%), Gaps = 4/403 (0%)

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
           YS+   LV + N    +  +   P++  +  ++  L K    S       +M    +  +
Sbjct: 46  YSQLHNLVSSFN--HLLHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASN 103

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
           +++ + L+  + + G+   +F +F  +  +   P  +T  TLI GLC  GD+  A    +
Sbjct: 104 LVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHD 163

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            ++  G   + ++Y  ++NG CK+G    A E    +  K ++ D   Y T I G  K  
Sbjct: 164 KVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDK 223

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
             ++A+    EM+AK   P ++TYN L+ GLC +G L++A  LL KM+ +   P   T++
Sbjct: 224 LVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFS 283

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
            ++ A  + G ++  +++F  M++K + P +VTY  L++ +     +  A   F+ M   
Sbjct: 284 ILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQI 343

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
           G+ P+V +Y+ +I+G C+++ +D+A  LF +M  + I P+  TY  LI+  C +G    A
Sbjct: 344 GVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYA 403

Query: 683 LRLYKEMLDREIEPDYCTHSALLLKQLDKDYKV-HAVEYLESL 724
           L+L  EM DR   P+  T+++ LL  L K++ V  A+E L  L
Sbjct: 404 LKLIGEMHDRGQPPNIITYNS-LLDALCKNHHVDKAIELLTKL 445



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 35/209 (16%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +FN M + G+ PDV + + +I          +A +++  M    I P +VTYN+++D  C
Sbjct: 336 IFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLC 395

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K G +  AL+L+ EM  RG  PN +TYN L+    +N  +++A       ++L  K+  H
Sbjct: 396 KSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKA-------IELLTKLKDH 448

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +  P +C                            TYNILI GLCK GR+ DA+  F ++
Sbjct: 449 NIQPSVC----------------------------TYNILINGLCKSGRLKDAQKVFEDV 480

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAF 403
           L      D+ +YNT++ G+C+ G +   F
Sbjct: 481 LVNGYNIDVYTYNTMIKGFCKKGFVIPQF 509



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 86/148 (58%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K  MV++ + +F +M    + PDV   N +I  L  +G    A ++   M + G  P+
Sbjct: 359 FCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPN 418

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           I+TYN++LD+ CK   + +A+ELL +++     P+  TYN+LI G  ++G L+ A+ +  
Sbjct: 419 IITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFE 478

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLV 330
           D+L  G  +  ++YN +I G+ +KG ++
Sbjct: 479 DVLVNGYNIDVYTYNTMIKGFCKKGFVI 506


>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
 gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
          Length = 532

 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 148/529 (27%), Positives = 254/529 (48%), Gaps = 25/529 (4%)

Query: 199 MLRNG---LLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
           M R G   + PD+     +I    D G           + + G++   V +  +L + C 
Sbjct: 1   MARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCA 60

Query: 256 EGEMQEALEL-LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           +    +A+ + L  M   GC+P+  +Y+ L+ G     + E+A  LI  M + G      
Sbjct: 61  KKRTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPD 120

Query: 315 --SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF 372
             SY+ +I G+ ++G + +A  L  +M+  G+ P + T N +I GLCK   +  A     
Sbjct: 121 VVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQ 180

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
           +M+ ++++P+  +YN+L++GY  SG   EA  +  E+      P VVTYN LID LC+ G
Sbjct: 181 QMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSG 240

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
               A+++  +MI  G  PD  TY  +++G    GNL       + M++ G++ +   ++
Sbjct: 241 FHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFS 300

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
            +I    K G   EA     +M   GF PD++TY  ++ GLCK+G L++A     +M+ D
Sbjct: 301 IEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDD 360

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
           G  P+ IT+T++IH     G   +  +LF  M+ +G+ P +  +T +I      G++  A
Sbjct: 361 GLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEA 420

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT----- 667
              F  M   G +PNV++YN +I+G      + +   L  DM   G+ P   T+      
Sbjct: 421 QKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG 480

Query: 668 --------------ILINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
                          LI+  C  G  ++ L L++EML +  + D  T +
Sbjct: 481 MVSMGLKPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITEN 529



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 154/506 (30%), Positives = 249/506 (49%), Gaps = 20/506 (3%)

Query: 152 CVNM-HGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKN 210
           C+N+    L  +I  GL +  ++    LL  +  KK   +   +V  +M   G  PDV +
Sbjct: 28  CLNLGFAALGQIIKTGLRA-DAVAFTPLLRTLCAKKRTSDAMNIVLRRMPELGCTPDVFS 86

Query: 211 CNRIIKVLRDNGFSVKAREVYRMMGEFG--IKPSIVTYNTMLDSFCKEGEMQEALELLWE 268
            + ++K L       +A E+  MM E G    P +V+Y+T++  F KEG++ +A  L  +
Sbjct: 87  YSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCK 146

Query: 269 MQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
           M   G  PN VT N +I G  +   +++A  +++ M+   +  +  +YN +I GY   G 
Sbjct: 147 MLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQ 206

Query: 329 LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNT 388
             EA+ + +EM   G  P + TYN+LI  LCK G  ++AR  F  M++    PD  +Y +
Sbjct: 207 WTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGS 266

Query: 389 LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
           LL+GY   GN+ E   + D +    +     T++  I   C+ G L+ A      M   G
Sbjct: 267 LLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLG 326

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
            +PD++TYT +++G CK+G L  A   F +M+  GL P+   +TT I G    G   +A 
Sbjct: 327 FMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAE 386

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
            L  EM+ +G PPD+  +  ++  L K G + EA +L   M   G  P+ ++Y ++IH  
Sbjct: 387 ELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGY 446

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
              G++     L ++ML  GL PT VT+  L+                  M   G++P+V
Sbjct: 447 FIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG----------------MVSMGLKPDV 490

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDM 654
            T   LI+  C   RI+    LF +M
Sbjct: 491 DTCKTLIDSCCEDGRIEDILTLFREM 516



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/416 (32%), Positives = 216/416 (51%), Gaps = 16/416 (3%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K+  V +   +F KML +G+ P+V  CN +I  L       KA  V + M +  I P+
Sbjct: 131 FFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPN 190

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
             TYN+++  +   G+  EA+ +L EM   G  PN VTYN+LI    ++G   +AR +  
Sbjct: 191 CTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFN 250

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M++ G K  A +Y  ++ GY+ +G LVE  N+++ MV  G+     T++I IY  CK G
Sbjct: 251 SMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCG 310

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R+ +A   F +M +   +PDI++Y T++ G C+ G + +A   F ++    L P ++T+ 
Sbjct: 311 RLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFT 370

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           TLI G   YG  E A++L   M+++GI PDV  +T M++   K G ++ A++ F+ M R 
Sbjct: 371 TLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRA 430

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G +P+  +Y T I G    G+  E  +L ++ML  G  P  +T+N L+ G          
Sbjct: 431 GAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG---------- 480

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
                 MV  G  PD  T  ++I +  E G +     LF  ML K      +T  +
Sbjct: 481 ------MVSMGLKPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENI 530



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/469 (28%), Positives = 237/469 (50%), Gaps = 38/469 (8%)

Query: 275 SPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALN 334
           +P+  T+ +LI+     G L      +  ++K GL+  A ++ P++     K    +A+N
Sbjct: 10  APDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMN 69

Query: 335 LE-EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR--KNVIPDIISYNTLLY 391
           +    M   G  P + +Y+ L+ GLC   +  +A      M     N  PD++SY+T+++
Sbjct: 70  IVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIH 129

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL- 450
           G+ + G++G+A+ LF ++    + P VVT N++IDGLC+   ++ A+ + + MI++ I+ 
Sbjct: 130 GFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMP 189

Query: 451 ----------------------------------PDVITYTIMVNGSCKMGNLSMAREFF 476
                                             P+V+TY ++++  CK G  + ARE F
Sbjct: 190 NCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIF 249

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
           N M++ G +PD   Y + + G    G+  E   +++ M+  G   +  T+++ ++  CK 
Sbjct: 250 NSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKC 309

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G L+EA+    KM   GF+PD +TYT++I    ++G L      F  M+  GLSP ++T+
Sbjct: 310 GRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITF 369

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
           T LIH  +  G+ E A   F EM  +GI P+V  + A+I+ L +  ++ +A  LF  M  
Sbjct: 370 TTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPR 429

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            G  PN  +Y  +I+    AG   E ++L  +ML   ++P   T + LL
Sbjct: 430 AGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLL 478



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 134/421 (31%), Positives = 211/421 (50%), Gaps = 39/421 (9%)

Query: 342 RGVAPTLATYNILIYGLCKWG-----------------------------------RVSD 366
           + VAP +AT+ ILI   C  G                                   R SD
Sbjct: 7   KKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSD 66

Query: 367 ARHRFF-EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR--SRNLVPTVVTYNT 423
           A +     M      PD+ SY+TLL G C      EA  L   +     N  P VV+Y+T
Sbjct: 67  AMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYST 126

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           +I G  + GD+  A  L   M++ GI P+V+T   +++G CK+  +  A     +M+ + 
Sbjct: 127 VIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEH 186

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           + P+   Y + I G L  G  +EA R+ +EM   G  P+++TYN+L+  LCK G   EA 
Sbjct: 187 IMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAR 246

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
           E+   M+  G  PD  TY S++H     G+L    ++ + M++ G+     T+++ I+A+
Sbjct: 247 EIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAY 306

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
              GRL+ A + F +MQ  G  P+++TY  +I+GLC++ R+D A   F  M ++G+ PN 
Sbjct: 307 CKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNI 366

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLES 723
            T+T LI+     G W++A  L+ EM+DR I PD    +A ++ +L K+ KV   + L  
Sbjct: 367 ITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTA-MIDRLFKEGKVTEAQKLFD 425

Query: 724 L 724
           L
Sbjct: 426 L 426



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 9/216 (4%)

Query: 516 AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLR 575
           AK   PD+ T+ +L+   C  G L      L +++  G   D + +T ++     +   +
Sbjct: 6   AKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRT---LCAKK 62

Query: 576 RGRDLFNNMLRK----GLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG--IRPNVI 629
           R  D  N +LR+    G +P + +Y+ L+    A  + E A      M   G    P+V+
Sbjct: 63  RTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVV 122

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           +Y+ +I+G  +   + +AY LF  M + GI PN  T   +I+  C      +A  + ++M
Sbjct: 123 SYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQM 182

Query: 690 LDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
           +D  I P+  T+++L+   L       AV  L+ ++
Sbjct: 183 IDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMS 218


>gi|242058007|ref|XP_002458149.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
 gi|241930124|gb|EES03269.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
          Length = 795

 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 162/596 (27%), Positives = 270/596 (45%), Gaps = 41/596 (6%)

Query: 146 VVETVVCVNMHG----ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLR 201
           V+   V   MHG    + D + G G+     +  + +  L   + +  ++ + V  KM  
Sbjct: 194 VMRACVVGRMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDA--DRAVQVLGKMRE 251

Query: 202 NGLLPDVKNCNRIIKVLRDNGFSVKA-REVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQ 260
            GL P     N ++ VL   G   +A R   +M+   G K  +    T++  +C  GE+ 
Sbjct: 252 AGLKPRDFTYNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCLHGEIG 311

Query: 261 EALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII 320
           +AL+L  E    G +P  VTY VLI G    G  ++   L R M++ GL  S + +N +I
Sbjct: 312 KALDLFDEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVI 371

Query: 321 CGY----------------------------------SEKGLLVEALNLEEEMVTRGVAP 346
            G                                   S+   + EA+NL ++M   GV P
Sbjct: 372 KGLLRNKQWEDAIALFDLVVDTGVPDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKP 431

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
           ++ T + L+ G C+ G + +A   + EM  K   P+ ++Y TL+ GY +     +A+ L 
Sbjct: 432 SIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALL 491

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
           +E+    +     TYN LI+GLC    +    ++ +  +++G +P  +TY  ++NG  K 
Sbjct: 492 NEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSIINGFVKA 551

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G +  A   + +M  KG+ P+   YT+ I G  +      A +L   M   G  PD+  Y
Sbjct: 552 GMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMRCNGIHPDIAAY 611

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           N  ++  CK G++  A   L  ++ DG  P+   Y S +     +  +      + +M++
Sbjct: 612 NAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKMMAEASKFYYSMIK 671

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
           + ++     YT LI   +  G +  A   +SEM      P+  T+ AL +GLCR   ID 
Sbjct: 672 QRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLANHNIPDDKTFTALTHGLCRSGDIDG 731

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
           A  L  DM    + PN  TY +LIN +   G  QEA +L+ +ML   + PD  T++
Sbjct: 732 AKRLLDDMTRLDVCPNTVTYNMLINAHIRDGKLQEAFQLHDKMLSSGVVPDDTTYN 787



 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 147/528 (27%), Positives = 250/528 (47%), Gaps = 2/528 (0%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL+   + +     L +F++M   G   D K  + +++          A  ++  M   G
Sbjct: 159 LLVATARGASAADALTLFDEMRCKGYYADAKMYDVVMRACVVGRMHGDAVRLFDEMAGAG 218

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           +KP    Y   +   CK  +   A+++L +M+  G  P   TYN ++    + G +++A 
Sbjct: 219 VKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFTYNSVVDVLVKVGRMDEAL 278

Query: 299 GLIRDML-KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
            L   ML   G K+       ++ GY   G + +AL+L +E V  GV PT  TY +LI G
Sbjct: 279 RLKDQMLLATGKKMDVFLATTLMQGYCLHGEIGKALDLFDEAVRDGVTPTNVTYTVLIKG 338

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
               G   +      +M+ + ++P    +N ++ G  R+    +A  LFD L     VP 
Sbjct: 339 CDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQWEDAIALFD-LVVDTGVPD 397

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           V TY  LI  L ++  +  A  L + M   G+ P ++T   ++ G C+ G +  A + ++
Sbjct: 398 VFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYS 457

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           EM  KG  P+   YTT + G +K     +AY L  EM   G      TYN+L++GLC + 
Sbjct: 458 EMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVD 517

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            + E +E+L++ V +GF+P  +TY SII+  ++ G +     ++  M  KG++P +VTYT
Sbjct: 518 RVCEVDEMLKRFVSEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYT 577

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
             I  +      +LA      M+  GI P++  YNA IN  C+   +  A    + + ++
Sbjct: 578 SFIDGYCRTNCCDLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKD 637

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           G+ PN   Y   +    N     EA + Y  M+ + I  D   ++ L+
Sbjct: 638 GLTPNVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRIAADTEIYTTLI 685



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 155/567 (27%), Positives = 272/567 (47%), Gaps = 40/567 (7%)

Query: 89  DPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVE 148
           D +  V+VL ++RE                G+K  +F + +++++L++ G +  A  + +
Sbjct: 238 DADRAVQVLGKMREA---------------GLKPRDFTYNSVVDVLVKVGRMDEALRLKD 282

Query: 149 TVVCVNMHGILDVLIGGGLSSCVSI-----KILDLLL-----------LIYT-------K 185
            ++       +DV +   L     +     K LDL             + YT        
Sbjct: 283 QMLLATGKK-MDVFLATTLMQGYCLHGEIGKALDLFDEAVRDGVTPTNVTYTVLIKGCDA 341

Query: 186 KSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVT 245
           + M ++   +  +M+  GLLP     N +IK L  N     A  ++ ++ + G+ P + T
Sbjct: 342 EGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQWEDAIALFDLVVDTGV-PDVFT 400

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           Y  ++    K  ++ EA+ L  +M+  G  P+ VT + L+ G+   G +++A  L  +M 
Sbjct: 401 YGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMP 460

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
             G   +  +Y  ++ GY +K    +A  L  EM   GV+    TYNILI GLC   RV 
Sbjct: 461 GKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVC 520

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
           +        + +  +P  ++YN+++ G+ ++G +G A  ++ ++  + + P +VTY + I
Sbjct: 521 EVDEMLKRFVSEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFI 580

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           DG CR    ++A +L   M   GI PD+  Y   +N  CK GN+S A  F   +L+ GL 
Sbjct: 581 DGYCRTNCCDLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLT 640

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           P+   Y + + G   L   +EA +    M+ +    D   Y  L+ G  K+G++  A EL
Sbjct: 641 PNVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALEL 700

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
             +M+ +  IPD  T+T++ H     GD+   + L ++M R  + P  VTY +LI+AH  
Sbjct: 701 YSEMLANHNIPDDKTFTALTHGLCRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAHIR 760

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYN 632
            G+L+ AF    +M   G+ P+  TYN
Sbjct: 761 DGKLQEAFQLHDKMLSSGVVPDDTTYN 787



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/410 (30%), Positives = 210/410 (51%), Gaps = 1/410 (0%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           E  + +F+ ++  G+ PDV     +I  L  +    +A  ++  M E G+KPSIVT +++
Sbjct: 381 EDAIALFDLVVDTGV-PDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTCHSL 439

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           L  +C++G M EAL+L  EM G+G  PN VTY  L+ G+ +    ++A  L+ +M + G+
Sbjct: 440 LLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGV 499

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
               ++YN +I G      + E   + +  V+ G  PT  TYN +I G  K G +  A  
Sbjct: 500 SCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSIINGFVKAGMMGSALA 559

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
            + +M  K + P+I++Y + + GYCR+     A  L   +R   + P +  YN  I+  C
Sbjct: 560 MYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMRCNGIHPDIAAYNAFINMFC 619

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF 489
           + G++  A      ++  G+ P+V  Y   V G   +  ++ A +F+  M+++ +  D  
Sbjct: 620 KQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRIAADTE 679

Query: 490 AYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM 549
            YTT I G  K+G+ + A  L  EMLA    PD  T+  L HGLC+ G ++ A  LL  M
Sbjct: 680 IYTTLIDGFSKVGNVAFALELYSEMLANHNIPDDKTFTALTHGLCRSGDIDGAKRLLDDM 739

Query: 550 VGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
                 P+ +TY  +I+A +  G L+    L + ML  G+ P   TY + 
Sbjct: 740 TRLDVCPNTVTYNMLINAHIRDGKLQEAFQLHDKMLSSGVVPDDTTYNIF 789



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 141/528 (26%), Positives = 232/528 (43%), Gaps = 39/528 (7%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
           +++M+  G++PD K+   ++        +  A  ++  M   G       Y+ ++ + C 
Sbjct: 141 YSRMVTRGVVPDAKSRTDLLVATARGASAADALTLFDEMRCKGYYADAKMYDVVMRA-CV 199

Query: 256 EGEMQ-EALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
            G M  +A+ L  EM G G  P+   Y + ITG  +  + ++A  ++  M + GLK    
Sbjct: 200 VGRMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLK---- 255

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA-RHRFFE 373
                                          P   TYN ++  L K GR+ +A R +   
Sbjct: 256 -------------------------------PRDFTYNSVVDVLVKVGRMDEALRLKDQM 284

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           +L      D+    TL+ GYC  G IG+A  LFDE     + PT VTY  LI G    G 
Sbjct: 285 LLATGKKMDVFLATTLMQGYCLHGEIGKALDLFDEAVRDGVTPTNVTYTVLIKGCDAEGM 344

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
            +   +L   MI QG+LP    + +++ G  +      A   F+ ++  G+ PD F Y  
Sbjct: 345 TDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQWEDAIALFDLVVDTGV-PDVFTYGC 403

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            I    K     EA  L ++M   G  P ++T + L+ G C+ G ++EA +L  +M G G
Sbjct: 404 LIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKG 463

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
           F P+ +TYT+++   ++     +   L N M + G+S    TY +LI+      R+    
Sbjct: 464 FPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVD 523

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
                   +G  P  +TYN++ING  +   +  A  ++  M E+GI PN  TYT  I+  
Sbjct: 524 EMLKRFVSEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGY 583

Query: 674 CNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYL 721
           C       A++L   M    I PD   ++A +     +    HA+ +L
Sbjct: 584 CRTNCCDLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFL 631


>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
 gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
          Length = 789

 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 145/492 (29%), Positives = 233/492 (47%), Gaps = 17/492 (3%)

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
           +IKV    G + KA E +  M +F   P + TYN +LD   ++  +  AL +   M    
Sbjct: 132 LIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLN 191

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
           C PN  T+++LI G  ++G ++ A  L  +M + G+   A +Y  +I G      + +A 
Sbjct: 192 CLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAY 251

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH--RFFEMLRKNVIPDIISYNTLLY 391
            L ++M   GV P   T N L+ G C   RV +A    R FE  +   + D+  Y+ L+ 
Sbjct: 252 RLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFE--KDGYVLDVRGYSCLIR 309

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
           G  R+    +  LL+ ++   N+ P V  Y  ++ GL   G +  A +L   M   G++P
Sbjct: 310 GLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVP 369

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           D + Y +++ G C MG LS AR    E+ R    P+   Y+  I+G  + G T +A  + 
Sbjct: 370 DTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIF 429

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM-------------VGDGFIPDH 558
            EM   G  P  +T+N L+ GLCK G LE+A+ L  KM              G   + D 
Sbjct: 430 NEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDS 489

Query: 559 ITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE 618
            +   ++    + G + +   +   +   G +P + TY +L++     G    A+  F E
Sbjct: 490 ASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFRE 549

Query: 619 MQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGN 678
           MQ KG+ P+ +TY  LINGL R +R + AY +F  ME+ G  P+   Y  ++   C    
Sbjct: 550 MQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRME 609

Query: 679 WQEALRLYKEML 690
              A  L+ + L
Sbjct: 610 LPRAFSLWLKYL 621



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 156/569 (27%), Positives = 259/569 (45%), Gaps = 42/569 (7%)

Query: 104 PRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGI----- 158
           P++  RFF W       +  E   C ++  L+                 +N +G+     
Sbjct: 72  PQLGFRFFIWASNFKRFRAWES--CDLITDLL-----------------INQNGLELYCQ 112

Query: 159 -LDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
            L+ L  GG+   V      +L+ +Y K  + ++ +  F  M      PDV   N I+ V
Sbjct: 113 TLEALKNGGIK--VHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDV 170

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
           L    F + A  VY  M +    P++ T++ ++D  CK G +++AL L  EM  RG  P+
Sbjct: 171 LIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPD 230

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
             TY V+I+G  R+  ++ A  L   M   G+     + N ++ G+     + EA +L  
Sbjct: 231 AFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLR 290

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
                G    +  Y+ LI GL +  R  D +  + +M+  NV PD+  Y  ++ G   +G
Sbjct: 291 LFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAG 350

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
            + +A  L +E+    +VP  V YN LI G C  G L  A+ L+  +      P+V TY+
Sbjct: 351 KVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYS 410

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM--- 514
           I+++G C+ G    A+E FNEM + G  P    + + I G  K G   +A+ L  +M   
Sbjct: 411 ILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIG 470

Query: 515 --------LAKGFPP---DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
                   L++G P    D  +   +V  LC  G + +A  +L ++   G  P   TY  
Sbjct: 471 RNPSLFLRLSQG-PSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNI 529

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           +++   ++G+      LF  M  KGLSP  VTY  LI+      R E A+  F +M+  G
Sbjct: 530 LVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNG 589

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFI 652
             P+   Y  ++  +CR   + +A+ L++
Sbjct: 590 CTPDAAVYRTMMTWMCRRMELPRAFSLWL 618



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 135/464 (29%), Positives = 224/464 (48%), Gaps = 19/464 (4%)

Query: 260 QEALEL----LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
           Q  LEL    L  ++  G   +   + VLI  + + G  ++A      M         ++
Sbjct: 104 QNGLELYCQTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYT 163

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           YN I+    +K  L+ AL +   M+     P +AT++ILI GLCK G V DA H F EM 
Sbjct: 164 YNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMT 223

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
           ++ ++PD  +Y  ++ G CRS  + +A+ LFD+++   + P  VT N L++G C    ++
Sbjct: 224 QRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVD 283

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
            A  L       G + DV  Y+ ++ G  +       +  + +M+   ++PD + YT  +
Sbjct: 284 EAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMM 343

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
            G  + G   +A  L  EM   G  PD + YNVL+ G C +G L EA  L  ++      
Sbjct: 344 KGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCF 403

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           P+  TY+ +I      G  R  +++FN M + G  P+ VT+  LI      G+LE A + 
Sbjct: 404 PNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLL 463

Query: 616 FSEMQVKGIRPNVI--------------TYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
           F +M++ G  P++               +   ++  LC    I +AY + + + + G  P
Sbjct: 464 FYKMEI-GRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAP 522

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
             YTY IL+N  C  GN+  A +L++EM  + + PD  T+  L+
Sbjct: 523 GIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLI 566



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 140/515 (27%), Positives = 226/515 (43%), Gaps = 51/515 (9%)

Query: 116 TQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIK- 174
           TQ G+  D F +C ++  L  S  +  AY + + +         D  +G    +C ++  
Sbjct: 223 TQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMK--------DSGVGPDFVTCNALLN 274

Query: 175 ---ILDL------LLLIYTKKSMV-------------------EQCLLVFNKMLRNGLLP 206
              +LD       LL ++ K   V                   E   L++ KM+ + + P
Sbjct: 275 GFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKP 334

Query: 207 DVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELL 266
           DV     ++K L + G    A E+   M E G+ P  V YN ++  FC  G + EA  L 
Sbjct: 335 DVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQ 394

Query: 267 WEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEK 326
            E+    C PN  TY++LI+G  RNG    A+ +  +M KLG   SA ++N +I G  + 
Sbjct: 395 LEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKT 454

Query: 327 GLLVEALNLEEEM-----------VTRGVAPTL--ATYNILIYGLCKWGRVSDARHRFFE 373
           G L +A  L  +M           +++G +  L  A+   ++  LC  G +  A     +
Sbjct: 455 GQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQ 514

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           +      P I +YN L+ G+C+ GN   A+ LF E++ + L P  VTY TLI+GL R+  
Sbjct: 515 LADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQR 574

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
            E A ++ + M   G  PD   Y  M+   C+   L  A   + + LR  ++        
Sbjct: 575 EEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSLWLKYLR-NIRSQEDEAIK 633

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            I G  +  +  +A R   EM  K    DL  Y + + GLC+   + EA ++   +    
Sbjct: 634 AIEGYFEKQEVEKAVRGLLEMDFKLNDFDLGPYAIWLIGLCQTRRVGEALKIFLILEEYK 693

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
            +        +I+  L+ GDL R  D+F   + KG
Sbjct: 694 VVITPPCCVKLIYFLLKEGDLDRAIDVFLYTIEKG 728



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 129/244 (52%), Gaps = 2/244 (0%)

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G++    A+   I   LK+G T +A      M      PD+ TYN+++  L +   L  A
Sbjct: 121 GIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLA 180

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
             +  +M+    +P+  T++ +I    + G+++    LF+ M ++G+ P   TY V+I  
Sbjct: 181 LTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISG 240

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
                R++ A+  F +M+  G+ P+ +T NAL+NG C L R+D+A+ L    E++G + +
Sbjct: 241 LCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLD 300

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVH-AVEYL 721
              Y+ LI     A  +++   LY++M++  ++PD   ++ +++K L +  KV  A+E L
Sbjct: 301 VRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYT-IMMKGLAEAGKVRDALELL 359

Query: 722 ESLT 725
             +T
Sbjct: 360 NEMT 363



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 105/449 (23%), Positives = 170/449 (37%), Gaps = 116/449 (25%)

Query: 93  LVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAY-------- 144
           L+R L R +    + L + + +E    VK D +++  +++ L E+G +R A         
Sbjct: 307 LIRGLFRAKRYEDVQLLYRKMIEDN--VKPDVYLYTIMMKGLAEAGKVRDALELLNEMTE 364

Query: 145 -WVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNG 203
             VV   VC N      VLI G           D+ LL   +   +E        + R+ 
Sbjct: 365 SGVVPDTVCYN------VLIKG---------FCDMGLLSEARSLQLE--------ISRHD 401

Query: 204 LLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEAL 263
             P+VK  + +I  +  NG +  A+E++  M + G  PS VT+N+++D  CK G++++A 
Sbjct: 402 CFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAH 461

Query: 264 ELLWEMQ-GR-----------------------------------------------GCS 275
            L ++M+ GR                                               G +
Sbjct: 462 LLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDA 521

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           P   TYN+L+ GF + G    A  L R+M   GL     +Y  +I G        +A  +
Sbjct: 522 PGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKV 581

Query: 336 EEEMVTRGVAPTLATYNILIYGLCK----------WGR---------------------- 363
            ++M   G  P  A Y  ++  +C+          W +                      
Sbjct: 582 FDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSLWLKYLRNIRSQEDEAIKAIEGYFEK 641

Query: 364 --VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
             V  A     EM  K    D+  Y   L G C++  +GEA  +F  L    +V T    
Sbjct: 642 QEVEKAVRGLLEMDFKLNDFDLGPYAIWLIGLCQTRRVGEALKIFLILEEYKVVITPPCC 701

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGIL 450
             LI  L + GDL+ A  +    I +G L
Sbjct: 702 VKLIYFLLKEGDLDRAIDVFLYTIEKGYL 730


>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
            chloroplastic-like [Brachypodium distachyon]
          Length = 1102

 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 158/558 (28%), Positives = 270/558 (48%), Gaps = 37/558 (6%)

Query: 184  TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
            +K S  ++ + VF++M+    +PDV   N +I  L   G   +A +++  + E  + P+ 
Sbjct: 507  SKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTD 566

Query: 244  VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
             TYNT+L    +EG+++E + LL EM      PN +TYN ++    +NGE+  A G++ +
Sbjct: 567  CTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYN 626

Query: 304  MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
            M   G      SYN  + G  ++  L EA  +  +M  + +AP   T   ++    K G 
Sbjct: 627  MTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQM-KKVLAPDYTTLCTILPSFVKNGL 685

Query: 364  VSDARHRFFE-MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            +++A H   E +L+     D  S+++L+ G  +   + ++    + +    ++      +
Sbjct: 686  MNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLS 745

Query: 423  TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
             LI  LC+      A +L +   + G+     +Y  ++ G      + +A   F+EM R 
Sbjct: 746  PLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRL 805

Query: 483  GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
            G  PD F Y   +    K     +  ++Q+EM  KG+    +TYN ++ GL K   L EA
Sbjct: 806  GCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEA 865

Query: 543  NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN-------------------- 582
             +L  K++ +GF P   TY  ++   L+ G +    DLF+                    
Sbjct: 866  MDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNG 925

Query: 583  ---------------NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
                           NM+ +G++P + +YTVLI A    GRL  +  YF ++   G+ P+
Sbjct: 926  YRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPD 985

Query: 628  VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYK 687
            +ITYN LI+GL R  R+++A  LF DME+ GI PN YTY  LI      G   EA ++Y+
Sbjct: 986  LITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYE 1045

Query: 688  EMLDREIEPDYCTHSALL 705
            E+L    +P+  T++AL+
Sbjct: 1046 ELLKNGWKPNVFTYNALI 1063



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 146/518 (28%), Positives = 243/518 (46%), Gaps = 1/518 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           VF+ M R  +  +V     I + L   G    A     MM E GI  +  TYN ++    
Sbjct: 134 VFDLMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFLV 193

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K G  +EA+E+   M   G  P+  TY+VL+  F +  ++E    L+R+M   G+K + +
Sbjct: 194 KSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGKR-DVETVVWLLREMEDHGVKPNVY 252

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           SY   I    + G   EA  + ++M   G  P + T  +LI  LC  GRVSDA+  F++M
Sbjct: 253 SYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKM 312

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
              +  PD ++Y TLL     +G+      +++ +++      VV Y  ++D LC+ G +
Sbjct: 313 KASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRV 372

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A  + + M  +GI P   +Y  +++G  K   L+ A E FN M   G  P+ + Y   
Sbjct: 373 DEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLF 432

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I    K G++ +A +  E M +KG  PD++  N +++ L K G L  A  +  ++   G 
Sbjct: 433 INYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGV 492

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            PD+ITYT +I    +  +      +F+ M+     P ++    LI      GR   A+ 
Sbjct: 493 CPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWK 552

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F E++   + P   TYN L+ GL R  ++ +   L  +M      PN  TY  +++  C
Sbjct: 553 IFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLC 612

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
             G    AL +   M  +   PD  +++  L   + +D
Sbjct: 613 KNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKED 650



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 142/490 (28%), Positives = 218/490 (44%), Gaps = 37/490 (7%)

Query: 185  KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
            K   V   L +   M   G +PD+ + N  +  L       +A  ++  M +  + P   
Sbjct: 613  KNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMKKV-LAPDYT 671

Query: 245  TYNTMLDSFCKEGEMQEALELLWE-MQGRGCSPNGVTYNVLITGFSRNGELE-------- 295
            T  T+L SF K G M EAL  L E +   G   +  +++ L+ G  +   +E        
Sbjct: 672  TLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAEN 731

Query: 296  ---------------------------QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
                                       +A  L++    LG+ +   SYN +ICG  ++ L
Sbjct: 732  IALSRILLDDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENL 791

Query: 329  LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNT 388
            +  A  L  EM   G  P   TYN+++  + K  R+ D      EM  K      ++YNT
Sbjct: 792  IDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNT 851

Query: 389  LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
            ++ G  +S  + EA  L+ +L S    PT  TY  L+DGL + G +E A+ L + M++ G
Sbjct: 852  IISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYG 911

Query: 449  ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
              P+   Y I++NG    GN     E F  M+ +G+ PD  +YT  I      G  +++ 
Sbjct: 912  CKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSL 971

Query: 509  RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
                ++   G  PDLITYN+L+HGL + G LEEA  L   M   G  P+  TY S+I   
Sbjct: 972  SYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYL 1031

Query: 569  LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
             + G       ++  +L+ G  P + TY  LI  ++  G  + AF  + +M V G  PN 
Sbjct: 1032 GKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNS 1091

Query: 629  ITYNALINGL 638
             TY  L N L
Sbjct: 1092 STYMQLPNQL 1101



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 138/531 (25%), Positives = 253/531 (47%), Gaps = 21/531 (3%)

Query: 100 IREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGIL 159
           +R  P +AL   +    + G+  + + +  ++  L++SG  R A  V + +      GI+
Sbjct: 163 LRSAP-VALPMMK----EAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMA---TDGIV 214

Query: 160 DVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLR 219
                       S++   +L+L + K+  VE  + +  +M  +G+ P+V +    I+VL 
Sbjct: 215 P-----------SVRTYSVLMLAFGKRD-VETVVWLLREMEDHGVKPNVYSYTICIRVLG 262

Query: 220 DNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGV 279
             G   +A ++ + M + G KP +VT   ++   C  G + +A ++ W+M+     P+ V
Sbjct: 263 QAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRV 322

Query: 280 TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
           TY  L+     NG+      +   M   G   +  +Y  ++    + G + EA ++ ++M
Sbjct: 323 TYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQM 382

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
             +G+ P   +YN LI G  K  R++ A   F  M      P+  +Y   +  Y +SG  
Sbjct: 383 KQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGES 442

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
            +A   ++ ++S+ +VP VV  N ++  L + G L +A+++   + + G+ PD ITYT+M
Sbjct: 443 LKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMM 502

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           +    K  N   A + F+EM+     PD  A  + I    K G  +EA+++  E+     
Sbjct: 503 IKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNL 562

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
            P   TYN L+ GL + G ++E   LL +M  + + P+ ITY +++    + G++     
Sbjct: 563 DPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALG 622

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
           +  NM  KG  P L +Y   +H      RL  AF  F +M+ K + P+  T
Sbjct: 623 MLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMK-KVLAPDYTT 672



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 156/662 (23%), Positives = 291/662 (43%), Gaps = 36/662 (5%)

Query: 93  LVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVE---- 148
           +V +L      P  AL+ F+ V  QP +         +LE++   G +R    V +    
Sbjct: 81  VVHMLRSAAADPAEALQLFKSVAQQPRIVHTTESCNYMLELMRAHGRVRDMAQVFDLMQR 140

Query: 149 TVVCVNMHGILDV-----LIGGGLSSCVSIKILD---LLLLIYTKKSMV---------EQ 191
            +V  N+   L +     + GG  S+ V++ ++    ++L  YT   ++          +
Sbjct: 141 QIVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFLVKSGYDRE 200

Query: 192 CLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV------YRMMGEFGIKPSIVT 245
            + V+  M  +G++P V+  + ++        +   R+V       R M + G+KP++ +
Sbjct: 201 AMEVYKVMATDGIVPSVRTYSVLM-------LAFGKRDVETVVWLLREMEDHGVKPNVYS 253

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           Y   +    + G  +EA ++L +M+  GC P+ VT  VLI      G +  A+ +   M 
Sbjct: 254 YTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMK 313

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
               K    +Y  ++    + G     + +   M   G    +  Y  ++  LC+ GRV 
Sbjct: 314 ASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVD 373

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
           +A   F +M +K + P   SYN+L+ G+ ++  +  A  LF+ +      P   TY   I
Sbjct: 374 EASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFI 433

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           +   + G+   A +  E M ++GI+PDV+    ++    K G L MA+  F+E+   G+ 
Sbjct: 434 NYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVC 493

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           PD   YT  I    K  +  EA ++  EM+     PD++  N L+  L K G   EA ++
Sbjct: 494 PDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKI 553

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
             ++      P   TY +++      G ++    L   M      P L+TY  ++     
Sbjct: 554 FHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCK 613

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
            G +  A      M +KG  P++ +YN  ++GL +  R+ +A+ +F  M++  + P+  T
Sbjct: 614 NGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMKKV-LAPDYTT 672

Query: 666 YTILINENCNAGNWQEALRLYKE-MLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
              ++      G   EAL   KE +L    + D  +  +L+   L +     ++E+ E++
Sbjct: 673 LCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENI 732

Query: 725 TL 726
            L
Sbjct: 733 AL 734



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 139/284 (48%), Gaps = 1/284 (0%)

Query: 179  LLLIYTKKSM-VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
            L+L    KSM +E  L V  +M   G        N II  L  +    +A ++Y  +   
Sbjct: 816  LILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSE 875

Query: 238  GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
            G  P+  TY  +LD   K+G++++A +L  EM   GC PN   YN+L+ G+   G  E+ 
Sbjct: 876  GFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKV 935

Query: 298  RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
              L ++M+  G+     SY  +I      G L ++L+   ++   G+ P L TYN+LI+G
Sbjct: 936  CELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHG 995

Query: 358  LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
            L + GR+ +A   F +M +  + P++ +YN+L+    + G   EA  +++EL      P 
Sbjct: 996  LGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPN 1055

Query: 418  VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
            V TYN LI G    G  + A      MI  G  P+  TY  + N
Sbjct: 1056 VFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTYMQLPN 1099



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 90/177 (50%)

Query: 175  ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
            I ++LL  Y      E+   +F  M+  G+ PD+K+   +I  L   G    +   +R +
Sbjct: 918  IYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQL 977

Query: 235  GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
             E G++P ++TYN ++    + G ++EA+ L  +M+  G +PN  TYN LI    + G+ 
Sbjct: 978  TELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKA 1037

Query: 295  EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
             +A  +  ++LK G K +  +YN +I GYS  G    A     +M+  G  P  +TY
Sbjct: 1038 AEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTY 1094



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 70/144 (48%)

Query: 173  IKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR 232
            IK   +L+        +   L  F ++   GL PD+   N +I  L  +G   +A  ++ 
Sbjct: 951  IKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFN 1010

Query: 233  MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
             M + GI P++ TYN+++    KEG+  EA ++  E+   G  PN  TYN LI G+S +G
Sbjct: 1011 DMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSG 1070

Query: 293  ELEQARGLIRDMLKLGLKVSAHSY 316
              + A      M+  G   ++ +Y
Sbjct: 1071 STDNAFASYGQMIVGGCPPNSSTY 1094


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 145/500 (29%), Positives = 238/500 (47%), Gaps = 36/500 (7%)

Query: 191 QCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTML 250
           + L +   M+R G  PDV  C ++IK         KA  V  ++ +FG +P +  YN ++
Sbjct: 103 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDVFAYNALI 161

Query: 251 DSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
           + FCK   + +A  +L  M+ +  SP+ VTYN++I      G+L+           L LK
Sbjct: 162 NGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLD-----------LALK 210

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
           V                         +++++    PT+ TY ILI      G V +A   
Sbjct: 211 VL------------------------DQLLSDNCQPTVITYTILIEATMLEGGVDEALKL 246

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
             EML + + PD+ +YNT++ G C+ G +  AF +   L  +   P V++YN L+  L  
Sbjct: 247 LDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLN 306

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
            G  E  ++L   M ++   P+V+TY+I++   C+ G +  A      M  KGL PD ++
Sbjct: 307 QGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYS 366

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           Y   IA   + G    A    E M++ G  PD++ YN ++  LCK G  ++A E+  K+ 
Sbjct: 367 YDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLG 426

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
             G  P+  +Y ++  A    GD  R   +   M+  G+ P  +TY  +I      G ++
Sbjct: 427 EVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVD 486

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
            AF    +M+     P+V+TYN ++ G C+  RI+ A  +   M   G  PN+ TYT+LI
Sbjct: 487 KAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLI 546

Query: 671 NENCNAGNWQEALRLYKEML 690
                AG   EA+ L  +++
Sbjct: 547 EGIGFAGYRAEAMELANDLV 566



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 124/379 (32%), Positives = 201/379 (53%), Gaps = 1/379 (0%)

Query: 327 GLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISY 386
           G  +E+L+L E MV +G  P +     LI G      V  A  R  E+L K   PD+ +Y
Sbjct: 99  GNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAV-RVMEILEKFGQPDVFAY 157

Query: 387 NTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMIN 446
           N L+ G+C+   I +A  + D +RS++  P  VTYN +I  LC  G L++A ++ + +++
Sbjct: 158 NALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLS 217

Query: 447 QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSE 506
               P VITYTI++  +   G +  A +  +EML +GL+PD F Y T I G  K G    
Sbjct: 218 DNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDR 277

Query: 507 AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
           A+ +   +  KG  PD+I+YN+L+  L   G  EE  +L+ KM  +   P+ +TY+ +I 
Sbjct: 278 AFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILIT 337

Query: 567 ASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRP 626
                G +    +L   M  KGL+P   +Y  LI A    GRL++A  +   M   G  P
Sbjct: 338 TLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLP 397

Query: 627 NVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLY 686
           +++ YN ++  LC+  + DQA  +F  + E G  PN  +Y  + +   ++G+   AL + 
Sbjct: 398 DIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMI 457

Query: 687 KEMLDREIEPDYCTHSALL 705
            EM+   I+PD  T+++++
Sbjct: 458 LEMVSNGIDPDEITYNSMI 476



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/471 (28%), Positives = 229/471 (48%), Gaps = 1/471 (0%)

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           C+ G   E+L LL  M  +G +P+ +    LI GF     + +A  ++  + K G +   
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDV 154

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
            +YN +I G+ +   + +A  + + M ++  +P   TYNI+I  LC  G++  A     +
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           +L  N  P +I+Y  L+      G + EA  L DE+ SR L P + TYNT+I G+C+ G 
Sbjct: 215 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGM 274

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           ++ A ++  N+  +G  PDVI+Y I++      G      +   +M  +   P+   Y+ 
Sbjct: 275 VDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 334

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            I    + G   EA  L + M  KG  PD  +Y+ L+   C+ G L+ A E L  M+ DG
Sbjct: 335 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 394

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
            +PD + Y +++    + G   +  ++F  +   G SP   +Y  +  A  + G    A 
Sbjct: 395 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 454

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
               EM   GI P+ ITYN++I+ LCR   +D+A+ L +DM      P+  TY I++   
Sbjct: 455 HMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGF 514

Query: 674 CNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           C A   ++A+ +   M+     P+  T++ L+       Y+  A+E    L
Sbjct: 515 CKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 565



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 136/253 (53%), Gaps = 2/253 (0%)

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
           SC+ GN   +      M+RKG  PD    T  I G   L +  +A R+  E+L K   PD
Sbjct: 95  SCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVM-EILEKFGQPD 153

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
           +  YN L++G CK+  +++A  +L +M    F PD +TY  +I +    G L     + +
Sbjct: 154 VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLD 213

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
            +L     PT++TYT+LI A    G ++ A     EM  +G++P++ TYN +I G+C+  
Sbjct: 214 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEG 273

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
            +D+A+ +  ++E +G  P+  +Y IL+    N G W+E  +L  +M   + +P+  T+S
Sbjct: 274 MVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 333

Query: 703 ALLLKQLDKDYKV 715
            +L+  L +D K+
Sbjct: 334 -ILITTLCRDGKI 345



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 157/327 (48%), Gaps = 14/327 (4%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G+K D F + TI+  + + G++  A+ ++            ++ + G     +S  IL  
Sbjct: 254 GLKPDMFTYNTIIRGMCKEGMVDRAFEMIR-----------NLELKGCEPDVISYNILLR 302

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
            LL   K    E+   +  KM      P+V   + +I  L  +G   +A  + ++M E G
Sbjct: 303 ALLNQGKWEEGEK---LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 359

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           + P   +Y+ ++ +FC+EG +  A+E L  M   GC P+ V YN ++    +NG+ +QA 
Sbjct: 360 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 419

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            +   + ++G   ++ SYN +       G  + AL++  EMV+ G+ P   TYN +I  L
Sbjct: 420 EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCL 479

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C+ G V  A     +M      P +++YN +L G+C++  I +A  + D +      P  
Sbjct: 480 CREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNE 539

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMI 445
            TY  LI+G+   G    A +L  +++
Sbjct: 540 TTYTVLIEGIGFAGYRAEAMELANDLV 566



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 108/206 (52%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           D L+  + ++  ++  +     M+ +G LPD+ N N ++  L  NG + +A E++  +GE
Sbjct: 368 DPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGE 427

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G  P+  +YNTM  +    G+   AL ++ EM   G  P+ +TYN +I+   R G +++
Sbjct: 428 VGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDK 487

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  L+ DM       S  +YN ++ G+ +   + +A+++ + MV  G  P   TY +LI 
Sbjct: 488 AFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIE 547

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPD 382
           G+   G  ++A     +++R N I +
Sbjct: 548 GIGFAGYRAEAMELANDLVRINAISE 573



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 1/198 (0%)

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           + H  C+ G+  E+  LL  MV  G+ PD I  T +I     + ++ +   +   +L K 
Sbjct: 91  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVME-ILEKF 149

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
             P +  Y  LI+      R++ A      M+ K   P+ +TYN +I  LC   ++D A 
Sbjct: 150 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 209

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQ 708
            +   +  +   P   TYTILI      G   EAL+L  EML R ++PD  T++ ++   
Sbjct: 210 KVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGM 269

Query: 709 LDKDYKVHAVEYLESLTL 726
             +     A E + +L L
Sbjct: 270 CKEGMVDRAFEMIRNLEL 287


>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
 gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
          Length = 1302

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 147/477 (30%), Positives = 237/477 (49%), Gaps = 1/477 (0%)

Query: 249  MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
            ML +F + G + EA+ ++ +MQ +G +P+ +T N ++      G +E A  +  +M   G
Sbjct: 754  MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 813

Query: 309  LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            +   + SY  ++ G    G + EA      M+ RG  P  AT  +++  LC+ G V+ A 
Sbjct: 814  VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 873

Query: 369  HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
              F +M+     P++I++ +L+ G C+ G+I +AF + +E+      P V T+  LIDGL
Sbjct: 874  WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 933

Query: 429  CRYGDLEVAQQLKENMINQGIL-PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
            C+ G  E A +L   ++      P+V TYT M+ G CK   L+ A   F+ M  +GL P+
Sbjct: 934  CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 993

Query: 488  RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
               YTT I G  K G    AY L   M  +GF P++ TYN  +  LCK     EA ELL 
Sbjct: 994  VNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLN 1053

Query: 548  KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
            K    G   D +TYT +I    +  D+ +    F  M + G    +    +LI A   + 
Sbjct: 1054 KAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQK 1113

Query: 608  RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
            +++ +   F  +   G+ P   TY ++I+  C+   ID A   F +M+  G +P+ +TY 
Sbjct: 1114 KMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYG 1173

Query: 668  ILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
             LI+  C      EA +LY+ M+DR + P   T   L  +   ++   +A+  LE L
Sbjct: 1174 SLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPL 1230



 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 143/462 (30%), Positives = 226/462 (48%), Gaps = 2/462 (0%)

Query: 234  MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
            M   G+ PS +T N +L+   + G ++ A  +  EM  RG  P+  +Y +++ G  R+G+
Sbjct: 774  MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGK 833

Query: 294  LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
            +++A   +  M++ G      +   I+    E GL+  A+    +M+  G  P L  +  
Sbjct: 834  IQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTS 893

Query: 354  LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL-RSR 412
            LI GLCK G +  A     EM+R    P++ ++  L+ G C+ G   +AF LF +L RS 
Sbjct: 894  LIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD 953

Query: 413  NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
               P V TY ++I G C+   L  A+ L   M  QG+ P+V TYT ++NG CK G+   A
Sbjct: 954  TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRA 1013

Query: 473  REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
             E  N M  +G  P+ + Y   I    K     EAY L  +  + G   D +TY +L+  
Sbjct: 1014 YELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQE 1073

Query: 533  LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
             CK   + +A     +M   GF  D      +I A      ++    LF  ++  GL PT
Sbjct: 1074 QCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPT 1133

Query: 593  LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
              TYT +I  +   G ++LA  YF  M+  G  P+  TY +LI+GLC+   +D+A  L+ 
Sbjct: 1134 KETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYE 1193

Query: 653  DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
             M + G+ P + T   L  E C   +   A+ L  E LD+++
Sbjct: 1194 AMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILL-EPLDKKL 1234



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 143/507 (28%), Positives = 240/507 (47%), Gaps = 4/507 (0%)

Query: 199  MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
            M   GL P     N ++++  + G    A  V+  M   G+ P   +Y  M+    ++G+
Sbjct: 774  MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGK 833

Query: 259  MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
            +QEA   L  M  RG  P+  T  +++T    NG + +A    R M+ LG K +  ++  
Sbjct: 834  IQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTS 893

Query: 319  IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
            +I G  +KG + +A  + EEMV  G  P + T+  LI GLCK G    A   F +++R +
Sbjct: 894  LIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD 953

Query: 379  VI-PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
               P++ +Y +++ GYC+   +  A +LF  ++ + L P V TY TLI+G C+ G    A
Sbjct: 954  TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRA 1013

Query: 438  QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
             +L   M ++G +P++ TY   ++  CK      A E  N+    GL+ D   YT  I  
Sbjct: 1014 YELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQE 1073

Query: 498  ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
            + K  D ++A      M   GF  D+   N+L+   C+   ++E+  L + +V  G IP 
Sbjct: 1074 QCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPT 1133

Query: 558  HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
              TYTS+I    + GD+      F+NM R G  P   TY  LI     +  ++ A   + 
Sbjct: 1134 KETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYE 1193

Query: 618  EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
             M  +G+ P  +T   L    C  +R D A  + +    +  L  + T   L+ + C+  
Sbjct: 1194 AMIDRGLSPPEVTRVTLAYEYC--KRNDSANAMILLEPLDKKLWIR-TVRTLVRKLCSEK 1250

Query: 678  NWQEALRLYKEMLDREIEPDYCTHSAL 704
                A   ++++L+++   D  T +A 
Sbjct: 1251 KVGVAALFFQKLLEKDSSADRVTLAAF 1277



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 206/464 (44%), Gaps = 20/464 (4%)

Query: 112  RWVE--TQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSS 169
            RW+    Q G   D      IL  L E+GL+  A W            ++D+     L +
Sbjct: 839  RWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWY--------FRKMIDLGFKPNLIN 890

Query: 170  CVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE 229
              S  ++D L     KK  ++Q   +  +M+RNG  P+V     +I  L   G++ KA  
Sbjct: 891  FTS--LIDGL----CKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFR 944

Query: 230  VY-RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGF 288
            ++ +++     KP++ TY +M+  +CKE ++  A  L   M+ +G  PN  TY  LI G 
Sbjct: 945  LFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGH 1004

Query: 289  SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTL 348
             + G   +A  L+  M   G   + ++YN  I    +K    EA  L  +  + G+    
Sbjct: 1005 CKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADG 1064

Query: 349  ATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDE 408
             TY ILI   CK   ++ A   F  M +     D+   N L+  +CR   + E+  LF  
Sbjct: 1065 VTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQL 1124

Query: 409  LRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGN 468
            + S  L+PT  TY ++I   C+ GD+++A +   NM   G +PD  TY  +++G CK   
Sbjct: 1125 VVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSM 1184

Query: 469  LSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNV 528
            +  A + +  M+ +GL P      T      K  D++ A  L E +  K +   + T   
Sbjct: 1185 VDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLW---IRTVRT 1241

Query: 529  LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
            LV  LC    +  A    +K++      D +T  +   A  E G
Sbjct: 1242 LVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESG 1285


>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
          Length = 551

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 127/417 (30%), Positives = 220/417 (52%), Gaps = 5/417 (1%)

Query: 257 GEMQEALELLWEMQGRGCSPNGVT---YNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           G +  A +LL   Q     P+ VT    +V++ G+ ++G +  AR L+ +M + G+KV+A
Sbjct: 121 GHLDTAADLLK--QAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNA 178

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
             YN ++  Y+ +        + + M   G+ PT+ TY IL+ GL     ++     F E
Sbjct: 179 LCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEE 238

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M  KN+  D+  Y++++  YCR+GN+  A  +FDE     + P   TY  LI+G C+ G 
Sbjct: 239 MKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQ 298

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           +E A+ L  +M  +G+  + I +  M++G C+   +  A E    M + G++ D + Y T
Sbjct: 299 MEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNT 358

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
              G  +     EA  L   M+ KG  P+ ++Y  L+   C  G + EA  L R+M G+G
Sbjct: 359 LACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNG 418

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
             P  +TY  ++   ++ G +R        M +KGL P + +Y  L+H H   G++++A 
Sbjct: 419 AEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVAL 478

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
             F EM+ +G +PN++ Y ALI+GL +  R ++A+ L+ +M  +G+ P+   Y+ L+
Sbjct: 479 RLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALV 535



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 128/412 (31%), Positives = 210/412 (50%), Gaps = 13/412 (3%)

Query: 303 DMLKLGLKVSAHSYNP-----IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
           D+LK        S  P     ++ GY + G +  A  L +EM   GV      YN L   
Sbjct: 128 DLLKQAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSL--- 184

Query: 358 LCKWGRVSDARHRFFEMLR----KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           L  + R  D   R  EML+    + + P + +Y  L+ G   + +I +   +F+E++S+N
Sbjct: 185 LDAYTREKD-DDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKN 243

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           L   V  Y+++I+  CR G++  A ++ +  +  GI P+  TY  ++NG CK+G +  A 
Sbjct: 244 LSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAE 303

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
               +M  +G+  ++  + T I G  +     +A  ++  M   G   D+ TYN L  GL
Sbjct: 304 MLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGL 363

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
            +   ++EA  LLR M+  G  P+H++YT++I      GD+   R LF  M   G  P+L
Sbjct: 364 RRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSL 423

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
           VTY V++  +  +G +  A  +  EM+ KG+ P++ +Y AL++G C   ++D A  LF +
Sbjct: 424 VTYNVMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEE 483

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           M++ G  PN   YT LI+     G  +EA +LY  ML   + PD   +SAL+
Sbjct: 484 MKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALV 535



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 202/395 (51%)

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           ++ + ++D +CK G +  A +LL EM   G   N + YN L+  ++R  + ++   +++ 
Sbjct: 144 LSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKV 203

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M   G++ +  +Y  ++ G S    + +   + EEM ++ ++  +  Y+ +I   C+ G 
Sbjct: 204 MENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGN 263

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           V  A   F E +   + P+  +Y  L+ G+C+ G +  A +L  +++ R +    + +NT
Sbjct: 264 VRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNT 323

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           +IDG CR   ++ A ++K  M   GI  DV TY  +  G  +   +  A+     M+ KG
Sbjct: 324 MIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKG 383

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           ++P+  +YTT I+     GD  EA RL  EM   G  P L+TYNV++ G  K GS+ EA 
Sbjct: 384 VRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAE 443

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
              ++M   G +PD  +Y +++H     G +     LF  M ++G  P LV YT LI   
Sbjct: 444 RFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGL 503

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           A  GR E AF  +  M   G+ P+   Y+AL+  L
Sbjct: 504 AKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSL 538



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/355 (31%), Positives = 190/355 (53%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL  YT++   ++   +   M   G+ P V     ++  L       K   V+  M    
Sbjct: 184 LLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKN 243

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           +   +  Y+++++++C+ G ++ A E+  E  G G  PN  TY  LI GF + G++E A 
Sbjct: 244 LSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAE 303

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L+ DM   G+ ++   +N +I GY  K ++ +AL ++  M   G+   + TYN L  GL
Sbjct: 304 MLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGL 363

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
            +  R+ +A++    M+ K V P+ +SY TL+  +C  G++ EA  LF E+      P++
Sbjct: 364 RRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSL 423

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           VTYN ++DG  + G +  A++ K+ M  +G++PD+ +Y  +V+G C  G + +A   F E
Sbjct: 424 VTYNVMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEE 483

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
           M ++G +P+  AYT  I+G  K G + EA++L + ML  G  PD   Y+ LV  L
Sbjct: 484 MKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSL 538



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/380 (29%), Positives = 179/380 (47%), Gaps = 35/380 (9%)

Query: 221 NGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVT 280
           +G    AR++   M   G+K + + YN++LD++ +E +     E+L  M+  G  P   T
Sbjct: 156 SGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGT 215

Query: 281 YNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV 340
           Y +L+ G S   ++ +   +  +M    L    + Y+ +I  Y   G +  A  + +E V
Sbjct: 216 YTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECV 275

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
             G+ P   TY  LI G CK G++  A     +M  + V  + I +NT++ GYCR   + 
Sbjct: 276 GNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVD 335

Query: 401 EAFLL----------------------------FDELRS-------RNLVPTVVTYNTLI 425
           +A  +                             DE ++       + + P  V+Y TLI
Sbjct: 336 KALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLI 395

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
              C  GD+  A++L   M   G  P ++TY +M++G  K G++  A  F  EM +KGL 
Sbjct: 396 SIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLV 455

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           PD ++Y   + G    G    A RL EEM  +G  P+L+ Y  L+ GL K G  EEA +L
Sbjct: 456 PDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQL 515

Query: 546 LRKMVGDGFIPDHITYTSII 565
              M+GDG  PD   Y++++
Sbjct: 516 YDNMLGDGLTPDDALYSALV 535


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 154/540 (28%), Positives = 253/540 (46%), Gaps = 48/540 (8%)

Query: 191 QCLLVFNKMLRNGLLPDVKNCNRIIK---VLRDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
           + L +   M+R G  PDV  C ++IK    LR+   +V+  E+    G+    P +  YN
Sbjct: 107 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ----PDVFAYN 162

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
            +++ FCK   + +A  +L  M+ +  SP+ VTYN++I      G+L+           L
Sbjct: 163 ALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLD-----------L 211

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
            LKV                     LN   ++++    PT+ TY ILI      G V +A
Sbjct: 212 ALKV---------------------LN---QLLSDNCQPTVITYTILIEATMLEGGVDEA 247

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
                EML + + PD+ +YNT++ G C+ G +  AF +   L  +   P V++YN L+  
Sbjct: 248 LKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRA 307

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           L   G  E  ++L   M ++   P+V+TY+I++   C+ G +  A      M  KGL PD
Sbjct: 308 LLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPD 367

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
            ++Y   IA   + G    A    E M++ G  PD++ YN ++  LCK G  ++A E+  
Sbjct: 368 AYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFG 427

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
           K+   G  P+  +Y ++  A    GD  R   +   M+  G+ P  +TY  +I      G
Sbjct: 428 KLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREG 487

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
            ++ AF    +M+     P+V+TYN ++ G C+  RI+ A  +   M   G  PN+ TYT
Sbjct: 488 MVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYT 547

Query: 668 ILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLG 727
           +LI     AG   EA+ L  +++  +   +Y        K+L + + +  V    S T G
Sbjct: 548 VLIEGIGFAGYRAEAMELANDLVRIDAISEYS------FKRLHRTFPLLNVLQRSSQTFG 601



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 135/471 (28%), Positives = 230/471 (48%), Gaps = 1/471 (0%)

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           C+ G   E+L LL  M  +G +P+ +    LI GF     + +A  ++  + K G +   
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
            +YN +I G+ +   + +A  + + M ++  +P   TYNI+I  LC  G++  A     +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           +L  N  P +I+Y  L+      G + EA  L DE+ SR L P + TYNT+I G+C+ G 
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           ++ A ++  N+  +G  PDVI+Y I++      G      +   +M  +   P+   Y+ 
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            I    + G   EA  L + M  KG  PD  +Y+ L+   C+ G L+ A E L  M+ DG
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
            +PD + Y +++    + G   +  ++F  +   G SP   +Y  +  A  + G    A 
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
               EM   GI P+ ITYN++I+ LCR   +D+A+ L +DM      P+  TY I++   
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGF 518

Query: 674 CNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           C A   ++A+ + + M+     P+  T++ L+       Y+  A+E    L
Sbjct: 519 CKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 136/254 (53%), Gaps = 2/254 (0%)

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
           SC+ GN   +      M+RKG  PD    T  I G   L +  +A R+  E+L K   PD
Sbjct: 99  SCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPD 157

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
           +  YN L++G CK+  +++A  +L +M    F PD +TY  +I +    G L     + N
Sbjct: 158 VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLN 217

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
            +L     PT++TYT+LI A    G ++ A     EM  +G++P++ TYN +I G+C+  
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
            +D+A+ +  ++E +G  P+  +Y IL+    N G W+E  +L  +M   + +P+  T+S
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337

Query: 703 ALLLKQLDKDYKVH 716
            +L+  L +D K+ 
Sbjct: 338 -ILITTLCRDGKIE 350



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/327 (26%), Positives = 158/327 (48%), Gaps = 14/327 (4%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G+K D F + TI+  + + G++  A+ +V            ++ + G     +S  IL  
Sbjct: 258 GLKPDMFTYNTIIRGMCKEGMVDRAFEMVR-----------NLELKGCEPDVISYNILLR 306

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
            LL   K    E+   +  KM      P+V   + +I  L  +G   +A  + ++M E G
Sbjct: 307 ALLNQGKWEEGEK---LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           + P   +Y+ ++ +FC+EG +  A+E L  M   GC P+ V YN ++    +NG+ +QA 
Sbjct: 364 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 423

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            +   + ++G   ++ SYN +       G  + AL++  EM++ G+ P   TYN +I  L
Sbjct: 424 EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCL 483

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C+ G V +A     +M      P +++YN +L G+C++  I +A  + + +      P  
Sbjct: 484 CREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNE 543

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMI 445
            TY  LI+G+   G    A +L  +++
Sbjct: 544 TTYTVLIEGIGFAGYRAEAMELANDLV 570



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 108/206 (52%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           D L+  + ++  ++  +     M+ +G LPD+ N N ++  L  NG + +A E++  +GE
Sbjct: 372 DPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGE 431

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G  P+  +YNTM  +    G+   AL ++ EM   G  P+ +TYN +I+   R G +++
Sbjct: 432 VGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDE 491

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  L+ DM       S  +YN ++ G+ +   + +A+N+ E MV  G  P   TY +LI 
Sbjct: 492 AFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIE 551

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPD 382
           G+   G  ++A     +++R + I +
Sbjct: 552 GIGFAGYRAEAMELANDLVRIDAISE 577



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 1/142 (0%)

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           I H S   G+      L   M+RKG +P ++  T LI        +  A      ++  G
Sbjct: 95  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
            +P+V  YNALING C++ RID A  +   M  +   P+  TY I+I   C+ G    AL
Sbjct: 155 -QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213

Query: 684 RLYKEMLDREIEPDYCTHSALL 705
           ++  ++L    +P   T++ L+
Sbjct: 214 KVLNQLLSDNCQPTVITYTILI 235


>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
 gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
 gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 687

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 171/617 (27%), Positives = 277/617 (44%), Gaps = 51/617 (8%)

Query: 90  PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVET 149
           P+ ++++L +  + PR A   F      PG      V+  IL  L E+ ++     +VE 
Sbjct: 10  PKHVLKLL-KSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVEL 68

Query: 150 VVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVK 209
           +         DV +               ++  Y K SM +Q L VF +M          
Sbjct: 69  IRSQECKCDEDVALS--------------VIKTYGKNSMPDQALDVFKRM---------- 104

Query: 210 NCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM 269
                             RE+      FG +P+I +YNT+L++F +  +  +   L    
Sbjct: 105 ------------------REI------FGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYF 140

Query: 270 QGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLL 329
           +  G +PN  TYNVLI    +  E E+ARG +  M K G K    SY+ +I   ++ G L
Sbjct: 141 ETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKL 200

Query: 330 VEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR-KNVIPDIISYNT 388
            +AL L +EM  RGVAP +  YNILI G  K      A   +  +L   +V P++ ++N 
Sbjct: 201 DDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNI 260

Query: 389 LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
           ++ G  + G + +   +++ ++       + TY++LI GLC  G+++ A+ +   +  + 
Sbjct: 261 MISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERK 320

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
              DV+TY  M+ G C+ G +  + E +  M  K    +  +Y   I G L+ G   EA 
Sbjct: 321 ASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEAT 379

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
            +   M AKG+  D  TY + +HGLC  G + +A  +++++   G   D   Y SII   
Sbjct: 380 MIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCL 439

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
            +   L    +L   M + G+         LI       RL  A  +  EM   G RP V
Sbjct: 440 CKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTV 499

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
           ++YN LI GLC+  +  +A     +M E G  P+  TY+IL+   C       AL L+ +
Sbjct: 500 VSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQ 559

Query: 689 MLDREIEPDYCTHSALL 705
            L   +E D   H+ L+
Sbjct: 560 FLQSGLETDVMMHNILI 576



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 142/536 (26%), Positives = 249/536 (46%), Gaps = 39/536 (7%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           +++  ++L+ +  KK   E+     + M + G  PDV + + +I  L   G    A E++
Sbjct: 148 NLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELF 207

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWE--MQGRGCSPNGVTYNVLITGFS 289
             M E G+ P +  YN ++D F KE + + A+EL W+  ++     PN  T+N++I+G S
Sbjct: 208 DEMSERGVAPDVTCYNILIDGFLKEKDHKTAMEL-WDRLLEDSSVYPNVKTHNIMISGLS 266

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           + G ++    +   M +   +   ++Y+ +I G  + G + +A ++  E+  R  +  + 
Sbjct: 267 KCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVV 326

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           TYN ++ G C+ G++ ++   +  M  KN + +I+SYN L+ G   +G I EA +++  +
Sbjct: 327 TYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLENGKIDEATMIWRLM 385

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
            ++       TY   I GLC  G +  A  + + + + G   DV  Y  +++  CK   L
Sbjct: 386 PAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRL 445

Query: 470 SMARE-----------------------------------FFNEMLRKGLQPDRFAYTTQ 494
             A                                     F  EM + G +P   +Y   
Sbjct: 446 EEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNIL 505

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I G  K G   EA    +EML  G+ PDL TY++L+ GLC+   ++ A EL  + +  G 
Sbjct: 506 ICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGL 565

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
             D + +  +IH    +G L     +  NM  +  +  LVTY  L+      G    A +
Sbjct: 566 ETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATV 625

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
            +  M   G++P++I+YN ++ GLC  R +  A   F D    GI P  YT+ IL+
Sbjct: 626 IWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 153/578 (26%), Positives = 253/578 (43%), Gaps = 79/578 (13%)

Query: 58  YKELIISTVEEKPWAFCNNRWVSDHFQAVVSDPEL-----LVRVLNRIREKPRIALRFFR 112
           Y  L+ + VE K W    + +   +F+     P L     L+++  + +E  + A  F  
Sbjct: 117 YNTLLNAFVEAKQWVKVESLFA--YFETAGVAPNLQTYNVLIKMSCKKKEFEK-ARGFLD 173

Query: 113 WVETQPGVKRDEFVFCTILEILIESGLLRSAY---------WVVETVVCVNMHGILDVLI 163
           W+  + G K D F + T++  L ++G L  A           V   V C N      +LI
Sbjct: 174 WM-WKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYN------ILI 226

Query: 164 GGGL-------------------SSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGL 204
            G L                   S   ++K  ++++   +K   V+ CL ++ +M +N  
Sbjct: 227 DGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNER 286

Query: 205 LPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALE 264
             D+   + +I  L D G   KA  V+  + E      +VTYNTML  FC+ G+++E+LE
Sbjct: 287 EKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLE 346

Query: 265 LLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR-------------------------- 298
           L W +     S N V+YN+LI G   NG++++A                           
Sbjct: 347 L-WRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLC 405

Query: 299 ---------GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
                    G+++++   G  +  ++Y  II    +K  L EA NL +EM   GV     
Sbjct: 406 VNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSH 465

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
             N LI GL +  R+ +A     EM +    P ++SYN L+ G C++G  GEA     E+
Sbjct: 466 VCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEM 525

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
                 P + TY+ L+ GLCR   +++A +L    +  G+  DV+ + I+++G C +G L
Sbjct: 526 LENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKL 585

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A      M  +    +   Y T + G  K+GD++ A  +   M   G  PD+I+YN +
Sbjct: 586 DDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTI 645

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
           + GLC    +  A E        G  P   T+  ++ A
Sbjct: 646 MKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRA 683


>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g09680
 gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
 gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 607

 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 141/496 (28%), Positives = 243/496 (48%), Gaps = 27/496 (5%)

Query: 90  PELLVR-VLNRIREKP-----RIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSA 143
           P L V  V++ I   P     R    FF+++ +QPG +     +  +   L    +   A
Sbjct: 78  PSLSVHHVVDLINHNPLSLPQRSIFAFFKFISSQPGFRFTVETYFVLARFLAVHEMFTEA 137

Query: 144 YWVVETVVCVNMHGILDVLIGGGLSSCVSIKIL------------DLLLLIYTKKSMVEQ 191
             ++E VV            G   +S V I ++            D L++ YT    +  
Sbjct: 138 QSLIELVVSRK---------GKNSASSVFISLVEMRVTPMCGFLVDALMITYTDLGFIPD 188

Query: 192 CLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLD 251
            +  F    ++     ++ C  ++  +     +      Y  + + G   ++  +N +++
Sbjct: 189 AIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMN 248

Query: 252 SFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKV 311
            FCKEG + +A ++  E+  R   P  V++N LI G+ + G L++   L   M K   + 
Sbjct: 249 KFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRP 308

Query: 312 SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRF 371
              +Y+ +I    ++  +  A  L +EM  RG+ P    +  LI+G  + G +   +  +
Sbjct: 309 DVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESY 368

Query: 372 FEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY 431
            +ML K + PDI+ YNTL+ G+C++G++  A  + D +  R L P  +TY TLIDG CR 
Sbjct: 369 QKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRG 428

Query: 432 GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAY 491
           GD+E A ++++ M   GI  D + ++ +V G CK G +  A     EMLR G++PD   Y
Sbjct: 429 GDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTY 488

Query: 492 TTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
           T  +    K GD    ++L +EM + G  P ++TYNVL++GLCKLG ++ A+ LL  M+ 
Sbjct: 489 TMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLN 548

Query: 552 DGFIPDHITYTSIIHA 567
            G +PD ITY +++  
Sbjct: 549 IGVVPDDITYNTLLEG 564



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 120/374 (32%), Positives = 206/374 (55%), Gaps = 3/374 (0%)

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
           G   ++L  G  ++ + +N ++  + ++G + +A  + +E+  R + PT+ ++N LI G 
Sbjct: 226 GFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGY 285

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           CK G + +      +M +    PD+ +Y+ L+   C+   +  A  LFDE+  R L+P  
Sbjct: 286 CKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPND 345

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           V + TLI G  R G++++ ++  + M+++G+ PD++ Y  +VNG CK G+L  AR   + 
Sbjct: 346 VIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDG 405

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M+R+GL+PD+  YTT I G  + GD   A  +++EM   G   D + ++ LV G+CK G 
Sbjct: 406 MIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGR 465

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
           + +A   LR+M+  G  PD +TYT ++ A  + GD + G  L   M   G  P++VTY V
Sbjct: 466 VIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNV 525

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
           L++     G+++ A M    M   G+ P+ ITYN L+ G  R     + Y   I   E G
Sbjct: 526 LLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRY---IQKPEIG 582

Query: 659 ILPNKYTYTILINE 672
           I+ +  +Y  ++NE
Sbjct: 583 IVADLASYKSIVNE 596



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 119/379 (31%), Positives = 208/379 (54%), Gaps = 4/379 (1%)

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
           E++  G    +  +NIL+   CK G +SDA+  F E+ ++++ P ++S+NTL+ GYC+ G
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVG 289

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
           N+ E F L  ++      P V TY+ LI+ LC+   ++ A  L + M  +G++P+ + +T
Sbjct: 290 NLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFT 349

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
            +++G  + G + + +E + +ML KGLQPD   Y T + G  K GD   A  + + M+ +
Sbjct: 350 TLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR 409

Query: 518 GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
           G  PD ITY  L+ G C+ G +E A E+ ++M  +G   D + +++++    + G +   
Sbjct: 410 GLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDA 469

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
                 MLR G+ P  VTYT+++ A   +G  +  F    EMQ  G  P+V+TYN L+NG
Sbjct: 470 ERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNG 529

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           LC+L ++  A  L   M   G++P+  TY  L+  +    N   + + Y +  +  I  D
Sbjct: 530 LCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHAN---SSKRYIQKPEIGIVAD 586

Query: 698 YCTHSALLLKQLDKDYKVH 716
             ++ + ++ +LD+  K H
Sbjct: 587 LASYKS-IVNELDRASKDH 604



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 110/335 (32%), Positives = 180/335 (53%)

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
           + E+L      ++  +N L+  +C+ GNI +A  +FDE+  R+L PTVV++NTLI+G C+
Sbjct: 228 YMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCK 287

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
            G+L+   +LK  M      PDV TY+ ++N  CK   +  A   F+EM ++GL P+   
Sbjct: 288 VGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVI 347

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           +TT I G  + G+        ++ML+KG  PD++ YN LV+G CK G L  A  ++  M+
Sbjct: 348 FTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMI 407

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
             G  PD ITYT++I      GD+    ++   M + G+    V ++ L+      GR+ 
Sbjct: 408 RRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVI 467

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
            A     EM   GI+P+ +TY  +++  C+       + L  +M+ +G +P+  TY +L+
Sbjct: 468 DAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLL 527

Query: 671 NENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           N  C  G  + A  L   ML+  + PD  T++ LL
Sbjct: 528 NGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL 562



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 162/319 (50%)

Query: 387 NTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMIN 446
           + L+  Y   G I +A   F   R       +     L+D + +             +++
Sbjct: 174 DALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILD 233

Query: 447 QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSE 506
            G   +V  + I++N  CK GN+S A++ F+E+ ++ LQP   ++ T I G  K+G+  E
Sbjct: 234 AGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDE 293

Query: 507 AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
            +RL+ +M      PD+ TY+ L++ LCK   ++ A+ L  +M   G IP+ + +T++IH
Sbjct: 294 GFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIH 353

Query: 567 ASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRP 626
                G++   ++ +  ML KGL P +V Y  L++     G L  A      M  +G+RP
Sbjct: 354 GHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRP 413

Query: 627 NVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLY 686
           + ITY  LI+G CR   ++ A  +  +M++ GI  ++  ++ L+   C  G   +A R  
Sbjct: 414 DKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERAL 473

Query: 687 KEMLDREIEPDYCTHSALL 705
           +EML   I+PD  T++ ++
Sbjct: 474 REMLRAGIKPDDVTYTMMM 492


>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 156/558 (27%), Positives = 276/558 (49%), Gaps = 37/558 (6%)

Query: 184  TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
            +K S  ++ + +F +M+ N   PDV   N +I +L   G   +A +++  + E  ++P+ 
Sbjct: 497  SKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTD 556

Query: 244  VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
             TYNT+L    +EG+++E ++LL  M      PN +TYN ++    +NGE+  A  ++  
Sbjct: 557  CTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYS 616

Query: 304  MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
            M   G      SYN ++ G  ++  L EA  +  +M  + +AP  AT   ++    + G 
Sbjct: 617  MTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQM-KKVLAPDYATVCTILPSFVRSGL 675

Query: 364  VSDARHRFFE-MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            + +A H   E +L+ +   D  S ++L+ G  +     ++    + + S  L+   +  +
Sbjct: 676  MKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLS 735

Query: 423  TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
             +I  LC++ +   A +L +   N G+     +Y  ++ G      + +A E F+EM R 
Sbjct: 736  PIIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRL 795

Query: 483  GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
            G  PD F Y   +    K     +  ++QEEM  KG+    +TYN ++ GL K   L+EA
Sbjct: 796  GCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEA 855

Query: 543  NELLRKMVGDGFIPDHITYTSIIHASLE-------------------------------- 570
              L  +++ +GF P   TY  ++   L+                                
Sbjct: 856  INLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNG 915

Query: 571  ---MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
                GD  +  +LF +M+ +G++P + +YTV+I    A GRL     YF ++   G+ P+
Sbjct: 916  YRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPD 975

Query: 628  VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYK 687
            +ITYN LI+GL +  R+++A  L+ DME++GI PN YTY  LI     AG   EA ++Y+
Sbjct: 976  LITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYE 1035

Query: 688  EMLDREIEPDYCTHSALL 705
            E+L +  +P+  T++AL+
Sbjct: 1036 ELLAKGWKPNVFTYNALI 1053



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 140/518 (27%), Positives = 240/518 (46%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           VF+ M R  +  +V     +   +   G    A     +M E GI  +  TYN ++    
Sbjct: 123 VFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLV 182

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K G  +EA+++   M   G  P   TY+VL+  F +  + E   GL+ +M   G++ + +
Sbjct: 183 KSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVY 242

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           SY   I    + G L EA  +  +M   G  P + T  +LI  LC  GR++DA+  F++M
Sbjct: 243 SYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKM 302

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
              +  PD ++Y TLL     SG+      +++ L++      VV+Y   +D LC+ G +
Sbjct: 303 KASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRV 362

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A  + + M  +GI+P   +Y  +++G  K    + A E FN M   G  P+ + +   
Sbjct: 363 DEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLF 422

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I    K G++ +A +  E M +KG  PD++  N +++GL K G L  A  +  ++   G 
Sbjct: 423 INYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGI 482

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            PD+ITYT +I    +  +      +F  M+    +P ++    LI      GR   A+ 
Sbjct: 483 SPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWK 542

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F E++   + P   TYN L+ GL R  ++ +   L   M      PN  TY  +++  C
Sbjct: 543 IFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLC 602

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKD 712
             G    AL +   M      PD  +++ ++   + +D
Sbjct: 603 KNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKED 640



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 231/469 (49%), Gaps = 13/469 (2%)

Query: 96   VLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNM 155
            V+  + ++ R+   F+ + + +  +  D    CTIL   + SGL++ A           +
Sbjct: 632  VMYGLVKEDRLDEAFWMFCQMKKVLAPDYATVCTILPSFVRSGLMKEA-----------L 680

Query: 156  HGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRII 215
            H + + ++     S V    +  L+    K+   E+ +     +  +GLL D    + II
Sbjct: 681  HTVREYILQP--DSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPII 738

Query: 216  KVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCS 275
            + L  +  ++ A E+ +     G+     +YN ++     E  +  A EL  EM+  GC 
Sbjct: 739  RHLCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCD 798

Query: 276  PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
            P+  TY++++    ++  +E    +  +M   G K +  +YN II G  +  +L EA+NL
Sbjct: 799  PDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINL 858

Query: 336  EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
              ++++ G +PT  TY  L+ GL K G + DA   F EML     P+   YN LL GY  
Sbjct: 859  YYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRI 918

Query: 396  SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVIT 455
            +G+  +   LF+ +  + + P + +Y  +ID LC  G L       + + + G+ PD+IT
Sbjct: 919  AGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLIT 978

Query: 456  YTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEML 515
            Y ++++G  K G L  A   +N+M +KG+ P+ + Y + I    K G  +EA ++ EE+L
Sbjct: 979  YNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELL 1038

Query: 516  AKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
            AKG+ P++ TYN L+ G    GS E A     +M+  G  P+  TY  +
Sbjct: 1039 AKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 1087



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 142/563 (25%), Positives = 256/563 (45%), Gaps = 37/563 (6%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           M   G++ +    N +I  L  +GF  +A +VY+ M   G+ P++ TY+ ++ +F K  +
Sbjct: 162 MKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRD 221

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
            +  + LL EM+ RG  PN  +Y + I    + G LE+A  ++R M + G K    +   
Sbjct: 222 AETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTV 281

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATY--------------------------- 351
           +I    + G L +A ++  +M      P   TY                           
Sbjct: 282 LIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADG 341

Query: 352 ---NILIY-----GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF 403
              N++ Y      LC+ GRV +A   F EM +K +IP   SYN+L+ G+ ++     A 
Sbjct: 342 YNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRAL 401

Query: 404 LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
            LF+ +      P   T+   I+   + G+   A +  E M ++GI+PDV+    ++ G 
Sbjct: 402 ELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGL 461

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
            K G L MA+  F+E+   G+ PD   YT  I    K  +  EA ++  EM+     PD+
Sbjct: 462 AKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDV 521

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
           +  N L+  L K G   EA ++  ++      P   TY +++      G ++    L   
Sbjct: 522 LAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEG 581

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           M      P ++TY  ++      G +  A      M + G  P++ +YN ++ GL +  R
Sbjct: 582 MNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEDR 641

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE-MLDREIEPDYCTHS 702
           +D+A+ +F  M++  + P+  T   ++     +G  +EAL   +E +L  + + D  +  
Sbjct: 642 LDEAFWMFCQMKKV-LAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVH 700

Query: 703 ALLLKQLDKDYKVHAVEYLESLT 725
           +L+   L +D    ++E+ E++ 
Sbjct: 701 SLMEGILKRDGTEKSIEFAENIA 723



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 135/527 (25%), Positives = 247/527 (46%), Gaps = 15/527 (2%)

Query: 114 VETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSI 173
           V  + G+  + + +  ++  L++SG  R A  V + +      G++            ++
Sbjct: 161 VMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAA---DGVVP-----------TV 206

Query: 174 KILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRM 233
           +   +L+L + K+   E  + +  +M   G+ P+V +    I+VL   G   +A  + R 
Sbjct: 207 RTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRK 266

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M E G KP +VT   ++   C  G + +A ++ W+M+     P+ VTY  L+     +G+
Sbjct: 267 MEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGD 326

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
                 +   +   G   +  SY   +    + G + EAL++ +EM  +G+ P   +YN 
Sbjct: 327 SRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNS 386

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           LI G  K  R + A   F  M      P+  ++   +  + +SG   +A   ++ ++S+ 
Sbjct: 387 LISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKG 446

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           +VP VV  N ++ GL + G L +A+++   +   GI PD ITYT+M+    K  N   A 
Sbjct: 447 IVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAM 506

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
           + F EM+     PD  A  + I    K G  +EA+++  E+      P   TYN L+ GL
Sbjct: 507 KIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGL 566

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
            + G ++E  +LL  M  + F P+ ITY +++    + G++    D+  +M   G  P L
Sbjct: 567 GREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDL 626

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
            +Y  +++      RL+ AF  F +M+ K + P+  T   ++    R
Sbjct: 627 SSYNTVMYGLVKEDRLDEAFWMFCQMK-KVLAPDYATVCTILPSFVR 672



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 144/488 (29%), Positives = 221/488 (45%), Gaps = 37/488 (7%)

Query: 185  KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
            K   V   L +   M  NG +PD+ + N ++  L       +A  ++  M +  + P   
Sbjct: 603  KNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQMKKV-LAPDYA 661

Query: 245  TYNTMLDSFCKEGEMQEALELLWE-----------------MQG---RGCSPNGVTY--N 282
            T  T+L SF + G M+EAL  + E                 M+G   R  +   + +  N
Sbjct: 662  TVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAEN 721

Query: 283  VLITGF--------------SRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
            +  +G                ++ E   A  L++    LG+ +   SYN +ICG  ++ L
Sbjct: 722  IASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDL 781

Query: 329  LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNT 388
            +  A  L  EM   G  P   TY++++  + K  R+ D      EM  K      ++YNT
Sbjct: 782  IDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNT 841

Query: 389  LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
            ++ G  +S  + EA  L+ +L S    PT  TY  L+DGL + G++E A+ L + M+  G
Sbjct: 842  IISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECG 901

Query: 449  ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
              P+   Y I++NG    G+     E F  M+ +G+ PD  +YT  I      G  ++  
Sbjct: 902  CEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGL 961

Query: 509  RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
               +++   G  PDLITYN+L+HGL K G LEEA  L   M   G  P+  TY S+I   
Sbjct: 962  SYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYL 1021

Query: 569  LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
             + G       ++  +L KG  P + TY  LI  ++  G  E AF  +  M V G RPN 
Sbjct: 1022 GKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNS 1081

Query: 629  ITYNALIN 636
             TY  L N
Sbjct: 1082 STYMQLPN 1089



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 132/520 (25%), Positives = 261/520 (50%), Gaps = 2/520 (0%)

Query: 208 VKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLW 267
            ++CN +++++R +G      +V+ +M    IK ++ T+ T+  +   EG ++ A   L 
Sbjct: 101 TESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALP 160

Query: 268 EMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKG 327
            M+  G   N  TYN LI    ++G   +A  + + M   G+  +  +Y+ ++  + ++ 
Sbjct: 161 VMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRR 220

Query: 328 LLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYN 387
                + L  EM  RGV P + +Y I I  L + GR+ +A     +M  +   PD+++  
Sbjct: 221 DAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNT 280

Query: 388 TLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
            L+   C +G + +A  +F ++++ +  P  VTY TL+D     GD     ++   +   
Sbjct: 281 VLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKAD 340

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
           G   +V++YT  V+  C++G +  A + F+EM +KG+ P +++Y + I+G LK    + A
Sbjct: 341 GYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRA 400

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
             L   M   G  P+  T+ + ++   K G   +A +    M   G +PD +   ++++ 
Sbjct: 401 LELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYG 460

Query: 568 SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
             + G L   + +F+ +   G+SP  +TYT++I   +     + A   F+EM      P+
Sbjct: 461 LAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPD 520

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYK 687
           V+  N+LI+ L +  R ++A+ +F +++E  + P   TY  L+      G  +E ++L +
Sbjct: 521 VLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLE 580

Query: 688 EMLDREIEPDYCTHSALLLKQLDKDYKV-HAVEYLESLTL 726
            M      P+  T++  +L  L K+ +V +A++ L S+T+
Sbjct: 581 GMNSNSFPPNIITYNT-VLDCLCKNGEVNYALDMLYSMTM 619


>gi|12321310|gb|AAG50731.1|AC079041_24 PPR-repeat protein, putative [Arabidopsis thaliana]
          Length = 690

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 172/620 (27%), Positives = 296/620 (47%), Gaps = 43/620 (6%)

Query: 96  VLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNM 155
           VL  +  +P  AL++FRW E    +   +  F TI  +LI +G+   A  V + ++  N 
Sbjct: 75  VLLSLESEPNSALKYFRWAE----ISGKDPSFYTIAHVLIRNGMFDVADKVFDEMI-TNR 129

Query: 156 HGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVF------------------- 196
               +VL G      +   +   L+    +  MV++ L +F                   
Sbjct: 130 GKDFNVL-GSIRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRML 188

Query: 197 ----------------NKMLRNGLLPD-VKNCNRIIKVLRDNGFSVKAREVYRMMGEFGI 239
                           +K+ R G+ P  V     ++  L   G   KA + +R++ E G 
Sbjct: 189 NSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGF 248

Query: 240 KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
           +  IV+ N +L     + +++ A  LL  +   G +PN VT+  LI GF + GE+++A  
Sbjct: 249 RVGIVSCNKVLKGLSVD-QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFD 307

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
           L + M + G++    +Y+ +I GY + G+L     L  + + +GV   +  ++  I    
Sbjct: 308 LFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYV 367

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
           K G ++ A   +  ML + + P++++Y  L+ G C+ G I EAF ++ ++  R + P++V
Sbjct: 368 KSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIV 427

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
           TY++LIDG C+ G+L     L E+MI  G  PDV+ Y ++V+G  K G +  A  F  +M
Sbjct: 428 TYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKM 487

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
           L + ++ +   + + I G  +L    EA ++   M   G  PD+ T+  ++      G L
Sbjct: 488 LGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRL 547

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           EEA  L  +M   G  PD + Y ++I A  +      G  LF+ M R  +S  +    V+
Sbjct: 548 EEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVV 607

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           IH      R+E A  +F+ +    + P+++TYN +I G C LRR+D+A  +F  ++    
Sbjct: 608 IHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPF 667

Query: 660 LPNKYTYTILINENCNAGNW 679
            PN  T TILI+  C    W
Sbjct: 668 GPNTVTLTILIHVLCKIMIW 687



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/358 (24%), Positives = 164/358 (45%), Gaps = 37/358 (10%)

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
           N G+ F +   +R R+L   V  +  L++  CRYG ++ A ++       G++    +  
Sbjct: 128 NRGKDFNVLGSIRDRSLDADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVY 185

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRF-AYTTQIAGELKLGDTSEAYRLQEEMLA 516
            M+N       + +  + F+++ R G++P    A+   +      G+ ++A      ++ 
Sbjct: 186 RMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVME 245

Query: 517 KGF----------------------------------PPDLITYNVLVHGLCKLGSLEEA 542
           +GF                                   P+++T+  L++G CK G ++ A
Sbjct: 246 RGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRA 305

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            +L + M   G  PD I Y+++I    + G L  G  LF+  L KG+   +V ++  I  
Sbjct: 306 FDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDV 365

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
           +   G L  A + +  M  +GI PNV+TY  LI GLC+  RI +A+G++  + + G+ P+
Sbjct: 366 YVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPS 425

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
             TY+ LI+  C  GN +    LY++M+     PD   +  L+     +   +HA+ +
Sbjct: 426 IVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRF 483


>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 624

 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 143/489 (29%), Positives = 238/489 (48%), Gaps = 10/489 (2%)

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
           +++ L   G    A  V   M      P    Y+ +++S C+ G    AL +L  +  +G
Sbjct: 122 VVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKG 181

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII---CGYSEKG--- 327
            + +    N++I      G +++   ++R +   G +    SYN ++   C     G   
Sbjct: 182 STLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVE 241

Query: 328 -LLVEALNLEE---EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDI 383
            L+ E + + E   +M   G  P +  Y  +I G+CK G    A      M    + P++
Sbjct: 242 ELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNV 301

Query: 384 ISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKEN 443
           + YNT+L G C +    +A  L  E+  +N     VT+N L+D  C+ G ++   +L E 
Sbjct: 302 VCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQ 361

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           M+  G +PDVITYT ++NG CK G +  A      M   G +P+  +YT  + G      
Sbjct: 362 MLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTER 421

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
             +A  L   M+ +G  P+ +T+N +++ LCK G +E+A ELL++M+ +G  PD I+Y++
Sbjct: 422 WVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYST 481

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           +I    + G      +L N M+ KG++P ++TY+ +  A A  GR++     F  +Q   
Sbjct: 482 VIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDAT 541

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
           IR + + YNA+I+ LC+ R  D A      M   G +PN+ TYT LI    + G   EA 
Sbjct: 542 IRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQ 601

Query: 684 RLYKEMLDR 692
            L  E+  R
Sbjct: 602 DLLSELCSR 610



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 136/484 (28%), Positives = 232/484 (47%), Gaps = 10/484 (2%)

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
           R+     + P+  TY  ++   C  G + +AL +L EM  R C P    Y+V+I    R+
Sbjct: 105 RLAAAVPVPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRS 164

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
           G    A  ++  +   G  +   + N +I    ++G + E L +  ++   G    + +Y
Sbjct: 165 GGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSY 224

Query: 352 NILIYGLC---KWGRVSD-------ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
           N ++ GLC   +WG V +             +M +    PDI  Y T++ G C+ G+   
Sbjct: 225 NAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEV 284

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           A  +   + S  L P VV YNT++ G+C     E A++L   M  +    D +T+ I+V+
Sbjct: 285 ANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVD 344

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
             C+ G +    E   +ML  G  PD   YTT I G  K G   EA  L + M + G  P
Sbjct: 345 FFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKP 404

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           + I+Y +++ GLC      +A EL+ +M+  G +P+ +T+ +II+   + G + +  +L 
Sbjct: 405 NTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELL 464

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
             ML  G +P L++Y+ +I      G+ E A    + M  KGI PNVITY+++   L R 
Sbjct: 465 KQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALARE 524

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
            RID+   +F ++++  I  +   Y  +I+  C       A+     M+     P+  T+
Sbjct: 525 GRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTY 584

Query: 702 SALL 705
           +AL+
Sbjct: 585 TALI 588



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 139/525 (26%), Positives = 239/525 (45%), Gaps = 54/525 (10%)

Query: 247 NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
           + ++ S C  G   +A+  L      G +   V YN ++ G+ R G++E AR   R    
Sbjct: 56  SALIRSLCVAGRTADAVRAL---DAAGNAAGVVDYNAMVAGYCRVGQVEAAR---RLAAA 109

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG---- 362
           + +  +A++Y P++ G   +G + +AL + +EM +R   P    Y+++I   C+ G    
Sbjct: 110 VPVPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSS 169

Query: 363 --RVSDARH-------------------------RFFEMLRK----NVIPDIISYNTLLY 391
             RV +A H                            EMLRK        DI+SYN +L 
Sbjct: 170 ALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLK 229

Query: 392 GYCRSGNIGEAFLLFDEL----------RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           G C +   G+   L DE+                P +  Y T+IDG+C+ G  EVA ++ 
Sbjct: 230 GLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEIL 289

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
             M + G+ P+V+ Y  ++ G C       A E   EM +K    D   +   +    + 
Sbjct: 290 SRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQN 349

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
           G       L E+ML  G  PD+ITY  +++G CK G ++EA  LL+ M   G  P+ I+Y
Sbjct: 350 GLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISY 409

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
           T ++             +L + M+++G  P  VT+  +I+    +G +E A     +M V
Sbjct: 410 TIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLV 469

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
            G  P++I+Y+ +I+GL +  + ++A  L   M  +GI PN  TY+ +       G   +
Sbjct: 470 NGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDK 529

Query: 682 ALRLYKEMLDREIEPDYCTHSAL---LLKQLDKDYKVHAVEYLES 723
            ++++  + D  I  D   ++A+   L K+ + D  +  + Y+ S
Sbjct: 530 VIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVS 574



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 129/437 (29%), Positives = 203/437 (46%), Gaps = 10/437 (2%)

Query: 193 LLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDS 252
           L V   +   G   D  NCN +I  + D G   +  E+ R +  FG +  IV+YN +L  
Sbjct: 171 LRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKG 230

Query: 253 FCKE---GEMQEAL-------ELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            C     G+++E +       E L +M   GC+P+   Y  +I G  + G  E A  ++ 
Sbjct: 231 LCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILS 290

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M   GLK +   YN ++ G        +A  L  EM  +       T+NIL+   C+ G
Sbjct: 291 RMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNG 350

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            V        +ML    +PD+I+Y T++ G+C+ G I EA +L   + S    P  ++Y 
Sbjct: 351 LVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYT 410

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            ++ GLC       A++L   MI QG LP+ +T+  ++N  CK G +  A E   +ML  
Sbjct: 411 IVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVN 470

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G  PD  +Y+T I G  K G T EA  L   M+ KG  P++ITY+ +   L + G +++ 
Sbjct: 471 GCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKV 530

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            ++   +       D + Y ++I +  +  +     D    M+  G  P   TYT LI  
Sbjct: 531 IQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKG 590

Query: 603 HAARGRLELAFMYFSEM 619
            A+ G L  A    SE+
Sbjct: 591 LASEGLLCEAQDLLSEL 607



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 110/366 (30%), Positives = 191/366 (52%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
             ++M ++G  PD++    II  +   G    A E+   M  +G+KP++V YNT+L   C
Sbjct: 253 ALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGIC 312

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
                ++A ELL EM  + C  + VT+N+L+  F +NG +++   L+  ML+ G      
Sbjct: 313 SADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVI 372

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +Y  +I G+ ++GL+ EA+ L + M + G  P   +Y I++ GLC   R  DA      M
Sbjct: 373 TYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRM 432

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           +++  +P+ +++NT++   C+ G + +A  L  ++      P +++Y+T+IDGL + G  
Sbjct: 433 IQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKT 492

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           E A +L   MIN+GI P+VITY+ M     + G +    + F+ +    ++ D   Y   
Sbjct: 493 EEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAV 552

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I+   K  +T  A      M++ G  P+  TY  L+ GL   G L EA +LL ++     
Sbjct: 553 ISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSELCSRRA 612

Query: 555 IPDHIT 560
           +  H+T
Sbjct: 613 VRKHLT 618



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 102/392 (26%), Positives = 174/392 (44%), Gaps = 13/392 (3%)

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           G A  +  YN ++ G C+ G+V  AR     +    V P+  +Y  ++ G C  G I +A
Sbjct: 79  GNAAGVVDYNAMVAGYCRVGQVEAARRLAAAV---PVPPNAYTYFPVVRGLCGRGRIADA 135

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
             + DE+ SR+ VP    Y+ +I+  CR G    A ++ E +  +G   D     +++N 
Sbjct: 136 LAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINA 195

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG---ELKLGDTSE-------AYRLQE 512
            C  G +    E   ++   G + D  +Y   + G     + GD  E        +    
Sbjct: 196 ICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALS 255

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           +M   G  PD+  Y  ++ G+CK G  E ANE+L +M   G  P+ + Y +++       
Sbjct: 256 QMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSAD 315

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
              +  +L   M +K      VT+ +L+      G ++       +M   G  P+VITY 
Sbjct: 316 RWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYT 375

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
            +ING C+   ID+A  L  +M   G  PN  +YTI++   C+   W +A  L   M+ +
Sbjct: 376 TVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQ 435

Query: 693 EIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
              P+  T + ++     K     A+E L+ +
Sbjct: 436 GCLPNPVTFNTIINFLCKKGLVEQAIELLKQM 467



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 124/265 (46%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
            ++L+  + +  +V++ + +  +ML +G +PDV     +I      G   +A  + + M 
Sbjct: 339 FNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMP 398

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
             G KP+ ++Y  +L   C      +A EL+  M  +GC PN VT+N +I    + G +E
Sbjct: 399 SCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVE 458

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
           QA  L++ ML  G      SY+ +I G  + G   EAL L   M+ +G+ P + TY+ + 
Sbjct: 459 QAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMA 518

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
           + L + GR+      F  +    +  D + YN ++   C+      A      + S   +
Sbjct: 519 FALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCM 578

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQL 440
           P   TY  LI GL   G L  AQ L
Sbjct: 579 PNESTYTALIKGLASEGLLCEAQDL 603


>gi|224056475|ref|XP_002298874.1| predicted protein [Populus trichocarpa]
 gi|222846132|gb|EEE83679.1| predicted protein [Populus trichocarpa]
          Length = 948

 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 140/469 (29%), Positives = 232/469 (49%), Gaps = 1/469 (0%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G  P+IVTYNT+L+  CK+G  + A +L+  M+ +G   +  TYN+LI    +N    + 
Sbjct: 5   GYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNRSAKG 64

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L++ M K  +  +  +YN +I G  ++  +  A  +  EM+   ++P   TYNILI G
Sbjct: 65  YLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILIDG 124

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
            C  G    A      M  K + PD ++Y  LL G  +      A  L + +R   +V  
Sbjct: 125 HCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVG 184

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
              Y  +IDGLC++G L+ + QL + M   G  PD+IT+++++NG CK G +  A+E   
Sbjct: 185 YRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVIC 244

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           +M + GL P+   Y T I    K GD +EA+R    M   G   D    NVL+  LC+ G
Sbjct: 245 KMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAG 304

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            + EA + +R M      P+ IT+  II+    +GD  +   +F+ M++ G  P+  TY 
Sbjct: 305 RVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYG 364

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
            L+      G L  A     ++       +   YN +++  C+  ++  A  LF +M + 
Sbjct: 365 SLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQF 424

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDR-EIEPDYCTHSALL 705
            +LP+ +TY I++      G    AL  +++ L R  + P+   +++L 
Sbjct: 425 NVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLF 473



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 160/548 (29%), Positives = 250/548 (45%), Gaps = 37/548 (6%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           + ++M   G+  DV   N +I  L  N  S K   + + M +  I P+  TYNT+++   
Sbjct: 32  LIDRMESKGIEADVCTYNMLIDDLCKNNRSAKGYLLLKKMRKRMIAPNEFTYNTLINGLM 91

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK---- 310
           KE ++  A  +  EM     SPN VTYN+LI G    G  EQA  L+  M   GL+    
Sbjct: 92  KERKIGGATRVFNEMLMLNLSPNRVTYNILIDGHCDCGNFEQALRLLDVMEAKGLRPDEV 151

Query: 311 -------------------------------VSAHSYNPIICGYSEKGLLVEALNLEEEM 339
                                          V   +Y  +I G  + GLL E+L L + M
Sbjct: 152 NYGALLSGLSKLAKFDIAKSLMERIRMSGMVVGYRAYTAMIDGLCKHGLLDESLQLLDMM 211

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
              G +P + T+++LI G CK G++ +A+    +M +  + P+ + Y TL+Y  C+ G+I
Sbjct: 212 FKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAGLAPNYVIYATLIYNSCKKGDI 271

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
            EAF  +  +            N LI  LCR G +  A+    +M    + P+ IT+  +
Sbjct: 272 TEAFRNYATMTRTGHDVDYFICNVLISSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCI 331

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           +NG   +G+   A   F+EM++ G  P  F Y + + G  K G+  EA +L  ++     
Sbjct: 332 INGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPA 391

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
             D   YN ++   CK G L +A  L  +MV    +PD  TY  I+      G +     
Sbjct: 392 AVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALL 451

Query: 580 LFNNMLRKG-LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
            F   L +G LSP  V YT L       G+   A   + EM+ KGI P+ I  NA+++G 
Sbjct: 452 FFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGY 511

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
            R+ ++++   LFI M+   + P+  TY IL++      +  +  + Y  M    I PD 
Sbjct: 512 SRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDK 571

Query: 699 CT-HSALL 705
            T HS +L
Sbjct: 572 LTCHSIIL 579



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 147/508 (28%), Positives = 247/508 (48%), Gaps = 37/508 (7%)

Query: 222 GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY 281
           G ++KA  ++  M + G  PS  TY ++L   CK G ++EA +LL+++     + +   Y
Sbjct: 339 GDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIY 398

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
           N +++   + G+L  A  L  +M++  +   +H+Y  I+ G S KG +V AL   E+ + 
Sbjct: 399 NTILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALA 458

Query: 342 RG-VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
           RG ++P    Y  L  GL K G+ + A + + EM  K + PD I+ N +L GY R G + 
Sbjct: 459 RGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKME 518

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           +   LF +++S +L P++ TYN L+ G  +  DL    +    M   GI PD +T   ++
Sbjct: 519 KVEKLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSII 578

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
            G CK G L +  +   +M+ +    D+      I    +     +A+ L       G  
Sbjct: 579 LGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGII 638

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLR---RG 577
           PD+ TYN +  GL +  +L E++ LL  M+  G  P    Y S+I+    MGD++   R 
Sbjct: 639 PDVNTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFRL 698

Query: 578 RD--------------------------------LFNNMLRKGLSPTLVTYTVLIHAHAA 605
           +D                                + + ML+K L PT+ T+T L+H    
Sbjct: 699 KDEMEAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMHMLCK 758

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
           + +L  A     +M + G++ +V+ YN LI+GLC       A+ L+ +M+E G+ PN  T
Sbjct: 759 KAKLSEALKLRGKMALYGVKLDVVAYNVLISGLCADGDALAAFNLYEEMKERGLWPNTTT 818

Query: 666 YTILINE-NCNAGNWQEALRLYKEMLDR 692
           Y  LI+  + N G  +E L +Y E  ++
Sbjct: 819 YCTLIDAISTNEGEVEERLLVYLEQFEK 846



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 145/564 (25%), Positives = 257/564 (45%), Gaps = 36/564 (6%)

Query: 194 LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
           L+  KM +  + P+    N +I  L        A  V+  M    + P+ VTYN ++D  
Sbjct: 66  LLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILIDGH 125

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           C  G  ++AL LL  M+ +G  P+ V Y  L++G S+  + + A+ L+  +   G+ V  
Sbjct: 126 CDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVGY 185

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
            +Y  +I G  + GLL E+L L + M   G +P + T+++LI G CK G++ +A+    +
Sbjct: 186 RAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICK 245

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M +  + P+ + Y TL+Y  C+ G+I EAF  +  +            N LI  LCR G 
Sbjct: 246 MFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGR 305

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           +  A+    +M    + P+ IT+  ++NG   +G+   A   F+EM++ G  P  F Y +
Sbjct: 306 VAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGS 365

Query: 494 QIAGELKLGDTSEA----YRLQE-------------------------------EMLAKG 518
            + G  K G+  EA    Y+L                                 EM+   
Sbjct: 366 LLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFN 425

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI-PDHITYTSIIHASLEMGDLRRG 577
             PD  TY +++ GL + G +  A     K +  G + P+ + YTS+     ++G     
Sbjct: 426 VLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAA 485

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
             ++  M  KG++P  +    ++  ++  G++E     F +MQ   + P++ TYN L++G
Sbjct: 486 SYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHG 545

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
             + + + +    +  M   GI P+K T   +I   C +G      ++ K+M+  +   D
Sbjct: 546 YSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVD 605

Query: 698 YCTHSALLLKQLDKDYKVHAVEYL 721
             T + L+    + D    A + L
Sbjct: 606 QLTLNMLITNSCETDKMGKAFDLL 629



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 136/540 (25%), Positives = 250/540 (46%), Gaps = 36/540 (6%)

Query: 202 NGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQE 261
           +G +P +   N I+      G    A ++   M   GI+  + TYN ++D  CK     +
Sbjct: 4   SGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNRSAK 63

Query: 262 ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC 321
              LL +M+ R  +PN  TYN LI G  +  ++  A  +  +ML L L  +  +YN +I 
Sbjct: 64  GYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILID 123

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
           G+ + G   +AL L + M  +G+ P    Y  L+ GL K  +   A+     +    ++ 
Sbjct: 124 GHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVV 183

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
              +Y  ++ G C+ G + E+  L D +      P ++T++ LI+G C+ G ++ A+++ 
Sbjct: 184 GYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVI 243

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG------------------ 483
             M   G+ P+ + Y  ++  SCK G+++ A   +  M R G                  
Sbjct: 244 CKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRA 303

Query: 484 -----------------LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
                            L P+   +   I G   LGD  +A+ + +EM+  G  P   TY
Sbjct: 304 GRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTY 363

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
             L+ GLCK G+L EA +LL K+       D   Y +I+  + + G L     LF  M++
Sbjct: 364 GSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQ 423

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG-IRPNVITYNALINGLCRLRRID 645
             + P   TY +++   + +G++  A ++F +   +G + PN + Y +L +GL ++ + +
Sbjct: 424 FNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSN 483

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            A  ++ +ME +GI P+      +++     G  ++  +L+ +M    + P   T++ LL
Sbjct: 484 AASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILL 543



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 129/443 (29%), Positives = 215/443 (48%), Gaps = 35/443 (7%)

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +YN I+    +KG    A +L + M ++G+   + TYN+LI  LCK  R +       +M
Sbjct: 12  TYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNRSAKGYLLLKKM 71

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
            ++ + P+  +YNTL+ G  +   IG A  +F+E+   NL P  VTYN LIDG C  G+ 
Sbjct: 72  RKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILIDGHCDCGNF 131

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           E A +L + M  +G+ PD + Y  +++G  K+    +A+     +   G+     AYT  
Sbjct: 132 EQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVGYRAYTAM 191

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I G  K G   E+ +L + M   G  PD+IT++VL++G CK G ++ A E++ KM   G 
Sbjct: 192 IDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAGL 251

Query: 555 IPDHITYTSIIHASLEMGDL-----------RRGRD--------LFNNMLRKG------- 588
            P+++ Y ++I+ S + GD+           R G D        L +++ R G       
Sbjct: 252 APNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGRVAEAED 311

Query: 589 ---------LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
                    L+P  +T+  +I+ +   G    AF  F EM   G  P+  TY +L+ GLC
Sbjct: 312 FMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLC 371

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
           +   + +A  L   +       +   Y  +++E C  G   +A+ L+ EM+   + PD  
Sbjct: 372 KGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSH 431

Query: 700 THSALLLKQLDKDYKVHAVEYLE 722
           T++ +L     K   V A+ + E
Sbjct: 432 TYAIILAGLSRKGKMVPALLFFE 454



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 131/480 (27%), Positives = 222/480 (46%), Gaps = 15/480 (3%)

Query: 124 EFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIY 183
            F + ++L+ L + G LR A  ++       +H I          + V   I + +L   
Sbjct: 360 HFTYGSLLKGLCKGGNLREAKKLL-----YKLHHI---------PAAVDTNIYNTILSET 405

Query: 184 TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMGEFGIKPS 242
            K+  +   + +F +M++  +LPD      I+  L   G  V A   + + +    + P+
Sbjct: 406 CKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPN 465

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
            V Y ++ D   K G+   A  +  EM+ +G +P+ +  N ++ G+SR G++E+   L  
Sbjct: 466 KVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFI 525

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M    L  S  +YN ++ GYS+K  L++       M   G++P   T + +I GLCK G
Sbjct: 526 KMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSG 585

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            +        +M+ ++ + D ++ N L+   C +  +G+AF L +      ++P V TYN
Sbjct: 586 MLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTYN 645

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            +  GL R   L  +  L  +M+ +GI P    Y  ++NG C+MG++  A    +EM   
Sbjct: 646 AIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEAI 705

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G+     A +  + G  + G   EA  + + ML K   P + T+  L+H LCK   L EA
Sbjct: 706 GVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMHMLCKKAKLSEA 765

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            +L  KM   G   D + Y  +I      GD     +L+  M  +GL P   TY  LI A
Sbjct: 766 LKLRGKMALYGVKLDVVAYNVLISGLCADGDALAAFNLYEEMKERGLWPNTTTYCTLIDA 825


>gi|218191262|gb|EEC73689.1| hypothetical protein OsI_08260 [Oryza sativa Indica Group]
          Length = 595

 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 146/510 (28%), Positives = 248/510 (48%), Gaps = 51/510 (10%)

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           + YN ++D  CKE  + EA +LL     +G +P+   Y+ LI  + + G L +A      
Sbjct: 1   MAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEA 60

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M+  G++ + H  + ++  + + G+  E +    +    G+      YNI +   CK G 
Sbjct: 61  MVSHGIETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGN 120

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           +++A     EM    + PD I Y  L+ GYC  G +  A  +F+E+   N+ P +VTYN 
Sbjct: 121 MNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNI 180

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           L  G C+ G +     L + M +QG+ P+ +TY I + G C+ GNLS A   FN +  KG
Sbjct: 181 LASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKG 240

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           +      Y++ + G L  G T  AY L   +  +G   D  + + L++ LC++G+++ A+
Sbjct: 241 IDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGAS 300

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
            + + M+    +PD I+Y+ +I    + GD+ +    F++M+++GLS  ++ YT+L++ +
Sbjct: 301 NVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGY 360

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVIT--------------------------------- 630
              GRL+ A   F +M   GI+P+VI                                  
Sbjct: 361 CKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANH 420

Query: 631 ------------------YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
                             Y  LI+G C+   + +A  LF +M ++G+ P+ Y YT LIN 
Sbjct: 421 NKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALING 480

Query: 673 NCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
            C+ G   +A  L +EM+D+ IEPD  T S
Sbjct: 481 YCSQGEISKAEDLLQEMIDKGIEPDELTFS 510



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 136/455 (29%), Positives = 239/455 (52%), Gaps = 20/455 (4%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
           +  M+ +G+  +    + +++  R  G + +    +    + G+    V YN  +D++CK
Sbjct: 58  YEAMVSHGIETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYCK 117

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
            G M EA++LL EM+  G +P+ + Y  LI G+   GE++ A+ +  +MLK  ++    +
Sbjct: 118 NGNMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVT 177

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           YN +  G+ + GL++E  +L + M  +G+ P   TY I I G C+ G +S+A   F  + 
Sbjct: 178 YNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVE 237

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL-RSRNLVPTVVTYNTLIDGLCRYGDL 434
            K +    + Y++++ GY  SG    A++LF  + R  NLV    + + LI+ LCR G++
Sbjct: 238 EKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDH-FSCSKLINDLCRVGNV 296

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A  + + M+   ++PDVI+Y+ +++  C+ G++  A  +F++M+++GL  D   YT  
Sbjct: 297 QGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTIL 356

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA------------ 542
           + G  K G   EA +L  +M   G  PD+I Y VL+ G  K  +L++             
Sbjct: 357 MNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLK-ETLQQGWEGIAKERRSFL 415

Query: 543 -----NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
                N+LL  M      PD   YT +I    +   L   R+LF+ ML+KGL+P    YT
Sbjct: 416 LRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYT 475

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
            LI+ + ++G +  A     EM  KGI P+ +T++
Sbjct: 476 ALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFS 510



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 137/418 (32%), Positives = 213/418 (50%), Gaps = 26/418 (6%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK-----ARE 229
           I ++ +  Y K   + + + + N+M   GL PD     +I      NG+ +K     A++
Sbjct: 107 IYNIAMDTYCKNGNMNEAVKLLNEMKCGGLTPD-----KIHYTCLINGYCLKGEMQNAQQ 161

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           V+  M +  I+P IVTYN +   FCK G + E  +LL  M  +G  PN +TY + I GF 
Sbjct: 162 VFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFC 221

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           R G L +A  L   + + G+      Y+ ++CGY   G    A  L   +  +G      
Sbjct: 222 RGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHF 281

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           + + LI  LC+ G V  A +    ML  NV+PD+ISY+ L+  YC++G++ +A L F ++
Sbjct: 282 SCSKLINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDM 341

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK---- 465
             R L   V+ Y  L++G C+ G L+ A QL   M N GI PDVI YT++++G  K    
Sbjct: 342 VQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQ 401

Query: 466 MGNLSMAREFFNEMLRKG------------LQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
            G   +A+E  + +LR              ++PD   YT  I G+ K     EA  L +E
Sbjct: 402 QGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDE 461

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
           ML KG  PD   Y  L++G C  G + +A +LL++M+  G  PD +T++ +  A  E+
Sbjct: 462 MLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSEVNIADEEL 519



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 141/483 (29%), Positives = 230/483 (47%), Gaps = 16/483 (3%)

Query: 201 RNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQ 260
           R G  PDV   + +I+     G  +KA + Y  M   GI+ +    + +L  F K G   
Sbjct: 28  RQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTS 87

Query: 261 EALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII 320
           E +    + +  G   + V YN+ +  + +NG + +A  L+ +M   GL      Y  +I
Sbjct: 88  EVIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKCGGLTPDKIHYTCLI 147

Query: 321 CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
            GY  KG +  A  + EEM+   + P + TYNIL  G CK G V +       M  + + 
Sbjct: 148 NGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLE 207

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           P+ ++Y   + G+CR GN+ EA +LF+ +  + +    V Y++++ G    G  + A  L
Sbjct: 208 PNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYML 267

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
              +  QG L D  + + ++N  C++GN+  A      ML   + PD  +Y+  I+   +
Sbjct: 268 FVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQ 327

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
            GD  +A+    +M+ +G   D+I Y +L++G CK G L+EA +L  +M   G  PD I 
Sbjct: 328 NGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIA 387

Query: 561 YTSIIHASLE---------MGDLRRG-------RDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           YT ++   L+         +   RR          L ++M    + P +  YTVLI    
Sbjct: 388 YTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKC 447

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
               L  A   F EM  KG+ P+   Y ALING C    I +A  L  +M ++GI P++ 
Sbjct: 448 KAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDEL 507

Query: 665 TYT 667
           T++
Sbjct: 508 TFS 510



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 121/264 (45%)

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
           + Y ++++G CK   L  A +      R+G  PD + Y+  I    K+G+  +A    E 
Sbjct: 1   MAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEA 60

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           M++ G   +    + L+    KLG   E      K    G   D + Y   +    + G+
Sbjct: 61  MVSHGIETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGN 120

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
           +     L N M   GL+P  + YT LI+ +  +G ++ A   F EM    I P+++TYN 
Sbjct: 121 MNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNI 180

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
           L +G C+   + + + L   M ++G+ PN  TY I I   C  GN  EA  L+  + ++ 
Sbjct: 181 LASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKG 240

Query: 694 IEPDYCTHSALLLKQLDKDYKVHA 717
           I+     +S+++   L   +  HA
Sbjct: 241 IDHIEVMYSSMVCGYLLSGWTDHA 264



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 78/174 (44%), Gaps = 18/174 (10%)

Query: 162 LIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDV------------- 208
           ++  GLS  + + +  +L+  Y K   +++   +F +M   G+ PDV             
Sbjct: 341 MVQRGLS--IDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKE 398

Query: 209 ---KNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
              +    I K  R         ++   M +  I+P +  Y  ++D  CK   + EA EL
Sbjct: 399 TLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEAREL 458

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI 319
             EM  +G +P+   Y  LI G+   GE+ +A  L+++M+  G++    +++ +
Sbjct: 459 FDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSEV 512


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 154/540 (28%), Positives = 253/540 (46%), Gaps = 48/540 (8%)

Query: 191 QCLLVFNKMLRNGLLPDVKNCNRIIK---VLRDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
           + L +   M+R G  PDV  C ++IK    LR+   +V+  E+    G+    P +  YN
Sbjct: 107 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ----PDVFAYN 162

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
            +++ FCK   + +A  +L  M+ +  SP+ VTYN++I      G+L+           L
Sbjct: 163 ALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLD-----------L 211

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
            LKV                     LN   ++++    PT+ TY ILI      G V +A
Sbjct: 212 ALKV---------------------LN---QLLSDNCQPTVITYTILIEATMLEGGVDEA 247

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
                EML + + PD+ +YNT++ G C+ G +  AF +   L  +   P V++YN L+  
Sbjct: 248 LKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRA 307

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           L   G  E  ++L   M ++   P+V+TY+I++   C+ G +  A      M  KGL PD
Sbjct: 308 LLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPD 367

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
            ++Y   IA   + G    A    E M++ G  PD++ YN ++  LCK G  ++A E+  
Sbjct: 368 AYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFG 427

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
           K+   G  P+  +Y ++  A    GD  R   +   M+  G+ P  +TY  +I      G
Sbjct: 428 KLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREG 487

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
            ++ AF    +M+     P+V+TYN ++ G C+  RI+ A  +   M   G  PN+ TYT
Sbjct: 488 MVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYT 547

Query: 668 ILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLG 727
           +LI     AG   EA+ L  +++  +   +Y        K+L + + +  V    S T G
Sbjct: 548 VLIEGIGFAGYRAEAMELANDLVRIDAISEYS------FKRLHRTFPLLNVLQRSSQTFG 601



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 135/471 (28%), Positives = 230/471 (48%), Gaps = 1/471 (0%)

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           C+ G   E+L LL  M  +G +P+ +    LI GF     + +A  ++  + K G +   
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
            +YN +I G+ +   + +A  + + M ++  +P   TYNI+I  LC  G++  A     +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           +L  N  P +I+Y  L+      G + EA  L DE+ SR L P + TYNT+I G+C+ G 
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           ++ A ++  N+  +G  PDVI+Y I++      G      +   +M  +   P+   Y+ 
Sbjct: 279 VDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            I    + G   EA  L + M  KG  PD  +Y+ L+   C+ G L+ A E L  M+ DG
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
            +PD + Y +++    + G   +  ++F  +   G SP   +Y  +  A  + G    A 
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINEN 673
               EM   GI P+ ITYN++I+ LCR   +D+A+ L +DM      P+  TY I++   
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGF 518

Query: 674 CNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           C A   ++A+ + + M+     P+  T++ L+       Y+  A+E    L
Sbjct: 519 CKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 136/254 (53%), Gaps = 2/254 (0%)

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
           SC+ GN   +      M+RKG  PD    T  I G   L +  +A R+  E+L K   PD
Sbjct: 99  SCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPD 157

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
           +  YN L++G CK+  +++A  +L +M    F PD +TY  +I +    G L     + N
Sbjct: 158 VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLN 217

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
            +L     PT++TYT+LI A    G ++ A     EM  +G++P++ TYN +I G+C+  
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHS 702
            +D+A+ +  ++E +G  P+  +Y IL+    N G W+E  +L  +M   + +P+  T+S
Sbjct: 278 MVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337

Query: 703 ALLLKQLDKDYKVH 716
            +L+  L +D K+ 
Sbjct: 338 -ILITTLCRDGKIE 350



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/327 (26%), Positives = 158/327 (48%), Gaps = 14/327 (4%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G+K D F + TI+  + + G++  A+ +V            ++ + G     +S  IL  
Sbjct: 258 GLKPDMFTYNTIIRGMCKEGMVDRAFEMVR-----------NLELKGSEPDVISYNILLR 306

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
            LL   K    E+   +  KM      P+V   + +I  L  +G   +A  + ++M E G
Sbjct: 307 ALLNQGKWEEGEK---LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           + P   +Y+ ++ +FC+EG +  A+E L  M   GC P+ V YN ++    +NG+ +QA 
Sbjct: 364 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 423

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            +   + ++G   ++ SYN +       G  + AL++  EM++ G+ P   TYN +I  L
Sbjct: 424 EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCL 483

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C+ G V +A     +M      P +++YN +L G+C++  I +A  + + +      P  
Sbjct: 484 CREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNE 543

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMI 445
            TY  LI+G+   G    A +L  +++
Sbjct: 544 TTYTVLIEGIGFAGYRAEAMELANDLV 570



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 108/206 (52%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           D L+  + ++  ++  +     M+ +G LPD+ N N ++  L  NG + +A E++  +GE
Sbjct: 372 DPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGE 431

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            G  P+  +YNTM  +    G+   AL ++ EM   G  P+ +TYN +I+   R G +++
Sbjct: 432 VGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDE 491

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  L+ DM       S  +YN ++ G+ +   + +A+N+ E MV  G  P   TY +LI 
Sbjct: 492 AFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIE 551

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPD 382
           G+   G  ++A     +++R + I +
Sbjct: 552 GIGFAGYRAEAMELANDLVRIDAISE 577



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 1/142 (0%)

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           I H S   G+      L   M+RKG +P ++  T LI        +  A      ++  G
Sbjct: 95  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
            +P+V  YNALING C++ RID A  +   M  +   P+  TY I+I   C+ G    AL
Sbjct: 155 -QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213

Query: 684 RLYKEMLDREIEPDYCTHSALL 705
           ++  ++L    +P   T++ L+
Sbjct: 214 KVLNQLLSDNCQPTVITYTILI 235


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 140/462 (30%), Positives = 233/462 (50%), Gaps = 6/462 (1%)

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
           SI ++N +L    K     +   L  +M   G  P+ +T N+LI        + +    +
Sbjct: 90  SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAM 149

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
             +++ G      ++  +I G   +  ++EA  L   M   G  P + TY  LI GLC  
Sbjct: 150 AGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCAL 209

Query: 362 GRVSDARHRFFEMLRK------NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
           G ++ A     EML        N  P++ISY+ ++ G C+ GN  EA  LF+E+  + + 
Sbjct: 210 GNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQ 269

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P VVT++ LID LC+ G +  A++L E MI  GI+P++ TYT ++ G C +G+L+ A+E 
Sbjct: 270 PNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKEL 329

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
           F  M  KG +PD  +Y   I G  K     EA +L  EML  G  PD+ T  VL+  L  
Sbjct: 330 FVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFL 389

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
            G +++A EL R +       D       +    + G +     LFN +    +   + T
Sbjct: 390 AGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIET 449

Query: 596 YTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDME 655
           +  LI      G+LE A+  F ++  +GI+P+ + Y+++I+G C+  ++D+A  LF  ME
Sbjct: 450 FGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKME 509

Query: 656 EEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           E G  P+  TY+IL+     +   ++ ++L   M+++++ PD
Sbjct: 510 ENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPD 551



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 149/494 (30%), Positives = 240/494 (48%), Gaps = 20/494 (4%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVL-----RDNGFSVK 226
           SI   + LL    K     Q   ++ +M   GL PD+   N +I  L      + G +  
Sbjct: 90  SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAM 149

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A  + R     G  P +VT+ T++   C E  + EA +L   MQ  GC+PN VTY  LI 
Sbjct: 150 AGIMRR-----GYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIK 204

Query: 287 GFSRNGELEQARGLIRDMLK------LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV 340
           G    G +  A    ++ML          + +  SY+ II G  + G   EA+ L  EMV
Sbjct: 205 GLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMV 264

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
            +GV P + T+++LI  LCK G+V  A+     M++  ++P++ +Y +L+ G+C  G++ 
Sbjct: 265 DQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLN 324

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
            A  LF  + S+   P V++YN LI+G C+   +E A +L   M++ G+ PDV T  +++
Sbjct: 325 SAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLL 384

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
                 G +  A+E F  +    +  D       + G  K G   EA +L  E+ +    
Sbjct: 385 KALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMK 444

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
            D+ T+  L+ GLCK G LE A EL  K+  +G  PD + Y+S+IH   + G + +   L
Sbjct: 445 LDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANIL 504

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
           F  M   G SP L+TY++L+       +LE        M  K + P+   Y  + + +C+
Sbjct: 505 FQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCK 564

Query: 641 LRRIDQAYGLFIDM 654
               D+ Y  ++D+
Sbjct: 565 ----DEKYKEWLDL 574



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 127/432 (29%), Positives = 224/432 (51%), Gaps = 6/432 (1%)

Query: 280 TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
           ++N L+ G ++     Q   L + M   GL     + N +I        + E L     +
Sbjct: 93  SFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGI 152

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
           + RG  P + T+  LI GLC   R+ +A   F  M +    P++++Y TL+ G C  GNI
Sbjct: 153 MRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNI 212

Query: 400 GEAFLLFDELRSR------NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
             A     E+ +       N  P V++Y+ +IDGLC+ G+ E A  L   M++QG+ P+V
Sbjct: 213 NIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNV 272

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
           +T++++++  CK G +  A++    M++ G+ P+ F YT+ I G   +GD + A  L   
Sbjct: 273 VTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVS 332

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           M +KG+ PD+I+YN+L++G CK   +EEA +L  +M+  G  PD  T   ++ A    G 
Sbjct: 333 MPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGK 392

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
           +   ++LF  +    +   L    + +      G +  A   F+E++   ++ ++ T+  
Sbjct: 393 VDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGC 452

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
           LI+GLC+  +++ A+ LF  + EEGI P+   Y+ +I+  C  G   +A  L+++M +  
Sbjct: 453 LIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENG 512

Query: 694 IEPDYCTHSALL 705
             PD  T+S L+
Sbjct: 513 CSPDLITYSILM 524



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 139/505 (27%), Positives = 244/505 (48%), Gaps = 11/505 (2%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V Q    F+ M+R+     + + NR++  L       +   +Y+ M   G+ P ++T N 
Sbjct: 77  VTQAHQFFDLMMRS-----IFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNI 131

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++  C    + E L  +  +  RG  P+ VT+  LI G      + +A  L   M KLG
Sbjct: 132 LINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLG 191

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR------GVAPTLATYNILIYGLCKWG 362
              +  +Y  +I G    G +  AL   +EM+           P + +Y+I+I GLCK G
Sbjct: 192 CTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVG 251

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
              +A   F EM+ + V P++++++ L+   C+ G + +A  L + +    +VP + TY 
Sbjct: 252 NWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYT 311

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           +LI G C  GDL  A++L  +M ++G  PDVI+Y +++NG CK   +  A + FNEML  
Sbjct: 312 SLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHV 371

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G+ PD       +      G   +A  L   +     P DL    + + GLCK G + EA
Sbjct: 372 GMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEA 431

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            +L  ++       D  T+  +I    + G L    +LF  +  +G+ P  + Y+ +IH 
Sbjct: 432 MKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHG 491

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
              +G+++ A + F +M+  G  P++ITY+ L+ G     ++++   L   M E+ + P+
Sbjct: 492 FCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPD 551

Query: 663 KYTYTILINENCNAGNWQEALRLYK 687
              Y I+ +  C    ++E L L +
Sbjct: 552 DGIYAIVEDMVCKDEKYKEWLDLLQ 576



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 116/354 (32%), Positives = 184/354 (51%), Gaps = 6/354 (1%)

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
           P+V + + II  L   G   +A  ++  M + G++P++VT++ ++D  CKEG++ +A +L
Sbjct: 235 PNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKL 294

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           L  M   G  PN  TY  LI GF   G+L  A+ L   M   G +    SYN +I GY +
Sbjct: 295 LEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCK 354

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP-DII 384
              + EA+ L  EM+  G+ P + T  +L+  L   G+V DA+   F +++   +P D+ 
Sbjct: 355 TLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAK-ELFRVIKPYAMPKDLC 413

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
                L G C++G I EA  LF+EL S N+   + T+  LIDGLC+ G LE A +L E +
Sbjct: 414 ICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKL 473

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
             +GI PD + Y+ M++G CK G +  A   F +M   G  PD   Y+  + G  +    
Sbjct: 474 YEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKL 533

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
            +  +L   M+ K   PD   Y ++   +CK    +E  +LL++     F+  H
Sbjct: 534 EKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLLQRF----FVQKH 583



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 120/250 (48%), Gaps = 48/250 (19%)

Query: 464 CKMGNLSM--AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
           CK G++S+  A +FF+ M+R       F++   +AG  K+   S+ + L ++M   G  P
Sbjct: 70  CKTGSISVTQAHQFFDLMMR-----SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWP 124

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           DL+T N+L++ LC +  +   NE L  M G                              
Sbjct: 125 DLLTLNILINCLCNVNRI---NEGLAAMAG------------------------------ 151

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
             ++R+G  P +VT+T LI       R+  A   F  MQ  G  PNV+TY  LI GLC L
Sbjct: 152 --IMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCAL 209

Query: 642 RRIDQAYGLFIDMEEE------GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIE 695
             I+ A     +M  +         PN  +Y+I+I+  C  GNW+EA+ L+ EM+D+ ++
Sbjct: 210 GNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQ 269

Query: 696 PDYCTHSALL 705
           P+  T S L+
Sbjct: 270 PNVVTFSVLI 279


>gi|115447573|ref|NP_001047566.1| Os02g0644600 [Oryza sativa Japonica Group]
 gi|49387609|dbj|BAD25805.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|49388661|dbj|BAD25796.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113537097|dbj|BAF09480.1| Os02g0644600 [Oryza sativa Japonica Group]
          Length = 526

 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 248/512 (48%), Gaps = 51/512 (9%)

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           + YN ++D  CKE  + EA +LL     +G +P+   Y+ LI  + + G L +A      
Sbjct: 1   MAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEA 60

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M+  G++ + H  + ++  + + G+  E +    +    G+      YNI +   CK G 
Sbjct: 61  MVSHGIETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGN 120

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           +++A     EM    + PD I Y  L+ GYC  G +  A  +F+E+   N+ P +VTYN 
Sbjct: 121 MNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNI 180

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           L  G C+ G +     L + M + G+ P+ +TY I + G C+ GNLS A   FN +  KG
Sbjct: 181 LASGFCKSGLVMEVFDLLDRMADHGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKG 240

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           +      Y++ + G L  G T  AY L   +  +G   D  + + L++ LC++G+++ A+
Sbjct: 241 IDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGAS 300

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
            + + M+    +PD I+Y+ +I    + GD+ +    F++M+++GLS  ++ YT+L++ +
Sbjct: 301 NVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGY 360

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVIT--------------------------------- 630
              GRL+ A   F +M   GI+P+VI                                  
Sbjct: 361 CKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANH 420

Query: 631 ------------------YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
                             Y  LI+G C+   + +A  LF +M ++G+ P+ Y YT LIN 
Sbjct: 421 NKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALING 480

Query: 673 NCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
            C+ G   +A  L +EM+D+ IEPD  T S L
Sbjct: 481 YCSQGEISKAEDLLQEMIDKGIEPDELTFSVL 512



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 140/467 (29%), Positives = 243/467 (52%), Gaps = 20/467 (4%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCK 255
           +  M+ +G+  +    + +++  R  G + +    +    + G+    V YN  +D++CK
Sbjct: 58  YEAMVSHGIETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYCK 117

Query: 256 EGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHS 315
            G M EA++LL EM+  G +P+ + Y  LI G+   GE++ A+ +  +MLK  ++    +
Sbjct: 118 NGNMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVT 177

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           YN +  G+ + GL++E  +L + M   G+ P   TY I I G C+ G +S+A   F  + 
Sbjct: 178 YNILASGFCKSGLVMEVFDLLDRMADHGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVE 237

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL-RSRNLVPTVVTYNTLIDGLCRYGDL 434
            K +    + Y++++ GY  SG    A++LF  + R  NLV    + + LI+ LCR G++
Sbjct: 238 EKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDH-FSCSKLINDLCRVGNV 296

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A  + + M+   ++PDVI+Y+ +++  C+ G++  A  +F++M+++GL  D   YT  
Sbjct: 297 QGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTIL 356

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA------------ 542
           + G  K G   EA +L  +M   G  PD+I Y VL+ G  K  +L++             
Sbjct: 357 MNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLK-ETLQQGWEGIAKERRSFL 415

Query: 543 -----NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
                N+LL  M      PD   YT +I    +   L   R+LF+ ML+KGL+P    YT
Sbjct: 416 LRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYT 475

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRI 644
            LI+ + ++G +  A     EM  KGI P+ +T++ L     R R+I
Sbjct: 476 ALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVLNQSSLRSRKI 522



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 137/416 (32%), Positives = 212/416 (50%), Gaps = 26/416 (6%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK-----ARE 229
           I ++ +  Y K   + + + + N+M   GL PD     +I      NG+ +K     A++
Sbjct: 107 IYNIAMDTYCKNGNMNEAVKLLNEMKCGGLTPD-----KIHYTCLINGYCLKGEMQNAQQ 161

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           V+  M +  I+P IVTYN +   FCK G + E  +LL  M   G  PN +TY + I GF 
Sbjct: 162 VFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADHGLEPNSLTYGIAIVGFC 221

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           R G L +A  L   + + G+      Y+ ++CGY   G    A  L   +  +G      
Sbjct: 222 RGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHF 281

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           + + LI  LC+ G V  A +    ML  NV+PD+ISY+ L+  YC++G++ +A L F ++
Sbjct: 282 SCSKLINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDM 341

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK---- 465
             R L   V+ Y  L++G C+ G L+ A QL   M N GI PDVI YT++++G  K    
Sbjct: 342 VQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQ 401

Query: 466 MGNLSMAREFFNEMLRKG------------LQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
            G   +A+E  + +LR              ++PD   YT  I G+ K     EA  L +E
Sbjct: 402 QGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDE 461

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
           ML KG  PD   Y  L++G C  G + +A +LL++M+  G  PD +T++ +  +SL
Sbjct: 462 MLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVLNQSSL 517



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 142/485 (29%), Positives = 231/485 (47%), Gaps = 16/485 (3%)

Query: 201 RNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQ 260
           R G  PDV   + +I+     G  +KA + Y  M   GI+ +    + +L  F K G   
Sbjct: 28  RQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTS 87

Query: 261 EALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII 320
           E +    + +  G   + V YN+ +  + +NG + +A  L+ +M   GL      Y  +I
Sbjct: 88  EVIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKCGGLTPDKIHYTCLI 147

Query: 321 CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
            GY  KG +  A  + EEM+   + P + TYNIL  G CK G V +       M    + 
Sbjct: 148 NGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADHGLE 207

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           P+ ++Y   + G+CR GN+ EA +LF+ +  + +    V Y++++ G    G  + A  L
Sbjct: 208 PNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYML 267

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
              +  QG L D  + + ++N  C++GN+  A      ML   + PD  +Y+  I+   +
Sbjct: 268 FVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQ 327

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHIT 560
            GD  +A+    +M+ +G   D+I Y +L++G CK G L+EA +L  +M   G  PD I 
Sbjct: 328 NGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIA 387

Query: 561 YTSIIHASLE---------MGDLRRG-------RDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           YT ++   L+         +   RR          L ++M    + P +  YTVLI    
Sbjct: 388 YTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKC 447

Query: 605 ARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
               L  A   F EM  KG+ P+   Y ALING C    I +A  L  +M ++GI P++ 
Sbjct: 448 KAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDEL 507

Query: 665 TYTIL 669
           T+++L
Sbjct: 508 TFSVL 512



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 120/264 (45%)

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
           + Y ++++G CK   L  A +      R+G  PD + Y+  I    K+G+  +A    E 
Sbjct: 1   MAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEA 60

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           M++ G   +    + L+    KLG   E      K    G   D + Y   +    + G+
Sbjct: 61  MVSHGIETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGN 120

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
           +     L N M   GL+P  + YT LI+ +  +G ++ A   F EM    I P+++TYN 
Sbjct: 121 MNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNI 180

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
           L +G C+   + + + L   M + G+ PN  TY I I   C  GN  EA  L+  + ++ 
Sbjct: 181 LASGFCKSGLVMEVFDLLDRMADHGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKG 240

Query: 694 IEPDYCTHSALLLKQLDKDYKVHA 717
           I+     +S+++   L   +  HA
Sbjct: 241 IDHIEVMYSSMVCGYLLSGWTDHA 264



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 18/165 (10%)

Query: 162 LIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDV------------- 208
           ++  GLS  + + +  +L+  Y K   +++   +F +M   G+ PDV             
Sbjct: 341 MVQRGLS--IDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKE 398

Query: 209 ---KNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
              +    I K  R         ++   M +  I+P +  Y  ++D  CK   + EA EL
Sbjct: 399 TLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEAREL 458

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
             EM  +G +P+   Y  LI G+   GE+ +A  L+++M+  G++
Sbjct: 459 FDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIE 503


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 134/426 (31%), Positives = 213/426 (50%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           PSI+ +  +L    K       + L  +MQ  G  P   T N+++     + +  +A   
Sbjct: 81  PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCF 140

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  M+KLG +    ++  ++ GY     + +A+ L ++++  G  P + TY  LI  LCK
Sbjct: 141 LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK 200

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
              ++ A   F +M      P++++YN L+ G C  G  G+A  L  ++  R + P V+T
Sbjct: 201 NRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVIT 260

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           +  LID   + G L  A++L   MI   + PDV TY  ++NG C  G L  AR+ F  M 
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLME 320

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           R G  P+   YTT I G  K     +  ++  EM  KG   + ITY VL+ G C +G  +
Sbjct: 321 RNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPD 380

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
            A E+  +M      PD  TY  ++      G + +   +F  M ++ +   +VTYT++I
Sbjct: 381 VAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIII 440

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                 G++E AF  F  +  KG++PNVITY  +I+G CR   I +A  LF  M+E+G L
Sbjct: 441 QGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFL 500

Query: 661 PNKYTY 666
           PN+  Y
Sbjct: 501 PNESVY 506



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 116/374 (31%), Positives = 201/374 (53%)

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
            ++L E+M   G+ P L T NI+++ +C   +   A     +M++    PD++++ +LL 
Sbjct: 102 VISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLN 161

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
           GYC    I +A  LFD++      P VVTY TLI  LC+   L  A +L   M   G  P
Sbjct: 162 GYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRP 221

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           +V+TY  +V G C++G    A     +M+++ ++P+   +T  I   +K+G   EA  L 
Sbjct: 222 NVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELY 281

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
             M+     PD+ TY  L++GLC  G L+EA ++   M  +G  P+ + YT++IH   + 
Sbjct: 282 NVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKS 341

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
             +  G  +F  M +KG+    +TYTVLI  +   GR ++A   F++M  +   P++ TY
Sbjct: 342 KRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTY 401

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           N L++GLC   ++++A  +F  M +  +  N  TYTI+I   C  G  ++A  L+  +  
Sbjct: 402 NVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFS 461

Query: 692 REIEPDYCTHSALL 705
           + ++P+  T++ ++
Sbjct: 462 KGMKPNVITYTTMI 475



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 115/344 (33%), Positives = 182/344 (52%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y   + +E  + +F+++L  G  P+V     +I+ L  N     A E++  MG  G +P+
Sbjct: 163 YCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPN 222

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +VTYN ++   C+ G   +A  LL +M  R   PN +T+  LI  F + G+L +A+ L  
Sbjct: 223 VVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYN 282

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M+++ +     +Y  +I G    GLL EA  +   M   G  P    Y  LI+G CK  
Sbjct: 283 VMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSK 342

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           RV D    F+EM +K V+ + I+Y  L+ GYC  G    A  +F+++ SR   P + TYN
Sbjct: 343 RVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYN 402

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            L+DGLC  G +E A  + E M  + +  +++TYTI++ G CK+G +  A + F  +  K
Sbjct: 403 VLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSK 462

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G++P+   YTT I+G  + G   EA  L ++M   GF P+   Y
Sbjct: 463 GMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/375 (29%), Positives = 182/375 (48%)

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
           +AL+L   MV     P++  +  L+  + K  R       F +M    + P + + N ++
Sbjct: 66  DALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVM 125

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
           +  C S     A     ++      P +VT+ +L++G C +  +E A  L + ++  G  
Sbjct: 126 HCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFK 185

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
           P+V+TYT ++   CK  +L+ A E FN+M   G +P+   Y   + G  ++G   +A  L
Sbjct: 186 PNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWL 245

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
             +M+ +   P++IT+  L+    K+G L EA EL   M+     PD  TY S+I+    
Sbjct: 246 LRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCM 305

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
            G L   R +F  M R G  P  V YT LIH      R+E     F EM  KG+  N IT
Sbjct: 306 YGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTIT 365

Query: 631 YNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML 690
           Y  LI G C + R D A  +F  M      P+  TY +L++  C  G  ++AL +++ M 
Sbjct: 366 YTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMR 425

Query: 691 DREIEPDYCTHSALL 705
            RE++ +  T++ ++
Sbjct: 426 KREMDINIVTYTIII 440



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 88/321 (27%), Positives = 160/321 (49%)

Query: 385 SYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENM 444
           SY  +L     +    +A  LF  +     +P+++ +  L+  + +    +V   L E M
Sbjct: 50  SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109

Query: 445 INQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDT 504
              GI P + T  I+++  C       A  F  +M++ G +PD   +T+ + G       
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169

Query: 505 SEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
            +A  L +++L  GF P+++TY  L+  LCK   L  A EL  +M  +G  P+ +TY ++
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229

Query: 565 IHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
           +    E+G       L  +M+++ + P ++T+T LI A    G+L  A   ++ M    +
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289

Query: 625 RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALR 684
            P+V TY +LINGLC    +D+A  +F  ME  G  PN+  YT LI+  C +   ++ ++
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMK 349

Query: 685 LYKEMLDREIEPDYCTHSALL 705
           ++ EM  + +  +  T++ L+
Sbjct: 350 IFYEMSQKGVVANTITYTVLI 370



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 77/165 (46%)

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
           +Y  I+   L         DLF  M+     P+++ +T L+   A   R ++    F +M
Sbjct: 50  SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
           Q+ GI P + T N +++ +C   +  +A      M + G  P+  T+T L+N  C+    
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169

Query: 680 QEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           ++A+ L+ ++L    +P+  T++ L+       +  HAVE    +
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQM 214


>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
          Length = 590

 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 143/529 (27%), Positives = 256/529 (48%), Gaps = 6/529 (1%)

Query: 106 IALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVC---VNMHGILDVL 162
           ++  FF+WVE+            T++  L +    ++A  ++E +     ++   +L+ +
Sbjct: 57  VSWAFFKWVESNLNHXHSLQSSWTMIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAV 116

Query: 163 IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG 222
           +        + +IL  L++ Y    M +  + VF  M  +G  P +  C  ++  L    
Sbjct: 117 VRIHDDPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKAR 176

Query: 223 FSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYN 282
            +    +VY+ M   G+ P+I  +N ++ + CK G++++A +LL EM+ R   P+  TYN
Sbjct: 177 LTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYN 236

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
            LI+ + + G   +A G+   M + G+     +YN +I G+  +G + EAL L  E+   
Sbjct: 237 TLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREI--N 294

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           G  P   TY  LI G C+   + +A      M  + + P +++YN++L   C  G I +A
Sbjct: 295 GATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDA 354

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
             L +E+  R + P  VT NTLI+  C+ GD+  A ++K+ M+  G+ PD  T+  +++G
Sbjct: 355 NRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHG 414

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            CK+  +  A+EF  EML  G  P    Y+  +       +     RL +E+  KG   D
Sbjct: 415 FCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVD 474

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
           +  Y  L+  LCK+  +E A  +   M G G   D + YTS+ +A  + G      D+ +
Sbjct: 475 ISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLD 534

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
            M ++ L  TL  Y     ++A  G + L   +   ++ + I  N++ Y
Sbjct: 535 EMDKRRLMITLKIYRCFSASYAGDGSI-LGLFWDHVIERRLISKNILKY 582



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/401 (31%), Positives = 206/401 (51%), Gaps = 2/401 (0%)

Query: 260 QEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI 319
           Q+A+++   M+  G  P+     VL+   ++         + + M+++G+  + H +N +
Sbjct: 144 QDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVL 203

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           I    + G + +A  L  EM +R + P L TYN LI   CK G   +A      M R  V
Sbjct: 204 IHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGV 263

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
            PDI++YN+L+YG+CR G + EA  LF E+      P  VTY TLIDG CR  DLE A +
Sbjct: 264 SPDIVTYNSLIYGFCREGRMREALRLFREINGA--TPNHVTYTTLIDGYCRVNDLEEALR 321

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           L+E M  +G+ P V+TY  ++   C+ G +  A    NEM  + ++PD     T I    
Sbjct: 322 LREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYC 381

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           K+GD   A +++++ML  G  PD  T+  L+HG CKL  ++ A E L +M+  GF P + 
Sbjct: 382 KIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYS 441

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
           TY+ ++ +  +  +      L + + RKGL   +  Y  LI       ++E A   F+ M
Sbjct: 442 TYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLM 501

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
           Q KG++ + + Y +L     +  +   A  +  +M++  ++
Sbjct: 502 QGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLM 542



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 118/408 (28%), Positives = 199/408 (48%), Gaps = 3/408 (0%)

Query: 288 FSRNGELEQ-ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           F  N  + Q A  +   M   G K   H+   ++   ++  L      + ++MV  GV P
Sbjct: 136 FYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVP 195

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
            +  +N+LI+  CK G V  A     EM  + + PD+ +YNTL+  YC+ G   EA  + 
Sbjct: 196 NIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQ 255

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
           D +    + P +VTYN+LI G CR G +  A +L   +   G  P+ +TYT +++G C++
Sbjct: 256 DRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHVTYTTLIDGYCRV 313

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
            +L  A      M  +GL P    Y + +    + G   +A RL  EM  +   PD +T 
Sbjct: 314 NDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTC 373

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           N L++  CK+G +  A ++ +KM+  G  PD  T+ ++IH   ++ ++   ++    ML 
Sbjct: 374 NTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLD 433

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
            G SP+  TY+ L+ ++  +   E       E+  KG+  ++  Y ALI  LC++ +I+ 
Sbjct: 434 AGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIES 493

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREI 694
           A  +F  M+ +G+  +   YT L      AG    A  +  EM  R +
Sbjct: 494 AERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRL 541



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 175/362 (48%), Gaps = 3/362 (0%)

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
           DA   F  M      P + +   LL    ++      + ++ ++    +VP +  +N LI
Sbjct: 145 DAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLI 204

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
              C+ GD+E A+QL   M ++ I PD+ TY  +++  CK G    A    + M R G+ 
Sbjct: 205 HACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVS 264

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           PD   Y + I G  + G   EA RL  E+   G  P+ +TY  L+ G C++  LEEA  L
Sbjct: 265 PDIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHVTYTTLIDGYCRVNDLEEALRL 322

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
              M  +G  P  +TY SI+    E G ++    L N M  + + P  VT   LI+A+  
Sbjct: 323 REVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCK 382

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
            G +  A     +M   G++P+  T+ ALI+G C+L  +D A     +M + G  P+  T
Sbjct: 383 IGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYST 442

Query: 666 YTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLT 725
           Y+ L++   +  N +  +RL  E+  + +  D   + A L+++L K  K+ + E + +L 
Sbjct: 443 YSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRA-LIRRLCKIDKIESAERIFTLM 501

Query: 726 LG 727
            G
Sbjct: 502 QG 503


>gi|224083888|ref|XP_002307160.1| predicted protein [Populus trichocarpa]
 gi|222856609|gb|EEE94156.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 174/593 (29%), Positives = 278/593 (46%), Gaps = 41/593 (6%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           AL  F  +  +  V  DE+VF  ++    + G +  A  ++ET+   N+           
Sbjct: 120 ALDVFNEIHDRGWV--DEYVFSILVLAFSKWGKVDKACELIETMEEKNVR---------- 167

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
               ++ K    L+  + K+S V++ L +F+KM ++G  PD+   + II  L  N    K
Sbjct: 168 ----LNKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDVKK 223

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVT--YNVL 284
           A  +Y  M  F I+P +     ++ SF KE    E L   +E       P   T  YN +
Sbjct: 224 ALCLYSEMKGFKIQPDVKIVTKLISSFSKE----EELTCFFEEMHEDMDPKASTLLYNSV 279

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           +     NG + +A  L++  + +G        N I  G  E G L     +        V
Sbjct: 280 LNSLVDNGSVHKAYHLLQ-AITIG--------NCI--GDGEIGKLFRGKAM--------V 320

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
            P   T++I+I GL K G +  A   F +M R    PD++ YN L+ G C S  + E+  
Sbjct: 321 PPNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCG 380

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
           L  E+    + PT  T N +   LCR  D+  A  L + M   G +P +   T +V   C
Sbjct: 381 LLQEMEESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKELC 440

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
           K G    A +F  +M  +G QPD  AY+  + G +K+ +  +A +L +++ A+G+ PD+I
Sbjct: 441 KHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVI 500

Query: 525 TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM 584
            YN+L+ GLCK   + EA  LL +M   G +P  +TY ++I    +   L       + M
Sbjct: 501 AYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMM 560

Query: 585 LRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRI 644
           + K   P ++TY+ LI+     GR + A + ++EM  KG  P+ I Y A I+GL    R 
Sbjct: 561 IEKEREPNVITYSTLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCGRP 620

Query: 645 DQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           ++A     +MEE  + P+ Y Y  L+N      N   A  + +EM+D+   PD
Sbjct: 621 NEALVYLREMEEREMKPDTYVYVGLLNAFLVDSNQPLAFEILQEMVDKGKFPD 673



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 146/565 (25%), Positives = 252/565 (44%), Gaps = 85/565 (15%)

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           T   +L  +C   E  +AL++  E+  RG     V +++L+  FS+ G++++A  LI  M
Sbjct: 103 TLTPVLQVYCNMAEFDKALDVFNEIHDRGWVDEYV-FSILVLAFSKWGKVDKACELIETM 161

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
            +  ++++  ++  +I G+ ++  + +AL+L ++M   G  P ++ Y+++I GLC    V
Sbjct: 162 EEKNVRLNKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDV 221

Query: 365 SDARHRFFEMLRKNVIPDI---------------------------------ISYNTLLY 391
             A   + EM    + PD+                                 + YN++L 
Sbjct: 222 KKALCLYSEMKGFKIQPDVKIVTKLISSFSKEEELTCFFEEMHEDMDPKASTLLYNSVLN 281

Query: 392 GYCRSGNIGEAFLLFDELRSRNLV----------------PTVVTYNTLIDGLCRYGDLE 435
               +G++ +A+ L   +   N +                P   T++ +I+GL + GDL+
Sbjct: 282 SLVDNGSVHKAYHLLQAITIGNCIGDGEIGKLFRGKAMVPPNSTTFSIVINGLIKTGDLD 341

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA----- 490
           +A  L  +M   G  PD++ Y  +++G C    L  +     EM   G++P  F      
Sbjct: 342 LAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQEMEESGIEPTSFTNNCIF 401

Query: 491 -----------------------------YTTQIAGEL-KLGDTSEAYRLQEEMLAKGFP 520
                                        ++T +  EL K G   EA +   +M  +GF 
Sbjct: 402 GCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKELCKHGKEVEACKFLVDMAEEGFQ 461

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           PD++ Y+  + GL K+  +++A +L + +   G+ PD I Y  +I    +   +   ++L
Sbjct: 462 PDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQRIAEAQNL 521

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
            + M  KGL P+ VTY  LI        LE A ++ S M  K   PNVITY+ LINGLC 
Sbjct: 522 LHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMMIEKEREPNVITYSTLINGLCN 581

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
             R D A  L+ +M  +G  P+   Y   I+   N G   EAL   +EM +RE++PD   
Sbjct: 582 AGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCGRPNEALVYLREMEEREMKPDTYV 641

Query: 701 HSALLLKQLDKDYKVHAVEYLESLT 725
           +  LL   L    +  A E L+ + 
Sbjct: 642 YVGLLNAFLVDSNQPLAFEILQEMV 666



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 138/485 (28%), Positives = 211/485 (43%), Gaps = 35/485 (7%)

Query: 110 FFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSS 169
           FF  +      K    ++ ++L  L+++G +  AY +++ +   N  G  D  IG     
Sbjct: 259 FFEEMHEDMDPKASTLLYNSVLNSLVDNGSVHKAYHLLQAITIGNCIG--DGEIGK---- 312

Query: 170 CVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKARE 229
                       ++  K+MV                P+    + +I  L   G    A  
Sbjct: 313 ------------LFRGKAMVP---------------PNSTTFSIVINGLIKTGDLDLAVG 345

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
           ++R M   G KP ++ YN ++D  C    +QE+  LL EM+  G  P   T N +     
Sbjct: 346 LFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQEMEESGIEPTSFTNNCIFGCLC 405

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           R  ++  A  L++ M   G          ++    + G  VEA     +M   G  P + 
Sbjct: 406 RRHDISGALHLLKKMRIHGHVPWIKHSTSLVKELCKHGKEVEACKFLVDMAEEGFQPDIV 465

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
            Y+  + GL K   V  A   F ++  +   PD+I+YN L+ G C++  I EA  L  E+
Sbjct: 466 AYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQRIAEAQNLLHEM 525

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
             + LVP+ VTYNTLIDGLC+   LE A      MI +   P+VITY+ ++NG C  G  
Sbjct: 526 EEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMMIEKEREPNVITYSTLINGLCNAGRP 585

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A   +NEM RKG  P   AY   I G    G  +EA     EM  +   PD   Y  L
Sbjct: 586 DDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCGRPNEALVYLREMEEREMKPDTYVYVGL 645

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPD--HITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
           ++      +   A E+L++MV  G  PD     + S+ +A L+  +  R      N+L K
Sbjct: 646 LNAFLVDSNQPLAFEILQEMVDKGKFPDLHDKNHISVRNAILKFSEDARTSSSIKNLLAK 705

Query: 588 GLSPT 592
           G  P+
Sbjct: 706 GSIPS 710



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 91/362 (25%), Positives = 145/362 (40%), Gaps = 54/362 (14%)

Query: 397 GNIG---EAFLLFDELRSRNL-VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
           GN G   EA LLFD+++   L VP   +Y  L++ L +   +++ +   + M + G   D
Sbjct: 41  GNAGLVVEANLLFDQVQKMGLCVPNSYSYTCLLEVLSKSICIDLLEMRLKEMHDHGWGFD 100

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
             T T ++   C M     A + FNE+  +G   D + ++  +    K G   +A  L E
Sbjct: 101 KYTLTPVLQVYCNMAEFDKALDVFNEIHDRGWV-DEYVFSILVLAFSKWGKVDKACELIE 159

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
            M  K    +  T+  L++G  K   +++A  L  KM   GF PD   Y  II       
Sbjct: 160 TMEEKNVRLNKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNK 219

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSE-MQVKG-------- 623
           D+++   L++ M    + P +   T LI + +    L   F    E M  K         
Sbjct: 220 DVKKALCLYSEMKGFKIQPDVKIVTKLISSFSKEEELTCFFEEMHEDMDPKASTLLYNSV 279

Query: 624 ----------------------------------------IRPNVITYNALINGLCRLRR 643
                                                   + PN  T++ +INGL +   
Sbjct: 280 LNSLVDNGSVHKAYHLLQAITIGNCIGDGEIGKLFRGKAMVPPNSTTFSIVINGLIKTGD 339

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSA 703
           +D A GLF DM   G  P+   Y  LI+  C +   QE+  L +EM +  IEP   T++ 
Sbjct: 340 LDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQEMEESGIEPTSFTNNC 399

Query: 704 LL 705
           + 
Sbjct: 400 IF 401


>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 819

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 143/527 (27%), Positives = 250/527 (47%)

Query: 198 KMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG 257
           KM  +G+ PD    N +I   +      +A +V+  M   G     VTYN +LD + K  
Sbjct: 269 KMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSH 328

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
             +EA+++L EM+  G SP+ VTYN LI+ ++R+G L++A  L   M + G K    +Y 
Sbjct: 329 RPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYT 388

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            ++ G+   G +  A+N+ EEM   G  P + T+N  I      G+  D    F E+   
Sbjct: 389 TLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVC 448

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
            + PDI+++NTLL  + ++G   E   +F E++    VP   T+NTLI    R G  E A
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
             +   M++ G+ PD+ TY  ++    + G    + +   EM     +P+   Y + +  
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
                +    + L EE+ +    P  +    LV    K   L EA     ++   GF PD
Sbjct: 569 YANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPD 628

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
             T  S++        + +  ++ + M  +G +P++ TY  L++ H+       +     
Sbjct: 629 ITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILR 688

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
           E+  KGI+P++I+YN +I   CR  R+  A  +F +M + GI+P+  TY   I       
Sbjct: 689 EILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDVITYNTFIGSYAADS 748

Query: 678 NWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
            ++EA+ + + M+     P+  T+++++      + K  A  ++E L
Sbjct: 749 MFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 144/523 (27%), Positives = 259/523 (49%), Gaps = 8/523 (1%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           + L+    + S+ ++   VF +M   G   D    N ++ V    G S + +E  +++ E
Sbjct: 283 NTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVY---GKSHRPKEAMKVLNE 339

Query: 237 F---GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
               G  PSIVTYN+++ ++ ++G + EA+EL  +M  +G  P+  TY  L++GF R G+
Sbjct: 340 MELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGK 399

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           +E A  +  +M   G K +  ++N  I  Y  +G  V+ + + +E+   G++P + T+N 
Sbjct: 400 VESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNT 459

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           L+    + G  S+    F EM R   +P+  ++NTL+  Y R G+  +A  ++  +    
Sbjct: 460 LLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAG 519

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
           + P + TYNT++  L R G  E ++++   M +    P+ +TY  +++       + +  
Sbjct: 520 VTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMH 579

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
               E+    ++P      T +    K     EA R   E+  +GF PD+ T N +V   
Sbjct: 580 SLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIY 639

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
            +   + +ANE+L  M   GF P   TY S+++      D  +  ++   +L KG+ P +
Sbjct: 640 GRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDI 699

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
           ++Y  +I+A+    R+  A   FSEM+  GI P+VITYN  I         ++A G+   
Sbjct: 700 ISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRY 759

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
           M + G  PN+ TY  +++  C      EA +L+ E L R ++P
Sbjct: 760 MIKHGCRPNQNTYNSIVDGYCKLNRKDEA-KLFVEDL-RNLDP 800



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 137/532 (25%), Positives = 260/532 (48%), Gaps = 1/532 (0%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           ++ +++ +  K+  V     +FN +  +G   DV +   +I    ++G   +A  V++ M
Sbjct: 175 VIAIVISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKM 234

Query: 235 GEFGIKPSIVTYNTMLDSFCKEG-EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
            E G KP+++TYN +L+ F K G    +   L+ +M+  G +P+  TYN LIT   R   
Sbjct: 235 EEEGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSL 294

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
            ++A  +  +M   G      +YN ++  Y +     EA+ +  EM   G +P++ TYN 
Sbjct: 295 HQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNS 354

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           LI    + G + +A     +M  K   PD+ +Y TLL G+ R+G +  A  +F+E+R+  
Sbjct: 355 LISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAG 414

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
             P + T+N  I      G      ++ + +   G+ PD++T+  ++    + G  S   
Sbjct: 415 CKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS 474

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
             F EM R G  P+R  + T I+   + G   +A  +   ML  G  PDL TYN ++  L
Sbjct: 475 GVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAAL 534

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
            + G  E++ ++L +M      P+ +TY S++HA     ++     L   +    + P  
Sbjct: 535 ARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRA 594

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
           V    L+   +    L  A   FSE++ +G  P++ T N++++   R + + +A  +   
Sbjct: 595 VLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDY 654

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           M+E G  P+  TY  L+  +  + ++ ++  + +E+L + I+PD  +++ ++
Sbjct: 655 MKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVI 706



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 132/471 (28%), Positives = 223/471 (47%), Gaps = 12/471 (2%)

Query: 246 YNTMLDS---------FCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
           Y +MLD+           KEG +  A  L   +Q  G S +  +Y  LI+ F+ +G   +
Sbjct: 167 YQSMLDNSVIAIVISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYRE 226

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL-NLEEEMVTRGVAPTLATYNILI 355
           A  + + M + G K +  +YN I+  + + G     + +L E+M + G+AP   TYN LI
Sbjct: 227 AVNVFKKMEEEGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI 286

Query: 356 YGLCKWGRV-SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
              CK G +  +A   F EM       D ++YN LL  Y +S    EA  + +E+     
Sbjct: 287 -TCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGF 345

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P++VTYN+LI    R G L+ A +LK  M  +G  PDV TYT +++G  + G +  A  
Sbjct: 346 SPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMN 405

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
            F EM   G +P+   +   I      G   +  ++ +E+   G  PD++T+N L+    
Sbjct: 406 IFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFG 465

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           + G   E + + ++M   GF+P+  T+ ++I A    G   +   ++  ML  G++P L 
Sbjct: 466 QNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLS 525

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           TY  ++ A A  G  E +    +EM+    +PN +TY +L++     + I   + L  ++
Sbjct: 526 TYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEV 585

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
               I P       L+          EA R + E+ +R   PD  T ++++
Sbjct: 586 YSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMV 636



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 113/429 (26%), Positives = 188/429 (43%), Gaps = 62/429 (14%)

Query: 116 TQPGVKRDEFVFCTILEILIESGLLRSAYWVVETV--------VC--------------- 152
            + G K D F + T+L     +G + SA  + E +        +C               
Sbjct: 376 AEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKF 435

Query: 153 VNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCN 212
           V+M  I D +   GLS    I   + LL ++ +  M  +   VF +M R G +P+ +  N
Sbjct: 436 VDMMKIFDEINVCGLSP--DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFN 493

Query: 213 RIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR 272
            +I      G   +A  VYR M + G+ P + TYNT+L +  + G  +++ ++L EM+  
Sbjct: 494 TLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDG 553

Query: 273 GCSPNGVTYNVLITGFSRNGE-----------------------------------LEQA 297
            C PN +TY  L+  ++   E                                   L +A
Sbjct: 554 RCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEA 613

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
                ++ + G      + N ++  Y  + ++ +A  + + M  RG  P++ATYN L+Y 
Sbjct: 614 ERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYM 673

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
             +      +     E+L K + PDIISYNT++Y YCR+  + +A  +F E+R   +VP 
Sbjct: 674 HSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPD 733

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           V+TYNT I         E A  +   MI  G  P+  TY  +V+G CK+     A+ F  
Sbjct: 734 VITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVE 793

Query: 478 EMLRKGLQP 486
           ++  + L P
Sbjct: 794 DL--RNLDP 800


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/456 (30%), Positives = 227/456 (49%), Gaps = 1/456 (0%)

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M + G  P ++    ++  F     + +A  ++ E+  R   P+   YN LI+GF +  +
Sbjct: 95  MVDKGYTPDVILCTKLIKGFFNSRNIGKATRVM-EILERYGKPDVFAYNALISGFIKANQ 153

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
           LE A  ++  M   G      +YN +I  +  +G L  AL + EE++     PT+ TY I
Sbjct: 154 LENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTI 213

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           LI      G +  A     EML K + PD ++YN ++ G C+   + +AF L   L SR 
Sbjct: 214 LIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRG 273

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAR 473
             P ++TYN L+  L   G     ++L   MI+ G  P+V+T++I++   C+ G +  A 
Sbjct: 274 CKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAV 333

Query: 474 EFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
                M  KGL+PD + Y   IAG  + G    A    E M++ G  PD++ YN ++ GL
Sbjct: 334 NLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGL 393

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
           C+ G  ++A E+  K+   G  P+  +Y ++  A    GD  R  ++   +L +G+ P  
Sbjct: 394 CRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDE 453

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
           +TY  LI      G ++ A     +MQ    RPNV++YN ++ GLC++ R + A  +   
Sbjct: 454 ITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAA 513

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           M E+G  PN+ TY +LI     +G   EA+ L   +
Sbjct: 514 MTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSL 549



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 134/457 (29%), Positives = 228/457 (49%), Gaps = 1/457 (0%)

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +L+  C+ G+  E+L  L  M  +G +P+ +    LI GF  +  + +A  ++  + + G
Sbjct: 75  LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG 134

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            K    +YN +I G+ +   L  A  + + M +RG  P + TYNI+I   C  G++  A 
Sbjct: 135 -KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLAL 193

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F E+L+ N  P +I+Y  L+      G I  A  L DE+ S+ L P  +TYN +I G+
Sbjct: 194 EIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGM 253

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+   ++ A +L  ++ ++G  PD+ITY I++      G  S   +  +EM+  G +P+ 
Sbjct: 254 CKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNV 313

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             ++  I    + G   EA  L   M  KG  PD   Y+ L+ G C+ G L+ A E L  
Sbjct: 314 VTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEY 373

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M+ DG +PD + Y +I+      G   +  ++F  +   G  P + +Y  L  A  + G 
Sbjct: 374 MISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGD 433

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
              A     ++  +GI P+ ITYN+LI+ LCR   +D+A  L +DM+     PN  +Y I
Sbjct: 434 RYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNI 493

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           ++   C      +A+ +   M ++  +P+  T+  L+
Sbjct: 494 ILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLI 530



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 143/444 (32%), Positives = 220/444 (49%), Gaps = 9/444 (2%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           M+  G  PDV  C ++IK   ++    KA  V  ++  +G KP +  YN ++  F K  +
Sbjct: 95  MVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG-KPDVFAYNALISGFIKANQ 153

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           ++ A  +L  M+ RG  P+ VTYN++I  F   G+L+ A  +  ++LK   + +  +Y  
Sbjct: 154 LENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTI 213

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR-- 376
           +I      G +  A+ L +EM+++G+ P   TYN +I G+CK   V  A    FE+LR  
Sbjct: 214 LIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKA----FELLRSL 269

Query: 377 --KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
             +   PDII+YN LL      G   E   L  E+ S    P VVT++ LI  LCR G +
Sbjct: 270 SSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKV 329

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           E A  L  +M  +G+ PD   Y  ++ G C+ G L +A EF   M+  G  PD   Y T 
Sbjct: 330 EEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTI 389

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           +AG  + G   +A  + E++   G PP++ +YN L   L   G    A E++ K++  G 
Sbjct: 390 MAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGI 449

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            PD ITY S+I      G +    +L  +M      P +V+Y +++       R   A  
Sbjct: 450 DPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIE 509

Query: 615 YFSEMQVKGIRPNVITYNALINGL 638
             + M  KG +PN  TY  LI G+
Sbjct: 510 VLAAMTEKGCQPNETTYILLIEGI 533



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 198/385 (51%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K + +E    V ++M   G LPDV   N +I      G    A E++  + +   +P+
Sbjct: 148 FIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPT 207

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           ++TY  ++++   +G +  A++LL EM  +G  P+ +TYN +I G  +   +++A  L+R
Sbjct: 208 VITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLR 267

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            +   G K    +YN ++     +G   E   L  EM++ G  P + T++ILI  LC+ G
Sbjct: 268 SLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDG 327

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           +V +A +    M  K + PD   Y+ L+ G+CR G +  A    + + S   +P +V YN
Sbjct: 328 KVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYN 387

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           T++ GLCR G  + A ++ E +   G  P+V +Y  + +     G+   A E   ++L +
Sbjct: 388 TIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQ 447

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G+ PD   Y + I+   + G   EA  L  +M +  + P++++YN+++ GLCK+    +A
Sbjct: 448 GIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDA 507

Query: 543 NELLRKMVGDGFIPDHITYTSIIHA 567
            E+L  M   G  P+  TY  +I  
Sbjct: 508 IEVLAAMTEKGCQPNETTYILLIEG 532



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 190/370 (51%), Gaps = 2/370 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV-LRDNGFSVKAREVYRMMGEFGIKP 241
           +  +  ++  L +F ++L++   P V     +I+  + D G  V  + +  M+ + G++P
Sbjct: 183 FCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSK-GLEP 241

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
             +TYN ++   CKE  + +A ELL  +  RGC P+ +TYN+L+      G+  +   LI
Sbjct: 242 DTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLI 301

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
            +M+ +G K +  +++ +I      G + EA+NL   M  +G+ P    Y+ LI G C+ 
Sbjct: 302 SEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCRE 361

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           GR+  A      M+    +PDI++YNT++ G CR+G   +A  +F++L      P V +Y
Sbjct: 362 GRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSY 421

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           NTL   L   GD   A ++   ++NQGI PD ITY  +++  C+ G +  A E   +M  
Sbjct: 422 NTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQS 481

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
              +P+  +Y   + G  K+   ++A  +   M  KG  P+  TY +L+ G+   G   E
Sbjct: 482 GRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAE 541

Query: 542 ANELLRKMVG 551
           A EL   + G
Sbjct: 542 AMELANSLHG 551



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 110/238 (46%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +L+    +   VE+ + +   M   GL PD    + +I      G    A E    M   
Sbjct: 318 ILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISD 377

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G  P IV YNT++   C+ G+  +ALE+  ++   GC PN  +YN L +    +G+  +A
Sbjct: 378 GCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRA 437

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             +I  +L  G+     +YN +I      G++ EA+ L  +M +    P + +YNI++ G
Sbjct: 438 LEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLG 497

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
           LCK  R +DA      M  K   P+  +Y  L+ G   SG   EA  L + L   N +
Sbjct: 498 LCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSLHGMNAI 555


>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
 gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
          Length = 786

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 178/710 (25%), Positives = 305/710 (42%), Gaps = 63/710 (8%)

Query: 30  FCFSVHTYPSISE--SNNKDSVLNPESESYYKELIISTVEEKPWAFCNNRWVSDHFQAVV 87
              S H  P++    ++ +D +L  +  S  K L +S   E  WA    RW      A  
Sbjct: 80  LAISSHPLPTLPAFLASRRDELLPADIPSLLKALELSGHWE--WALALLRWAGAEGAADA 137

Query: 88  SDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVV 147
           S  E++VR L R  +   +       +   PG + D   + T+L  L  +G    A   V
Sbjct: 138 SALEMVVRALGREGQHDAVCA-LLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERA---V 193

Query: 148 ETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMV-EQCLLVFNKMLRNGLLP 206
           E    +   G+   L+             +++L +Y +      + + + ++M   G+ P
Sbjct: 194 ELFAELRRQGVAPTLV-----------TYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEP 242

Query: 207 DVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELL 266
           D    + +I     +G   +A   +  +   G  P +VTYN +L  F K G   EAL +L
Sbjct: 243 DDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYTEALRVL 302

Query: 267 WEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEK 326
            EM+  GC P+ VTYN L   ++R G  E+A   +  M   GL  +A +YN ++  Y   
Sbjct: 303 KEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNI 362

Query: 327 GLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS- 385
           G + EAL L ++M   G  P + TYN ++  L K  R +       EM R    P+ ++ 
Sbjct: 363 GKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTW 422

Query: 386 ----------------------------------YNTLLYGYCRSGNIGEAFLLFDELRS 411
                                             YNTL+  Y R G+   AF +++E+ S
Sbjct: 423 NTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTS 482

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
               P + TYN L++ L R GD   AQ +   M  +G  P+  +Y++++    K GN++ 
Sbjct: 483 AGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIAG 542

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELK---LGDTSEAYRLQEEMLAKGFPPDLITYNV 528
                 E+    + P      T +    K   LG   +A+   +E+ A+G+ PDL+ +N 
Sbjct: 543 IDAIEKEVYGGTVFPSWVILRTLVIANFKCRRLGGIEKAF---QEVKARGYNPDLVIFNS 599

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           ++    K G   +  E+   +   G  PD ITY S++    +  +      + N +    
Sbjct: 600 MLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQ 659

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
           + P +V+Y  +I+    +G ++ A    SEM   G+ P V+TY+ L+ G   L    +A 
Sbjct: 660 VKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFSEAR 719

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
            +   M +  + P + TY  +++  C A  ++EA     E+   E +P++
Sbjct: 720 EVINYMIQHNLKPMELTYRRVVDSYCKAKRFEEARSFLSEV--SETDPNF 767



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 148/622 (23%), Positives = 265/622 (42%), Gaps = 49/622 (7%)

Query: 121 KRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLL 180
           +RDE +   I  +L    L  S +W             L +L   G         L++++
Sbjct: 97  RRDELLPADIPSLL--KALELSGHW----------EWALALLRWAGAEGAADASALEMVV 144

Query: 181 LIYTKKSMVEQCLLVFNKM-LRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGI 239
               ++   +    + ++M L  G   DV+    ++  L   G   +A E++  +   G+
Sbjct: 145 RALGREGQHDAVCALLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERAVELFAELRRQGV 204

Query: 240 KPSIVTYNTMLDSFCKEG-EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
            P++VTYN +LD + + G      + LL EM+  G  P+  T + +I    R+G +++A 
Sbjct: 205 APTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDDFTASTVIAACCRDGLVDEAV 264

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
               D+   G      +YN ++  + + G   EAL + +EM   G  P   TYN L    
Sbjct: 265 AFFEDLKARGHTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTY 324

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
            + G   +A      M  K ++P+  +YNT++  Y   G + EA  LFD+++    VP V
Sbjct: 325 ARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQMKKSGCVPNV 384

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
            TYN ++  L +     V  ++   M   G  P+ +T+  M+    K G           
Sbjct: 385 NTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEG 444

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M   G++  R  Y T IA   + G  + A+++  EM + GF P L TYN L++ L + G 
Sbjct: 445 MKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGD 504

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL------------------------ 574
              A  ++ KM   GF P+  +Y+ ++    + G++                        
Sbjct: 505 WSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWVILRT 564

Query: 575 ---------RRG--RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
                    R G     F  +  +G +P LV +  ++  +A  G        F  ++  G
Sbjct: 565 LVIANFKCRRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSG 624

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
           + P++ITYN+L++   +     +A  +   ++   + P+  +Y  +IN  C  G  +EA 
Sbjct: 625 LSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQ 684

Query: 684 RLYKEMLDREIEPDYCTHSALL 705
           R+  EM+   + P   T+  L+
Sbjct: 685 RILSEMIADGMAPCVVTYHTLV 706



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 2/206 (0%)

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKM-VGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           D     ++V  L + G  +    LL +M +  G   D   YT+++HA    G   R  +L
Sbjct: 136 DASALEMVVRALGREGQHDAVCALLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERAVEL 195

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGR-LELAFMYFSEMQVKGIRPNVITYNALINGLC 639
           F  + R+G++PTLVTY V++  +   GR          EM+  G+ P+  T + +I   C
Sbjct: 196 FAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDDFTASTVIAACC 255

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
           R   +D+A   F D++  G  P   TY  L+     AGN+ EALR+ KEM     +PD  
Sbjct: 256 RDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQDGCQPDAV 315

Query: 700 THSALLLKQLDKDYKVHAVEYLESLT 725
           T++ L        +   A + L+++T
Sbjct: 316 TYNELAGTYARAGFYEEAAKCLDTMT 341


>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 141/509 (27%), Positives = 244/509 (47%), Gaps = 17/509 (3%)

Query: 212 NRIIKVL-RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQ 270
           N +I +L +D+GF    + +   +    I+    T++ ++ ++ K G  ++A+E   +M+
Sbjct: 100 NLVIDMLAKDDGFDTYWK-ILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMK 158

Query: 271 GRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLV 330
             GC P+  TYN ++    +      A  +   MLKL    +  ++  ++ G  + G   
Sbjct: 159 DFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTD 218

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
           +AL + +EM  +G+ P    Y I++ GLC+  R  D       M      PD I+ N LL
Sbjct: 219 DALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALL 278

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
            G+C+ G I EAF L         V  +  Y++LIDGL R    +  Q+    M   GI 
Sbjct: 279 DGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIE 338

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
           PDV+ YTI++ G C++G +  A    N+M ++GL PD + Y   I G   +G   +A  L
Sbjct: 339 PDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSL 398

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
           Q E+      P   TY +L+ G+C+ G L+EA ++  +M   G  P  +T+ ++I    +
Sbjct: 399 QLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCK 458

Query: 571 MGDLRRGRDLFNNMLRKGLSPTL--------------VTYTVLIHAHAARGRLELAFMYF 616
            G+L   R LF  M   G +P+L               +   ++      G +  A+   
Sbjct: 459 AGELEEARHLFYKM-EIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLL 517

Query: 617 SEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNA 676
            ++   G+ P+++TYN LING C+ + I+ A+ LF +++ +G  P+  TY  LI+     
Sbjct: 518 MQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRV 577

Query: 677 GNWQEALRLYKEMLDREIEPDYCTHSALL 705
              ++A R+  +M+     P    +  L+
Sbjct: 578 DREEDAFRVLDQMVKNGCTPSSAVYKCLM 606



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 177/719 (24%), Positives = 307/719 (42%), Gaps = 107/719 (14%)

Query: 93  LVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVC 152
           +V  + R + +P +  RFF W  T+    R       ++++L +     + + ++E +  
Sbjct: 66  IVNDVMREQRRPELGFRFFIWT-TRRRSFRSWVTHNLVIDMLAKDDGFDTYWKILEELKN 124

Query: 153 VNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCN 212
            N+               +      +L+  Y K  M E+ +  F KM   G  PDV   N
Sbjct: 125 SNIQ--------------IPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYN 170

Query: 213 RIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR 272
            I+ V+      + A  VY  M +    P+  T+  +L+  CK G+  +AL++  EM  +
Sbjct: 171 SILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQK 230

Query: 273 G-----------------------------------CSPNGVTYNVLITGFSRNGELEQA 297
           G                                   C P+ +T N L+ GF + G++++A
Sbjct: 231 GIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEA 290

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L++   K G  +    Y+ +I G        E      +M   G+ P +  Y ILI G
Sbjct: 291 FALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRG 350

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
            C+ G V  A +   +M ++ + PD   YN L+ G+C  G + +A  L  E+   +  PT
Sbjct: 351 FCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPT 410

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
             TY  LI G+CR G L+ A+Q+   M N G  P ++T+  +++G CK G L  AR  F 
Sbjct: 411 SCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFY 470

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTS----------------EAYRLQEEMLAKGFPP 521
           +M   G  P  F   +Q  G  ++ DT+                +AY+L  ++   G  P
Sbjct: 471 KM-EIGKNPSLFLRLSQ--GADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVP 527

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           D++TYNVL++G CK  ++  A +L R++   G  PD +TY ++I     +        + 
Sbjct: 528 DIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVL 587

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS------------------------ 617
           + M++ G +P+   Y  L+     +G+L +AF  +                         
Sbjct: 588 DQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKG 647

Query: 618 ----------EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
                     EM  K     +  Y   + GLC+ RR ++A  +F+ ++E  +  N  +  
Sbjct: 648 ELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCV 707

Query: 668 ILINENCNAGNWQEALRLYKEMLDRE--IEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           +LIN  C  GN + A+ ++   L++   + P  C    LL   + +D   HA++ L  +
Sbjct: 708 MLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQ--LLRSLILQDKMKHALDLLNRM 764



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 149/566 (26%), Positives = 245/566 (43%), Gaps = 101/566 (17%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGG 166
           AL+ F  + TQ G+  +  ++  IL     SGL ++           ++H +L+ +   G
Sbjct: 220 ALKMFDEM-TQKGIPPNTMIYTIIL-----SGLCQAKR-------TDDVHRLLNTMKVSG 266

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
              C      + LL  + K   +++   +     + G +  +K  + +I  L       +
Sbjct: 267 --CCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDE 324

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
            +E  R M + GI+P +V Y  ++  FC+ G +  AL +L +M  RG SP+   YN LI 
Sbjct: 325 VQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIK 384

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           GF   G L++AR L  ++ K     ++ +Y  +ICG    GLL EA  +  +M   G +P
Sbjct: 385 GFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSP 444

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEM-LRKN--------------------------- 378
           ++ T+N LI GLCK G + +ARH F++M + KN                           
Sbjct: 445 SIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERL 504

Query: 379 --------------------VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
                               V+PDI++YN L+ G+C++ NI  AF LF EL+ +   P  
Sbjct: 505 CESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDS 564

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           VTY TLIDG  R    E A ++ + M+  G  P    Y  ++  SC+ G LS+A   + +
Sbjct: 565 VTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLK 624

Query: 479 MLRKGLQPDRFAYTTQIAGE-LKLGDTSEAYRLQEEMLAKGFPPDLITYNV--------- 528
            LR    P +   T ++A E  + G+  +A R   EM  K    ++  Y +         
Sbjct: 625 YLRS--LPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQAR 682

Query: 529 --------------------------LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
                                     L++GLCK G+LE A ++    +  GF+       
Sbjct: 683 RSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICN 742

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKG 588
            ++ + +    ++   DL N M   G
Sbjct: 743 QLLRSLILQDKMKHALDLLNRMNSAG 768



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/413 (23%), Positives = 185/413 (44%), Gaps = 39/413 (9%)

Query: 329 LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFF-EMLRKNVIPDIISYN 387
           ++E +N  E+ + + +AP L++   ++  + +  R  +   RFF    R+      +++N
Sbjct: 44  VMETVNPMEDALEK-LAPFLSSE--IVNDVMREQRRPELGFRFFIWTTRRRSFRSWVTHN 100

Query: 388 TLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
            ++    +       + + +EL++ N+     T++ LI    + G  E A +    M + 
Sbjct: 101 LVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDF 160

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
           G  PDV TY  +++   +     +A   +N+ML+    P+R  +   + G  K G T +A
Sbjct: 161 GCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDA 220

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
            ++ +EM  KG PP+ + Y +++ GLC+    ++ + LL  M   G  PD IT  +++  
Sbjct: 221 LKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDG 280

Query: 568 SLEMGDLRRGRDLFN-----------------------------------NMLRKGLSPT 592
             ++G +     L                                      M + G+ P 
Sbjct: 281 FCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPD 340

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
           +V YT+LI      G ++ A    ++M  +G+ P+   YNALI G C +  +D+A  L +
Sbjct: 341 VVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQL 400

Query: 653 DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           ++ +    P   TYTILI   C  G   EA +++ +M +    P   T +AL+
Sbjct: 401 EISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALI 453


>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
 gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 109/324 (33%), Positives = 184/324 (56%)

Query: 339 MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
           MV RG  P + TY  +I GLCK G    A   F +M      PD+++Y+T++   C+   
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 399 IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
           + EA  +F  ++++ + P + TYN+LI GLC +     A  +   M++  I+P+++T+++
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           ++N  CK GN+  AR     M   G++P+   Y++ + G     +  EA +L + M+ KG
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
             PD+ +YN+L++G CK   + EA +L  +M+  G  PD ++Y ++I    ++G LR   
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           DLF NML  G  P L TY++L+     +G L  AF  F  MQ   ++PN++ YN LI+ +
Sbjct: 241 DLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAM 300

Query: 639 CRLRRIDQAYGLFIDMEEEGILPN 662
           C+ R + +A  LF ++  +G+ PN
Sbjct: 301 CKSRNLKEARKLFSELFVQGLQPN 324



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 119/325 (36%), Positives = 183/325 (56%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           M+  G  PDV     II  L   G +V A  +++ MGE G +P +VTY+T++DS CK+  
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           + EAL++   M+ +G SPN  TYN LI G        +A  ++ +M+ L +  +  +++ 
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           +I  + ++G + EA  + + M   GV P + TY+ L+ G      V +AR  F  M+ K 
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
             PD+ SYN L+ GYC++  IGEA  LF+E+  + L P +V+YNTLIDGLC+ G L  A 
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
            L +NM+  G LPD+ TY+I+++G CK G L+ A   F  M    L+P+   Y   I   
Sbjct: 241 DLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAM 300

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDL 523
            K  +  EA +L  E+  +G  P++
Sbjct: 301 CKSRNLKEARKLFSELFVQGLQPNM 325



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 119/351 (33%), Positives = 191/351 (54%), Gaps = 1/351 (0%)

Query: 269 MQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
           M  RG  P+  TY  +I G  + GE   A GL + M + G +    +Y+ II    +   
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 329 LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNT 388
           + EAL++   M  +G++P + TYN LI GLC + R  +A     EM+  N++P+I++++ 
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 389 LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
           L+  +C+ GN+ EA  +   +    + P VVTY++L++G     ++  A++L + MI +G
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
             PDV +Y I++NG CK   +  A++ FNEM+ +GL PD  +Y T I G  +LG   EA+
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
            L + ML  G  PDL TY++L+ G CK G L +A  L R M      P+ + Y  +I A 
Sbjct: 241 DLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAM 300

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL-IHAHAARGRLELAFMYFSE 618
            +  +L+  R LF+ +  +GL P +  + +  I    A  R+    M  SE
Sbjct: 301 CKSRNLKEARKLFSELFVQGLQPNMKHWKLFEIWKRMAALRMNFLIMLSSE 351



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 114/325 (35%), Positives = 184/325 (56%)

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M+  G +   H+Y  II G  + G  V A  L ++M   G  P + TY+ +I  LCK  R
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           V++A   F  M  K + P+I +YN+L+ G C      EA  + +E+ S N++P +VT++ 
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           LI+  C+ G++  A+ + + M   G+ P+V+TY+ ++NG      +  AR+ F+ M+ KG
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
            +PD F+Y   I G  K     EA +L  EM+ +G  PD+++YN L+ GLC+LG L EA+
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
           +L + M+ +G +PD  TY+ ++    + G L +   LF  M    L P +V Y +LI A 
Sbjct: 241 DLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAM 300

Query: 604 AARGRLELAFMYFSEMQVKGIRPNV 628
                L+ A   FSE+ V+G++PN+
Sbjct: 301 CKSRNLKEARKLFSELFVQGLQPNM 325



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 101/320 (31%), Positives = 173/320 (54%)

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G +P + TY T+++  CK GE   A  L  +M   GC P+ VTY+ +I    ++  + +A
Sbjct: 5   GYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 64

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             +   M   G+  +  +YN +I G        EA  +  EM++  + P + T+++LI  
Sbjct: 65  LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINI 124

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
            CK G V +AR     M    V P++++Y++L+ GY     + EA  LFD + ++   P 
Sbjct: 125 FCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPD 184

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           V +YN LI+G C+   +  A+QL   MI+QG+ PD+++Y  +++G C++G L  A + F 
Sbjct: 185 VFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFK 244

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            ML  G  PD   Y+  + G  K G  ++A+RL   M +    P+++ YN+L+  +CK  
Sbjct: 245 NMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSR 304

Query: 538 SLEEANELLRKMVGDGFIPD 557
           +L+EA +L  ++   G  P+
Sbjct: 305 NLKEARKLFSELFVQGLQPN 324



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 96/295 (32%), Positives = 171/295 (57%)

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
           +R   P V TY T+I+GLC+ G+   A  L + M   G  PDV+TY+ +++  CK   ++
Sbjct: 3   ARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVN 62

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            A + F+ M  KG+ P+ F Y + I G        EA  +  EM++    P+++T+++L+
Sbjct: 63  EALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLI 122

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
           +  CK G++ EA  +L+ M   G  P+ +TY+S+++      ++   R LF+ M+ KG  
Sbjct: 123 NIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCK 182

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           P + +Y +LI+ +    R+  A   F+EM  +G+ P++++YN LI+GLC+L R+ +A+ L
Sbjct: 183 PDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDL 242

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           F +M   G LP+  TY+IL++  C  G   +A RL++ M    ++P+   ++ L+
Sbjct: 243 FKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILI 297



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 96/281 (34%), Positives = 150/281 (53%)

Query: 444 MINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGD 503
           M+ +G  PDV TYT ++NG CK+G    A   F +M   G QPD   Y+T I    K   
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 504 TSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTS 563
            +EA  +   M AKG  P++ TYN L+ GLC      EA+ +L +M+    +P+ +T++ 
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           +I+   + G++   R +   M   G+ P +VTY+ L++ ++ +  +  A   F  M  KG
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
            +P+V +YN LING C+ +RI +A  LF +M  +G+ P+  +Y  LI+  C  G  +EA 
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240

Query: 684 RLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
            L+K ML     PD CT+S LL     + Y   A     ++
Sbjct: 241 DLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAM 281



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 100/272 (36%), Positives = 157/272 (57%), Gaps = 6/272 (2%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE---FGIKP 241
           K   V + L +F+ M   G+ P++   N +I+ L +  FS + RE   M+ E     I P
Sbjct: 57  KDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCN--FS-RWREASAMLNEMMSLNIMP 113

Query: 242 SIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLI 301
           +IVT++ +++ FCKEG + EA  +L  M   G  PN VTY+ L+ G+S   E+ +AR L 
Sbjct: 114 NIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLF 173

Query: 302 RDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW 361
             M+  G K    SYN +I GY +   + EA  L  EM+ +G+ P + +YN LI GLC+ 
Sbjct: 174 DVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQL 233

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           GR+ +A   F  ML    +PD+ +Y+ LL G+C+ G + +AF LF  ++S  L P +V Y
Sbjct: 234 GRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMY 293

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
           N LID +C+  +L+ A++L   +  QG+ P++
Sbjct: 294 NILIDAMCKSRNLKEARKLFSELFVQGLQPNM 325



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 99/198 (50%), Gaps = 14/198 (7%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSV-----KAREVYRMMGEF 237
           Y+ ++ V +   +F+ M+  G  PDV + N +I     NG+       +A++++  M   
Sbjct: 160 YSLQAEVFEARKLFDVMITKGCKPDVFSYNILI-----NGYCKAKRIGEAKQLFNEMIHQ 214

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G+ P IV+YNT++D  C+ G ++EA +L   M   G  P+  TY++L+ GF + G L +A
Sbjct: 215 GLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKA 274

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L R M    LK +   YN +I    +   L EA  L  E+  +G+ P +  + +    
Sbjct: 275 FRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNMKHWKLFEI- 333

Query: 358 LCKWGRVSDARHRFFEML 375
              W R++  R  F  ML
Sbjct: 334 ---WKRMAALRMNFLIML 348



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 80/153 (52%), Gaps = 2/153 (1%)

Query: 158 ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
           + DV+I  G      +   ++L+  Y K   + +   +FN+M+  GL PD+ + N +I  
Sbjct: 172 LFDVMITKGCKP--DVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDG 229

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
           L   G   +A ++++ M   G  P + TY+ +LD FCK+G + +A  L   MQ     PN
Sbjct: 230 LCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPN 289

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
            V YN+LI    ++  L++AR L  ++   GL+
Sbjct: 290 MVMYNILIDAMCKSRNLKEARKLFSELFVQGLQ 322


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 123/402 (30%), Positives = 208/402 (51%), Gaps = 37/402 (9%)

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
           ++G  P L TYN++I  LCK G++  A   F EM  KN  PD+ +Y+TL+ G C+   + 
Sbjct: 167 SKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVD 226

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           EA  L DE+++   +P  VT+N LID L + GDL  A +L +NM  +G +P+ +TY  ++
Sbjct: 227 EAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLI 286

Query: 461 NGSCKMGNLSMAREFFNEML-----------------------------------RKGLQ 485
           +G C  G L  A     +M+                                    +G +
Sbjct: 287 HGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQK 346

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
            + + Y++ I+G  K G +  A RL +EM  KG  P+++ Y   + GLC+    +EA ++
Sbjct: 347 ANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDI 406

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
           L++M+  GF+P+  TY+S++    + GD ++   ++  M+ + +   +V  +VL++    
Sbjct: 407 LQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCE 466

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM--EEEGILPNK 663
            GRL  A   ++ M  +G++P+V+ Y+++I GLC +  +D+   LF +M  +E    P+ 
Sbjct: 467 SGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDV 526

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            TY IL N  C   N   A+ L   MLD   +PD  T +  L
Sbjct: 527 VTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFL 568



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 143/468 (30%), Positives = 230/468 (49%), Gaps = 23/468 (4%)

Query: 203 GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           G  P++   N IIK L   G   +A + +R M      P + TY+T+++  CKE  + EA
Sbjct: 169 GFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEA 228

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
           + LL EMQ  GC PN VT+NVLI   S+NG+L +A  L+ +M   G   +  +YN +I G
Sbjct: 229 VFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHG 288

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
              KG L +AL+L E+MV+    P   TY  +I GL K  R  D  H    M  +    +
Sbjct: 289 LCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKAN 348

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
              Y++L+ G  + G    A  L+ E+  +   P VV Y   IDGLCR    + A+ + +
Sbjct: 349 EYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQ 408

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            M+++G LP+  TY+ ++ G  K G+   A   + EM+ + ++ +    +  + G  + G
Sbjct: 409 EMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESG 468

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD--GFIPDHIT 560
              EA  +   ML +G  PD++ Y+ ++ GLC +GS+++  +L  +M        PD +T
Sbjct: 469 RLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVT 528

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAAR------GRLEL--- 611
           Y  + +A     +L R  DL N+ML +G  P  +T  + +     R      GRL L   
Sbjct: 529 YNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDEL 588

Query: 612 ------------AFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
                       A     EM ++ + P   T++ +I   C+ +RI + 
Sbjct: 589 VVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRET 636



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 192/426 (45%), Gaps = 59/426 (13%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K+  V++ + + ++M   G LP+    N +I  L  NG   +A ++   M   G  P+ V
Sbjct: 221 KERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEV 280

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TYNT++   C +G++ +AL LL +M    C PN VTY  +I G  +    E    ++  M
Sbjct: 281 TYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSM 340

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
            + G K + + Y+ +I G  ++G    A+ L +EM  +G  P +  Y   I GLC+  + 
Sbjct: 341 EERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKP 400

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN----------- 413
            +A     EML K  +P+  +Y++L+ G+ + G+  +A L++ E+ S++           
Sbjct: 401 DEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVL 460

Query: 414 ------------------------LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ-- 447
                                   L P VV Y+++I GLC  G ++   +L   M  Q  
Sbjct: 461 LNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEP 520

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD-------------------- 487
              PDV+TY I+ N  C+  NL+ A +  N ML +G  PD                    
Sbjct: 521 KSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQD 580

Query: 488 -RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA-NEL 545
            R      +   LK      A R+ EEML +  PP+  T++ ++   CK   + E  +E 
Sbjct: 581 GRLFLDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRETIDEC 640

Query: 546 LRKMVG 551
            R + G
Sbjct: 641 CRSLYG 646


>gi|125551633|gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
          Length = 793

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 175/677 (25%), Positives = 304/677 (44%), Gaps = 36/677 (5%)

Query: 31  CFSVHTYPSISE--SNNKDSVLNPESESYYKELIISTVEEKPWAFCNNRWVSDHFQAVVS 88
             S    PS+    S+ +D +L  +  S  K L +S   E  WA    RW SD   A  +
Sbjct: 88  AISSQPLPSLPAFLSSRRDELLRSDLPSLLKALELSGHWE--WALALLRWASDEGAADAA 145

Query: 89  DPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYW--- 145
             E++VR L R   +  +       +   PG + D   + T+L  L  +G    A     
Sbjct: 146 ALEMVVRALGR-EGQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFA 204

Query: 146 ------VVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKM 199
                 VV T+V  N+  +LDV    G S    + +L+                    +M
Sbjct: 205 ELRRQGVVPTIVTYNV--VLDVYGRMGRSWPRIVALLE--------------------EM 242

Query: 200 LRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEM 259
              G+ PD    + +I     +G   +A   +  +   G  P +VTYN +L  F K G  
Sbjct: 243 RAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNY 302

Query: 260 QEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI 319
            EAL +L EM+  GC P+ VTYN L   ++R G  E+A   +  M   GL  +  +YN +
Sbjct: 303 TEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTV 362

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           +  Y+  G + EAL L + M   G  P + TYN++   L K  R +       EM R   
Sbjct: 363 MTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGC 422

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
            P+ +++NT+L    + G       + + ++S  +  +  TYNTLI    R G    A +
Sbjct: 423 TPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFK 482

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           + + MI+ G  P + TY  ++N   + G+ S A+   ++ML+ G +P+  +Y+  +    
Sbjct: 483 MYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYA 542

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           K G+ +    +++E+      P  +    LV    K   LE   +  +++   G+ PD +
Sbjct: 543 KGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLV 602

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
            + S++    + G   +  ++F+++ + GLSP L+TY  L+  +A       A     ++
Sbjct: 603 IFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQL 662

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
           +   ++P+V++YN +ING C+   I +A  +  +M  +G+ P   TY  L+    +   +
Sbjct: 663 KSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMF 722

Query: 680 QEALRLYKEMLDREIEP 696
            EA  +   M+   ++P
Sbjct: 723 NEAREVVNYMIHHNLKP 739



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 138/524 (26%), Positives = 245/524 (46%), Gaps = 25/524 (4%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVET------VVCVNMHGILDVLIGGGLSSCVS 172
           GV+ D+F   T++      GLL  A    E       V CV  +  L  + G   +   +
Sbjct: 246 GVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEA 305

Query: 173 IKIL---------------DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
           +++L               + L   Y +    E+     + M   GLLP+    N ++  
Sbjct: 306 LRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTA 365

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
             + G   +A  ++  M + G  P++ TYN +     K+      LE+L EM   GC+PN
Sbjct: 366 YANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPN 425

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
            VT+N ++    + G  +    ++  M   G+++S  +YN +I  Y   G    A  + +
Sbjct: 426 RVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYD 485

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
           EM++ G  P L TYN L+  L + G  S A+    +ML+    P+  SY+ LL  Y + G
Sbjct: 486 EMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGG 545

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
           N      +  E+    + P+ V   TL+    +   LE  ++  + +  QG  PD++ + 
Sbjct: 546 NAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFN 605

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
            M+    K G  S A E F+ + + GL PD   Y + +    K  ++ EA ++ +++ + 
Sbjct: 606 SMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSS 665

Query: 518 GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII--HASLEMGDLR 575
              PD+++YN +++G CK G ++EA  +L +M+ DG  P  +TY +++  +ASLEM    
Sbjct: 666 QVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEM--FN 723

Query: 576 RGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
             R++ N M+   L P  +TY  ++ ++    R + A  + SE+
Sbjct: 724 EAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEI 767



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 139/550 (25%), Positives = 242/550 (44%), Gaps = 36/550 (6%)

Query: 192 CLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLD 251
           C L+    L  G   DV+    ++  L   G   +A +++  +   G+ P+IVTYN +LD
Sbjct: 164 CDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLD 223

Query: 252 SFCKEG-EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
            + + G      + LL EM+  G  P+  T + +I    R+G L+QA     D+   G  
Sbjct: 224 VYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHV 283

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
               +YN ++  + + G   EAL + +EM   G  P   TYN L     + G   +A   
Sbjct: 284 PCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKC 343

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
              M  K ++P+  +YNT++  Y   G + EA  LFD ++    VP V TYN +   L +
Sbjct: 344 LDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGK 403

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
                   ++ E M   G  P+ +T+  M+    K G         N M   G++  R  
Sbjct: 404 KSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDT 463

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           Y T I+   + G  + A+++ +EM++ GF P L TYN L++ L + G    A  ++ KM+
Sbjct: 464 YNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKML 523

Query: 551 GDGFIPDHITYT-----------------------------------SIIHASLEMGDLR 575
            +GF P+  +Y+                                   +++ A+ +   L 
Sbjct: 524 KNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLE 583

Query: 576 RGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALI 635
                F  +  +G  P LV +  ++  +A  G    A   F  ++  G+ P++ITYN+L+
Sbjct: 584 GVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLM 643

Query: 636 NGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIE 695
           +   +     +A  +   ++   + P+  +Y  +IN  C  G  +EA R+  EM+   + 
Sbjct: 644 DMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMA 703

Query: 696 PDYCTHSALL 705
           P   T+  L+
Sbjct: 704 PCVVTYHTLV 713



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 125/464 (26%), Positives = 209/464 (45%), Gaps = 9/464 (1%)

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM-LK 306
           ++L +    G  + AL LL      G + +     +++    R G+ +    L+ +M L 
Sbjct: 115 SLLKALELSGHWEWALALLRWASDEGAA-DAAALEMVVRALGREGQHDVVCDLLDEMPLP 173

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
            G ++   +Y  ++   S  G    AL L  E+  +GV PT+ TYN++   L  +GR+  
Sbjct: 174 PGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVV---LDVYGRMGR 230

Query: 367 ARHRFF----EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           +  R      EM    V PD  + +T++    R G + +A   F++L++R  VP VVTYN
Sbjct: 231 SWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYN 290

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            L+    + G+   A ++ + M + G  PD +TY  +     + G    A +  + M  K
Sbjct: 291 ALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSK 350

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           GL P+ F Y T +     +G   EA  L + M   G+ P++ TYN++   L K       
Sbjct: 351 GLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAM 410

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            E+L +M   G  P+ +T+ +++    + G       + N M   G+  +  TY  LI A
Sbjct: 411 LEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISA 470

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
           +   G    AF  + EM   G  P + TYNAL+N L R      A  +   M + G  PN
Sbjct: 471 YGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPN 530

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
             +Y++L+      GN      + KE+    I P +     L++
Sbjct: 531 DQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVI 574



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/277 (27%), Positives = 125/277 (45%), Gaps = 4/277 (1%)

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEM-LRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
           D     ++V    + G   +  +  +EM L  G + D  AYTT +    + G    A +L
Sbjct: 143 DAAALEMVVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQL 202

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLG-SLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
             E+  +G  P ++TYNV++    ++G S      LL +M   G  PD  T +++I A  
Sbjct: 203 FAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACG 262

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
             G L +    F ++  +G  P +VTY  L+      G    A     EM+  G +P+ +
Sbjct: 263 RDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAV 322

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           TYN L     R    ++A      M  +G+LPN +TY  ++    N G   EAL L+  M
Sbjct: 323 TYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRM 382

Query: 690 LDREIEPDYCTHSALLLKQLDKDYKVHA-VEYLESLT 725
                 P+  T++ L+   L K  +  A +E LE ++
Sbjct: 383 KKNGYVPNVNTYN-LIFGMLGKKSRFTAMLEMLEEMS 418


>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
 gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
           [Oryza sativa Japonica Group]
 gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
 gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 793

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 175/677 (25%), Positives = 304/677 (44%), Gaps = 36/677 (5%)

Query: 31  CFSVHTYPSISE--SNNKDSVLNPESESYYKELIISTVEEKPWAFCNNRWVSDHFQAVVS 88
             S    PS+    S+ +D +L  +  S  K L +S   E  WA    RW SD   A  +
Sbjct: 88  AISSQPLPSLPAFLSSRRDELLRSDLPSLLKALELSGHWE--WALALLRWASDEGAADAA 145

Query: 89  DPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYW--- 145
             E++VR L R   +  +       +   PG + D   + T+L  L  +G    A     
Sbjct: 146 ALEMVVRALGR-EGQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFA 204

Query: 146 ------VVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKM 199
                 VV T+V  N+  +LDV    G S    + +L+                    +M
Sbjct: 205 ELRRQGVVPTIVTYNV--VLDVYGRMGRSWPRIVALLE--------------------EM 242

Query: 200 LRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEM 259
              G+ PD    + +I     +G   +A   +  +   G  P +VTYN +L  F K G  
Sbjct: 243 RAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNY 302

Query: 260 QEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI 319
            EAL +L EM+  GC P+ VTYN L   ++R G  E+A   +  M   GL  +  +YN +
Sbjct: 303 TEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTV 362

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           +  Y+  G + EAL L + M   G  P + TYN++   L K  R +       EM R   
Sbjct: 363 MTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGC 422

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQ 439
            P+ +++NT+L    + G       + + ++S  +  +  TYNTLI    R G    A +
Sbjct: 423 TPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFK 482

Query: 440 LKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL 499
           + + MI+ G  P + TY  ++N   + G+ S A+   ++ML+ G +P+  +Y+  +    
Sbjct: 483 MYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYA 542

Query: 500 KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHI 559
           K G+ +    +++E+      P  +    LV    K   LE   +  +++   G+ PD +
Sbjct: 543 KGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLV 602

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
            + S++    + G   +  ++F+++ + GLSP L+TY  L+  +A       A     ++
Sbjct: 603 IFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQL 662

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
           +   ++P+V++YN +ING C+   I +A  +  +M  +G+ P   TY  L+    +   +
Sbjct: 663 KSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMF 722

Query: 680 QEALRLYKEMLDREIEP 696
            EA  +   M+   ++P
Sbjct: 723 NEAREVVNYMIHHNLKP 739



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 138/524 (26%), Positives = 245/524 (46%), Gaps = 25/524 (4%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVET------VVCVNMHGILDVLIGGGLSSCVS 172
           GV+ D+F   T++      GLL  A    E       V CV  +  L  + G   +   +
Sbjct: 246 GVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEA 305

Query: 173 IKIL---------------DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
           +++L               + L   Y +    E+     + M   GLLP+    N ++  
Sbjct: 306 LRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTA 365

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
             + G   +A  ++  M + G  P++ TYN +     K+      LE+L EM   GC+PN
Sbjct: 366 YANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPN 425

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
            VT+N ++    + G  +    ++  M   G+++S  +YN +I  Y   G    A  + +
Sbjct: 426 RVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYD 485

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
           EM++ G  P L TYN L+  L + G  S A+    +ML+    P+  SY+ LL  Y + G
Sbjct: 486 EMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGG 545

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
           N      +  E+    + P+ V   TL+    +   LE  ++  + +  QG  PD++ + 
Sbjct: 546 NAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFN 605

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
            M+    K G  S A E F+ + + GL PD   Y + +    K  ++ EA ++ +++ + 
Sbjct: 606 SMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSS 665

Query: 518 GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII--HASLEMGDLR 575
              PD+++YN +++G CK G ++EA  +L +M+ DG  P  +TY +++  +ASLEM    
Sbjct: 666 QVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEM--FN 723

Query: 576 RGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
             R++ N M+   L P  +TY  ++ ++    R + A  + SE+
Sbjct: 724 EAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEI 767



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 139/550 (25%), Positives = 242/550 (44%), Gaps = 36/550 (6%)

Query: 192 CLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLD 251
           C L+    L  G   DV+    ++  L   G   +A +++  +   G+ P+IVTYN +LD
Sbjct: 164 CDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLD 223

Query: 252 SFCKEG-EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
            + + G      + LL EM+  G  P+  T + +I    R+G L+QA     D+   G  
Sbjct: 224 VYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHV 283

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
               +YN ++  + + G   EAL + +EM   G  P   TYN L     + G   +A   
Sbjct: 284 PCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKC 343

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
              M  K ++P+  +YNT++  Y   G + EA  LFD ++    VP V TYN +   L +
Sbjct: 344 LDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGK 403

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
                   ++ E M   G  P+ +T+  M+    K G         N M   G++  R  
Sbjct: 404 KSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDT 463

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           Y T I+   + G  + A+++ +EM++ GF P L TYN L++ L + G    A  ++ KM+
Sbjct: 464 YNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKML 523

Query: 551 GDGFIPDHITYT-----------------------------------SIIHASLEMGDLR 575
            +GF P+  +Y+                                   +++ A+ +   L 
Sbjct: 524 KNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLE 583

Query: 576 RGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALI 635
                F  +  +G  P LV +  ++  +A  G    A   F  ++  G+ P++ITYN+L+
Sbjct: 584 GVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLM 643

Query: 636 NGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIE 695
           +   +     +A  +   ++   + P+  +Y  +IN  C  G  +EA R+  EM+   + 
Sbjct: 644 DMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMA 703

Query: 696 PDYCTHSALL 705
           P   T+  L+
Sbjct: 704 PCVVTYHTLV 713



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 125/464 (26%), Positives = 209/464 (45%), Gaps = 9/464 (1%)

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM-LK 306
           ++L +    G  + AL LL      G + +     +++    R G+ +    L+ +M L 
Sbjct: 115 SLLKALELSGHWEWALALLRWASDEGAA-DAAALEMVVRALGREGQHDVVCDLLDEMPLP 173

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
            G ++   +Y  ++   S  G    AL L  E+  +GV PT+ TYN++   L  +GR+  
Sbjct: 174 PGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVV---LDVYGRMGR 230

Query: 367 ARHRFF----EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           +  R      EM    V PD  + +T++    R G + +A   F++L++R  VP VVTYN
Sbjct: 231 SWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYN 290

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            L+    + G+   A ++ + M + G  PD +TY  +     + G    A +  + M  K
Sbjct: 291 ALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSK 350

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           GL P+ F Y T +     +G   EA  L + M   G+ P++ TYN++   L K       
Sbjct: 351 GLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAM 410

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            E+L +M   G  P+ +T+ +++    + G       + N M   G+  +  TY  LI A
Sbjct: 411 LEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISA 470

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
           +   G    AF  + EM   G  P + TYNAL+N L R      A  +   M + G  PN
Sbjct: 471 YGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPN 530

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
             +Y++L+      GN      + KE+    I P +     L++
Sbjct: 531 DQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVI 574



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 136/306 (44%), Gaps = 5/306 (1%)

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM-LR 481
           +L+  L   G  E A  L     ++G   D     ++V    + G   +  +  +EM L 
Sbjct: 115 SLLKALELSGHWEWALALLRWASDEGA-ADAAALEMVVRALGREGQHDVVCDLLDEMPLP 173

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG-SLE 540
            G + D  AYTT +    + G    A +L  E+  +G  P ++TYNV++    ++G S  
Sbjct: 174 PGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWP 233

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
               LL +M   G  PD  T +++I A    G L +    F ++  +G  P +VTY  L+
Sbjct: 234 RIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALL 293

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                 G    A     EM+  G +P+ +TYN L     R    ++A      M  +G+L
Sbjct: 294 QVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLL 353

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHA-VE 719
           PN +TY  ++    N G   EAL L+  M      P+  T++ L+   L K  +  A +E
Sbjct: 354 PNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYN-LIFGMLGKKSRFTAMLE 412

Query: 720 YLESLT 725
            LE ++
Sbjct: 413 MLEEMS 418


>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 126/429 (29%), Positives = 229/429 (53%), Gaps = 1/429 (0%)

Query: 277 NGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLE 336
           N + Y+ + T F  N +++ A  L   +L     ++A  +N I+    +       L+L 
Sbjct: 33  NFIPYSSISTTFHSN-DVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLS 91

Query: 337 EEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS 396
           ++M   G+ P   T+NILI   C+ G +  A     ++L+    PDII+ NT + G+C  
Sbjct: 92  QQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLK 151

Query: 397 GNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
           G I +A    D+L +       V+Y TLI+GLC+ G+   A QL   +  + +  + + Y
Sbjct: 152 GQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMY 211

Query: 457 TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA 516
             +++G  K  +++ A + ++EM+ K + PD   Y+  I G   +G   +A  L  +M+ 
Sbjct: 212 NTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMIL 271

Query: 517 KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
           +   PD+ T+N+LV G CK G L++A  +L  M+     P+  T+ +++    +   ++ 
Sbjct: 272 ENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKE 331

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
           G+ +F  M+++G+ P +VTY  L+  +    ++  A   F+ M  +G+  NV +YN +IN
Sbjct: 332 GKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMIN 391

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
           G C+++++D+A  LFI+M  + I+P+  TY  LI+  C +G    A +L  EM DR   P
Sbjct: 392 GFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPP 451

Query: 697 DYCTHSALL 705
           +  T++++L
Sbjct: 452 NIITYNSIL 460



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 130/420 (30%), Positives = 226/420 (53%), Gaps = 12/420 (2%)

Query: 203 GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           G+ P+    N +I      G    A  V   + + G +P I+T NT +  FC +G++ +A
Sbjct: 98  GINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQA 157

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
           L    ++   G   + V+Y  LI G  + GE   A  L+R +    ++++A  YN +I G
Sbjct: 158 LNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDG 217

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
            S+   + +A +L  EMV + ++P + TY+ LI G    G++ DA   F +M+ +N+ PD
Sbjct: 218 MSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPD 277

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
           + ++N L+ G+C+ G + +A  + D +  +++ P V T+NTL+DG C+   ++  + +  
Sbjct: 278 VYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFA 337

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            M+ QGI P+V+TY  +++G C +  ++ A++ FN M ++G+  +  +Y   I G  K+ 
Sbjct: 338 MMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIK 397

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
              +A +L  EM  K   PD++TYN L+ GLCK G +  A +L+ +M   G  P+ ITY 
Sbjct: 398 KVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYN 457

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
           SI++A            L   +  +G+ P + T T+LI      G+LE A   F ++ VK
Sbjct: 458 SILNA------------LLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAARKVFEDLLVK 505



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 133/445 (29%), Positives = 227/445 (51%), Gaps = 12/445 (2%)

Query: 246 YNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDML 305
           +N +L S  K       L L  +M+  G +PN VT+N+LI  F + G +  A  ++  +L
Sbjct: 71  FNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKIL 130

Query: 306 KLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVS 365
           K+G +    + N  I G+  KG + +ALN  +++V  G      +Y  LI GLCK G   
Sbjct: 131 KMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETR 190

Query: 366 DARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLI 425
            A      +  K V  + + YNT++ G  +  ++ +AF L+ E+ ++ + P VVTY+ LI
Sbjct: 191 AALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALI 250

Query: 426 DGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
            G    G L+ A  L   MI + I PDV T+ I+V+G CK G L  A+   + M+ + ++
Sbjct: 251 RGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIK 310

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           P+   + T + G  K     E   +   M+ +G  P+++TY  L+ G C +  + +A ++
Sbjct: 311 PNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKI 370

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
              M   G   +  +Y  +I+   ++  + +   LF  M  K + P +VTY  LI     
Sbjct: 371 FNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCK 430

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
            G++  AF   +EM  +G  PN+ITYN+++N             L   ++++GI PN +T
Sbjct: 431 SGKISYAFQLVNEMHDRGQPPNIITYNSILN------------ALLTKLKDQGIQPNMHT 478

Query: 666 YTILINENCNAGNWQEALRLYKEML 690
            TILI   C +G  + A ++++++L
Sbjct: 479 DTILIKGLCQSGKLEAARKVFEDLL 503



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/412 (29%), Positives = 212/412 (51%), Gaps = 12/412 (2%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
            ++L+  + +  ++     V  K+L+ G  PD+   N  IK     G   +A   +  + 
Sbjct: 106 FNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLV 165

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
             G     V+Y T+++  CK GE + AL+LL  + G+    N V YN +I G S++  + 
Sbjct: 166 ALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVN 225

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
            A  L  +M+   +     +Y+ +I G+   G L +A++L  +M+   + P + T+NIL+
Sbjct: 226 DAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILV 285

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
            G CK GR+  A++    M+ +++ P++ ++NTL+ G+C+   + E   +F  +  + + 
Sbjct: 286 DGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIK 345

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P VVTY +L+DG C    +  A+++   M  +G+  +V +Y IM+NG CK+  +  A + 
Sbjct: 346 PNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKL 405

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
           F EM  K + PD   Y + I G  K G  S A++L  EM  +G PP++ITYN ++     
Sbjct: 406 FIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSIL----- 460

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK 587
                  N LL K+   G  P+  T T +I    + G L   R +F ++L K
Sbjct: 461 -------NALLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAARKVFEDLLVK 505


>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 149/513 (29%), Positives = 241/513 (46%), Gaps = 1/513 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRII-KVLRDNGFSVKAREVYRMMGEFGIKPSIVTYN 247
           +++ L +F  M R   LP VK+   ++  ++R   ++     V  M    GI+   +T N
Sbjct: 57  IDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLGIEADTITLN 116

Query: 248 TMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKL 307
            +++  C+   +     +L  M   G  P  +T   LI G    G + QA GL   M K+
Sbjct: 117 IVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADHMEKM 176

Query: 308 GLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
              +  ++Y  +I G  + G  + A+    +M  R   P +  Y+ ++ GLCK G VS+A
Sbjct: 177 WYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEA 236

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
            +   EM  K V P++++Y  L+ G C  G   EA  L DE+    + P +   N L+D 
Sbjct: 237 LNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDA 296

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
            C+ G +  A+ +   MI  G  PDV TY  +++  C    ++ A   F+ M+ +G  PD
Sbjct: 297 FCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPD 356

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
              +T+ I G  K  + ++A  L EEM   GF PD+ T+  L+ G C+ G    A EL  
Sbjct: 357 IVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFL 416

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
            M   G +P+  T   I+    +   L     L   M +  L   +V Y++L+    + G
Sbjct: 417 NMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAG 476

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
           +L  A+  FS +  KG++ NV  Y  +I GLC+   +D+A  L I+MEE G LPN  TY 
Sbjct: 477 KLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYN 536

Query: 668 ILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
           + +           +++    M D+    D  T
Sbjct: 537 VFVQGLLTKKEIARSIKYLTIMRDKGFSVDAAT 569



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 138/497 (27%), Positives = 243/497 (48%), Gaps = 1/497 (0%)

Query: 226 KAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM-QGRGCSPNGVTYNVL 284
           +A ++++ M      PS+  +  +L +  +      A+ L+  M    G   + +T N++
Sbjct: 59  EALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLGIEADTITLNIV 118

Query: 285 ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV 344
           I    R   +     ++  M KLGL+ +  +   +I G   +G + +A+ L + M     
Sbjct: 119 INCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADHMEKMWY 178

Query: 345 APTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
              + TY +LI GLCK G    A     +M  +N  P+++ Y+T++ G C+ G + EA  
Sbjct: 179 PLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALN 238

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
           L  E+  + + P +VTY  LI GLC +G  + A  L + M+  G+ PD+    I+V+  C
Sbjct: 239 LCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFC 298

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLI 524
           K G +  A+     M+  G  PD F Y + I         +EA R+   M+++G  PD++
Sbjct: 299 KEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIV 358

Query: 525 TYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM 584
            +  L+HG CK  ++ +A  LL +M   GF+PD  T+T++I    + G     ++LF NM
Sbjct: 359 VFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNM 418

Query: 585 LRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRI 644
            + G  P L T  V++        L  A      M+   +  N++ Y+ L++G+C   ++
Sbjct: 419 HKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKL 478

Query: 645 DQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL 704
           + A+ LF  +  +G+  N Y YTI+I   C  G+  +A  L   M +    P+ CT++  
Sbjct: 479 NAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVF 538

Query: 705 LLKQLDKDYKVHAVEYL 721
           +   L K     +++YL
Sbjct: 539 VQGLLTKKEIARSIKYL 555



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 137/450 (30%), Positives = 220/450 (48%), Gaps = 5/450 (1%)

Query: 222 GFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTY 281
           GFSV        M + G++P+++T  T+++  C +G + +A+ L   M+      +  TY
Sbjct: 131 GFSVLGT-----MFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADHMEKMWYPLDVYTY 185

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
            VLI G  + G+   A G +R M +   K +   Y+ I+ G  + GL+ EALNL  EM  
Sbjct: 186 GVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNG 245

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
           +GV P L TY  LI GLC +GR  +A     EM++  + PD+   N L+  +C+ G + +
Sbjct: 246 KGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQ 305

Query: 402 AFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           A  +   +      P V TYN+LI   C    +  A ++   M+++G LPD++ +T +++
Sbjct: 306 AKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIH 365

Query: 462 GSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPP 521
           G CK  N++ A     EM + G  PD   +TT I G  + G    A  L   M   G  P
Sbjct: 366 GWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVP 425

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           +L T  V++ GLCK   L EA  L + M       + + Y+ ++      G L    +LF
Sbjct: 426 NLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELF 485

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
           +++  KGL   +  YT++I     +G L+ A      M+  G  PN  TYN  + GL   
Sbjct: 486 SSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTK 545

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
           + I ++      M ++G   +  T   +IN
Sbjct: 546 KEIARSIKYLTIMRDKGFSVDAATTEFIIN 575



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 122/395 (30%), Positives = 206/395 (52%)

Query: 207 DVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELL 266
           DV     +I  L   G ++ A    R M E   KP++V Y+T++D  CK+G + EAL L 
Sbjct: 181 DVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLC 240

Query: 267 WEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEK 326
            EM G+G  PN VTY  LI G    G  ++A  L+ +M+K+G++      N ++  + ++
Sbjct: 241 SEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKE 300

Query: 327 GLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISY 386
           G +++A ++   M+  G  P + TYN LI+  C   ++++A   F  M+ +  +PDI+ +
Sbjct: 301 GKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVF 360

Query: 387 NTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMIN 446
            +L++G+C+  NI +A  L +E+     VP V T+ TLI G C+ G    A++L  NM  
Sbjct: 361 TSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHK 420

Query: 447 QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSE 506
            G +P++ T  ++++G CK   LS A      M +  L  +   Y+  + G    G  + 
Sbjct: 421 YGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNA 480

Query: 507 AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
           A+ L   +  KG   ++  Y +++ GLCK GSL++A +LL  M  +G +P++ TY   + 
Sbjct: 481 AWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQ 540

Query: 567 ASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
             L   ++ R       M  KG S    T   +I+
Sbjct: 541 GLLTKKEIARSIKYLTIMRDKGFSVDAATTEFIIN 575


>gi|413926774|gb|AFW66706.1| hypothetical protein ZEAMMB73_789977 [Zea mays]
          Length = 642

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 154/528 (29%), Positives = 247/528 (46%), Gaps = 75/528 (14%)

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
           I+  LR++   +    +Y+ +   G +P + T N +L + C  G M+ A  +   M  R 
Sbjct: 117 ILTALRESRLDL-VEALYKDLLLAGAQPDVFTRNLLLRALCDAGRMELAQRVFEAMPVR- 174

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
              N  ++ +L  G+ R G    A  ++  M  + L V     N ++ G+ ++GL+ EA 
Sbjct: 175 ---NEFSFGILARGYCRAGRSVDALKVLDGMPSMNLVVC----NTVVAGFCKEGLVEEAE 227

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN-----VIPDIISYNT 388
            L E M  +G+AP + T+N  I  LCK GRV DA +R F+ ++++       PD ++++ 
Sbjct: 228 RLVERMRVQGLAPNVVTFNSRISALCKAGRVLDA-YRIFKDMQEDWQHGLPRPDQVTFDV 286

Query: 389 LLYGYC-----------------------------------RSGNIGEAFLLFDELRSRN 413
           +L G+C                                   R+G +GEA  L  E+    
Sbjct: 287 MLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAHELLREMAHER 346

Query: 414 LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL-PDVITYTIMVNGSCKMGNLSMA 472
           + P   TYN ++ GLC+ G    A+++ EN I  G++ PDV+TYT +++  C  GN++ A
Sbjct: 347 IHPNSYTYNIIVSGLCKEGKAFDARRV-ENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAA 405

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
               +EM +KG  P+ F Y   +    + G T+EA RL E M  KG+  D    N+++ G
Sbjct: 406 NRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMSEKGYSLDTAGCNIIIDG 465

Query: 533 LCKLGSLEEANELLRKM----------VGDGFI-------------PDHITYTSIIHASL 569
           LC+   L+ A  ++  M          +G+ F+             PD ITY+ +I A  
Sbjct: 466 LCRNSKLDVAMGIVDGMWEEGSTALGRLGNSFLSVVSDSSISQRCLPDRITYSILISALC 525

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
           + G     +     M+ K +SP  V Y   IH +   G+  LA     +M+ KG  P+  
Sbjct: 526 KEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTR 585

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAG 677
           TYN LI G     + D+   L  +MEE+G+ PN  TY  LI   C  G
Sbjct: 586 TYNLLIRGFEEKHKSDEIMKLMSEMEEKGVSPNVLTYNSLIKSFCQQG 633



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 134/435 (30%), Positives = 221/435 (50%), Gaps = 18/435 (4%)

Query: 211 CNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQ 270
           CN ++      G   +A  +   M   G+ P++VT+N+ + + CK G + +A  +  +MQ
Sbjct: 210 CNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIFKDMQ 269

Query: 271 ---GRGCS-PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEK 326
                G   P+ VT++V+++GF   G +++AR L+  M   G      SYN  + G    
Sbjct: 270 EDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRN 329

Query: 327 GLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI-PDIIS 385
           G + EA  L  EM    + P   TYNI++ GLCK G+  DAR R    +R  V+ PD+++
Sbjct: 330 GRVGEAHELLREMAHERIHPNSYTYNIIVSGLCKEGKAFDAR-RVENFIRSGVMSPDVVT 388

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           Y +LL+ YC  GNI  A  + DE+  +   P   TYN L+  L R G    A++L E M 
Sbjct: 389 YTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMS 448

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
            +G   D     I+++G C+   L +A    + M  +G        +T +    +LG++ 
Sbjct: 449 EKGYSLDTAGCNIIIDGLCRNSKLDVAMGIVDGMWEEG--------STALG---RLGNSF 497

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
            +  + +  +++   PD ITY++L+  LCK G  +EA + L +M+     PD + Y + I
Sbjct: 498 LSV-VSDSSISQRCLPDRITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFI 556

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
           H   + G       +  +M +KG +P+  TY +LI     + + +      SEM+ KG+ 
Sbjct: 557 HGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGVS 616

Query: 626 PNVITYNALINGLCR 640
           PNV+TYN+LI   C+
Sbjct: 617 PNVLTYNSLIKSFCQ 631



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 132/463 (28%), Positives = 211/463 (45%), Gaps = 45/463 (9%)

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           P    YN LI    R   L+    L +D+L  G +    + N ++    + G +  A  +
Sbjct: 108 PPTPVYNRLILTALRESRLDLVEALYKDLLLAGAQPDVFTRNLLLRALCDAGRMELAQRV 167

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCR 395
            E M  R       ++ IL  G C+ GR  DA      M   N    ++  NT++ G+C+
Sbjct: 168 FEAMPVRNEF----SFGILARGYCRAGRSVDALKVLDGMPSMN----LVVCNTVVAGFCK 219

Query: 396 SGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL----EVAQQLKENMINQGILP 451
            G + EA  L + +R + L P VVT+N+ I  LC+ G +     + + ++E+  +    P
Sbjct: 220 EGLVEEAERLVERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIFKDMQEDWQHGLPRP 279

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           D +T+ +M++G C  G +  AR   + M   G      +Y   ++G ++ G   EA+ L 
Sbjct: 280 DQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAHELL 339

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
            EM  +   P+  TYN++V GLCK G   +A  +   +      PD +TYTS++HA    
Sbjct: 340 REMAHERIHPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSK 399

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
           G++     + + M +KG +P   TY VL+ +    GR   A      M  KG   +    
Sbjct: 400 GNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMSEKGYSLDTAGC 459

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEG-----------------------ILPNKYTYTI 668
           N +I+GLCR  ++D A G+   M EEG                        LP++ TY+I
Sbjct: 460 NIIIDGLCRNSKLDVAMGIVDGMWEEGSTALGRLGNSFLSVVSDSSISQRCLPDRITYSI 519

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPD----------YCTH 701
           LI+  C  G + EA +   EM+ ++I PD          YC H
Sbjct: 520 LISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKH 562



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 31/199 (15%)

Query: 515 LAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL 574
           LA   PP    YN L+    +   L+    L + ++  G  PD  T   ++ A  + G +
Sbjct: 102 LASAPPPPTPVYNRLILTALRESRLDLVEALYKDLLLAGAQPDVFTRNLLLRALCDAGRM 161

Query: 575 RRGRDLFNNM---------------LRKGLS----------PT--LVTYTVLIHAHAARG 607
              + +F  M                R G S          P+  LV    ++      G
Sbjct: 162 ELAQRVFEAMPVRNEFSFGILARGYCRAGRSVDALKVLDGMPSMNLVVCNTVVAGFCKEG 221

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE---GI-LPNK 663
            +E A      M+V+G+ PNV+T+N+ I+ LC+  R+  AY +F DM+E+   G+  P++
Sbjct: 222 LVEEAERLVERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIFKDMQEDWQHGLPRPDQ 281

Query: 664 YTYTILINENCNAGNWQEA 682
            T+ ++++  C+AG   EA
Sbjct: 282 VTFDVMLSGFCDAGFVDEA 300


>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
 gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
          Length = 447

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 153/445 (34%), Positives = 221/445 (49%), Gaps = 16/445 (3%)

Query: 261 EALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPII 320
           +AL L  E+     +PN  TYNVLI GF + G++ QA  +  DM   GL  +A + N ++
Sbjct: 8   QALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLL 67

Query: 321 CGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI 380
            G  E G +  AL L  EM      PT A++NIL+ G    GR   A   F EM    V 
Sbjct: 68  LGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGR---AIEFFKEMKASGVE 124

Query: 381 PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQL 440
           PD+ SY+ LL     SG + EA  LF  +      P ++TYN L+DG C+ G    AQ L
Sbjct: 125 PDLESYHILLSALSDSGRMAEAHALFSAMTCS---PDIMTYNVLMDGYCKIGQTYEAQSL 181

Query: 441 KENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELK 500
            + ++  G  P+V TY+I++N  CK+  +  A E F +M+     P+   + T IAG  K
Sbjct: 182 MKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCK 241

Query: 501 LGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL-GSLEEANELLRKMVGDGFIPDHI 559
            G   +A +L  EM   G    ++TYN L+  LCK  G +  A +L  K+ G G  P  +
Sbjct: 242 AGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIV 301

Query: 560 TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEM 619
           TY S+I    E  +   G  L  +M  +G  P ++TY  LI    +  R+E A   F+ M
Sbjct: 302 TYNSLIQGFSERAN--DGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGM 359

Query: 620 QVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW 679
                 PNV T+N LI GLC  +++++A  +   M      P+  T+  +I   C AG  
Sbjct: 360 ACA---PNVTTFNFLIRGLCAQKKVEEARNILDRMTA----PDMTTFNTIILAFCKAGAM 412

Query: 680 QEALRLYKEMLDREIEPDYCTHSAL 704
            +A  + K+ML     P+  T  AL
Sbjct: 413 HDAREVMKDMLKHGFYPNTYTTYAL 437



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/413 (31%), Positives = 215/413 (52%), Gaps = 16/413 (3%)

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
           +QA  L +++L      +AH+YN +I G+ + G + +A+++  +M + G+ P  +T N L
Sbjct: 7   DQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTL 66

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           + GLC+ G++S A   F EM     +P   S+N LL G+  +   G A   F E+++  +
Sbjct: 67  LLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMA---GRAIEFFKEMKASGV 123

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P + +Y+ L+  L   G +  A  L   M      PD++TY ++++G CK+G    A+ 
Sbjct: 124 EPDLESYHILLSALSDSGRMAEAHALFSAMTCS---PDIMTYNVLMDGYCKIGQTYEAQS 180

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
              E+L+ G +P+ F Y+  I    KL    EA+ +  +M+     P+ +T+N L+ G C
Sbjct: 181 LMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFC 240

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHA-SLEMGDLRRGRDLFNNMLRKGLSPTL 593
           K G LE+A +L  +M   G     +TY ++I +   + G +    DLFN +   GL+PT+
Sbjct: 241 KAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTI 300

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
           VTY  LI   + R    L  +    M  +G +P+VITYN LI+GLC   R++ A  LF  
Sbjct: 301 VTYNSLIQGFSERANDGLRLL--CHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNG 358

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLL 706
           M      PN  T+  LI   C     +EA    + +LDR   PD  T + ++L
Sbjct: 359 M---ACAPNVTTFNFLIRGLCAQKKVEEA----RNILDRMTAPDMTTFNTIIL 404



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 126/434 (29%), Positives = 217/434 (50%), Gaps = 17/434 (3%)

Query: 177 DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           ++L+  + K   + Q + VF+ M  +GLLP+    N ++  L + G    A +++R M  
Sbjct: 29  NVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQA 88

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
               P+  ++N +L  F   G    A+E   EM+  G  P+  +Y++L++  S +G + +
Sbjct: 89  GPFLPTSASHNILLRGFFMAGR---AIEFFKEMKASGVEPDLESYHILLSALSDSGRMAE 145

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A  L   M          +YN ++ GY + G   EA +L +E++  G  P + TY+I+I 
Sbjct: 146 AHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIIN 202

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
             CK  +V +A   F +M+  N +P+ +++NTL+ G+C++G + +A  LF E+       
Sbjct: 203 CYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKA 262

Query: 417 TVVTYNTLIDGLCRY-GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           T+VTYNTLID LC+  G +  A  L   +   G+ P ++TY  ++ G  +  N  +    
Sbjct: 263 TIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSERANDGL--RL 320

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
              M  +G +PD   Y   I+G        +A RL   M      P++ T+N L+ GLC 
Sbjct: 321 LCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGMAC---APNVTTFNFLIRGLCA 377

Query: 536 LGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVT 595
              +EEA  +L +M      PD  T+ +II A  + G +   R++  +ML+ G  P   T
Sbjct: 378 QKKVEEARNILDRMTA----PDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPNTYT 433

Query: 596 YTVLIHA-HAARGR 608
              L H   +++G+
Sbjct: 434 TYALAHGIQSSKGK 447



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/450 (29%), Positives = 218/450 (48%), Gaps = 16/450 (3%)

Query: 190 EQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTM 249
           +Q L +F ++L     P+    N +I+     G   +A  V+  M   G+ P+  T NT+
Sbjct: 7   DQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTL 66

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           L   C+ G+M  AL+L  EMQ     P   ++N+L+ GF   G   +A    ++M   G+
Sbjct: 67  LLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAG---RAIEFFKEMKASGV 123

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
           +    SY+ ++   S+ G + EA  L   M     +P + TYN+L+ G CK G+  +A+ 
Sbjct: 124 EPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQS 180

Query: 370 RFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLC 429
              E+L+    P++ +Y+ ++  YC+   + EA+ +F ++   N VP  VT+NTLI G C
Sbjct: 181 LMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFC 240

Query: 430 RYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM-GNLSMAREFFNEMLRKGLQPDR 488
           + G LE A +L   M   G    ++TY  +++  CK  G +  A + FN++   GL P  
Sbjct: 241 KAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTI 300

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             Y + I G  +  +  +  RL   M A+G  PD+ITYN L+ GLC    +E+A  L   
Sbjct: 301 VTYNSLIQGFSERAN--DGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNG 358

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M      P+  T+  +I        +   R++ + M     +P + T+  +I A    G 
Sbjct: 359 M---ACAPNVTTFNFLIRGLCAQKKVEEARNILDRM----TAPDMTTFNTIILAFCKAGA 411

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGL 638
           +  A     +M   G  PN  T  AL +G+
Sbjct: 412 MHDAREVMKDMLKHGFYPNTYTTYALAHGI 441



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 131/429 (30%), Positives = 203/429 (47%), Gaps = 22/429 (5%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P+  TYN ++  FCK G+M +A+ +  +M+  G  PN  T N L+ G    G++  A  L
Sbjct: 23  PNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKL 82

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
            R+M       ++ S+N ++ G+   G    A+   +EM   GV P L +Y+IL+  L  
Sbjct: 83  FREMQAGPFLPTSASHNILLRGFFMAG---RAIEFFKEMKASGVEPDLESYHILLSALSD 139

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            GR+++A   F  M      PDI++YN L+ GYC+ G   EA  L  E+      P V T
Sbjct: 140 SGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFT 196

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y+ +I+  C+   +E A ++   MI    +P+ +T+  ++ G CK G L  A + F EM 
Sbjct: 197 YSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEME 256

Query: 481 RKGLQPDRFAYTTQIAGELKL-GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
           + G +     Y T I    K  G    A  L  ++   G  P ++TYN L+ G       
Sbjct: 257 KIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFS----- 311

Query: 540 EEANELLR---KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           E AN+ LR    M  +G  PD ITY  +I        +   + LFN M     +P + T+
Sbjct: 312 ERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGM---ACAPNVTTF 368

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
             LI    A+ ++E A      M      P++ T+N +I   C+   +  A  +  DM +
Sbjct: 369 NFLIRGLCAQKKVEEARNILDRMTA----PDMTTFNTIILAFCKAGAMHDAREVMKDMLK 424

Query: 657 EGILPNKYT 665
            G  PN YT
Sbjct: 425 HGFYPNTYT 433



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 68/146 (46%), Gaps = 3/146 (2%)

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
           LF  +L    +P   TY VLI      G++  A   FS+M+  G+ PN  T N L+ GLC
Sbjct: 12  LFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLC 71

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
            + ++  A  LF +M+    LP   ++ IL+     AG    A+  +KEM    +EPD  
Sbjct: 72  EIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAG---RAIEFFKEMKASGVEPDLE 128

Query: 700 THSALLLKQLDKDYKVHAVEYLESLT 725
           ++  LL    D      A     ++T
Sbjct: 129 SYHILLSALSDSGRMAEAHALFSAMT 154



 Score = 42.0 bits (97), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 34/65 (52%)

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
           R+ DQA  LF ++      PN +TY +LI   C  G   +A+ ++ +M    + P+  T 
Sbjct: 4   RKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTM 63

Query: 702 SALLL 706
           + LLL
Sbjct: 64  NTLLL 68


>gi|357161570|ref|XP_003579133.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Brachypodium distachyon]
          Length = 721

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 167/636 (26%), Positives = 289/636 (45%), Gaps = 50/636 (7%)

Query: 82  HFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLR 141
           H   V+S P++   +  + +   R A  FFRW + Q   +    VF  +L +L  + L  
Sbjct: 84  HLLRVLSPPQVRAVLRAQAQGDARAAFEFFRWADRQWQYRHAPEVFDEMLGLLSRTRLHD 143

Query: 142 SAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLR 201
            A  VV             ++I  G+      +    L+L Y++   +   + V   M  
Sbjct: 144 PARRVVR------------LMIRRGVRR--GPRQFAHLMLSYSRAGKLRSAMRVLQLMQT 189

Query: 202 NGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQE 261
           +G  PD+  CN  + VL   G   KA      M   G++P +VTYN ++   C    + E
Sbjct: 190 DGCAPDISICNVAVNVLVVAGRVDKALGFADRMRRVGVEPDVVTYNCLIKGLCSVRRVVE 249

Query: 262 ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC 321
           ALE++  M   GC P+ ++Y  +++   +   + + R L+  M                 
Sbjct: 250 ALEMIGVMLKNGCPPDKISYYTVMSFLCKEKRVSEVRSLLATM----------------- 292

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
             ++ GLL + +                TYN+LI+ L K G   +A     E   K    
Sbjct: 293 -RNDAGLLTDQV----------------TYNMLIHVLAKHGHADEALEFLRESEGKRFRV 335

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           D + Y+ +++ +C +G + EA  +  E+ S+   P VVTY+ ++DG CR G+++ A+++ 
Sbjct: 336 DEVGYSAVVHSFCLNGRMAEAKEIVGEMISKECHPDVVTYSAVVDGFCRIGEIDQARKMM 395

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
           ++M   G  P+++T+T ++NG CK+G  S A E  N+       P    Y+  + G  + 
Sbjct: 396 KHMYKNGCKPNIVTHTALLNGLCKVGKSSEAWELLNKSGEDWWTPSDITYSVVMHGFRRE 455

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
           G   E+  +  +ML KGF P  +  N+L+H LCK G   EA E + +    G   + + +
Sbjct: 456 GKLKESCDVVAQMLQKGFFPTTVEINLLIHALCKEGKPAEAKEFMEQCQSKGCTINVVNF 515

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
           T++IH     GDL     L +++      P +VTYTV+++A   +GRL+ A     +M  
Sbjct: 516 TTVIHGFSRQGDLESALSLLDDLYLSNRHPDVVTYTVVVNALGRKGRLKEATGLVEKMLN 575

Query: 622 KGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQE 681
           +G+ P ++TY  +I+  C    +++   L   M     L  K  Y  +I + C  G   E
Sbjct: 576 RGLVPTLVTYRTVIHRYCEKGTVEELVDLLDKMLARQEL--KSVYNQVIEKLCAFGKLNE 633

Query: 682 ALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHA 717
           A  L  ++L    + D  T   L+   L++   + A
Sbjct: 634 AYGLLSKVLRTASQRDAQTCHILMESFLNRGLTIQA 669



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 139/499 (27%), Positives = 234/499 (46%), Gaps = 36/499 (7%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           AR V R+M   G++     +  ++ S+ + G+++ A+ +L  MQ  GC+P+    NV + 
Sbjct: 145 ARRVVRLMIRRGVRRGPRQFAHLMLSYSRAGKLRSAMRVLQLMQTDGCAPDISICNVAVN 204

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
                G +++A G    M ++G                                   V P
Sbjct: 205 VLVVAGRVDKALGFADRMRRVG-----------------------------------VEP 229

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
            + TYN LI GLC   RV +A      ML+    PD ISY T++   C+   + E   L 
Sbjct: 230 DVVTYNCLIKGLCSVRRVVEALEMIGVMLKNGCPPDKISYYTVMSFLCKEKRVSEVRSLL 289

Query: 407 DELRS-RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCK 465
             +R+   L+   VTYN LI  L ++G  + A +       +    D + Y+ +V+  C 
Sbjct: 290 ATMRNDAGLLTDQVTYNMLIHVLAKHGHADEALEFLRESEGKRFRVDEVGYSAVVHSFCL 349

Query: 466 MGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT 525
            G ++ A+E   EM+ K   PD   Y+  + G  ++G+  +A ++ + M   G  P+++T
Sbjct: 350 NGRMAEAKEIVGEMISKECHPDVVTYSAVVDGFCRIGEIDQARKMMKHMYKNGCKPNIVT 409

Query: 526 YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML 585
           +  L++GLCK+G   EA ELL K   D + P  ITY+ ++H     G L+   D+   ML
Sbjct: 410 HTALLNGLCKVGKSSEAWELLNKSGEDWWTPSDITYSVVMHGFRREGKLKESCDVVAQML 469

Query: 586 RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
           +KG  PT V   +LIHA    G+   A  +  + Q KG   NV+ +  +I+G  R   ++
Sbjct: 470 QKGFFPTTVEINLLIHALCKEGKPAEAKEFMEQCQSKGCTINVVNFTTVIHGFSRQGDLE 529

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            A  L  D+      P+  TYT+++N     G  +EA  L ++ML+R + P   T+  ++
Sbjct: 530 SALSLLDDLYLSNRHPDVVTYTVVVNALGRKGRLKEATGLVEKMLNRGLVPTLVTYRTVI 589

Query: 706 LKQLDKDYKVHAVEYLESL 724
            +  +K      V+ L+ +
Sbjct: 590 HRYCEKGTVEELVDLLDKM 608



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 197/396 (49%), Gaps = 4/396 (1%)

Query: 200 LRN--GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG 257
           +RN  GLL D    N +I VL  +G + +A E  R       +   V Y+ ++ SFC  G
Sbjct: 292 MRNDAGLLTDQVTYNMLIHVLAKHGHADEALEFLRESEGKRFRVDEVGYSAVVHSFCLNG 351

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
            M EA E++ EM  + C P+ VTY+ ++ GF R GE++QAR +++ M K G K +  ++ 
Sbjct: 352 RMAEAKEIVGEMISKECHPDVVTYSAVVDGFCRIGEIDQARKMMKHMYKNGCKPNIVTHT 411

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            ++ G  + G   EA  L  +       P+  TY+++++G  + G++ ++     +ML+K
Sbjct: 412 ALLNGLCKVGKSSEAWELLNKSGEDWWTPSDITYSVVMHGFRREGKLKESCDVVAQMLQK 471

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
              P  +  N L++  C+ G   EA    ++ +S+     VV + T+I G  R GDLE A
Sbjct: 472 GFFPTTVEINLLIHALCKEGKPAEAKEFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESA 531

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
             L +++      PDV+TYT++VN   + G L  A     +ML +GL P    Y T I  
Sbjct: 532 LSLLDDLYLSNRHPDVVTYTVVVNALGRKGRLKEATGLVEKMLNRGLVPTLVTYRTVIHR 591

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
             + G   E   L ++MLA+     +  YN ++  LC  G L EA  LL K++      D
Sbjct: 592 YCEKGTVEELVDLLDKMLARQELKSV--YNQVIEKLCAFGKLNEAYGLLSKVLRTASQRD 649

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
             T   ++ + L  G   +  ++   M ++ L P L
Sbjct: 650 AQTCHILMESFLNRGLTIQAYNVACRMFQRNLIPDL 685



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 132/268 (49%), Gaps = 2/268 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + ++  +++   V  +ML+ G  P     N +I  L   G   +A+E        G   +
Sbjct: 452 FRREGKLKESCDVVAQMLQKGFFPTTVEINLLIHALCKEGKPAEAKEFMEQCQSKGCTIN 511

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +V + T++  F ++G+++ AL LL ++      P+ VTY V++    R G L++A GL+ 
Sbjct: 512 VVNFTTVIHGFSRQGDLESALSLLDDLYLSNRHPDVVTYTVVVNALGRKGRLKEATGLVE 571

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            ML  GL  +  +Y  +I  Y EKG + E ++L ++M+ R    ++  YN +I  LC +G
Sbjct: 572 KMLNRGLVPTLVTYRTVIHRYCEKGTVEELVDLLDKMLARQELKSV--YNQVIEKLCAFG 629

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           ++++A     ++LR     D  + + L+  +   G   +A+ +   +  RNL+P +    
Sbjct: 630 KLNEAYGLLSKVLRTASQRDAQTCHILMESFLNRGLTIQAYNVACRMFQRNLIPDLKLCQ 689

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGIL 450
            + D L      + A +L    + +G+L
Sbjct: 690 KVDDRLVLEERKQAAGKLIVKFVERGLL 717


>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 591

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 135/483 (27%), Positives = 243/483 (50%), Gaps = 1/483 (0%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           ++    +F +M+R   LP V + ++++K +           ++R + +  I       + 
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++S C          +L     +G   N VT+  LI G     +++ A  L + +++  
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN 172

Query: 309 L-KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDA 367
           + + +   Y  ++ G  +KG   +A +L   M      P   TY I+I   CK G +  A
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGA 232

Query: 368 RHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDG 427
                EM +K++ PDI +Y+TL+   C+         LF E+   N+ P V T+N++IDG
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDG 292

Query: 428 LCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD 487
           LC+ G +E A+++   MI +G+ PDVITY ++++G    G +  ARE F+ M+ K ++PD
Sbjct: 293 LCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPD 352

Query: 488 RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
             +Y   I G  +     EA ++  E+  KG  P ++T NVL+HGL +LG  + A     
Sbjct: 353 IISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFD 412

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
           +M+  G IPD  T+ +++    + G +      F+ + R+     +  YT +I      G
Sbjct: 413 EMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNG 472

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
           +L+ A   F ++ + G+ P+VITY A+I+G C+   +D+A  +   ME+ G L +  TY 
Sbjct: 473 KLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYN 532

Query: 668 ILI 670
           +++
Sbjct: 533 VIV 535



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 199/397 (50%)

Query: 240 KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
           +P+ V Y T+++  CK+G  Q+A +LL  M+     PN  TY ++I  F ++G L+ A  
Sbjct: 175 EPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATS 234

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
           L+ +M +  +     +Y+ +I    +         L  EM+   + P + T+N +I GLC
Sbjct: 235 LLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLC 294

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
           K G+V DA      M+ K V PD+I+YN ++ GY   G +  A  +FD + ++++ P ++
Sbjct: 295 KEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDII 354

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
           +YN LI+G  R   ++ A Q+   +  +G+ P ++T  ++++G  ++G    A+ FF+EM
Sbjct: 355 SYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEM 414

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
           L  G  PD + + T + G  K G   EA     ++  +    ++  Y  ++ GLCK G L
Sbjct: 415 LSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKL 474

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVL 599
           ++A+    K+   G  PD ITYT++I    + G L   +D+   M   G      TY V+
Sbjct: 475 DKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVI 534

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
           +       ++     +  E+  K       T   L++
Sbjct: 535 VRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMD 571



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 123/439 (28%), Positives = 221/439 (50%), Gaps = 22/439 (5%)

Query: 114 VETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCV-- 171
           +  + G+  +E  F T++  L     ++ A  + + +V  N+    +V+ G  ++     
Sbjct: 132 IHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKK 191

Query: 172 --SIKILDLLLLI------------------YTKKSMVEQCLLVFNKMLRNGLLPDVKNC 211
             + K  DLL L+                  + K  M++    + N+M +  + PD+   
Sbjct: 192 GHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTY 251

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
           + +I  L         R ++  M    I P++ T+N+++D  CKEG++++A E++  M  
Sbjct: 252 STLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIE 311

Query: 272 RGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVE 331
           +G  P+ +TYN++I G+   G++++AR +   M+   ++    SYN +I GY+ +  + E
Sbjct: 312 KGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDE 371

Query: 332 ALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLY 391
           A+ +  E+  +G+ P++ T N+L++GL + GR   A++ F EML    IPD+ ++ TLL 
Sbjct: 372 AMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLG 431

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
           GY ++G + EA   F +L  R     +  Y  +IDGLC+ G L+ A    E +   G+ P
Sbjct: 432 GYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHP 491

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           DVITYT M++G C+ G L  A++   +M   G   D   Y   + G L+    SE     
Sbjct: 492 DVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFL 551

Query: 512 EEMLAKGFPPDLITYNVLV 530
           EE+  K F  +  T  +L+
Sbjct: 552 EEIAGKSFSFEAATVELLM 570



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 137/277 (49%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K+  VE    +   M+  G+ PDV   N II      G   +ARE++  M    I+P I+
Sbjct: 295 KEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDII 354

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           +YN +++ + ++ ++ EA+++  E+  +G  P+ VT NVL+ G    G  + A+    +M
Sbjct: 355 SYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEM 414

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           L  G     +++  ++ GY + GL+ EA++   ++  R     +  Y  +I GLCK G++
Sbjct: 415 LSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKL 474

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
             A   F ++    + PD+I+Y  ++ GYC+ G + EA  +  ++     +    TYN +
Sbjct: 475 DKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVI 534

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           + G  R   +   +   E +  +    +  T  ++++
Sbjct: 535 VRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMD 571


>gi|77557056|gb|ABA99852.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 726

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 166/651 (25%), Positives = 285/651 (43%), Gaps = 85/651 (13%)

Query: 82  HFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLR 141
           H   V+S P++   +  + R   R A  FFRW + Q   +    VF  +L +L  + L  
Sbjct: 85  HLLRVLSPPQVRAVLRAQARGDVRRAFEFFRWADRQWRYRHAPEVFDEMLSLLSNTRLHD 144

Query: 142 SAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLR 201
            A  VV             ++I  G+      +    L+L Y++   +   + V + M +
Sbjct: 145 PARRVVR------------LMIRRGVRR--GTEQFAQLMLSYSRAGKLRSAMRVLHLMQK 190

Query: 202 NGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQE 261
           +G  PD+  CN  + VL   G   KA E    M   G++P + TYN ++   C    + +
Sbjct: 191 DGCAPDISICNMAVNVLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVD 250

Query: 262 ALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIIC 321
           A+E++  M   GC P+ ++Y  +++   +   +E+ RGL++ M                 
Sbjct: 251 AMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRM----------------- 293

Query: 322 GYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIP 381
             ++ GL                 P   TYN+LI+GL K G   +A     E   K    
Sbjct: 294 -RNDAGLF----------------PDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRV 336

Query: 382 DIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           D + Y+ +++ +C +G + EA  +  E+ S+   P VVTY+T++DG CR G+L+ A+++ 
Sbjct: 337 DEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMM 396

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
           ++M      P+ +T+T ++NG CK+G  S A E  N+   +   P    Y+  + G  + 
Sbjct: 397 KHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRRE 456

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
           G   E+  +  +ML KGF P  +  N+L+H LCK     EA + + +    G   + + +
Sbjct: 457 GKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNF 516

Query: 562 TSIIHASLEMGDL------------------------------RRGR-----DLFNNMLR 586
           T++IH     GDL                              ++GR      L   ML 
Sbjct: 517 TTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLN 576

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQ 646
           +G+ PT VTY  +IH +  +G LE       +M  +    +   YN ++  LC   ++++
Sbjct: 577 RGVLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLARQEMKS--AYNQVVEKLCAFGKLNE 634

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           AY L   +     + +  T  IL+    N G   +A  +   M  R + PD
Sbjct: 635 AYSLLYKILRTASVRDAQTCHILMESFLNRGLGLQAYNVACRMFRRNLIPD 685



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 161/338 (47%), Gaps = 37/338 (10%)

Query: 221 NGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVT 280
           NG   +A+E+   M   G +P +VTY+T++D FC+ GE+ +A +++  M    C PN VT
Sbjct: 351 NGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVT 410

Query: 281 YNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMV 340
           +  L+ G  + G+  +A  L+    +     S  +Y+ ++ G+  +G L E+ ++  +M+
Sbjct: 411 HTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQML 470

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
            +G  PT    N+LI+ LCK  + ++A+    +   K    +++++ T+++G+ R G++ 
Sbjct: 471 QKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLE 530

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM- 459
            A  L D++   N  P VVTY  ++D L + G L+ A  L E M+N+G+LP  +TY  + 
Sbjct: 531 SALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTPVTYRTVI 590

Query: 460 --------------------------------VNGSCKMGNLSMAREFFNEMLRKGLQPD 487
                                           V   C  G L+ A     ++LR     D
Sbjct: 591 HRYCEKGNLEDLLNLLEKMLARQEMKSAYNQVVEKLCAFGKLNEAYSLLYKILRTASVRD 650

Query: 488 RFAYTTQIAGE--LKLGDTSEAYRLQEEMLAKGFPPDL 523
             A T  I  E  L  G   +AY +   M  +   PD+
Sbjct: 651 --AQTCHILMESFLNRGLGLQAYNVACRMFRRNLIPDV 686



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 120/273 (43%), Gaps = 33/273 (12%)

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
           ++   R  G   ++ +V   M + G  P+ V  N ++ + CK+ +  EA + + + Q +G
Sbjct: 449 VMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKG 508

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
           C+ N V +  +I GFSR G+LE A  L+ DM          +Y  ++    +KG L EA 
Sbjct: 509 CTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEAT 568

Query: 334 NLEEEMVTRGVAPTLATYNILIY---------------------------------GLCK 360
            L E+M+ RGV PT  TY  +I+                                  LC 
Sbjct: 569 GLVEKMLNRGVLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLARQEMKSAYNQVVEKLCA 628

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
           +G++++A    +++LR   + D  + + L+  +   G   +A+ +   +  RNL+P V  
Sbjct: 629 FGKLNEAYSLLYKILRTASVRDAQTCHILMESFLNRGLGLQAYNVACRMFRRNLIPDVKL 688

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
              + + L    +  V  +L      +G+L  V
Sbjct: 689 CQKVDNQLASEKNKPVPGKLMVKFAERGLLKQV 721



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 57/129 (44%)

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
            R +   M+R+G+      +  L+ +++  G+L  A      MQ  G  P++   N  +N
Sbjct: 146 ARRVVRLMIRRGVRRGTEQFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVN 205

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
            L    R+D+A      M   G+ P+ YTY  LI   C A    +A+ +   ML     P
Sbjct: 206 VLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPP 265

Query: 697 DYCTHSALL 705
           D  ++  ++
Sbjct: 266 DKISYYTVM 274


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 123/402 (30%), Positives = 208/402 (51%), Gaps = 37/402 (9%)

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
           ++G  P L TYN++I  LCK G++  A   F EM  KN  PD+ +Y+TL+ G C+   + 
Sbjct: 191 SKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVD 250

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           EA  L DE+++   +P  VT+N LID L + GDL  A +L +NM  +G +P+ +TY  ++
Sbjct: 251 EAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLI 310

Query: 461 NGSCKMGNLSMAREFFNEML-----------------------------------RKGLQ 485
           +G C  G L  A     +M+                                    +G +
Sbjct: 311 HGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQK 370

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
            + + Y++ I+G  K G +  A RL +EM  KG  P+++ Y   + GLC+    +EA ++
Sbjct: 371 ANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDI 430

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
           L++M+  GF+P+  TY+S++    + GD ++   ++  M+ + +   +V  +VL++    
Sbjct: 431 LQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCE 490

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM--EEEGILPNK 663
            GRL  A   ++ M  +G++P+V+ Y+++I GLC +  +D+   LF +M  +E    P+ 
Sbjct: 491 SGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDV 550

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            TY IL N  C   N   A+ L   MLD   +PD  T +  L
Sbjct: 551 VTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFL 592



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 143/468 (30%), Positives = 230/468 (49%), Gaps = 23/468 (4%)

Query: 203 GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           G  P++   N IIK L   G   +A + +R M      P + TY+T+++  CKE  + EA
Sbjct: 193 GFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEA 252

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
           + LL EMQ  GC PN VT+NVLI   S+NG+L +A  L+ +M   G   +  +YN +I G
Sbjct: 253 VFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHG 312

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
              KG L +AL+L E+MV+    P   TY  +I GL K  R  D  H    M  +    +
Sbjct: 313 LCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKAN 372

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
              Y++L+ G  + G    A  L+ E+  +   P VV Y   IDGLCR    + A+ + +
Sbjct: 373 EYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQ 432

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            M+++G LP+  TY+ ++ G  K G+   A   + EM+ + ++ +    +  + G  + G
Sbjct: 433 EMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESG 492

Query: 503 DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD--GFIPDHIT 560
              EA  +   ML +G  PD++ Y+ ++ GLC +GS+++  +L  +M        PD +T
Sbjct: 493 RLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVT 552

Query: 561 YTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAAR------GRLEL--- 611
           Y  + +A     +L R  DL N+ML +G  P  +T  + +     R      GRL L   
Sbjct: 553 YNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDEL 612

Query: 612 ------------AFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA 647
                       A     EM ++ + P   T++ +I   C+ +RI + 
Sbjct: 613 VVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRET 660



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 192/426 (45%), Gaps = 59/426 (13%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K+  V++ + + ++M   G LP+    N +I  L  NG   +A ++   M   G  P+ V
Sbjct: 245 KERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEV 304

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TYNT++   C +G++ +AL LL +M    C PN VTY  +I G  +    E    ++  M
Sbjct: 305 TYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSM 364

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
            + G K + + Y+ +I G  ++G    A+ L +EM  +G  P +  Y   I GLC+  + 
Sbjct: 365 EERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKP 424

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN----------- 413
            +A     EML K  +P+  +Y++L+ G+ + G+  +A L++ E+ S++           
Sbjct: 425 DEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVL 484

Query: 414 ------------------------LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ-- 447
                                   L P VV Y+++I GLC  G ++   +L   M  Q  
Sbjct: 485 LNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEP 544

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPD-------------------- 487
              PDV+TY I+ N  C+  NL+ A +  N ML +G  PD                    
Sbjct: 545 KSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQD 604

Query: 488 -RFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA-NEL 545
            R      +   LK      A R+ EEML +  PP+  T++ ++   CK   + E  +E 
Sbjct: 605 GRLFLDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRETIDEC 664

Query: 546 LRKMVG 551
            R + G
Sbjct: 665 CRSLYG 670


>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Brachypodium distachyon]
          Length = 554

 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 135/420 (32%), Positives = 217/420 (51%), Gaps = 23/420 (5%)

Query: 203 GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG----------------EFGIKPSIVTY 246
           GLLPD   C+ ++  LR  G S+ A     +M                 + G+ P    +
Sbjct: 133 GLLPDA--CSLVLLALR-RGISLPAPVCSGLMSRLPSTPEAYTFYLQLLDAGMAPETRLF 189

Query: 247 NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
           N ++  F + GE+  A ++  EM+ R   P  VT+N LI+G  R  +L+   GL ++M  
Sbjct: 190 NVLMRDFVRLGELVSARKVFDEMR-RSVQPTVVTFNTLISGMCRARDLDAVDGLYKEMSD 248

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
           +G+K   ++Y  +I G+   G +  A+ +  EM   GV P    +  LI   CK G V+ 
Sbjct: 249 VGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNA 308

Query: 367 ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
               + +M  + V+PD+++YN L+ G CR+ N+  A  + +E+++  L P  VTY TLID
Sbjct: 309 GMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLID 368

Query: 427 GLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
           G C+ G L++A  +K+ M  + +  D +TYT +++G  K G    A     EM+   L+P
Sbjct: 369 GCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEP 428

Query: 487 DRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
           D   YT  I    + GD    ++L +EM  KG  P ++TYNV+++GLCKLG ++ A+ LL
Sbjct: 429 DNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLL 488

Query: 547 RKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAAR 606
             M+  G  PD ITY  ++    + G +    +L ++   KG+ P    YT LI   A +
Sbjct: 489 HAMLNIGVSPDDITYNILLDGQCKHGKVANSEELESS---KGMVPDFAVYTSLISELAKK 545



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 135/422 (31%), Positives = 216/422 (51%), Gaps = 9/422 (2%)

Query: 252 SFCKEGEMQEALELLWEMQGRGCS-PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLK 310
           ++  EG + +A  L+     RG S P  V   ++    SR     +A      +L  G+ 
Sbjct: 128 AYADEGLLPDACSLVLLALRRGISLPAPVCSGLM----SRLPSTPEAYTFYLQLLDAGMA 183

Query: 311 VSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
                +N ++  +   G LV A  + +EM  R V PT+ T+N LI G+C+   +      
Sbjct: 184 PETRLFNVLMRDFVRLGELVSARKVFDEM-RRSVQPTVVTFNTLISGMCRARDLDAVDGL 242

Query: 371 FFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCR 430
           + EM    V PD+ +Y  L+ G+CR+G +  A  +F+E+R   + P  V + TLID  C+
Sbjct: 243 YKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCK 302

Query: 431 YGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFA 490
            G++     L ++M  +G++PD++ Y  +VNG C+  NL  A     EM   GL+PD+  
Sbjct: 303 EGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVT 362

Query: 491 YTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMV 550
           YTT I G  K G    A  ++++M  K    D +TY  L+ GL K G   +A  +LR+M+
Sbjct: 363 YTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMM 422

Query: 551 GDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
                PD+ TYT +I A    GD++ G  L   M  KG  P +VTY V+++     G+++
Sbjct: 423 EAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMK 482

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
            A M    M   G+ P+ ITYN L++G C+  ++  +  L      +G++P+   YT LI
Sbjct: 483 NADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEEL---ESSKGMVPDFAVYTSLI 539

Query: 671 NE 672
           +E
Sbjct: 540 SE 541



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 129/425 (30%), Positives = 214/425 (50%), Gaps = 13/425 (3%)

Query: 284 LITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG-YSEKGLLVEALNLEEEMVTR 342
           L   ++  G L  A  L+   L+ G+ + A    P+  G  S      EA     +++  
Sbjct: 125 LAAAYADEGLLPDACSLVLLALRRGISLPA----PVCSGLMSRLPSTPEAYTFYLQLLDA 180

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           G+AP    +N+L+    + G +  AR  F EM R++V P ++++NTL+ G CR+ ++   
Sbjct: 181 GMAPETRLFNVLMRDFVRLGELVSARKVFDEM-RRSVQPTVVTFNTLISGMCRARDLDAV 239

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
             L+ E+    + P V TY  LI G CR G +E A ++   M + G+ P+ + +T +++ 
Sbjct: 240 DGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDA 299

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            CK GN++   + + +M  +G+ PD  AY   + G  +  +   A  + EEM   G  PD
Sbjct: 300 HCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPD 359

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
            +TY  L+ G CK G L+ A ++ +KM       D +TYT++I    + G       +  
Sbjct: 360 KVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLR 419

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
            M+   L P   TYT++I A   +G ++  F    EMQ KG +P V+TYN ++NGLC+L 
Sbjct: 420 EMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLG 479

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNW--QEALRLYKEMLDREIEPDYCT 700
           ++  A  L   M   G+ P+  TY IL++  C  G     E L   K M+     PD+  
Sbjct: 480 QMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEELESSKGMV-----PDFAV 534

Query: 701 HSALL 705
           +++L+
Sbjct: 535 YTSLI 539



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 166/302 (54%), Gaps = 3/302 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           ++ +M   G+ PDV     +IK     G    A +++  M + G+ P+ V + T++D+ C
Sbjct: 242 LYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHC 301

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           KEG +   ++L  +M+ RG  P+ V YN L+ G  R   L+ A  ++ +M   GLK    
Sbjct: 302 KEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKV 361

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +Y  +I G  + G L  A++++++M  + V+    TY  LI GL K GR  DA     EM
Sbjct: 362 TYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREM 421

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           +   + PD  +Y  ++  +CR G++   F L  E++++   P VVTYN +++GLC+ G +
Sbjct: 422 MEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQM 481

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           + A  L   M+N G+ PD ITY I+++G CK G ++ + E  +    KG+ PD   YT+ 
Sbjct: 482 KNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEELESS---KGMVPDFAVYTSL 538

Query: 495 IA 496
           I+
Sbjct: 539 IS 540


>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 141/480 (29%), Positives = 231/480 (48%), Gaps = 36/480 (7%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + +  + EQ L  FN+M+  GL+P     N ++ +L  + F  KA  V+    +  +K  
Sbjct: 105 HVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNET-KGNVKLD 163

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           + ++  M+   C+ G + +  E+L +M+  G SPN V Y  LI G  +NG++E+ + L  
Sbjct: 164 VYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFY 223

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M +L   V A+ Y                                 TY +LI G  K G
Sbjct: 224 KMGEL--DVVANQY---------------------------------TYTVLINGFFKMG 248

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
              D    + +M    ++P++ +YN+++   C  G +  AF LFDE+R R +   VVTYN
Sbjct: 249 LKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYN 308

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           TLI GLC+   +  A++L   M   G+ P++I+Y  +++G C +GNL  A   FN+M   
Sbjct: 309 TLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSS 368

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           G  P    Y   IAG  +  +++    +  EM A+G  P  +TY +L+  L +  ++E+A
Sbjct: 369 GQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKA 428

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            ++   M   G + D   Y  +IH    +GD++    LF ++    L P  V Y  +I+ 
Sbjct: 429 FQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYG 488

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
           +   G    A     EM   G+ PNV +YN+ I  LC+  +  +A  L  DM E G+ P+
Sbjct: 489 YCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPS 548



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 136/424 (32%), Positives = 217/424 (51%), Gaps = 1/424 (0%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           LL++  K +  E+   VFN+   N  L DV +   +IK   + G+  K  EV   M E G
Sbjct: 136 LLILLIKSNFFEKAWRVFNETKGNVKL-DVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMG 194

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           + P++V Y T++D  CK G+++   +L ++M       N  TY VLI GF + G  +   
Sbjct: 195 LSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGI 254

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L   M   G+  + ++YN +IC     G L  A  L +EM  RGVA  + TYN LI GL
Sbjct: 255 ELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGL 314

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           C+  RV +A      M R  + P++ISYNTL+ GYC  GN+ +A  LF++++S    P++
Sbjct: 315 CQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSL 374

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
            TYN LI G     +      +   M  +G+ P  +TYTI+++   +  N+  A + ++ 
Sbjct: 375 ATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSS 434

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M + GL  D + Y   I G   +GD  EA +L + +      P+ + YN +++G CK GS
Sbjct: 435 MEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGS 494

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTV 598
              A  LL++M  +G +P+  +Y S I    +         L  +M+  GL P++  + +
Sbjct: 495 SYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPSISIWNM 554

Query: 599 LIHA 602
           +  A
Sbjct: 555 ISKA 558



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/390 (30%), Positives = 204/390 (52%), Gaps = 1/390 (0%)

Query: 316 YNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEML 375
           +  II  +    L  +AL    +M+ RG+ P   T+N L+  L K      A  R F   
Sbjct: 98  HEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKA-WRVFNET 156

Query: 376 RKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLE 435
           + NV  D+ S+  ++ G C  G + + F +  ++    L P VV Y TLIDG C+ GD+E
Sbjct: 157 KGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIE 216

Query: 436 VAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQI 495
             +QL   M    ++ +  TYT+++NG  KMG      E + +M   G+ P+ + Y + I
Sbjct: 217 RGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMI 276

Query: 496 AGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFI 555
                 G  + A+ L +EM  +G   +++TYN L+ GLC+   + EA  L+ +M  DG  
Sbjct: 277 CRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLS 336

Query: 556 PDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMY 615
           P+ I+Y ++I     +G+L +   LFN M   G SP+L TY +LI   +           
Sbjct: 337 PNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDM 396

Query: 616 FSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCN 675
             EM+ +G+ P+ +TY  L++ L R   I++A+ ++  ME+ G++ + Y Y +LI+  C 
Sbjct: 397 VREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCV 456

Query: 676 AGNWQEALRLYKEMLDREIEPDYCTHSALL 705
            G+ +EA +L+K + +  ++P+   ++ ++
Sbjct: 457 VGDMKEASKLFKSLDEMHLKPNDVIYNTMI 486



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 122/455 (26%), Positives = 227/455 (49%), Gaps = 1/455 (0%)

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           ++ +  ++++  +    ++AL    +M GRG  P   T+N L+    ++   E+A  +  
Sbjct: 95  VLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFN 154

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +  K  +K+  +S+  +I G  E G L +   +  +M   G++P +  Y  LI G CK G
Sbjct: 155 ET-KGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNG 213

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            +   +  F++M   +V+ +  +Y  L+ G+ + G   +   L+++++   +VP V TYN
Sbjct: 214 DIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYN 273

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           ++I   C  G L  A +L + M  +G+  +V+TY  ++ G C+   +  A      M R 
Sbjct: 274 SMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRD 333

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           GL P+  +Y T I G   +G+  +A  L  +M + G  P L TYN+L+ G  +  +    
Sbjct: 334 GLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGV 393

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            +++R+M   G  P  +TYT ++ A +   ++ +   ++++M + GL   +  Y VLIH 
Sbjct: 394 TDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHG 453

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
               G ++ A   F  +    ++PN + YN +I G C+     +A  L  +M E G++PN
Sbjct: 454 LCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPN 513

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
             +Y   I   C    W EA  L K+M++  ++P 
Sbjct: 514 VASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPS 548



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 96/189 (50%), Gaps = 1/189 (0%)

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
           FP  ++ +  +++   +    E+A     +M+G G +P   T+ +++   ++     +  
Sbjct: 91  FPTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAW 150

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
            +FN   +  +   + ++ ++I      G L+  F    +M+  G+ PNV+ Y  LI+G 
Sbjct: 151 RVFNET-KGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGC 209

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
           C+   I++   LF  M E  ++ N+YTYT+LIN     G  ++ + LY++M    I P+ 
Sbjct: 210 CKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNV 269

Query: 699 CTHSALLLK 707
            T+++++ +
Sbjct: 270 YTYNSMICR 278



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 84/176 (47%), Gaps = 3/176 (1%)

Query: 552 DGFIPDHI-TYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLE 610
           D F P H+  + +II+A +      +    FN M+ +GL P   T+  L+         E
Sbjct: 89  DSF-PTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFE 147

Query: 611 LAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
            A+  F+E +   ++ +V ++  +I G C +  +D+ + +   MEE G+ PN   YT LI
Sbjct: 148 KAWRVFNETK-GNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLI 206

Query: 671 NENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
           +  C  G+ +   +L+ +M + ++  +  T++ L+        K   +E  E + L
Sbjct: 207 DGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKL 262


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 129/368 (35%), Positives = 208/368 (56%), Gaps = 8/368 (2%)

Query: 210 NC-NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWE 268
           NC +R+ +V  D  FSV  + +     + G +P  VT++++++  C E +   A+E   E
Sbjct: 127 NCFSRLQRV--DFAFSVLGKII-----KLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179

Query: 269 MQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGL 328
           M   G  PN  TYN +I GF + G+   A GL++ M K G +     YN II G  +  L
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRL 239

Query: 329 LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNT 388
           + EAL++  E+  +GV P + TY+IL++GLC   +  +A   F EM+  N++PD++++N 
Sbjct: 240 VSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNI 299

Query: 389 LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
           L+   C+ G + EA  +   +  + + P   TYN+L++G C    +  A+ + + MI +G
Sbjct: 300 LVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKG 359

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
            +P+V++Y I++NG CK   +  ARE F+EM  +GL P+ F Y T I+G  + G   EA 
Sbjct: 360 CMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEAR 419

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
            L ++M A+G  PDL+T  +L+  LCKLG L+ A  L R M      P+ +TY  +I A 
Sbjct: 420 ELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAM 479

Query: 569 LEMGDLRR 576
            + G + R
Sbjct: 480 YKSGKIYR 487



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 127/404 (31%), Positives = 214/404 (52%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P IV ++ +L +  +       L L   ++      +   +N+LI  FSR   ++ A  +
Sbjct: 82  PCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSV 141

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +  ++KLG +  A +++ +I G   +     A+   +EMV  G  P L TYN +I G CK
Sbjct: 142 LGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCK 201

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
            G+ + A     +M +    PDI+ YNT++ G C+   + EA  +F E++ + + P V T
Sbjct: 202 IGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFT 261

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           Y+ L+ GLC     E A  L   M++  I+PDV+T+ I+V+  CK G LS A+     M+
Sbjct: 262 YSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMI 321

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            KG++P+   Y + + G        EA  + + M+ KG  P++++YN+L++G CK   ++
Sbjct: 322 EKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRID 381

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           EA EL  +M   G IP+   Y ++I    + G     R+LF +M  +G SP LVT T+L+
Sbjct: 382 EARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILL 441

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRI 644
            +    G L+ A   F  MQ   ++PN++TY+ LI  + +  +I
Sbjct: 442 DSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKI 485



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 135/421 (32%), Positives = 214/421 (50%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +E  L  FN M+    LP +   ++++  L           + + +    I+  +  +N 
Sbjct: 65  IEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNI 124

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++ F +   +  A  +L ++   G  P+ VT++ LI G     +  +A     +M+  G
Sbjct: 125 LINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASG 184

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            + + H+YN II G+ + G    A+ L ++M   G  P +  YN +I GLCK   VS+A 
Sbjct: 185 YQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEAL 244

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F E+  K V PD+ +Y+ L++G C S    EA  LF+E+ S N++P VVT+N L+D L
Sbjct: 245 DIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKL 304

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G L  AQ + + MI +G+ P+  TY  ++NG C    +  AR  F+ M+ KG  P+ 
Sbjct: 305 CKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNV 364

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
            +Y   I G  K     EA  L +EM  +G  P+   YN L+ GLC+ G   EA EL + 
Sbjct: 365 VSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKD 424

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M   G  PD +T T ++ +  ++G L     LF  M    L P LVTY +LI A    G+
Sbjct: 425 MQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGK 484

Query: 609 L 609
           +
Sbjct: 485 I 485



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 121/366 (33%), Positives = 200/366 (54%), Gaps = 1/366 (0%)

Query: 351 YNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELR 410
           +NILI    +  RV  A     ++++    PD +++++L+ G C       A   FDE+ 
Sbjct: 122 FNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMV 181

Query: 411 SRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLS 470
           +    P + TYNT+I G C+ G   VA  L + M   G  PD++ Y  +++G CK   +S
Sbjct: 182 ASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVS 241

Query: 471 MAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
            A + F+E+  KG++PD F Y+  + G        EA  L  EM++    PD++T+N+LV
Sbjct: 242 EALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILV 301

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLS 590
             LCK G L EA  +++ M+  G  P++ TY S+++       +   R +F+ M+ KG  
Sbjct: 302 DKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCM 361

Query: 591 PTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGL 650
           P +V+Y +LI+ +    R++ A   F EM  +G+ PN   YN LI+GLC+  R  +A  L
Sbjct: 362 PNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEAREL 421

Query: 651 FIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLD 710
           F DM+ +G  P+  T TIL++  C  G    ALRL++ M D  ++P+  T+  +L++ + 
Sbjct: 422 FKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYD-ILIRAMY 480

Query: 711 KDYKVH 716
           K  K++
Sbjct: 481 KSGKIY 486



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/378 (31%), Positives = 195/378 (51%), Gaps = 6/378 (1%)

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCK---WGRVSDARHRFFEMLRKNVIPDIISYN 387
           +AL     M+ +   P +  ++ L+  L +   +G V     R  E+LR  +  D+  +N
Sbjct: 67  DALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRI-ELLR--IERDVFHFN 123

Query: 388 TLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
            L+  + R   +  AF +  ++      P  VT+++LI+GLC       A +  + M+  
Sbjct: 124 ILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVAS 183

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
           G  P++ TY  ++ G CK+G  ++A     +M + G +PD   Y T I G  K    SEA
Sbjct: 184 GYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEA 243

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
             +  E+  KG  PD+ TY++L+HGLC     EEA+ L  +M+    +PD +T+  ++  
Sbjct: 244 LDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDK 303

Query: 568 SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
             + G L   + +   M+ KG+ P   TY  L++ +  + ++  A M F  M  KG  PN
Sbjct: 304 LCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPN 363

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYK 687
           V++YN LING C+ +RID+A  LF +M   G++PN + Y  LI+  C AG   EA  L+K
Sbjct: 364 VVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFK 423

Query: 688 EMLDREIEPDYCTHSALL 705
           +M  +   PD  T + LL
Sbjct: 424 DMQAQGCSPDLVTCTILL 441



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/417 (28%), Positives = 202/417 (48%)

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           C    +++AL     M  +   P  V ++ L++   R         L + +  L ++   
Sbjct: 60  CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
             +N +I  +S    +  A ++  +++  G  P   T++ LI GLC   + + A   F E
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M+     P++ +YNT++ G+C+ G    A  L  ++      P +V YNT+IDGLC+   
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRL 239

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           +  A  +   +  +G+ PDV TY+I+++G C       A   FNEM+   + PD   +  
Sbjct: 240 VSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNI 299

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            +    K G  SEA  + + M+ KG  P+  TYN L++G C    + EA  +   M+  G
Sbjct: 300 LVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKG 359

Query: 554 FIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAF 613
            +P+ ++Y  +I+   +   +   R+LF+ M  +GL P    Y  LI      GR   A 
Sbjct: 360 CMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEAR 419

Query: 614 MYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
             F +MQ +G  P+++T   L++ LC+L  +D A  LF  M++  + PN  TY ILI
Sbjct: 420 ELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILI 476



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 125/244 (51%)

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
           C + N+  A   FN M+ K   P    +   ++  +++        L + +       D+
Sbjct: 60  CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119

Query: 524 ITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNN 583
             +N+L++   +L  ++ A  +L K++  GF PD +T++S+I+         R  + F+ 
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179

Query: 584 MLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRR 643
           M+  G  P L TY  +I      G+  +A     +M   G RP+++ YN +I+GLC+ R 
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRL 239

Query: 644 IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSA 703
           + +A  +F +++ +G+ P+ +TY+IL++  CN+   +EA  L+ EM+   I PD  T + 
Sbjct: 240 VSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNI 299

Query: 704 LLLK 707
           L+ K
Sbjct: 300 LVDK 303


>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 140/433 (32%), Positives = 213/433 (49%), Gaps = 3/433 (0%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR--NGELEQAR 298
           PS V +N +L S  K       L L  +M   G  PN  T ++LI  F     G++ +A 
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEAL 118

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L   M+  G +    +Y  +I G  + G    A+ L   MV +   P +  YN +I  L
Sbjct: 119 HLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSL 178

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           CK  +V++A + F EM+ K + PDI +YN+L++  C          L +E+    ++P V
Sbjct: 179 CKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDV 238

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQG-ILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           V++NT++D LC+ G +  A  + + MI +G  +P+VI+Y  ++NG CK+  +  A   F 
Sbjct: 239 VSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFG 298

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
           EM R+ L PD   Y+T I G   +    +A  L  EM+A    P+L+TY +L+  LCK  
Sbjct: 299 EMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNR 358

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
            L EA  LL+ + G    PD       I      G+L   RDLF+N+  KGL P + TY+
Sbjct: 359 YLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYS 418

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           ++I+    RG L+ A   F EM   G   N   YN +  G  R     +A  L  +M   
Sbjct: 419 IMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVAR 478

Query: 658 GILPNKYTYTILI 670
           G   +  T T+ +
Sbjct: 479 GFSADASTMTLFV 491



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 217/424 (51%), Gaps = 3/424 (0%)

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKW-- 361
           ML++    S   +N ++   ++       L+L  +M + G+ P + T +ILI   C    
Sbjct: 52  MLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNR 111

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           G++ +A H F +M+ +   PD+++Y TL+ G C+ GN   A  L   +  +N  P V  Y
Sbjct: 112 GKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAY 171

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           NT+ID LC+   +  A  L   M+ +GI PD+ TY  +++  C +          NEM+ 
Sbjct: 172 NTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVD 231

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG-FPPDLITYNVLVHGLCKLGSLE 540
             + PD  ++ T +    K G  +EA+ + ++M+ +G   P++I+YN L++G CK+  ++
Sbjct: 232 SKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRID 291

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           +A  L  +M     IPD +TY+++IH    +  L+    LF+ M+     P LVTY +L+
Sbjct: 292 KAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILL 351

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL 660
                   L  A      ++   + P++   N  I+G+CR   ++ A  LF ++  +G+ 
Sbjct: 352 DYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQ 411

Query: 661 PNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEY 720
           P+ +TY+I+IN  C  G   EA +L++EM +     + C ++ +    L  +    A++ 
Sbjct: 412 PDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQL 471

Query: 721 LESL 724
           L+ +
Sbjct: 472 LQEM 475



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 136/443 (30%), Positives = 215/443 (48%), Gaps = 38/443 (8%)

Query: 196 FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC- 254
           FN+MLR    P   + N+++  +           +   M  FGI P+I T + +++SFC 
Sbjct: 49  FNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCH 108

Query: 255 -KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
              G++ EAL L  +M G G  P+ VTY  LI G  + G    A  L+  M++   + + 
Sbjct: 109 LNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNV 168

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY----------------- 356
            +YN II    +   + EA NL  EMVT+G++P + TYN LI+                 
Sbjct: 169 FAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNE 228

Query: 357 ------------------GLCKWGRVSDARHRFFEML-RKNVIPDIISYNTLLYGYCRSG 397
                              LCK G+V++A     +M+ R   +P++ISYNTL+ GYC+  
Sbjct: 229 MVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQ 288

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
            I +A  LF E+  + L+P  VTY+TLI GLC    L+ A  L   M+    +P+++TY 
Sbjct: 289 RIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYR 348

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK 517
           I+++  CK   L+ A      +    L PD       I G  + G+   A  L   + +K
Sbjct: 349 ILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSK 408

Query: 518 GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
           G  PD+ TY+++++GLC+ G L+EA++L R+M  +G   +   Y +I    L   +  R 
Sbjct: 409 GLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRA 468

Query: 578 RDLFNNMLRKGLSPTLVTYTVLI 600
             L   M+ +G S    T T+ +
Sbjct: 469 IQLLQEMVARGFSADASTMTLFV 491



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 198/381 (51%), Gaps = 1/381 (0%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           +  +  + + L +F+KM+  G  PDV     +I  L   G +  A  +   M +   +P+
Sbjct: 108 HLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPN 167

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +  YNT++DS CK+ ++ EA  L  EM  +G SP+  TYN LI       E +    L+ 
Sbjct: 168 VFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLN 227

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG-VAPTLATYNILIYGLCKW 361
           +M+   +     S+N ++    ++G + EA ++ ++M+ RG   P + +YN LI G CK 
Sbjct: 228 EMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKI 287

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
            R+  A + F EM R+ +IPD ++Y+TL++G C    + +A  LF E+ + + +P +VTY
Sbjct: 288 QRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTY 347

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
             L+D LC+   L  A  L + +    + PD+    I ++G C+ G L  AR+ F+ +  
Sbjct: 348 RILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSS 407

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
           KGLQPD + Y+  I G  + G   EA +L  EM   G   +   YN +  G  +      
Sbjct: 408 KGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSR 467

Query: 542 ANELLRKMVGDGFIPDHITYT 562
           A +LL++MV  GF  D  T T
Sbjct: 468 AIQLLQEMVARGFSADASTMT 488



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 111/219 (50%), Gaps = 2/219 (0%)

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
           FN MLR    P    +   +    K+   S    L  +M + G PP++ T ++L++  C 
Sbjct: 49  FNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCH 108

Query: 536 L--GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
           L  G + EA  L  KM+G+GF PD +TY ++I+   ++G+      L  +M++K   P +
Sbjct: 109 LNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNV 168

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFID 653
             Y  +I +     ++  AF  FSEM  KGI P++ TYN+LI+ LC L        L  +
Sbjct: 169 FAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNE 228

Query: 654 MEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
           M +  I+P+  ++  +++  C  G   EA  +  +M+ R
Sbjct: 229 MVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQR 267



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 122/266 (45%), Gaps = 14/266 (5%)

Query: 185 KKSMVEQCLLVFNKML-RNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG----- 238
           K+  V +   V +KM+ R G +P+V + N +I     NG+  K + + + M  FG     
Sbjct: 250 KEGKVTEAHDVVDKMIQRGGCMPNVISYNTLI-----NGY-CKIQRIDKAMYLFGEMCRQ 303

Query: 239 -IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
            + P  VTY+T++   C    +Q+A+ L  EM      PN VTY +L+    +N  L +A
Sbjct: 304 ELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEA 363

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L++ +    L       N  I G    G L  A +L   + ++G+ P + TY+I+I G
Sbjct: 364 MALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMING 423

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           LC+ G + +A   F EM       +   YNT+  G+ R+     A  L  E+ +R     
Sbjct: 424 LCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSAD 483

Query: 418 VVTYNTLIDGLCRYG-DLEVAQQLKE 442
             T    +  L   G D  + Q L++
Sbjct: 484 ASTMTLFVKMLSDDGLDQSLKQILRD 509



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 65/137 (47%), Gaps = 3/137 (2%)

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
           FN MLR    P+ V +  L+ + A             +M   GI PN+ T + LIN  C 
Sbjct: 49  FNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCH 108

Query: 641 LRR--IDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
           L R  I +A  LF  M  EG  P+  TY  LIN  C  GN   A+RL   M+ +  +P+ 
Sbjct: 109 LNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNV 168

Query: 699 CTHSALLLKQLDKDYKV 715
             ++  ++  L KD +V
Sbjct: 169 FAYNT-IIDSLCKDRQV 184



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 55/112 (49%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F+ +   GL PDV   + +I  L   G   +A +++R M E G   +   YNT+   F 
Sbjct: 401 LFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFL 460

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
           +  E   A++LL EM  RG S +  T  + +   S +G  +  + ++RD  K
Sbjct: 461 RNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILRDFCK 512


>gi|357121428|ref|XP_003562422.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Brachypodium distachyon]
          Length = 663

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 157/585 (26%), Positives = 271/585 (46%), Gaps = 19/585 (3%)

Query: 89  DPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVE 148
           DP ++V ++ R       A+RF+ W E++PG    +F    ++ +L   G          
Sbjct: 89  DP-IVVNLVVRGLSDSETAVRFYWWAESRPGFDHSQFAIAYLVSLLFMDGNF-------- 139

Query: 149 TVVCVNMHGILDVLIGGGLSSCVSI--KILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLP 206
                    +L   +G   S  V++   +  +LL  Y +    +  +  F++M+ +G   
Sbjct: 140 --------ALLSEFLGRVKSQGVALHRSLYRILLSGYVRAGKFDSVIETFDEMVMSGCRE 191

Query: 207 DVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELL 266
              + NR I VL  N       + Y M    G   +  TY+  + + C+   ++   ELL
Sbjct: 192 FGVDYNRYIGVLVKNCCFDLVEKYYDMALAKGFCLTPFTYSRWISALCQSNRIELVQELL 251

Query: 267 WEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEK 326
            +M   GCSP+    N+ I    +   L  A  ++  M   G      +Y  ++ G  + 
Sbjct: 252 VDMDKLGCSPDIWACNIYIYYLCKQNRLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDN 311

Query: 327 GLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISY 386
               EA+ L EEMV R + P + +   LI+GLCK  +V +A      ML  ++   +  Y
Sbjct: 312 KKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIY 371

Query: 387 NTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMIN 446
           N L+ G+ R+G+I +A+ +   +R+    P +VTYN L++  C  G +E A++L   M  
Sbjct: 372 NALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMET 431

Query: 447 QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSE 506
            G+ PD  +Y  ++ G CK   L  A  F ++ +  G   D  +    I    K      
Sbjct: 432 SGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKS 491

Query: 507 AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIH 566
           A  L +EM  KG   D +TY  L++GL  +G    A EL  +M+     P+   Y  ++H
Sbjct: 492 ALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQIDPNVNLYNIMLH 551

Query: 567 ASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRP 626
              ++G  +R + +F++M++K +SP  VT+  LI+    R R   A   F +M+ +G+ P
Sbjct: 552 HLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLFKDMRTRGVEP 611

Query: 627 NVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILIN 671
           + +T+  LI+GL    +   AY ++  M E GI+ ++     LI+
Sbjct: 612 DTLTFKYLISGLLDEGKSTLAYEVWEYMMENGIILDREVSERLIS 656



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 138/503 (27%), Positives = 227/503 (45%), Gaps = 1/503 (0%)

Query: 220 DNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGV 279
           D  F++ +  + R+  + G+      Y  +L  + + G+    +E   EM   GC   GV
Sbjct: 136 DGNFALLSEFLGRVKSQ-GVALHRSLYRILLSGYVRAGKFDSVIETFDEMVMSGCREFGV 194

Query: 280 TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
            YN  I    +N   +         L  G  ++  +Y+  I    +   +     L  +M
Sbjct: 195 DYNRYIGVLVKNCCFDLVEKYYDMALAKGFCLTPFTYSRWISALCQSNRIELVQELLVDM 254

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
              G +P +   NI IY LCK  R+ DA     +M  K   PD+++Y T++ G C +   
Sbjct: 255 DKLGCSPDIWACNIYIYYLCKQNRLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKF 314

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
            EA  L++E+  R+L P V +   LI GLC+   ++ A +L   M+   I   V  Y  +
Sbjct: 315 AEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNAL 374

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           ++G  + G++  A +  + M   G +PD   Y   +     +G   +A +L  +M   G 
Sbjct: 375 ISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGV 434

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
            PD  +YN L+ GLCK   L++A   +   +  G   D ++   +I A  +   ++   +
Sbjct: 435 NPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSALE 494

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLC 639
           LF  M  KG+    VTY  LI+   + G   LA   F +M    I PNV  YN +++ LC
Sbjct: 495 LFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQIDPNVNLYNIMLHHLC 554

Query: 640 RLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYC 699
           ++    +A  +F  M ++ + P+  T+  LI          EAL L+K+M  R +EPD  
Sbjct: 555 KVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLFKDMRTRGVEPDTL 614

Query: 700 THSALLLKQLDKDYKVHAVEYLE 722
           T   L+   LD+     A E  E
Sbjct: 615 TFKYLISGLLDEGKSTLAYEVWE 637



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 172/384 (44%)

Query: 341 TRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIG 400
           ++GVA   + Y IL+ G  + G+       F EM+        + YN  +    ++    
Sbjct: 151 SQGVALHRSLYRILLSGYVRAGKFDSVIETFDEMVMSGCREFGVDYNRYIGVLVKNCCFD 210

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
                +D   ++    T  TY+  I  LC+   +E+ Q+L  +M   G  PD+    I +
Sbjct: 211 LVEKYYDMALAKGFCLTPFTYSRWISALCQSNRIELVQELLVDMDKLGCSPDIWACNIYI 270

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFP 520
              CK   L  A +   +M  KG  PD   Y T ++G       +EA  L EEM+ +   
Sbjct: 271 YYLCKQNRLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLK 330

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           PD+ +   L+ GLCK   ++EA EL  +M+          Y ++I      G + +   +
Sbjct: 331 PDVFSCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKI 390

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
            + M   G  P +VTY +L++ +   G +E A     +M+  G+ P+  +YN L+ GLC+
Sbjct: 391 ISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCK 450

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
             ++D+A+    D  E G   +  +  ILI+  C     + AL L+KEM  + ++ D  T
Sbjct: 451 THQLDKAFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADAVT 510

Query: 701 HSALLLKQLDKDYKVHAVEYLESL 724
           +  L+       Y   A E  E +
Sbjct: 511 YGTLINGLFSVGYYNLAEELFEQM 534



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/256 (21%), Positives = 95/256 (37%), Gaps = 4/256 (1%)

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAK-GFPPDLITYNV 528
           SM  E   E+ R  ++ D       + G   L D+  A R      ++ GF         
Sbjct: 72  SMCSEPLVELERLDVELDPIVVNLVVRG---LSDSETAVRFYWWAESRPGFDHSQFAIAY 128

Query: 529 LVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKG 588
           LV  L   G+    +E L ++   G       Y  ++   +  G      + F+ M+  G
Sbjct: 129 LVSLLFMDGNFALLSEFLGRVKSQGVALHRSLYRILLSGYVRAGKFDSVIETFDEMVMSG 188

Query: 589 LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAY 648
                V Y   I         +L   Y+     KG      TY+  I+ LC+  RI+   
Sbjct: 189 CREFGVDYNRYIGVLVKNCCFDLVEKYYDMALAKGFCLTPFTYSRWISALCQSNRIELVQ 248

Query: 649 GLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQ 708
            L +DM++ G  P+ +   I I   C      +AL++ ++M  +   PD  T+  ++   
Sbjct: 249 ELLVDMDKLGCSPDIWACNIYIYYLCKQNRLPDALQMVEKMRTKGTSPDVVTYQTVVSGL 308

Query: 709 LDKDYKVHAVEYLESL 724
            D      A+   E +
Sbjct: 309 CDNKKFAEAIGLWEEM 324


>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Brachypodium distachyon]
          Length = 571

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 126/381 (33%), Positives = 203/381 (53%), Gaps = 3/381 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
            F   LR  + PD+   N +I  L   G   KA +V + +  +G+ PS+VTYNT++D +C
Sbjct: 172 AFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYC 231

Query: 255 KEGE---MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKV 311
           K G    M     LL EM   G SPN VT+NVL+ G+ ++     A  +  +M + G+  
Sbjct: 232 KRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAA 291

Query: 312 SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRF 371
           S  +Y+ ++ G   +G + E + L +EM   G+ P LAT N ++ G CK G ++DA    
Sbjct: 292 SVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWI 351

Query: 372 FEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY 431
             M +KNV P++++Y  L+ GY R   + +A  + + +  + + P    YN LI G  R 
Sbjct: 352 DSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRN 411

Query: 432 GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAY 491
           GD      L + M  +G+  D++TY +++   C  G +  A +  +EML  GL+P    Y
Sbjct: 412 GDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTY 471

Query: 492 TTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
            T I G  + G+   AY ++  M       +++TYNV +  LC++G +EE NELL +M+ 
Sbjct: 472 NTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLE 531

Query: 552 DGFIPDHITYTSIIHASLEMG 572
            G +P+ +TY +I    +E G
Sbjct: 532 KGLVPNGVTYDTIKEGMMEKG 552



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 123/402 (30%), Positives = 214/402 (53%), Gaps = 3/402 (0%)

Query: 240 KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
           +PS  + N +L +      +  A         R  SP+  T+N++I+G  + G+L +A  
Sbjct: 147 RPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGD 206

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLE---EEMVTRGVAPTLATYNILIY 356
           + +D+   GL  S  +YN II GY ++G      +++   +EMV  G++P   T+N+L+ 
Sbjct: 207 VAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVN 266

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           G CK    + A   F EM ++ +   +++Y+ L++G C  G + E   L DE++   LVP
Sbjct: 267 GYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVP 326

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
            + T N++++G C+ G +  A+   ++M  + + P+V+TYTI+V+G  ++  +  A    
Sbjct: 327 NLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVK 386

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
             M  KG++P+   Y   IAG  + GD      L +EM  KG   D++TYNVL+  LC  
Sbjct: 387 EAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVK 446

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G + +A +LL +M+  G  P H+TY +II+   E G+++   ++   M +      +VTY
Sbjct: 447 GEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTY 506

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
            V I      G++E      +EM  KG+ PN +TY+ +  G+
Sbjct: 507 NVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGM 548



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 211/397 (53%), Gaps = 3/397 (0%)

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           P+  + N L++       ++ A    +  L+  +     ++N +I G  + G L +A ++
Sbjct: 148 PSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDV 207

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH---RFFEMLRKNVIPDIISYNTLLYG 392
            +++   G+AP++ TYN +I G CK GR     H      EM+   + P+ +++N L+ G
Sbjct: 208 AKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNG 267

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
           YC+  N   A  +F+E++ + +  +VVTY+ L+ GLC  G +E   +L + M + G++P+
Sbjct: 268 YCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPN 327

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
           + T   ++NG CK G ++ A  + + M +K ++P+   YT  + G  +L    +A  ++E
Sbjct: 328 LATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKE 387

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
            M  KG  P+   YN L+ G  + G     + LL +M   G   D +TY  +I A    G
Sbjct: 388 AMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKG 447

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
           ++R+   L + ML  GL P  +TY  +I+ +  +G ++ A+   + M+    R NV+TYN
Sbjct: 448 EVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYN 507

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL 669
             I  LCR+ ++++   L  +M E+G++PN  TY  +
Sbjct: 508 VFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTI 544



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/375 (31%), Positives = 185/375 (49%), Gaps = 3/375 (0%)

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGE 401
           R V+P L T+NI+I GLCK G++  A     ++    + P +++YNT++ GYC+ G  G 
Sbjct: 179 RRVSPDLFTFNIVISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGR 238

Query: 402 AF---LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
            +    L  E+    + P  VT+N L++G C+  +   A ++ E M  QGI   V+TY+ 
Sbjct: 239 MYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSA 298

Query: 459 MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
           +V G C  G +    +  +EM   GL P+     + + G  K G  ++A    + M  K 
Sbjct: 299 LVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKN 358

Query: 519 FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGR 578
             P+++TY +LV G  +L  +++A  +   M G G  P+   Y  +I      GD R   
Sbjct: 359 VKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVS 418

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
            L + M  KG+   +VTY VLI A   +G +  A     EM + G+ P  +TYN +ING 
Sbjct: 419 GLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGY 478

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
           C    I  AY +   ME+     N  TY + I   C  G  +E   L  EML++ + P+ 
Sbjct: 479 CEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNG 538

Query: 699 CTHSALLLKQLDKDY 713
            T+  +    ++K Y
Sbjct: 539 VTYDTIKEGMMEKGY 553



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 127/459 (27%), Positives = 209/459 (45%), Gaps = 50/459 (10%)

Query: 68  EKPWAFCNNRWVSDHFQAVVSDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVF 127
            +P AF  NR +S    A                E+  +A R F+    +  V  D F F
Sbjct: 146 HRPSAFSVNRLLSALVAA----------------ERVDLAERAFK-AALRRRVSPDLFTF 188

Query: 128 CTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKS 187
             ++  L ++G LR A  V +           D+   G   S V+    + ++  Y K+ 
Sbjct: 189 NIVISGLCKTGQLRKAGDVAK-----------DIRAWGLAPSVVT---YNTIIDGYCKRG 234

Query: 188 MVEQCLLV---FNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
              +   V     +M+  G+ P+    N ++     +  +  A  V+  M + GI  S+V
Sbjct: 235 RAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVV 294

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TY+ ++   C EG+++E ++L+ EM+  G  PN  T N ++ GF + G +  A G I  M
Sbjct: 295 TYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSM 354

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
            +  +K +  +Y  ++ GY     + +AL ++E M  +GV P    YN LI G  + G  
Sbjct: 355 EQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDW 414

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
                   EM  K V  DI++YN L+   C  G + +A  L DE+    L P  +TYNT+
Sbjct: 415 RSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTI 474

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           I+G C  G+++ A +++  M       +V+TY + +   C+MG +    E  NEML KGL
Sbjct: 475 INGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGL 534

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
            P+   Y T                ++E M+ KG+ PD+
Sbjct: 535 VPNGVTYDT----------------IKEGMMEKGYTPDV 557



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 159/333 (47%), Gaps = 5/333 (1%)

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           EAFLL  +   R+  P+  + N L+  L     +++A++  +  + + + PD+ T+ I++
Sbjct: 134 EAFLLAGDAHPRHR-PSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVI 192

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR---LQEEMLAK 517
           +G CK G L  A +   ++   GL P    Y T I G  K G     Y    L +EM+  
Sbjct: 193 SGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEA 252

Query: 518 GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRG 577
           G  P+ +T+NVLV+G CK  +   A  +  +M   G     +TY++++      G +  G
Sbjct: 253 GISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEG 312

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
             L + M   GL P L T   +++    +G +  A  +   M+ K ++PNV+TY  L++G
Sbjct: 313 VKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDG 372

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
             RL ++  A  +   M  +G+ PN   Y  LI      G+W+    L  EM  + +  D
Sbjct: 373 YRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRAD 432

Query: 698 YCTHSALLLKQLDKDYKVHAVEYL-ESLTLGAE 729
             T++ L+     K     AV+ L E L +G E
Sbjct: 433 IVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLE 465


>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
 gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
          Length = 545

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 150/450 (33%), Positives = 237/450 (52%), Gaps = 9/450 (2%)

Query: 267 WEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEK 326
           W  +    + N  T N L++ + +   +E A    +  +K   +    SYN ++ G+ + 
Sbjct: 91  WAGKQSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKA 150

Query: 327 GLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISY 386
           G + +AL L  EM   G+A  L ++NI++ GLC  G++S A   F +M      P++ISY
Sbjct: 151 GDVKKALALFGEMKDSGIA-VLRSHNIVLRGLCSGGKISMAWEVFKDM-SGIFSPNLISY 208

Query: 387 NTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMIN 446
             ++ G C+S  + +A  LF ++  + + P VVTY  LIDGL +   ++ A  L E    
Sbjct: 209 TIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARA 268

Query: 447 QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG-LQPDRFAYTTQIAGELKLGDTS 505
           +G  P V+TY  M++G CK G +  A   +++M+R+  L+PD F Y+  I G L L +  
Sbjct: 269 KGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALING-LNLSNRG 327

Query: 506 E-AYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKM-VGDGFIPDHITYTS 563
           E AY L EEML  G  PD++TYN L+ GLCK G  ++A E+ RKM VG+   P+ ITYT 
Sbjct: 328 EKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTV 387

Query: 564 IIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
           +I    ++  L     L   M  + L P  VT+T +I       R++ A   F  +  K 
Sbjct: 388 LIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIG-KT 446

Query: 624 IRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEAL 683
            +P+ + +N ++ G C++ RID A  L   M + G  P   TYT L+   C  G + +AL
Sbjct: 447 CKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDAL 506

Query: 684 RLYKEMLDREIEPDYCTHSALLLKQLDKDY 713
            +Y EM++    P+   H A L+ +   D+
Sbjct: 507 IMYHEMIEMGFPPE--RHLAELVDRTRTDH 534



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 131/423 (30%), Positives = 219/423 (51%), Gaps = 7/423 (1%)

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           T N +L  + K   +++A             P+ V+YN L+ GF + G++++A  L  +M
Sbjct: 104 TCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEM 163

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGV-APTLATYNILIYGLCKWGR 363
              G+ V   S+N ++ G    G +  A  + ++M   G+ +P L +Y I+I GLCK  +
Sbjct: 164 KDSGIAV-LRSHNIVLRGLCSGGKISMAWEVFKDM--SGIFSPNLISYTIMIDGLCKSRK 220

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           V  A   F +M+ K + PD+++Y  L+ G  +   + EA+ LF+E R++   PTVVTYNT
Sbjct: 221 VDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNT 280

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGIL-PDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           +IDGLC+ G +E A  L ++M+ +  L PD+ TY+ ++NG         A E + EML  
Sbjct: 281 MIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDT 340

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM-LAKGFPPDLITYNVLVHGLCKLGSLEE 541
           G  PD   Y T + G  K G   +A  +  +M +     P++ITY VL+   CK+  L +
Sbjct: 341 GCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGD 400

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A +L ++M G   +PD +T+T++I    +   +    +LF + + K   P  V +  ++ 
Sbjct: 401 AVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFES-IGKTCKPDSVLFNTMLA 459

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
            +    R++ A      M   G  P + TY AL+ G CR  R   A  ++ +M E G  P
Sbjct: 460 GYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPP 519

Query: 662 NKY 664
            ++
Sbjct: 520 ERH 522



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 134/470 (28%), Positives = 233/470 (49%), Gaps = 20/470 (4%)

Query: 90  PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVET 149
           P+L+ +V++RI + P  A   F+W   Q     + F    +L + +++  +  A+   ++
Sbjct: 69  PDLVGKVIHRIPD-PNTAWEVFQWAGKQSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQS 127

Query: 150 VVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVK 209
               +M  + +          VS    + L+  + K   V++ L +F +M  +G+   ++
Sbjct: 128 ----HMKNVFE-------PDEVS---YNTLMNGFFKAGDVKKALALFGEMKDSGIAV-LR 172

Query: 210 NCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM 269
           + N +++ L   G    A EV++ M      P++++Y  M+D  CK  ++ +A+ L  +M
Sbjct: 173 SHNIVLRGLCSGGKISMAWEVFKDMSGI-FSPNLISYTIMIDGLCKSRKVDKAITLFKQM 231

Query: 270 QGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLL 329
             +   P+ VTY  LI G  +   +++A  L  +    G   +  +YN +I G  + G +
Sbjct: 232 VDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRI 291

Query: 330 VEALNLEEEMVTRG-VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNT 388
             AL L ++MV    + P + TY+ LI GL    R   A   + EML     PD+++YNT
Sbjct: 292 ENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNT 351

Query: 389 LLYGYCRSGNIGEAFLLFDELRSRNLV-PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
           LL G C+SG   +A  +F ++   N+  P V+TY  LID  C+   L  A +L + M  +
Sbjct: 352 LLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGR 411

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
            +LPD +T+T ++   CK   +  A E F E + K  +PD   + T +AG  K+    +A
Sbjct: 412 SLLPDAVTFTTVIQKLCKESRIDEAHELF-ESIGKTCKPDSVLFNTMLAGYCKITRIDDA 470

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
            +L + ML  G  P L TY  LV G C+ G   +A  +  +M+  GF P+
Sbjct: 471 KKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPPE 520



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/341 (31%), Positives = 175/341 (51%), Gaps = 6/341 (1%)

Query: 387 NTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMIN 446
           N LL  Y ++  + +A L F         P  V+YNTL++G  + GD++ A  L   M +
Sbjct: 106 NNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMKD 165

Query: 447 QGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL-QPDRFAYTTQIAGELKLGDTS 505
            GI   + ++ I++ G C  G +SMA E F +M   G+  P+  +YT  I G  K     
Sbjct: 166 SGIAV-LRSHNIVLRGLCSGGKISMAWEVFKDM--SGIFSPNLISYTIMIDGLCKSRKVD 222

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           +A  L ++M+ K   PD++TY  L+ GL K   ++EA +L  +    G  P  +TY ++I
Sbjct: 223 KAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMI 282

Query: 566 HASLEMGDLRRGRDLFNNMLRKG-LSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
               + G +     L+++M+R+  L P + TY+ LI+      R E A+  + EM   G 
Sbjct: 283 DGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGC 342

Query: 625 RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGIL-PNKYTYTILINENCNAGNWQEAL 683
            P+V+TYN L++GLC+    D+A  +F  M    +  PN  TYT+LI+  C      +A+
Sbjct: 343 SPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAV 402

Query: 684 RLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           +L KEM  R + PD  T + ++ K   +     A E  ES+
Sbjct: 403 KLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESI 443



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 97/230 (42%), Gaps = 23/230 (10%)

Query: 107 ALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVV-------CVNMHGIL 159
           AL  +  +  +P +K D F +  ++  L  S     AY + E ++        V  + +L
Sbjct: 294 ALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLL 353

Query: 160 DVLIGGG-------------LSSCVSIKILDLLLLI--YTKKSMVEQCLLVFNKMLRNGL 204
           D L   G             + +     ++   +LI  + K   +   + +  +M    L
Sbjct: 354 DGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSL 413

Query: 205 LPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALE 264
           LPD      +I+ L       +A E++  +G+   KP  V +NTML  +CK   + +A +
Sbjct: 414 LPDAVTFTTVIQKLCKESRIDEAHELFESIGK-TCKPDSVLFNTMLAGYCKITRIDDAKK 472

Query: 265 LLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           L   M   GC+P   TY  L+TGF R G    A  +  +M+++G     H
Sbjct: 473 LHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPPERH 522


>gi|238478688|ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332193082|gb|AEE31203.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 163/610 (26%), Positives = 289/610 (47%), Gaps = 19/610 (3%)

Query: 90  PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVET 149
           P  +  VL R ++  R+AL+FF W + Q   + D  V+ ++LE+L ++ L + +  V+  
Sbjct: 174 PSQVCAVL-RSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVL-- 230

Query: 150 VVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVK 209
            V +   GI             + +    +++ Y++   +   L V   M R G+ P++ 
Sbjct: 231 -VLMKRRGIYR-----------TPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLL 278

Query: 210 NCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEM 269
            CN  I V        KA      M   GI P++VTYN M+  +C    ++EA+ELL +M
Sbjct: 279 ICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDM 338

Query: 270 QGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK-LGLKVSAHSYNPIICGYSEKGL 328
             +GC P+ V+Y  ++    +   + + R L++ M K  GL     +YN +I   ++   
Sbjct: 339 HSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDH 398

Query: 329 LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK-NVIPDIISYN 387
             EAL   ++   +G       Y+ +++ LCK GR+S+A+    EML K +  PD+++Y 
Sbjct: 399 ADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYT 458

Query: 388 TLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
            ++ G+CR G + +A  L   + +    P  V+Y  L++G+CR G    A+++       
Sbjct: 459 AVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEH 518

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
              P+ ITY+++++G  + G LS A +   EM+ KG  P        +    + G T EA
Sbjct: 519 WWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEA 578

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
            +  EE L KG   +++ +  ++HG C+   L+ A  +L  M       D  TYT+++  
Sbjct: 579 RKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDT 638

Query: 568 SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
             + G +    +L   ML KG+ PT VTY  +IH +   G+++       +M  +  +  
Sbjct: 639 LGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISR--QKC 696

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYK 687
              YN +I  LC L ++++A  L   +       +  T   L+      G    A ++  
Sbjct: 697 RTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVAC 756

Query: 688 EMLDREIEPD 697
            M +R + PD
Sbjct: 757 RMFNRNLIPD 766



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 136/464 (29%), Positives = 224/464 (48%), Gaps = 2/464 (0%)

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           + Y +ML+   K    Q +  +L  M+ RG       ++ ++  +SR G+L  A  ++  
Sbjct: 208 MVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTL 267

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M + G++ +    N  I  +     L +AL   E M   G+ P + TYN +I G C   R
Sbjct: 268 MQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHR 327

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL-RSRNLVPTVVTYN 422
           V +A     +M  K  +PD +SY T++   C+   I E   L  ++ +   LVP  VTYN
Sbjct: 328 VEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYN 387

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           TLI  L ++   + A    ++   +G   D + Y+ +V+  CK G +S A++  NEML K
Sbjct: 388 TLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSK 447

Query: 483 G-LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
           G   PD   YT  + G  +LG+  +A +L + M   G  P+ ++Y  L++G+C+ G   E
Sbjct: 448 GHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLE 507

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
           A E++       + P+ ITY+ I+H     G L    D+   M+ KG  P  V   +L+ 
Sbjct: 508 AREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQ 567

Query: 602 AHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILP 661
           +    GR   A  +  E   KG   NV+ +  +I+G C+   +D A  +  DM       
Sbjct: 568 SLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHA 627

Query: 662 NKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           + +TYT L++     G   EA  L K+ML + I+P   T+  ++
Sbjct: 628 DVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVI 671



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 170/362 (46%), Gaps = 3/362 (0%)

Query: 195 VFNKMLRNGLLP-DVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSF 253
           + N+ML  G  P DV     ++      G   KA+++ ++M   G KP+ V+Y  +L+  
Sbjct: 440 LINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGM 499

Query: 254 CKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSA 313
           C+ G+  EA E++   +    SPN +TY+V++ G  R G+L +A  ++R+M+  G     
Sbjct: 500 CRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGP 559

Query: 314 HSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFE 373
              N ++      G   EA    EE + +G A  +  +  +I+G C+   +  A     +
Sbjct: 560 VEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDD 619

Query: 374 MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGD 433
           M   N   D+ +Y TL+    + G I EA  L  ++  + + PT VTY T+I   C+ G 
Sbjct: 620 MYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGK 679

Query: 434 LEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT 493
           ++    + E MI++     +  Y  ++   C +G L  A     ++LR   + D      
Sbjct: 680 VDDLVAILEKMISRQKCRTI--YNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYA 737

Query: 494 QIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDG 553
            + G LK G    AY++   M  +   PD+     L   L   G ++EA++L+ ++V  G
Sbjct: 738 LMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERG 797

Query: 554 FI 555
            I
Sbjct: 798 HI 799



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 1/202 (0%)

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
           D + Y  ++  L K    + +  +L  M   G       ++ ++ +    G LR    + 
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
             M R G+ P L+     I       RLE A  +   MQV GI PNV+TYN +I G C L
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 325

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEML-DREIEPDYCT 700
            R+++A  L  DM  +G LP+K +Y  ++   C      E   L K+M  +  + PD  T
Sbjct: 326 HRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVT 385

Query: 701 HSALLLKQLDKDYKVHAVEYLE 722
           ++ L+      D+   A+ +L+
Sbjct: 386 YNTLIHMLTKHDHADEALWFLK 407


>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
 gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
          Length = 479

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 148/480 (30%), Positives = 229/480 (47%), Gaps = 21/480 (4%)

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           VT N +LD   +    ++ + +   +  + C PN ++Y  L+    R G++++A   I +
Sbjct: 1   VTCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAE 60

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M +  L     +YN +I    +   +  A+   E M      P + TYN L+ GLCK GR
Sbjct: 61  MAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE----PDVVTYNTLLGGLCKNGR 116

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           V+ A   F  M    + P  ++Y TL+  +C+      A+ L   + SR   PTV +Y +
Sbjct: 117 VAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCS 176

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           +I+GLC+   ++ A QL E M   G  PD +TY  +++G C    L  A++    M+  G
Sbjct: 177 IINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENG 236

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
            QPD+  +T  I G        EA+ L + M  +G  PDL+T+ VLV  LC L  L  A 
Sbjct: 237 FQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPAL 296

Query: 544 ELLRKMVGDGFIPDH-ITYTSIIHASLEMGDLRRGRD----LFNNMLRKGLSPTLVTYTV 598
            ++R        P+  I YT I     E+G  RRG D    L   M R+G+ P +VTYT 
Sbjct: 297 SVVRNYPA---CPEAVILYTPIFR---ELGR-RRGFDRAARLLQKMARRGVPPNVVTYTA 349

Query: 599 LIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEG 658
                        A+  F  M  +GI P+++ YN L++G C+  R+D A  +   M++ G
Sbjct: 350 FFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSG 409

Query: 659 ILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL-----LLKQLDKDY 713
           + PN  TY  L+  +C  G  +    L   M+ R  +PD  T S L     ++ Q D  Y
Sbjct: 410 LPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAAY 469



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 140/463 (30%), Positives = 216/463 (46%), Gaps = 23/463 (4%)

Query: 166 GLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSV 225
            LS C  +K L        +   +++      +M R  L+PDV   N +I  L       
Sbjct: 35  ALSYCYLVKAL-------CRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTL------C 81

Query: 226 KAREVYRMMGEFGI--KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNV 283
           KAR + R +  F    +P +VTYNT+L   CK G + +A  L   M+G G +P+ VTY  
Sbjct: 82  KARRISRAIEFFETMPEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTT 141

Query: 284 LITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRG 343
           LI  F +  + E A GL++ M       + +SY  II G  +   + +A  L EEM   G
Sbjct: 142 LIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAG 201

Query: 344 VAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAF 403
             P   TYN LI+GLC   R+ +A+     M+     PD I++  L+ G C +  I EAF
Sbjct: 202 CKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAF 261

Query: 404 LLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGS 463
           +LF  +  +   P +VT+  L+  LC    L  A  +  N         VI YT +    
Sbjct: 262 VLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNY--PACPEAVILYTPIFREL 319

Query: 464 CKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSE---AYRLQEEMLAKGFP 520
            +      A     +M R+G+ P+   YT    G   LGD  E   AYR    ML +G  
Sbjct: 320 GRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKG---LGDWKEGMRAYREFRRMLEQGIE 376

Query: 521 PDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDL 580
           PD++ YNVLV G CK   L+ A +++R M   G  P+ +TY +++      G +    +L
Sbjct: 377 PDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGEL 436

Query: 581 FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKG 623
            + M+ +G  P + T++ L+      G+ + A+ + +    +G
Sbjct: 437 LHTMVSRGRQPDVATWSTLVAGLFMVGQADAAYSFLNLAMSQG 479



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 136/478 (28%), Positives = 219/478 (45%), Gaps = 12/478 (2%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           +LDLL     +    EQ ++VF ++      P+  +   ++K L   G   KA      M
Sbjct: 6   LLDLL----ERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEM 61

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
               + P + TYN ++D+ CK   +  A+E    M      P+ VTYN L+ G  +NG +
Sbjct: 62  AREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMP----EPDVVTYNTLLGGLCKNGRV 117

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL 354
            QA  L   M   G+  S  +Y  +I  + +      A  L + M +R  +PT+ +Y  +
Sbjct: 118 AQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSI 177

Query: 355 IYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNL 414
           I GLCK  +V  A   F EM      PD ++YNTL++G C    + EA  L   +     
Sbjct: 178 INGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGF 237

Query: 415 VPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMARE 474
            P  +T+  LI+GLC    ++ A  L + M  QG  PD++T+T++V+  C +  L   R 
Sbjct: 238 QPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKL---RP 294

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGEL-KLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGL 533
             + +      P+     T I  EL +      A RL ++M  +G PP+++TY     GL
Sbjct: 295 ALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGL 354

Query: 534 CKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTL 593
                   A    R+M+  G  PD + Y  ++    +   L     +   M + GL P +
Sbjct: 355 GDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNI 414

Query: 594 VTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLF 651
           VTY  L+  H  +G++E        M  +G +P+V T++ L+ GL  + + D AY   
Sbjct: 415 VTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAAYSFL 472


>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
 gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
          Length = 501

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 118/339 (34%), Positives = 200/339 (58%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A  V   M + GI+P  VT+ T+++  C EG ++EA+EL  EM GR   PN VT+ +L+ 
Sbjct: 140 AVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVD 199

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
              + G + +AR +   M + G++ + ++YN ++ GY  +  + +A  + E MV +G AP
Sbjct: 200 VLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAP 259

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
           ++ +Y+ILI G CK  R+ +A+    +M  K +IP+ ++YNTL+ G C + ++ EA  LF
Sbjct: 260 SVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELF 319

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
            ++ S  ++P + TY+ L+DGLC++G LE A +L  +M  + + PD++ Y I++ G    
Sbjct: 320 KKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIA 379

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G L +A+E F+++   G++P    Y   I G LK G + EAY+L  +M   GF PD  +Y
Sbjct: 380 GKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSY 439

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           NV++ G  +      A +L+ +MVG  F  D  T+  ++
Sbjct: 440 NVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLL 478



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 129/373 (34%), Positives = 196/373 (52%)

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYG 392
           ++L  +M   GVA    T NILI  LC+   +  A     +M +  + PD +++ TL+ G
Sbjct: 106 VSLCNQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLING 165

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
            C  G I EA  LF+E+  R+ +P  VT+  L+D LC+ G +  A+ + E M  +G+ P+
Sbjct: 166 LCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPN 225

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
           + TY  ++NG C    ++ A + F  M+ KG  P   +Y+  I G  K     EA  L  
Sbjct: 226 IYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLT 285

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
           +M  K   P+ +TYN L+ GLC   SL EA EL +KM   G +P+  TY+ ++    + G
Sbjct: 286 QMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHG 345

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
            L     L  +M  + L P +V Y +LI      G+LE+A   FS++   GIRP+V TYN
Sbjct: 346 HLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYN 405

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDR 692
            +I GL +    D+AY LF  ME++G LP+  +Y ++I       +   A++L  EM+ R
Sbjct: 406 IMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGR 465

Query: 693 EIEPDYCTHSALL 705
               D  T   LL
Sbjct: 466 RFSADSSTFKMLL 478



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/417 (29%), Positives = 195/417 (46%), Gaps = 1/417 (0%)

Query: 220 DNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGV 279
           D G        YRM+     +PS V     L S  K+ +    + L  +M   G + N  
Sbjct: 64  DIGIDDAMASFYRMI-HMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDY 122

Query: 280 TYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEM 339
           T N+LI    R   +  A  ++  M KLG++  + ++  +I G   +G + EA+ L  EM
Sbjct: 123 TLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEM 182

Query: 340 VTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNI 399
             R   P   T+ IL+  LCK G VS+AR  F  M  K V P+I +YN L+ GYC    +
Sbjct: 183 AGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEM 242

Query: 400 GEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIM 459
            +A  +F+ +  +   P+V +Y+ LI+G C+   ++ A+ L   M  + ++P+ +TY  +
Sbjct: 243 NDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTL 302

Query: 460 VNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGF 519
           + G C   +L  A+E F +M   G+ P+   Y+  + G  K G   EA +L   M  +  
Sbjct: 303 MQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKL 362

Query: 520 PPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRD 579
            PD++ YN+L+ G+   G LE A EL  K+  +G  P   TY  +I   L+ G       
Sbjct: 363 EPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYK 422

Query: 580 LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
           LF  M   G  P   +Y V+I           A     EM  +    +  T+  L++
Sbjct: 423 LFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLD 479



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/375 (31%), Positives = 190/375 (50%), Gaps = 7/375 (1%)

Query: 176 LDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMG 235
           L++L+    + S +   + V +KM + G+ PD      +I  L + G   +A E++  M 
Sbjct: 124 LNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMA 183

Query: 236 EFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELE 295
                P+ VT+  ++D  CK+G + EA  +   M  +G  PN  TYN L+ G+    E+ 
Sbjct: 184 GRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMN 243

Query: 296 QARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILI 355
            A  +   M+  G   S HSY+ +I GY +   + EA  L  +M  + + P   TYN L+
Sbjct: 244 DASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLM 303

Query: 356 YGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLV 415
            GLC    + +A+  F +M    ++P++ +Y+ LL G C+ G++ EA  L   ++ R L 
Sbjct: 304 QGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLE 363

Query: 416 PTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREF 475
           P +V YN LI G+   G LEVA++L   +   GI P V TY IM+ G  K G    A + 
Sbjct: 364 PDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKL 423

Query: 476 FNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK 535
           F +M   G  PD  +Y   I G L+  D S A +L +EM+ + F  D  T+ +L+     
Sbjct: 424 FRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLL----- 478

Query: 536 LGSLEEANELLRKMV 550
              LE  +E++ + +
Sbjct: 479 --DLESHDEIISRFM 491



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 165/357 (46%), Gaps = 5/357 (1%)

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           + DA   F+ M+  N  P  +     L    +         L +++    +     T N 
Sbjct: 67  IDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNI 126

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           LI+ LCR   +  A  +   M   GI PD +T+T ++NG C  G +  A E FNEM  + 
Sbjct: 127 LINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRD 186

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
             P+   +T  +    K G  SEA  + E M  KG  P++ TYN L++G C    + +A+
Sbjct: 187 AMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDAS 246

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
           ++   MVG G  P   +Y+ +I+   +   +   + L   M  K L P  VTY  L+   
Sbjct: 247 KVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGL 306

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNK 663
                L  A   F +M   G+ PN+ TY+ L++GLC+   +++A  L   M+E  + P+ 
Sbjct: 307 CHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDI 366

Query: 664 YTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSAL---LLKQ--LDKDYKV 715
             Y ILI     AG  + A  L+ ++    I P   T++ +   LLK+   D+ YK+
Sbjct: 367 VLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKL 423



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 139/288 (48%), Gaps = 25/288 (8%)

Query: 126 VFCTILEILIESGLLRSAYWVVETVV------------------CVNMH-----GILDVL 162
            F  ++++L + G++  A  V ET+                   C+ +       + +++
Sbjct: 193 TFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIM 252

Query: 163 IGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNG 222
           +G G +   S+    +L+  Y K   +++   +  +M    L+P+    N +++ L    
Sbjct: 253 VGKGCAP--SVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHAS 310

Query: 223 FSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYN 282
             ++A+E+++ M   G+ P++ TY+ +LD  CK G ++EAL+LL  MQ R   P+ V YN
Sbjct: 311 SLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYN 370

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
           +LI G    G+LE A+ L   +   G++ S  +YN +I G  ++GL  EA  L  +M   
Sbjct: 371 ILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDD 430

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
           G  P   +YN++I G  +    S A     EM+ +    D  ++  LL
Sbjct: 431 GFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLL 478


>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 166/568 (29%), Positives = 260/568 (45%), Gaps = 28/568 (4%)

Query: 88  SDPELLVRVL--NRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYW 145
           + P LL+ VL  N +  K    L FF+W +T   V         ++ +L    L  +   
Sbjct: 49  AKPNLLISVLSSNTLSNKSNTLLSFFKWSQTHLSV--TSLSHLPLISLLSHQKLSDAKSL 106

Query: 146 VVETVVCVNMHGILDVLIGGGLSSCVSIK-ILDLLLLIYTKKSMVEQCLLVFNKMLRNGL 204
           +   +     H +   L+        S++ ILD  +  Y   +       +FN+M R  L
Sbjct: 107 LTAFISADRTHLLHHHLLHSPFKKVQSLRVILDTSIGAYVSCNRPHHAAQIFNRMKRLHL 166

Query: 205 LPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG---EMQE 261
            P++   N +I  L                  +  KPS+     +  +  K G   ++ E
Sbjct: 167 KPNLLTRNTLINALV----------------RYPSKPSVCLSKAIFTNVIKFGVKNKLSE 210

Query: 262 ALELLWEMQGRGCSPNGVTYNVL--ITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPI 319
           A+ L+ +M+   C P+  +YN +  +    R+G+ +Q+   + ++L+ GL     +YN I
Sbjct: 211 AIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLVPHQITYNTI 270

Query: 320 ICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNV 379
           I GY  +G + +A     +MV +   P L T NIL+ GLC  G + +A   F   + K  
Sbjct: 271 IHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGK 330

Query: 380 IPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY-GDLEVAQ 438
             D ++YNT++ G C+ G   EAF L  E+  + L P   TYN ++  L    G +E A 
Sbjct: 331 AIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAF 390

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
           Q +  M+ +   PD+ T  I++ G C  G L  A + FN  + KG   D   Y T I+G 
Sbjct: 391 QFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGL 450

Query: 499 LKLGDTSEAYRLQEEMLAK-GFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
            K G   EA+ L  EM  K G  PD  TYN ++ G C+ G +E+A +   KMV   F PD
Sbjct: 451 CKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPD 510

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
             T   ++      G L +   LFN  + KG +   VTY  +I      GR E AF   +
Sbjct: 511 LFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLA 570

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRID 645
           EM+ K + P+  TYNA++  L    R++
Sbjct: 571 EMKEKKLGPDCYTYNAILCALADAGRME 598



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 141/485 (29%), Positives = 236/485 (48%), Gaps = 18/485 (3%)

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
           V  +T + ++        A ++   M+     PN +T N LI              L+R 
Sbjct: 136 VILDTSIGAYVSCNRPHHAAQIFNRMKRLHLKPNLLTRNTLINA------------LVRY 183

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNIL--IYGLCKW 361
             K  + +S   +  +I  +  K  L EA+ L  +M      P  A+YN +  +  LC+ 
Sbjct: 184 PSKPSVCLSKAIFTNVI-KFGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRS 242

Query: 362 GRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
           G+   +  +  E+L   ++P  I+YNT+++GYCR G + +AF   +++  ++  P + T 
Sbjct: 243 GKTDQSIDKLNELLESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTC 302

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           N L+ GLC  G L+ A +L    I++G   D +TY  +++G CK G    A +   EM  
Sbjct: 303 NILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEE 362

Query: 482 KGLQPDRFAYTTQIAGELKL-GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
           K L PD + Y   +       G   +A++ + +M+ K F PDL T N+L+ GLC  G L+
Sbjct: 363 KKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLD 422

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRK-GLSPTLVTYTVL 599
            A +L    +  G   D +TY +II    + G      DL   M  K GL P   TY  +
Sbjct: 423 NALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTI 482

Query: 600 IHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGI 659
           I  +   G++E AF + ++M  K  +P++ T N L+ GLCR   + +A  LF     +G 
Sbjct: 483 ILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGK 542

Query: 660 LPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVE 719
             +  TY  +I+  C  G ++EA  L  EM ++++ PD  T++A+L    D   ++ A E
Sbjct: 543 AIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAG-RMEAEE 601

Query: 720 YLESL 724
           ++  +
Sbjct: 602 FMSKI 606



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/377 (34%), Positives = 194/377 (51%), Gaps = 5/377 (1%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
           ILD+L L  + K+  +Q +   N++L +GL+P     N II      G   KA +    M
Sbjct: 233 ILDVLWLCRSGKT--DQSIDKLNELLESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKM 290

Query: 235 GEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGEL 294
            E   KP + T N +L   C EG +  AL+L      +G + + VTYN +I+G  + G  
Sbjct: 291 VEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRF 350

Query: 295 EQARGLIRDMLKLGLKVSAHSYNPIICGYSE-KGLLVEALNLEEEMVTRGVAPTLATYNI 353
           E+A  L+ +M +  L    ++YN I+C  ++ +G + +A     +MV +   P L T NI
Sbjct: 351 EEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNI 410

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRN 413
           L+ GLC  G + +A   F   + K    D ++YNT++ G C+ G   EAF L  E+  +N
Sbjct: 411 LLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKN 470

Query: 414 -LVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
            LVP   TYNT+I G CR G +E A Q +  M+ +   PD+ T  I++ G C+ G L  A
Sbjct: 471 GLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKA 530

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
            + FN  + KG   D   Y T I+G  K G   EA+ L  EM  K   PD  TYN ++  
Sbjct: 531 LKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCA 590

Query: 533 LCKLGSLEEANELLRKM 549
           L   G + EA E + K+
Sbjct: 591 LADAGRM-EAEEFMSKI 606



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 114/259 (44%), Gaps = 24/259 (9%)

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS--- 538
           K +Q  R    T I   +       A ++   M      P+L+T N L++ L +  S   
Sbjct: 129 KKVQSLRVILDTSIGAYVSCNRPHHAAQIFNRMKRLHLKPNLLTRNTLINALVRYPSKPS 188

Query: 539 -------------------LEEANELLRKMVGDGFIPDHITYTSIIHAS--LEMGDLRRG 577
                              L EA  L+ KM      PD+ +Y +I+        G   + 
Sbjct: 189 VCLSKAIFTNVIKFGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQS 248

Query: 578 RDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALING 637
            D  N +L  GL P  +TY  +IH +   G++E AF + ++M  K  +P++ T N L+ G
Sbjct: 249 IDKLNELLESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRG 308

Query: 638 LCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           LC    +D A  LF     +G   +  TY  +I+  C  G ++EA  L  EM ++++ PD
Sbjct: 309 LCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPD 368

Query: 698 YCTHSALLLKQLDKDYKVH 716
             T++A+L    D + +V 
Sbjct: 369 CYTYNAILCALADAEGQVE 387


>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
 gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
          Length = 637

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 145/472 (30%), Positives = 233/472 (49%), Gaps = 22/472 (4%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
           +F++MLR G++P V   N +I   R  G   KA+E++  M    I P+++TY +M+   C
Sbjct: 165 LFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLC 224

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           +EG + +A  L   M+  G  PN  TYNVL++G  +  ++  A  L +++L  GL  +A 
Sbjct: 225 EEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAV 284

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
            +  +I G+ +     EA ++  +M   GVAPT+  YN L+ G  + G   +A   + EM
Sbjct: 285 VFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEM 344

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
            R  + PD  + + ++ G C  G I  A    + +R   +      YN LID  CR G+L
Sbjct: 345 TRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNL 404

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           E A      M   G+ P+V++Y+ +++G  K+G + +A   + EM+ KG++P+   YT  
Sbjct: 405 EEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTAL 464

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I G  K G    A+R  +EM+  G  P+ IT +VLV GLC+   +++A   + +  G   
Sbjct: 465 IHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRFVMEHSG--- 521

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNML--RKGLSPTLVTYTVLIHAHAARGRLELA 612
               I Y+ I                F+N     + L P    Y  LI+     G+   A
Sbjct: 522 ----IKYSDI-------------HSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYEA 564

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKY 664
              FS M+  G+  +  TY  LI G C L  +  A  L+ DM + G+ P +Y
Sbjct: 565 GKLFSYMRKSGMISDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKPMRY 616



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 142/500 (28%), Positives = 233/500 (46%), Gaps = 61/500 (12%)

Query: 252 SFCKEGEMQEALEL---LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +  + G + EAL +   LW +      P     N ++ G  +      A  L  +ML+ G
Sbjct: 120 ALSQMGLLDEALYVFRRLWTL------PALPACNAVLDGLVKARRSRCAWELFDEMLRRG 173

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           +  S  +YN +I     +G + +A  + ++MV R + P + TY  +I  LC+ G + DA 
Sbjct: 174 MVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGDAE 233

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F  M    + P+  +YN L+ G+C+  ++  AF+L+ EL +  L+P  V + TLIDG 
Sbjct: 234 RLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGF 293

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+      A+ +  +M   G+ P V  Y  +++G+ + G+   A   + EM R GL PD 
Sbjct: 294 CKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDE 353

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
           F  +  + G    G    A R  E +   G   +   YN L+   C+ G+LEEA     +
Sbjct: 354 FTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTR 413

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M   G  P+ ++Y+S+I    ++G ++    ++  M+ KG+ P +VTYT LIH HA  G 
Sbjct: 414 MTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGG 473

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQA--------------------- 647
           ++ AF +  EM   GI PN IT + L++GLCR  R+  A                     
Sbjct: 474 IDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRFVMEHSGIKYSDIHSFFSN 533

Query: 648 -------------------YGLFID------------MEEEGILPNKYTYTILINENCNA 676
                              YGL++D            M + G++ + +TYT+LI   C  
Sbjct: 534 FTTEEEPLIPNSAIYMTLIYGLYLDGQHYEAGKLFSYMRKSGMISDSFTYTLLIRGQCML 593

Query: 677 GNWQEALRLYKEMLDREIEP 696
           G    A+ LY +M+   ++P
Sbjct: 594 GYVLNAMMLYADMMKIGVKP 613



 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 127/406 (31%), Positives = 214/406 (52%), Gaps = 3/406 (0%)

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
           VL+   S+ G L++A  + R +  L    +  + N ++ G  +      A  L +EM+ R
Sbjct: 116 VLVIALSQMGLLDEALYVFRRLWTLP---ALPACNAVLDGLVKARRSRCAWELFDEMLRR 172

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           G+ P++ TYN LI      G V+ A+  + +M+ + + P++I+Y +++   C  G IG+A
Sbjct: 173 GMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGDA 232

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
             LFD ++   + P   TYN L+ G C+  D+  A  L + ++N G++P+ + +T +++G
Sbjct: 233 ERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDG 292

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            CK    S A++ F +M R G+ P    Y + + G  + GD  EA  L +EM   G  PD
Sbjct: 293 FCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPD 352

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
             T +++V GLC  G ++ A   L  +  DG   +   Y ++I      G+L        
Sbjct: 353 EFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCT 412

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLR 642
            M   G+ P +V+Y+ LI  H+  G++++A   ++EM  KGI PNV+TY ALI+G  +  
Sbjct: 413 RMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNG 472

Query: 643 RIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
            ID A+    +M E GI PN  T ++L++  C     Q+A+R   E
Sbjct: 473 GIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRFVME 518


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 137/523 (26%), Positives = 249/523 (47%), Gaps = 5/523 (0%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGL-LPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           LL  +++ ++    L +F  M R+    P     N +I+ L        A+    +M   
Sbjct: 99  LLTHFSRYALTPLMLRLFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRS 158

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           G +P   T+N+++  +C+  +++ A +L  +M  RG S + V+Y  LI GF   G +++A
Sbjct: 159 GWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEA 218

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L R+M +  +    +++  ++ G  + G   E L + ++M   G  PT   Y  L+  
Sbjct: 219 LELFREMTQPDM----YTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDL 274

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
            C+  +  +A     EM    ++P +++   ++  YCR G +  A  +F+ +R +   P 
Sbjct: 275 WCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPN 334

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           V TYN ++ G C  G +  A  L + M   G+ PDV+TY +++ G C  G++  A     
Sbjct: 335 VWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLR 394

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLG 537
            M   GL  D++ Y   I    K G   EA  L + +  +G  P+ +T+N +++GLCK G
Sbjct: 395 LMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAG 454

Query: 538 SLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYT 597
             + A   L  M+  G+ PD  TY+  I    +    + G    + ML+K + P+ V YT
Sbjct: 455 KFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYT 514

Query: 598 VLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEE 657
           ++I+         LA   + +M  +G  P+V+TY   +   C   R+D+A  +  +M++ 
Sbjct: 515 IVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKC 574

Query: 658 GILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
             + +   Y  LI+ + + G    A+ + K M      P++ T
Sbjct: 575 RTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFT 617



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 151/540 (27%), Positives = 254/540 (47%), Gaps = 22/540 (4%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + +   +++ L +F +M +    PD+     ++K L D G   +   + + M E G +P+
Sbjct: 209 FCEAGRIDEALELFREMTQ----PDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPT 264

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
              Y  ++D +C+E + +EA ++L EM   G  P  VT  +++  + R G +  A  +  
Sbjct: 265 TRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFE 324

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M   G + +  +YN I+ G+   G + +A+ L ++M   GV P + TYN+LI G C  G
Sbjct: 325 SMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDG 384

Query: 363 RVSDARHRFFEMLRKN-VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTY 421
            +  A  R   ++  N +  D  +YN L+   C++G + EA  LFD L  R + P  VT+
Sbjct: 385 HIGSA-FRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTF 443

Query: 422 NTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLR 481
           NT+I+GLC+ G  +VA    ENMI+ G  PD  TY+  +   CK         F +EML+
Sbjct: 444 NTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQ 503

Query: 482 KGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEE 541
           K ++P    YT  I       +   A R+  +M+++G  PD++TY   V   C  G L+E
Sbjct: 504 KDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDE 563

Query: 542 ANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY----- 596
           A  ++ +M     I D + Y ++I     +G   R   +  +M      P   T+     
Sbjct: 564 AENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLR 623

Query: 597 ---------TVLIHAHAARGRLELA--FMYFSEMQVKGIRPNVITYNALINGLCRLRRID 645
                     V + A +    +ELA  F  F  M+   +  +  TY +++ G    RR+D
Sbjct: 624 HLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLD 683

Query: 646 QAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +   L   M+EE +  N+  Y  L+N  C    + +A  L   M+     P+   +  LL
Sbjct: 684 EVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLL 743



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 134/471 (28%), Positives = 228/471 (48%), Gaps = 6/471 (1%)

Query: 199 MLRNGLLPDVKNCNRII-KVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEG 257
           M+R+G  PD    N +I    R     V A +++  M   G     V+Y  +++ FC+ G
Sbjct: 155 MVRSGWRPDAFTFNSLILGYCRTQQLEV-AHDLFCKMPFRGFSQDAVSYAALIEGFCEAG 213

Query: 258 EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYN 317
            + EALEL  EM      P+  T+  L+ G    G  E+   +++ M +LG + +  +Y 
Sbjct: 214 RIDEALELFREMT----QPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYA 269

Query: 318 PIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRK 377
            ++  +  +    EA  +  EM   G+ P + T  I++   C+ GR+S A   F  M  K
Sbjct: 270 ALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFK 329

Query: 378 NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
              P++ +YN ++ G+C +G + +A  L D++R   + P VVTYN LI G C  G +  A
Sbjct: 330 GCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSA 389

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
            +L   M   G+  D  TY ++++  CK G +  A   F+ +  +G++P+   + T I G
Sbjct: 390 FRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVING 449

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
             K G    A    E M++ G+ PD  TY+  +  LCK    +E    + +M+     P 
Sbjct: 450 LCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPS 509

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
            + YT +I+      +      ++  M+ +G SP +VTYT  + A+   GRL+ A    +
Sbjct: 510 TVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVT 569

Query: 618 EMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           EM+      + + YN LI+G   + + D+A  +   M     +PN +T+ I
Sbjct: 570 EMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFI 620



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 134/545 (24%), Positives = 228/545 (41%), Gaps = 51/545 (9%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+ ++ ++   E+   + N+M  +GL+P V  C  ++      G    A  V+  M   G
Sbjct: 271 LVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKG 330

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
            +P++ TYN ++  FC  G++ +A+ LL +M+  G  P+ VTYN+LI G   +G +  A 
Sbjct: 331 CEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAF 390

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            L+R M   GL    ++YN +I    + G + EA +L + +  RG+ P   T+N +I GL
Sbjct: 391 RLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGL 450

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
           CK G+   A      M+     PD  +Y+  +   C++    E     DE+  +++ P+ 
Sbjct: 451 CKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPST 510

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
           V Y  +I+ L    +  +A ++   M++QG  PDV+TYT  V   C  G L  A     E
Sbjct: 511 VNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTE 570

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEA------------------------------- 507
           M +     D  AY T I G   +G T  A                               
Sbjct: 571 MKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRL 630

Query: 508 --------------------YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLR 547
                               + L E M     P    TY  ++ G  +   L+E   L+ 
Sbjct: 631 AEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVS 690

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
            M  +    +   Y ++++   ++        L  +M+  G  P L+ Y  L+    A G
Sbjct: 691 LMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEG 750

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
           + + A   F   + K    + I +  +I+G  R    D  + +   +E+    P+  TY 
Sbjct: 751 QADRAKEIFRSSRWKEYNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQMKCKPSDETYA 810

Query: 668 ILINE 672
           +L  E
Sbjct: 811 MLTEE 815



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 127/532 (23%), Positives = 222/532 (41%), Gaps = 53/532 (9%)

Query: 158 ILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKV 217
           IL+ +   GL  CV      +++  Y ++  +   + VF  M   G  P+V   N I++ 
Sbjct: 287 ILNEMFDSGLMPCVVT--CTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQG 344

Query: 218 LRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPN 277
             + G   KA  +   M E G++P +VTYN ++   C +G +  A  LL  M+G G + +
Sbjct: 345 FCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAAD 404

Query: 278 GVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEE 337
             TYNVLI    + G++++A  L   +   G++ ++ ++N +I G  + G    A    E
Sbjct: 405 QYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLE 464

Query: 338 EMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG 397
            M++ G AP   TY+  I  LCK     +      EML+K+V P  ++Y  ++       
Sbjct: 465 NMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNER 524

Query: 398 NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYT 457
           N G A  ++ ++ S+   P VVTY T +   C  G L+ A+ +   M     + D + Y 
Sbjct: 525 NYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYN 584

Query: 458 IMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAY-------------------TTQIAGE 498
            +++G   +G    A      M      P+ F +                    T +   
Sbjct: 585 TLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKT 644

Query: 499 LKLGDTSEAYRLQEE--------------------------------MLAKGFPPDLITY 526
           ++L D  E + L ++                                M  +  P +   Y
Sbjct: 645 IELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIY 704

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           N LV+  CKL    +A  LL  M+G GF+P+ I Y  ++      G   R +++F +   
Sbjct: 705 NALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRW 764

Query: 587 KGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           K  +   + + V+I     +G  ++     S ++    +P+  TY  L   L
Sbjct: 765 KEYNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQMKCKPSDETYAMLTEEL 816


>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
          Length = 484

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 126/373 (33%), Positives = 204/373 (54%), Gaps = 11/373 (2%)

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           +L  G+   A  +N ++      G L  A N+ +EM+ RGV PT+ T+N L+ G+CK   
Sbjct: 105 LLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASD 164

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
           +++A      M +  + PD+ +Y   + G C++G I +A  +F+E+  R L P  V   T
Sbjct: 165 LNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTT 224

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           LID  C+ GD+    +L+  M  +G+  D++ Y  +VNG C++ ++  A +   EM + G
Sbjct: 225 LIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDG 284

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           L+PD+  YTT I G  K G+   A  +++EM  +G   D +TY  L+ GL K G   +A 
Sbjct: 285 LKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAE 344

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAH 603
            +L +M+  G  PD+ TYT +I A  + GD++ G      M  KG +P +VTY V+++  
Sbjct: 345 RILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGF 404

Query: 604 AARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE----EGI 659
            + G+++ A M  + M   G+ PN ITYN L++G C+       +G   D EE    +G+
Sbjct: 405 CSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCK-------HGKVRDTEELKSAKGM 457

Query: 660 LPNKYTYTILINE 672
           + +   YT LINE
Sbjct: 458 VSDFGVYTSLINE 470



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 137/428 (32%), Positives = 210/428 (49%), Gaps = 47/428 (10%)

Query: 307 LGLKVSAHSYN---PIICG----YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLC 359
           L L VSA S +   P++      Y+++GLL +  +L    + RG+   +  ++ L+    
Sbjct: 34  LPLLVSAASTDDPAPLVSAVAKVYADEGLLPDGCSLLLLALRRGIRVPMPAWSDLMN--- 90

Query: 360 KWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVV 419
           +   V +A   +  +L   V P+   +N L+    RSG +  A  +FDE+  R + PTVV
Sbjct: 91  RLPSVPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVV 150

Query: 420 TYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEM 479
           T+NTL+ G+C+  DL  A  L+  M   GI PDV TY   + G CK G +  A E F EM
Sbjct: 151 TFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEM 210

Query: 480 LRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
             +GL P+    TT I    K GD +    L+ EM  +G   DL+ YN LV+G C++  +
Sbjct: 211 CERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDM 270

Query: 540 EEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL------------------------- 574
           + AN+++ +M  DG  PD +TYT++I    + G+L                         
Sbjct: 271 KAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTAL 330

Query: 575 -----RRGRD-----LFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGI 624
                + GR      +   M+  GL P   TYT++I A    G ++  F +  EMQ KG 
Sbjct: 331 ISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGK 390

Query: 625 RPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQ--EA 682
            P ++TYN ++NG C L ++  A  L   M   G+ PN  TY IL++ +C  G  +  E 
Sbjct: 391 NPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTEE 450

Query: 683 LRLYKEML 690
           L+  K M+
Sbjct: 451 LKSAKGMV 458



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 132/415 (31%), Positives = 208/415 (50%), Gaps = 22/415 (5%)

Query: 203 GLLPDVKNCNRIIKVLRDNGFSV----------------KAREVYRMMGEFGIKPSIVTY 246
           GLLPD   C+ ++  LR  G  V                +A   Y  + + G+ P    +
Sbjct: 61  GLLPD--GCSLLLLALR-RGIRVPMPAWSDLMNRLPSVPEAYAFYLHLLDAGVPPEARQF 117

Query: 247 NTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLK 306
           N ++    + G++  A  +  EM  RG  P  VT+N L++G  +  +L  A  L   M K
Sbjct: 118 NMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAK 177

Query: 307 LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSD 366
            G+    ++Y   I G  + G + +A+ + EEM  RG+ P       LI   CK G V+ 
Sbjct: 178 AGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTA 237

Query: 367 ARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
                +EM  + V  D+++YN L+ G+CR  ++  A  + +E+R   L P  VTY TLID
Sbjct: 238 GLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLID 297

Query: 427 GLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQP 486
           G C+ G+L+ A ++K+ M ++G+  D +TYT +++G  K G    A     EM+  GLQP
Sbjct: 298 GCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQP 357

Query: 487 DRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
           D   YT  I    K GD    ++  +EM  KG  P ++TYNV+++G C LG ++ A+ LL
Sbjct: 358 DNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLL 417

Query: 547 RKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIH 601
             M+  G  P+ ITY  ++    + G +R   +L +    KG+      YT LI+
Sbjct: 418 NAMLNIGVCPNDITYNILLDGHCKHGKVRDTEELKS---AKGMVSDFGVYTSLIN 469



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 179/368 (48%), Gaps = 3/368 (0%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           +L  G+ P+ +  N +++ +  +G    AR V+  M   G++P++VT+NT++   CK  +
Sbjct: 105 LLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASD 164

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           +  A  L   M   G +P+  TY   I G  + G ++ A  +  +M + GL  +      
Sbjct: 165 LNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTT 224

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           +I  + ++G +   L L  EM TRGV   L  YN L+ G C+   +  A     EM +  
Sbjct: 225 LIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDG 284

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
           + PD ++Y TL+ G C+ G +  A  +  E+    +    VTY  LI GL + G    A+
Sbjct: 285 LKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAE 344

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
           ++   M+  G+ PD  TYT++++  CK G++    +   EM  KG  P    Y   + G 
Sbjct: 345 RILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGF 404

Query: 499 LKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDH 558
             LG    A  L   ML  G  P+ ITYN+L+ G CK G + +  EL       G + D 
Sbjct: 405 CSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTEELKS---AKGMVSDF 461

Query: 559 ITYTSIIH 566
             YTS+I+
Sbjct: 462 GVYTSLIN 469



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 109/401 (27%), Positives = 182/401 (45%), Gaps = 54/401 (13%)

Query: 96  VLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNM 155
           ++NR+   P     +   ++   GV  +   F  ++  +I SG L SA            
Sbjct: 88  LMNRLPSVPEAYAFYLHLLDA--GVPPEARQFNMLMRDMIRSGKLASA------------ 133

Query: 156 HGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRII 215
             + D ++  G+    ++   + L+    K S +     +   M + G+ PDV      I
Sbjct: 134 RNVFDEMLRRGVQP--TVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFI 191

Query: 216 KVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCS 275
           + L   G    A E++  M E G+ P+ V   T++D+ CKEG++   LEL WEM  RG  
Sbjct: 192 QGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVK 251

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
            + V YN L+ GF R  +++ A  ++ +M K GLK    +Y  +I G  ++G L  A+ +
Sbjct: 252 ADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEM 311

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD------------- 382
           ++EM   GVA    TY  LI GL K GR  DA     EM+   + PD             
Sbjct: 312 KQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCK 371

Query: 383 ----------------------IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
                                 I++YN ++ G+C  G +  A +L + + +  + P  +T
Sbjct: 372 NGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDIT 431

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVN 461
           YN L+DG C++G +   ++LK     +G++ D   YT ++N
Sbjct: 432 YNILLDGHCKHGKVRDTEELKS---AKGMVSDFGVYTSLIN 469


>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
 gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
          Length = 715

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 142/479 (29%), Positives = 229/479 (47%), Gaps = 36/479 (7%)

Query: 282 NVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVT 341
           + ++  F+  G+ ++A  ++ +M   GL ++  + N +     E GL+  A N+ +EM  
Sbjct: 165 DCMVRVFAEIGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRV 224

Query: 342 RGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVI--------------------- 380
           RGV P   +Y ++    C+ GR+SD      +M+R+  +                     
Sbjct: 225 RGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASR 284

Query: 381 --------------PDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLID 426
                         P++I++ +L+ G C+ G+I +AF + +E+  +   P V T+  LID
Sbjct: 285 VFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALID 344

Query: 427 GLCRYGDLEVAQQLKENMI-NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
           GLC+ G  E A +L   ++ +    P+V TYT M++G CK   L+ A    + M  +GL 
Sbjct: 345 GLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLV 404

Query: 486 PDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANEL 545
           P+   YT  I G  K G+  +AY L + M  +GF  ++ TYN  +  LCK G   EA +L
Sbjct: 405 PNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKL 464

Query: 546 LRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
           L+K    G   D +TYT +I       D R     F+ M + G+ P + TY  LI A + 
Sbjct: 465 LKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSR 524

Query: 606 RGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYT 665
           + R+E +   F+E    G+ P   TY ++I G CR R +  A   F  M + G  P+  T
Sbjct: 525 QRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLT 584

Query: 666 YTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESL 724
           Y  LI+  C      EA +LY+ M+D+ + P   T   L  +   +D    A+  LE L
Sbjct: 585 YGALISGLCKESKLDEACQLYEAMVDKGLSPCEVTRLTLAYEYCKQDDSATAMVILERL 643



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 131/515 (25%), Positives = 233/515 (45%), Gaps = 41/515 (7%)

Query: 174 KILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRM 233
           +++D ++ ++ +    ++ + +  +M  +GL+  V+  N +  V  + G    A  V+  
Sbjct: 162 EVMDCMVRVFAEIGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDE 221

Query: 234 MGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
           M   G+ P  V+Y  M  ++C+ G + +    L +M  RG   +  T  ++I+ F   G 
Sbjct: 222 MRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGF 281

Query: 294 LEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNI 353
             +        ++LGLK +  ++  +I G  ++G + +A  + EEMV +G  P + T+  
Sbjct: 282 ASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTA 341

Query: 354 LIYGLCKWGRVSDARHRFFEMLRKN-VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
           LI GLCK G    A   F +++R +   P++ +Y ++++GYC+   +  A +L   ++ +
Sbjct: 342 LIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQ 401

Query: 413 NLVPT-----------------------------------VVTYNTLIDGLCRYGDLEVA 437
            LVP                                    + TYN  ID LC+ G    A
Sbjct: 402 GLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEA 461

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAG 497
            +L +     G+  D +TYTI+++  C+  +   A  FF++M + G+QPD   Y T IA 
Sbjct: 462 CKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAA 521

Query: 498 ELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPD 557
             +     E+ +L  E +  G  P   TY  ++ G C+  ++  A +   +M   G  PD
Sbjct: 522 FSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPD 581

Query: 558 HITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFS 617
            +TY ++I    +   L     L+  M+ KGLSP  VT   L + +  +     A +   
Sbjct: 582 SLTYGALISGLCKESKLDEACQLYEAMVDKGLSPCEVTRLTLAYEYCKQDDSATAMVILE 641

Query: 618 EMQVK-GIRPNVITYNALINGLCRLRRIDQAYGLF 651
            +  K  IR    T N LI  LC  R++  A   F
Sbjct: 642 RLDKKLWIR----TVNTLIRKLCSERKVGMAVLFF 672



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/387 (29%), Positives = 186/387 (48%), Gaps = 4/387 (1%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY-RMMGEFGIKPSI 243
           K+  ++Q   +  +M++ G  P+V     +I  L   G++ KA  ++ +++     KP++
Sbjct: 313 KRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNV 372

Query: 244 VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
            TY +M+  +CKE ++  A  LL  M+ +G  PN  TY  LI G S+ G  E+A  L+  
Sbjct: 373 HTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDL 432

Query: 304 MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
           M K G   +  +YN  I    +KG  +EA  L ++    G+     TY ILI  LC+   
Sbjct: 433 MGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISELCRRAD 492

Query: 364 VSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNT 423
             +A   F +M +  V PD+ +YNTL+  + R   + E+  LF E     LVPT  TY +
Sbjct: 493 TREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTS 552

Query: 424 LIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKG 483
           +I G CR  ++ +A +    M + G  PD +TY  +++G CK   L  A + +  M+ KG
Sbjct: 553 MICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKG 612

Query: 484 LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEAN 543
           L P      T      K  D++ A  + E +  K +   + T N L+  LC    +  A 
Sbjct: 613 LSPCEVTRLTLAYEYCKQDDSATAMVILERLDKKLW---IRTVNTLIRKLCSERKVGMAV 669

Query: 544 ELLRKMVGDGFIPDHITYTSIIHASLE 570
               K++      D +T T+   A  E
Sbjct: 670 LFFHKLLDKDQNVDRVTLTAFTTACYE 696



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/189 (22%), Positives = 73/189 (38%), Gaps = 35/189 (18%)

Query: 552 DGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLEL 611
           + F   H     ++    E+G  +   ++   M   GL  T+ T   +       G +  
Sbjct: 155 ENFERAHEVMDCMVRVFAEIGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGY 214

Query: 612 AFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM----------------- 654
           A   F EM+V+G+ P+ ++Y  +    CR+ RI        DM                 
Sbjct: 215 AENVFDEMRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMIS 274

Query: 655 ------------------EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
                              E G+ PN   +T LIN  C  G+ ++A  + +EM+ +  +P
Sbjct: 275 TFCEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKP 334

Query: 697 DYCTHSALL 705
           +  TH+AL+
Sbjct: 335 NVYTHTALI 343


>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
          Length = 333

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 118/327 (36%), Positives = 185/327 (56%)

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
           +R+M   GL      Y  +I G+   GL+ +AL + +EMV  G  P + TYN L+ GLCK
Sbjct: 4   LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVT 420
             R+ DA     EM  + V PD+ ++ TL++GYC  G + +A  LFD + ++ L P +VT
Sbjct: 64  ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123

Query: 421 YNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEML 480
           YNTLIDG+CR GDL+ A  L ++M ++ I P+ +TY+I+++  C+ G +  A  F +EM+
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 183

Query: 481 RKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLE 540
            KG+ P+   Y + I G  + G+ S+  +  ++M+     PDLITYN L+HG  K   + 
Sbjct: 184 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 243

Query: 541 EANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLI 600
           +A +LL  M  +   PD +TY  +I+     G+++    +F  M  KG+ P   TY  +I
Sbjct: 244 DAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMI 303

Query: 601 HAHAARGRLELAFMYFSEMQVKGIRPN 627
           + H   G  + AF    EM  +G  P+
Sbjct: 304 NGHVTAGNSKEAFQLHDEMLQRGFAPD 330



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 117/326 (35%), Positives = 187/326 (57%)

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
           L EM+  G  P+GV Y ++I GF R G +  A  +  +M+  G      +YN ++ G  +
Sbjct: 4   LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63

Query: 326 KGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS 385
           +  L++A  L  EM  RGV P L T+  LI+G C  G++  A   F  ML + + PDI++
Sbjct: 64  ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123

Query: 386 YNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
           YNTL+ G CR G++ +A  L+D++ SR + P  VTY+ LID  C  G +E A    + MI
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 183

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
           N+GILP+++TY  ++ G C+ GN+S  ++F  +M+   + PD   Y T I G +K     
Sbjct: 184 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 243

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           +A++L   M  +   PD++TYN+L++G    G+++EA  +  KM   G  PD  TY S+I
Sbjct: 244 DAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMI 303

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSP 591
           +  +  G+ +    L + ML++G +P
Sbjct: 304 NGHVTAGNSKEAFQLHDEMLQRGFAP 329



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 115/325 (35%), Positives = 189/325 (58%)

Query: 373 EMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYG 432
           EM    ++PD + Y  ++ G+CR+G + +A  + DE+     +P VVTYNTL++GLC+  
Sbjct: 6   EMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKER 65

Query: 433 DLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYT 492
            L  A+ L   M  +G+ PD+ T+T +++G C  G L  A + F+ ML + L+PD   Y 
Sbjct: 66  RLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYN 125

Query: 493 TQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGD 552
           T I G  + GD  +A  L ++M ++   P+ +TY++L+   C+ G +E+A   L +M+  
Sbjct: 126 TLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINK 185

Query: 553 GFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELA 612
           G +P+ +TY SII      G++ +G+     M+   +SP L+TY  LIH +    ++  A
Sbjct: 186 GILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDA 245

Query: 613 FMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINE 672
           F   + M+ + ++P+V+TYN LING      + +A  +F  M  +GI P++YTY  +IN 
Sbjct: 246 FKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMING 305

Query: 673 NCNAGNWQEALRLYKEMLDREIEPD 697
           +  AGN +EA +L+ EML R   PD
Sbjct: 306 HVTAGNSKEAFQLHDEMLQRGFAPD 330



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 116/320 (36%), Positives = 181/320 (56%)

Query: 203 GLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEA 262
           GL+PD      +I      G    A  V   M   G  P +VTYNT+L+  CKE  + +A
Sbjct: 11  GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA 70

Query: 263 LELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICG 322
             LL EM+ RG  P+  T+  LI G+   G+L++A  L   ML   L+    +YN +I G
Sbjct: 71  EGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDG 130

Query: 323 YSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPD 382
              +G L +A +L ++M +R + P   TY+ILI   C+ G+V DA     EM+ K ++P+
Sbjct: 131 MCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPN 190

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKE 442
           I++YN+++ GYCRSGN+ +      ++    + P ++TYNTLI G  +   +  A +L  
Sbjct: 191 IMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLN 250

Query: 443 NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLG 502
            M  + + PDV+TY +++NG    GN+  A   F +M  KG++PDR+ Y + I G +  G
Sbjct: 251 MMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAG 310

Query: 503 DTSEAYRLQEEMLAKGFPPD 522
           ++ EA++L +EML +GF PD
Sbjct: 311 NSKEAFQLHDEMLQRGFAPD 330



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 109/326 (33%), Positives = 182/326 (55%)

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRN 291
           R M  FG+ P  V Y  ++  FC+ G M +AL +  EM G GC P+ VTYN L+ G  + 
Sbjct: 5   REMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKE 64

Query: 292 GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATY 351
             L  A GL+ +M + G+     ++  +I GY  +G L +AL L + M+ + + P + TY
Sbjct: 65  RRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTY 124

Query: 352 NILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRS 411
           N LI G+C+ G +  A   + +M  + + P+ ++Y+ L+  +C  G + +AF   DE+ +
Sbjct: 125 NTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMIN 184

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
           + ++P ++TYN++I G CR G++   Q+  + M+   + PD+ITY  +++G  K   +  
Sbjct: 185 KGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHD 244

Query: 472 AREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVH 531
           A +  N M ++ +QPD   Y   I G    G+  EA  + E+M AKG  PD  TY  +++
Sbjct: 245 AFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMIN 304

Query: 532 GLCKLGSLEEANELLRKMVGDGFIPD 557
           G    G+ +EA +L  +M+  GF PD
Sbjct: 305 GHVTAGNSKEAFQLHDEMLQRGFAPD 330



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 103/305 (33%), Positives = 169/305 (55%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + +  ++   L V ++M+  G LPDV   N ++  L      + A  +   M E G+ P 
Sbjct: 26  FCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPD 85

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           + T+ T++  +C EG++ +AL+L   M  +   P+ VTYN LI G  R G+L++A  L  
Sbjct: 86  LCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWD 145

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           DM    +  +  +Y+ +I  + EKG + +A    +EM+ +G+ P + TYN +I G C+ G
Sbjct: 146 DMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSG 205

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            VS  +    +M+   V PD+I+YNTL++GY +   + +AF L + +    + P VVTYN
Sbjct: 206 NVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYN 265

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            LI+G   +G+++ A  + E M  +GI PD  TY  M+NG    GN   A +  +EML++
Sbjct: 266 MLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQR 325

Query: 483 GLQPD 487
           G  PD
Sbjct: 326 GFAPD 330



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 86/242 (35%), Positives = 135/242 (55%), Gaps = 1/242 (0%)

Query: 475 FFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLC 534
           +  EM   GL PD   YT  I G  + G  S+A R+++EM+  G  PD++TYN L++GLC
Sbjct: 3   YLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLC 62

Query: 535 KLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLV 594
           K   L +A  LL +M   G  PD  T+T++IH     G L +   LF+ ML + L P +V
Sbjct: 63  KERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIV 122

Query: 595 TYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDM 654
           TY  LI     +G L+ A   + +M  + I PN +TY+ LI+  C   +++ A+G   +M
Sbjct: 123 TYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEM 182

Query: 655 EEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYK 714
             +GILPN  TY  +I   C +GN  +  +  ++M+  ++ PD  T++ L+   + +D K
Sbjct: 183 INKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKED-K 241

Query: 715 VH 716
           +H
Sbjct: 242 MH 243



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 93/169 (55%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +L+  + +K  VE      ++M+  G+LP++   N IIK    +G   K ++  + M   
Sbjct: 161 ILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVN 220

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
            + P ++TYNT++  + KE +M +A +LL  M+     P+ VTYN+LI GFS +G +++A
Sbjct: 221 KVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEA 280

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
             +   M   G++   ++Y  +I G+   G   EA  L +EM+ RG AP
Sbjct: 281 GWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAP 329


>gi|254939549|ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays]
 gi|218684531|gb|ACL01094.1| chloroplast pentatricopeptide repeat protein 10 [Zea mays]
 gi|223948163|gb|ACN28165.1| unknown [Zea mays]
 gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10 [Zea mays]
          Length = 786

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 176/708 (24%), Positives = 304/708 (42%), Gaps = 57/708 (8%)

Query: 30  FCFSVHTYPSISE--SNNKDSVLNPESESYYKELIISTVEEKPWAFCNNRWVSDHFQAVV 87
              S H  P+++   ++ +D +L  +  S  K L +S   E  WA    RW      A  
Sbjct: 81  LAISSHPLPTLAAFLASRRDELLRADITSLLKALELSGHWE--WALALLRWAGKEGAADA 138

Query: 88  SDPELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVV 147
           S  E++VR L R  +   +           PG + D   + T+L  L  +G    A   +
Sbjct: 139 SALEMVVRALGREGQHDAVCA-LLDETPLPPGSRLDVRAYTTVLHALSRAGRYERA---L 194

Query: 148 ETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMV-EQCLLVFNKMLRNGLLP 206
           E    +   G+   L+             +++L +Y +      + + + ++M   G+ P
Sbjct: 195 ELFAELRRQGVAPTLV-----------TYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEP 243

Query: 207 DVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELL 266
           D    + +I     +G   +A   +  +   G  P +VTYN +L  F K G   EAL +L
Sbjct: 244 DGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVL 303

Query: 267 WEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEK 326
            EM+  GC P+ VTYN L   ++R G  E+A   +  M   GL  +A +YN ++  Y   
Sbjct: 304 GEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGNV 363

Query: 327 GLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIIS- 385
           G + EAL L ++M   G  P + TYN+++  L K  R +       EM R    P+ ++ 
Sbjct: 364 GKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTW 423

Query: 386 ----------------------------------YNTLLYGYCRSGNIGEAFLLFDELRS 411
                                             YNTL+  Y R G+   AF +++E+ S
Sbjct: 424 NTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTS 483

Query: 412 RNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSM 471
               P + TYN L++ L R GD   AQ +   M  +G  P+  +Y++++    K GN++ 
Sbjct: 484 AGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAG 543

Query: 472 AREFFNEMLRKG-LQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLV 530
                NE+   G + P      T +    K           +E+ A+G+ PDL+ +N ++
Sbjct: 544 IAAIENEVYGSGAVFPSWVILRTLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSML 603

Query: 531 HGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNM-LRKGL 589
               K G   +A E+   +   G  PD ITY S++    +  +      + N +   + +
Sbjct: 604 SIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQTM 663

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYG 649
            P +V+Y  +I+    +G ++ A    SEM   G+ P  +TY+ L+ G   L    +A  
Sbjct: 664 KPDVVSYNTVINGFCKQGLVKEAQRVLSEMVADGMAPCAVTYHTLVGGYSSLEMFSEARE 723

Query: 650 LFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPD 697
           +   M + G+ P + TY  ++   C A  ++EA     E+ + +++ D
Sbjct: 724 VIGYMVQHGLKPMELTYRRVVESYCRAKRFEEARGFLSEVSETDLDFD 771



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 150/624 (24%), Positives = 267/624 (42%), Gaps = 51/624 (8%)

Query: 121 KRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLL 180
           +RDE +   I  +L    L  S +W             L +L   G         L++++
Sbjct: 98  RRDELLRADITSLL--KALELSGHW----------EWALALLRWAGKEGAADASALEMVV 145

Query: 181 LIYTKKSMVEQ-CLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGI 239
               ++   +  C L+    L  G   DV+    ++  L   G   +A E++  +   G+
Sbjct: 146 RALGREGQHDAVCALLDETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGV 205

Query: 240 KPSIVTYNTMLDSFCKEG-EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
            P++VTYN +LD + + G      + LL EM+  G  P+G T + +I    R+G +++A 
Sbjct: 206 APTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDGFTASTVIAACCRDGLVDEAV 265

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
               D+   G      +YN ++  + + G   EAL +  EM   G  P   TYN L    
Sbjct: 266 AFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTY 325

Query: 359 CKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTV 418
            + G   +A      M  K ++P+  +YNT++  Y   G + EA  LFD+++    VP V
Sbjct: 326 ARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNV 385

Query: 419 VTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNE 478
            TYN ++  L +     V  ++   M   G  P+ +T+  M+    K G           
Sbjct: 386 NTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEG 445

Query: 479 MLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGS 538
           M   G++  R  Y T IA   + G  + A+++  EM + GF P + TYN L++ L + G 
Sbjct: 446 MRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGD 505

Query: 539 LEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDL------------------------ 574
              A  ++ KM   GF P+  +Y+ ++    + G++                        
Sbjct: 506 WSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILR 565

Query: 575 ---------RRGRDL---FNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
                    RR   +   F  +  +G +P LV +  ++  +A  G    A   F  ++  
Sbjct: 566 TLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRS 625

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDME-EEGILPNKYTYTILINENCNAGNWQE 681
           G+ P++ITYN+L++   +     +A  +   ++  + + P+  +Y  +IN  C  G  +E
Sbjct: 626 GLSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKE 685

Query: 682 ALRLYKEMLDREIEPDYCTHSALL 705
           A R+  EM+   + P   T+  L+
Sbjct: 686 AQRVLSEMVADGMAPCAVTYHTLV 709



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 178/395 (45%), Gaps = 2/395 (0%)

Query: 335 LEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC 394
           L+E  +  G    +  Y  +++ L + GR   A   F E+ R+ V P +++YN +L  Y 
Sbjct: 161 LDETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYG 220

Query: 395 RSGNIGEAFL-LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
           R G      + L DE+R+  + P   T +T+I   CR G ++ A    E++  +G  P V
Sbjct: 221 RMGRSWPRIVALLDEMRAAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCV 280

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
           +TY  ++    K GN + A     EM + G QPD   Y        + G   EA R  + 
Sbjct: 281 VTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDT 340

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           M +KG  P+  TYN ++     +G ++EA  L  +M   GF+P+  TY  ++    +   
Sbjct: 341 MASKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSR 400

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNA 633
                ++   M R G +P  VT+  ++     RG  +        M+  G+  +  TYN 
Sbjct: 401 FTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNT 460

Query: 634 LINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDRE 693
           LI    R      A+ ++ +M   G  P   TY  L+N     G+W  A  +  +M  + 
Sbjct: 461 LIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKG 520

Query: 694 IEPDYCTHSALLLKQLDKDYKVHAVEYLESLTLGA 728
            +P+  ++S LLL+   K   V  +  +E+   G+
Sbjct: 521 FKPNEQSYS-LLLQCYAKGGNVAGIAAIENEVYGS 554



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 86/365 (23%), Positives = 160/365 (43%), Gaps = 46/365 (12%)

Query: 168 SSCVSIKIL-DLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
           S C   ++  + +L +  K+ M +    V   M   G+       N +I      G    
Sbjct: 414 SGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTN 473

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A ++Y  M   G  P I TYN +L+   ++G+   A  ++ +M+ +G  PN  +Y++L+ 
Sbjct: 474 AFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQ 533

Query: 287 GFSRNGELEQARGLIRDMLKLGL-----------------------------KVSAHSYN 317
            +++ G +     +  ++   G                              +V A  YN
Sbjct: 534 CYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFKCRRLDGMETAFQEVKARGYN 593

Query: 318 P-------IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHR 370
           P       ++  Y++ G+  +A  + + +   G++P L TYN L+    K     +A  +
Sbjct: 594 PDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEA-EK 652

Query: 371 FFEMLR--KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               L+  + + PD++SYNT++ G+C+ G + EA  +  E+ +  + P  VTY+TL+ G 
Sbjct: 653 ILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVADGMAPCAVTYHTLVGG- 711

Query: 429 CRYGDLEVAQQLKE---NMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQ 485
             Y  LE+  + +E    M+  G+ P  +TY  +V   C+      AR F +E+    L 
Sbjct: 712 --YSSLEMFSEAREVIGYMVQHGLKPMELTYRRVVESYCRAKRFEEARGFLSEVSETDLD 769

Query: 486 PDRFA 490
            D+ A
Sbjct: 770 FDKKA 774


>gi|147797511|emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera]
          Length = 814

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 177/672 (26%), Positives = 300/672 (44%), Gaps = 72/672 (10%)

Query: 105 RIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIG 164
           +IA RFF W   Q G   + + +  +   L  S   ++A   + ++  VN    +     
Sbjct: 109 KIAYRFFNWASDQGGFNHNCYTYNAMASCL--SHARQNAPLSLLSMDIVNSRCAMSPGAL 166

Query: 165 GGLSSCVSIKILDL-------------------LLLIYTKKSMVEQCLLVFNKMLRNGLL 205
           G +S   SI ++++                   +L  Y      ++ L VFN++   G +
Sbjct: 167 GAISKSGSIDLVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWV 226

Query: 206 PDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALEL 265
            D    + ++      G   KA E+   M + GI+ +  T+  ++  F ++  + +AL+L
Sbjct: 227 -DGHVLSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQL 285

Query: 266 LWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSE 325
             +MQ  G +P+   Y+ LI G     E+E+A  L+ +M +LG+       + +I   SE
Sbjct: 286 FKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIPYCSE 345

Query: 326 K------------GLLVEAL----------------------------------NLEEE- 338
           +             L  EA+                                  N E   
Sbjct: 346 EVDIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLXAMTGDNYTDNFEVNK 405

Query: 339 --MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRS 396
             MV   V P   +++I+I GLC  G++  A   F +M+R     +++ YN L+     S
Sbjct: 406 FFMVKEMVRPXTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNS 465

Query: 397 GNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITY 456
             + E +LL  E++     PT  T+N++   LCR  D+  A  +   M   G  P +  Y
Sbjct: 466 NRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHY 525

Query: 457 TIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLA 516
           T++V   CK    + A  F  EM+R+G  PD  AY+  I G +K+    +A  +  ++ A
Sbjct: 526 TLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICA 585

Query: 517 KGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRR 576
           +G+ PD++ YN L++G CK+  + EA+++L +MV  G +P  +TY  +I    + GD+ +
Sbjct: 586 RGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQ 645

Query: 577 GRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALIN 636
                + M+ K   P ++TYT LI      GR + A   ++EM+ KG  PN I++ ALI+
Sbjct: 646 AFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIH 705

Query: 637 GLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEP 696
           GLC+    D A   F +M E    P+   Y  LI    +  N   A  + KEM+ +   P
Sbjct: 706 GLCKCGWPDAALLYFREMGERET-PDTIVYVALITSFISNKNPTLAFEILKEMVAKGKFP 764

Query: 697 DYCTHSALLLKQ 708
           D    + L L+ 
Sbjct: 765 DPLDKNDLPLRD 776



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 185/402 (46%), Gaps = 36/402 (8%)

Query: 199 MLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGE 258
           M++  + P   + + +I  L + G    A  ++R M   G K +++ YN ++D       
Sbjct: 408 MVKEMVRPXTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNR 467

Query: 259 MQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNP 318
           ++E   LL EM+G G  P   T+N +     R  ++  A  ++R+M   G +     Y  
Sbjct: 468 LEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTL 527

Query: 319 IICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKN 378
           ++    ++    EA N   EMV  G  P +  Y+  I G  K   V  A   F ++  + 
Sbjct: 528 LVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARG 587

Query: 379 VIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQ 438
             PD+++YNTL+ G+C+   + EA  + DE+ ++ LVP+VVTYN LIDG C+ GD++ A 
Sbjct: 588 YCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAF 647

Query: 439 QLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGE 498
                M+ +   P+VITYT +++G C  G    A   +NEM  KG  P+R ++   I G 
Sbjct: 648 HCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGL 707

Query: 499 LKLG----------------------------------DTSEAYRLQEEMLAKGFPPDLI 524
            K G                                  + + A+ + +EM+AKG  PD +
Sbjct: 708 CKCGWPDAALLYFREMGERETPDTIVYVALITSFISNKNPTLAFEILKEMVAKGKFPDPL 767

Query: 525 TYN--VLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
             N   L   + +L      +  ++ ++ +G IP  +  + +
Sbjct: 768 DKNDLPLRDAILELAEDASTSSNVKNLIAEGRIPTIVCLSDV 809



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 133/550 (24%), Positives = 225/550 (40%), Gaps = 60/550 (10%)

Query: 180 LLIYTKKSMVEQCLLVFNKMLRNGLLPDVKN---------CNRIIKVLRDNGFSVKAREV 230
           L  YT+KS+  Q L  F++ LR        +          N +I +     F+   +E 
Sbjct: 27  LFFYTQKSLFTQNLSTFSQFLRLICTKSSASFSSPHGAHITNALISIFTKQPFNPDNQE- 85

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELL-WEMQGRGCSPNGVTYNVLITGFS 289
              +  FG   S++T+  + +        + A     W     G + N  TYN + +  S
Sbjct: 86  ---LRNFG---SMLTHEVVENVLSGLKSWKIAYRFFNWASDQGGFNHNCYTYNAMASCLS 139

Query: 290 ---RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLE-EEMVTRGVA 345
              +N  L         +L + +  S  + +P   G   K   ++ + +  +EM   G  
Sbjct: 140 HARQNAPLS--------LLSMDIVNSRCAMSPGALGAISKSGSIDLVEMRLKEMCDSGWE 191

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEML-RKNVIPDIISYNTLLYGYCRSGNIGEAFL 404
           P   T   ++   C   +   A   F E+  R  V   ++S   L +  C  G + +AF 
Sbjct: 192 PDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWVDGHVLSILVLTFSKC--GEVDKAFE 249

Query: 405 LFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSC 464
           L + +    +     T+  LI G  R   ++ A QL + M   G  PDV  Y  ++ G C
Sbjct: 250 LIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLC 309

Query: 465 KMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGEL--KLGDTSEAYRLQEEMLAK-GFPP 521
               +  A    +EM   G+ PD      QI  +L     +  + YRL EE L       
Sbjct: 310 AKKEIEKALHLLSEMKELGIDPD-----IQILSKLIPYCSEEVDIYRLIEERLEDLDTEA 364

Query: 522 DLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLF 581
            L+ YN +++GL    S+++A  LL  M GD +  D+                       
Sbjct: 365 MLLLYNSVLNGLVNGKSVDKAYYLLXAMTGDNYT-DNFEVNKFF---------------- 407

Query: 582 NNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRL 641
             M+++ + P   +++++I      G+L+LA   F +M   G + NV+ YN LI+ L   
Sbjct: 408 --MVKEMVRPXTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNS 465

Query: 642 RRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
            R+++ Y L  +M+  G  P ++T+  +    C   +   AL + +EM     EP +  H
Sbjct: 466 NRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEP-WIKH 524

Query: 702 SALLLKQLDK 711
             LL+KQL K
Sbjct: 525 YTLLVKQLCK 534


>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
 gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
          Length = 454

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 129/432 (29%), Positives = 226/432 (52%), Gaps = 4/432 (0%)

Query: 185 KKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIV 244
           K+  V++  + +++ML   + PD    N II  L       +A EV  +M    + P+  
Sbjct: 23  KEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEVLTVM----VMPNCF 78

Query: 245 TYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDM 304
           TYN+++  +C  G+ ++A+ +  +M   G  P+ VTYN L+    +NG+  +AR +   M
Sbjct: 79  TYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSM 138

Query: 305 LKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRV 364
           +K GLK    +Y  ++ GY+ KG LVE  +L   MV  G+      +NILI    K  +V
Sbjct: 139 VKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKV 198

Query: 365 SDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTL 424
            +    F +M ++ + P+ ++Y T++ G C+ G + +A L F+++  + L P VV Y +L
Sbjct: 199 DEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSL 258

Query: 425 IDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGL 484
           I  LC Y   E A++L   +++QGI P+++ +  +++  CK G +  +++ F+ +   G+
Sbjct: 259 IHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGV 318

Query: 485 QPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANE 544
            PD   Y+T I G    G    A +L   M++ G  PD +TY+ L++G CK+  +E+A  
Sbjct: 319 NPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALA 378

Query: 545 LLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHA 604
           L ++M  +G  PD ITY  I+H           ++L+  +   G    L TY +++   A
Sbjct: 379 LFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIILMDFA 438

Query: 605 ARGRLELAFMYF 616
               L + F  F
Sbjct: 439 KTNSLMMHFGCF 450



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 129/446 (28%), Positives = 223/446 (50%), Gaps = 39/446 (8%)

Query: 241 PSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGL 300
           P +V+YNT++D   KEG++ +A     EM  R  SP+ VTYN +I   S+   +++A   
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAM-- 66

Query: 301 IRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCK 360
             ++L + +  +  +YN I+ GY   G   +A+ +  +M + G+ P + TYN L+  LCK
Sbjct: 67  --EVLTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCK 124

Query: 361 WGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSG----------------------- 397
            G+ ++AR  F  M+++ + PDI +Y TLL+GY   G                       
Sbjct: 125 NGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHV 184

Query: 398 ------------NIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMI 445
                        + E  L+F ++R + L P  V Y T+IDGLC+ G L+ A    E MI
Sbjct: 185 FNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMI 244

Query: 446 NQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTS 505
           ++G+ P+V+ YT +++  C       A E   E+L +G+ P+   + T +    K G   
Sbjct: 245 DKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVI 304

Query: 506 EAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSII 565
           E+ +L + +   G  PD+ITY+ L+ G C  G ++ A +LL  MV  G  PD +TY+++I
Sbjct: 305 ESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLI 364

Query: 566 HASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIR 625
           +   ++  +     LF  M   G++P ++TY +++H      R   A   ++ +   G +
Sbjct: 365 NGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQ 424

Query: 626 PNVITYNALINGLCRLRRIDQAYGLF 651
             + TYN ++    +   +   +G F
Sbjct: 425 LELSTYNIILMDFAKTNSLMMHFGCF 450



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 209/391 (53%), Gaps = 4/391 (1%)

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           SYN II G  ++G + +A     EM+ R V+P   TYN +I  L K    + A  R  E+
Sbjct: 13  SYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSK----AQAMDRAMEV 68

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
           L   V+P+  +YN++++GYC SG   +A  +F ++ S  + P VVTYN+L+D LC+ G  
Sbjct: 69  LTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKC 128

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
             A+++ ++M+ +G+ PD+ TY  +++G    G L    +    M++ G+Q D   +   
Sbjct: 129 TEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNIL 188

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I    K     E   +  +M  +G  P+ + Y  ++ GLCKLG L++A     +M+  G 
Sbjct: 189 ICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGL 248

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            P+ + YTS+IHA        +  +L   +L +G++P +V +  ++ +    GR+  +  
Sbjct: 249 TPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKK 308

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            F  +   G+ P+VITY+ LI+G C   ++D A  L   M   G+ P+  TY+ LIN  C
Sbjct: 309 LFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYC 368

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
                ++AL L+KEM    + PD  T++ +L
Sbjct: 369 KINRMEDALALFKEMESNGVNPDIITYNIIL 399



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 127/437 (29%), Positives = 228/437 (52%), Gaps = 5/437 (1%)

Query: 270 QGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLL 329
            GR C P+ V+YN +I G  + G++++A     +ML   +   A +YN II   S+    
Sbjct: 4   DGR-CPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSK---- 58

Query: 330 VEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTL 389
            +A++   E++T  V P   TYN +++G C  G+   A   F +M    + PD+++YN+L
Sbjct: 59  AQAMDRAMEVLTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSL 118

Query: 390 LYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGI 449
           +   C++G   EA  +FD +  R L P + TY TL+ G    G L     L   M+  G+
Sbjct: 119 MDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGM 178

Query: 450 LPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR 509
             D   + I++    K   +      F++M ++GL P+   Y T I G  KLG   +A  
Sbjct: 179 QLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAML 238

Query: 510 LQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASL 569
             E+M+ KG  P+++ Y  L+H LC     E+A EL+ +++  G  P+ + + +I+ +  
Sbjct: 239 NFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLC 298

Query: 570 EMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVI 629
           + G +   + LF+ +   G++P ++TY+ LI  +   G+++ A    + M   G++P+ +
Sbjct: 299 KEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSV 358

Query: 630 TYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEM 689
           TY+ LING C++ R++ A  LF +ME  G+ P+  TY I+++          A  LY  +
Sbjct: 359 TYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARI 418

Query: 690 LDREIEPDYCTHSALLL 706
            +   + +  T++ +L+
Sbjct: 419 TESGTQLELSTYNIILM 435



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 130/443 (29%), Positives = 232/443 (52%), Gaps = 18/443 (4%)

Query: 123 DEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLI 182
           D   + TI++ L + G +  AY        +  H +LD  +     +  SI      +  
Sbjct: 10  DVVSYNTIIDGLFKEGDVDKAY--------ITYHEMLDRRVSPDAVTYNSI------IAA 55

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
            +K   +++ + V   M+    +P+    N I+     +G S KA  ++R M   GI+P 
Sbjct: 56  LSKAQAMDRAMEVLTVMV----MPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPD 111

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           +VTYN+++D  CK G+  EA ++   M  RG  P+  TY  L+ G++  G L +   L+ 
Sbjct: 112 VVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLA 171

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M++ G+++  H +N +IC Y+++  + E + +  +M  +G+ P    Y  +I GLCK G
Sbjct: 172 LMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLG 231

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           R+ DA   F +M+ K + P+++ Y +L++  C      +A  L  E+  + + P +V +N
Sbjct: 232 RLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFN 291

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           T++D LC+ G +  +++L + + + G+ PDVITY+ +++G C  G +  A +    M+  
Sbjct: 292 TILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSV 351

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
           GL+PD   Y+T I G  K+    +A  L +EM + G  PD+ITYN+++HGL +      A
Sbjct: 352 GLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAA 411

Query: 543 NELLRKMVGDGFIPDHITYTSII 565
            EL  ++   G   +  TY  I+
Sbjct: 412 KELYARITESGTQLELSTYNIIL 434



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 111/357 (31%), Positives = 189/357 (52%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           Y      E+ + +F KM  +G+ PDV   N ++  L  NG   +AR+++  M + G+KP 
Sbjct: 87  YCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPD 146

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           I TY T+L  +  +G + E  +LL  M   G   +   +N+LI  +++  ++++   +  
Sbjct: 147 ITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFS 206

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
            M + GL  +A +Y  +I G  + G L +A+   E+M+ +G+ P +  Y  LI+ LC + 
Sbjct: 207 KMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYD 266

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
           +   A    FE+L + + P+I+ +NT+L   C+ G + E+  LFD L    + P V+TY+
Sbjct: 267 KWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYS 326

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
           TLIDG C  G ++ A +L   M++ G+ PD +TY+ ++NG CK+  +  A   F EM   
Sbjct: 327 TLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESN 386

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSL 539
           G+ PD   Y   + G  +   T+ A  L   +   G   +L TYN+++    K  SL
Sbjct: 387 GVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIILMDFAKTNSL 443


>gi|356497979|ref|XP_003517833.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 595

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 143/499 (28%), Positives = 247/499 (49%)

Query: 173 IKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYR 232
           +K  +LL  I  K       + +   M   G+ P+V   N +I  L     +V    V  
Sbjct: 78  VKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVPTHNIVINCLCRLNHTVFGFSVLG 137

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
           +M + G++PSIVT+ T+++  C EG + +A+  +  ++  G   +  T   +I G  + G
Sbjct: 138 LMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVG 197

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
               A   ++ M +    +   +YN ++ G  + G++ EA +L  +M  +G+ P L TYN
Sbjct: 198 HSSAALSYLKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPDLFTYN 257

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
            LI+GLC + R  +A      M+RK ++PD+ ++N +   + ++G I  A  +F  +   
Sbjct: 258 CLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMISRAKSIFSFMGHM 317

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
            +   VVTY+++I   C    ++ A ++ + MI +G LP+++TYT +++G C++ N++ A
Sbjct: 318 GIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKA 377

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
             F  EM+  GL P+   + T I G  K G    A  L   M   G  PDL T  +++ G
Sbjct: 378 MYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDG 437

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           L K     EA  L R++       D I Y+ I++     G L    +LF+ +  KG+   
Sbjct: 438 LFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKID 497

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
           +VTY ++I+     G L+ A     +M+  G  P+  TYN  + GL R   I ++    +
Sbjct: 498 VVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLM 557

Query: 653 DMEEEGILPNKYTYTILIN 671
            M+ +G   N  T  +LIN
Sbjct: 558 FMKGKGFRANATTTKLLIN 576



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 132/482 (27%), Positives = 236/482 (48%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           V+  L  ++KM+     P VK+ N +  ++        A  + + M   G+KP++ T+N 
Sbjct: 59  VDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVPTHNI 118

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +++  C+         +L  M   G  P+ VT+  ++ G    G + QA   +  +  +G
Sbjct: 119 VINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMG 178

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
            +   ++   II G  + G    AL+  ++M  +     +  YN ++ GLCK G V +A 
Sbjct: 179 YESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAW 238

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
             F +M  K + PD+ +YN L++G C      EA  L   +  + ++P V T+N +    
Sbjct: 239 DLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRF 298

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
            + G +  A+ +   M + GI  DV+TY+ ++   C +  +  A E F+ M+RKG  P+ 
Sbjct: 299 LKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNI 358

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             YT+ I G  ++ + ++A     EM+  G  P+++T+N L+ G CK G    A EL   
Sbjct: 359 VTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFV 418

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M   G +PD  T   I+    +         LF  + +      ++ Y+++++   + G+
Sbjct: 419 MHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGK 478

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
           L  A   FS +  KG++ +V+TYN +INGLC+   +D A  L + MEE G  P++ TY +
Sbjct: 479 LNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNV 538

Query: 669 LI 670
            +
Sbjct: 539 FV 540



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 131/485 (27%), Positives = 234/485 (48%), Gaps = 12/485 (2%)

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A + Y  M      P +  +N +     K      A+ L+  M   G  PN  T+N++I 
Sbjct: 62  ALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVPTHNIVIN 121

Query: 287 GFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
              R         ++  M K+G++ S  ++  I+ G   +G + +A+   + +   G   
Sbjct: 122 CLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYES 181

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
              T   +I GLCK G  S A     +M  +N   D+ +YN ++ G C+ G + EA+ LF
Sbjct: 182 DRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDLF 241

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
            ++  + + P + TYN LI GLC +   + A  L  NM+ +GI+PDV T+ ++     K 
Sbjct: 242 SQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKT 301

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G +S A+  F+ M   G++ D   Y++ I     L    +A  + + M+ KG  P+++TY
Sbjct: 302 GMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTY 361

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
             L+HG C++ ++ +A   L +MV +G  P+ +T+ ++I    + G     ++LF  M +
Sbjct: 362 TSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHK 421

Query: 587 KGLSPTLVTYTVLI------HAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCR 640
            G  P L T  +++      H H+       A   F E++      ++I Y+ ++NG+C 
Sbjct: 422 HGQLPDLQTCAIILDGLFKCHFHSE------AMSLFRELEKMNSDLDIIIYSIILNGMCS 475

Query: 641 LRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCT 700
             +++ A  LF  +  +G+  +  TY I+IN  C  G   +A  L  +M +    PD CT
Sbjct: 476 SGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECT 535

Query: 701 HSALL 705
           ++  +
Sbjct: 536 YNVFV 540



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 118/392 (30%), Positives = 196/392 (50%)

Query: 214 IIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRG 273
           II  L   G S  A    + M E      +  YN ++D  CK+G + EA +L  +M G+G
Sbjct: 189 IINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDLFSQMTGKG 248

Query: 274 CSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEAL 333
             P+  TYN LI G       ++A  L+ +M++ G+     ++N I   + + G++  A 
Sbjct: 249 IQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMISRAK 308

Query: 334 NLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGY 393
           ++   M   G+   + TY+ +I   C   ++ DA   F  M+RK  +P+I++Y +L++G+
Sbjct: 309 SIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSLIHGW 368

Query: 394 CRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDV 453
           C   N+ +A     E+ +  L P +VT+NTLI G C+ G    A++L   M   G LPD+
Sbjct: 369 CEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQLPDL 428

Query: 454 ITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEE 513
            T  I+++G  K    S A   F E+ +     D   Y+  + G    G  ++A  L   
Sbjct: 429 QTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSY 488

Query: 514 MLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGD 573
           + +KG   D++TYN++++GLCK G L++A +LL KM  +G  PD  TY   +   L   +
Sbjct: 489 LSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYE 548

Query: 574 LRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAA 605
           + +       M  KG      T  +LI+  +A
Sbjct: 549 ISKSTKYLMFMKGKGFRANATTTKLLINYFSA 580



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 119/457 (26%), Positives = 212/457 (46%), Gaps = 2/457 (0%)

Query: 250 LDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGL 309
           LDS      +  AL+   +M      P    +N+L    ++      A  LI+ M  +G+
Sbjct: 50  LDSLRNVKSVDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGV 109

Query: 310 KVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH 369
           K +  ++N +I         V   ++   M   GV P++ T+  ++ GLC  G V+ A  
Sbjct: 110 KPNVPTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAI- 168

Query: 370 RFFEMLRK-NVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
           RF + L+      D  +   ++ G C+ G+   A     ++  +N    V  YN ++DGL
Sbjct: 169 RFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGL 228

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
           C+ G +  A  L   M  +GI PD+ TY  +++G C       A      M+RKG+ PD 
Sbjct: 229 CKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDV 288

Query: 489 FAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRK 548
             +       LK G  S A  +   M   G   D++TY+ ++   C L  +++A E+   
Sbjct: 289 QTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDL 348

Query: 549 MVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGR 608
           M+  G +P+ +TYTS+IH   E+ ++ +       M+  GL P +VT+  LI      G+
Sbjct: 349 MIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGK 408

Query: 609 LELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTI 668
              A   F  M   G  P++ T   +++GL +     +A  LF ++E+     +   Y+I
Sbjct: 409 PVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSI 468

Query: 669 LINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           ++N  C++G   +AL L+  +  + ++ D  T++ ++
Sbjct: 469 ILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMI 505



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 65/146 (44%)

Query: 579 DLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
           D ++ M+     P +  + +L    A       A      M   G++PNV T+N +IN L
Sbjct: 64  DFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVPTHNIVINCL 123

Query: 639 CRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDY 698
           CRL      + +   M + G+ P+  T+T ++N  C  GN  +A+R    + D   E D 
Sbjct: 124 CRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDR 183

Query: 699 CTHSALLLKQLDKDYKVHAVEYLESL 724
            T  A++       +   A+ YL+ +
Sbjct: 184 YTRGAIINGLCKVGHSSAALSYLKKM 209



 Score = 44.3 bits (103), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 56/127 (44%)

Query: 167 LSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVK 226
           ++S + I I  ++L        +   L +F+ +   G+  DV   N +I  L   G    
Sbjct: 457 MNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDD 516

Query: 227 AREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLIT 286
           A ++   M E G  P   TYN  +    +  E+ ++ + L  M+G+G   N  T  +LI 
Sbjct: 517 AEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLIN 576

Query: 287 GFSRNGE 293
            FS N E
Sbjct: 577 YFSANKE 583


>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 689

 Score =  229 bits (585), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 148/494 (29%), Positives = 243/494 (49%), Gaps = 3/494 (0%)

Query: 214 IIKVLRDNGFSVKAREVYRMMGE-FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGR 272
           +IK    N    +A +V++ M E FG +P I +YNT+L++F +  +  +   L    +  
Sbjct: 84  VIKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETA 143

Query: 273 GCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEA 332
           G +PN  TYNVLI    +  E E+ARG +  M K G K    SY+ +I   ++ G L +A
Sbjct: 144 GVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDA 203

Query: 333 LNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR-KNVIPDIISYNTLLY 391
           L L +EM  R VAP +  YNILI G  K      A   + ++L   +V P++ ++N ++ 
Sbjct: 204 LELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMIS 263

Query: 392 GYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILP 451
           G  + G + +   ++D ++       + TY++LI GLC  G+++ A+ +   ++ +    
Sbjct: 264 GLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFI 323

Query: 452 DVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQ 511
           DV+TY  M+ G C+ G +  + E +  M ++    +  +Y   I G L+ G   EA  + 
Sbjct: 324 DVVTYNTMLGGFCRCGKIKESLELWRIMEQRN-SVNIVSYNILIKGLLENGKIDEATMIW 382

Query: 512 EEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEM 571
             M AKG+  D  TY + +HGLC  G + +A  +++++   G   D   Y SII    + 
Sbjct: 383 RLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKK 442

Query: 572 GDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITY 631
             L    +L   M + G+         LI       RL  A +    M   G  P V++Y
Sbjct: 443 RRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSY 502

Query: 632 NALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLD 691
           N LI GLC   +  +A     +M E G+ P+  TY+IL+   C     + AL L+ + L 
Sbjct: 503 NILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQ 562

Query: 692 REIEPDYCTHSALL 705
             +EPD   H+ L+
Sbjct: 563 SGLEPDVMMHNILI 576



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 172/653 (26%), Positives = 291/653 (44%), Gaps = 53/653 (8%)

Query: 90  PELLVRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVET 149
           P+ ++++L +  + PR A   F      PG      V+  IL  L E+ ++     +VE 
Sbjct: 10  PKHVLKLL-KSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSEARMVTHVGRIVEL 68

Query: 150 VVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLR-NGLLPDV 208
           +         DV +               ++  Y K SM ++ L VF +M    G  P +
Sbjct: 69  IRSQECKCDEDVALS--------------VIKTYGKNSMPDRALDVFKRMREIFGCEPGI 114

Query: 209 KNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKE------------ 256
           ++ N ++    +    VK   ++      G+ P++ TYN ++   CK+            
Sbjct: 115 RSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNW 174

Query: 257 -----------------------GEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGE 293
                                  G++ +ALEL  EM  R  +P+   YN+LI GF +  +
Sbjct: 175 MWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKD 234

Query: 294 LEQARGLIRDMLK-LGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
            + A  L   +L+   +  +  ++N +I G S+ G + + L + + M        L TY+
Sbjct: 235 HKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYS 294

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSR 412
            LI+GLC  G V  A   F E++ +    D+++YNT+L G+CR G I E+  L+  +  R
Sbjct: 295 SLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQR 354

Query: 413 NLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMA 472
           N V  +V+YN LI GL   G ++ A  +   M  +G   D  TY I ++G C  G ++ A
Sbjct: 355 NSV-NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKA 413

Query: 473 REFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHG 532
                E+  KG   D +AY + I    K     EA  L +EM   G   +    N L+ G
Sbjct: 414 LGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGG 473

Query: 533 LCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPT 592
           L +   L +A+ L+R M  +G +P  ++Y  +I    E G           ML  GL P 
Sbjct: 474 LIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPD 533

Query: 593 LVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFI 652
           L TY++L+       ++ELA   + +    G+ P+V+ +N LI+GLC + ++D A  +  
Sbjct: 534 LKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMA 593

Query: 653 DMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
           +ME      N  TY  L+       +   A  ++  M    ++PD  +++ +L
Sbjct: 594 NMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTIL 646



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 135/536 (25%), Positives = 259/536 (48%), Gaps = 39/536 (7%)

Query: 172 SIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVY 231
           +++  ++L+ +  KK   E+     N M + G  PDV + + +I  L   G    A E++
Sbjct: 148 NLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELF 207

Query: 232 RMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWE--MQGRGCSPNGVTYNVLITGFS 289
             M E  + P +  YN ++D F KE + + A++L W+  ++     PN  T+N++I+G S
Sbjct: 208 DEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQL-WDKLLEDSSVYPNVKTHNIMISGLS 266

Query: 290 RNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLA 349
           + G ++    +   M +   +   ++Y+ +I G  ++G + +A ++  E+V R     + 
Sbjct: 267 KCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVV 326

Query: 350 TYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDEL 409
           TYN ++ G C+ G++ ++   +  M ++N + +I+SYN L+ G   +G I EA +++  +
Sbjct: 327 TYNTMLGGFCRCGKIKESLELWRIMEQRNSV-NIVSYNILIKGLLENGKIDEATMIWRLM 385

Query: 410 RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNL 469
            ++       TY   I GLC  G +  A  + + + ++G   DV  Y  +++  CK   L
Sbjct: 386 PAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRL 445

Query: 470 SMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVL 529
             A     EM + G++ +       I G ++    S+A  L   M   G  P +++YN+L
Sbjct: 446 EEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNIL 505

Query: 530 VHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGL 589
           + GLC+ G   EA+  +++M+ +G  PD  TY+ ++        +    +L++  L+ GL
Sbjct: 506 ICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGL 565

Query: 590 SPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK--------------------------- 622
            P ++ + +LIH   + G+L+ A    + M+ +                           
Sbjct: 566 EPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATV 625

Query: 623 --------GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILI 670
                   G++P++I+YN ++ GLC   R+  A   F D    GI P  YT+ IL+
Sbjct: 626 IWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILV 681



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 157/596 (26%), Positives = 271/596 (45%), Gaps = 43/596 (7%)

Query: 58  YKELIISTVEEKPWAFCNNRWVSDHFQAVVSDPEL-----LVRVLNRIREKPRIALRFFR 112
           Y  L+ + VE K W    + +   +F+     P L     L+++  + +E  + A  F  
Sbjct: 117 YNTLLNAFVEAKQWVKVESLFA--YFETAGVAPNLQTYNVLIKMSCKKKEFEK-ARGFLN 173

Query: 113 WVETQPGVKRDEFVFCTILEILIESGLLRSAY---------WVVETVVCVNMHGILDVLI 163
           W+  + G K D F + T++  L ++G L  A           V   V C N      +LI
Sbjct: 174 WM-WKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYN------ILI 226

Query: 164 GGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNG-LLPDVKNCNRIIKVLRDNG 222
            G                 + K+   +  + +++K+L +  + P+VK  N +I  L   G
Sbjct: 227 DG-----------------FLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCG 269

Query: 223 FSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYN 282
                 +++  M +   +  + TY++++   C EG + +A  +  E+  R    + VTYN
Sbjct: 270 RVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYN 329

Query: 283 VLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTR 342
            ++ GF R G+++++  L R M +    V+  SYN +I G  E G + EA  +   M  +
Sbjct: 330 TMLGGFCRCGKIKESLELWRIMEQRN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAK 388

Query: 343 GVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEA 402
           G A    TY I I+GLC  G V+ A     E+  K    D+ +Y +++   C+   + EA
Sbjct: 389 GYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEA 448

Query: 403 FLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
             L  E+    +       N LI GL R   L  A  L   M   G LP V++Y I++ G
Sbjct: 449 SNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICG 508

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPD 522
            C+ G    A  F  EML  GL+PD   Y+  + G  +      A  L  + L  G  PD
Sbjct: 509 LCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPD 568

Query: 523 LITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFN 582
           ++ +N+L+HGLC +G L++A  ++  M       + +TY +++    ++ D  R   ++ 
Sbjct: 569 VMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWG 628

Query: 583 NMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
            M + GL P +++Y  ++       R+  A  +F + +  GI P V T+N L+  +
Sbjct: 629 YMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILVRAV 684


>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
          Length = 1091

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 159/558 (28%), Positives = 272/558 (48%), Gaps = 37/558 (6%)

Query: 184  TKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSI 243
            +K S  ++ +  F+ M+ +G +PDV   N +I  L   G   +A +++  + E  I+P+ 
Sbjct: 497  SKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTN 556

Query: 244  VTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRD 303
             TYNT+L    +EG+++E ++LL EM      PN +TYN ++   S+NGE+  A  ++  
Sbjct: 557  GTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYS 616

Query: 304  MLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGR 363
            M + G      SYN ++ G  ++  L EA  +  +M  + +AP  AT   ++    K G 
Sbjct: 617  MTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQM-KKILAPDYATLCTILPSFVKNGL 675

Query: 364  VSDARHRFFE-MLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
            + +A H   E +L+     D  S+++L+ G  +   + ++    + + SR ++       
Sbjct: 676  MKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDFFLC 735

Query: 423  TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
             LI  LC++     A QL       G+     +Y  ++ G      + +A + F EM R 
Sbjct: 736  PLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRL 795

Query: 483  GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEA 542
            G  PD F Y   +    K     E  ++Q+EM  KG+    +TYN ++ GL K   LE+A
Sbjct: 796  GCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQA 855

Query: 543  NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNML----------------- 585
             +L   ++ +GF P   TY  ++   L+ G +    +LFN ML                 
Sbjct: 856  IDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNG 915

Query: 586  ------------------RKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
                               +G++P + +YT+LI      GRL     YF ++   G+ P+
Sbjct: 916  HRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPD 975

Query: 628  VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYK 687
            +I YN LI+GL +  RI++A  LF +M+++GI+PN YTY  LI     AG   EA ++Y+
Sbjct: 976  LIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYE 1035

Query: 688  EMLDREIEPDYCTHSALL 705
            E+L +  +P   T++AL+
Sbjct: 1036 ELLRKGWKPSVFTYNALI 1053



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 138/519 (26%), Positives = 267/519 (51%), Gaps = 2/519 (0%)

Query: 208 VKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLW 267
            ++CN +++++R +G      +V+ +M +  +K ++ T+ T+      EG ++ A   L 
Sbjct: 101 TESCNYMLELMRAHGRVGDMAQVFDLMQKQVVKTNVGTFATIFGGVGVEGGLRSAPVALP 160

Query: 268 EMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKG 327
            M+  G S N  TYN LI    ++G   +A  + + M++ G+  S  +Y+ ++  + +K 
Sbjct: 161 VMREAGMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKR 220

Query: 328 LLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYN 387
            +   L L  EM  RGV P + +Y I I  L +  R  +A H   +M      PD++++ 
Sbjct: 221 DVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHT 280

Query: 388 TLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQ 447
            ++   C +G + +A  +F ++++ +  P  VTY TL+D     GD +   ++   M+  
Sbjct: 281 VIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVAD 340

Query: 448 GILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEA 507
           G   ++++YT +V+  C++G +  A   F+EM  KG+ P++++Y + I+G LK      A
Sbjct: 341 GYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRA 400

Query: 508 YRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHA 567
             L   M A G  P+  T+ + ++   K G   +A +    M   G +PD     +++++
Sbjct: 401 LELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYS 460

Query: 568 SLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPN 627
               G L   + +F  +   G+SP  +TYT++I   +   + + A  +FS+M   G  P+
Sbjct: 461 LAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPD 520

Query: 628 VITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYK 687
           V+  N+LI+ L +  + ++A+ LF  ++E  I P   TY  L++     G  +E ++L +
Sbjct: 521 VLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLE 580

Query: 688 EMLDREIEPDYCTHSALLLKQLDKDYKVH-AVEYLESLT 725
           EM      P+  T++  +L  L K+ +V+ A++ L S+T
Sbjct: 581 EMTRTIYPPNLITYNT-VLDCLSKNGEVNCAIDMLYSMT 618



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 141/540 (26%), Positives = 257/540 (47%), Gaps = 26/540 (4%)

Query: 94  VRVLNRIREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCV 153
           V V   +R  P +AL   R    + G+  + + +  ++  L++SG    A  V +     
Sbjct: 146 VGVEGGLRSAP-VALPVMR----EAGMSLNAYTYNGLIYFLVKSGFDAEAMEVYK----- 195

Query: 154 NMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNR 213
                   ++  G+S   S++   +L++ + KK  V+  L + N+M   G+ P+V +   
Sbjct: 196 -------AMVEDGISP--SVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTI 246

Query: 214 IIKVLRDNGFSVKAREVYRMMGEF---GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQ 270
            I+VL   G + +  E Y ++G+    G KP +VT+  ++   C  G + +A  + W+M+
Sbjct: 247 CIRVL---GQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMK 303

Query: 271 GRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLV 330
                P+ VTY  L+     +G+ +    +   M+  G   +  SY  ++    + G + 
Sbjct: 304 ASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVD 363

Query: 331 EALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLL 390
           EAL + +EM  +G++P   +YN LI G  K      A   F  M      P+  ++   +
Sbjct: 364 EALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFI 423

Query: 391 YGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGIL 450
             Y +SG   +A   ++ ++S+ +VP V   N ++  L   G L +A+++   +   G+ 
Sbjct: 424 NYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVS 483

Query: 451 PDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRL 510
           PD ITYT+M+    K      A  FF++M+  G  PD  A  + I    K G  +EA++L
Sbjct: 484 PDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQL 543

Query: 511 QEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLE 570
             ++      P   TYN L+ GL + G ++E  +LL +M    + P+ ITY +++    +
Sbjct: 544 FHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSK 603

Query: 571 MGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVIT 630
            G++    D+  +M  KG +P L +Y  +++      RLE AF  F +M+ K + P+  T
Sbjct: 604 NGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMK-KILAPDYAT 662



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 143/550 (26%), Positives = 240/550 (43%), Gaps = 37/550 (6%)

Query: 212 NRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQG 271
           N +I  L  +GF  +A EVY+ M E GI PS+ TY+ ++ +F K+ ++   L LL EM+ 
Sbjct: 175 NGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEA 234

Query: 272 RG-----------------------------------CSPNGVTYNVLITGFSRNGELEQ 296
           RG                                   C P+ VT+ V+I      G L  
Sbjct: 235 RGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSD 294

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A+ +   M     K    +Y  ++    + G     + +   MV  G    + +Y  ++ 
Sbjct: 295 AKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVD 354

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
            LC+ GRV +A   F EM  K + P+  SYN+L+ G+ ++     A  LF+ + +    P
Sbjct: 355 ALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSP 414

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
              T+   I+   + G    A Q  E+M ++GI+PDV     ++      G L MA+  F
Sbjct: 415 NGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVF 474

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
            E+   G+ PD   YT  I    K     EA     +M+  G  PD++  N L+  L K 
Sbjct: 475 YELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKG 534

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G   EA +L  K+      P + TY +++      G ++    L   M R    P L+TY
Sbjct: 535 GKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITY 594

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEE 656
             ++   +  G +  A      M  KG  P++ +YN ++ GL +  R+++A+ +F  M++
Sbjct: 595 NTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKK 654

Query: 657 EGILPNKYTYTILINENCNAGNWQEALRLYKE-MLDREIEPDYCTHSALLLKQLDKDYKV 715
             + P+  T   ++      G  +EAL   KE +L      D  +  +L+   L K    
Sbjct: 655 I-LAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVE 713

Query: 716 HAVEYLESLT 725
            ++E+ E++ 
Sbjct: 714 KSIEFAENIA 723



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 134/511 (26%), Positives = 228/511 (44%), Gaps = 42/511 (8%)

Query: 233 MMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNG 292
           +M E G+  +  TYN ++    K G   EA+E+   M   G SP+  TY+VL+  F +  
Sbjct: 161 VMREAGMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKR 220

Query: 293 ELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYN 352
           +++    L+ +M   G+K + +SY   I    +     EA ++  +M   G  P + T+ 
Sbjct: 221 DVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHT 280

Query: 353 ILIYGLCKWGRVSDARHRFFEMLRKNVIPD------------------------------ 382
           ++I  LC  GR+SDA+  F++M   +  PD                              
Sbjct: 281 VIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVAD 340

Query: 383 -----IISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVA 437
                I+SY  ++   C+ G + EA  +FDE++ + + P   +YN+LI G  +    + A
Sbjct: 341 GYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRA 400

Query: 438 QQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTT---Q 494
            +L  +M   G  P+  T+ + +N   K G    A + +  M  KG+ PD  A       
Sbjct: 401 LELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYS 460

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           +AG  +LG    A R+  E+ A G  PD ITY +++    K    +EA      MV  G 
Sbjct: 461 LAGSGRLG---MAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGC 517

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
           +PD +   S+I    + G       LF+ +    + PT  TY  L+      G+++    
Sbjct: 518 VPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQ 577

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
              EM      PN+ITYN +++ L +   ++ A  +   M E+G  P+  +Y  ++    
Sbjct: 578 LLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLI 637

Query: 675 NAGNWQEALRLYKEMLDREIEPDYCTHSALL 705
                +EA R++ +M  + + PDY T   +L
Sbjct: 638 KEERLEEAFRMFCQM-KKILAPDYATLCTIL 667



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 145/502 (28%), Positives = 229/502 (45%), Gaps = 45/502 (8%)

Query: 175  ILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMM 234
            +LD L    +K   V   + +   M   G  PD+ + N ++  L       +  E +RM 
Sbjct: 597  VLDCL----SKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIK---EERLEEAFRMF 649

Query: 235  GEFG--IKPSIVTYNTMLDSFCKEGEMQEALELLWE-MQGRGCSPNGVTYNVLITGFSRN 291
             +    + P   T  T+L SF K G M+EAL  + E +   GC+ +  +++ L+ G  + 
Sbjct: 650  CQMKKILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKK 709

Query: 292  GELEQA---------RG----------LIRDMLK----------------LGLKVSAHSY 316
              +E++         RG          LIR + K                LG+ +   SY
Sbjct: 710  AGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSY 769

Query: 317  NPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLR 376
            N +I G  ++ L+  A +L  EM   G  P   TYN+++  + K  RV +      EM R
Sbjct: 770  NSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHR 829

Query: 377  KNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEV 436
            K      ++YNT++ G  +S  + +A  L+  L S    PT  TY  L+DGL + G +  
Sbjct: 830  KGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVD 889

Query: 437  AQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIA 496
            A+ L   M+  G  P+   Y I++NG    GN     + F +M+ +G+ PD  +YT  I 
Sbjct: 890  AENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILID 949

Query: 497  GELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIP 556
                 G  ++      ++   G  PDLI YN+L+ GL K   +EEA  L  +M   G IP
Sbjct: 950  TLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIP 1009

Query: 557  DHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYF 616
            +  TY S+I    + G       ++  +LRKG  P++ TY  LI  ++  G  + A+  +
Sbjct: 1010 NLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAYAAY 1069

Query: 617  SEMQVKGIRPNVITYNALINGL 638
             +M V G +PN  TY  L N L
Sbjct: 1070 GQMIVGGCQPNSSTYMQLPNQL 1091



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 129/466 (27%), Positives = 230/466 (49%), Gaps = 16/466 (3%)

Query: 100  IREKPRIALRFFRWVETQPGVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGIL 159
            I+E+ R+   F  + + +  +  D    CTIL   +++GL++ A           +H + 
Sbjct: 637  IKEE-RLEEAFRMFCQMKKILAPDYATLCTILPSFVKNGLMKEA-----------LHTVK 684

Query: 160  DVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCL-LVFNKMLRNGLLPDVKNCNRIIKVL 218
            + ++  G +  V       L+    KK+ VE+ +    N   R  LL D   C  +I+ L
Sbjct: 685  EYILKAGCN--VDKSSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDFFLC-PLIRHL 741

Query: 219  RDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNG 278
              +  +++A +++      G+     +YN+++     E  +  A +L  EM+  GC P+ 
Sbjct: 742  CKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDE 801

Query: 279  VTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEE 338
             TYN+++    ++  +E+   + ++M + G + +  +YN II G  +   L +A++L   
Sbjct: 802  FTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYN 861

Query: 339  MVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGN 398
            +++ G +PT  TY  L+ GL K G++ DA + F EML     P+   YN LL G+  +GN
Sbjct: 862  LMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGN 921

Query: 399  IGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTI 458
                  LF+++  + + P + +Y  LID LC  G L         +   G+ PD+I Y +
Sbjct: 922  TENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNL 981

Query: 459  MVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKG 518
            +++G  K   +  A   FNEM +KG+ P+ + Y + I    K G  +EA ++ EE+L KG
Sbjct: 982  LIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKG 1041

Query: 519  FPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSI 564
            + P + TYN L+ G    GS + A     +M+  G  P+  TY  +
Sbjct: 1042 WKPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGGCQPNSSTYMQL 1087



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/355 (23%), Positives = 149/355 (41%), Gaps = 36/355 (10%)

Query: 383 IISYNTLLYGYCRSGNIGEAFLLFDEL-RSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLK 441
           ++  +++++    + +  EA  LF    R    V T  + N +++ +  +G +    Q+ 
Sbjct: 65  VVGTDSVVHMLRSAPDPAEALELFTAAARQPTKVHTTESCNYMLELMRAHGRVGDMAQVF 124

Query: 442 ENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKL 501
           + M  Q +  +V T+  +  G    G L  A      M   G+  + + Y   I   +K 
Sbjct: 125 DLMQKQVVKTNVGTFATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYTYNGLIYFLVKS 184

Query: 502 GDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITY 561
           G  +EA  + + M+  G  P + TY+VL+    K   ++    LL +M   G  P+  +Y
Sbjct: 185 GFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSY 244

Query: 562 TSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQV 621
           T  I    +         +   M   G  P +VT+TV+I      GRL  A   F +M+ 
Sbjct: 245 TICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKA 304

Query: 622 KGIRP-----------------------------------NVITYNALINGLCRLRRIDQ 646
              +P                                   N+++Y A+++ LC++ R+D+
Sbjct: 305 SDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDE 364

Query: 647 AYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTH 701
           A  +F +M+E+G+ P +Y+Y  LI+    A  +  AL L+  M      P+  TH
Sbjct: 365 ALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTH 419


>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
          Length = 578

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 127/381 (33%), Positives = 200/381 (52%), Gaps = 3/381 (0%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
            F   LR  + PD+   N +I  L   G   KA +V + +  +G+ PS+ TYN+++D +C
Sbjct: 178 AFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYC 237

Query: 255 KEG---EMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKV 311
           K+G    M     LL EM   G SP  VT+ VLI G+ +N     A  +  +M + G+  
Sbjct: 238 KKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAA 297

Query: 312 SAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRF 371
           S  +YN +I G   +G + E + L EEM   G++P   T+  ++ G CK G ++DA    
Sbjct: 298 SVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWI 357

Query: 372 FEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRY 431
             M  +NV PD++ Y  L+ GY R G + +A  + + +  + + P V TYN LI G  R 
Sbjct: 358 DGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRS 417

Query: 432 GDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAY 491
           GD   A  L + M  +GI  DV+TY +++   C  G +  A +  +EM   GL+P+   Y
Sbjct: 418 GDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTY 477

Query: 492 TTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVG 551
            T I G    G+   AY ++  M       +++TYNV +   C++G ++EAN+LL +M+ 
Sbjct: 478 NTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLD 537

Query: 552 DGFIPDHITYTSIIHASLEMG 572
              +P+ ITY +I    +E G
Sbjct: 538 KCLVPNGITYETIKEGMMEKG 558



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 211/397 (53%), Gaps = 3/397 (0%)

Query: 276 PNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNL 335
           P+  + N L+ G      ++ A    R  L+  +    +++N +I G    G L +A ++
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 336 EEEMVTRGVAPTLATYNILIYGLCKWGRVSDARH---RFFEMLRKNVIPDIISYNTLLYG 392
            +++   G+AP++ATYN LI G CK G   +  H      EM+   + P  +++  L+ G
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 393 YCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPD 452
           YC++ N   A  +F+E++ + +  +VVTYN+LI GLC  G +E   +L E M + G+ P+
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 453 VITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQE 512
            IT+  ++ G CK G ++ A ++ + M  + ++PD   YT  I G  +LG   +A  ++E
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKE 393

Query: 513 EMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMG 572
            M  KG  P++ TYN L+ G  + G    A+ LL +M   G   D +TY  +I A    G
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 573 DLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYN 632
           ++R+   L + M   GL P  +TY  +I     +G ++ A+   + M+    R NV+TYN
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYN 513

Query: 633 ALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTIL 669
             I   C++ ++D+A  L  +M ++ ++PN  TY  +
Sbjct: 514 VFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETI 550



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 122/402 (30%), Positives = 205/402 (50%), Gaps = 3/402 (0%)

Query: 240 KPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARG 299
           +PS  + N +L        +  A +       R  SP+  T+N +I+G  R G+L +A  
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 300 LIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLE---EEMVTRGVAPTLATYNILIY 356
           + +D+   GL  S  +YN +I GY +KG      +++   +EMV  G++PT  T+ +LI 
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           G CK    + A   F EM ++ +   +++YN+L+ G C  G + E   L +E+    L P
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
             +T+  ++ G C+ G +  A    + M  + + PDV+ YTI+++G  ++G +  A    
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVK 392

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKL 536
             M +KG+ P+   Y   I G  + GD   A  L +EM  KG   D++TYNVL+  LC  
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCK 452

Query: 537 GSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTY 596
           G + +A +LL +M   G  P+H+TY +II    + G+++   ++   M +      +VTY
Sbjct: 453 GEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTY 512

Query: 597 TVLIHAHAARGRLELAFMYFSEMQVKGIRPNVITYNALINGL 638
            V I      G+++ A    +EM  K + PN ITY  +  G+
Sbjct: 513 NVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGM 554



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 128/441 (29%), Positives = 219/441 (49%), Gaps = 11/441 (2%)

Query: 175 ILDLLLLIYTKKSMVEQCLLVFNKMLRNG-----LLPDVKNCNRIIKVLRDNGFSVKARE 229
           I D+L+L   + S   Q L  ++  L  G       P   + N ++  L        A +
Sbjct: 121 IADMLVLALARAS---QPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEK 177

Query: 230 VYRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFS 289
            +R      + P I T+NT++   C+ G++++A ++  +++  G +P+  TYN LI G+ 
Sbjct: 178 AFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYC 237

Query: 290 RN---GELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAP 346
           +    G +     L+++M++ G+  +A ++  +I GY +      A+ + EEM  +G+A 
Sbjct: 238 KKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAA 297

Query: 347 TLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLF 406
           ++ TYN LI GLC  G+V +      EM    + P+ I++  +L G+C+ G + +A    
Sbjct: 298 SVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWI 357

Query: 407 DELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKM 466
           D +  RN+ P VV Y  LIDG  R G +E A  +KE M  +GI P+V TY  ++ G  + 
Sbjct: 358 DGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRS 417

Query: 467 GNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITY 526
           G+   A    +EM  KG++ D   Y   I      G+  +A +L +EM   G  P+ +TY
Sbjct: 418 GDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTY 477

Query: 527 NVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLR 586
           N ++ G C  G+++ A E+  +M       + +TY   I    ++G +    DL N ML 
Sbjct: 478 NTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLD 537

Query: 587 KGLSPTLVTYTVLIHAHAARG 607
           K L P  +TY  +      +G
Sbjct: 538 KCLVPNGITYETIKEGMMEKG 558



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 126/406 (31%), Positives = 190/406 (46%), Gaps = 38/406 (9%)

Query: 346 PTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLL 405
           P+ ++ N L+ GL    RV  A   F   LR+ V PDI ++NT++ G CR G + +A  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 406 FDELRSRNLVPTVVTYNTLIDGLCR---YGDLEVAQQLKENMINQGILPDVITYTIMVNG 462
             ++++  L P+V TYN+LIDG C+    G++     L + M+  GI P  +T+ +++NG
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 463 SCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEM-------- 514
            CK  N + A   F EM ++G+      Y + I+G    G   E  +L EEM        
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 515 ------LAKGF---------------------PPDLITYNVLVHGLCKLGSLEEANELLR 547
                 + KGF                      PD++ Y +L+ G  +LG +E+A  +  
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKE 393

Query: 548 KMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARG 607
            M   G  P+  TY  +I      GD R    L + M  KG+   +VTY VLI A   +G
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 608 RLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYT 667
            +  A     EM   G+ PN +TYN +I G C    I  AY +   ME+     N  TY 
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYN 513

Query: 668 ILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDY 713
           + I   C  G   EA  L  EMLD+ + P+  T+  +    ++K Y
Sbjct: 514 VFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGY 559



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 193/407 (47%), Gaps = 33/407 (8%)

Query: 120 VKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLL 179
           V  D + F T++  L   G LR A  V + +               GL+   S+   + L
Sbjct: 187 VSPDIYTFNTVISGLCRIGQLRKAGDVAKDIK------------AWGLAP--SVATYNSL 232

Query: 180 LLIYTKKSMVEQCL---LVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGE 236
           +  Y KK          ++  +M+  G+ P       +I     N  +  A  V+  M +
Sbjct: 233 IDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQ 292

Query: 237 FGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQ 296
            GI  S+VTYN+++   C EG+++E ++L+ EM+  G SPN +T+  ++ GF + G +  
Sbjct: 293 QGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMAD 352

Query: 297 ARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIY 356
           A   I  M +  ++     Y  +I GY   G + +A+ ++E M  +G++P + TYN LI 
Sbjct: 353 ANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLIT 412

Query: 357 GLCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVP 416
           G  + G    A     EM  K +  D+++YN L+   C  G + +A  L DE+    L P
Sbjct: 413 GFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEP 472

Query: 417 TVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFF 476
             +TYNT+I G C  G+++ A +++  M       +V+TY + +   C++G +  A +  
Sbjct: 473 NHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLL 532

Query: 477 NEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDL 523
           NEML K L P+   Y T                ++E M+ KG+ PD+
Sbjct: 533 NEMLDKCLVPNGITYET----------------IKEGMMEKGYTPDI 563



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 163/349 (46%), Gaps = 39/349 (11%)

Query: 401 EAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMV 460
           +AFLL  E   R+  P+  + N L+ GL     +++A++   + + + + PD+ T+  ++
Sbjct: 140 DAFLLAGESHPRHR-PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVI 198

Query: 461 NGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAYR---LQEEMLAK 517
           +G C++G L  A +   ++   GL P    Y + I G  K G     Y    L +EM+  
Sbjct: 199 SGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEA 258

Query: 518 GFPPDLITYNVLVH-----------------------------------GLCKLGSLEEA 542
           G  P  +T+ VL++                                   GLC  G +EE 
Sbjct: 259 GISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEG 318

Query: 543 NELLRKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHA 602
            +L+ +M   G  P+ IT+  ++    + G +    D  + M  + + P +V YT+LI  
Sbjct: 319 VKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDG 378

Query: 603 HAARGRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPN 662
           +   G++E A      M  KGI PNV TYN LI G  R      A GL  +M+E+GI  +
Sbjct: 379 YRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEAD 438

Query: 663 KYTYTILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDK 711
             TY +LI   C  G  ++A++L  EM +  +EP++ T++ ++    DK
Sbjct: 439 VVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDK 487



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 119/250 (47%), Gaps = 14/250 (5%)

Query: 119 GVKRDEFVFCTILEILIESGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDL 178
           G+  +E  F  +L+   + G++  A   ++ +   N+    DV+I              +
Sbjct: 329 GLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEP--DVVI------------YTI 374

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFG 238
           L+  Y +   +E  + V   M + G+ P+V   N +I     +G    A  +   M E G
Sbjct: 375 LIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKG 434

Query: 239 IKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQAR 298
           I+  +VTYN ++ + C +GE+++A++LL EM   G  PN +TYN +I GF   G ++ A 
Sbjct: 435 IEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAY 494

Query: 299 GLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGL 358
            +   M K   + +  +YN  I  + + G + EA +L  EM+ + + P   TY  +  G+
Sbjct: 495 EIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGM 554

Query: 359 CKWGRVSDAR 368
            + G   D R
Sbjct: 555 MEKGYTPDIR 564



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 80/182 (43%), Gaps = 18/182 (9%)

Query: 137 SGLLRSAYWVVETVVCVNMHGILDVLIGGGLSSCVSIKILDLLLLIYTKKSMVEQCLLVF 196
           +G  RS  W        +  G+LD +   G+ +   +   ++L+     K  V + + + 
Sbjct: 412 TGFSRSGDWR-------SASGLLDEMKEKGIEA--DVVTYNVLIGALCCKGEVRKAVKLL 462

Query: 197 NKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFCKE 256
           ++M   GL P+    N II+   D G    A E+   M +   + ++VTYN  +  FC+ 
Sbjct: 463 DEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQI 522

Query: 257 GEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAHSY 316
           G+M EA +LL EM  +   PNG+TY  +  G    G     RG           VS  S 
Sbjct: 523 GKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPDIRGCT---------VSQASE 573

Query: 317 NP 318
           NP
Sbjct: 574 NP 575


>gi|449468277|ref|XP_004151848.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g14770, mitochondrial-like, partial [Cucumis
           sativus]
          Length = 697

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 161/537 (29%), Positives = 268/537 (49%), Gaps = 6/537 (1%)

Query: 189 VEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNT 248
           +E+ L ++ +M+ +G+ PDV     I+  L  +G   + + + R MG+ G+  + V+Y  
Sbjct: 5   LEEALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTI 64

Query: 249 MLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLG 308
           +LD+  K G++ EAL  L  M  RG + + +   VLI G  ++G++++A  L  ++ +L 
Sbjct: 65  LLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLN 124

Query: 309 LKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDAR 368
           L  +  +Y+ +I G  + G +  A +   EM  +   P + TY+ LI G  K G + DA 
Sbjct: 125 LVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAF 184

Query: 369 HRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGL 428
               +M+ KN +P+I +Y  LL G  ++G    A  L+ +++   L   V   +  ++ +
Sbjct: 185 KVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNM 244

Query: 429 CRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDR 488
            R G +E A++L   M + G+ PD++ YT +++G  K G +S A     EM  K +  D 
Sbjct: 245 KRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDI 304

Query: 489 FAYTTQIAGELKLG--DTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELL 546
             +   I    KLG  DT   Y    EM   G  PDL TYN +++G  K G+   A EL 
Sbjct: 305 VTFNVLINCLFKLGKSDTESIYSAMREM---GLSPDLATYNTMLNGNFKKGNWTSALELW 361

Query: 547 RKMVGDGFIPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAAR 606
            +M     IP+ IT   +I+   E G +    D+   M+  GL PT  TY +L++  +  
Sbjct: 362 NEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKS 421

Query: 607 GRLELAFMYFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTY 666
            R +        +    ++ +   YN LI+ LC+L    +A  +  DMEE GI+ +  TY
Sbjct: 422 RRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTY 481

Query: 667 TILINENCNAGNWQEALRLYKEMLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLES 723
             LI+  C + + + A   Y  ML   + PD  T++ LLL  L K   +H  + L S
Sbjct: 482 NALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYN-LLLGGLSKAGLIHEADDLLS 537



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 152/563 (26%), Positives = 263/563 (46%), Gaps = 36/563 (6%)

Query: 178 LLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEF 237
           +LL    K   V + L+    M+  G   DV  C  +I  L  +G   +A  ++  + + 
Sbjct: 64  ILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQL 123

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
            + P+ +TY+ ++D  CK G++  A   L EM+ + C PN +TY+ LI G+ + G L  A
Sbjct: 124 NLVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDA 183

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             ++R M+      +  +Y  ++ G  + G    AL+L  +M   G+   +   +  +  
Sbjct: 184 FKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNN 243

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPT 417
           + + GR+ +A     +M    + PD+++Y  L+ G+ +SG +  A  L  E+ S+N+V  
Sbjct: 244 MKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFD 303

Query: 418 VVTYNTLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFN 477
           +VT+N LI+ L + G  +  + +   M   G+ PD+ TY  M+NG+ K GN + A E +N
Sbjct: 304 IVTFNVLINCLFKLGKSDT-ESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWN 362

Query: 478 EMLRKGLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLIT------------ 525
           EM  + L P+       I G  + G    A  + +EM+  G  P   T            
Sbjct: 363 EMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSR 422

Query: 526 -----------------------YNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYT 562
                                  YN+L+  LCKLG   +A  +L+ M   G I D  TY 
Sbjct: 423 RADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYN 482

Query: 563 SIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVK 622
           ++IH       L+R    ++ ML + +SP + TY +L+   +  G +  A    SE++ +
Sbjct: 483 ALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKR 542

Query: 623 GIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEA 682
           G+ PN  TY  L+ G C++R   +   ++ +M  +G +P    Y +LI      G  ++A
Sbjct: 543 GLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQA 602

Query: 683 LRLYKEMLDREIEPDYCTHSALL 705
             L  EM  + + P   T+  L+
Sbjct: 603 KELMNEMQTKGVSPTCTTYDILI 625



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 154/522 (29%), Positives = 244/522 (46%), Gaps = 13/522 (2%)

Query: 195 VFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPSIVTYNTMLDSFC 254
             ++M     +P+V   + +I      G    A +V R M      P+I TY  +LD   
Sbjct: 151 ALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSF 210

Query: 255 KEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIRDMLKLGLKVSAH 314
           K G    AL+L  +M+  G   N    +  +    R+G +E+A  L+  M   GLK    
Sbjct: 211 KAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLV 270

Query: 315 SYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEM 374
           +Y  ++ G+ + G +  ALNL +EM ++ V   + T+N+LI  L K G+ SD    +  M
Sbjct: 271 NYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGK-SDTESIYSAM 329

Query: 375 LRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDL 434
               + PD+ +YNT+L G  + GN   A  L++E++SR L+P  +T N +I+GLC  G +
Sbjct: 330 REMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRM 389

Query: 435 EVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQ 494
           E A  + + M+  G+ P   TY I++N S K        +    ++   L+ D+  Y   
Sbjct: 390 ENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNIL 449

Query: 495 IAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGF 554
           I+   KLG T +A  + ++M  +G   D  TYN L+HG C    L+ A      M+ +  
Sbjct: 450 ISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERV 509

Query: 555 IPDHITYTSIIHASLEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFM 614
            PD  TY  ++    + G +    DL + + ++GL P   TY  L+  H      +    
Sbjct: 510 SPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLR 569

Query: 615 YFSEMQVKGIRPNVITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENC 674
            + EM +KG  P    YN LI    ++ ++ QA  L  +M+ +G+ P   TY ILI   C
Sbjct: 570 IYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKGVSPTCTTYDILICGWC 629

Query: 675 N------------AGNWQEALRLYKEMLDREIEPDYCTHSAL 704
           N                 EA RL+ EM DR   P   T + +
Sbjct: 630 NLLKMPDLGSTLKISYRAEAKRLFIEMNDRGFVPCESTQACI 671



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 205/398 (51%), Gaps = 1/398 (0%)

Query: 329 LVEALNLEEEMVTRGVAPTLATYNILIYGLCKWGRVSDARHRFFEMLRKNVIPDIISYNT 388
           L EAL L EEMV  G+ P + T+  ++YGLCK G++S+ +    EM +  +  + +SY  
Sbjct: 5   LEEALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTI 64

Query: 389 LLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYNTLIDGLCRYGDLEVAQQLKENMINQG 448
           LL    ++G + EA +    +  R     V+    LIDGL + G ++ A+ L  N+    
Sbjct: 65  LLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLN 124

Query: 449 ILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRKGLQPDRFAYTTQIAGELKLGDTSEAY 508
           ++P+ ITY+ +++G CK+G+++ A    +EM  K   P+   Y++ I G +K G   +A+
Sbjct: 125 LVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAF 184

Query: 509 RLQEEMLAKGFPPDLITYNVLVHGLCKLGSLEEANELLRKMVGDGFIPDHITYTSIIHAS 568
           ++  +M+ K   P++ TY +L+ G  K G  + A +L  KM   G   +     + ++  
Sbjct: 185 KVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNM 244

Query: 569 LEMGDLRRGRDLFNNMLRKGLSPTLVTYTVLIHAHAARGRLELAFMYFSEMQVKGIRPNV 628
              G +    +L   M   GL P LV YT L+      G++  A     EM  K +  ++
Sbjct: 245 KRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDI 304

Query: 629 ITYNALINGLCRLRRIDQAYGLFIDMEEEGILPNKYTYTILINENCNAGNWQEALRLYKE 688
           +T+N LIN L +L + D    ++  M E G+ P+  TY  ++N N   GNW  AL L+ E
Sbjct: 305 VTFNVLINCLFKLGKSDTE-SIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNE 363

Query: 689 MLDREIEPDYCTHSALLLKQLDKDYKVHAVEYLESLTL 726
           M  R++ P+  T + ++    +     +A++ L+ + L
Sbjct: 364 MKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVL 401



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/394 (30%), Positives = 186/394 (47%), Gaps = 13/394 (3%)

Query: 183 YTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREVYRMMGEFGIKPS 242
           + K   V   L +  +M    ++ D+   N +I  L   G S     +Y  M E G+ P 
Sbjct: 279 FLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGKS-DTESIYSAMREMGLSPD 337

Query: 243 IVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQARGLIR 302
           + TYNTML+   K+G    ALEL  EM+ R   PN +T N++I G    G +E A  +++
Sbjct: 338 LATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILK 397

Query: 303 DMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYGLCKWG 362
           +M+ +GL  ++ +Y  ++   S+       L   E +V   +      YNILI  LCK G
Sbjct: 398 EMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLG 457

Query: 363 RVSDARHRFFEMLRKNVIPDIISYNTLLYGYCRSGNIGEAFLLFDELRSRNLVPTVVTYN 422
               A     +M  + +I D  +YN L++GYC S ++  AF+ +  + S  + P + TYN
Sbjct: 458 MTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYN 517

Query: 423 TLIDGLCRYGDLEVAQQLKENMINQGILPDVITYTIMVNGSCKMGNLSMAREFFNEMLRK 482
            L+ GL + G +  A  L   +  +G++P+  TY  ++ G CK+ N       + EM+ K
Sbjct: 518 LLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIK 577

Query: 483 GLQPDRFAYTTQIAGELKLGDTSEAYRLQEEMLAKGFPPDLITYNVLVHGLCK------L 536
           G  P   AY   I    K+G   +A  L  EM  KG  P   TY++L+ G C       L
Sbjct: 578 GFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKGVSPTCTTYDILICGWCNLLKMPDL 637

Query: 537 GSL------EEANELLRKMVGDGFIPDHITYTSI 564
           GS        EA  L  +M   GF+P   T   I
Sbjct: 638 GSTLKISYRAEAKRLFIEMNDRGFVPCESTQACI 671



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 120/251 (47%), Gaps = 13/251 (5%)

Query: 179 LLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNC-NRIIKVLRDNGFSVKAREVYRMMGEF 237
           +LL  + KS     +L  +++L N  L   K+  N +I  L   G + KA  V + M E 
Sbjct: 413 ILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEER 472

Query: 238 GIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSRNGELEQA 297
           GI     TYN ++  +C    ++ A      M     SP+  TYN+L+ G S+ G + +A
Sbjct: 473 GIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEA 532

Query: 298 RGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLATYNILIYG 357
             L+ ++ K GL  +A +Y  ++CG+ +     E L +  EMV +G  P    YN+LI  
Sbjct: 533 DDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGY 592

Query: 358 LCKWGRVSDARHRFFEMLRKNVIPDIISYNTLLYGYC---RSGNIG---------EAFLL 405
             K G++  A+    EM  K V P   +Y+ L+ G+C   +  ++G         EA  L
Sbjct: 593 FSKMGKMKQAKELMNEMQTKGVSPTCTTYDILICGWCNLLKMPDLGSTLKISYRAEAKRL 652

Query: 406 FDELRSRNLVP 416
           F E+  R  VP
Sbjct: 653 FIEMNDRGFVP 663



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 100/223 (44%), Gaps = 12/223 (5%)

Query: 171 VSIKILDLLLLIYTKKSMVEQCLLVFNKMLRNGLLPDVKNCNRIIKVLRDNGFSVKAREV 230
           V   + ++L+    K  M  +   V   M   G++ D    N +I     +    +A   
Sbjct: 441 VDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMT 500

Query: 231 YRMMGEFGIKPSIVTYNTMLDSFCKEGEMQEALELLWEMQGRGCSPNGVTYNVLITGFSR 290
           Y  M    + P I TYN +L    K G + EA +LL E++ RG  PN  TY  L+ G  +
Sbjct: 501 YSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCK 560

Query: 291 NGELEQARGLIRDMLKLGLKVSAHSYNPIICGYSEKGLLVEALNLEEEMVTRGVAPTLAT 350
               ++   +  +M+  G      +YN +I  +S+ G + +A  L  EM T+GV+PT  T
Sbjct: 561 VRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKGVSPTCTT 620

Query: 351 YNILIYGLCKWGRVSD------------ARHRFFEMLRKNVIP 381
           Y+ILI G C   ++ D            A+  F EM  +  +P
Sbjct: 621 YDILICGWCNLLKMPDLGSTLKISYRAEAKRLFIEMNDRGFVP 663


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.323    0.140    0.419 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,358,901,243
Number of Sequences: 23463169
Number of extensions: 481637080
Number of successful extensions: 1415414
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9638
Number of HSP's successfully gapped in prelim test: 3648
Number of HSP's that attempted gapping in prelim test: 1041049
Number of HSP's gapped (non-prelim): 104737
length of query: 729
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 579
effective length of database: 8,839,720,017
effective search space: 5118197889843
effective search space used: 5118197889843
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 81 (35.8 bits)